Query 006922
Match_columns 625
No_of_seqs 560 out of 5064
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 12:31:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006922.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006922hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gt4_A Tyrosine-protein kinase 100.0 1.3E-54 4.5E-59 443.1 17.9 249 330-598 32-305 (308)
2 4aoj_A High affinity nerve gro 100.0 3.1E-54 1E-58 444.5 18.9 251 330-600 47-320 (329)
3 4asz_A BDNF/NT-3 growth factor 100.0 1.4E-54 4.9E-59 440.9 16.1 250 330-599 19-289 (299)
4 3omv_A RAF proto-oncogene seri 100.0 6.8E-53 2.3E-57 428.7 21.0 249 329-599 41-300 (307)
5 3hmm_A TGF-beta receptor type- 100.0 7.6E-53 2.6E-57 430.8 13.0 261 330-601 9-299 (303)
6 4fih_A Serine/threonine-protei 100.0 1.6E-51 5.5E-56 423.8 18.3 239 330-592 80-323 (346)
7 4b9d_A Serine/threonine-protei 100.0 2.1E-51 7.2E-56 423.6 17.8 241 329-592 29-276 (350)
8 4g3f_A NF-kappa-beta-inducing 100.0 1.9E-51 6.6E-56 422.0 16.3 244 330-600 64-317 (336)
9 3fpq_A Serine/threonine-protei 100.0 1.8E-50 6.1E-55 407.9 21.8 241 330-592 32-282 (290)
10 4ase_A Vascular endothelial gr 100.0 4.4E-51 1.5E-55 424.3 14.5 253 329-600 69-348 (353)
11 4fie_A Serine/threonine-protei 100.0 2.7E-50 9.3E-55 424.8 19.5 239 330-592 157-400 (423)
12 4aw0_A HPDK1, 3-phosphoinositi 100.0 1.6E-50 5.6E-55 410.2 14.0 237 329-591 37-283 (311)
13 3hyh_A Carbon catabolite-derep 100.0 1.1E-49 3.6E-54 398.8 18.6 236 330-592 19-262 (275)
14 3ubd_A Ribosomal protein S6 ki 100.0 7.7E-50 2.6E-54 405.3 13.0 233 329-587 29-271 (304)
15 4g31_A Eukaryotic translation 100.0 1.8E-47 6E-52 389.3 19.5 239 330-592 11-279 (299)
16 4b99_A Mitogen-activated prote 100.0 1.5E-45 5.2E-50 389.3 19.2 254 330-592 60-344 (398)
17 4f9c_A Cell division cycle 7-r 100.0 2.3E-44 8E-49 376.1 19.6 187 330-528 27-251 (361)
18 2qkw_B Protein kinase; three-h 100.0 2E-43 6.8E-48 365.1 23.8 266 330-600 45-316 (321)
19 3v5w_A G-protein coupled recep 100.0 3.3E-44 1.1E-48 395.0 18.4 240 330-592 195-449 (689)
20 3uto_A Twitchin; kinase, muscl 100.0 8.2E-44 2.8E-48 394.1 18.6 243 329-592 162-410 (573)
21 3uim_A Brassinosteroid insensi 100.0 5.8E-43 2E-47 362.3 18.3 271 329-601 35-313 (326)
22 3soc_A Activin receptor type-2 100.0 2.4E-43 8.1E-48 364.7 14.8 255 330-599 30-318 (322)
23 2izr_A Casein kinase I isoform 100.0 1.9E-42 6.6E-47 359.2 20.5 270 330-619 15-301 (330)
24 4hcu_A Tyrosine-protein kinase 100.0 1.1E-42 3.9E-47 349.9 18.2 247 330-600 16-267 (269)
25 3p86_A Serine/threonine-protei 100.0 1.3E-42 4.5E-47 356.9 18.7 253 329-601 42-300 (309)
26 2psq_A Fibroblast growth facto 100.0 2.7E-42 9.3E-47 363.7 20.0 251 329-599 86-364 (370)
27 3kul_A Ephrin type-A receptor 100.0 1.2E-42 4E-47 360.0 15.9 251 329-603 54-317 (325)
28 3s95_A LIMK-1, LIM domain kina 100.0 2.9E-42 9.8E-47 354.5 18.2 246 330-600 16-283 (310)
29 1k9a_A Carboxyl-terminal SRC k 100.0 4.3E-42 1.5E-46 371.6 20.5 247 329-600 198-446 (450)
30 3sxs_A Cytoplasmic tyrosine-pr 100.0 3.9E-42 1.4E-46 345.7 18.5 248 330-601 14-266 (268)
31 1qcf_A Haematopoetic cell kina 100.0 2.3E-42 8E-47 374.2 17.7 247 330-600 194-445 (454)
32 3fxz_A Serine/threonine-protei 100.0 6.1E-42 2.1E-46 350.0 19.3 239 330-592 26-269 (297)
33 2qol_A Ephrin receptor; recept 100.0 1.1E-42 3.7E-47 367.0 13.5 247 330-600 51-310 (373)
34 3cbl_A C-FES, proto-oncogene t 100.0 1.4E-42 4.9E-47 366.9 14.3 247 329-599 119-374 (377)
35 2c30_A Serine/threonine-protei 100.0 2.6E-41 9E-46 349.2 22.9 238 331-592 52-294 (321)
36 3fe3_A MAP/microtubule affinit 100.0 8.3E-42 2.8E-46 353.7 19.0 237 330-592 21-264 (328)
37 3gen_A Tyrosine-protein kinase 100.0 6.3E-42 2.1E-46 347.1 17.5 247 330-600 30-281 (283)
38 1opk_A P150, C-ABL, proto-onco 100.0 5.6E-42 1.9E-46 375.0 17.8 249 329-600 225-479 (495)
39 3kex_A Receptor tyrosine-prote 100.0 4.2E-42 1.4E-46 355.8 15.5 247 330-601 19-278 (325)
40 2eva_A TAK1 kinase - TAB1 chim 100.0 1.7E-41 5.8E-46 348.4 19.3 252 330-602 14-266 (307)
41 3zgw_A Maternal embryonic leuc 100.0 1.2E-41 4.3E-46 354.6 17.7 237 330-592 16-260 (347)
42 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 9.6E-42 3.3E-46 369.1 17.3 247 330-600 190-441 (452)
43 3poz_A Epidermal growth factor 100.0 6.6E-42 2.3E-46 354.7 14.7 246 330-600 21-279 (327)
44 3q4u_A Activin receptor type-1 100.0 2E-41 6.7E-46 346.4 17.8 249 330-597 14-300 (301)
45 1csn_A Casein kinase-1; phosph 100.0 3.9E-41 1.3E-45 343.7 19.7 264 330-612 16-296 (298)
46 2nru_A Interleukin-1 receptor- 100.0 1.8E-40 6.2E-45 340.4 24.6 272 317-599 13-306 (307)
47 3tt0_A Basic fibroblast growth 100.0 1.9E-41 6.5E-46 359.0 17.3 255 330-604 75-357 (382)
48 3t9t_A Tyrosine-protein kinase 100.0 1.9E-41 6.6E-46 340.2 16.5 247 330-600 14-265 (267)
49 1o6l_A RAC-beta serine/threoni 100.0 5.7E-41 2E-45 348.5 20.6 237 330-592 11-260 (337)
50 3l9p_A Anaplastic lymphoma kin 100.0 1.5E-41 5.3E-46 357.5 16.4 252 330-601 77-347 (367)
51 1luf_A Muscle-specific tyrosin 100.0 2.4E-41 8.1E-46 352.6 16.5 252 330-601 53-337 (343)
52 3dtc_A Mitogen-activated prote 100.0 3E-41 1E-45 339.7 16.5 245 330-597 13-271 (271)
53 1tki_A Titin; serine kinase, m 100.0 2.5E-41 8.4E-46 349.3 16.2 242 330-592 11-257 (321)
54 3niz_A Rhodanese family protei 100.0 4.4E-41 1.5E-45 346.0 18.0 252 330-592 27-300 (311)
55 3op5_A Serine/threonine-protei 100.0 8.5E-41 2.9E-45 351.7 20.3 268 330-612 41-342 (364)
56 1fot_A TPK1 delta, CAMP-depend 100.0 8.1E-41 2.8E-45 344.8 19.6 237 330-592 12-258 (318)
57 4eqm_A Protein kinase; transfe 100.0 1.8E-40 6.1E-45 338.6 21.7 254 330-604 17-280 (294)
58 4f0f_A Serine/threonine-protei 100.0 1.6E-40 5.5E-45 337.5 21.0 247 330-597 25-287 (287)
59 2y0a_A Death-associated protei 100.0 8.7E-41 3E-45 346.1 19.4 242 329-592 16-271 (326)
60 2yab_A Death-associated protei 100.0 1.2E-40 4.1E-45 349.3 20.3 241 330-592 18-272 (361)
61 2h8h_A Proto-oncogene tyrosine 100.0 3.5E-41 1.2E-45 372.0 16.4 249 329-601 272-525 (535)
62 3ugc_A Tyrosine-protein kinase 100.0 3.4E-41 1.2E-45 343.9 15.0 254 330-600 16-292 (295)
63 2zv2_A Calcium/calmodulin-depe 100.0 1.1E-40 3.6E-45 340.8 18.6 238 330-592 19-292 (298)
64 1rdq_E PKA C-alpha, CAMP-depen 100.0 1E-40 3.6E-45 348.5 18.7 237 330-592 47-293 (350)
65 3qup_A Tyrosine-protein kinase 100.0 5.2E-41 1.8E-45 347.1 16.0 254 329-602 28-301 (323)
66 4euu_A Serine/threonine-protei 100.0 5.6E-40 1.9E-44 338.9 23.6 264 330-598 15-308 (319)
67 3lb7_A RAF proto-oncogene seri 100.0 2E-40 6.9E-45 340.4 20.1 251 329-601 41-302 (307)
68 3llt_A Serine/threonine kinase 100.0 3.5E-41 1.2E-45 354.0 14.6 256 330-592 41-355 (360)
69 1ob3_A PFPK5, cell division co 100.0 1.4E-40 4.7E-45 338.4 18.4 252 330-592 8-280 (288)
70 3tki_A Serine/threonine-protei 100.0 2E-40 6.8E-45 342.9 19.4 241 330-593 13-262 (323)
71 2ozo_A Tyrosine-protein kinase 100.0 1.4E-40 4.8E-45 372.5 19.7 245 331-600 343-599 (613)
72 2ivs_A Proto-oncogene tyrosine 100.0 8.3E-41 2.9E-45 343.9 16.4 251 329-599 28-311 (314)
73 3soa_A Calcium/calmodulin-depe 100.0 3.6E-40 1.2E-44 354.7 21.9 242 329-592 16-267 (444)
74 3c1x_A Hepatocyte growth facto 100.0 1.1E-40 3.9E-45 351.3 17.6 249 330-602 95-358 (373)
75 3vhe_A Vascular endothelial gr 100.0 4.5E-41 1.5E-45 352.8 14.5 252 329-599 27-355 (359)
76 3txo_A PKC-L, NPKC-ETA, protei 100.0 4.9E-41 1.7E-45 351.3 14.4 237 330-592 29-280 (353)
77 3kmu_A ILK, integrin-linked ki 100.0 1.6E-40 5.5E-45 334.0 17.6 247 330-599 16-270 (271)
78 3kfa_A Tyrosine-protein kinase 100.0 1.1E-40 3.8E-45 338.7 16.5 248 330-600 19-272 (288)
79 1mp8_A Focal adhesion kinase 1 100.0 1.2E-40 4.2E-45 337.4 16.7 246 329-599 20-276 (281)
80 1qpc_A LCK kinase; alpha beta 100.0 1.3E-40 4.5E-45 336.6 16.7 247 330-600 19-270 (279)
81 4dc2_A Protein kinase C IOTA t 100.0 3E-40 1E-44 349.6 19.7 240 329-587 57-307 (396)
82 4fr4_A YANK1, serine/threonine 100.0 4E-40 1.4E-44 347.5 20.3 241 329-592 20-271 (384)
83 1xjd_A Protein kinase C, theta 100.0 8.6E-41 3E-45 348.2 14.9 236 330-591 23-268 (345)
84 3uc3_A Serine/threonine-protei 100.0 1.9E-40 6.5E-45 348.4 17.6 244 330-593 26-275 (361)
85 3mdy_A Bone morphogenetic prot 100.0 2.8E-40 9.7E-45 343.4 18.7 258 329-601 42-333 (337)
86 2bdw_A Hypothetical protein K1 100.0 3.1E-40 1.1E-44 346.7 19.1 242 329-592 34-284 (362)
87 3c0i_A Peripheral plasma membr 100.0 3.2E-40 1.1E-44 345.4 19.1 245 329-592 29-286 (351)
88 1mqb_A Ephrin type-A receptor 100.0 2E-40 6.9E-45 344.4 17.1 248 330-601 50-311 (333)
89 2pmi_A Negative RE, cyclin-dep 100.0 3.5E-40 1.2E-44 340.2 18.5 263 329-598 10-301 (317)
90 4fvq_A Tyrosine-protein kinase 100.0 7.4E-41 2.5E-45 340.2 13.2 247 330-603 14-279 (289)
91 3h4j_B AMPK kdaid, SNF1-like p 100.0 2.4E-40 8E-45 343.6 17.1 236 330-592 15-258 (336)
92 1rjb_A FL cytokine receptor; k 100.0 2.5E-40 8.6E-45 345.1 17.4 256 329-603 50-338 (344)
93 4fl3_A Tyrosine-protein kinase 100.0 1.5E-40 5.2E-45 373.2 16.6 242 330-597 375-629 (635)
94 2x4f_A Myosin light chain kina 100.0 3E-40 1E-44 348.2 17.7 242 330-592 95-342 (373)
95 3uzp_A CKI-delta, CKID, casein 100.0 6.3E-40 2.2E-44 334.4 19.5 265 330-613 15-294 (296)
96 1u59_A Tyrosine-protein kinase 100.0 3.9E-40 1.3E-44 334.8 17.9 245 331-600 17-273 (287)
97 4hgt_A Casein kinase I isoform 100.0 3E-40 1E-44 336.6 16.8 265 329-612 14-293 (296)
98 1t46_A HOMO sapiens V-KIT hard 100.0 2.9E-40 9.7E-45 339.7 16.6 253 329-600 28-308 (313)
99 3v8s_A RHO-associated protein 100.0 1.4E-40 4.7E-45 354.1 14.7 240 330-592 75-329 (410)
100 2pvf_A Fibroblast growth facto 100.0 3.4E-40 1.2E-44 342.8 17.1 252 329-600 40-319 (334)
101 3a8x_A Protein kinase C IOTA t 100.0 7.4E-40 2.5E-44 341.5 19.6 239 330-587 15-264 (345)
102 3qd2_B Eukaryotic translation 100.0 8.2E-40 2.8E-44 338.9 19.8 238 330-592 12-325 (332)
103 3lzb_A Epidermal growth factor 100.0 3.4E-40 1.2E-44 341.8 16.7 246 330-600 21-279 (327)
104 1byg_A CSK, protein (C-termina 100.0 1.7E-40 5.7E-45 335.8 13.9 247 329-600 26-274 (278)
105 3kn6_A Ribosomal protein S6 ki 100.0 2E-40 7E-45 343.1 14.7 245 330-592 17-270 (325)
106 2jii_A Serine/threonine-protei 100.0 3.6E-40 1.2E-44 345.3 16.7 267 330-614 48-351 (352)
107 3a62_A Ribosomal protein S6 ki 100.0 8E-40 2.7E-44 339.0 19.1 237 330-592 23-276 (327)
108 2v62_A Serine/threonine-protei 100.0 1E-39 3.6E-44 340.7 19.7 255 330-600 43-329 (345)
109 1u5q_A Serine/threonine protei 100.0 5.4E-40 1.9E-44 343.0 17.5 239 330-593 60-306 (348)
110 1p4o_A Insulin-like growth fac 100.0 3.9E-40 1.3E-44 340.3 16.2 254 329-602 30-302 (322)
111 3o0g_A Cell division protein k 100.0 7.5E-40 2.6E-44 333.5 18.1 253 330-592 8-282 (292)
112 2i0e_A Protein kinase C-beta I 100.0 5.2E-40 1.8E-44 343.4 17.3 237 330-592 26-276 (353)
113 3pls_A Macrophage-stimulating 100.0 1.4E-39 4.8E-44 332.1 20.0 248 330-601 27-289 (298)
114 3g33_A Cell division protein k 100.0 1.1E-39 3.8E-44 334.9 19.3 253 330-592 15-296 (308)
115 3gxj_A TGF-beta receptor type- 100.0 1.4E-41 5E-46 347.6 5.1 253 330-602 9-300 (303)
116 3gni_B Strad alpha; kinase fol 100.0 7.5E-40 2.6E-44 347.6 18.1 262 330-599 31-342 (389)
117 1xbb_A Tyrosine-protein kinase 100.0 5.1E-40 1.7E-44 334.6 16.0 243 331-599 24-279 (291)
118 3og7_A AKAP9-BRAF fusion prote 100.0 9.4E-40 3.2E-44 332.3 17.9 249 330-600 30-289 (289)
119 4e5w_A Tyrosine-protein kinase 100.0 7.3E-40 2.5E-44 335.0 17.2 252 330-598 27-301 (302)
120 1nxk_A MAP kinase-activated pr 100.0 1E-39 3.5E-44 347.5 18.8 243 330-593 68-322 (400)
121 3brb_A Proto-oncogene tyrosine 100.0 1.6E-39 5.5E-44 334.4 19.3 251 329-599 39-308 (313)
122 4aw2_A Serine/threonine-protei 100.0 3.7E-40 1.3E-44 353.4 15.1 243 330-592 80-338 (437)
123 1kob_A Twitchin; kinase, intra 100.0 1.2E-39 4.1E-44 344.8 18.7 243 330-593 57-305 (387)
124 3ork_A Serine/threonine protei 100.0 4.1E-40 1.4E-44 338.7 14.8 249 330-600 18-282 (311)
125 3cc6_A Protein tyrosine kinase 100.0 8.2E-40 2.8E-44 331.3 16.6 245 330-599 18-273 (281)
126 3byv_A Rhoptry kinase; malaria 100.0 4.1E-41 1.4E-45 355.8 7.3 236 330-592 79-359 (377)
127 1fvr_A Tyrosine-protein kinase 100.0 8.1E-40 2.8E-44 338.9 16.9 254 329-602 30-303 (327)
128 3lxl_A Tyrosine-protein kinase 100.0 2.8E-40 9.6E-45 342.4 13.1 257 330-603 29-307 (327)
129 3lxp_A Non-receptor tyrosine-p 100.0 4.2E-40 1.4E-44 339.7 14.2 252 330-600 37-311 (318)
130 3e7e_A HBUB1, BUB1A, mitotic c 100.0 3.5E-39 1.2E-43 339.5 21.3 244 330-600 71-340 (365)
131 3fdn_A Serine/threonine-protei 100.0 1.5E-39 5.1E-44 329.0 17.6 237 330-592 15-257 (279)
132 4ejn_A RAC-alpha serine/threon 100.0 5.1E-40 1.7E-44 355.2 15.2 238 329-592 153-404 (446)
133 2y94_A 5'-AMP-activated protei 100.0 2.1E-39 7.2E-44 351.1 19.8 237 330-592 22-266 (476)
134 2w4o_A Calcium/calmodulin-depe 100.0 1.8E-39 6.2E-44 339.4 18.6 241 330-592 59-305 (349)
135 2r5t_A Serine/threonine-protei 100.0 6.8E-40 2.3E-44 344.9 15.5 237 329-591 43-288 (373)
136 3oz6_A Mitogen-activated prote 100.0 8.1E-40 2.8E-44 347.2 16.2 190 330-529 15-236 (388)
137 2eue_A Carbon catabolite derep 100.0 1.3E-39 4.6E-44 328.6 17.0 236 330-592 19-262 (275)
138 2i1m_A Macrophage colony-stimu 100.0 4.8E-40 1.7E-44 341.4 14.1 252 329-599 51-326 (333)
139 3sv0_A Casein kinase I-like; t 100.0 2.9E-39 1E-43 350.6 20.6 251 330-599 13-278 (483)
140 3kvw_A DYRK2, dual specificity 100.0 7.2E-40 2.5E-44 351.8 15.7 194 330-530 103-305 (429)
141 4agu_A Cyclin-dependent kinase 100.0 1.4E-39 4.8E-44 334.4 17.2 255 330-592 9-284 (311)
142 3g2f_A Bone morphogenetic prot 100.0 8.4E-40 2.9E-44 339.9 15.7 260 330-604 19-323 (336)
143 4eut_A Serine/threonine-protei 100.0 2.1E-39 7.2E-44 344.9 19.0 266 330-600 15-310 (396)
144 3f66_A Hepatocyte growth facto 100.0 2.6E-39 8.8E-44 330.4 18.8 248 330-601 31-293 (298)
145 2vd5_A DMPK protein; serine/th 100.0 7.2E-40 2.4E-44 348.8 14.7 241 330-592 67-327 (412)
146 3p1a_A MYT1 kinase, membrane-a 100.0 3.7E-39 1.3E-43 331.6 19.5 236 329-592 62-304 (311)
147 3ttj_A Mitogen-activated prote 100.0 3.3E-39 1.1E-43 349.8 20.1 252 330-592 68-355 (464)
148 1b6c_B TGF-B superfamily recep 100.0 1.9E-39 6.4E-44 338.0 17.5 255 329-601 47-338 (342)
149 3kk8_A Calcium/calmodulin depe 100.0 5.2E-39 1.8E-43 325.7 20.1 241 330-592 12-261 (284)
150 3dls_A PAS domain-containing s 100.0 1.3E-39 4.6E-44 338.4 15.9 233 329-593 29-275 (335)
151 3bhy_A Death-associated protei 100.0 3.2E-39 1.1E-43 327.0 18.3 251 329-601 10-276 (283)
152 1wak_A Serine/threonine-protei 100.0 2.1E-39 7.1E-44 344.7 17.6 257 329-592 42-391 (397)
153 1cm8_A Phosphorylated MAP kina 100.0 2.1E-39 7.1E-44 341.2 17.2 257 330-598 31-315 (367)
154 3hko_A Calcium/calmodulin-depe 100.0 1.7E-39 5.9E-44 338.8 16.4 254 329-599 31-339 (345)
155 3f3z_A Calcium/calmodulin-depe 100.0 6.6E-39 2.3E-43 323.8 20.1 241 329-592 14-261 (277)
156 3cok_A Serine/threonine-protei 100.0 1.3E-39 4.3E-44 329.2 14.8 238 330-592 17-262 (278)
157 2a2a_A Death-associated protei 100.0 5.7E-39 1.9E-43 331.7 19.9 242 329-592 17-272 (321)
158 3is5_A Calcium-dependent prote 100.0 2.1E-39 7.2E-44 329.1 16.4 244 329-592 27-278 (285)
159 3dbq_A Dual specificity protei 100.0 2.3E-39 7.8E-44 337.9 16.8 239 330-593 15-274 (343)
160 2acx_A G protein-coupled recep 100.0 4.3E-39 1.5E-43 353.6 19.6 242 330-592 190-444 (576)
161 2ac3_A MAP kinase-interacting 100.0 8.5E-39 2.9E-43 329.4 20.5 248 330-592 19-295 (316)
162 1z57_A Dual specificity protei 100.0 3.7E-39 1.3E-43 334.8 17.9 256 330-592 20-328 (339)
163 2wqm_A Serine/threonine-protei 100.0 3.8E-39 1.3E-43 331.2 17.7 256 329-602 37-300 (310)
164 2h34_A Serine/threonine-protei 100.0 6.8E-39 2.3E-43 329.3 19.3 252 330-604 40-301 (309)
165 2a19_B Interferon-induced, dou 100.0 5E-39 1.7E-43 325.6 17.9 245 329-604 16-279 (284)
166 2zmd_A Dual specificity protei 100.0 7E-39 2.4E-43 339.9 19.7 238 330-592 62-320 (390)
167 2buj_A Serine/threonine-protei 100.0 5.8E-39 2E-43 330.8 18.5 250 330-600 35-307 (317)
168 2yfx_A Tyrosine-protein kinase 100.0 3.3E-39 1.1E-43 334.4 16.6 251 330-600 36-305 (327)
169 3mi9_A Cell division protein k 100.0 5.6E-39 1.9E-43 336.0 18.5 255 330-592 23-311 (351)
170 3eqc_A Dual specificity mitoge 100.0 4E-39 1.4E-43 338.3 17.2 254 330-592 39-324 (360)
171 2qr7_A Ribosomal protein S6 ki 100.0 3.1E-39 1.1E-43 336.4 16.1 242 329-592 27-277 (342)
172 2xir_A Vascular endothelial gr 100.0 2.7E-39 9.1E-44 332.9 15.4 253 329-600 32-311 (316)
173 2rku_A Serine/threonine-protei 100.0 1E-38 3.5E-43 325.4 19.5 238 330-593 21-266 (294)
174 3a7i_A MST3 kinase, serine/thr 100.0 5.9E-39 2E-43 328.6 17.8 238 330-593 28-271 (303)
175 2owb_A Serine/threonine-protei 100.0 8E-39 2.7E-43 332.7 19.0 237 330-592 47-291 (335)
176 3mtl_A Cell division protein k 100.0 1.9E-39 6.6E-44 335.7 14.1 260 330-600 8-291 (324)
177 3i6u_A CDS1, serine/threonine- 100.0 1.6E-38 5.4E-43 340.5 21.7 242 329-592 140-399 (419)
178 3gbz_A Kinase, CMGC CDK; ssgci 100.0 2.7E-39 9.4E-44 335.3 14.9 252 330-592 40-318 (329)
179 2yex_A Serine/threonine-protei 100.0 1.7E-38 5.8E-43 320.4 20.2 241 329-592 12-261 (276)
180 2w5a_A Serine/threonine-protei 100.0 1.6E-39 5.5E-44 328.6 12.7 249 330-596 12-271 (279)
181 2y4i_B KSR2, HKSR2, kinase sup 100.0 1.8E-39 6.3E-44 334.7 13.1 258 330-613 39-316 (319)
182 2vgo_A Serine/threonine-protei 100.0 8.9E-39 3.1E-43 324.1 17.7 242 330-597 20-269 (284)
183 2w1i_A JAK2; chromosomal rearr 100.0 4.8E-39 1.6E-43 333.0 16.0 254 329-599 46-322 (326)
184 1u46_A ACK-1, activated CDC42 100.0 2.3E-39 7.9E-44 329.3 13.3 250 330-603 24-288 (291)
185 1vzo_A Ribosomal protein S6 ki 100.0 6.1E-39 2.1E-43 336.2 16.8 244 329-594 59-323 (355)
186 4aaa_A Cyclin-dependent kinase 100.0 1.8E-38 6.1E-43 329.4 19.9 255 330-592 31-306 (331)
187 1q8y_A SR protein kinase; tran 100.0 1.2E-38 4.3E-43 335.9 18.8 256 330-592 25-333 (373)
188 1t4h_A Serine/threonine-protei 100.0 2E-38 7E-43 322.5 19.7 241 330-592 32-282 (290)
189 3q60_A ROP5B; pseudokinase, tr 100.0 9.7E-40 3.3E-44 344.5 10.2 245 330-592 68-352 (371)
190 3lm5_A Serine/threonine-protei 100.0 1.5E-38 5E-43 329.5 18.7 243 330-592 35-287 (327)
191 3c4z_A Rhodopsin kinase; Ser/T 100.0 1.4E-38 4.9E-43 348.6 19.7 239 330-587 191-438 (543)
192 2fst_X Mitogen-activated prote 100.0 4.8E-39 1.6E-43 338.3 15.3 250 330-592 35-311 (367)
193 2jam_A Calcium/calmodulin-depe 100.0 2.2E-38 7.5E-43 324.6 19.8 242 329-592 14-261 (304)
194 3com_A Serine/threonine-protei 100.0 2E-38 6.8E-43 326.3 19.3 241 329-592 34-278 (314)
195 2h6d_A 5'-AMP-activated protei 100.0 2E-38 6.9E-43 319.9 19.0 237 330-592 17-261 (276)
196 3pfq_A PKC-B, PKC-beta, protei 100.0 1.3E-38 4.4E-43 360.0 19.3 238 329-592 346-597 (674)
197 1ua2_A CAK, cell division prot 100.0 9.6E-39 3.3E-43 333.6 16.4 254 329-593 15-292 (346)
198 2clq_A Mitogen-activated prote 100.0 1.4E-38 5E-43 324.1 17.3 243 330-592 28-278 (295)
199 2vx3_A Dual specificity tyrosi 100.0 1.8E-38 6.1E-43 336.1 18.3 195 330-529 60-263 (382)
200 3mwu_A Calmodulin-domain prote 100.0 2.2E-38 7.6E-43 346.2 19.6 246 329-597 27-283 (486)
201 2y7j_A Phosphorylase B kinase 100.0 3.2E-38 1.1E-42 332.0 19.7 241 330-592 100-359 (365)
202 2xrw_A Mitogen-activated prote 100.0 3.9E-38 1.3E-42 332.1 20.5 252 330-592 31-318 (371)
203 3rp9_A Mitogen-activated prote 100.0 2E-38 6.9E-43 344.0 18.8 181 330-519 59-279 (458)
204 3ll6_A Cyclin G-associated kin 100.0 4.2E-39 1.4E-43 334.3 12.8 248 330-601 34-310 (337)
205 3nsz_A CK II alpha, casein kin 100.0 4.9E-38 1.7E-42 325.8 20.6 248 330-592 42-319 (330)
206 3rgf_A Cyclin-dependent kinase 100.0 1.6E-38 5.3E-43 339.3 17.3 259 329-592 26-333 (405)
207 3coi_A Mitogen-activated prote 100.0 2.2E-38 7.5E-43 331.8 18.1 252 330-592 30-305 (353)
208 3lij_A Calcium/calmodulin depe 100.0 3.7E-38 1.3E-42 345.1 20.7 241 329-592 42-291 (494)
209 3q5i_A Protein kinase; CDPK, m 100.0 3.2E-38 1.1E-42 346.4 20.1 246 330-598 42-309 (504)
210 3nyv_A Calmodulin-domain prote 100.0 1.6E-38 5.4E-43 347.3 17.3 247 329-598 31-289 (484)
211 4exu_A Mitogen-activated prote 100.0 2.1E-38 7.3E-43 334.2 17.6 252 330-592 48-323 (371)
212 2j7t_A Serine/threonine-protei 100.0 1.8E-38 6E-43 324.7 16.5 241 330-592 25-275 (302)
213 2eu9_A Dual specificity protei 100.0 1.7E-38 5.9E-43 332.1 16.7 256 330-592 25-333 (355)
214 2ycf_A Serine/threonine-protei 100.0 6.5E-38 2.2E-42 323.9 20.7 242 329-592 15-274 (322)
215 2r3i_A Cell division protein k 100.0 3.1E-38 1.1E-42 322.5 18.1 254 330-592 9-283 (299)
216 2vwi_A Serine/threonine-protei 100.0 8.8E-39 3E-43 326.9 13.4 249 330-592 21-287 (303)
217 1x8b_A WEE1HU, WEE1-like prote 100.0 4.9E-38 1.7E-42 318.6 18.5 239 329-592 16-279 (289)
218 2x7f_A TRAF2 and NCK-interacti 100.0 2.5E-38 8.7E-43 327.3 16.3 241 330-592 30-286 (326)
219 2pml_X PFPK7, Ser/Thr protein 100.0 3.4E-38 1.2E-42 329.4 17.4 251 330-592 37-322 (348)
220 3qyz_A Mitogen-activated prote 100.0 3.4E-38 1.2E-42 331.8 17.4 253 330-592 33-313 (364)
221 3an0_A Dual specificity mitoge 100.0 2.9E-38 9.8E-43 329.1 16.4 243 330-592 57-310 (340)
222 2j0j_A Focal adhesion kinase 1 100.0 2.4E-38 8.2E-43 356.6 16.8 245 329-598 395-650 (656)
223 3pg1_A Mitogen-activated prote 100.0 5.3E-38 1.8E-42 330.0 18.1 252 330-592 28-316 (362)
224 3fme_A Dual specificity mitoge 100.0 3.3E-38 1.1E-42 320.6 15.2 243 330-592 13-266 (290)
225 3eb0_A Putative uncharacterize 100.0 6.3E-38 2.1E-42 332.1 17.9 252 330-592 13-321 (383)
226 2wtk_C Serine/threonine-protei 100.0 1.6E-37 5.5E-42 318.1 20.3 239 330-593 11-264 (305)
227 4e7w_A Glycogen synthase kinas 100.0 7.7E-38 2.6E-42 332.5 18.5 259 330-599 46-330 (394)
228 3e3p_A Protein kinase, putativ 100.0 7.1E-38 2.4E-42 328.6 17.4 265 330-599 29-323 (360)
229 1phk_A Phosphorylase kinase; g 100.0 6.5E-38 2.2E-42 319.9 16.6 241 330-592 23-283 (298)
230 1j1b_A Glycogen synthase kinas 100.0 7.6E-38 2.6E-42 335.3 17.9 260 330-599 60-345 (420)
231 3n9x_A Phosphotransferase; mal 100.0 6.5E-38 2.2E-42 337.2 17.3 186 330-524 32-252 (432)
232 1blx_A Cyclin-dependent kinase 100.0 1.3E-37 4.3E-42 322.0 18.0 253 330-592 17-296 (326)
233 2rio_A Serine/threonine-protei 100.0 1.5E-37 5.2E-42 334.4 17.4 244 330-592 21-295 (434)
234 1zy4_A Serine/threonine-protei 100.0 2.3E-37 7.8E-42 316.1 17.8 240 330-592 12-283 (303)
235 3fhr_A MAP kinase-activated pr 100.0 1.1E-37 3.7E-42 324.2 14.9 244 330-592 35-287 (336)
236 2wei_A Calmodulin-domain prote 100.0 4.4E-37 1.5E-41 312.2 19.0 246 329-597 27-283 (287)
237 2i6l_A Mitogen-activated prote 100.0 4.8E-38 1.6E-42 323.9 11.2 250 330-592 17-305 (320)
238 3aln_A Dual specificity mitoge 100.0 1.3E-37 4.3E-42 322.4 14.3 245 330-592 28-285 (327)
239 3p23_A Serine/threonine-protei 100.0 2.8E-37 9.7E-42 331.6 17.2 238 330-592 30-283 (432)
240 2b9h_A MAP kinase FUS3, mitoge 100.0 1.8E-37 6.1E-42 324.6 15.2 250 330-592 17-305 (353)
241 3cek_A Dual specificity protei 100.0 7.2E-37 2.5E-41 314.7 18.8 239 330-593 34-293 (313)
242 3a99_A Proto-oncogene serine/t 100.0 1.7E-37 5.9E-42 320.5 12.2 231 330-592 49-293 (320)
243 2dyl_A Dual specificity mitoge 100.0 7E-37 2.4E-41 315.1 15.2 241 330-592 31-283 (318)
244 2iwi_A Serine/threonine-protei 100.0 4.9E-37 1.7E-41 315.7 13.1 232 329-592 36-283 (312)
245 3uqc_A Probable conserved tran 100.0 1.9E-36 6.4E-41 307.5 16.6 227 330-602 37-268 (286)
246 3dzo_A Rhoptry kinase domain; 100.0 5.6E-37 1.9E-41 327.8 10.7 235 330-591 84-362 (413)
247 2pzi_A Probable serine/threoni 100.0 2E-36 6.7E-41 344.0 12.6 231 330-597 86-326 (681)
248 3qa8_A MGC80376 protein; kinas 100.0 4E-36 1.4E-40 333.3 11.0 262 329-600 19-310 (676)
249 3m2w_A MAP kinase-activated pr 100.0 4.3E-35 1.5E-39 299.5 17.6 222 330-592 24-256 (299)
250 2vuw_A Serine/threonine-protei 100.0 1.3E-34 4.3E-39 301.1 12.4 236 328-591 24-329 (336)
251 4azs_A Methyltransferase WBDD; 100.0 1.8E-29 6E-34 279.4 5.6 180 332-523 242-437 (569)
252 1ogq_A PGIP-2, polygalacturona 99.9 2.6E-26 8.8E-31 235.9 12.2 193 22-216 2-208 (313)
253 3en9_A Glycoprotease, O-sialog 99.9 1.5E-26 5.2E-31 254.4 9.7 178 329-525 341-539 (540)
254 3rgz_A Protein brassinosteroid 99.9 6.4E-24 2.2E-28 244.5 10.8 181 19-202 5-218 (768)
255 4eco_A Uncharacterized protein 99.9 1.2E-23 4E-28 237.0 7.7 185 22-211 26-333 (636)
256 4ecn_A Leucine-rich repeat pro 99.9 1.2E-23 4.1E-28 242.0 7.0 193 20-218 263-586 (876)
257 1zar_A RIO2 kinase; serine kin 99.9 1.4E-22 4.8E-27 204.5 10.0 138 330-497 96-252 (282)
258 3rgz_A Protein brassinosteroid 99.8 7.9E-21 2.7E-25 218.7 10.1 162 67-229 515-751 (768)
259 4fcg_A Uncharacterized protein 99.8 4.9E-21 1.7E-25 197.7 7.3 190 21-217 22-241 (328)
260 3m19_A Variable lymphocyte rec 99.8 1.3E-19 4.4E-24 179.7 13.0 153 67-220 36-194 (251)
261 2v70_A SLIT-2, SLIT homolog 2 99.8 1.4E-19 4.9E-24 175.6 11.2 154 47-201 5-170 (220)
262 3e6j_A Variable lymphocyte rec 99.8 3.6E-19 1.2E-23 173.9 12.9 153 45-200 11-175 (229)
263 2o6s_A Variable lymphocyte rec 99.8 4.4E-19 1.5E-23 170.5 12.8 152 48-201 2-165 (208)
264 2v9t_B SLIT homolog 2 protein 99.8 1E-18 3.5E-23 169.5 11.9 149 47-197 5-165 (220)
265 1zth_A RIO1 serine protein kin 99.8 8.8E-19 3E-23 174.4 10.5 134 330-478 53-220 (258)
266 1ogq_A PGIP-2, polygalacturona 99.8 4.1E-19 1.4E-23 182.1 7.5 158 67-226 126-312 (313)
267 2xot_A Amphoterin-induced prot 99.8 7.8E-19 2.7E-23 183.8 9.1 176 45-222 10-206 (361)
268 2o6q_A Variable lymphocyte rec 99.7 1E-17 3.5E-22 167.9 14.4 173 45-218 6-194 (270)
269 2v9t_B SLIT homolog 2 protein 99.7 1.6E-17 5.6E-22 161.0 12.6 157 57-222 7-169 (220)
270 1w8a_A SLIT protein; signaling 99.7 1.8E-18 6.1E-23 164.1 5.6 127 72-202 14-144 (192)
271 2v70_A SLIT-2, SLIT homolog 2 99.7 1.5E-17 5E-22 161.4 12.1 158 56-222 6-170 (220)
272 3rfs_A Internalin B, repeat mo 99.7 5.1E-17 1.8E-21 162.9 14.0 153 66-221 63-221 (272)
273 2o6q_A Variable lymphocyte rec 99.7 2.9E-17 9.9E-22 164.6 11.6 162 51-218 3-170 (270)
274 2z66_A Variable lymphocyte rec 99.7 2.3E-17 7.8E-22 168.4 10.2 159 47-207 1-174 (306)
275 3e6j_A Variable lymphocyte rec 99.7 1E-16 3.5E-21 156.4 14.0 156 56-221 14-175 (229)
276 4fcg_A Uncharacterized protein 99.7 1.8E-17 6E-22 171.0 8.9 140 67-210 128-279 (328)
277 1ozn_A Reticulon 4 receptor; N 99.7 4.2E-17 1.5E-21 164.6 11.1 143 67-210 57-203 (285)
278 1ozn_A Reticulon 4 receptor; N 99.7 1.4E-16 4.7E-21 160.9 12.9 170 47-217 2-189 (285)
279 2z80_A TOLL-like receptor 2, v 99.7 3.6E-17 1.2E-21 170.6 8.6 163 45-211 22-201 (353)
280 2id5_A Lingo-1, leucine rich r 99.7 7.8E-17 2.7E-21 175.0 11.1 170 47-217 3-188 (477)
281 2o6r_A Variable lymphocyte rec 99.7 1.8E-16 6.1E-21 148.1 11.9 137 48-201 2-141 (177)
282 1p9a_G Platelet glycoprotein I 99.7 2.5E-16 8.4E-21 159.5 13.4 148 67-217 32-184 (290)
283 2z81_A CD282 antigen, TOLL-lik 99.7 5.5E-17 1.9E-21 179.4 8.6 156 52-210 3-174 (549)
284 1w8a_A SLIT protein; signaling 99.7 2.6E-16 8.8E-21 149.1 12.0 174 47-221 2-186 (192)
285 3zyi_A Leucine-rich repeat-con 99.7 2E-16 7E-21 170.6 12.7 124 47-171 46-180 (452)
286 4g8a_A TOLL-like receptor 4; l 99.7 7.9E-17 2.7E-21 180.9 9.2 153 57-210 34-199 (635)
287 3t6q_A CD180 antigen; protein- 99.7 2.3E-16 7.8E-21 176.7 11.7 165 46-211 3-180 (606)
288 2z66_A Variable lymphocyte rec 99.6 1.7E-16 5.8E-21 161.9 9.1 141 67-209 79-224 (306)
289 3oja_B Anopheles plasmodium-re 99.6 2.4E-16 8E-21 176.2 10.9 149 68-217 53-204 (597)
290 3m19_A Variable lymphocyte rec 99.6 5.7E-16 1.9E-20 153.3 12.3 133 66-199 59-194 (251)
291 2xwt_C Thyrotropin receptor; s 99.6 1.5E-16 5.2E-21 156.2 7.8 167 45-215 2-189 (239)
292 3j0a_A TOLL-like receptor 5; m 99.6 3.3E-16 1.1E-20 182.1 11.8 137 87-223 422-565 (844)
293 2o6s_A Variable lymphocyte rec 99.6 2.1E-15 7.1E-20 144.7 15.0 156 57-221 3-164 (208)
294 4b8c_D Glucose-repressible alc 99.6 1.9E-16 6.5E-21 180.3 8.6 179 23-207 129-339 (727)
295 3o6n_A APL1; leucine-rich repe 99.6 3E-16 1E-20 165.9 9.5 150 67-217 46-198 (390)
296 3zyj_A Leucine-rich repeat-con 99.6 6.1E-16 2.1E-20 166.2 12.0 155 66-222 112-296 (440)
297 2z62_A TOLL-like receptor 4, v 99.6 5.1E-16 1.7E-20 155.9 10.5 150 58-208 11-173 (276)
298 3rfs_A Internalin B, repeat mo 99.6 9.6E-16 3.3E-20 153.6 12.4 135 66-201 85-222 (272)
299 3vq2_A TLR4, TOLL-like recepto 99.6 5.3E-16 1.8E-20 173.7 10.7 151 57-208 14-177 (606)
300 1p9a_G Platelet glycoprotein I 99.6 1.8E-15 6E-20 153.2 13.5 151 66-221 55-211 (290)
301 3vq2_A TLR4, TOLL-like recepto 99.6 3.6E-16 1.2E-20 175.1 9.0 154 68-222 401-562 (606)
302 3zyi_A Leucine-rich repeat-con 99.6 7.8E-16 2.7E-20 166.0 11.2 156 66-223 123-308 (452)
303 3v47_A TOLL-like receptor 5B a 99.6 3.9E-16 1.3E-20 168.4 8.6 152 56-208 12-178 (455)
304 2wfh_A SLIT homolog 2 protein 99.6 1.6E-15 5.5E-20 143.7 11.4 124 71-199 15-141 (193)
305 2z62_A TOLL-like receptor 4, v 99.6 9.4E-16 3.2E-20 154.0 10.1 112 67-179 53-166 (276)
306 4gyi_A RIO2 kinase; protein ki 99.6 3.5E-16 1.2E-20 162.0 7.0 134 329-478 100-266 (397)
307 3v47_A TOLL-like receptor 5B a 99.6 5.6E-16 1.9E-20 167.1 8.9 132 91-222 275-412 (455)
308 3zyj_A Leucine-rich repeat-con 99.6 1.7E-15 5.8E-20 162.8 12.5 150 47-197 35-198 (440)
309 2ft3_A Biglycan; proteoglycan, 99.6 3.5E-15 1.2E-19 154.0 12.5 167 46-218 26-206 (332)
310 1ziw_A TOLL-like receptor 3; i 99.6 2.3E-15 8E-20 170.8 11.5 165 51-217 2-183 (680)
311 4glp_A Monocyte differentiatio 99.6 1.5E-15 5E-20 155.3 8.5 134 67-202 118-268 (310)
312 2ell_A Acidic leucine-rich nuc 99.6 1.1E-15 3.7E-20 141.4 6.3 133 66-202 24-164 (168)
313 3t6q_A CD180 antigen; protein- 99.6 1.2E-15 4.2E-20 170.7 7.9 143 67-210 377-526 (606)
314 3oja_A Leucine-rich immune mol 99.6 1.3E-15 4.3E-20 165.8 7.3 146 68-220 101-252 (487)
315 1xku_A Decorin; proteoglycan, 99.6 4.6E-15 1.6E-19 152.9 10.8 147 47-197 25-184 (330)
316 3a79_B TLR6, VLRB.59, TOLL-lik 99.6 4.8E-15 1.6E-19 164.4 10.9 153 66-222 353-514 (562)
317 4g8a_A TOLL-like receptor 4; l 99.6 3.6E-15 1.2E-19 167.4 9.5 156 67-222 421-584 (635)
318 1ziw_A TOLL-like receptor 3; i 99.6 9.4E-15 3.2E-19 165.8 12.2 152 70-222 458-626 (680)
319 4eco_A Uncharacterized protein 99.5 9.1E-16 3.1E-20 172.6 3.0 150 66-218 206-390 (636)
320 4ezg_A Putative uncharacterize 99.5 3.4E-15 1.2E-19 142.0 6.4 142 67-216 45-192 (197)
321 1wwl_A Monocyte differentiatio 99.5 1.2E-15 4.1E-20 156.1 3.5 87 89-175 93-186 (312)
322 2z7x_B TOLL-like receptor 1, v 99.5 5.8E-15 2E-19 162.0 8.9 151 66-221 324-484 (520)
323 3j0a_A TOLL-like receptor 5; m 99.5 1.4E-14 4.8E-19 168.4 12.6 161 55-218 15-187 (844)
324 3cvr_A Invasion plasmid antige 99.5 6.6E-15 2.3E-19 161.9 9.1 153 45-218 35-193 (571)
325 2je0_A Acidic leucine-rich nuc 99.5 2.2E-15 7.5E-20 136.4 4.1 123 67-192 18-148 (149)
326 2z63_A TOLL-like receptor 4, v 99.5 7.9E-15 2.7E-19 162.7 9.1 141 67-208 348-494 (570)
327 2je0_A Acidic leucine-rich nuc 99.5 3E-15 1E-19 135.4 4.6 124 89-213 15-145 (149)
328 3oja_B Anopheles plasmodium-re 99.5 2.1E-14 7.2E-19 160.4 12.3 110 67-177 76-186 (597)
329 2z63_A TOLL-like receptor 4, v 99.5 1.4E-14 4.8E-19 160.7 10.8 144 66-210 28-175 (570)
330 2xot_A Amphoterin-induced prot 99.5 4.2E-14 1.4E-18 147.8 13.3 157 50-217 9-175 (361)
331 4ecn_A Leucine-rich repeat pro 99.5 3.2E-15 1.1E-19 172.0 5.1 149 66-218 448-632 (876)
332 2ell_A Acidic leucine-rich nuc 99.5 9.1E-15 3.1E-19 135.1 7.1 124 89-213 22-152 (168)
333 2xwt_C Thyrotropin receptor; s 99.5 9.5E-15 3.3E-19 143.3 7.5 151 66-218 55-218 (239)
334 1wwl_A Monocyte differentiatio 99.5 1.8E-15 6.3E-20 154.7 2.4 134 67-201 96-245 (312)
335 2wfh_A SLIT homolog 2 protein 99.5 2.7E-14 9.2E-19 135.3 10.3 126 94-222 13-143 (193)
336 3oja_A Leucine-rich immune mol 99.5 8.3E-15 2.9E-19 159.3 7.5 148 67-218 59-227 (487)
337 2z81_A CD282 antigen, TOLL-lik 99.5 1.1E-14 3.7E-19 161.0 7.9 152 67-220 335-512 (549)
338 2id5_A Lingo-1, leucine rich r 99.5 1.7E-14 5.8E-19 156.6 8.9 145 66-211 56-203 (477)
339 2ft3_A Biglycan; proteoglycan, 99.5 1.3E-13 4.3E-18 142.3 13.2 146 68-218 125-277 (332)
340 4ezg_A Putative uncharacterize 99.5 2E-14 7E-19 136.6 6.6 127 67-198 67-195 (197)
341 4glp_A Monocyte differentiatio 99.5 1.1E-14 3.8E-19 148.7 4.8 140 68-207 93-247 (310)
342 1h6t_A Internalin B; cell adhe 99.5 6.1E-14 2.1E-18 141.9 10.2 143 66-218 68-213 (291)
343 3a79_B TLR6, VLRB.59, TOLL-lik 99.5 4.5E-14 1.6E-18 156.5 9.9 139 66-208 52-195 (562)
344 1h6u_A Internalin H; cell adhe 99.5 1E-13 3.6E-18 141.4 11.4 143 66-218 63-208 (308)
345 3o6n_A APL1; leucine-rich repe 99.5 1.2E-13 4.2E-18 145.7 12.1 110 67-177 70-180 (390)
346 3o53_A Protein LRIM1, AGAP0063 99.5 1.8E-14 6.1E-19 147.7 5.1 146 68-220 101-252 (317)
347 1xeu_A Internalin C; cellular 99.5 7.6E-14 2.6E-18 139.0 9.5 142 67-219 42-186 (263)
348 1dce_A Protein (RAB geranylger 99.5 5.3E-14 1.8E-18 155.3 9.1 118 68-190 443-566 (567)
349 1xku_A Decorin; proteoglycan, 99.5 1.4E-13 4.8E-18 141.8 11.4 147 68-218 123-276 (330)
350 3g39_A Variable lymphocyte rec 99.5 1.1E-13 3.8E-18 128.1 9.3 103 71-177 14-117 (170)
351 4b8c_D Glucose-repressible alc 99.5 6.6E-15 2.3E-19 167.5 0.7 138 66-208 224-365 (727)
352 1h6u_A Internalin H; cell adhe 99.5 1.3E-13 4.3E-18 140.8 10.0 144 66-219 85-231 (308)
353 1h6t_A Internalin B; cell adhe 99.5 1.2E-13 4.1E-18 139.7 9.8 141 67-218 47-191 (291)
354 3o53_A Protein LRIM1, AGAP0063 99.5 2.8E-14 9.7E-19 146.2 5.2 143 66-218 80-227 (317)
355 2z80_A TOLL-like receptor 2, v 99.5 3.4E-14 1.2E-18 147.9 5.8 151 66-218 76-235 (353)
356 1m9s_A Internalin B; cell inva 99.4 1.3E-13 4.5E-18 153.1 10.2 143 66-218 65-210 (605)
357 2z7x_B TOLL-like receptor 1, v 99.4 4.1E-14 1.4E-18 155.3 6.0 139 66-208 21-164 (520)
358 3g39_A Variable lymphocyte rec 99.4 2.8E-13 9.7E-18 125.4 10.4 106 93-201 11-119 (170)
359 1ds9_A Outer arm dynein; leuci 99.4 5.8E-16 2E-20 147.4 -8.3 142 67-213 19-179 (198)
360 4ay9_X Follicle-stimulating ho 99.4 2E-13 6.7E-18 142.0 10.0 99 51-151 7-117 (350)
361 2o6r_A Variable lymphocyte rec 99.4 1.9E-13 6.6E-18 127.3 8.4 113 66-179 28-141 (177)
362 2r9u_A Variable lymphocyte rec 99.4 4.9E-13 1.7E-17 124.2 11.0 104 70-177 16-120 (174)
363 1a9n_A U2A', U2A'; complex (nu 99.4 8.7E-14 3E-18 129.6 5.0 125 67-197 20-153 (176)
364 2r9u_A Variable lymphocyte rec 99.4 8.3E-13 2.9E-17 122.7 10.6 103 94-199 15-120 (174)
365 4fmz_A Internalin; leucine ric 99.4 3.4E-13 1.2E-17 139.8 8.5 145 66-219 177-325 (347)
366 3cvr_A Invasion plasmid antige 99.4 8.1E-13 2.8E-17 145.3 11.8 117 67-202 81-197 (571)
367 1a9n_A U2A', U2A'; complex (nu 99.4 1.9E-13 6.6E-18 127.3 5.7 124 86-213 14-145 (176)
368 2ifg_A High affinity nerve gro 99.4 5.1E-13 1.7E-17 138.6 9.4 113 48-176 2-117 (347)
369 1m9s_A Internalin B; cell inva 99.4 4.7E-13 1.6E-17 148.7 9.5 141 67-218 44-188 (605)
370 3bz5_A Internalin-J, INLJ; leu 99.4 8.3E-13 2.8E-17 142.2 11.1 138 67-216 149-297 (457)
371 1o6v_A Internalin A; bacterial 99.4 6.3E-13 2.2E-17 143.8 10.1 124 67-198 222-345 (466)
372 1o6v_A Internalin A; bacterial 99.4 5.2E-13 1.8E-17 144.4 9.3 144 66-219 243-389 (466)
373 1xeu_A Internalin C; cellular 99.4 6.7E-13 2.3E-17 132.1 8.9 124 66-199 63-187 (263)
374 1jl5_A Outer protein YOPM; leu 99.4 2.6E-12 8.9E-17 138.2 12.6 127 67-209 112-238 (454)
375 4fmz_A Internalin; leucine ric 99.3 5.3E-13 1.8E-17 138.3 5.9 144 66-217 199-345 (347)
376 3bz5_A Internalin-J, INLJ; leu 99.3 3.5E-12 1.2E-16 137.3 12.4 137 66-217 106-245 (457)
377 1dce_A Protein (RAB geranylger 99.3 1.1E-12 3.8E-17 144.7 8.5 105 92-201 442-550 (567)
378 1jl5_A Outer protein YOPM; leu 99.3 4.5E-13 1.5E-17 144.2 4.7 143 66-216 11-184 (454)
379 3g06_A SSPH2 (leucine-rich rep 99.3 6.3E-13 2.2E-17 147.9 5.6 150 45-215 14-171 (622)
380 2ifg_A High affinity nerve gro 99.2 1E-11 3.4E-16 128.8 7.8 104 94-199 11-118 (347)
381 3g06_A SSPH2 (leucine-rich rep 99.2 4.3E-11 1.5E-15 133.1 12.4 52 162-216 221-272 (622)
382 2ast_B S-phase kinase-associat 99.2 3.1E-13 1E-17 139.4 -4.8 126 67-194 71-205 (336)
383 2ca6_A RAN GTPase-activating p 99.2 5.6E-13 1.9E-17 140.5 -3.6 133 66-199 94-259 (386)
384 2ast_B S-phase kinase-associat 99.2 4.6E-13 1.6E-17 138.1 -4.4 140 52-198 35-183 (336)
385 2ca6_A RAN GTPase-activating p 99.2 6E-13 2E-17 140.2 -4.2 152 66-217 60-256 (386)
386 3tm0_A Aminoglycoside 3'-phosp 99.2 8.1E-11 2.8E-15 116.8 11.2 135 331-476 21-213 (263)
387 3goz_A Leucine-rich repeat-con 99.2 2.7E-12 9.2E-17 134.0 -0.2 136 67-202 23-185 (362)
388 3goz_A Leucine-rich repeat-con 99.1 5E-12 1.7E-16 132.0 -0.5 146 71-217 3-179 (362)
389 4ay9_X Follicle-stimulating ho 99.1 1.4E-10 4.6E-15 120.5 10.0 140 59-207 7-152 (350)
390 1nd4_A Aminoglycoside 3'-phosp 99.1 1.7E-10 5.9E-15 114.0 10.2 129 333-476 29-214 (264)
391 1ds9_A Outer arm dynein; leuci 99.1 4.1E-13 1.4E-17 127.6 -8.6 128 87-217 14-152 (198)
392 3rw6_A Nuclear RNA export fact 99.0 6.4E-13 2.2E-17 131.1 -10.4 160 52-214 77-257 (267)
393 3dxp_A Putative acyl-COA dehyd 99.0 1.1E-09 3.7E-14 114.0 11.6 141 330-478 44-250 (359)
394 1z7x_W Ribonuclease inhibitor; 99.0 1.1E-11 3.9E-16 133.4 -6.4 153 66-218 227-411 (461)
395 1z7x_W Ribonuclease inhibitor; 98.9 1.7E-11 6E-16 132.0 -7.1 151 67-218 200-383 (461)
396 3sg8_A APH(2'')-ID; antibiotic 98.8 2.3E-09 7.8E-14 108.8 4.8 181 331-524 27-287 (304)
397 3un9_A NLR family member X1; l 98.7 1.2E-10 4.2E-15 121.6 -7.6 107 91-197 101-224 (372)
398 3sb4_A Hypothetical leucine ri 98.6 4.1E-08 1.4E-12 100.7 8.5 139 67-209 102-298 (329)
399 3un9_A NLR family member X1; l 98.6 4.2E-10 1.4E-14 117.5 -8.0 141 66-206 101-261 (372)
400 3sb4_A Hypothetical leucine ri 98.4 1.3E-07 4.6E-12 96.8 5.7 129 81-211 83-276 (329)
401 3r70_A Aminoglycoside phosphot 98.4 4.3E-07 1.5E-11 92.7 8.9 133 330-478 43-239 (320)
402 3rw6_A Nuclear RNA export fact 98.4 1.3E-07 4.5E-12 93.1 3.1 111 78-190 128-257 (267)
403 3ogk_B Coronatine-insensitive 98.3 1.2E-08 4E-13 113.4 -6.7 113 87-199 374-503 (592)
404 3d1u_A Putative fructosamine-3 98.3 5.1E-06 1.7E-10 83.2 12.8 140 330-475 21-215 (288)
405 3tdw_A Gentamicin resistance p 98.3 3E-06 1E-10 85.7 11.2 135 331-477 26-225 (306)
406 3ogk_B Coronatine-insensitive 98.3 7.2E-08 2.5E-12 107.0 -1.6 139 67-207 139-292 (592)
407 4gkh_A Aminoglycoside 3'-phosp 98.2 4.2E-06 1.5E-10 82.8 10.5 135 332-477 32-224 (272)
408 3ats_A Putative uncharacterize 98.2 5.6E-06 1.9E-10 85.6 10.2 78 331-408 27-122 (357)
409 1io0_A Tropomodulin; LRR prote 98.1 9.3E-08 3.2E-12 89.3 -3.9 112 86-197 31-164 (185)
410 3ovc_A Hygromycin-B 4-O-kinase 98.1 1E-05 3.6E-10 83.8 10.6 143 331-478 48-245 (362)
411 2p1m_B Transport inhibitor res 98.0 1.2E-07 4.2E-12 105.2 -5.5 63 135-198 429-495 (594)
412 2q83_A YTAA protein; 2635576, 98.0 2.6E-05 8.9E-10 79.8 11.1 141 332-476 40-252 (346)
413 2p1m_B Transport inhibitor res 98.0 3E-07 1E-11 101.9 -3.8 122 88-211 102-238 (594)
414 2ra8_A Uncharacterized protein 97.9 9.2E-07 3.1E-11 91.5 -0.7 110 86-198 167-293 (362)
415 1io0_A Tropomodulin; LRR prote 97.8 9.4E-07 3.2E-11 82.4 -3.1 110 66-175 36-164 (185)
416 4fdw_A Leucine rich hypothetic 97.7 5.3E-05 1.8E-09 79.6 8.7 124 67-197 204-335 (401)
417 2olc_A MTR kinase, methylthior 97.7 8.5E-05 2.9E-09 77.9 10.2 73 330-404 36-120 (397)
418 2ra8_A Uncharacterized protein 97.7 1.2E-05 4.1E-10 83.1 2.2 138 66-205 107-273 (362)
419 4fdw_A Leucine rich hypothetic 97.7 0.00012 4E-09 76.9 9.8 64 82-147 171-235 (401)
420 3jr1_A Putative fructosamine-3 97.6 0.00027 9.2E-09 71.3 11.2 138 331-472 43-232 (312)
421 1zyl_A Hypothetical protein YI 97.3 0.0017 5.9E-08 65.7 12.7 143 332-477 34-224 (328)
422 2pyw_A Uncharacterized protein 97.3 0.0009 3.1E-08 70.6 10.8 76 445-521 231-313 (420)
423 3f7w_A Putative fructosamine-3 97.3 0.0015 5E-08 65.0 11.6 73 330-406 21-97 (288)
424 3dxq_A Choline/ethanolamine ki 97.2 0.0012 4.1E-08 66.2 9.5 70 330-406 24-95 (301)
425 3feg_A Choline/ethanolamine ki 97.0 0.0016 5.6E-08 67.4 9.5 143 331-477 57-255 (379)
426 2ppq_A HSK, HK, homoserine kin 96.9 0.0041 1.4E-07 62.7 11.1 144 331-476 29-217 (322)
427 1nw1_A Choline kinase (49.2 KD 96.9 0.0021 7.2E-08 67.9 9.1 71 331-406 80-159 (429)
428 3e4g_A ATP synthase subunit S, 96.9 9.2E-05 3.1E-09 67.6 -1.7 34 92-125 62-95 (176)
429 2qg7_A Ethanolamine kinase PV0 96.8 0.0056 1.9E-07 65.0 11.8 72 331-406 115-188 (458)
430 3c5i_A Choline kinase; choline 96.8 0.0024 8.2E-08 66.0 8.4 72 331-406 40-121 (369)
431 3csv_A Aminoglycoside phosphot 96.8 0.0063 2.1E-07 61.8 11.2 143 332-478 26-219 (333)
432 3e4g_A ATP synthase subunit S, 96.4 0.00036 1.2E-08 63.6 -1.2 84 114-197 60-153 (176)
433 3rfe_A Platelet glycoprotein I 96.2 0.0052 1.8E-07 53.1 5.5 34 163-196 32-67 (130)
434 3i1a_A Spectinomycin phosphotr 96.2 0.03 1E-06 56.9 12.1 33 446-478 206-238 (339)
435 3rfe_A Platelet glycoprotein I 96.2 0.005 1.7E-07 53.2 4.9 54 95-150 12-67 (130)
436 4h09_A Hypothetical leucine ri 95.9 0.014 4.7E-07 60.3 8.0 102 87-191 213-317 (379)
437 4gt6_A Cell surface protein; l 95.7 0.0098 3.4E-07 61.9 5.9 109 82-196 256-369 (394)
438 1pgv_A TMD-1, tropomodulin TMD 95.5 0.00068 2.3E-08 63.0 -3.5 86 87-172 37-136 (197)
439 2yle_A Protein spire homolog 1 95.4 0.095 3.2E-06 49.0 10.3 99 404-519 33-131 (229)
440 4fs7_A Uncharacterized protein 95.0 0.048 1.6E-06 56.6 8.2 107 82-192 244-374 (394)
441 4gt6_A Cell surface protein; l 94.8 0.047 1.6E-06 56.6 7.6 103 103-209 253-358 (394)
442 4fs7_A Uncharacterized protein 94.7 0.037 1.3E-06 57.5 6.3 87 82-172 288-376 (394)
443 4h09_A Hypothetical leucine ri 94.6 0.042 1.4E-06 56.6 6.4 133 68-216 219-356 (379)
444 3f2s_A CK, chetk-alpha, cholin 94.5 0.13 4.6E-06 53.2 10.1 30 447-476 245-280 (401)
445 3mes_A Choline kinase; malaria 94.4 0.17 5.8E-06 52.9 10.5 142 331-477 77-292 (424)
446 1pgv_A TMD-1, tropomodulin TMD 94.0 0.0041 1.4E-07 57.7 -2.5 84 66-149 41-137 (197)
447 2ks1_B Epidermal growth factor 91.0 0.17 5.9E-06 33.9 3.0 9 271-279 31-39 (44)
448 2k1k_A Ephrin type-A receptor 91.0 0.13 4.6E-06 33.4 2.4 31 246-277 7-37 (38)
449 2l2t_A Receptor tyrosine-prote 90.5 0.17 5.9E-06 33.8 2.7 10 271-280 30-39 (44)
450 3g15_A CK, chetk-alpha, cholin 88.9 0.99 3.4E-05 46.7 8.5 30 448-477 246-281 (401)
451 2jwa_A Receptor tyrosine-prote 85.1 0.49 1.7E-05 31.6 2.2 7 252-258 14-20 (44)
452 4ann_A ESSB; membrane protein, 76.3 4.8 0.00016 37.4 6.5 117 376-525 42-158 (215)
453 3cxl_A N-chimerin; SH2, RHO-GA 75.2 0.36 1.2E-05 51.2 -1.7 58 330-390 148-215 (463)
454 4ano_A ESSB; membrane protein, 74.8 6.2 0.00021 36.8 6.9 114 377-525 48-163 (219)
455 2jwa_A Receptor tyrosine-prote 73.2 2 6.9E-05 28.7 2.2 29 253-281 12-40 (44)
456 2klu_A T-cell surface glycopro 66.3 4.9 0.00017 29.0 3.1 18 255-272 12-29 (70)
457 2l2t_A Receptor tyrosine-prote 65.0 4.8 0.00016 26.9 2.7 16 267-282 23-38 (44)
458 2ks1_B Epidermal growth factor 63.9 4.8 0.00016 26.9 2.5 12 271-282 28-39 (44)
459 1cja_A Protein (actin-fragmin 24.7 4.7E+02 0.016 25.8 10.6 78 393-477 156-238 (342)
No 1
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=1.3e-54 Score=443.09 Aligned_cols=249 Identities=23% Similarity=0.354 Sum_probs=206.0
Q ss_pred hHcccCCceeEEEEEEc------CCcEEEEEEeccccC--ChHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEec
Q 006922 330 EVLGKGTFGMAYKAILE------DGTTVVVKRLKDVNV--GKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYY 401 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 401 (625)
+.||+|+||+||+|.+. +++.||||+++.... ..++|.+|+.++++++|||||+++|+|.+.+..++|||||
T Consensus 32 ~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~Ey~ 111 (308)
T 4gt4_A 32 EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYC 111 (308)
T ss_dssp EEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred eEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEEEEEcC
Confidence 56999999999999862 468899999976432 3478999999999999999999999999999999999999
Q ss_pred cCCChhhhhccccCC-----------CCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEec
Q 006922 402 SLGSVSAMLHSERGE-----------GRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSD 470 (625)
Q Consensus 402 ~~g~L~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~D 470 (625)
++|+|.++|+..... ....++|.++.+|+.|||+||+|||+++ ||||||||+||||++++.+||+|
T Consensus 112 ~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDLK~~NILl~~~~~~Ki~D 188 (308)
T 4gt4_A 112 SHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH---VVHKDLATRNVLVYDKLNVKISD 188 (308)
T ss_dssp SSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECC
T ss_pred CCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC---CCCCCccccceEECCCCCEEECC
Confidence 999999999754321 1235899999999999999999999998 99999999999999999999999
Q ss_pred cccccccccc-----ccccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHh-CCCCCCCCCCcchhhHHHHHHHHhh
Q 006922 471 LGLTTITSAL-----APVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVR 544 (625)
Q Consensus 471 fGla~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~ 544 (625)
||+|+..... .....||+.|||||++.+..|+.++|||||||++|||+| |+.||.+....+.... +.
T Consensus 189 FGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~~~---i~---- 261 (308)
T 4gt4_A 189 LGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEM---IR---- 261 (308)
T ss_dssp SCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHH---HH----
T ss_pred cccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHHHHHH---HH----
Confidence 9999876432 223467888999999999999999999999999999999 8999987654333222 21
Q ss_pred cccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhC
Q 006922 545 EEWTAEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVR 598 (625)
Q Consensus 545 ~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~ 598 (625)
.+. ..+.+.++..++.+++.+||+.||++||||.||++.|+...
T Consensus 262 ~~~----------~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~~ 305 (308)
T 4gt4_A 262 NRQ----------VLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAWG 305 (308)
T ss_dssp TTC----------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred cCC----------CCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhcc
Confidence 111 11222334457888999999999999999999999998753
No 2
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=3.1e-54 Score=444.48 Aligned_cols=251 Identities=25% Similarity=0.381 Sum_probs=202.5
Q ss_pred hHcccCCceeEEEEEEc------CCcEEEEEEeccccC-ChHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEecc
Q 006922 330 EVLGKGTFGMAYKAILE------DGTTVVVKRLKDVNV-GKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYS 402 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 402 (625)
+.||+|+||+||+|++. +++.||||+++.... ..++|.+|+++|++++|||||+++|+|.+.+..++|||||+
T Consensus 47 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey~~ 126 (329)
T 4aoj_A 47 WELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMR 126 (329)
T ss_dssp EEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred EEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCC
Confidence 56999999999999864 478999999986532 24679999999999999999999999999999999999999
Q ss_pred CCChhhhhccccCC----------CCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEeccc
Q 006922 403 LGSVSAMLHSERGE----------GRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLG 472 (625)
Q Consensus 403 ~g~L~~~l~~~~~~----------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfG 472 (625)
+|+|.++++..... ...+++|.++.+|+.|+|+||+|||+.+ ||||||||+||||++++.+||+|||
T Consensus 127 ~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDLKp~NILl~~~~~~Ki~DFG 203 (329)
T 4aoj_A 127 HGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH---FVHRDLATRNCLVGQGLVVKIGDFG 203 (329)
T ss_dssp TCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEETTTEEEECCCC
T ss_pred CCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCC---eecccccHhhEEECCCCcEEEcccc
Confidence 99999999865421 1246999999999999999999999987 9999999999999999999999999
Q ss_pred cccccccc-----ccccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHh-CCCCCCCCCCcchhhHHHHHHHHhhcc
Q 006922 473 LTTITSAL-----APVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREE 546 (625)
Q Consensus 473 la~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~ 546 (625)
+|+..... .....||+.|||||++.+..|+.++|||||||++|||+| |+.||......+.... +. .+.
T Consensus 204 la~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~---i~---~g~ 277 (329)
T 4aoj_A 204 MSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDC---IT---QGR 277 (329)
T ss_dssp ----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHHHH---HH---HTC
T ss_pred cceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHHHHH---HH---cCC
Confidence 99876432 123467889999999999999999999999999999999 9999987654333222 21 111
Q ss_pred cccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCC
Q 006922 547 WTAEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPN 600 (625)
Q Consensus 547 ~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~ 600 (625)
. .+.+..+..++.+++.+||+.||++||||+||++.|+.+.+.
T Consensus 278 ~-----------~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~ 320 (329)
T 4aoj_A 278 E-----------LERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA 320 (329)
T ss_dssp C-----------CCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred C-----------CCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhC
Confidence 0 111222345678889999999999999999999999998654
No 3
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=1.4e-54 Score=440.93 Aligned_cols=250 Identities=25% Similarity=0.417 Sum_probs=205.0
Q ss_pred hHcccCCceeEEEEEEc------CCcEEEEEEeccccC-ChHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEecc
Q 006922 330 EVLGKGTFGMAYKAILE------DGTTVVVKRLKDVNV-GKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYS 402 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 402 (625)
+.||+|+||+||+|++. +++.||||+++.... ..++|.+|+++|++++|||||+++|+|.+.+..++|||||+
T Consensus 19 ~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey~~ 98 (299)
T 4asz_A 19 RELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMK 98 (299)
T ss_dssp EEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred eEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEEEEcCC
Confidence 56999999999999853 478899999986532 24679999999999999999999999999999999999999
Q ss_pred CCChhhhhcccc--------CCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEeccccc
Q 006922 403 LGSVSAMLHSER--------GEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLT 474 (625)
Q Consensus 403 ~g~L~~~l~~~~--------~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla 474 (625)
+|+|.++++... ......++|.++.+|+.|+|+||+|||+++ ||||||||+|||+++++.+||+|||+|
T Consensus 99 ~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDlKp~NILl~~~~~~Ki~DFGla 175 (299)
T 4asz_A 99 HGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQH---FVHRDLATRNCLVGENLLVKIGDFGMS 175 (299)
T ss_dssp TCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCSCH
T ss_pred CCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCccCHhhEEECCCCcEEECCcccc
Confidence 999999997642 122346999999999999999999999987 999999999999999999999999999
Q ss_pred ccccccc-----cccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHh-CCCCCCCCCCcchhhHHHHHHHHhhcccc
Q 006922 475 TITSALA-----PVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWT 548 (625)
Q Consensus 475 ~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 548 (625)
+...... ....||+.|||||++.+..|+.++|||||||++|||+| |+.||.+....+....+ . .+..
T Consensus 176 ~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i---~---~~~~- 248 (299)
T 4asz_A 176 RDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECI---T---QGRV- 248 (299)
T ss_dssp HHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHH---H---HTCC-
T ss_pred eecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH---H---cCCC-
Confidence 8764322 22357889999999999999999999999999999999 99999876543332222 1 1110
Q ss_pred cccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCC
Q 006922 549 AEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRP 599 (625)
Q Consensus 549 ~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~ 599 (625)
.+.+..+..++.+++.+||+.||++||||+||++.|+++..
T Consensus 249 ----------~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~ 289 (299)
T 4asz_A 249 ----------LQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAK 289 (299)
T ss_dssp ----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ----------CCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 11122234567888999999999999999999999998754
No 4
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=6.8e-53 Score=428.68 Aligned_cols=249 Identities=27% Similarity=0.427 Sum_probs=198.1
Q ss_pred HhHcccCCceeEEEEEEcCCcEEEEEEeccccCC---hHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccCCC
Q 006922 329 AEVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVG---KRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLGS 405 (625)
Q Consensus 329 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 405 (625)
.+.||+|+||+||+|++. ..||||+++..... .+.|.+|++++++++|||||+++|+|.. +..+||||||++|+
T Consensus 41 ~~~iG~G~fG~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmEy~~gGs 117 (307)
T 3omv_A 41 STRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQWCEGSS 117 (307)
T ss_dssp EEECCCCSSSEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEECCSSCB
T ss_pred eeEEeeCCCcEEEEEEEC--CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEEcCCCCC
Confidence 367999999999999865 36999999865433 3578999999999999999999998864 56899999999999
Q ss_pred hhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEeccccccccccc-----
Q 006922 406 VSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSAL----- 480 (625)
Q Consensus 406 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~----- 480 (625)
|.++++.... .++|.++..|+.|+|+||+|||+++ ||||||||+||||++++.+||+|||+|+.....
T Consensus 118 L~~~l~~~~~----~l~~~~~~~i~~qia~gL~yLH~~~---IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~ 190 (307)
T 3omv_A 118 LYKHLHVQET----KFQMFQLIDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQ 190 (307)
T ss_dssp HHHHHHTSCC----CCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCCSSSEEEETTEEEEECCCSSCBC---------
T ss_pred HHHHHhhcCC----CCCHHHHHHHHHHHHHHHHHHHHCC---ccCCccCHHHEEECCCCcEEEeeccCceecccCCccee
Confidence 9999976432 4999999999999999999999987 999999999999999999999999999875421
Q ss_pred ccccccCCCcCCccccCC---CCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhccccccccccccc
Q 006922 481 APVIARAAGYRAPEVTDS---RKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELL 557 (625)
Q Consensus 481 ~~~~~~~~~y~aPE~~~~---~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 557 (625)
.....||+.|||||++.+ ..|+.++|||||||++|||+||+.||.+....+.. ... +..+ ...+...
T Consensus 191 ~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~--~~~----~~~~----~~~p~~~ 260 (307)
T 3omv_A 191 VEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQI--IFM----VGRG----YASPDLS 260 (307)
T ss_dssp ---CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHH--HHH----HHTT----CCCCCST
T ss_pred ecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHH--HHH----HhcC----CCCCCcc
Confidence 234578999999999853 46899999999999999999999999765433221 111 1111 1111111
Q ss_pred CCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCC
Q 006922 558 RYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRP 599 (625)
Q Consensus 558 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~ 599 (625)
. ....+..++.+++.+||+.||++||||.||++.|+.++.
T Consensus 261 ~--~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~ 300 (307)
T 3omv_A 261 K--LYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQH 300 (307)
T ss_dssp T--SCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHT
T ss_pred c--ccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhc
Confidence 1 112234567788899999999999999999999998864
No 5
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=7.6e-53 Score=430.77 Aligned_cols=261 Identities=23% Similarity=0.315 Sum_probs=198.4
Q ss_pred hHcccCCceeEEEEEEcCCcEEEEEEeccccCChHHHHHHHHHHHcCCCCceecceeEEEecC----ceEEEEEeccCCC
Q 006922 330 EVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYYSKD----EKLMVYDYYSLGS 405 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----~~~lv~e~~~~g~ 405 (625)
+.||+|+||+||+|++ +|+.||||+++........++.|+..+.+++|||||+++|+|...+ ..+||||||++|+
T Consensus 9 ~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~~~gs 87 (303)
T 3hmm_A 9 ESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGS 87 (303)
T ss_dssp EEEEECSSSEEEEEEE-TTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCB
T ss_pred EEEeeCCCeEEEEEEE-CCEEEEEEEECccchhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecCCCCCc
Confidence 5699999999999998 5899999999764432233445666667889999999999998764 5799999999999
Q ss_pred hhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcC-----CCCceecCCCCCCEEeCCCCCeeEeccccccccccc
Q 006922 406 VSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAAN-----GGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSAL 480 (625)
Q Consensus 406 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~-----~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~ 480 (625)
|.++++.. .++|..+.+++.|+++||+|||++. .++||||||||+||||+.++++||+|||+|+.....
T Consensus 88 L~~~l~~~------~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~ 161 (303)
T 3hmm_A 88 LFDYLNRY------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSA 161 (303)
T ss_dssp HHHHHHHC------CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEETT
T ss_pred HHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccccCC
Confidence 99999764 3899999999999999999999872 345999999999999999999999999999876432
Q ss_pred c-------cccccCCCcCCccccCCC------CCCCccchhhhHHHHHHHHhCCCCCCCCCCcchh--------hHHHHH
Q 006922 481 A-------PVIARAAGYRAPEVTDSR------KATQASDVYSFGVVLLEILTGKSPIHTTGGDELV--------HLVRWV 539 (625)
Q Consensus 481 ~-------~~~~~~~~y~aPE~~~~~------~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~--------~~~~~~ 539 (625)
. ....||+.|||||++.+. .++.++|||||||++|||+||+.||......+.. .....+
T Consensus 162 ~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~ 241 (303)
T 3hmm_A 162 TDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEM 241 (303)
T ss_dssp TTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHH
T ss_pred CCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHHHH
Confidence 2 234689999999998764 3678999999999999999998877543221110 001111
Q ss_pred HHHhhcccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCC
Q 006922 540 HSVVREEWTAEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPND 601 (625)
Q Consensus 540 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~ 601 (625)
...+.++ ..++.........+....+.+++.+||+.||++||||.||++.|+++.++.
T Consensus 242 ~~~~~~~----~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~~ 299 (303)
T 3hmm_A 242 RKVVCEQ----KLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299 (303)
T ss_dssp HHHHTTS----CCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred HHHHhcc----cCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHHc
Confidence 1111111 112222111122345667889999999999999999999999999987653
No 6
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=1.6e-51 Score=423.82 Aligned_cols=239 Identities=20% Similarity=0.355 Sum_probs=199.9
Q ss_pred hHcccCCceeEEEEEEc-CCcEEEEEEeccccC-ChHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccCCChh
Q 006922 330 EVLGKGTFGMAYKAILE-DGTTVVVKRLKDVNV-GKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLGSVS 407 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~ 407 (625)
+.||+|+||+||+|... +|+.||||+++.... ..+.+.+|+++|++++|||||+++++|.+.+..|||||||++|+|.
T Consensus 80 ~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L~ 159 (346)
T 4fih_A 80 IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 159 (346)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCCTTEEHH
T ss_pred EEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCCCcHH
Confidence 46999999999999964 699999999975433 3467899999999999999999999999999999999999999999
Q ss_pred hhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEeccccccccccc---cccc
Q 006922 408 AMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSAL---APVI 484 (625)
Q Consensus 408 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~---~~~~ 484 (625)
+++... .+++..+..++.||+.||+|||+++ ||||||||+|||++.++.+||+|||+|+..... ....
T Consensus 160 ~~l~~~------~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~ 230 (346)
T 4fih_A 160 DIVTHT------RMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSL 230 (346)
T ss_dssp HHHHHS------CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCCC
T ss_pred HHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEECCCCCEEEecCcCceecCCCCCccccc
Confidence 999753 3899999999999999999999998 999999999999999999999999999876432 3456
Q ss_pred ccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccccccccccCCCCcHH
Q 006922 485 ARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIEE 564 (625)
Q Consensus 485 ~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 564 (625)
.||+.|||||++.+..|+.++||||+||++|||++|+.||.+.+..+.. ..+. ..... . .+....
T Consensus 231 ~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~---~~i~----~~~~~-----~---~~~~~~ 295 (346)
T 4fih_A 231 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM---KMIR----DNLPP-----R---LKNLHK 295 (346)
T ss_dssp CSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH---HHHH----HSSCC-----C---CSCGGG
T ss_pred ccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHH---HHHH----cCCCC-----C---CCcccc
Confidence 8999999999999999999999999999999999999999765433222 2221 11100 0 111122
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006922 565 EMVEMLQIAMSCVVRMPDQRPKMPDVVR 592 (625)
Q Consensus 565 ~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 592 (625)
...++.+++.+||+.||++|||++|+++
T Consensus 296 ~s~~~~dli~~~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 296 VSPSLKGFLDRLLVRDPAQRATAAELLK 323 (346)
T ss_dssp SCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 2345677888999999999999999976
No 7
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=2.1e-51 Score=423.64 Aligned_cols=241 Identities=20% Similarity=0.391 Sum_probs=194.9
Q ss_pred HhHcccCCceeEEEEEE-cCCcEEEEEEeccccCC---hHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccCC
Q 006922 329 AEVLGKGTFGMAYKAIL-EDGTTVVVKRLKDVNVG---KRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLG 404 (625)
Q Consensus 329 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 404 (625)
.+.||+|+||+||+|+. .+|+.||||+++..... .+.+.+|++++++++|||||++++++.+.+..|+|||||++|
T Consensus 29 ~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmEy~~gg 108 (350)
T 4b9d_A 29 LQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGG 108 (350)
T ss_dssp EEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTC
T ss_pred eEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEeCCCCC
Confidence 35799999999999995 47999999999765433 356899999999999999999999999999999999999999
Q ss_pred ChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEeccccccccccc---c
Q 006922 405 SVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSAL---A 481 (625)
Q Consensus 405 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~---~ 481 (625)
+|.+++...+ ...+++.++..|+.||+.||+|||+++ ||||||||+||||+.++.+||+|||+|+..... .
T Consensus 109 ~L~~~i~~~~---~~~~~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~ 182 (350)
T 4b9d_A 109 DLFKRINAQK---GVLFQEDQILDWFVQICLALKHVHDRK---ILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELA 182 (350)
T ss_dssp BHHHHHHHTT---TCCCCHHHHHHHHHHHHHHHHHHHHTT---CEETTCCGGGEEECTTCCEEECSTTEESCCCHHHHHH
T ss_pred cHHHHHHHcC---CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCHHHEEECCCCCEEEcccccceeecCCcccc
Confidence 9999997543 234789999999999999999999998 999999999999999999999999999987543 2
Q ss_pred cccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccccccccccCCCC
Q 006922 482 PVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPN 561 (625)
Q Consensus 482 ~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 561 (625)
....||+.|||||++.+..|+.++||||+||++|||+||+.||.+.+..+... ........ +.
T Consensus 183 ~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~------~i~~~~~~-----------~~ 245 (350)
T 4b9d_A 183 RACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVL------KIISGSFP-----------PV 245 (350)
T ss_dssp HHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH------HHHHTCCC-----------CC
T ss_pred cccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHH------HHHcCCCC-----------CC
Confidence 34579999999999999999999999999999999999999997654322221 11122110 00
Q ss_pred cHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006922 562 IEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR 592 (625)
Q Consensus 562 ~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 592 (625)
......++.+++.+||+.||++|||++|+++
T Consensus 246 ~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 246 SLHYSYDLRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 1112235677888999999999999999986
No 8
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=1.9e-51 Score=422.02 Aligned_cols=244 Identities=18% Similarity=0.206 Sum_probs=201.0
Q ss_pred hHcccCCceeEEEEEEc-CCcEEEEEEeccccCChHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccCCChhh
Q 006922 330 EVLGKGTFGMAYKAILE-DGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLGSVSA 408 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~ 408 (625)
+.||+|+||+||+|+.. +|+.||||+++... ...+|++++++++|||||++++++.+.+..+||||||++|+|.+
T Consensus 64 ~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~----~~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L~~ 139 (336)
T 4g3f_A 64 PRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEV----FRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQ 139 (336)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEETTT----CCTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCTTCBHHH
T ss_pred cEeccCCCeEEEEEEECCCCCEEEEEEECHHH----hHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCCCcHHH
Confidence 46999999999999964 69999999997643 23479999999999999999999999999999999999999999
Q ss_pred hhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCC-CeeEeccccccccccc-------
Q 006922 409 MLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQ-YGCVSDLGLTTITSAL------- 480 (625)
Q Consensus 409 ~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~-~~kl~DfGla~~~~~~------- 480 (625)
+++... .+++..+..++.|++.||+|||+++ ||||||||+||||+.++ ++||+|||+|+.....
T Consensus 140 ~l~~~~-----~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~~~ 211 (336)
T 4g3f_A 140 LIKQMG-----CLPEDRALYYLGQALEGLEYLHTRR---ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLL 211 (336)
T ss_dssp HHHHHS-----SCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCCGGGEEECTTSCCEEECCCTTCEEC----------
T ss_pred HHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---ceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCccccee
Confidence 998653 4999999999999999999999998 99999999999999987 6999999999876432
Q ss_pred -ccccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccccccccccCC
Q 006922 481 -APVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRY 559 (625)
Q Consensus 481 -~~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 559 (625)
.....||+.|||||++.+..|+.++|||||||++|||+||+.||.+....+....+. .+... . .. ..
T Consensus 212 ~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~------~~~~~--~--~~--~~ 279 (336)
T 4g3f_A 212 TGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIA------SEPPP--I--RE--IP 279 (336)
T ss_dssp --CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHH------HSCCG--G--GG--SC
T ss_pred cCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHH------cCCCC--c--hh--cC
Confidence 123469999999999999999999999999999999999999998766555443222 11100 0 00 01
Q ss_pred CCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCC
Q 006922 560 PNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPN 600 (625)
Q Consensus 560 ~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~ 600 (625)
+. ...++.+++.+||++||++|||+.|+++.|.....+
T Consensus 280 ~~---~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~ 317 (336)
T 4g3f_A 280 PS---CAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQE 317 (336)
T ss_dssp TT---SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred cc---CCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhh
Confidence 11 223566777899999999999999999988776543
No 9
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=1.8e-50 Score=407.93 Aligned_cols=241 Identities=23% Similarity=0.412 Sum_probs=193.3
Q ss_pred hHcccCCceeEEEEEEc-CCcEEEEEEeccccCC---hHHHHHHHHHHHcCCCCceecceeEEEe----cCceEEEEEec
Q 006922 330 EVLGKGTFGMAYKAILE-DGTTVVVKRLKDVNVG---KRDFEQQMEIVGSIRHENVVELKAYYYS----KDEKLMVYDYY 401 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~~lv~e~~ 401 (625)
+.||+|+||+||+|... ++..||+|++...... .+.|.+|++++++++|||||+++++|.+ .+..++|||||
T Consensus 32 ~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvmEy~ 111 (290)
T 3fpq_A 32 IEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELM 111 (290)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEEECC
T ss_pred eEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEEeCC
Confidence 45999999999999964 6899999999765433 3568999999999999999999999875 24579999999
Q ss_pred cCCChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCC-CCCeeEeccccccccccc
Q 006922 402 SLGSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNS-QQYGCVSDLGLTTITSAL 480 (625)
Q Consensus 402 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~-~~~~kl~DfGla~~~~~~ 480 (625)
++|+|.+++.... .+++..+..++.||+.||+|||+++ ++||||||||+|||++. ++.+||+|||+|+.....
T Consensus 112 ~gg~L~~~l~~~~-----~l~~~~~~~~~~qi~~aL~ylH~~~-~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~~ 185 (290)
T 3fpq_A 112 TSGTLKTYLKRFK-----VMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS 185 (290)
T ss_dssp CSCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCTT
T ss_pred CCCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC-CCEEecccChhheeEECCCCCEEEEeCcCCEeCCCC
Confidence 9999999998653 4899999999999999999999875 35999999999999985 789999999999865433
Q ss_pred -ccccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccccccccccCC
Q 006922 481 -APVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRY 559 (625)
Q Consensus 481 -~~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 559 (625)
.....||+.|||||++.+ .|+.++|||||||++|||+||+.||.+.... ..+...+ ..+.....++ .
T Consensus 186 ~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~--~~~~~~i----~~~~~~~~~~----~- 253 (290)
T 3fpq_A 186 FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNA--AQIYRRV----TSGVKPASFD----K- 253 (290)
T ss_dssp SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSH--HHHHHHH----TTTCCCGGGG----G-
T ss_pred ccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcH--HHHHHHH----HcCCCCCCCC----c-
Confidence 345679999999999875 6999999999999999999999999754322 1222211 1111110011 0
Q ss_pred CCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006922 560 PNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR 592 (625)
Q Consensus 560 ~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 592 (625)
. ...++.+++.+||+.||++|||++|+++
T Consensus 254 -~---~~~~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 254 -V---AIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp -C---CCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred -c---CCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 1 1124667888999999999999999975
No 10
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=4.4e-51 Score=424.31 Aligned_cols=253 Identities=27% Similarity=0.362 Sum_probs=204.4
Q ss_pred HhHcccCCceeEEEEEEcC------CcEEEEEEeccccC--ChHHHHHHHHHHHcCCC-CceecceeEEEec-CceEEEE
Q 006922 329 AEVLGKGTFGMAYKAILED------GTTVVVKRLKDVNV--GKRDFEQQMEIVGSIRH-ENVVELKAYYYSK-DEKLMVY 398 (625)
Q Consensus 329 ~~~lg~G~~g~Vy~~~~~~------g~~vavK~l~~~~~--~~~~~~~e~~~l~~l~h-~niv~l~~~~~~~-~~~~lv~ 398 (625)
.+.||+|+||+||+|.... ++.||||+++.... ..+.|.+|+++|.+++| ||||+++|+|... +..++||
T Consensus 69 ~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~~~~iV~ 148 (353)
T 4ase_A 69 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIV 148 (353)
T ss_dssp EEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEEE
T ss_pred eeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCCEEEEEE
Confidence 4679999999999998532 36899999986533 23679999999999965 8999999999765 5689999
Q ss_pred EeccCCChhhhhccccCC-----------CCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCee
Q 006922 399 DYYSLGSVSAMLHSERGE-----------GRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGC 467 (625)
Q Consensus 399 e~~~~g~L~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~k 467 (625)
|||++|+|.++|+..... ....++|.++..++.|||+||+|||+++ ||||||||+|||+++++.+|
T Consensus 149 Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~---iiHRDLK~~NILl~~~~~vK 225 (353)
T 4ase_A 149 EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVK 225 (353)
T ss_dssp ECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEE
T ss_pred EcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCC---eecCccCccceeeCCCCCEE
Confidence 999999999999764321 1335899999999999999999999998 99999999999999999999
Q ss_pred Eecccccccccccc-----cccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHh-CCCCCCCCCCcchhhHHHHHHH
Q 006922 468 VSDLGLTTITSALA-----PVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHS 541 (625)
Q Consensus 468 l~DfGla~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~ 541 (625)
|+|||+|+...... ....||+.|||||++.+..|+.++|||||||++|||+| |+.||.+....+.. ...+.
T Consensus 226 i~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~~--~~~i~- 302 (353)
T 4ase_A 226 ICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF--CRRLK- 302 (353)
T ss_dssp ECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHH--HHHHH-
T ss_pred ECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHHHH--HHHHH-
Confidence 99999998764322 23457888999999999999999999999999999998 99999876543321 11111
Q ss_pred HhhcccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCC
Q 006922 542 VVREEWTAEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPN 600 (625)
Q Consensus 542 ~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~ 600 (625)
.+. +.+.++....++.+++.+||+.||++||||.||++.|+.+.+.
T Consensus 303 ---~g~----------~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~ 348 (353)
T 4ase_A 303 ---EGT----------RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 348 (353)
T ss_dssp ---HTC----------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ---cCC----------CCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHH
Confidence 111 1111122344678888999999999999999999999988653
No 11
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=2.7e-50 Score=424.77 Aligned_cols=239 Identities=20% Similarity=0.351 Sum_probs=199.7
Q ss_pred hHcccCCceeEEEEEEc-CCcEEEEEEeccccC-ChHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccCCChh
Q 006922 330 EVLGKGTFGMAYKAILE-DGTTVVVKRLKDVNV-GKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLGSVS 407 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~ 407 (625)
+.||+|+||+||+|... +|+.||||++..... ..+.+.+|+++|++++|||||+++++|.+.+..|||||||++|+|.
T Consensus 157 ~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~~gG~L~ 236 (423)
T 4fie_A 157 IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 236 (423)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEEHH
T ss_pred eEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCCCCCcHH
Confidence 56999999999999964 699999999976533 3467899999999999999999999999999999999999999999
Q ss_pred hhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEeccccccccccc---cccc
Q 006922 408 AMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSAL---APVI 484 (625)
Q Consensus 408 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~---~~~~ 484 (625)
+++... .+++.++..|+.||+.||+|||+++ ||||||||+||||+.++.+||+|||+|+..... ....
T Consensus 237 ~~i~~~------~l~e~~~~~~~~qil~aL~ylH~~~---IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~ 307 (423)
T 4fie_A 237 DIVTHT------RMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSL 307 (423)
T ss_dssp HHHHHS------CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCCBCCC
T ss_pred HHHhcc------CCCHHHHHHHHHHHHHHHHHHHHCC---eecccCCHHHEEEcCCCCEEEecCccceECCCCCcccccc
Confidence 999753 2899999999999999999999998 999999999999999999999999999876432 3456
Q ss_pred ccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccccccccccCCCCcHH
Q 006922 485 ARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIEE 564 (625)
Q Consensus 485 ~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 564 (625)
+||+.|||||++.+..|+.++|||||||++|||++|+.||.+....+.. ..+. .... +........
T Consensus 308 ~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~---~~i~----~~~~-----~~~~~~~~~-- 373 (423)
T 4fie_A 308 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM---KMIR----DNLP-----PRLKNLHKV-- 373 (423)
T ss_dssp EECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH---HHHH----HSCC-----CCCSCTTSS--
T ss_pred ccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHH---HHHH----cCCC-----CCCcccccC--
Confidence 7999999999999999999999999999999999999999765433222 2221 1110 111111122
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006922 565 EMVEMLQIAMSCVVRMPDQRPKMPDVVR 592 (625)
Q Consensus 565 ~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 592 (625)
..++.+++.+||+.||++|||+.|+++
T Consensus 374 -s~~~~dli~~~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 374 -SPSLKGFLDRLLVRDPAQRATAAELLK 400 (423)
T ss_dssp -CHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred -CHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 235667778999999999999999976
No 12
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=1.6e-50 Score=410.24 Aligned_cols=237 Identities=16% Similarity=0.299 Sum_probs=198.4
Q ss_pred HhHcccCCceeEEEEEE-cCCcEEEEEEecccc----CChHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccC
Q 006922 329 AEVLGKGTFGMAYKAIL-EDGTTVVVKRLKDVN----VGKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSL 403 (625)
Q Consensus 329 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 403 (625)
.+.||+|+||+||+|+. .+|+.||||++.+.. ...+.+.+|++++++++|||||++++++.+.+..++||||+++
T Consensus 37 ~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivmEy~~g 116 (311)
T 4aw0_A 37 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKN 116 (311)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred EEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCC
Confidence 36799999999999995 479999999997532 2346789999999999999999999999999999999999999
Q ss_pred CChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEeccccccccccc---
Q 006922 404 GSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSAL--- 480 (625)
Q Consensus 404 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~--- 480 (625)
|+|.+++.... .+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+|+.....
T Consensus 117 G~L~~~i~~~~-----~l~e~~~~~~~~qi~~al~ylH~~~---IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~ 188 (311)
T 4aw0_A 117 GELLKYIRKIG-----SFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 188 (311)
T ss_dssp EEHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTC
T ss_pred CCHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCc
Confidence 99999998653 3899999999999999999999998 999999999999999999999999999876422
Q ss_pred --ccccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccccccccccC
Q 006922 481 --APVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLR 558 (625)
Q Consensus 481 --~~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 558 (625)
....+||+.|||||++.+..|+.++||||+||++|||+||+.||.+.+..+....+ ..... ..
T Consensus 189 ~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i------~~~~~-------~~-- 253 (311)
T 4aw0_A 189 ARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKI------IKLEY-------DF-- 253 (311)
T ss_dssp CCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH------HHTCC-------CC--
T ss_pred ccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH------HcCCC-------CC--
Confidence 23457999999999999999999999999999999999999999765433322211 11110 00
Q ss_pred CCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHH
Q 006922 559 YPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVV 591 (625)
Q Consensus 559 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~ 591 (625)
+ +....++.+++.+|++.||++|||++|+.
T Consensus 254 -p--~~~s~~~~dli~~lL~~dp~~R~t~~e~~ 283 (311)
T 4aw0_A 254 -P--EKFFPKARDLVEKLLVLDATKRLGCEEME 283 (311)
T ss_dssp -C--TTCCHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred -C--cccCHHHHHHHHHHccCCHhHCcChHHHc
Confidence 1 11123566778899999999999999874
No 13
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.1e-49 Score=398.80 Aligned_cols=236 Identities=20% Similarity=0.314 Sum_probs=184.0
Q ss_pred hHcccCCceeEEEEEE-cCCcEEEEEEeccccC----ChHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccCC
Q 006922 330 EVLGKGTFGMAYKAIL-EDGTTVVVKRLKDVNV----GKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLG 404 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~----~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 404 (625)
+.||+|+||+||+|.. .+|+.||||++++... ..+.+.+|++++++++|||||++++++.+.+..++||||+ +|
T Consensus 19 ~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~-~g 97 (275)
T 3hyh_A 19 KTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-GN 97 (275)
T ss_dssp EEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECC-CE
T ss_pred EEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEeCC-CC
Confidence 5799999999999995 4799999999975432 2356899999999999999999999999999999999999 67
Q ss_pred ChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEeccccccccccc--cc
Q 006922 405 SVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSAL--AP 482 (625)
Q Consensus 405 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~--~~ 482 (625)
+|.+++.... .+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+|+..... ..
T Consensus 98 ~L~~~l~~~~-----~l~e~~~~~~~~qi~~al~ylH~~~---IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~~~ 169 (275)
T 3hyh_A 98 ELFDYIVQRD-----KMSEQEARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLK 169 (275)
T ss_dssp EHHHHHHHSC-----SCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCTTTEEECTTCCEEECCSSCC----------
T ss_pred CHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---cccccCChHHeEECCCCCEEEeecCCCeecCCCCccC
Confidence 9999987643 4999999999999999999999998 999999999999999999999999999876432 23
Q ss_pred ccccCCCcCCccccCCCCC-CCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccccccccccCCCC
Q 006922 483 VIARAAGYRAPEVTDSRKA-TQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPN 561 (625)
Q Consensus 483 ~~~~~~~y~aPE~~~~~~~-~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 561 (625)
...||+.|||||++.+..| +.++||||+||++|||+||+.||.+.+..+. .+.+. .... . .+
T Consensus 170 ~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~---~~~i~---~~~~-------~---~p- 232 (275)
T 3hyh_A 170 TSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVL---FKNIS---NGVY-------T---LP- 232 (275)
T ss_dssp -----CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH---HHHHH---HTCC-------C---CC-
T ss_pred CeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHH---HHHHH---cCCC-------C---CC-
Confidence 4679999999999998876 5799999999999999999999976433222 22111 1110 0 01
Q ss_pred cHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006922 562 IEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR 592 (625)
Q Consensus 562 ~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 592 (625)
.....++.+++.+|++.||++|||++|+++
T Consensus 233 -~~~s~~~~~li~~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 233 -KFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp -TTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred -CCCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence 111235667788999999999999999986
No 14
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=7.7e-50 Score=405.26 Aligned_cols=233 Identities=21% Similarity=0.317 Sum_probs=187.3
Q ss_pred HhHcccCCceeEEEEEEc----CCcEEEEEEeccccC---ChHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEec
Q 006922 329 AEVLGKGTFGMAYKAILE----DGTTVVVKRLKDVNV---GKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYY 401 (625)
Q Consensus 329 ~~~lg~G~~g~Vy~~~~~----~g~~vavK~l~~~~~---~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 401 (625)
.+.||+|+||+||+|+.. .++.||||+++.... ....+.+|++++.+++|||||++++++.+.+..++|||||
T Consensus 29 ~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivmEy~ 108 (304)
T 3ubd_A 29 LKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFL 108 (304)
T ss_dssp EEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEEEECCC
T ss_pred EEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEEcC
Confidence 367999999999999852 478999999976432 2346889999999999999999999999999999999999
Q ss_pred cCCChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEecccccccccc--
Q 006922 402 SLGSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSA-- 479 (625)
Q Consensus 402 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~-- 479 (625)
++|+|.+++.... .+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+|+....
T Consensus 109 ~gg~L~~~l~~~~-----~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~ 180 (304)
T 3ubd_A 109 RGGDLFTRLSKEV-----MFTEEDVKFYLAELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE 180 (304)
T ss_dssp TTCEEHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECTTSCEEEESSEEEEC-----
T ss_pred CCCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHeEEcCCCCEEecccccceeccCCC
Confidence 9999999998653 4899999999999999999999998 99999999999999999999999999986532
Q ss_pred -cccccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccccccccccC
Q 006922 480 -LAPVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLR 558 (625)
Q Consensus 480 -~~~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 558 (625)
......||+.|||||++.+..|+.++||||+||++|||+||+.||.+.+..+....+ .....
T Consensus 181 ~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i------~~~~~----------- 243 (304)
T 3ubd_A 181 KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMI------LKAKL----------- 243 (304)
T ss_dssp CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH------HHCCC-----------
T ss_pred ccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHHH------HcCCC-----------
Confidence 233467999999999999999999999999999999999999999865443332221 11110
Q ss_pred CCCcHHHHHHHHHHHHHccCCCCCCCCCH
Q 006922 559 YPNIEEEMVEMLQIAMSCVVRMPDQRPKM 587 (625)
Q Consensus 559 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~ 587 (625)
+.+.....++.+++.+||+.||++|||+
T Consensus 244 -~~p~~~s~~~~~li~~~L~~dP~~R~ta 271 (304)
T 3ubd_A 244 -GMPQFLSPEAQSLLRMLFKRNPANRLGA 271 (304)
T ss_dssp -CCCTTSCHHHHHHHHHHTCSSGGGSTTC
T ss_pred -CCCCcCCHHHHHHHHHHcccCHHHCCCC
Confidence 0011122356677889999999999985
No 15
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=1.8e-47 Score=389.32 Aligned_cols=239 Identities=20% Similarity=0.322 Sum_probs=182.6
Q ss_pred hHcccCCceeEEEEEE-cCCcEEEEEEeccccC--ChHHHHHHHHHHHcCCCCceecceeEEEecCc------------e
Q 006922 330 EVLGKGTFGMAYKAIL-EDGTTVVVKRLKDVNV--GKRDFEQQMEIVGSIRHENVVELKAYYYSKDE------------K 394 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~------------~ 394 (625)
+.||+|+||+||+|+. .+|+.||||+++.... ..+.+.+|+++|++++|||||++++++.+.+. .
T Consensus 11 ~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~~~~~l 90 (299)
T 4g31_A 11 QCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYL 90 (299)
T ss_dssp EEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC----------CEEE
T ss_pred eEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccCCCcEE
Confidence 5799999999999995 4799999999975432 23568999999999999999999999876543 6
Q ss_pred EEEEEeccCCChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEeccccc
Q 006922 395 LMVYDYYSLGSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLT 474 (625)
Q Consensus 395 ~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla 474 (625)
++||||+++|+|.+++.... .....++..+..|+.|++.||+|||+++ |+||||||+|||++.++.+||+|||+|
T Consensus 91 ~ivmE~~~gg~L~~~l~~~~--~~~~~~~~~~~~i~~qi~~al~ylH~~~---IiHRDlKp~NILl~~~~~vKl~DFGla 165 (299)
T 4g31_A 91 YIQMQLCRKENLKDWMNGRC--TIEERERSVCLHIFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLV 165 (299)
T ss_dssp EEEEECCCSCCHHHHHHTCC--SGGGSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECCCCCC
T ss_pred EEEEecCCCCcHHHHHHhcC--CCChhHHHHHHHHHHHHHHHHHHHHHCc---CccccCcHHHeEECCCCcEEEccCccc
Confidence 89999999999999997643 2234677888999999999999999998 999999999999999999999999999
Q ss_pred ccccccc---------------cccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHH
Q 006922 475 TITSALA---------------PVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWV 539 (625)
Q Consensus 475 ~~~~~~~---------------~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~ 539 (625)
+...... ....||+.|||||++.+..|+.++|||||||++|||++ ||... .+....+.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~--~~~~~~~~-- 238 (299)
T 4g31_A 166 TAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQ--MERVRTLT-- 238 (299)
T ss_dssp --------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSH--HHHHHHHH--
T ss_pred eecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCc--cHHHHHHH--
Confidence 8764321 22468999999999999999999999999999999996 77531 11111111
Q ss_pred HHHhhcccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006922 540 HSVVREEWTAEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR 592 (625)
Q Consensus 540 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 592 (625)
.. ..... .+..........+++.+||+.||++|||+.|+++
T Consensus 239 -~~-~~~~~----------p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 239 -DV-RNLKF----------PPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp -HH-HTTCC----------CHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred -HH-hcCCC----------CCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 11 11100 0111223345567888999999999999999986
No 16
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.5e-45 Score=389.25 Aligned_cols=254 Identities=21% Similarity=0.305 Sum_probs=193.1
Q ss_pred hHcccCCceeEEEEEE-cCCcEEEEEEeccccCC---hHHHHHHHHHHHcCCCCceecceeEEEec------CceEEEEE
Q 006922 330 EVLGKGTFGMAYKAIL-EDGTTVVVKRLKDVNVG---KRDFEQQMEIVGSIRHENVVELKAYYYSK------DEKLMVYD 399 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~~~~lv~e 399 (625)
+.||+|+||+||+|.. .+|+.||||+++..... .+.+.+|+++|++++|||||++++++... +..|+|||
T Consensus 60 ~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~~ivmE 139 (398)
T 4b99_A 60 ETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLD 139 (398)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCCEEEEEE
T ss_pred EEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCEEEEEEe
Confidence 5799999999999995 47999999999865433 24678999999999999999999997643 57899999
Q ss_pred eccCCChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEecccccccccc
Q 006922 400 YYSLGSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSA 479 (625)
Q Consensus 400 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~ 479 (625)
||+ |+|.+++.... .+++..+..++.||+.||+|||+++ ||||||||+|||++.++.+||+|||+|+....
T Consensus 140 ~~~-g~L~~~i~~~~-----~l~~~~~~~~~~qil~al~ylH~~~---iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~ 210 (398)
T 4b99_A 140 LME-SDLHQIIHSSQ-----PLTLEHVRYFLYQLLRGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCT 210 (398)
T ss_dssp CCS-EEHHHHHTSSS-----CCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTCCEEECCCTTCBCC--
T ss_pred CCC-CCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCc---CcCCCcCccccccCCCCCEEEeecceeeeccc
Confidence 996 68999987543 4999999999999999999999998 99999999999999999999999999986532
Q ss_pred -------cccccccCCCcCCccccCCC-CCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhccccccc
Q 006922 480 -------LAPVIARAAGYRAPEVTDSR-KATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEV 551 (625)
Q Consensus 480 -------~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 551 (625)
......||+.|||||++.+. .|+.++||||+||++|||++|++||.+.+..+....+..............+
T Consensus 211 ~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~~ 290 (398)
T 4b99_A 211 SPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAV 290 (398)
T ss_dssp -----CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC--
T ss_pred CccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhh
Confidence 22345799999999998765 5699999999999999999999999875543333222211100000000000
Q ss_pred cc-------cccc-CCCCc-H----HHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006922 552 FD-------VELL-RYPNI-E----EEMVEMLQIAMSCVVRMPDQRPKMPDVVR 592 (625)
Q Consensus 552 ~d-------~~~~-~~~~~-~----~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 592 (625)
.. .... ..+.. . ....++.+++.+||..||++|||+.|+++
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 344 (398)
T 4b99_A 291 GAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR 344 (398)
T ss_dssp ---CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred hhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 00 0000 00000 0 01235677888999999999999999986
No 17
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=2.3e-44 Score=376.13 Aligned_cols=187 Identities=25% Similarity=0.418 Sum_probs=162.8
Q ss_pred hHcccCCceeEEEEEEc----CCcEEEEEEeccccCChHHHHHHHHHHHcC-CCCceecceeEEEecCceEEEEEeccCC
Q 006922 330 EVLGKGTFGMAYKAILE----DGTTVVVKRLKDVNVGKRDFEQQMEIVGSI-RHENVVELKAYYYSKDEKLMVYDYYSLG 404 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~----~g~~vavK~l~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~g 404 (625)
+.||+|+||+||+|+.+ .++.||+|++.... ....+.+|++++..+ +|||||++++++.+.+..++||||+++|
T Consensus 27 ~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~-~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvmE~~~g~ 105 (361)
T 4f9c_A 27 DKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS-HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHE 105 (361)
T ss_dssp EEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS-CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEEECCCCC
T ss_pred EEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc-CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEEEeCCCcc
Confidence 57999999999999843 46789999987643 345688999999988 6999999999999999999999999999
Q ss_pred ChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCC-CCeeEeccccccccccc---
Q 006922 405 SVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQ-QYGCVSDLGLTTITSAL--- 480 (625)
Q Consensus 405 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~-~~~kl~DfGla~~~~~~--- 480 (625)
+|.+++. .+++.++..++.|++.||+|||+++ |+||||||+|||++.+ +.+||+|||+|+.....
T Consensus 106 ~L~~~~~--------~l~~~~~~~~~~qll~al~ylH~~g---IiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~~ 174 (361)
T 4f9c_A 106 SFLDILN--------SLSFQEVREYMLNLFKALKRIHQFG---IVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIE 174 (361)
T ss_dssp CHHHHHT--------TCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEETTTTEEEECCCTTCEECTTCSCG
T ss_pred cHHHHHc--------CCCHHHHHHHHHHHHHHHHHHHHCC---eEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCcccc
Confidence 9999984 2889999999999999999999998 9999999999999877 79999999999754321
Q ss_pred ----------------------------ccccccCCCcCCccccCCC-CCCCccchhhhHHHHHHHHhCCCCCCCCC
Q 006922 481 ----------------------------APVIARAAGYRAPEVTDSR-KATQASDVYSFGVVLLEILTGKSPIHTTG 528 (625)
Q Consensus 481 ----------------------------~~~~~~~~~y~aPE~~~~~-~~~~~~DvwS~Gvil~elltG~~p~~~~~ 528 (625)
....+||+.|||||++.+. .|+.++||||+||++|||+||+.||....
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~ 251 (361)
T 4f9c_A 175 LLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKAS 251 (361)
T ss_dssp GGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCS
T ss_pred ccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCC
Confidence 1224689999999998765 58999999999999999999999997544
No 18
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=2e-43 Score=365.08 Aligned_cols=266 Identities=29% Similarity=0.519 Sum_probs=225.7
Q ss_pred hHcccCCceeEEEEEEcCCcEEEEEEeccccCC-hHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccCCChhh
Q 006922 330 EVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVG-KRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLGSVSA 408 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~-~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~ 408 (625)
+.||+|+||+||+|...+|+.||||++...... .+.+.+|++++.+++||||+++++++...+..++||||+++|+|.+
T Consensus 45 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~ 124 (321)
T 2qkw_B 45 FLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKR 124 (321)
T ss_dssp CCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEEECCTTCBTGG
T ss_pred ceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEEcCCCCcHHH
Confidence 569999999999999888999999998765433 4678999999999999999999999999999999999999999999
Q ss_pred hhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEeccccccccccc-----ccc
Q 006922 409 MLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSAL-----APV 483 (625)
Q Consensus 409 ~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~-----~~~ 483 (625)
++..... ....++|..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++..... ...
T Consensus 125 ~l~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 200 (321)
T 2qkw_B 125 HLYGSDL-PTMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLSTV 200 (321)
T ss_dssp GSSSSCC-CSCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCSTTEEECTTCCEEECCCTTCEECSSSSCCCCBCC
T ss_pred HHhccCC-CccccCHHHHHHHHHHHHHHHHHhcCCC---eecCCCCHHHEEECCCCCEEEeecccccccccccccccccc
Confidence 9976432 2335899999999999999999999998 999999999999999999999999999865322 123
Q ss_pred cccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccccccccccCCCCcH
Q 006922 484 IARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIE 563 (625)
Q Consensus 484 ~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 563 (625)
..|+..|+|||.+.+..++.++||||||+++|||+||+.||......+......|.............+++.... ....
T Consensus 201 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 279 (321)
T 2qkw_B 201 VKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLAD-KIRP 279 (321)
T ss_dssp CEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSSSCTT-CSCH
T ss_pred cCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcChhhcc-ccCH
Confidence 357888999999988889999999999999999999999998777666666777766555555555555554432 2346
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCC
Q 006922 564 EEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPN 600 (625)
Q Consensus 564 ~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~ 600 (625)
+...++.+++.+||+.||++|||+.|+++.|+.+...
T Consensus 280 ~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~ 316 (321)
T 2qkw_B 280 ESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRL 316 (321)
T ss_dssp HHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhc
Confidence 6778899999999999999999999999999987543
No 19
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=3.3e-44 Score=394.98 Aligned_cols=240 Identities=20% Similarity=0.254 Sum_probs=192.7
Q ss_pred hHcccCCceeEEEEEEc-CCcEEEEEEecccc----CChHHHHH---HHHHHHcCCCCceecceeEEEecCceEEEEEec
Q 006922 330 EVLGKGTFGMAYKAILE-DGTTVVVKRLKDVN----VGKRDFEQ---QMEIVGSIRHENVVELKAYYYSKDEKLMVYDYY 401 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~----~~~~~~~~---e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 401 (625)
++||+|+||+||+|+.. +|+.||||++++.. .......+ +++++..++|||||+++++|.+.+..|+|||||
T Consensus 195 k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~lylVmEy~ 274 (689)
T 3v5w_A 195 RIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLM 274 (689)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred EEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEEEEEecC
Confidence 57999999999999965 69999999997542 12222333 456777889999999999999999999999999
Q ss_pred cCCChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEeccccccccccc-
Q 006922 402 SLGSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSAL- 480 (625)
Q Consensus 402 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~- 480 (625)
+||+|.+++.... .+++..+..++.||+.||+|||+++ ||||||||+||||+.+|++||+|||+|+.....
T Consensus 275 ~GGdL~~~l~~~~-----~l~E~~a~~y~~qIl~aL~yLH~~g---IiHRDLKPeNILld~~G~vKL~DFGlA~~~~~~~ 346 (689)
T 3v5w_A 275 NGGDLHYHLSQHG-----VFSEADMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKK 346 (689)
T ss_dssp CSCBHHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECTTSCEEECCCTTCEECSSCC
T ss_pred CCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchHHeEEeCCCCEEecccceeeecCCCC
Confidence 9999999998653 3899999999999999999999998 999999999999999999999999999876543
Q ss_pred ccccccCCCcCCccccC-CCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccccccccccCC
Q 006922 481 APVIARAAGYRAPEVTD-SRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRY 559 (625)
Q Consensus 481 ~~~~~~~~~y~aPE~~~-~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 559 (625)
....+||+.|||||++. +..|+.++||||+||++|||++|+.||.+....+...+..... ... ..-.
T Consensus 347 ~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~---~~~---------~~~p 414 (689)
T 3v5w_A 347 PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL---TMA---------VELP 414 (689)
T ss_dssp CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHH---HCC---------CCCC
T ss_pred CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhc---CCC---------CCCC
Confidence 34568999999999996 4679999999999999999999999997654433333222111 110 0001
Q ss_pred CCcHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHH
Q 006922 560 PNIEEEMVEMLQIAMSCVVRMPDQRPK-----MPDVVR 592 (625)
Q Consensus 560 ~~~~~~~~~l~~l~~~Cl~~~P~~RPs-----~~ev~~ 592 (625)
... ..++.+++.+|++.||.+|++ ++||.+
T Consensus 415 ~~~---S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~ 449 (689)
T 3v5w_A 415 DSF---SPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 449 (689)
T ss_dssp TTS---CHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred ccC---CHHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence 112 235567777999999999998 577763
No 20
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=8.2e-44 Score=394.10 Aligned_cols=243 Identities=22% Similarity=0.398 Sum_probs=199.4
Q ss_pred HhHcccCCceeEEEEEEc-CCcEEEEEEeccccC-ChHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccCCCh
Q 006922 329 AEVLGKGTFGMAYKAILE-DGTTVVVKRLKDVNV-GKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLGSV 406 (625)
Q Consensus 329 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 406 (625)
.+.||+|+||+||+|... +|+.||+|+++.... ..+.+.+|+++|+.++|||||++++++.+.+..++|||||++|+|
T Consensus 162 ~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~~gg~L 241 (573)
T 3uto_A 162 HEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGEL 241 (573)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECCCCCBH
T ss_pred EEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeecCCCcH
Confidence 357999999999999964 699999999976533 346788999999999999999999999999999999999999999
Q ss_pred hhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCC--CCeeEecccccccccccc--c
Q 006922 407 SAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQ--QYGCVSDLGLTTITSALA--P 482 (625)
Q Consensus 407 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~--~~~kl~DfGla~~~~~~~--~ 482 (625)
.+++..... .+++..+..++.||+.||+|||+++ |+||||||+|||++.+ +.+||+|||+|+...... .
T Consensus 242 ~~~i~~~~~----~l~e~~~~~~~~qi~~al~ylH~~~---iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~~~ 314 (573)
T 3uto_A 242 FEKVADEHN----KMSEDEAVEYMRQVCKGLCHMHENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVK 314 (573)
T ss_dssp HHHHTCTTS----CEEHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSEEE
T ss_pred HHHHHHhCC----CCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCChhhccccCCCCCCEEEeeccceeEccCCCcee
Confidence 999865432 4899999999999999999999998 9999999999999865 899999999999875432 3
Q ss_pred ccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccccccccccCCCCc
Q 006922 483 VIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNI 562 (625)
Q Consensus 483 ~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 562 (625)
...||+.|||||++.+..|+.++||||+||++|||++|+.||.+....+....+. ..... ++.. ..+..
T Consensus 315 ~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~------~~~~~---~~~~--~~~~~ 383 (573)
T 3uto_A 315 VTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVK------SCDWN---MDDS--AFSGI 383 (573)
T ss_dssp EECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHH------TTCCC---CCSG--GGTTS
T ss_pred eeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHH------hCCCC---CCcc--cccCC
Confidence 4579999999999999999999999999999999999999998654433322221 11100 0000 01112
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006922 563 EEEMVEMLQIAMSCVVRMPDQRPKMPDVVR 592 (625)
Q Consensus 563 ~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 592 (625)
..++.+|+.+||+.||.+|||+.|+++
T Consensus 384 ---s~~~~dli~~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 384 ---SEDGKDFIRKLLLADPNTRMTIHQALE 410 (573)
T ss_dssp ---CHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred ---CHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 234567778999999999999999986
No 21
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=5.8e-43 Score=362.27 Aligned_cols=271 Identities=34% Similarity=0.645 Sum_probs=223.2
Q ss_pred HhHcccCCceeEEEEEEcCCcEEEEEEeccccC--ChHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccCCCh
Q 006922 329 AEVLGKGTFGMAYKAILEDGTTVVVKRLKDVNV--GKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLGSV 406 (625)
Q Consensus 329 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 406 (625)
.+.||+|+||+||+|...+|+.||||+++.... ....+.+|++++.+++||||+++++++...+..++||||+++|+|
T Consensus 35 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 114 (326)
T 3uim_A 35 KNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSV 114 (326)
T ss_dssp TTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEECCSSCCEEEEECCTTCBH
T ss_pred ceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEecCCceEEEEEeccCCCH
Confidence 357999999999999988899999999986532 234789999999999999999999999999999999999999999
Q ss_pred hhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEeccccccccccc----cc
Q 006922 407 SAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSAL----AP 482 (625)
Q Consensus 407 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~----~~ 482 (625)
.+++..... ...+++|..+..++.|++.||+|||+...++|+||||||+|||++.++.+||+|||+++..... ..
T Consensus 115 ~~~l~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 193 (326)
T 3uim_A 115 ASCLRERPE-SQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTT 193 (326)
T ss_dssp HHHHHCCST-TCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECCCSSCEECCSSSSCEEC
T ss_pred HHHHHhccc-cCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEeccCccccccCcccccccc
Confidence 999987543 3345999999999999999999999993333999999999999999999999999999876432 22
Q ss_pred ccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCC--CCcchhhHHHHHHHHhhcccccccccccccCCC
Q 006922 483 VIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTT--GGDELVHLVRWVHSVVREEWTAEVFDVELLRYP 560 (625)
Q Consensus 483 ~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 560 (625)
...||..|+|||.+.+..++.++|||||||++|||+||+.||... .........+|+...........+.+..... .
T Consensus 194 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 272 (326)
T 3uim_A 194 AVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQG-N 272 (326)
T ss_dssp CCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSCCSTTSSCTTCTT-S
T ss_pred cccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhchhhhhhcChhhcc-c
Confidence 345788999999998888999999999999999999999999631 1122334556666666665555565554432 3
Q ss_pred CcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCC
Q 006922 561 NIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPND 601 (625)
Q Consensus 561 ~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~ 601 (625)
...+...++.+++.+||+.||.+|||+.||++.|+......
T Consensus 273 ~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~~~~ 313 (326)
T 3uim_A 273 YKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGLAE 313 (326)
T ss_dssp CCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSSCSS
T ss_pred cCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcchhh
Confidence 45677889999999999999999999999999998755443
No 22
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=2.4e-43 Score=364.74 Aligned_cols=255 Identities=24% Similarity=0.319 Sum_probs=201.0
Q ss_pred hHcccCCceeEEEEEEcCCcEEEEEEeccccCChHHHHHHHHHHHcCCCCceecceeEEEecCc----eEEEEEeccCCC
Q 006922 330 EVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYYSKDE----KLMVYDYYSLGS 405 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~----~~lv~e~~~~g~ 405 (625)
+.||+|+||+||+|+.. ++.||||+++........+.+|+.++.+++||||+++++++..... .++||||+++|+
T Consensus 30 ~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e~~~~g~ 108 (322)
T 3soc_A 30 EVKARGRFGCVWKAQLL-NEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGS 108 (322)
T ss_dssp EEEECSTTCEEEEEEET-TEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCB
T ss_pred heecccCceEEEEEEEC-CCEEEEEEeecCchHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEEecCCCCC
Confidence 57999999999999875 8999999997655445567779999999999999999999987543 699999999999
Q ss_pred hhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhc----------CCCCceecCCCCCCEEeCCCCCeeEecccccc
Q 006922 406 VSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAA----------NGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTT 475 (625)
Q Consensus 406 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~----------~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~ 475 (625)
|.+++... .++|..+..++.|+++||+|||+. + |+||||||+|||++.++.+||+|||+++
T Consensus 109 L~~~l~~~------~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~---ivH~Dlkp~Nill~~~~~~kL~DFg~a~ 179 (322)
T 3soc_A 109 LSDFLKAN------VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPA---ISHRDIKSKNVLLKNNLTACIADFGLAL 179 (322)
T ss_dssp HHHHHHHC------CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECE---EECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred HHHHHHhc------CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCC---EEeCCCChHhEEECCCCeEEEccCCccc
Confidence 99999753 389999999999999999999998 6 9999999999999999999999999997
Q ss_pred cccccc-----cccccCCCcCCccccCC-----CCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHH---------
Q 006922 476 ITSALA-----PVIARAAGYRAPEVTDS-----RKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLV--------- 536 (625)
Q Consensus 476 ~~~~~~-----~~~~~~~~y~aPE~~~~-----~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~--------- 536 (625)
...... ....+|..|+|||++.+ ..++.++|||||||++|||+||+.||............
T Consensus 180 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~ 259 (322)
T 3soc_A 180 KFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSL 259 (322)
T ss_dssp EECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCH
T ss_pred ccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCch
Confidence 654321 22467889999999876 35567899999999999999999999765433211111
Q ss_pred -HHHHHHhhcccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCC
Q 006922 537 -RWVHSVVREEWTAEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRP 599 (625)
Q Consensus 537 -~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~ 599 (625)
.+........ .. +.............++.+++.+||+.||++|||+.|+++.|+++.+
T Consensus 260 ~~~~~~~~~~~-~~----~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 318 (322)
T 3soc_A 260 EDMQEVVVHKK-KR----PVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQR 318 (322)
T ss_dssp HHHHHHHTTSC-CC----CCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hhhhhhhhccc-CC----CCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 1111111110 00 1000000122345678899999999999999999999999998864
No 23
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=1.9e-42 Score=359.18 Aligned_cols=270 Identities=14% Similarity=0.124 Sum_probs=216.3
Q ss_pred hHcccCCceeEEEEEE-cCCcEEEEEEeccccCChHHHHHHHHHHHcC-CCCceecceeEEEecCceEEEEEeccCCChh
Q 006922 330 EVLGKGTFGMAYKAIL-EDGTTVVVKRLKDVNVGKRDFEQQMEIVGSI-RHENVVELKAYYYSKDEKLMVYDYYSLGSVS 407 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~ 407 (625)
+.||+|+||+||+|.. .+|+.||||++.... ..+.+.+|++++.++ +||||+++++++...+..++||||+ +++|.
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~L~ 92 (330)
T 2izr_A 15 KKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS-RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL-GPSLE 92 (330)
T ss_dssp EECCC-CTTSEEEEEETTTTEEEEEEEEETTC-SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC-CCBHH
T ss_pred EEeeccCCceEEEEEECCCCcEEEEEEecccc-chHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC-CCCHH
Confidence 5699999999999995 579999999987543 235689999999999 9999999999999999999999999 99999
Q ss_pred hhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCC-----eeEecccccccccccc-
Q 006922 408 AMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQY-----GCVSDLGLTTITSALA- 481 (625)
Q Consensus 408 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~-----~kl~DfGla~~~~~~~- 481 (625)
+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++. +||+|||+++......
T Consensus 93 ~~~~~~~----~~~~~~~~~~i~~qi~~~l~~LH~~~---iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~~ 165 (330)
T 2izr_A 93 DLFDLCD----RTFSLKTVLMIAIQLISRMEYVHSKN---LIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPET 165 (330)
T ss_dssp HHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTTT
T ss_pred HHHHHcC----CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecCCC
Confidence 9998642 24899999999999999999999998 999999999999999887 9999999998653321
Q ss_pred ---------cccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccccc
Q 006922 482 ---------PVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVF 552 (625)
Q Consensus 482 ---------~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 552 (625)
....||..|+|||++.+..++.++|||||||++|||++|+.||......+.......+..........
T Consensus 166 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~--- 242 (330)
T 2izr_A 166 KKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIE--- 242 (330)
T ss_dssp CCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHSCHH---
T ss_pred CccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccCCHH---
Confidence 24568899999999999999999999999999999999999998876555544444332211111000
Q ss_pred cccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCCCCCCCCCCCCCCCCCCCC
Q 006922 553 DVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPNDSENRPSSGNKSESSTPPP 619 (625)
Q Consensus 553 d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~~~~~~~~~~~~~~~~~~~ 619 (625)
.. .... . ++.+++..||+.+|.+||++++|.+.|+++............+|.....++|
T Consensus 243 --~~--~~~~---p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~~~~~~~~~dw~~~~~~~p 301 (330)
T 2izr_A 243 --VL--CENF---P-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRKGYMFDYEYDWIGKQLPTP 301 (330)
T ss_dssp --HH--TTTC---H-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTCCCSCCCTTTTSCCCCC
T ss_pred --HH--hccC---h-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHcCCCCCCCccCCCCCcCCC
Confidence 00 0011 1 6778888999999999999999999999887765555555666665443333
No 24
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1.1e-42 Score=349.92 Aligned_cols=247 Identities=21% Similarity=0.401 Sum_probs=206.8
Q ss_pred hHcccCCceeEEEEEEcCCcEEEEEEeccccCChHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccCCChhhh
Q 006922 330 EVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLGSVSAM 409 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~ 409 (625)
+.||+|+||+||+|...+++.||+|+++......+++.+|++++.+++||||+++++++.+.+..++||||+++++|.++
T Consensus 16 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~ 95 (269)
T 4hcu_A 16 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDY 95 (269)
T ss_dssp EEEEECSSCEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHH
T ss_pred heecCCCccEEEEEEecCCCeEEEEEecccccCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCCCCcHHHH
Confidence 56999999999999988899999999998777778899999999999999999999999999999999999999999999
Q ss_pred hccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEecccccccccccc----cccc
Q 006922 410 LHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALA----PVIA 485 (625)
Q Consensus 410 l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~----~~~~ 485 (625)
+..... .+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++...... ....
T Consensus 96 l~~~~~----~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~ 168 (269)
T 4hcu_A 96 LRTQRG----LFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTK 168 (269)
T ss_dssp HHTTTT----CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTSTT
T ss_pred HHhcCc----ccCHHHHHHHHHHHHHHHHHHHhCC---eecCCcchheEEEcCCCCEEeccccccccccccccccccCcc
Confidence 975432 4899999999999999999999998 9999999999999999999999999998764321 2234
Q ss_pred cCCCcCCccccCCCCCCCccchhhhHHHHHHHHh-CCCCCCCCCCcchhhHHHHHHHHhhcccccccccccccCCCCcHH
Q 006922 486 RAAGYRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIEE 564 (625)
Q Consensus 486 ~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 564 (625)
++..|+|||.+.+..++.++||||+|+++|||++ |+.||......+....+ . ... .. .....
T Consensus 169 ~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~---~---~~~---~~--------~~~~~ 231 (269)
T 4hcu_A 169 FPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI---S---TGF---RL--------YKPRL 231 (269)
T ss_dssp CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHH---H---TTC---CC--------CCCTT
T ss_pred cccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHH---h---cCc---cC--------CCCCc
Confidence 5567999999988899999999999999999999 99999765433222111 1 110 00 00111
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCC
Q 006922 565 EMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPN 600 (625)
Q Consensus 565 ~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~ 600 (625)
...++.+++.+||+.+|++||++.|+++.|+++.+.
T Consensus 232 ~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~ 267 (269)
T 4hcu_A 232 ASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267 (269)
T ss_dssp SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence 234577888899999999999999999999998654
No 25
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=1.3e-42 Score=356.95 Aligned_cols=253 Identities=27% Similarity=0.408 Sum_probs=197.7
Q ss_pred HhHcccCCceeEEEEEEcCCcEEEEEEeccccCCh---HHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccCCC
Q 006922 329 AEVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGK---RDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLGS 405 (625)
Q Consensus 329 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~---~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 405 (625)
.+.||+|+||+||+|.. +|+.||||++....... +.+.+|++++.+++||||+++++++...+..++||||+++|+
T Consensus 42 ~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~ 120 (309)
T 3p86_A 42 KEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGS 120 (309)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEEECCTTCB
T ss_pred eeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEEecCCCCc
Confidence 35799999999999987 58999999998654433 468899999999999999999999999999999999999999
Q ss_pred hhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEeccccccccccc---cc
Q 006922 406 VSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSAL---AP 482 (625)
Q Consensus 406 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~---~~ 482 (625)
|.+++.... ....+++..+..++.|++.||+|||+.+ ++|+||||||+|||++.++.+||+|||+++..... ..
T Consensus 121 L~~~l~~~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~~-~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~ 197 (309)
T 3p86_A 121 LYRLLHKSG--AREQLDERRRLSMAYDVAKGMNYLHNRN-PPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSK 197 (309)
T ss_dssp HHHHHHSTT--HHHHSCHHHHHHHHHHHHHHHHHHHTSS-SCCCCTTCCGGGEEECTTCCEEECCCC-------------
T ss_pred HHHHHhhcC--CCCCCCHHHHHHHHHHHHHHHHHHHcCC-CCEECCCCChhhEEEeCCCcEEECCCCCCccccccccccc
Confidence 999997542 1224899999999999999999999874 34999999999999999999999999999865432 23
Q ss_pred ccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccccccccccCCCCc
Q 006922 483 VIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNI 562 (625)
Q Consensus 483 ~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 562 (625)
...||..|+|||++.+..++.++|||||||++|||++|+.||......+....+ .. ... ..+..
T Consensus 198 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~---~~---~~~----------~~~~~ 261 (309)
T 3p86_A 198 SAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAV---GF---KCK----------RLEIP 261 (309)
T ss_dssp ----CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHH---HH---SCC----------CCCCC
T ss_pred cCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH---Hh---cCC----------CCCCC
Confidence 356888999999999999999999999999999999999999765433222111 10 000 00111
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCC
Q 006922 563 EEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPND 601 (625)
Q Consensus 563 ~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~ 601 (625)
.....++.+++.+||+.+|.+|||+.|+++.|+.+....
T Consensus 262 ~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~ 300 (309)
T 3p86_A 262 RNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSA 300 (309)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC--
T ss_pred ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhC
Confidence 122345778888999999999999999999999987754
No 26
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=2.7e-42 Score=363.66 Aligned_cols=251 Identities=25% Similarity=0.390 Sum_probs=203.7
Q ss_pred HhHcccCCceeEEEEEE--------cCCcEEEEEEeccccCC--hHHHHHHHHHHHcC-CCCceecceeEEEecCceEEE
Q 006922 329 AEVLGKGTFGMAYKAIL--------EDGTTVVVKRLKDVNVG--KRDFEQQMEIVGSI-RHENVVELKAYYYSKDEKLMV 397 (625)
Q Consensus 329 ~~~lg~G~~g~Vy~~~~--------~~g~~vavK~l~~~~~~--~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv 397 (625)
.+.||+|+||+||+|.. .++..||||+++..... .+.+.+|++++.++ +||||++++++|...+..++|
T Consensus 86 ~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~lv 165 (370)
T 2psq_A 86 GKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVI 165 (370)
T ss_dssp EEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSSSCEEE
T ss_pred eeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCCCEEEE
Confidence 35799999999999985 23567999999865322 35689999999999 899999999999999999999
Q ss_pred EEeccCCChhhhhccccCC-----------CCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCe
Q 006922 398 YDYYSLGSVSAMLHSERGE-----------GRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYG 466 (625)
Q Consensus 398 ~e~~~~g~L~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ 466 (625)
|||+++|+|.+++...... ....+++..+..++.|+++||+|||+++ |+||||||+|||++.++.+
T Consensus 166 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~ 242 (370)
T 2psq_A 166 VEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDLAARNVLVTENNVM 242 (370)
T ss_dssp EECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCE
T ss_pred EEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---eeccccchhhEEECCCCCE
Confidence 9999999999999865421 1224899999999999999999999998 9999999999999999999
Q ss_pred eEecccccccccccc-----cccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHh-CCCCCCCCCCcchhhHHHHHH
Q 006922 467 CVSDLGLTTITSALA-----PVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVH 540 (625)
Q Consensus 467 kl~DfGla~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~ 540 (625)
||+|||+++...... ....++..|+|||++.+..++.++|||||||++|||+| |+.||......+....+.
T Consensus 243 kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~~~~~~--- 319 (370)
T 2psq_A 243 KIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLK--- 319 (370)
T ss_dssp EECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHH---
T ss_pred EEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh---
Confidence 999999998654321 22345667999999999999999999999999999999 999998765444332211
Q ss_pred HHhhcccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCC
Q 006922 541 SVVREEWTAEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRP 599 (625)
Q Consensus 541 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~ 599 (625)
.... .+.......++.+++.+||+.+|.+||++.|+++.|+.+..
T Consensus 320 ----~~~~----------~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~ 364 (370)
T 2psq_A 320 ----EGHR----------MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 364 (370)
T ss_dssp ----TTCC----------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ----cCCC----------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 1100 01111223467788889999999999999999999998754
No 27
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=1.2e-42 Score=359.97 Aligned_cols=251 Identities=24% Similarity=0.406 Sum_probs=202.4
Q ss_pred HhHcccCCceeEEEEEEc----CCcEEEEEEeccccC--ChHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEecc
Q 006922 329 AEVLGKGTFGMAYKAILE----DGTTVVVKRLKDVNV--GKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYS 402 (625)
Q Consensus 329 ~~~lg~G~~g~Vy~~~~~----~g~~vavK~l~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 402 (625)
.+.||+|+||+||+|... .+..||||+++.... ..+.+.+|++++.+++||||+++++++.+.+..++||||++
T Consensus 54 ~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 133 (325)
T 3kul_A 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYME 133 (325)
T ss_dssp EEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEEEECCT
T ss_pred eeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEEeeCCC
Confidence 367999999999999964 355699999986432 23678999999999999999999999999999999999999
Q ss_pred CCChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEeccccccccccccc
Q 006922 403 LGSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAP 482 (625)
Q Consensus 403 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~ 482 (625)
+|+|.+++..... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.......
T Consensus 134 ~~~L~~~l~~~~~----~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 206 (325)
T 3kul_A 134 NGSLDTFLRTHDG----QFTIMQLVGMLRGVGAGMRYLSDLG---YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPD 206 (325)
T ss_dssp TCBHHHHHHTTTT----CSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCSSCEECC----
T ss_pred CCcHHHHHHhccc----CCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCcceEEECCCCCEEECCCCcccccccCcc
Confidence 9999999975432 4899999999999999999999998 99999999999999999999999999987643211
Q ss_pred ------ccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHh-CCCCCCCCCCcchhhHHHHHHHHhhccccccccccc
Q 006922 483 ------VIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVE 555 (625)
Q Consensus 483 ------~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 555 (625)
...++..|+|||++.+..++.++|||||||++|||++ |+.||......+....+. ...
T Consensus 207 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~-------~~~-------- 271 (325)
T 3kul_A 207 AAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVE-------EGY-------- 271 (325)
T ss_dssp CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHH-------TTC--------
T ss_pred ceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHH-------cCC--------
Confidence 1234557999999988889999999999999999999 999997654333222111 110
Q ss_pred ccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCCCC
Q 006922 556 LLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPNDSE 603 (625)
Q Consensus 556 ~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~~~ 603 (625)
..+........+.+++..||..||.+|||+.||++.|+.+......
T Consensus 272 --~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~~ 317 (325)
T 3kul_A 272 --RLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPES 317 (325)
T ss_dssp --CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC-
T ss_pred --CCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCccc
Confidence 0111122334677888899999999999999999999999765443
No 28
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=2.9e-42 Score=354.54 Aligned_cols=246 Identities=24% Similarity=0.422 Sum_probs=202.6
Q ss_pred hHcccCCceeEEEEEEc-CCcEEEEEEecccc-CChHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccCCChh
Q 006922 330 EVLGKGTFGMAYKAILE-DGTTVVVKRLKDVN-VGKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLGSVS 407 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~ 407 (625)
+.||+|+||+||+|... +++.||+|++.... ...+.+.+|++++.+++||||+++++++.+.+..++||||+++|+|.
T Consensus 16 ~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 95 (310)
T 3s95_A 16 EVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLR 95 (310)
T ss_dssp EEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCTTCBHH
T ss_pred ceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEecCCCcHH
Confidence 57999999999999964 68999999986543 23467899999999999999999999999999999999999999999
Q ss_pred hhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEeccccccccccccc-----
Q 006922 408 AMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAP----- 482 (625)
Q Consensus 408 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~----- 482 (625)
+++..... .++|..+..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++.......
T Consensus 96 ~~l~~~~~----~~~~~~~~~i~~qi~~al~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 168 (310)
T 3s95_A 96 GIIKSMDS----QYPWSQRVSFAKDIASGMAYLHSMN---IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGL 168 (310)
T ss_dssp HHHHHCCT----TSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEECTTSCEEECCCTTCEECC---------
T ss_pred HHHHhccC----CCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCcCeEEECCCCCEEEeecccceeccccccccccc
Confidence 99986432 4899999999999999999999998 99999999999999999999999999986543211
Q ss_pred ------------ccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchh---hHHHHHHHHhhccc
Q 006922 483 ------------VIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELV---HLVRWVHSVVREEW 547 (625)
Q Consensus 483 ------------~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~---~~~~~~~~~~~~~~ 547 (625)
...||..|+|||++.+..++.++||||||+++|||++|..||......... .........
T Consensus 169 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~----- 243 (310)
T 3s95_A 169 RSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRY----- 243 (310)
T ss_dssp -----------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHHHT-----
T ss_pred ccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhcccccc-----
Confidence 346888899999999999999999999999999999999998754332211 111111100
Q ss_pred ccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCC
Q 006922 548 TAEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPN 600 (625)
Q Consensus 548 ~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~ 600 (625)
. .......+.+++.+||+.||++|||+.|+++.|+.++..
T Consensus 244 --------~-----~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~ 283 (310)
T 3s95_A 244 --------C-----PPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMH 283 (310)
T ss_dssp --------C-----CTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred --------C-----CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 0 011123567788899999999999999999999998754
No 29
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=4.3e-42 Score=371.57 Aligned_cols=247 Identities=23% Similarity=0.382 Sum_probs=204.4
Q ss_pred HhHcccCCceeEEEEEEcCCcEEEEEEeccccCChHHHHHHHHHHHcCCCCceecceeEEEecC-ceEEEEEeccCCChh
Q 006922 329 AEVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYYSKD-EKLMVYDYYSLGSVS 407 (625)
Q Consensus 329 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-~~~lv~e~~~~g~L~ 407 (625)
.+.||+|+||+||+|... |+.||||+++... ..+.+.+|++++.+++||||+++++++...+ ..++||||+++|+|.
T Consensus 198 ~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~~~g~L~ 275 (450)
T 1k9a_A 198 LQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLV 275 (450)
T ss_dssp EEEEEECSSEEEEEEEET-TEEEEEEEESSCT-TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECCTTCBHH
T ss_pred EeeecCcCCeeEEEEEec-CCeEEEEEeCCch-HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEecCCCcHH
Confidence 357999999999999875 7899999998654 4578999999999999999999999988765 789999999999999
Q ss_pred hhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEecccccccccccccccccC
Q 006922 408 AMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARA 487 (625)
Q Consensus 408 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~ 487 (625)
+++..... ..+++..+..++.|+++||+|||+++ |+||||||+|||++.++.+||+|||+++..........++
T Consensus 276 ~~l~~~~~---~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~ 349 (450)
T 1k9a_A 276 DYLRSRGR---SVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLP 349 (450)
T ss_dssp HHHHHHCT---TTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTSCEEECCCTTCEECC------CCC
T ss_pred HHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHhhEEECCCCCEEEeeCCCcccccccccCCCCC
Confidence 99986532 24789999999999999999999998 9999999999999999999999999998765444344567
Q ss_pred CCcCCccccCCCCCCCccchhhhHHHHHHHHh-CCCCCCCCCCcchhhHHHHHHHHhhcccccccccccccCCCCcHHHH
Q 006922 488 AGYRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIEEEM 566 (625)
Q Consensus 488 ~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 566 (625)
..|+|||.+.+..++.++|||||||++|||+| |+.||......+....+. .+. ..+......
T Consensus 350 ~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~-------~~~----------~~~~p~~~~ 412 (450)
T 1k9a_A 350 VKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVE-------KGY----------KMDAPDGCP 412 (450)
T ss_dssp TTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHHH-------TTC----------CCCCCTTCC
T ss_pred cceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-------cCC----------CCCCCCcCC
Confidence 78999999999999999999999999999999 999998766554432221 110 011112233
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCC
Q 006922 567 VEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPN 600 (625)
Q Consensus 567 ~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~ 600 (625)
.++.+++.+||..||.+|||+.|+++.|+.+...
T Consensus 413 ~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~ 446 (450)
T 1k9a_A 413 PAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTH 446 (450)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHh
Confidence 4677888899999999999999999999988654
No 30
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=3.9e-42 Score=345.69 Aligned_cols=248 Identities=23% Similarity=0.364 Sum_probs=206.0
Q ss_pred hHcccCCceeEEEEEEcCCcEEEEEEeccccCChHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccCCChhhh
Q 006922 330 EVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLGSVSAM 409 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~ 409 (625)
+.||+|+||+||+|...++..||+|+++......+++.+|++++.+++||||+++++++...+..++||||+++++|.++
T Consensus 14 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~ 93 (268)
T 3sxs_A 14 KELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNY 93 (268)
T ss_dssp EEEEEETTEEEEEEEETTTEEEEEEEECBTTBCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHH
T ss_pred eeeccCCCceEEEEEecCceeEEEEEeccCCCcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEccCCCcHHHH
Confidence 56999999999999988888999999988777778899999999999999999999999999999999999999999999
Q ss_pred hccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEeccccccccccccc----ccc
Q 006922 410 LHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAP----VIA 485 (625)
Q Consensus 410 l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~----~~~ 485 (625)
+.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++....... ...
T Consensus 94 l~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~ 166 (268)
T 3sxs_A 94 LRSHG----KGLEPSQLLEMCYDVCEGMAFLESHQ---FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTK 166 (268)
T ss_dssp HHHHG----GGCCHHHHHHHHHHHHHHHHHHHHTT---EEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEECCSCC
T ss_pred HHHcC----CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCcCcceEEECCCCCEEEccCccceecchhhhhcccCCC
Confidence 97643 24899999999999999999999998 99999999999999999999999999986643321 223
Q ss_pred cCCCcCCccccCCCCCCCccchhhhHHHHHHHHh-CCCCCCCCCCcchhhHHHHHHHHhhcccccccccccccCCCCcHH
Q 006922 486 RAAGYRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIEE 564 (625)
Q Consensus 486 ~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 564 (625)
++..|+|||.+.+..++.++||||||+++|||+| |+.||......+....+ .... .... ...
T Consensus 167 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~------~~~~---~~~~--------~~~ 229 (268)
T 3sxs_A 167 FPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKV------SQGH---RLYR--------PHL 229 (268)
T ss_dssp CCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHH------HTTC---CCCC--------CTT
T ss_pred cCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHH------HcCC---CCCC--------CCc
Confidence 4556999999988889999999999999999999 99999765433222111 1110 0000 111
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCC
Q 006922 565 EMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPND 601 (625)
Q Consensus 565 ~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~ 601 (625)
....+.+++..||+.+|++|||+.|+++.|+.+++..
T Consensus 230 ~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~~ 266 (268)
T 3sxs_A 230 ASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREKD 266 (268)
T ss_dssp SCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC--
T ss_pred ChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhcc
Confidence 1235777888999999999999999999999998764
No 31
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=2.3e-42 Score=374.23 Aligned_cols=247 Identities=25% Similarity=0.428 Sum_probs=206.0
Q ss_pred hHcccCCceeEEEEEEcCCcEEEEEEeccccCChHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccCCChhhh
Q 006922 330 EVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLGSVSAM 409 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~ 409 (625)
+.||+|+||+||+|...++..||||+++......+.+.+|++++.+++||||+++++++. .+..++||||+++|+|.++
T Consensus 194 ~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~~~g~L~~~ 272 (454)
T 1qcf_A 194 KKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFMAKGSLLDF 272 (454)
T ss_dssp EEEECCSSEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCCTTCBHHHH
T ss_pred EEcccCCceEEEEEEECCccEEEEEEecCCCccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeecCCCcHHHH
Confidence 579999999999999988899999999877667788999999999999999999999986 5678999999999999999
Q ss_pred hccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEecccccccccccc----cccc
Q 006922 410 LHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALA----PVIA 485 (625)
Q Consensus 410 l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~----~~~~ 485 (625)
+..... ..+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++...... ....
T Consensus 273 l~~~~~---~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~~ 346 (454)
T 1qcf_A 273 LKSDEG---SKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAK 346 (454)
T ss_dssp HHSHHH---HTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHHTTCSSS
T ss_pred HHhccC---CCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCceeccCCCc
Confidence 975431 23789999999999999999999998 9999999999999999999999999998764321 1223
Q ss_pred cCCCcCCccccCCCCCCCccchhhhHHHHHHHHh-CCCCCCCCCCcchhhHHHHHHHHhhcccccccccccccCCCCcHH
Q 006922 486 RAAGYRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIEE 564 (625)
Q Consensus 486 ~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 564 (625)
++..|+|||++....++.++|||||||++|||+| |+.||.+....+.... +.. .. ..+....
T Consensus 347 ~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~---i~~---~~-----------~~~~~~~ 409 (454)
T 1qcf_A 347 FPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRA---LER---GY-----------RMPRPEN 409 (454)
T ss_dssp SCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHH---HHH---TC-----------CCCCCTT
T ss_pred ccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHH---HHc---CC-----------CCCCCCC
Confidence 4567999999988899999999999999999999 9999976543332221 111 10 0111222
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCC
Q 006922 565 EMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPN 600 (625)
Q Consensus 565 ~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~ 600 (625)
...++.+++.+||..||++|||+.+|++.|+.+...
T Consensus 410 ~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~ 445 (454)
T 1qcf_A 410 CPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTA 445 (454)
T ss_dssp SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSS
T ss_pred CCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhc
Confidence 334678888999999999999999999999998654
No 32
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=6.1e-42 Score=350.02 Aligned_cols=239 Identities=19% Similarity=0.319 Sum_probs=197.9
Q ss_pred hHcccCCceeEEEEEE-cCCcEEEEEEecccc-CChHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccCCChh
Q 006922 330 EVLGKGTFGMAYKAIL-EDGTTVVVKRLKDVN-VGKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLGSVS 407 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~ 407 (625)
+.||+|+||+||+|.. .+|+.||||++.... ...+.+.+|+.++.+++||||+++++++...+..++||||+++|+|.
T Consensus 26 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 105 (297)
T 3fxz_A 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT 105 (297)
T ss_dssp EEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBHH
T ss_pred eeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEECCCCCCHH
Confidence 5699999999999994 579999999997543 34567899999999999999999999999999999999999999999
Q ss_pred hhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEeccccccccccc---cccc
Q 006922 408 AMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSAL---APVI 484 (625)
Q Consensus 408 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~---~~~~ 484 (625)
+++... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++...... ....
T Consensus 106 ~~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 176 (297)
T 3fxz_A 106 DVVTET------CMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTM 176 (297)
T ss_dssp HHHHHS------CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBCCC
T ss_pred HHHhhc------CCCHHHHHHHHHHHHHHHHHHHhCC---ceeCCCCHHHEEECCCCCEEEeeCCCceecCCcccccCCc
Confidence 999754 3899999999999999999999998 999999999999999999999999998876432 2334
Q ss_pred ccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccccccccccCCCCcHH
Q 006922 485 ARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIEE 564 (625)
Q Consensus 485 ~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 564 (625)
.||..|+|||++.+..++.++|||||||++|||++|+.||......+....+ ..... .. ......
T Consensus 177 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~------~~~~~-~~--------~~~~~~ 241 (297)
T 3fxz_A 177 VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLI------ATNGT-PE--------LQNPEK 241 (297)
T ss_dssp CSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH------HHHCS-CC--------CSCGGG
T ss_pred cCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH------HhCCC-CC--------CCCccc
Confidence 6888999999999999999999999999999999999999764332211111 11110 00 111122
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006922 565 EMVEMLQIAMSCVVRMPDQRPKMPDVVR 592 (625)
Q Consensus 565 ~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 592 (625)
....+.+++.+||+.||++|||+.|+++
T Consensus 242 ~~~~~~~li~~~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 242 LSAIFRDFLNRCLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp SCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred cCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 2345778888999999999999999986
No 33
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=1.1e-42 Score=366.97 Aligned_cols=247 Identities=26% Similarity=0.444 Sum_probs=193.1
Q ss_pred hHcccCCceeEEEEEEc----CCcEEEEEEeccccC--ChHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccC
Q 006922 330 EVLGKGTFGMAYKAILE----DGTTVVVKRLKDVNV--GKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSL 403 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~----~g~~vavK~l~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 403 (625)
+.||+|+||+||+|+.. ++..||||+++.... ..+.+.+|++++.+++||||+++++++...+..++||||+++
T Consensus 51 ~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 130 (373)
T 2qol_A 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMEN 130 (373)
T ss_dssp EEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTT
T ss_pred eEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEEEeCCCC
Confidence 57999999999999854 577899999976432 235789999999999999999999999999999999999999
Q ss_pred CChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEeccccccccccccc-
Q 006922 404 GSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAP- 482 (625)
Q Consensus 404 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~- 482 (625)
|+|.++++... ..+++.++..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++.......
T Consensus 131 ~sL~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 203 (373)
T 2qol_A 131 GSLDSFLRKHD----AQFTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEA 203 (373)
T ss_dssp CBHHHHHHTTT----TCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCC------------
T ss_pred CcHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCcceEEEcCCCCEEECcCccccccccCCcc
Confidence 99999997543 24899999999999999999999998 99999999999999999999999999987643221
Q ss_pred -----ccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHh-CCCCCCCCCCcchhhHHHHHHHHhhcccccccccccc
Q 006922 483 -----VIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVEL 556 (625)
Q Consensus 483 -----~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 556 (625)
...++..|+|||++.+..++.++|||||||++|||++ |+.||......+....+ . ...
T Consensus 204 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i---~----~~~--------- 267 (373)
T 2qol_A 204 AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV---D----EGY--------- 267 (373)
T ss_dssp ----------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHH---H----TTE---------
T ss_pred ceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH---H----cCC---------
Confidence 1123567999999998899999999999999999998 99999765433222111 1 110
Q ss_pred cCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCC
Q 006922 557 LRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPN 600 (625)
Q Consensus 557 ~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~ 600 (625)
..+........+.+++.+||+.+|.+||++.||++.|+.+...
T Consensus 268 -~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~ 310 (373)
T 2qol_A 268 -RLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310 (373)
T ss_dssp -ECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred -CCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhC
Confidence 0111122334678888999999999999999999999988654
No 34
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=1.4e-42 Score=366.86 Aligned_cols=247 Identities=23% Similarity=0.369 Sum_probs=202.4
Q ss_pred HhHcccCCceeEEEEEEc-CCcEEEEEEeccccCC--hHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccCCC
Q 006922 329 AEVLGKGTFGMAYKAILE-DGTTVVVKRLKDVNVG--KRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLGS 405 (625)
Q Consensus 329 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~--~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 405 (625)
.+.||+|+||+||+|... +++.||||+++..... .+.+.+|++++.+++||||+++++++...+..++||||+++|+
T Consensus 119 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g~ 198 (377)
T 3cbl_A 119 GEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGD 198 (377)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTCB
T ss_pred eeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEEcCCCCC
Confidence 367999999999999975 7899999999864321 2468899999999999999999999999999999999999999
Q ss_pred hhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEecccccccccccccc--
Q 006922 406 VSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPV-- 483 (625)
Q Consensus 406 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~-- 483 (625)
|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++........
T Consensus 199 L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~~~ 271 (377)
T 3cbl_A 199 FLTFLRTEG----ARLRVKTLLQMVGDAAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAAS 271 (377)
T ss_dssp HHHHHHHHG----GGCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEECC
T ss_pred HHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCC---cCCcccCHHHEEEcCCCcEEECcCCCceecCCCceeec
Confidence 999997643 24899999999999999999999998 999999999999999999999999999865432211
Q ss_pred ---cccCCCcCCccccCCCCCCCccchhhhHHHHHHHHh-CCCCCCCCCCcchhhHHHHHHHHhhcccccccccccccCC
Q 006922 484 ---IARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRY 559 (625)
Q Consensus 484 ---~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 559 (625)
..++..|+|||.+.+..++.++|||||||++|||+| |+.||......+....+. .+. ..
T Consensus 272 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~~-------~~~----------~~ 334 (377)
T 3cbl_A 272 GGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVE-------KGG----------RL 334 (377)
T ss_dssp SSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHHH-------TTC----------CC
T ss_pred CCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-------cCC----------CC
Confidence 123556999999988889999999999999999999 999997654333222111 110 01
Q ss_pred CCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCC
Q 006922 560 PNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRP 599 (625)
Q Consensus 560 ~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~ 599 (625)
+.......++.+++.+||+.||++|||+.|+++.|+.++.
T Consensus 335 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~ 374 (377)
T 3cbl_A 335 PCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRK 374 (377)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHh
Confidence 1112223467788899999999999999999999998854
No 35
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=2.6e-41 Score=349.23 Aligned_cols=238 Identities=19% Similarity=0.316 Sum_probs=197.1
Q ss_pred HcccCCceeEEEEEEc-CCcEEEEEEeccccC-ChHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccCCChhh
Q 006922 331 VLGKGTFGMAYKAILE-DGTTVVVKRLKDVNV-GKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLGSVSA 408 (625)
Q Consensus 331 ~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~ 408 (625)
.||+|+||+||+|... +|+.||||++..... ..+.+.+|+.++.+++||||+++++++...+..++||||+++++|.+
T Consensus 52 ~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~ 131 (321)
T 2c30_A 52 KIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTD 131 (321)
T ss_dssp EEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECCCCSCBHHH
T ss_pred EeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEecCCCCCHHH
Confidence 6999999999999965 799999999976543 34678999999999999999999999999999999999999999999
Q ss_pred hhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEeccccccccccc---ccccc
Q 006922 409 MLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSAL---APVIA 485 (625)
Q Consensus 409 ~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~---~~~~~ 485 (625)
++... .+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++..... .....
T Consensus 132 ~l~~~------~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 202 (321)
T 2c30_A 132 IVSQV------RLNEEQIATVCEAVLQALAYLHAQG---VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLV 202 (321)
T ss_dssp HHTTC------CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCCCC
T ss_pred HHHhc------CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCcEEEeeeeeeeecccCcccccccc
Confidence 98643 3899999999999999999999998 999999999999999999999999999876432 23456
Q ss_pred cCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccccccccccCCCCcHHH
Q 006922 486 RAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIEEE 565 (625)
Q Consensus 486 ~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 565 (625)
||..|+|||++.+..++.++|||||||++|||++|+.||......+ ....+.. ...... ......
T Consensus 203 gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~---~~~~~~~----~~~~~~--------~~~~~~ 267 (321)
T 2c30_A 203 GTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQ---AMKRLRD----SPPPKL--------KNSHKV 267 (321)
T ss_dssp SCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH---HHHHHHH----SSCCCC--------TTGGGS
T ss_pred CCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHhc----CCCCCc--------CccccC
Confidence 8889999999999999999999999999999999999997643222 2221111 110000 111112
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006922 566 MVEMLQIAMSCVVRMPDQRPKMPDVVR 592 (625)
Q Consensus 566 ~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 592 (625)
...+.+++.+||+.||++|||+.|+++
T Consensus 268 ~~~l~~li~~~l~~dp~~Rps~~ell~ 294 (321)
T 2c30_A 268 SPVLRDFLERMLVRDPQERATAQELLD 294 (321)
T ss_dssp CHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 235677888999999999999999986
No 36
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=8.3e-42 Score=353.73 Aligned_cols=237 Identities=21% Similarity=0.324 Sum_probs=196.6
Q ss_pred hHcccCCceeEEEEEE-cCCcEEEEEEeccccCC---hHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccCCC
Q 006922 330 EVLGKGTFGMAYKAIL-EDGTTVVVKRLKDVNVG---KRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLGS 405 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 405 (625)
+.||+|+||+||+|.. .+|+.||||++...... .+.+.+|++++..++||||+++++++...+..++||||+++|+
T Consensus 21 ~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~~~ 100 (328)
T 3fe3_A 21 KTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGE 100 (328)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTCB
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEECCCCCc
Confidence 5799999999999996 57999999999765433 2467899999999999999999999999999999999999999
Q ss_pred hhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEeccccccccccc--ccc
Q 006922 406 VSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSAL--APV 483 (625)
Q Consensus 406 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~--~~~ 483 (625)
|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++..... ...
T Consensus 101 L~~~l~~~~-----~l~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~ 172 (328)
T 3fe3_A 101 VFDYLVAHG-----RMKEKEARSKFRQIVSAVQYCHQKR---IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDA 172 (328)
T ss_dssp HHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSCGGGT
T ss_pred HHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---EeccCCCHHHEEEcCCCCEEEeeccCceecCCCCcccc
Confidence 999997653 3899999999999999999999998 999999999999999999999999999865432 334
Q ss_pred cccCCCcCCccccCCCCCC-CccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccccccccccCCCCc
Q 006922 484 IARAAGYRAPEVTDSRKAT-QASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNI 562 (625)
Q Consensus 484 ~~~~~~y~aPE~~~~~~~~-~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 562 (625)
..||+.|+|||++.+..++ .++||||+||++|||++|+.||.+....+....+ ..... ..+
T Consensus 173 ~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i------~~~~~----------~~p-- 234 (328)
T 3fe3_A 173 FCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERV------LRGKY----------RIP-- 234 (328)
T ss_dssp TSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH------HHCCC----------CCC--
T ss_pred ccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHH------HhCCC----------CCC--
Confidence 5788999999999887775 7999999999999999999999765433222111 11110 011
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006922 563 EEEMVEMLQIAMSCVVRMPDQRPKMPDVVR 592 (625)
Q Consensus 563 ~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 592 (625)
.....++.+++.+|+..||.+|||++|+++
T Consensus 235 ~~~s~~~~~li~~~L~~dP~~R~t~~eil~ 264 (328)
T 3fe3_A 235 FYMSTDCENLLKRFLVLNPIKRGTLEQIMK 264 (328)
T ss_dssp TTSCHHHHHHHHHHCCSSTTTSCCHHHHTT
T ss_pred CCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 112235667888999999999999999976
No 37
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=6.3e-42 Score=347.08 Aligned_cols=247 Identities=20% Similarity=0.316 Sum_probs=203.6
Q ss_pred hHcccCCceeEEEEEEcCCcEEEEEEeccccCChHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccCCChhhh
Q 006922 330 EVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLGSVSAM 409 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~ 409 (625)
+.||+|+||+||++...++..||+|+++......+++.+|++++.+++||||+++++++.+.+..++||||+++++|.++
T Consensus 30 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~ 109 (283)
T 3gen_A 30 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNY 109 (283)
T ss_dssp EECC---CEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCCTTCBHHHH
T ss_pred hhcCCCCCceEEEEEEcCCCeEEEEEecCCCCCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEeccCCCcHHHH
Confidence 57999999999999998888999999998777778899999999999999999999999999999999999999999999
Q ss_pred hccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEecccccccccccc----cccc
Q 006922 410 LHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALA----PVIA 485 (625)
Q Consensus 410 l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~----~~~~ 485 (625)
+..... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++...... ....
T Consensus 110 l~~~~~----~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~ 182 (283)
T 3gen_A 110 LREMRH----RFQTQQLLEMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSK 182 (283)
T ss_dssp HHCGGG----CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHSTTSTT
T ss_pred HHHhcc----CCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCccceEEEcCCCCEEEccccccccccccccccccCCc
Confidence 976432 3899999999999999999999998 9999999999999999999999999998764321 1223
Q ss_pred cCCCcCCccccCCCCCCCccchhhhHHHHHHHHh-CCCCCCCCCCcchhhHHHHHHHHhhcccccccccccccCCCCcHH
Q 006922 486 RAAGYRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIEE 564 (625)
Q Consensus 486 ~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 564 (625)
++..|+|||.+.+..++.++||||+|+++|||+| |+.||......+....+. ... .. .....
T Consensus 183 ~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~------~~~---~~--------~~~~~ 245 (283)
T 3gen_A 183 FPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIA------QGL---RL--------YRPHL 245 (283)
T ss_dssp SCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHH------TTC---CC--------CCCTT
T ss_pred cCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHHh------ccc---CC--------CCCCc
Confidence 4567999999988889999999999999999999 999997654332222111 110 00 00111
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCC
Q 006922 565 EMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPN 600 (625)
Q Consensus 565 ~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~ 600 (625)
....+.+++.+||+.+|.+|||+.|+++.|+++..+
T Consensus 246 ~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~ 281 (283)
T 3gen_A 246 ASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDE 281 (283)
T ss_dssp CCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhc
Confidence 123577888899999999999999999999988654
No 38
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=5.6e-42 Score=374.98 Aligned_cols=249 Identities=21% Similarity=0.359 Sum_probs=208.1
Q ss_pred HhHcccCCceeEEEEEEcC-CcEEEEEEeccccCChHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccCCChh
Q 006922 329 AEVLGKGTFGMAYKAILED-GTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLGSVS 407 (625)
Q Consensus 329 ~~~lg~G~~g~Vy~~~~~~-g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~ 407 (625)
.+.||+|+||+||+|.... +..||||+++......+.+.+|++++.+++||||++++++|...+..++||||+++|+|.
T Consensus 225 ~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~~~g~L~ 304 (495)
T 1opk_A 225 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 304 (495)
T ss_dssp EEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHH
T ss_pred eeEecCCCCeEEEEEEEcCCCeEEEEEEecCcccchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEccCCCCHH
Confidence 3579999999999999764 889999999877667788999999999999999999999999999999999999999999
Q ss_pred hhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEeccccccccccccc----c
Q 006922 408 AMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAP----V 483 (625)
Q Consensus 408 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~----~ 483 (625)
+++..... ..+++..+..++.|+++||+|||+++ |+||||||+|||++.++.+||+|||+++....... .
T Consensus 305 ~~l~~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~ 378 (495)
T 1opk_A 305 DYLRECNR---QEVSAVVLLYMATQISSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 378 (495)
T ss_dssp HHHHHSCT---TTSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEECCTT
T ss_pred HHHHhcCc---CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChhhEEECCCCcEEEeecccceeccCCceeecCC
Confidence 99976432 34899999999999999999999998 99999999999999999999999999987643221 1
Q ss_pred cccCCCcCCccccCCCCCCCccchhhhHHHHHHHHh-CCCCCCCCCCcchhhHHHHHHHHhhcccccccccccccCCCCc
Q 006922 484 IARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNI 562 (625)
Q Consensus 484 ~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 562 (625)
..++..|+|||++....++.++|||||||++|||+| |+.||......+....+. ... ..+..
T Consensus 379 ~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~~~-------~~~----------~~~~~ 441 (495)
T 1opk_A 379 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-------KDY----------RMERP 441 (495)
T ss_dssp CCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHH-------TTC----------CCCCC
T ss_pred CcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-------cCC----------CCCCC
Confidence 234567999999988889999999999999999999 999998765444332221 110 00111
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCC
Q 006922 563 EEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPN 600 (625)
Q Consensus 563 ~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~ 600 (625)
.....++.+++.+||+.||++|||+.||++.|+.+...
T Consensus 442 ~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~~ 479 (495)
T 1opk_A 442 EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 479 (495)
T ss_dssp TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCSS
T ss_pred CCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHhc
Confidence 22234677888899999999999999999999988654
No 39
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=4.2e-42 Score=355.83 Aligned_cols=247 Identities=22% Similarity=0.349 Sum_probs=198.1
Q ss_pred hHcccCCceeEEEEEEc-CCcE----EEEEEecccc--CChHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEecc
Q 006922 330 EVLGKGTFGMAYKAILE-DGTT----VVVKRLKDVN--VGKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYS 402 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~-~g~~----vavK~l~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 402 (625)
+.||+|+||+||+|... +++. ||+|.+.... ...+.+.+|+.++.+++||||+++++++. .+..++||||++
T Consensus 19 ~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~ 97 (325)
T 3kex_A 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQLVTQYLP 97 (325)
T ss_dssp EEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEEEEECCT
T ss_pred eeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEEEEEeCC
Confidence 57999999999999954 4543 7888876442 22356789999999999999999999986 567899999999
Q ss_pred CCChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEecccccccccccc-
Q 006922 403 LGSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALA- 481 (625)
Q Consensus 403 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~- 481 (625)
+|+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 98 ~~~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~ 170 (325)
T 3kex_A 98 LGSLLDHVRQHR----GALGPQLLLNWGVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDK 170 (325)
T ss_dssp TCBSHHHHHSSG----GGSCTTHHHHHHHHHHHHHHHHHHTT---CCCSCCSSTTEEESSSSCEEECSCSGGGGSCCCTT
T ss_pred CCCHHHHHHHcc----ccCCHHHHHHHHHHHHHHHHHHHhCC---CCCCccchheEEECCCCeEEECCCCcccccCcccc
Confidence 999999997643 24889999999999999999999998 9999999999999999999999999998764322
Q ss_pred ----cccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHh-CCCCCCCCCCcchhhHHHHHHHHhhcccccccccccc
Q 006922 482 ----PVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVEL 556 (625)
Q Consensus 482 ----~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 556 (625)
....++..|+|||++.+..++.++|||||||++|||+| |+.||......+....+. ... ..
T Consensus 171 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~-------~~~--~~----- 236 (325)
T 3kex_A 171 QLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLE-------KGE--RL----- 236 (325)
T ss_dssp CCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHH-------TTC--BC-----
T ss_pred cccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHHH-------cCC--CC-----
Confidence 23356678999999998899999999999999999999 999998765544433222 100 00
Q ss_pred cCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCC
Q 006922 557 LRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPND 601 (625)
Q Consensus 557 ~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~ 601 (625)
........++.+++.+||..||.+||++.|+++.|+.+....
T Consensus 237 ---~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~~ 278 (325)
T 3kex_A 237 ---AQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARDP 278 (325)
T ss_dssp ---CCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTSH
T ss_pred ---CCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcc
Confidence 001111224667888999999999999999999999987653
No 40
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.7e-41 Score=348.38 Aligned_cols=252 Identities=23% Similarity=0.408 Sum_probs=194.6
Q ss_pred hHcccCCceeEEEEEEcCCcEEEEEEeccccCChHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccCCChhhh
Q 006922 330 EVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLGSVSAM 409 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~ 409 (625)
+.||+|+||+||+|... ++.||+|++... ...+.+.+|++++.+++||||+++++++. +..++||||+++|+|.++
T Consensus 14 ~~lg~G~~g~V~~~~~~-~~~vavK~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~~~~~~L~~~ 89 (307)
T 2eva_A 14 EVVGRGAFGVVCKAKWR-AKDVAIKQIESE-SERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNV 89 (307)
T ss_dssp EEEECCSSSEEEEEEET-TEEEEEEECSST-THHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEECCTTCBHHHH
T ss_pred eEeecCCCceEEEEEEC-CeeEEEEEecCh-hHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEcCCCCCHHHH
Confidence 57999999999999875 789999999753 23467899999999999999999999876 458999999999999999
Q ss_pred hccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCC-eeEecccccccccccccccccCC
Q 006922 410 LHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQY-GCVSDLGLTTITSALAPVIARAA 488 (625)
Q Consensus 410 l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~-~kl~DfGla~~~~~~~~~~~~~~ 488 (625)
+.... ....+++..+..++.|+++||+|||+.+..+|+||||||+||+++.++. +||+|||++...........++.
T Consensus 90 l~~~~--~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~ 167 (307)
T 2eva_A 90 LHGAE--PLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSA 167 (307)
T ss_dssp HHCSS--SEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC------------CCT
T ss_pred HhccC--CCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccccccCCCCC
Confidence 97643 1224789999999999999999999943234999999999999998887 79999999987665545557899
Q ss_pred CcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccccccccccCCCCcHHHHHH
Q 006922 489 GYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIEEEMVE 568 (625)
Q Consensus 489 ~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 568 (625)
.|+|||.+.+..++.++||||||+++|||+||+.||........ .... ...... .. +........
T Consensus 168 ~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-~~~~---~~~~~~-~~----------~~~~~~~~~ 232 (307)
T 2eva_A 168 AWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAF-RIMW---AVHNGT-RP----------PLIKNLPKP 232 (307)
T ss_dssp TSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHH-HHHH---HHHTTC-CC----------CCBTTCCHH
T ss_pred ceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHH-HHHH---HHhcCC-CC----------CcccccCHH
Confidence 99999999999999999999999999999999999976543321 1111 111110 00 111112235
Q ss_pred HHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCCC
Q 006922 569 MLQIAMSCVVRMPDQRPKMPDVVRVIENVRPNDS 602 (625)
Q Consensus 569 l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~~ 602 (625)
+.+++.+||+.||++|||+.|+++.|+.+.....
T Consensus 233 l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 266 (307)
T 2eva_A 233 IESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFP 266 (307)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGCC
T ss_pred HHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhcc
Confidence 6778889999999999999999999999876543
No 41
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.2e-41 Score=354.64 Aligned_cols=237 Identities=18% Similarity=0.291 Sum_probs=190.0
Q ss_pred hHcccCCceeEEEEEE-cCCcEEEEEEeccccC--ChHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccCCCh
Q 006922 330 EVLGKGTFGMAYKAIL-EDGTTVVVKRLKDVNV--GKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLGSV 406 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 406 (625)
+.||+|+||+||+|.. .+|+.||||++..... ....+.+|++++.+++||||+++++++...+..++||||+++|+|
T Consensus 16 ~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~~gg~L 95 (347)
T 3zgw_A 16 ETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGEL 95 (347)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTTCBH
T ss_pred EEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEEeCCCCCCH
Confidence 5799999999999995 5799999999976532 235689999999999999999999999999999999999999999
Q ss_pred hhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEeccccccccccc----cc
Q 006922 407 SAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSAL----AP 482 (625)
Q Consensus 407 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~----~~ 482 (625)
.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++...... ..
T Consensus 96 ~~~l~~~~-----~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~ 167 (347)
T 3zgw_A 96 FDYIISQD-----RLSEEETRVVFRQIVSAVAYVHSQG---YAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQ 167 (347)
T ss_dssp HHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBC----------
T ss_pred HHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCccHHHEEEcCCCCEEEEeccCcccccCCCCcccc
Confidence 99997643 3899999999999999999999998 999999999999999999999999998765432 22
Q ss_pred ccccCCCcCCccccCCCCC-CCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccccccccccCCCC
Q 006922 483 VIARAAGYRAPEVTDSRKA-TQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPN 561 (625)
Q Consensus 483 ~~~~~~~y~aPE~~~~~~~-~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 561 (625)
...||..|+|||++.+..+ +.++||||+||++|||++|+.||......+.. ..+ ..... ..
T Consensus 168 ~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~---~~i---~~~~~------------~~ 229 (347)
T 3zgw_A 168 TCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALY---KKI---MRGKY------------DV 229 (347)
T ss_dssp ----CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH---HHH---HHTCC------------CC
T ss_pred ccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHH---HHH---HcCCC------------CC
Confidence 3468889999999988775 88999999999999999999999764332221 111 11110 00
Q ss_pred cHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006922 562 IEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR 592 (625)
Q Consensus 562 ~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 592 (625)
......++.+++.+||+.||.+|||+.|+++
T Consensus 230 p~~~s~~~~~li~~~L~~dP~~Rps~~eil~ 260 (347)
T 3zgw_A 230 PKWLSPSSILLLQQMLQVDPKKRISMKNLLN 260 (347)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CCCCCHHHHHHHHHHcccCHhHCcCHHHHhc
Confidence 1111235567888999999999999999986
No 42
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=9.6e-42 Score=369.11 Aligned_cols=247 Identities=27% Similarity=0.399 Sum_probs=201.5
Q ss_pred hHcccCCceeEEEEEEcCCcEEEEEEeccccCChHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccCCChhhh
Q 006922 330 EVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLGSVSAM 409 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~ 409 (625)
+.||+|+||+||+|...++..||||+++......+.+.+|++++.+++||||+++++++.. +..++||||+++|+|.++
T Consensus 190 ~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~~~gsL~~~ 268 (452)
T 1fmk_A 190 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDF 268 (452)
T ss_dssp EEEEECSSCEEEEEEETTTEEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTCBHHHH
T ss_pred eeecCCCCeEEEEEEECCCceEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhhcCCCHHHH
Confidence 5699999999999999888899999998766667889999999999999999999999876 678999999999999999
Q ss_pred hccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEecccccccccccc----cccc
Q 006922 410 LHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALA----PVIA 485 (625)
Q Consensus 410 l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~----~~~~ 485 (625)
+..... ..+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++...... ....
T Consensus 269 l~~~~~---~~~~~~~~~~i~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~ 342 (452)
T 1fmk_A 269 LKGETG---KYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAK 342 (452)
T ss_dssp HSHHHH---TTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCCTTC--------------
T ss_pred HHhcCC---CCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChhhEEECCCCCEEECCCccceecCCCceecccCCc
Confidence 975421 24899999999999999999999998 9999999999999999999999999998764321 1223
Q ss_pred cCCCcCCccccCCCCCCCccchhhhHHHHHHHHh-CCCCCCCCCCcchhhHHHHHHHHhhcccccccccccccCCCCcHH
Q 006922 486 RAAGYRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIEE 564 (625)
Q Consensus 486 ~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 564 (625)
++..|+|||.+....++.++|||||||++|||+| |+.||.+....+....+ . ... ..+....
T Consensus 343 ~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i---~---~~~-----------~~~~~~~ 405 (452)
T 1fmk_A 343 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV---E---RGY-----------RMPCPPE 405 (452)
T ss_dssp CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHH---H---TTC-----------CCCCCTT
T ss_pred ccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHH---H---cCC-----------CCCCCCC
Confidence 4567999999988899999999999999999999 99999765433322211 1 110 0111122
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCC
Q 006922 565 EMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPN 600 (625)
Q Consensus 565 ~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~ 600 (625)
....+.+++.+||+.+|++|||++++++.|+.+...
T Consensus 406 ~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~ 441 (452)
T 1fmk_A 406 CPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 441 (452)
T ss_dssp SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSC
T ss_pred CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhcc
Confidence 334677888999999999999999999999988654
No 43
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=6.6e-42 Score=354.68 Aligned_cols=246 Identities=20% Similarity=0.379 Sum_probs=196.7
Q ss_pred hHcccCCceeEEEEEEc-CCc----EEEEEEecccc--CChHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEecc
Q 006922 330 EVLGKGTFGMAYKAILE-DGT----TVVVKRLKDVN--VGKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYS 402 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~-~g~----~vavK~l~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 402 (625)
+.||+|+||+||+|... +++ .||+|.++... ...+.+.+|++++.+++||||++++++|... ..++|+||++
T Consensus 21 ~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~~~~v~e~~~ 99 (327)
T 3poz_A 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQLMP 99 (327)
T ss_dssp EEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESS-SEEEEEECCT
T ss_pred eEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecC-CeEEEEEecC
Confidence 57999999999999953 444 46888886543 3346799999999999999999999999875 4789999999
Q ss_pred CCChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEeccccccccccccc
Q 006922 403 LGSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAP 482 (625)
Q Consensus 403 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~ 482 (625)
+|+|.+++..... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.......
T Consensus 100 ~g~L~~~l~~~~~----~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 172 (327)
T 3poz_A 100 FGCLLDYVREHKD----NIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK 172 (327)
T ss_dssp TCBHHHHHHHSTT----SCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTCC
T ss_pred CCcHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCChheEEECCCCCEEEccCcceeEccCCcc
Confidence 9999999986532 4899999999999999999999998 99999999999999999999999999987643221
Q ss_pred -----ccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHh-CCCCCCCCCCcchhhHHHHHHHHhhcccccccccccc
Q 006922 483 -----VIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVEL 556 (625)
Q Consensus 483 -----~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 556 (625)
...++..|+|||++.+..++.++|||||||++|||+| |+.||......+....+. ...
T Consensus 173 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~-------~~~--------- 236 (327)
T 3poz_A 173 EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE-------KGE--------- 236 (327)
T ss_dssp -------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHH-------TTC---------
T ss_pred cccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHHH-------cCC---------
Confidence 2234667999999999999999999999999999999 999998765544333222 100
Q ss_pred cCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCC
Q 006922 557 LRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPN 600 (625)
Q Consensus 557 ~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~ 600 (625)
..+.......++.+++.+||+.+|.+||++.|+++.|+.+...
T Consensus 237 -~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~ 279 (327)
T 3poz_A 237 -RLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp -CCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTS
T ss_pred -CCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhh
Confidence 0111122334677888999999999999999999999988764
No 44
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=2e-41 Score=346.42 Aligned_cols=249 Identities=23% Similarity=0.415 Sum_probs=192.9
Q ss_pred hHcccCCceeEEEEEEcCCcEEEEEEeccccCChHHHHHHHHHHHc--CCCCceecceeEEEec----CceEEEEEeccC
Q 006922 330 EVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGS--IRHENVVELKAYYYSK----DEKLMVYDYYSL 403 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~--l~h~niv~l~~~~~~~----~~~~lv~e~~~~ 403 (625)
+.||+|+||+||+|.. +|+.||||++.... ...+.+|.+++.. ++||||+++++++... ...++||||+++
T Consensus 14 ~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~--~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~~~ 90 (301)
T 3q4u_A 14 ECVGKGRYGEVWRGSW-QGENVAVKIFSSRD--EKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEM 90 (301)
T ss_dssp EEEEECSSEEEEEEEE-TTEEEEEEEECGGG--HHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEEECCCTT
T ss_pred EeeccCCCcEEEEEEE-CCEEEEEEEecccc--chhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEehhhccC
Confidence 5799999999999987 68999999997542 3455666666665 7999999999997653 357899999999
Q ss_pred CChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHH--------hcCCCCceecCCCCCCEEeCCCCCeeEecccccc
Q 006922 404 GSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIH--------AANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTT 475 (625)
Q Consensus 404 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH--------~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~ 475 (625)
|+|.+++... .+++..+.+++.|++.||+||| +.+ |+||||||+|||++.++.+||+|||+++
T Consensus 91 g~L~~~l~~~------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~Nill~~~~~~kl~Dfg~a~ 161 (301)
T 3q4u_A 91 GSLYDYLQLT------TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPA---IAHRDLKSKNILVKKNGQCCIADLGLAV 161 (301)
T ss_dssp CBHHHHHTTC------CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCE---EECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred CCHHHHHhhc------ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCC---eecCCCChHhEEEcCCCCEEEeeCCCee
Confidence 9999999643 3899999999999999999999 665 9999999999999999999999999997
Q ss_pred cccccc-------cccccCCCcCCccccCCC------CCCCccchhhhHHHHHHHHhC----------CCCCCCCCCcch
Q 006922 476 ITSALA-------PVIARAAGYRAPEVTDSR------KATQASDVYSFGVVLLEILTG----------KSPIHTTGGDEL 532 (625)
Q Consensus 476 ~~~~~~-------~~~~~~~~y~aPE~~~~~------~~~~~~DvwS~Gvil~elltG----------~~p~~~~~~~~~ 532 (625)
...... ....+|..|+|||++.+. .++.++|||||||++|||+|| +.||........
T Consensus 162 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~ 241 (301)
T 3q4u_A 162 MHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDP 241 (301)
T ss_dssp EEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSC
T ss_pred ecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCCc
Confidence 654322 123688899999999876 455799999999999999999 888865433221
Q ss_pred -hhHHHHHHHHhhcccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhh
Q 006922 533 -VHLVRWVHSVVREEWTAEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENV 597 (625)
Q Consensus 533 -~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~ 597 (625)
.... ......... .+.............++.+++.+||+.||++|||+.||++.|+++
T Consensus 242 ~~~~~---~~~~~~~~~----~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 242 SFEDM---RKVVCVDQQ----RPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp CHHHH---HHHHTTSCC----CCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred chhhh---hHHHhccCC----CCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 1111 111111100 001100001234567788999999999999999999999999876
No 45
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=3.9e-41 Score=343.71 Aligned_cols=264 Identities=14% Similarity=0.129 Sum_probs=212.4
Q ss_pred hHcccCCceeEEEEEE-cCCcEEEEEEeccccCChHHHHHHHHHHHcC-CCCceecceeEEEecCceEEEEEeccCCChh
Q 006922 330 EVLGKGTFGMAYKAIL-EDGTTVVVKRLKDVNVGKRDFEQQMEIVGSI-RHENVVELKAYYYSKDEKLMVYDYYSLGSVS 407 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~ 407 (625)
+.||+|+||+||+|.. .+|+.||||++.... ..+.+.+|++++.++ +|+|++++++++......++||||+ +++|.
T Consensus 16 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~ 93 (298)
T 1csn_A 16 RRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS-DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL-GPSLE 93 (298)
T ss_dssp EEEEECSSCEEEEEEETTTTEEEEEEEEECCT-TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC-CCBHH
T ss_pred EEEeecCCEEEEEEEECCCCcEEEEEEeccCC-ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEec-CCCHH
Confidence 5699999999999995 579999999986533 345788999999999 7999999999999999999999999 99999
Q ss_pred hhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCC-----eeEeccccccccccc--
Q 006922 408 AMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQY-----GCVSDLGLTTITSAL-- 480 (625)
Q Consensus 408 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~-----~kl~DfGla~~~~~~-- 480 (625)
+++..... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++. +||+|||+++.....
T Consensus 94 ~~l~~~~~----~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~~ 166 (298)
T 1csn_A 94 DLLDLCGR----KFSVKTVAMAAKQMLARVQSIHEKS---LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVT 166 (298)
T ss_dssp HHHHHTTT----CCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTT
T ss_pred HHHHHhcc----CCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEeccCCCCCCCeEEEEECccccccccccc
Confidence 99986432 4899999999999999999999998 999999999999988776 999999999876432
Q ss_pred --------ccccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccccc
Q 006922 481 --------APVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVF 552 (625)
Q Consensus 481 --------~~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 552 (625)
.....||..|+|||.+.+..++.++|||||||++|||++|+.||..............+............
T Consensus 167 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~- 245 (298)
T 1csn_A 167 KQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLREL- 245 (298)
T ss_dssp CCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHH-
T ss_pred cccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCccHHHH-
Confidence 12345888999999999999999999999999999999999999876544433333322221111110000
Q ss_pred cccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCCCCCCCCCCCCC
Q 006922 553 DVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPNDSENRPSSGNKS 612 (625)
Q Consensus 553 d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~~~~~~~~~~~~ 612 (625)
. + ....++.+++.+||+.+|++||++++|++.|+++..+.........+|.
T Consensus 246 ----~--~---~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~~~~~~~~dw~ 296 (298)
T 1csn_A 246 ----C--A---GFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLNTTEDENFDWN 296 (298)
T ss_dssp ----T--T---TSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTCCSCSCCGGG
T ss_pred ----H--h---hCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcCCCCCCccccC
Confidence 0 0 1124677888899999999999999999999999876665555555554
No 46
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=1.8e-40 Score=340.43 Aligned_cols=272 Identities=31% Similarity=0.522 Sum_probs=215.6
Q ss_pred cccCHHHHHHHHH-----------hHcccCCceeEEEEEEcCCcEEEEEEecccc-----CChHHHHHHHHHHHcCCCCc
Q 006922 317 YAFDLEDLLRASA-----------EVLGKGTFGMAYKAILEDGTTVVVKRLKDVN-----VGKRDFEQQMEIVGSIRHEN 380 (625)
Q Consensus 317 ~~~~~~~~~~~~~-----------~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~-----~~~~~~~~e~~~l~~l~h~n 380 (625)
..|.++++..++. +.||+|+||+||+|.. +++.||||++.... ...+.+.+|++++.+++|||
T Consensus 13 ~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 91 (307)
T 2nru_A 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHEN 91 (307)
T ss_dssp EECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTT
T ss_pred CcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCC
Confidence 4466677766552 5699999999999986 58999999997532 12356889999999999999
Q ss_pred eecceeEEEecCceEEEEEeccCCChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEe
Q 006922 381 VVELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFL 460 (625)
Q Consensus 381 iv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll 460 (625)
|+++++++...+..++||||+++|+|.+++..... ..+++|..+..++.|++.||+|||+.+ |+||||||+||++
T Consensus 92 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dlkp~Nili 166 (307)
T 2nru_A 92 LVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDG--TPPLSWHMRCKIAQGAANGINFLHENH---HIHRDIKSANILL 166 (307)
T ss_dssp BCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGG--CCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEE
T ss_pred eEEEEEEEecCCceEEEEEecCCCcHHHHHHhccC--CCCCCHHHHHHHHHHHHHHHHHHhcCC---eecCCCCHHHEEE
Confidence 99999999999999999999999999999875432 235899999999999999999999998 9999999999999
Q ss_pred CCCCCeeEeccccccccccc-----ccccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhH
Q 006922 461 NSQQYGCVSDLGLTTITSAL-----APVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHL 535 (625)
Q Consensus 461 ~~~~~~kl~DfGla~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~ 535 (625)
+.++.+||+|||+++..... .....++..|+|||.+.+ .++.++||||||+++|||++|+.||...........
T Consensus 167 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~ 245 (307)
T 2nru_A 167 DEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLD 245 (307)
T ss_dssp CTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTH
T ss_pred cCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHH
Confidence 99999999999999865432 123457888999998875 588999999999999999999999986554332221
Q ss_pred HHHHHHHhhc-ccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCC
Q 006922 536 VRWVHSVVRE-EWTAEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRP 599 (625)
Q Consensus 536 ~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~ 599 (625)
+ ....... ....+.++.... .........+.+++.+||..+|.+|||+.|+++.|+++..
T Consensus 246 ~--~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 246 I--KEEIEDEEKTIEDYIDKKMN--DADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp H--HHHHHTTSCCHHHHSCSSCS--CCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred H--HHHhhhhhhhhhhhcccccc--ccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 1 1111111 112222333222 2245566788899999999999999999999999999864
No 47
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.9e-41 Score=358.96 Aligned_cols=255 Identities=25% Similarity=0.357 Sum_probs=205.3
Q ss_pred hHcccCCceeEEEEEEc--------CCcEEEEEEeccccCC--hHHHHHHHHHHHcC-CCCceecceeEEEecCceEEEE
Q 006922 330 EVLGKGTFGMAYKAILE--------DGTTVVVKRLKDVNVG--KRDFEQQMEIVGSI-RHENVVELKAYYYSKDEKLMVY 398 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~--------~g~~vavK~l~~~~~~--~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 398 (625)
+.||+|+||+||+|... .+..||||+++..... .+.+.+|++++.++ +||||+++++++...+..++||
T Consensus 75 ~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~lv~ 154 (382)
T 3tt0_A 75 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIV 154 (382)
T ss_dssp EEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred eEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCCceEEEE
Confidence 56999999999999852 2468999999865332 25688999999999 8999999999999999999999
Q ss_pred EeccCCChhhhhccccCC-----------CCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCee
Q 006922 399 DYYSLGSVSAMLHSERGE-----------GRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGC 467 (625)
Q Consensus 399 e~~~~g~L~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~k 467 (625)
||+++|+|.+++...... ....+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+|
T Consensus 155 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~k 231 (382)
T 3tt0_A 155 EYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMK 231 (382)
T ss_dssp ECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEE
T ss_pred EecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCcceEEEcCCCcEE
Confidence 999999999999865421 1235899999999999999999999998 99999999999999999999
Q ss_pred Eeccccccccccc-----ccccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHh-CCCCCCCCCCcchhhHHHHHHH
Q 006922 468 VSDLGLTTITSAL-----APVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHS 541 (625)
Q Consensus 468 l~DfGla~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~ 541 (625)
|+|||+++..... .....++..|+|||++.+..++.++|||||||++|||++ |+.||......+.. ..+.
T Consensus 232 L~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~~~---~~~~- 307 (382)
T 3tt0_A 232 IADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF---KLLK- 307 (382)
T ss_dssp ECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHH---HHHH-
T ss_pred EcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHH---HHHH-
Confidence 9999999876432 122345677999999999999999999999999999999 99999765433222 2111
Q ss_pred HhhcccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCCCCC
Q 006922 542 VVREEWTAEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPNDSEN 604 (625)
Q Consensus 542 ~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~~~~ 604 (625)
..... ........++.+++.+||+.+|++|||+.|+++.|+.+.......
T Consensus 308 ---~~~~~----------~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~~ 357 (382)
T 3tt0_A 308 ---EGHRM----------DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSNQ 357 (382)
T ss_dssp ---TTCCC----------CCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSCSC
T ss_pred ---cCCCC----------CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhcC
Confidence 11100 001112346778888999999999999999999999997654433
No 48
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1.9e-41 Score=340.24 Aligned_cols=247 Identities=21% Similarity=0.399 Sum_probs=205.8
Q ss_pred hHcccCCceeEEEEEEcCCcEEEEEEeccccCChHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccCCChhhh
Q 006922 330 EVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLGSVSAM 409 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~ 409 (625)
+.||+|+||.||++...+++.||+|+++......+.+.+|++++.+++||||+++++++...+..++||||+++++|.++
T Consensus 14 ~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~ 93 (267)
T 3t9t_A 14 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDY 93 (267)
T ss_dssp EEEEEETTEEEEEEEETTTEEEEEEEECTTTBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCTTCBHHHH
T ss_pred eEecCCCceeEEEEEecCCCeEEEEEccccCCCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCCCCcHHHH
Confidence 56999999999999988889999999998776778899999999999999999999999999999999999999999999
Q ss_pred hccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEecccccccccccc----cccc
Q 006922 410 LHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALA----PVIA 485 (625)
Q Consensus 410 l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~----~~~~ 485 (625)
+..... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++...... ....
T Consensus 94 ~~~~~~----~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 166 (267)
T 3t9t_A 94 LRTQRG----LFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTK 166 (267)
T ss_dssp HHHTTT----CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTSTT
T ss_pred HhhCcc----cCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCchheEEECCCCCEEEccccccccccccccccccccc
Confidence 976432 4899999999999999999999998 9999999999999999999999999998764321 2234
Q ss_pred cCCCcCCccccCCCCCCCccchhhhHHHHHHHHh-CCCCCCCCCCcchhhHHHHHHHHhhcccccccccccccCCCCcHH
Q 006922 486 RAAGYRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIEE 564 (625)
Q Consensus 486 ~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 564 (625)
++..|+|||.+.+..++.++||||||+++|||++ |+.||......+.. ..+. .... . .....
T Consensus 167 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~---~~i~----~~~~--~--------~~~~~ 229 (267)
T 3t9t_A 167 FPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVV---EDIS----TGFR--L--------YKPRL 229 (267)
T ss_dssp CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHH---HHHH----TTCC--C--------CCCTT
T ss_pred ccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHH---HHHh----cCCc--C--------CCCcc
Confidence 5567999999988889999999999999999999 89999765432221 1111 1100 0 00111
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCC
Q 006922 565 EMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPN 600 (625)
Q Consensus 565 ~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~ 600 (625)
....+.+++.+||..+|++||++.|+++.|+++..+
T Consensus 230 ~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (267)
T 3t9t_A 230 ASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 265 (267)
T ss_dssp SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred CcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 223567788899999999999999999999988654
No 49
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=5.7e-41 Score=348.51 Aligned_cols=237 Identities=23% Similarity=0.336 Sum_probs=196.4
Q ss_pred hHcccCCceeEEEEEEc-CCcEEEEEEeccc----cCChHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccCC
Q 006922 330 EVLGKGTFGMAYKAILE-DGTTVVVKRLKDV----NVGKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLG 404 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~----~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 404 (625)
+.||+|+||+||+++.. +|+.||+|++++. ......+.+|++++..++||||+++++++...+..++||||+++|
T Consensus 11 ~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~E~~~gg 90 (337)
T 1o6l_A 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 90 (337)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEECCTTC
T ss_pred EEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEEeCCCCC
Confidence 57999999999999965 6999999999753 223466889999999999999999999999999999999999999
Q ss_pred ChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEecccccccccc---cc
Q 006922 405 SVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSA---LA 481 (625)
Q Consensus 405 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~---~~ 481 (625)
+|..++.... .+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++.... ..
T Consensus 91 ~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~ 162 (337)
T 1o6l_A 91 ELFFHLSRER-----VFTEERARFYGAEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM 162 (337)
T ss_dssp BHHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTCCB
T ss_pred cHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---eecCcCCHHHEEECCCCCEEEeeccchhhcccCCCcc
Confidence 9999987643 3899999999999999999999998 99999999999999999999999999986422 23
Q ss_pred cccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccccccccccCCCC
Q 006922 482 PVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPN 561 (625)
Q Consensus 482 ~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 561 (625)
....||..|+|||++.+..++.++|||||||++|||++|+.||......+....+ ..... ..+
T Consensus 163 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i------~~~~~----------~~p- 225 (337)
T 1o6l_A 163 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELI------LMEEI----------RFP- 225 (337)
T ss_dssp CCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH------HHCCC----------CCC-
T ss_pred cccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHH------HcCCC----------CCC-
Confidence 3457899999999999999999999999999999999999999764432222111 11110 011
Q ss_pred cHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 006922 562 IEEEMVEMLQIAMSCVVRMPDQRP-----KMPDVVR 592 (625)
Q Consensus 562 ~~~~~~~l~~l~~~Cl~~~P~~RP-----s~~ev~~ 592 (625)
.....++.+++.+||+.||++|| ++.|+++
T Consensus 226 -~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~ 260 (337)
T 1o6l_A 226 -RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 260 (337)
T ss_dssp -TTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred -CCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHc
Confidence 11223566778899999999999 8999875
No 50
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.5e-41 Score=357.55 Aligned_cols=252 Identities=21% Similarity=0.322 Sum_probs=202.6
Q ss_pred hHcccCCceeEEEEEEc------CCcEEEEEEeccccC--ChHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEec
Q 006922 330 EVLGKGTFGMAYKAILE------DGTTVVVKRLKDVNV--GKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYY 401 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 401 (625)
+.||+|+||+||+|... +++.||||+++.... ....+.+|+.++.+++||||+++++++...+..++||||+
T Consensus 77 ~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~ 156 (367)
T 3l9p_A 77 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELM 156 (367)
T ss_dssp EECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred eEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCEEEEEeC
Confidence 56999999999999842 467899999975432 2356889999999999999999999999999999999999
Q ss_pred cCCChhhhhccccCC--CCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCC---CeeEeccccccc
Q 006922 402 SLGSVSAMLHSERGE--GRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQ---YGCVSDLGLTTI 476 (625)
Q Consensus 402 ~~g~L~~~l~~~~~~--~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~---~~kl~DfGla~~ 476 (625)
++|+|.+++...... ....+++..+..++.|+++||+|||+.+ |+||||||+|||++.++ .+||+|||+++.
T Consensus 157 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~~~~kL~DFG~a~~ 233 (367)
T 3l9p_A 157 AGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARD 233 (367)
T ss_dssp TTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEECCCHHHHH
T ss_pred CCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChhhEEEecCCCCceEEECCCccccc
Confidence 999999999875431 2235899999999999999999999998 99999999999999555 599999999986
Q ss_pred ccc-----cccccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHh-CCCCCCCCCCcchhhHHHHHHHHhhcccccc
Q 006922 477 TSA-----LAPVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAE 550 (625)
Q Consensus 477 ~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 550 (625)
... ......+|..|+|||++.+..++.++|||||||++|||+| |+.||......+....+ . ....
T Consensus 234 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~i---~---~~~~--- 304 (367)
T 3l9p_A 234 IYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV---T---SGGR--- 304 (367)
T ss_dssp HHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHH---H---TTCC---
T ss_pred cccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH---H---cCCC---
Confidence 422 1223456778999999988899999999999999999998 99999765433322211 1 1110
Q ss_pred cccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCC
Q 006922 551 VFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPND 601 (625)
Q Consensus 551 ~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~ 601 (625)
..........+.+++.+||+.+|++||++.||++.|+.+....
T Consensus 305 --------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~ 347 (367)
T 3l9p_A 305 --------MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 347 (367)
T ss_dssp --------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred --------CCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhCh
Confidence 0111122345778888999999999999999999999887653
No 51
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=2.4e-41 Score=352.58 Aligned_cols=252 Identities=23% Similarity=0.386 Sum_probs=202.7
Q ss_pred hHcccCCceeEEEEEEc------CCcEEEEEEeccccCC--hHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEec
Q 006922 330 EVLGKGTFGMAYKAILE------DGTTVVVKRLKDVNVG--KRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYY 401 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~--~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 401 (625)
+.||+|+||+||+|... +++.||||+++..... .+.+.+|++++.+++||||+++++++...+..++||||+
T Consensus 53 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~ 132 (343)
T 1luf_A 53 RDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYM 132 (343)
T ss_dssp EEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred eeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCceEEEEecC
Confidence 56999999999999964 3488999999864322 357899999999999999999999999999999999999
Q ss_pred cCCChhhhhccccCC-------------------CCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCC
Q 006922 402 SLGSVSAMLHSERGE-------------------GRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNS 462 (625)
Q Consensus 402 ~~g~L~~~l~~~~~~-------------------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~ 462 (625)
++|+|.+++...... ....+++.++..++.|+++||+|||+.+ |+||||||+|||++.
T Consensus 133 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIl~~~ 209 (343)
T 1luf_A 133 AYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK---FVHRDLATRNCLVGE 209 (343)
T ss_dssp TTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECG
T ss_pred CCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCcceEEECC
Confidence 999999999864321 1145899999999999999999999998 999999999999999
Q ss_pred CCCeeEeccccccccccc-----ccccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHh-CCCCCCCCCCcchhhHH
Q 006922 463 QQYGCVSDLGLTTITSAL-----APVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLV 536 (625)
Q Consensus 463 ~~~~kl~DfGla~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~~~~ 536 (625)
++.+||+|||+++..... .....++..|+|||.+.+..++.++||||||+++|||+| |+.||......+....
T Consensus 210 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~- 288 (343)
T 1luf_A 210 NMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYY- 288 (343)
T ss_dssp GGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHH-
T ss_pred CCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCChHHHHHH-
Confidence 999999999999865322 122356778999999988889999999999999999999 9999976543322211
Q ss_pred HHHHHHhhcccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCC
Q 006922 537 RWVHSVVREEWTAEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPND 601 (625)
Q Consensus 537 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~ 601 (625)
+ ..+... +.......++.+++.+||+.||++||++.|+++.|+++....
T Consensus 289 --~----~~~~~~----------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~ 337 (343)
T 1luf_A 289 --V----RDGNIL----------ACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERA 337 (343)
T ss_dssp --H----HTTCCC----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC--
T ss_pred --H----hCCCcC----------CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhh
Confidence 1 111100 011122346778888999999999999999999999987754
No 52
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=3e-41 Score=339.72 Aligned_cols=245 Identities=24% Similarity=0.389 Sum_probs=189.4
Q ss_pred hHcccCCceeEEEEEEcCCcEEEEEEeccccC-----ChHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccCC
Q 006922 330 EVLGKGTFGMAYKAILEDGTTVVVKRLKDVNV-----GKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLG 404 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~-----~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 404 (625)
+.||+|+||+||+|... |+.||||+++.... ..+.+.+|++++..++||||+++++++...+..++||||++++
T Consensus 13 ~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 91 (271)
T 3dtc_A 13 EIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGG 91 (271)
T ss_dssp EEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEEECCTTE
T ss_pred eeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEEcCCCC
Confidence 56999999999999975 89999999875422 2367889999999999999999999999999999999999999
Q ss_pred ChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCC--------CCCeeEeccccccc
Q 006922 405 SVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNS--------QQYGCVSDLGLTTI 476 (625)
Q Consensus 405 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~--------~~~~kl~DfGla~~ 476 (625)
+|.+++... .+++..+..++.|+++||+|||+.+..+|+||||||+||+++. ++.+||+|||+++.
T Consensus 92 ~L~~~~~~~------~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~ 165 (271)
T 3dtc_A 92 PLNRVLSGK------RIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLARE 165 (271)
T ss_dssp EHHHHHTSS------CCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC---
T ss_pred CHHHHhhcC------CCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCcccc
Confidence 999998643 3899999999999999999999987556899999999999986 67899999999986
Q ss_pred cccc-ccccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhccccccccccc
Q 006922 477 TSAL-APVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVE 555 (625)
Q Consensus 477 ~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 555 (625)
.... .....++..|+|||.+.+..++.++||||||+++|||++|+.||......+... .......
T Consensus 166 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~------~~~~~~~-------- 231 (271)
T 3dtc_A 166 WHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAY------GVAMNKL-------- 231 (271)
T ss_dssp ----------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHH------HHHTSCC--------
T ss_pred cccccccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH------hhhcCCC--------
Confidence 5432 223467889999999988889999999999999999999999997654322111 1111110
Q ss_pred ccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhh
Q 006922 556 LLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENV 597 (625)
Q Consensus 556 ~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~ 597 (625)
..+........+.+++.+||+.+|.+|||+.|+++.|+++
T Consensus 232 --~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 232 --ALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp --CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred --CCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 0011112234677888899999999999999999999864
No 53
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.5e-41 Score=349.33 Aligned_cols=242 Identities=20% Similarity=0.352 Sum_probs=198.5
Q ss_pred hHcccCCceeEEEEEEc-CCcEEEEEEeccccCChHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccCCChhh
Q 006922 330 EVLGKGTFGMAYKAILE-DGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLGSVSA 408 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~ 408 (625)
+.||+|+||+||++... +++.||+|.++........+.+|++++..++||||+++++++.+.+..++||||+++|+|.+
T Consensus 11 ~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~g~~L~~ 90 (321)
T 1tki_A 11 EDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFISGLDIFE 90 (321)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCCCCBHHH
T ss_pred eEEecCCCeEEEEEEECCCCcEEEEEEEecCcccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeCCCCCHHH
Confidence 56999999999999965 68999999998655455678999999999999999999999999999999999999999999
Q ss_pred hhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCC--CCCeeEecccccccccccc--ccc
Q 006922 409 MLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNS--QQYGCVSDLGLTTITSALA--PVI 484 (625)
Q Consensus 409 ~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~--~~~~kl~DfGla~~~~~~~--~~~ 484 (625)
++.... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++. ++.+||+|||+++...... ...
T Consensus 91 ~l~~~~----~~~~~~~~~~i~~qi~~al~~lH~~g---ivH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~ 163 (321)
T 1tki_A 91 RINTSA----FELNEREIVSYVHQVCEALQFLHSHN---IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLL 163 (321)
T ss_dssp HHTSSS----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEEEEE
T ss_pred HHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCC---CCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCccccc
Confidence 997543 24899999999999999999999998 999999999999987 7899999999998764332 335
Q ss_pred ccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccccccccccCCCCcHH
Q 006922 485 ARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIEE 564 (625)
Q Consensus 485 ~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 564 (625)
.+++.|+|||++.+..++.++|||||||++|||++|+.||......+.... ....... ++... .+ .
T Consensus 164 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~------i~~~~~~---~~~~~--~~---~ 229 (321)
T 1tki_A 164 FTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIEN------IMNAEYT---FDEEA--FK---E 229 (321)
T ss_dssp ESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHH------HHHTCCC---CCHHH--HT---T
T ss_pred cCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHH------HHcCCCC---CChhh--hc---c
Confidence 688899999999988899999999999999999999999976543322211 1111100 00000 01 1
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006922 565 EMVEMLQIAMSCVVRMPDQRPKMPDVVR 592 (625)
Q Consensus 565 ~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 592 (625)
...++.+++.+|+..||.+|||+.|+++
T Consensus 230 ~s~~~~~li~~~L~~dp~~Rpt~~e~l~ 257 (321)
T 1tki_A 230 ISIEAMDFVDRLLVKERKSRMTASEALQ 257 (321)
T ss_dssp SCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred CCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 1245677888999999999999999987
No 54
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=4.4e-41 Score=345.99 Aligned_cols=252 Identities=21% Similarity=0.303 Sum_probs=194.3
Q ss_pred hHcccCCceeEEEEEEcCCcEEEEEEeccccCC---hHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccCCCh
Q 006922 330 EVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVG---KRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLGSV 406 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 406 (625)
+.||+|+||+||+|...+|+.||+|+++..... .+.+.+|++++.+++||||+++++++.+.+..++||||+++ +|
T Consensus 27 ~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~-~l 105 (311)
T 3niz_A 27 EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEK-DL 105 (311)
T ss_dssp EEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEECCSE-EH
T ss_pred hhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEcCCCC-CH
Confidence 569999999999999888999999999754322 35688999999999999999999999999999999999985 78
Q ss_pred hhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEeccccccccccc---ccc
Q 006922 407 SAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSAL---APV 483 (625)
Q Consensus 407 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~---~~~ 483 (625)
.+.+.... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++..... ...
T Consensus 106 ~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~ 178 (311)
T 3niz_A 106 KKVLDENK----TGLQDSQIKIYLYQLLRGVAHCHQHR---ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTH 178 (311)
T ss_dssp HHHHHTCT----TCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC---C
T ss_pred HHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCchHhEEECCCCCEEEccCcCceecCCCcccccC
Confidence 88776543 24899999999999999999999998 999999999999999999999999999876422 223
Q ss_pred cccCCCcCCccccCC-CCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccc---ccccc------
Q 006922 484 IARAAGYRAPEVTDS-RKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWT---AEVFD------ 553 (625)
Q Consensus 484 ~~~~~~y~aPE~~~~-~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~d------ 553 (625)
..+|..|+|||++.+ ..++.++||||+||++|||++|+.||......+....+. ........ ....+
T Consensus 179 ~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~---~~~~~~~~~~~~~~~~~~~~~~ 255 (311)
T 3niz_A 179 EVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIF---SILGTPNPREWPQVQELPLWKQ 255 (311)
T ss_dssp CCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHH---HHHCCCCTTTSGGGTTSHHHHS
T ss_pred CcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHH---HHHCCCChHHhhhhhccchhhh
Confidence 467889999999876 568999999999999999999999998765544332221 11111000 00000
Q ss_pred cccc--CCCCc----HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006922 554 VELL--RYPNI----EEEMVEMLQIAMSCVVRMPDQRPKMPDVVR 592 (625)
Q Consensus 554 ~~~~--~~~~~----~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 592 (625)
.... ..... .....++.+++.+|++.||++|||+.|+++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 256 RTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp CCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred cccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 0000 00000 011245678888999999999999999986
No 55
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=8.5e-41 Score=351.65 Aligned_cols=268 Identities=17% Similarity=0.181 Sum_probs=201.4
Q ss_pred hHcccCCceeEEEEEEcC------CcEEEEEEeccccCC------------hHHHHHHHHHHHcCCCCceecceeEEEec
Q 006922 330 EVLGKGTFGMAYKAILED------GTTVVVKRLKDVNVG------------KRDFEQQMEIVGSIRHENVVELKAYYYSK 391 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~~------g~~vavK~l~~~~~~------------~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 391 (625)
+.||+|+||+||+|.... ++.||||++...... ...+..|+..+..++||||+++++++...
T Consensus 41 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~ 120 (364)
T 3op5_A 41 LPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSGLHD 120 (364)
T ss_dssp EECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEEEEEEEE
T ss_pred EEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEEeeeeec
Confidence 579999999999998754 478999998754211 11233455567778899999999999775
Q ss_pred ----CceEEEEEeccCCChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeC--CCCC
Q 006922 392 ----DEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLN--SQQY 465 (625)
Q Consensus 392 ----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~--~~~~ 465 (625)
...++||||+ +++|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++ .++.
T Consensus 121 ~~~~~~~~lv~e~~-g~~L~~~~~~~~----~~l~~~~~~~i~~qi~~~l~~lH~~~---iiHrDlkp~Nill~~~~~~~ 192 (364)
T 3op5_A 121 KNGKSYRFMIMDRF-GSDLQKIYEANA----KRFSRKTVLQLSLRILDILEYIHEHE---YVHGDIKASNLLLNYKNPDQ 192 (364)
T ss_dssp ETTEEEEEEEEECE-EEEHHHHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEESSCTTC
T ss_pred cCCcceEEEEEeCC-CCCHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEEecCCHHHEEEecCCCCe
Confidence 3479999999 999999997642 24999999999999999999999998 99999999999999 8899
Q ss_pred eeEecccccccccccc----------cccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhH
Q 006922 466 GCVSDLGLTTITSALA----------PVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHL 535 (625)
Q Consensus 466 ~kl~DfGla~~~~~~~----------~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~ 535 (625)
+||+|||+++...... ....||..|+|||++.+..++.++|||||||++|||+||+.||.........
T Consensus 193 ~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~-- 270 (364)
T 3op5_A 193 VYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKY-- 270 (364)
T ss_dssp EEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHH--
T ss_pred EEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCHHH--
Confidence 9999999997654321 2234888999999999999999999999999999999999999864333221
Q ss_pred HHHHHHHhhcccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCCCCCCCCCCCCC
Q 006922 536 VRWVHSVVREEWTAEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPNDSENRPSSGNKS 612 (625)
Q Consensus 536 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~~~~~~~~~~~~ 612 (625)
.......... ...++.+..+.. . ....++.+++..||..+|.+||++.++++.|+++............+|.
T Consensus 271 ~~~~~~~~~~-~~~~~~~~~~~~-~---~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~~~~~~~~~dw~ 342 (364)
T 3op5_A 271 VRDSKIRYRE-NIASLMDKCFPA-A---NAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIGSKDDGKLDLS 342 (364)
T ss_dssp HHHHHHHHHH-CHHHHHHHHSCT-T---CCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCCCCCCCCC-
T ss_pred HHHHHHHhhh-hHHHHHHHhccc-c---cCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCCCcCCccceE
Confidence 1111111111 112222222111 1 1123677888899999999999999999999988776554444444554
No 56
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=8.1e-41 Score=344.76 Aligned_cols=237 Identities=19% Similarity=0.314 Sum_probs=198.9
Q ss_pred hHcccCCceeEEEEEEc-CCcEEEEEEecccc----CChHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccCC
Q 006922 330 EVLGKGTFGMAYKAILE-DGTTVVVKRLKDVN----VGKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLG 404 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 404 (625)
+.||+|+||+||+++.. +|+.||+|+++... ...+.+.+|+.++..++||||+++++++.+.+..++||||+++|
T Consensus 12 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~e~~~gg 91 (318)
T 1fot_A 12 RTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGG 91 (318)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEEeCCCCC
Confidence 57999999999999965 69999999997542 23456789999999999999999999999999999999999999
Q ss_pred ChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEeccccccccccccccc
Q 006922 405 SVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVI 484 (625)
Q Consensus 405 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~ 484 (625)
+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.........
T Consensus 92 ~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~~~~~ 163 (318)
T 1fot_A 92 ELFSLLRKSQ-----RFPNPVAKFYAAEVCLALEYLHSKD---IIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTL 163 (318)
T ss_dssp BHHHHHHHTS-----SCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECTTSCEEECCCSSCEECSSCBCCC
T ss_pred CHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChheEEEcCCCCEEEeecCcceecCCccccc
Confidence 9999997643 3899999999999999999999998 9999999999999999999999999999877666667
Q ss_pred ccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccccccccccCCCCcHH
Q 006922 485 ARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIEE 564 (625)
Q Consensus 485 ~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 564 (625)
.||..|+|||++.+..++.++||||+||++|||++|+.||......+... ....... ..+ ..
T Consensus 164 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~------~i~~~~~----------~~p--~~ 225 (318)
T 1fot_A 164 CGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYE------KILNAEL----------RFP--PF 225 (318)
T ss_dssp CSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH------HHHHCCC----------CCC--TT
T ss_pred cCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHH------HHHhCCC----------CCC--CC
Confidence 89999999999999999999999999999999999999997643322211 1111110 011 11
Q ss_pred HHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 006922 565 EMVEMLQIAMSCVVRMPDQRP-----KMPDVVR 592 (625)
Q Consensus 565 ~~~~l~~l~~~Cl~~~P~~RP-----s~~ev~~ 592 (625)
...++.+++.+|+..||++|| +++|+++
T Consensus 226 ~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 226 FNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp SCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred CCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence 123566777899999999999 8888874
No 57
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=1.8e-40 Score=338.60 Aligned_cols=254 Identities=20% Similarity=0.315 Sum_probs=201.7
Q ss_pred hHcccCCceeEEEEEEc-CCcEEEEEEeccccCC----hHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccCC
Q 006922 330 EVLGKGTFGMAYKAILE-DGTTVVVKRLKDVNVG----KRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLG 404 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~----~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 404 (625)
+.||+|+||+||+|... +++.||+|++...... .+.+.+|++++.+++||||+++++++...+..++||||++++
T Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g~ 96 (294)
T 4eqm_A 17 DKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGP 96 (294)
T ss_dssp EEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEEECCCSC
T ss_pred EEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEEeCCCCC
Confidence 56999999999999954 6899999998654322 256889999999999999999999999999999999999999
Q ss_pred ChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEeccccccccccc----
Q 006922 405 SVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSAL---- 480 (625)
Q Consensus 405 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~---- 480 (625)
+|.+++.... ++++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 97 ~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 168 (294)
T 4eqm_A 97 TLSEYIESHG-----PLSVDTAINFTNQILDGIKHAHDMR---IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQ 168 (294)
T ss_dssp BHHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCSSSTTC-------
T ss_pred CHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEEeCCCccccccccccc
Confidence 9999997653 4899999999999999999999998 999999999999999999999999999876432
Q ss_pred ccccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccccccccccCCC
Q 006922 481 APVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYP 560 (625)
Q Consensus 481 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 560 (625)
.....||..|+|||.+.+..++.++||||+|+++|||+||+.||......+.. .. ...... ... .....+
T Consensus 169 ~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~--~~----~~~~~~-~~~---~~~~~~ 238 (294)
T 4eqm_A 169 TNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIA--IK----HIQDSV-PNV---TTDVRK 238 (294)
T ss_dssp ------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHH--HH----HHSSCC-CCH---HHHSCT
T ss_pred cCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHH--HH----HhhccC-CCc---chhccc
Confidence 22345889999999999999999999999999999999999999764422211 11 111110 000 000001
Q ss_pred CcHHHHHHHHHHHHHccCCCCCCCC-CHHHHHHHHHhhCCCCCCC
Q 006922 561 NIEEEMVEMLQIAMSCVVRMPDQRP-KMPDVVRVIENVRPNDSEN 604 (625)
Q Consensus 561 ~~~~~~~~l~~l~~~Cl~~~P~~RP-s~~ev~~~L~~~~~~~~~~ 604 (625)
.....+.+++.+|++.||.+|| +++++.+.|+.+..+...+
T Consensus 239 ---~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~~~~ 280 (294)
T 4eqm_A 239 ---DIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHENRAN 280 (294)
T ss_dssp ---TSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSSSTT
T ss_pred ---CCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhhccCC
Confidence 1224577788899999999998 9999999999987765443
No 58
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=1.6e-40 Score=337.46 Aligned_cols=247 Identities=25% Similarity=0.438 Sum_probs=198.5
Q ss_pred hHcccCCceeEEEEEE-cCCcEEEEEEeccccCCh--------HHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEe
Q 006922 330 EVLGKGTFGMAYKAIL-EDGTTVVVKRLKDVNVGK--------RDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDY 400 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~--------~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 400 (625)
+.||+|+||+||+|.. .+++.||+|++....... +.+.+|++++.+++||||+++++++.+.. ++||||
T Consensus 25 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~lv~e~ 102 (287)
T 4f0f_A 25 KQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP--RMVMEF 102 (287)
T ss_dssp EECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--EEEEEC
T ss_pred hccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--eEEEEe
Confidence 5699999999999996 478999999997543211 56889999999999999999999986544 799999
Q ss_pred ccCCChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCC-----eeEecccccc
Q 006922 401 YSLGSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQY-----GCVSDLGLTT 475 (625)
Q Consensus 401 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~-----~kl~DfGla~ 475 (625)
+++|+|.+.+.... ..+++..+..++.|++.||+|||+.+ ++|+||||||+||+++.++. +||+|||+++
T Consensus 103 ~~~~~L~~~l~~~~----~~~~~~~~~~~~~~l~~~l~~lH~~~-~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~~~ 177 (287)
T 4f0f_A 103 VPCGDLYHRLLDKA----HPIKWSVKLRLMLDIALGIEYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ 177 (287)
T ss_dssp CTTCBHHHHHHCTT----SCCCHHHHHHHHHHHHHHHHHHHTSS-SCCBCSCCSGGGEEESCCCTTCSCCEEECCCTTCB
T ss_pred cCCCCHHHHHhccc----CCccHHHHHHHHHHHHHHHHHHHhCC-CCeecCCCCcceEEEeccCCCCceeEEeCCCCccc
Confidence 99999998887543 25899999999999999999999875 34999999999999988876 9999999998
Q ss_pred cccccccccccCCCcCCcccc--CCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhccccccccc
Q 006922 476 ITSALAPVIARAAGYRAPEVT--DSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFD 553 (625)
Q Consensus 476 ~~~~~~~~~~~~~~y~aPE~~--~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 553 (625)
..........++..|+|||.+ ....++.++|||||||++|||++|+.||......+... .... .......
T Consensus 178 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~-~~~~---~~~~~~~---- 249 (287)
T 4f0f_A 178 QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKF-INMI---REEGLRP---- 249 (287)
T ss_dssp CCSSCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHH-HHHH---HHSCCCC----
T ss_pred cccccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHH-HHHH---hccCCCC----
Confidence 776665666789999999998 34567899999999999999999999998655433221 1111 1111100
Q ss_pred ccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhh
Q 006922 554 VELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENV 597 (625)
Q Consensus 554 ~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~ 597 (625)
........++.+++.+||+.||.+|||+.|+++.|+++
T Consensus 250 ------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 250 ------TIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp ------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred ------CCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 11112234677888899999999999999999999864
No 59
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=8.7e-41 Score=346.11 Aligned_cols=242 Identities=22% Similarity=0.344 Sum_probs=197.3
Q ss_pred HhHcccCCceeEEEEEEc-CCcEEEEEEeccccC-------ChHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEe
Q 006922 329 AEVLGKGTFGMAYKAILE-DGTTVVVKRLKDVNV-------GKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDY 400 (625)
Q Consensus 329 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 400 (625)
.+.||+|+||+||++... +|+.||+|+++.... ..+.+.+|++++.+++||||+++++++...+..++||||
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 95 (326)
T 2y0a_A 16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILEL 95 (326)
T ss_dssp EEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred ceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEEc
Confidence 467999999999999965 689999999975432 246789999999999999999999999999999999999
Q ss_pred ccCCChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCC----CeeEeccccccc
Q 006922 401 YSLGSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQ----YGCVSDLGLTTI 476 (625)
Q Consensus 401 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~----~~kl~DfGla~~ 476 (625)
+++|+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++ .+||+|||+++.
T Consensus 96 ~~~~~L~~~l~~~~-----~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~ 167 (326)
T 2y0a_A 96 VAGGELFDFLAEKE-----SLTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167 (326)
T ss_dssp CCSCBHHHHHTTSS-----CCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESCSSSSSCCEEECCCTTCEE
T ss_pred CCCCCHHHHHHhcC-----CcCHHHHHHHHHHHHHHHHHHHHCC---eEcCCCCHHHEEEecCCCCCCCEEEEECCCCeE
Confidence 99999999997532 4899999999999999999999998 99999999999999887 799999999987
Q ss_pred cccc--ccccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccccccc
Q 006922 477 TSAL--APVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDV 554 (625)
Q Consensus 477 ~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 554 (625)
.... .....+|..|+|||++.+..++.++|||||||++|||++|+.||......+....+. . ... . +..
T Consensus 168 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~---~---~~~--~-~~~ 238 (326)
T 2y0a_A 168 IDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVS---A---VNY--E-FED 238 (326)
T ss_dssp CCTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHH---H---TCC--C-CCH
T ss_pred CCCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHH---h---cCC--C-cCc
Confidence 6432 234568899999999999999999999999999999999999997644322221111 1 000 0 000
Q ss_pred cccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006922 555 ELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR 592 (625)
Q Consensus 555 ~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 592 (625)
... + .....+.+++.+||..||++|||+.|+++
T Consensus 239 ~~~--~---~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 239 EYF--S---NTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271 (326)
T ss_dssp HHH--T---TSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred ccc--c---cCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 000 0 11235677888999999999999999986
No 60
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=1.2e-40 Score=349.32 Aligned_cols=241 Identities=20% Similarity=0.319 Sum_probs=197.0
Q ss_pred hHcccCCceeEEEEEEc-CCcEEEEEEeccccC-------ChHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEec
Q 006922 330 EVLGKGTFGMAYKAILE-DGTTVVVKRLKDVNV-------GKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYY 401 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 401 (625)
+.||+|+||+||++... +|+.||+|+++.... ..+.+.+|++++.+++||||+++++++.+.+..++||||+
T Consensus 18 ~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~e~~ 97 (361)
T 2yab_A 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELV 97 (361)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred eEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEEEEEEEcC
Confidence 56999999999999965 699999999976432 2367899999999999999999999999999999999999
Q ss_pred cCCChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCC----CeeEecccccccc
Q 006922 402 SLGSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQ----YGCVSDLGLTTIT 477 (625)
Q Consensus 402 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~----~~kl~DfGla~~~ 477 (625)
++|+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++ .+||+|||+++..
T Consensus 98 ~gg~L~~~l~~~~-----~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~ 169 (361)
T 2yab_A 98 SGGELFDFLAQKE-----SLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI 169 (361)
T ss_dssp CSCBHHHHHTTCS-----CCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCTTSSSCCEEECCCSSCEEC
T ss_pred CCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEeCCCCCccCEEEEecCCceEc
Confidence 9999999997532 4899999999999999999999998 99999999999998877 7999999999876
Q ss_pred ccc--ccccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhccccccccccc
Q 006922 478 SAL--APVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVE 555 (625)
Q Consensus 478 ~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 555 (625)
... .....||+.|+|||++.+..++.++|||||||++|||++|+.||.+....+....+ ..... -++..
T Consensus 170 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i------~~~~~---~~~~~ 240 (361)
T 2yab_A 170 EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANI------TAVSY---DFDEE 240 (361)
T ss_dssp CTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHH------HTTCC---CCCHH
T ss_pred CCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH------HhcCC---CCCch
Confidence 543 23456899999999999999999999999999999999999999765433222111 11100 00100
Q ss_pred ccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006922 556 LLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR 592 (625)
Q Consensus 556 ~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 592 (625)
.. +. ...++.+++.+|+..||.+|||+.|+++
T Consensus 241 ~~--~~---~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 241 FF--SQ---TSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp HH--TT---SCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred hc--cC---CCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 00 11 1235667888999999999999999984
No 61
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=3.5e-41 Score=371.97 Aligned_cols=249 Identities=26% Similarity=0.399 Sum_probs=205.9
Q ss_pred HhHcccCCceeEEEEEEcCCcEEEEEEeccccCChHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccCCChhh
Q 006922 329 AEVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLGSVSA 408 (625)
Q Consensus 329 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~ 408 (625)
.+.||+|+||+||+|...++..||||+++......++|.+|+++|.+++||||+++++++.+ +..++||||+++|+|.+
T Consensus 272 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~~~gsL~~ 350 (535)
T 2h8h_A 272 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLD 350 (535)
T ss_dssp EEEEEECSSEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTEEHHH
T ss_pred heecccCCCeEEEEEEECCCceEEEEEeCCCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehhcCCcHHH
Confidence 35799999999999999888899999998776667889999999999999999999999876 67899999999999999
Q ss_pred hhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEecccccccccccc----ccc
Q 006922 409 MLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALA----PVI 484 (625)
Q Consensus 409 ~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~----~~~ 484 (625)
++..... ..+++..+..++.|+++||+|||+++ |+||||||+|||++.++.+||+|||+++...... ...
T Consensus 351 ~l~~~~~---~~l~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~ 424 (535)
T 2h8h_A 351 FLKGETG---KYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA 424 (535)
T ss_dssp HHSHHHH---TTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHTTCST
T ss_pred HHhhcCC---CCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHhhEEEcCCCcEEEcccccceecCCCceecccCC
Confidence 9975421 23899999999999999999999998 9999999999999999999999999998764321 122
Q ss_pred ccCCCcCCccccCCCCCCCccchhhhHHHHHHHHh-CCCCCCCCCCcchhhHHHHHHHHhhcccccccccccccCCCCcH
Q 006922 485 ARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIE 563 (625)
Q Consensus 485 ~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 563 (625)
.++..|+|||++....++.++|||||||++|||+| |+.||......+....+ . .+. +.+...
T Consensus 425 ~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i---~----~~~----------~~~~~~ 487 (535)
T 2h8h_A 425 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV---E----RGY----------RMPCPP 487 (535)
T ss_dssp TSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHH---H----TTC----------CCCCCT
T ss_pred cCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH---H----cCC----------CCCCCC
Confidence 34567999999988899999999999999999999 99999765433322211 1 110 011112
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCC
Q 006922 564 EEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPND 601 (625)
Q Consensus 564 ~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~ 601 (625)
....++.+++.+||+.||++|||+.+|++.|+.+....
T Consensus 488 ~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~ 525 (535)
T 2h8h_A 488 ECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST 525 (535)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCCC
T ss_pred CCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhcc
Confidence 23346778889999999999999999999999886543
No 62
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=3.4e-41 Score=343.89 Aligned_cols=254 Identities=26% Similarity=0.410 Sum_probs=197.4
Q ss_pred hHcccCCceeEEEEEE-----cCCcEEEEEEeccccCC-hHHHHHHHHHHHcCCCCceecceeEEEec--CceEEEEEec
Q 006922 330 EVLGKGTFGMAYKAIL-----EDGTTVVVKRLKDVNVG-KRDFEQQMEIVGSIRHENVVELKAYYYSK--DEKLMVYDYY 401 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~-----~~g~~vavK~l~~~~~~-~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv~e~~ 401 (625)
+.||+|+||+||+|+. .+++.||||++...... .+.+.+|++++.+++||||+++++++... ...++||||+
T Consensus 16 ~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~ 95 (295)
T 3ugc_A 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 95 (295)
T ss_dssp EEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCEEEEECC
T ss_pred heeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceEEEEEeC
Confidence 5799999999999984 36889999999864322 36789999999999999999999998654 4689999999
Q ss_pred cCCChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEecccccccccccc
Q 006922 402 SLGSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALA 481 (625)
Q Consensus 402 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~ 481 (625)
++|+|.+++..... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 96 ~~~~L~~~l~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 168 (295)
T 3ugc_A 96 PYGSLRDYLQKHKE----RIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDK 168 (295)
T ss_dssp TTCBHHHHHHHCGG----GCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCCSCC------
T ss_pred CCCCHHHHHHhccc----ccCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHhhEEEcCCCeEEEccCcccccccCCc
Confidence 99999999976532 4899999999999999999999998 9999999999999999999999999998764321
Q ss_pred ------cccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCc---------chhhHHHHHHHHhhcc
Q 006922 482 ------PVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGD---------ELVHLVRWVHSVVREE 546 (625)
Q Consensus 482 ------~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~---------~~~~~~~~~~~~~~~~ 546 (625)
....++..|+|||.+.+..++.++||||||+++|||+||..|+...... ........+...+...
T Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (295)
T 3ugc_A 169 EFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNN 248 (295)
T ss_dssp -------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHHTT
T ss_pred ceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHHhcc
Confidence 1223455699999999889999999999999999999999998642110 0000011111111111
Q ss_pred cccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCC
Q 006922 547 WTAEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPN 600 (625)
Q Consensus 547 ~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~ 600 (625)
. ..+.......++.+++.+||+.||++|||+.|+++.|++++.+
T Consensus 249 ~----------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~ 292 (295)
T 3ugc_A 249 G----------RLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 292 (295)
T ss_dssp C----------CCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred C----------cCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHh
Confidence 0 1111222335677888899999999999999999999998654
No 63
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.1e-40 Score=340.84 Aligned_cols=238 Identities=21% Similarity=0.333 Sum_probs=187.0
Q ss_pred hHcccCCceeEEEEEE-cCCcEEEEEEeccccC---------------------------ChHHHHHHHHHHHcCCCCce
Q 006922 330 EVLGKGTFGMAYKAIL-EDGTTVVVKRLKDVNV---------------------------GKRDFEQQMEIVGSIRHENV 381 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~---------------------------~~~~~~~e~~~l~~l~h~ni 381 (625)
+.||+|+||+||+|.. .+|+.||||++..... ..+.+.+|++++.+++||||
T Consensus 19 ~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i 98 (298)
T 2zv2_A 19 DEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKLDHPNV 98 (298)
T ss_dssp EEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHTCCCTTB
T ss_pred eEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHhCCCCCC
Confidence 5699999999999995 4689999999975421 12458899999999999999
Q ss_pred ecceeEEEe--cCceEEEEEeccCCChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEE
Q 006922 382 VELKAYYYS--KDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIF 459 (625)
Q Consensus 382 v~l~~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIl 459 (625)
+++++++.+ .+..++||||+++++|.+++... .+++..+..++.|+++||+|||+.+ |+||||||+|||
T Consensus 99 v~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nil 169 (298)
T 2zv2_A 99 VKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLK------PLSEDQARFYFQDLIKGIEYLHYQK---IIHRDIKPSNLL 169 (298)
T ss_dssp CCEEEEEECSSSSEEEEEEECCTTCBSCCSSCSS------CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEE
T ss_pred CeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhcC------CCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEE
Confidence 999999987 56789999999999998875432 4899999999999999999999998 999999999999
Q ss_pred eCCCCCeeEecccccccccccc---cccccCCCcCCccccCCCC---CCCccchhhhHHHHHHHHhCCCCCCCCCCcchh
Q 006922 460 LNSQQYGCVSDLGLTTITSALA---PVIARAAGYRAPEVTDSRK---ATQASDVYSFGVVLLEILTGKSPIHTTGGDELV 533 (625)
Q Consensus 460 l~~~~~~kl~DfGla~~~~~~~---~~~~~~~~y~aPE~~~~~~---~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~ 533 (625)
++.++.+||+|||+++...... ....+|..|+|||.+.+.. ++.++|||||||++|||++|+.||......+
T Consensus 170 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~-- 247 (298)
T 2zv2_A 170 VGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMC-- 247 (298)
T ss_dssp ECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHHH--
T ss_pred ECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHHH--
Confidence 9999999999999998764322 2346888999999997665 3788999999999999999999997543211
Q ss_pred hHHHHHHHHhhcccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006922 534 HLVRWVHSVVREEWTAEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR 592 (625)
Q Consensus 534 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 592 (625)
....+ ..... ..+.......++.+++.+||+.||++|||+.|+++
T Consensus 248 -~~~~~----~~~~~---------~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 248 -LHSKI----KSQAL---------EFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp -HHHHH----HHCCC---------CCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred -HHHHH----hcccC---------CCCCccccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence 11111 11100 00111112235677888999999999999999874
No 64
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=1e-40 Score=348.54 Aligned_cols=237 Identities=18% Similarity=0.257 Sum_probs=199.2
Q ss_pred hHcccCCceeEEEEEEc-CCcEEEEEEecccc----CChHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccCC
Q 006922 330 EVLGKGTFGMAYKAILE-DGTTVVVKRLKDVN----VGKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLG 404 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 404 (625)
+.||+|+||+||+++.. +|+.||+|+++... ...+.+.+|++++..++||||+++++++.+.+..++||||+++|
T Consensus 47 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~gg 126 (350)
T 1rdq_E 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGG 126 (350)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTC
T ss_pred EEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEcCCCCC
Confidence 56999999999999965 69999999997542 23467889999999999999999999999999999999999999
Q ss_pred ChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEeccccccccccccccc
Q 006922 405 SVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVI 484 (625)
Q Consensus 405 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~ 484 (625)
+|.+++.... .+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++.........
T Consensus 127 ~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~~~~~ 198 (350)
T 1rdq_E 127 EMFSHLRRIG-----RFSEPHARFYAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTL 198 (350)
T ss_dssp BHHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECSSCBCCC
T ss_pred cHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---cccccCccceEEECCCCCEEEcccccceeccCCcccc
Confidence 9999998643 3899999999999999999999998 9999999999999999999999999999877666667
Q ss_pred ccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccccccccccCCCCcHH
Q 006922 485 ARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIEE 564 (625)
Q Consensus 485 ~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 564 (625)
.||..|+|||++.+..++.++|||||||++|||++|+.||......+.... ...... ..+ ..
T Consensus 199 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~------i~~~~~----------~~p--~~ 260 (350)
T 1rdq_E 199 CGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK------IVSGKV----------RFP--SH 260 (350)
T ss_dssp EECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH------HHHCCC----------CCC--TT
T ss_pred cCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHH------HHcCCC----------CCC--CC
Confidence 899999999999999999999999999999999999999976543222211 111110 001 11
Q ss_pred HHHHHHHHHHHccCCCCCCCCC-----HHHHHH
Q 006922 565 EMVEMLQIAMSCVVRMPDQRPK-----MPDVVR 592 (625)
Q Consensus 565 ~~~~l~~l~~~Cl~~~P~~RPs-----~~ev~~ 592 (625)
...++.+++.+||+.||.+||+ ++|+++
T Consensus 261 ~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 261 FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp CCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred CCHHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence 2235677888999999999998 888874
No 65
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=5.2e-41 Score=347.15 Aligned_cols=254 Identities=24% Similarity=0.353 Sum_probs=192.1
Q ss_pred HhHcccCCceeEEEEEEcC-C---cEEEEEEeccccC---ChHHHHHHHHHHHcCCCCceecceeEEEecCce------E
Q 006922 329 AEVLGKGTFGMAYKAILED-G---TTVVVKRLKDVNV---GKRDFEQQMEIVGSIRHENVVELKAYYYSKDEK------L 395 (625)
Q Consensus 329 ~~~lg~G~~g~Vy~~~~~~-g---~~vavK~l~~~~~---~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~------~ 395 (625)
.+.||+|+||+||+|.... + ..||||+++.... ..+.+.+|++++.+++||||+++++++...+.. +
T Consensus 28 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 107 (323)
T 3qup_A 28 GRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPM 107 (323)
T ss_dssp EEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-------CEE
T ss_pred eceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccccCCCccE
Confidence 3679999999999999543 3 2799999976432 236789999999999999999999999887655 9
Q ss_pred EEEEeccCCChhhhhccccCC-CCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEeccccc
Q 006922 396 MVYDYYSLGSVSAMLHSERGE-GRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLT 474 (625)
Q Consensus 396 lv~e~~~~g~L~~~l~~~~~~-~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla 474 (625)
+||||+++|+|.+++...... ....+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++
T Consensus 108 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~---ivH~Dikp~NIli~~~~~~kl~Dfg~a 184 (323)
T 3qup_A 108 VILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRN---FIHRDLAARNCMLAEDMTVCVADFGLS 184 (323)
T ss_dssp EEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTSCEEECCCCC-
T ss_pred EEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCC---cccCCCCcceEEEcCCCCEEEeecccc
Confidence 999999999999999765422 2235899999999999999999999998 999999999999999999999999999
Q ss_pred ccccccc-----cccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHh-CCCCCCCCCCcchhhHHHHHHHHhhcccc
Q 006922 475 TITSALA-----PVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWT 548 (625)
Q Consensus 475 ~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 548 (625)
+...... ....++..|+|||.+.+..++.++|||||||++|||++ |+.||......+....+. ....
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~------~~~~- 257 (323)
T 3qup_A 185 RKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLI------GGNR- 257 (323)
T ss_dssp ----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHH------TTCC-
T ss_pred ccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHHHHHHh------cCCC-
Confidence 8754322 12235567999999998899999999999999999999 999998765444332211 1110
Q ss_pred cccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCCC
Q 006922 549 AEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPNDS 602 (625)
Q Consensus 549 ~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~~ 602 (625)
.+.......++.+++.+||+.||++|||+.|+++.|+++.....
T Consensus 258 ----------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~ 301 (323)
T 3qup_A 258 ----------LKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLS 301 (323)
T ss_dssp ----------CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC--
T ss_pred ----------CCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhh
Confidence 01111223467788889999999999999999999999977643
No 66
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=5.6e-40 Score=338.92 Aligned_cols=264 Identities=15% Similarity=0.219 Sum_probs=205.7
Q ss_pred hHcccCCceeEEEEEEc-CCcEEEEEEecccc--CChHHHHHHHHHHHcCCCCceecceeEEEecC--ceEEEEEeccCC
Q 006922 330 EVLGKGTFGMAYKAILE-DGTTVVVKRLKDVN--VGKRDFEQQMEIVGSIRHENVVELKAYYYSKD--EKLMVYDYYSLG 404 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--~~~lv~e~~~~g 404 (625)
+.||+|+||+||+|... +|+.||||+++... ...+.+.+|++++.+++||||+++++++...+ ..++||||++++
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~ 94 (319)
T 4euu_A 15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCG 94 (319)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEECCTTC
T ss_pred EEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEEeCCCCC
Confidence 56999999999999965 58999999998643 23467889999999999999999999998765 679999999999
Q ss_pred ChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEe----CCCCCeeEeccccccccccc
Q 006922 405 SVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFL----NSQQYGCVSDLGLTTITSAL 480 (625)
Q Consensus 405 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll----~~~~~~kl~DfGla~~~~~~ 480 (625)
+|.+++..... ...+++..+..++.|++.||+|||+.+ |+||||||+|||+ +.++.+||+|||+++.....
T Consensus 95 ~L~~~l~~~~~--~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~~ 169 (319)
T 4euu_A 95 SLYTVLEEPSN--AYGLPESEFLIVLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD 169 (319)
T ss_dssp BHHHHHHSGGG--TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCTT
T ss_pred CHHHHHHHhcc--ccCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEEeccCCCCceEEEccCCCceecCCC
Confidence 99999986542 223899999999999999999999998 9999999999999 78888999999999876443
Q ss_pred c--cccccCCCcCCccccC--------CCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcc-hhhHHHHHHHHhhccccc
Q 006922 481 A--PVIARAAGYRAPEVTD--------SRKATQASDVYSFGVVLLEILTGKSPIHTTGGDE-LVHLVRWVHSVVREEWTA 549 (625)
Q Consensus 481 ~--~~~~~~~~y~aPE~~~--------~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~ 549 (625)
. ....++..|+|||++. +..++.++|||||||++|||+||+.||....... ....+..+..........
T Consensus 170 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~~~ 249 (319)
T 4euu_A 170 EQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAIS 249 (319)
T ss_dssp CCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCCTTCCE
T ss_pred CceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCCcccch
Confidence 2 2346888999999875 5788999999999999999999999997544322 222222221111111111
Q ss_pred cccc---------cccc-CCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhC
Q 006922 550 EVFD---------VELL-RYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVR 598 (625)
Q Consensus 550 ~~~d---------~~~~-~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~ 598 (625)
.+.+ .... ...........+.+++.+||+.||++|||++|+++...+..
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~ 308 (319)
T 4euu_A 250 GVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDIL 308 (319)
T ss_dssp EEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHT
T ss_pred hhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHh
Confidence 1100 0111 11223556667888999999999999999999999887654
No 67
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=2e-40 Score=340.37 Aligned_cols=251 Identities=27% Similarity=0.439 Sum_probs=196.4
Q ss_pred HhHcccCCceeEEEEEEcCCcEEEEEEeccccCC---hHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccCCC
Q 006922 329 AEVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVG---KRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLGS 405 (625)
Q Consensus 329 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 405 (625)
.+.||+|+||+||+|... ..+|+|+++..... .+.+.+|++++.+++||||+++++++. .+..++||||+++++
T Consensus 41 ~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e~~~~~~ 117 (307)
T 3lb7_A 41 STRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQWCEGSS 117 (307)
T ss_dssp EEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEECCSSCB
T ss_pred EeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEEecCCCCc
Confidence 357999999999999854 46999998865433 256889999999999999999999865 456899999999999
Q ss_pred hhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEecccccccccc-----c
Q 006922 406 VSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSA-----L 480 (625)
Q Consensus 406 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~-----~ 480 (625)
|.+++..... .+++.++..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.... .
T Consensus 118 L~~~l~~~~~----~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~~~~ 190 (307)
T 3lb7_A 118 LYKHLHVQET----KFQMFQLIDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQ 190 (307)
T ss_dssp HHHHHHTSCC----CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCSSSEEECTTSCEEECCCCSSCC---------
T ss_pred HHHHHHhccc----CCCHHHHHHHHHHHHHHHHHHHhCC---EeeCCCChhhEEEcCCCCEEEccCCCceeccccccccc
Confidence 9999975432 4899999999999999999999998 99999999999999999999999999975432 1
Q ss_pred ccccccCCCcCCccccC---CCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhccccccccccccc
Q 006922 481 APVIARAAGYRAPEVTD---SRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELL 557 (625)
Q Consensus 481 ~~~~~~~~~y~aPE~~~---~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 557 (625)
.....||..|+|||++. +..++.++|||||||++|||++|+.||......+.. ...+.. ... .+...
T Consensus 191 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~--~~~~~~----~~~----~~~~~ 260 (307)
T 3lb7_A 191 VEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQI--IFMVGR----GYA----SPDLS 260 (307)
T ss_dssp ---CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHH--HHHHHH----TCC----CCCST
T ss_pred ccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHHH--HHHHhc----CCC----Ccchh
Confidence 22346888999999985 567889999999999999999999999765443221 111111 100 11110
Q ss_pred CCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCC
Q 006922 558 RYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPND 601 (625)
Q Consensus 558 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~ 601 (625)
.. .......+.+++.+||+.+|++||++.|+++.|+.+....
T Consensus 261 ~~--~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~~ 302 (307)
T 3lb7_A 261 KL--YKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL 302 (307)
T ss_dssp TS--CSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred hh--hcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhhc
Confidence 00 1112346778888999999999999999999999887653
No 68
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=3.5e-41 Score=353.95 Aligned_cols=256 Identities=19% Similarity=0.260 Sum_probs=200.6
Q ss_pred hHcccCCceeEEEEEE-cCCcEEEEEEeccccCChHHHHHHHHHHHcCC-----CCceecceeEEEecCceEEEEEeccC
Q 006922 330 EVLGKGTFGMAYKAIL-EDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIR-----HENVVELKAYYYSKDEKLMVYDYYSL 403 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~-----h~niv~l~~~~~~~~~~~lv~e~~~~ 403 (625)
+.||+|+||+||+|.. .+++.||||+++......+.+..|++++.+++ ||||+++++++...+..++||||+ +
T Consensus 41 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~-~ 119 (360)
T 3llt_A 41 RKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCLIFEPL-G 119 (360)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECSCHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEEEEEECCC-C
T ss_pred EEEcccCCeEEEEEEECCCCeEEEEEEeccchhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCeeEEEEcCC-C
Confidence 5799999999999996 46899999999865444567888999999886 999999999999999999999999 8
Q ss_pred CChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCC---------------------
Q 006922 404 GSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNS--------------------- 462 (625)
Q Consensus 404 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~--------------------- 462 (625)
++|.+++..... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.
T Consensus 120 ~~L~~~~~~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~ 193 (360)
T 3llt_A 120 PSLYEIITRNNY---NGFHIEDIKLYCIEILKALNYLRKMS---LTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQI 193 (360)
T ss_dssp CBHHHHHHHTTT---CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEEE
T ss_pred CCHHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCcccEEEccccccccccchhcccccccccc
Confidence 999999986542 24899999999999999999999998 999999999999976
Q ss_pred ----CCCeeEecccccccccccccccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHH
Q 006922 463 ----QQYGCVSDLGLTTITSALAPVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRW 538 (625)
Q Consensus 463 ----~~~~kl~DfGla~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~ 538 (625)
++.+||+|||+++..........+|..|+|||++.+..++.++|||||||++|||++|+.||......+....+..
T Consensus 194 ~~~~~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~ 273 (360)
T 3llt_A 194 YRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMMES 273 (360)
T ss_dssp EEESCCCEEECCCTTCEETTSCCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH
T ss_pred cccCCCCEEEEeccCceecCCCCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHH
Confidence 7899999999999876666666789999999999999999999999999999999999999976544333322221
Q ss_pred HHHHhhcccc--------cccccccc-----cCCCCcHH---------------HHHHHHHHHHHccCCCCCCCCCHHHH
Q 006922 539 VHSVVREEWT--------AEVFDVEL-----LRYPNIEE---------------EMVEMLQIAMSCVVRMPDQRPKMPDV 590 (625)
Q Consensus 539 ~~~~~~~~~~--------~~~~d~~~-----~~~~~~~~---------------~~~~l~~l~~~Cl~~~P~~RPs~~ev 590 (625)
.......... ...++... ........ ....+.+++.+||+.||++|||+.|+
T Consensus 274 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpta~el 353 (360)
T 3llt_A 274 IIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAEL 353 (360)
T ss_dssp HTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSCCHHHH
T ss_pred hcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhcCChhhCCCHHHH
Confidence 1100000000 00000000 00000000 01456789999999999999999999
Q ss_pred HH
Q 006922 591 VR 592 (625)
Q Consensus 591 ~~ 592 (625)
++
T Consensus 354 L~ 355 (360)
T 3llt_A 354 LK 355 (360)
T ss_dssp TT
T ss_pred hc
Confidence 75
No 69
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=1.4e-40 Score=338.36 Aligned_cols=252 Identities=19% Similarity=0.302 Sum_probs=193.1
Q ss_pred hHcccCCceeEEEEEEcCCcEEEEEEeccccC---ChHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccCCCh
Q 006922 330 EVLGKGTFGMAYKAILEDGTTVVVKRLKDVNV---GKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLGSV 406 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~---~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 406 (625)
+.||+|+||+||+|...+|+.||+|+++.... ..+.+.+|++++.+++||||+++++++...+..++||||+++ +|
T Consensus 8 ~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l 86 (288)
T 1ob3_A 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ-DL 86 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCSE-EH
T ss_pred hhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEecCC-CH
Confidence 56999999999999988899999999975432 236788999999999999999999999999999999999986 88
Q ss_pred hhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEeccccccccccc---ccc
Q 006922 407 SAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSAL---APV 483 (625)
Q Consensus 407 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~---~~~ 483 (625)
.+++..... .+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++..... ...
T Consensus 87 ~~~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 159 (288)
T 1ob3_A 87 KKLLDVCEG----GLESVTAKSFLLQLLNGIAYCHDRR---VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTH 159 (288)
T ss_dssp HHHHHTSTT----CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-------
T ss_pred HHHHHhccc----CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEEeECccccccCcccccccc
Confidence 888875432 4899999999999999999999998 999999999999999999999999999875422 223
Q ss_pred cccCCCcCCccccCC-CCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhccc---ccc-----cccc
Q 006922 484 IARAAGYRAPEVTDS-RKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEW---TAE-----VFDV 554 (625)
Q Consensus 484 ~~~~~~y~aPE~~~~-~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~-----~~d~ 554 (625)
..+|..|+|||++.+ ..++.++||||+||++|||++|+.||......+.. ..+........ ... .+++
T Consensus 160 ~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (288)
T 1ob3_A 160 EIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQL---MRIFRILGTPNSKNWPNVTELPKYDP 236 (288)
T ss_dssp --CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH---HHHHHHHCCCCTTTSTTGGGSTTCCT
T ss_pred ccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH---HHHHHHHCCCChhhchhhhccccccc
Confidence 467888999999865 45899999999999999999999999765432221 11111111100 000 0111
Q ss_pred cccCCC------CcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006922 555 ELLRYP------NIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR 592 (625)
Q Consensus 555 ~~~~~~------~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 592 (625)
...... .......++.+++.+|++.||++|||+.|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 237 NFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp TCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 110000 00112245677888999999999999999975
No 70
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=2e-40 Score=342.92 Aligned_cols=241 Identities=21% Similarity=0.325 Sum_probs=194.0
Q ss_pred hHcccCCceeEEEEEEc-CCcEEEEEEeccccC--ChHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccCCCh
Q 006922 330 EVLGKGTFGMAYKAILE-DGTTVVVKRLKDVNV--GKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLGSV 406 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 406 (625)
+.||+|+||+||+|... +++.||||++..... ..+.+.+|+.++..++||||+++++++.+.+..++||||+++|+|
T Consensus 13 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~~~~L 92 (323)
T 3tki_A 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL 92 (323)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCTTEEG
T ss_pred eEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEcCCCCcH
Confidence 57999999999999965 789999999975432 236789999999999999999999999999999999999999999
Q ss_pred hhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEeccccccccccc-----c
Q 006922 407 SAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSAL-----A 481 (625)
Q Consensus 407 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~-----~ 481 (625)
.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++..... .
T Consensus 93 ~~~l~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~ 164 (323)
T 3tki_A 93 FDRIEPDI-----GMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL 164 (323)
T ss_dssp GGGSBTTT-----BCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCB
T ss_pred HHHHhhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---ccccccchHHEEEeCCCCEEEEEeeccceeccCCccccc
Confidence 99997542 4899999999999999999999998 999999999999999999999999999865321 2
Q ss_pred cccccCCCcCCccccCCCCC-CCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccccccccccCCC
Q 006922 482 PVIARAAGYRAPEVTDSRKA-TQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYP 560 (625)
Q Consensus 482 ~~~~~~~~y~aPE~~~~~~~-~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 560 (625)
....||..|+|||++.+..+ +.++|||||||++|||++|+.||........ ....+.. .. . ..+
T Consensus 165 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-~~~~~~~----~~---~-------~~~ 229 (323)
T 3tki_A 165 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ-EYSDWKE----KK---T-------YLN 229 (323)
T ss_dssp CSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSH-HHHHHHT----TC---T-------TST
T ss_pred CCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHH-HHHHHhc----cc---c-------cCC
Confidence 24568889999999987765 7799999999999999999999976543221 1111111 00 0 001
Q ss_pred CcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006922 561 NIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRV 593 (625)
Q Consensus 561 ~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 593 (625)
.......++.+++.+||+.||++|||+.|+++.
T Consensus 230 ~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 230 PWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred ccccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 111223456778889999999999999999863
No 71
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.4e-40 Score=372.49 Aligned_cols=245 Identities=22% Similarity=0.356 Sum_probs=199.5
Q ss_pred HcccCCceeEEEEEEc---CCcEEEEEEecccc--CChHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccCCC
Q 006922 331 VLGKGTFGMAYKAILE---DGTTVVVKRLKDVN--VGKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLGS 405 (625)
Q Consensus 331 ~lg~G~~g~Vy~~~~~---~g~~vavK~l~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 405 (625)
.||+|+||+||+|... ++..||||+++... ...+++.+|++++.+++|||||+++++|.. +..++||||+++|+
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~ 421 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 421 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence 5999999999999853 46789999998653 245789999999999999999999999976 56899999999999
Q ss_pred hhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEeccccccccccccc---
Q 006922 406 VSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAP--- 482 (625)
Q Consensus 406 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~--- 482 (625)
|.+++.... ..+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++.......
T Consensus 422 L~~~l~~~~----~~l~~~~~~~i~~qi~~~L~~LH~~~---iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~ 494 (613)
T 2ozo_A 422 LHKFLVGKR----EEIPVSNVAELLHQVSMGMKYLEEKN---FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYT 494 (613)
T ss_dssp HHHHHTTCT----TTSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCSTTTTCC-------
T ss_pred HHHHHhhcc----CCCCHHHHHHHHHHHHHHHHHHHHCC---EEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceee
Confidence 999997543 24899999999999999999999998 99999999999999999999999999987643211
Q ss_pred ---ccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHh-CCCCCCCCCCcchhhHHHHHHHHhhcccccccccccccC
Q 006922 483 ---VIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLR 558 (625)
Q Consensus 483 ---~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 558 (625)
...++..|+|||++.+..++.++|||||||++|||+| |+.||......+....+. ... .
T Consensus 495 ~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~------~~~-----------~ 557 (613)
T 2ozo_A 495 ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIE------QGK-----------R 557 (613)
T ss_dssp -------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHHH------TTC-----------C
T ss_pred eccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH------cCC-----------C
Confidence 1224567999999998899999999999999999998 999998766544332221 110 0
Q ss_pred CCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCC
Q 006922 559 YPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPN 600 (625)
Q Consensus 559 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~ 600 (625)
.+.......++.+++..||..+|++||++.+|++.|+.+...
T Consensus 558 ~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~ 599 (613)
T 2ozo_A 558 MECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYS 599 (613)
T ss_dssp CCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred CCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHH
Confidence 111122335678889999999999999999999999887543
No 72
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=8.3e-41 Score=343.88 Aligned_cols=251 Identities=25% Similarity=0.373 Sum_probs=202.9
Q ss_pred HhHcccCCceeEEEEEE------cCCcEEEEEEeccccC--ChHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEe
Q 006922 329 AEVLGKGTFGMAYKAIL------EDGTTVVVKRLKDVNV--GKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDY 400 (625)
Q Consensus 329 ~~~lg~G~~g~Vy~~~~------~~g~~vavK~l~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 400 (625)
.+.||+|+||.||+|.. .+++.||||+++.... ..+.+.+|++++.+++||||+++++++...+..++||||
T Consensus 28 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 107 (314)
T 2ivs_A 28 GKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEY 107 (314)
T ss_dssp EEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred eeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCceEEEEee
Confidence 35699999999999985 2458899999976432 235688999999999999999999999999999999999
Q ss_pred ccCCChhhhhccccCC-------------------CCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeC
Q 006922 401 YSLGSVSAMLHSERGE-------------------GRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLN 461 (625)
Q Consensus 401 ~~~g~L~~~l~~~~~~-------------------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~ 461 (625)
+++|+|.+++...... ....+++..+..++.|+++||+|||+.+ |+||||||+||+++
T Consensus 108 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dikp~NIli~ 184 (314)
T 2ivs_A 108 AKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK---LVHRDLAARNILVA 184 (314)
T ss_dssp CTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEE
T ss_pred cCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCC---CcccccchheEEEc
Confidence 9999999999865421 1234899999999999999999999998 99999999999999
Q ss_pred CCCCeeEecccccccccccc-----cccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHh-CCCCCCCCCCcchhhH
Q 006922 462 SQQYGCVSDLGLTTITSALA-----PVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHL 535 (625)
Q Consensus 462 ~~~~~kl~DfGla~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~~~ 535 (625)
.++.+||+|||+++...... ....++..|+|||.+.+..++.++||||||+++|||+| |+.||......+....
T Consensus 185 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~ 264 (314)
T 2ivs_A 185 EGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNL 264 (314)
T ss_dssp TTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHH
T ss_pred CCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence 99999999999998664321 12245667999999988889999999999999999999 9999987654443322
Q ss_pred HHHHHHHhhcccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCC
Q 006922 536 VRWVHSVVREEWTAEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRP 599 (625)
Q Consensus 536 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~ 599 (625)
+. ..... +.......++.+++.+||+.||.+||++.|+++.|+++..
T Consensus 265 ~~-------~~~~~----------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~ 311 (314)
T 2ivs_A 265 LK-------TGHRM----------ERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMV 311 (314)
T ss_dssp HH-------TTCCC----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hh-------cCCcC----------CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 21 11000 0111223467788889999999999999999999998754
No 73
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=3.6e-40 Score=354.74 Aligned_cols=242 Identities=18% Similarity=0.291 Sum_probs=195.6
Q ss_pred HhHcccCCceeEEEEEE-cCCcEEEEEEeccccCC---hHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccCC
Q 006922 329 AEVLGKGTFGMAYKAIL-EDGTTVVVKRLKDVNVG---KRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLG 404 (625)
Q Consensus 329 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 404 (625)
.+.||+|+||+||++.. .+|+.||+|++...... .+.+.+|++++.+++||||+++++++.+.+..++||||+++|
T Consensus 16 ~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~E~~~gg 95 (444)
T 3soa_A 16 FEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGG 95 (444)
T ss_dssp EEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEECCCBCC
T ss_pred EEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEEEeCCCC
Confidence 35799999999999985 47899999999765432 356889999999999999999999999999999999999999
Q ss_pred ChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeC---CCCCeeEecccccccccccc
Q 006922 405 SVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLN---SQQYGCVSDLGLTTITSALA 481 (625)
Q Consensus 405 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~---~~~~~kl~DfGla~~~~~~~ 481 (625)
+|.+.+.... .+++..+..++.|++.||+|||+++ |+||||||+|||++ .++.+||+|||+++......
T Consensus 96 ~L~~~i~~~~-----~~~e~~~~~i~~qil~aL~~lH~~g---ivHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~ 167 (444)
T 3soa_A 96 ELFEDIVARE-----YYSEADASHCIQQILEAVLHCHQMG---VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ 167 (444)
T ss_dssp BHHHHHHHCS-----CCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTC
T ss_pred CHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEeccCCCCcEEEccCceeEEecCCC
Confidence 9999987643 3899999999999999999999998 99999999999998 46789999999998765432
Q ss_pred ---cccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccccccccccC
Q 006922 482 ---PVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLR 558 (625)
Q Consensus 482 ---~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 558 (625)
....||+.|+|||++.+..++.++||||+||++|||++|+.||......+....+ . ... .+.....
T Consensus 168 ~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i---~---~~~-----~~~~~~~ 236 (444)
T 3soa_A 168 QAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQI---K---AGA-----YDFPSPE 236 (444)
T ss_dssp CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH---H---HTC-----CCCCTTT
T ss_pred ceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHH---H---hCC-----CCCCccc
Confidence 2356889999999999999999999999999999999999999765433222211 1 111 0100011
Q ss_pred CCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006922 559 YPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR 592 (625)
Q Consensus 559 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 592 (625)
.+. ...++.+++.+|++.||++|||+.|+++
T Consensus 237 ~~~---~s~~~~~li~~~L~~dP~~Rpta~e~L~ 267 (444)
T 3soa_A 237 WDT---VTPEAKDLINKMLTINPSKRITAAEALK 267 (444)
T ss_dssp TTT---SCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred ccc---CCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 111 2235667888999999999999999986
No 74
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-40 Score=351.29 Aligned_cols=249 Identities=22% Similarity=0.340 Sum_probs=192.3
Q ss_pred hHcccCCceeEEEEEEc--CC--cEEEEEEeccccC--ChHHHHHHHHHHHcCCCCceecceeEEEe-cCceEEEEEecc
Q 006922 330 EVLGKGTFGMAYKAILE--DG--TTVVVKRLKDVNV--GKRDFEQQMEIVGSIRHENVVELKAYYYS-KDEKLMVYDYYS 402 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~--~g--~~vavK~l~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~~~lv~e~~~ 402 (625)
+.||+|+||+||+|... ++ ..||||.++.... ..+.+.+|++++.+++||||+++++++.. .+..++||||++
T Consensus 95 ~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~e~~~ 174 (373)
T 3c1x_A 95 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMK 174 (373)
T ss_dssp EEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEEECCT
T ss_pred cEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEEECCC
Confidence 56999999999999853 22 4689999875432 23678999999999999999999999765 457899999999
Q ss_pred CCChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEecccccccccccc-
Q 006922 403 LGSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALA- 481 (625)
Q Consensus 403 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~- 481 (625)
+|+|.+++..... .+++..+..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 175 ~g~L~~~l~~~~~----~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~ 247 (373)
T 3c1x_A 175 HGDLRNFIRNETH----NPTVKDLIGFGLQVAKGMKFLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF 247 (373)
T ss_dssp TCBHHHHHHCTTC----CCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCC-----------
T ss_pred CCCHHHHHhhccc----CCCHHHHHHHHHHHHHHHHHHHHCC---EecCccchheEEECCCCCEEEeecccccccccccc
Confidence 9999999975432 4789999999999999999999998 9999999999999999999999999998653221
Q ss_pred ------cccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHh-CCCCCCCCCCcchhhHHHHHHHHhhcccccccccc
Q 006922 482 ------PVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDV 554 (625)
Q Consensus 482 ------~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 554 (625)
....++..|+|||.+.+..++.++|||||||++|||+| |.+||......+....+. ... ..
T Consensus 248 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~------~~~---~~--- 315 (373)
T 3c1x_A 248 DSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL------QGR---RL--- 315 (373)
T ss_dssp ----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHH------TTC---CC---
T ss_pred ccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHH------cCC---CC---
Confidence 12345567999999998899999999999999999999 788887655444332211 110 00
Q ss_pred cccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCCC
Q 006922 555 ELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPNDS 602 (625)
Q Consensus 555 ~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~~ 602 (625)
.........+.+++.+||+.+|++||++.|+++.|+.+.....
T Consensus 316 -----~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~ 358 (373)
T 3c1x_A 316 -----LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 358 (373)
T ss_dssp -----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCC
T ss_pred -----CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcc
Confidence 0111123467788889999999999999999999999876544
No 75
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=4.5e-41 Score=352.85 Aligned_cols=252 Identities=27% Similarity=0.360 Sum_probs=200.3
Q ss_pred HhHcccCCceeEEEEEE------cCCcEEEEEEeccccCC--hHHHHHHHHHHHcC-CCCceecceeEEEecCc-eEEEE
Q 006922 329 AEVLGKGTFGMAYKAIL------EDGTTVVVKRLKDVNVG--KRDFEQQMEIVGSI-RHENVVELKAYYYSKDE-KLMVY 398 (625)
Q Consensus 329 ~~~lg~G~~g~Vy~~~~------~~g~~vavK~l~~~~~~--~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~-~~lv~ 398 (625)
.+.||+|+||+||+|.. .+++.||||+++..... .+.+.+|++++.++ +||||+++++++...+. .++||
T Consensus 27 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~~iv~ 106 (359)
T 3vhe_A 27 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIV 106 (359)
T ss_dssp EEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSCCEEEE
T ss_pred ceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCCceEEEE
Confidence 35799999999999973 24689999999864322 35689999999999 79999999999988654 89999
Q ss_pred EeccCCChhhhhccccCCC-------------------------------------------------------------
Q 006922 399 DYYSLGSVSAMLHSERGEG------------------------------------------------------------- 417 (625)
Q Consensus 399 e~~~~g~L~~~l~~~~~~~------------------------------------------------------------- 417 (625)
||+++|+|.+++.......
T Consensus 107 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (359)
T 3vhe_A 107 EFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLY 186 (359)
T ss_dssp ECCTTEEHHHHHHTTTTSBCSCC------------------------------------------------------CTT
T ss_pred EecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhcccccchh
Confidence 9999999999998654210
Q ss_pred CccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEeccccccccccc-----ccccccCCCcCC
Q 006922 418 RIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSAL-----APVIARAAGYRA 492 (625)
Q Consensus 418 ~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~-----~~~~~~~~~y~a 492 (625)
...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++..... .....+|..|+|
T Consensus 187 ~~~l~~~~~~~~~~ql~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~a 263 (359)
T 3vhe_A 187 KDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMA 263 (359)
T ss_dssp TTCBCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEECGGGCC
T ss_pred ccccCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCCCceeEC
Confidence 122899999999999999999999998 999999999999999999999999999865322 123356778999
Q ss_pred ccccCCCCCCCccchhhhHHHHHHHHh-CCCCCCCCCCcchhhHHHHHHHHhhcccccccccccccCCCCcHHHHHHHHH
Q 006922 493 PEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIEEEMVEMLQ 571 (625)
Q Consensus 493 PE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~ 571 (625)
||++.+..++.++|||||||++|||+| |+.||......+.. ...+. ..... +.......++.+
T Consensus 264 PE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~--~~~~~----~~~~~----------~~~~~~~~~l~~ 327 (359)
T 3vhe_A 264 PETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF--CRRLK----EGTRM----------RAPDYTTPEMYQ 327 (359)
T ss_dssp HHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHH--HHHHH----HTCCC----------CCCTTCCHHHHH
T ss_pred hhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHH--HHHHH----cCCCC----------CCCCCCCHHHHH
Confidence 999988899999999999999999999 99999775543321 11111 11000 011112235778
Q ss_pred HHHHccCCCCCCCCCHHHHHHHHHhhCC
Q 006922 572 IAMSCVVRMPDQRPKMPDVVRVIENVRP 599 (625)
Q Consensus 572 l~~~Cl~~~P~~RPs~~ev~~~L~~~~~ 599 (625)
++..||+.||.+|||+.|+++.|+++..
T Consensus 328 li~~~l~~dP~~Rps~~ell~~L~~~~~ 355 (359)
T 3vhe_A 328 TMLDCWHGEPSQRPTFSELVEHLGNLLQ 355 (359)
T ss_dssp HHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHccCChhhCCCHHHHHHHHHHHHH
Confidence 8889999999999999999999998754
No 76
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=4.9e-41 Score=351.31 Aligned_cols=237 Identities=22% Similarity=0.316 Sum_probs=192.4
Q ss_pred hHcccCCceeEEEEEEc-CCcEEEEEEecccc----CChHHHHHHHHHHHcC-CCCceecceeEEEecCceEEEEEeccC
Q 006922 330 EVLGKGTFGMAYKAILE-DGTTVVVKRLKDVN----VGKRDFEQQMEIVGSI-RHENVVELKAYYYSKDEKLMVYDYYSL 403 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~----~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 403 (625)
+.||+|+||+||+|+.. +|+.||||+++... ...+.+.+|.+++..+ +||||+++++++.+.+..++||||+++
T Consensus 29 ~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~g 108 (353)
T 3txo_A 29 RVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNG 108 (353)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCCS
T ss_pred EEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEEEEeCCCC
Confidence 57999999999999965 68999999997532 2335678899999988 699999999999999999999999999
Q ss_pred CChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEecccccccccc---c
Q 006922 404 GSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSA---L 480 (625)
Q Consensus 404 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~---~ 480 (625)
|+|..++.... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.... .
T Consensus 109 g~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~~~~ 180 (353)
T 3txo_A 109 GDLMFHIQKSR-----RFDEARARFYAAEIISALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVT 180 (353)
T ss_dssp CBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCSCC----
T ss_pred CcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---CcccCCCHHHEEECCCCCEEEccccceeecccCCcc
Confidence 99999997653 3899999999999999999999998 99999999999999999999999999986432 2
Q ss_pred ccccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccccccccccCCC
Q 006922 481 APVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYP 560 (625)
Q Consensus 481 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 560 (625)
.....||+.|+|||++.+..++.++||||+||++|||++|+.||......+....+ ..... ..+
T Consensus 181 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i------~~~~~----------~~p 244 (353)
T 3txo_A 181 TATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAI------LNDEV----------VYP 244 (353)
T ss_dssp -----CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH------HHCCC----------CCC
T ss_pred ccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHH------HcCCC----------CCC
Confidence 33457899999999999888999999999999999999999999765433322211 11110 011
Q ss_pred CcHHHHHHHHHHHHHccCCCCCCCCCH------HHHHH
Q 006922 561 NIEEEMVEMLQIAMSCVVRMPDQRPKM------PDVVR 592 (625)
Q Consensus 561 ~~~~~~~~l~~l~~~Cl~~~P~~RPs~------~ev~~ 592 (625)
.....++.+++.+|++.||.+||++ .|+++
T Consensus 245 --~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 245 --TWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp --TTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred --CCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 1122356677889999999999998 67764
No 77
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=1.6e-40 Score=333.99 Aligned_cols=247 Identities=21% Similarity=0.322 Sum_probs=199.5
Q ss_pred hHcccCCceeEEEEEEcCCcEEEEEEeccccCC---hHHHHHHHHHHHcCCCCceecceeEEEec--CceEEEEEeccCC
Q 006922 330 EVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVG---KRDFEQQMEIVGSIRHENVVELKAYYYSK--DEKLMVYDYYSLG 404 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv~e~~~~g 404 (625)
+.||+|+||+||+|... ++.||||+++..... .+.+.+|++++.+++||||+++++++... +..++||||+++|
T Consensus 16 ~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~ 94 (271)
T 3kmu_A 16 TKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYG 94 (271)
T ss_dssp EEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEEECCTTC
T ss_pred HHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeeecccCCC
Confidence 57999999999999985 899999999865433 35689999999999999999999999887 6789999999999
Q ss_pred ChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEeccccccccccccccc
Q 006922 405 SVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVI 484 (625)
Q Consensus 405 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~ 484 (625)
+|.+++.... ...+++..+..++.|++.||+|||+.+ ++|+||||||+||+++.++.++|+|||++..... ...
T Consensus 95 ~L~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~-~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~--~~~ 168 (271)
T 3kmu_A 95 SLYNVLHEGT---NFVVDQSQAVKFALDMARGMAFLHTLE-PLIPRHALNSRSVMIDEDMTARISMADVKFSFQS--PGR 168 (271)
T ss_dssp BHHHHHHSCS---SCCCCHHHHHHHHHHHHHHHHHHTTSS-SCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSC--TTC
T ss_pred cHHHHHhhcc---cCCCCHHHHHHHHHHHHHHHHHHhcCC-CceecCCCccceEEEcCCcceeEEeccceeeecc--cCc
Confidence 9999998643 235899999999999999999999864 3599999999999999999999999988765433 234
Q ss_pred ccCCCcCCccccCCCCCCC---ccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccccccccccCCCC
Q 006922 485 ARAAGYRAPEVTDSRKATQ---ASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPN 561 (625)
Q Consensus 485 ~~~~~y~aPE~~~~~~~~~---~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 561 (625)
.+|..|+|||.+.+..++. ++||||||+++|||++|+.||......+... ......... ..
T Consensus 169 ~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~------~~~~~~~~~----------~~ 232 (271)
T 3kmu_A 169 MYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGM------KVALEGLRP----------TI 232 (271)
T ss_dssp BSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHH------HHHHSCCCC----------CC
T ss_pred cCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHH------HHHhcCCCC----------CC
Confidence 6788999999998765554 8999999999999999999997654322211 111111100 01
Q ss_pred cHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCC
Q 006922 562 IEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRP 599 (625)
Q Consensus 562 ~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~ 599 (625)
......++.+++..||+.||++|||+.|+++.|+++..
T Consensus 233 ~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 233 PPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 11123457788889999999999999999999999875
No 78
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=1.1e-40 Score=338.70 Aligned_cols=248 Identities=21% Similarity=0.358 Sum_probs=206.3
Q ss_pred hHcccCCceeEEEEEEc-CCcEEEEEEeccccCChHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccCCChhh
Q 006922 330 EVLGKGTFGMAYKAILE-DGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLGSVSA 408 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~ 408 (625)
+.||+|+||+||+|... ++..||+|+++......+.+.+|++++.+++||||+++++++...+..++||||+++++|.+
T Consensus 19 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~ 98 (288)
T 3kfa_A 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD 98 (288)
T ss_dssp EESGGGTTCSEEEEEEGGGTEEEEEEEECSCSTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTEEHHH
T ss_pred eecCCCCceeEEEeEecCCCEEEEEEecCcCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEcCCCCcHHH
Confidence 56999999999999965 48899999998766666789999999999999999999999999999999999999999999
Q ss_pred hhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEecccccccccccc----ccc
Q 006922 409 MLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALA----PVI 484 (625)
Q Consensus 409 ~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~----~~~ 484 (625)
++..... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++....... ...
T Consensus 99 ~~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~ 172 (288)
T 3kfa_A 99 YLRECNR---QEVSAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 172 (288)
T ss_dssp HHHHCCT---TTSCHHHHHHHHHHHHHHHHHHHHHT---CCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSEEETTE
T ss_pred HHHhccc---CCccHhHHHHHHHHHHHHHHHHHHCC---ccCCCCCcceEEEcCCCCEEEccCccceeccCCccccccCC
Confidence 9976432 35899999999999999999999998 9999999999999999999999999998765332 123
Q ss_pred ccCCCcCCccccCCCCCCCccchhhhHHHHHHHHh-CCCCCCCCCCcchhhHHHHHHHHhhcccccccccccccCCCCcH
Q 006922 485 ARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIE 563 (625)
Q Consensus 485 ~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 563 (625)
.++..|+|||.+.+..++.++||||||+++|||++ |+.||......+....+. . .. ..+...
T Consensus 173 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~~---~----~~----------~~~~~~ 235 (288)
T 3kfa_A 173 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE---K----DY----------RMERPE 235 (288)
T ss_dssp EECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHH---T----TC----------CCCCCT
T ss_pred ccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHh---c----cC----------CCCCCC
Confidence 45667999999988899999999999999999999 999997755443332221 1 10 001111
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCC
Q 006922 564 EEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPN 600 (625)
Q Consensus 564 ~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~ 600 (625)
....++.+++.+|+..||.+|||+.|+++.|+.+..+
T Consensus 236 ~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~ 272 (288)
T 3kfa_A 236 GCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 272 (288)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHh
Confidence 2234677888899999999999999999999887543
No 79
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=1.2e-40 Score=337.41 Aligned_cols=246 Identities=21% Similarity=0.373 Sum_probs=189.8
Q ss_pred HhHcccCCceeEEEEEEcC----CcEEEEEEeccccCC--hHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEecc
Q 006922 329 AEVLGKGTFGMAYKAILED----GTTVVVKRLKDVNVG--KRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYS 402 (625)
Q Consensus 329 ~~~lg~G~~g~Vy~~~~~~----g~~vavK~l~~~~~~--~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 402 (625)
.+.||+|+||+||+|.... +..||+|+++..... .+.+.+|+.++.+++||||+++++++. .+..++||||++
T Consensus 20 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e~~~ 98 (281)
T 1mp8_A 20 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCT 98 (281)
T ss_dssp EEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEEEEECCT
T ss_pred EeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEEEEecCC
Confidence 3569999999999998642 457999998764322 356889999999999999999999984 567899999999
Q ss_pred CCChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEecccccccccccc-
Q 006922 403 LGSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALA- 481 (625)
Q Consensus 403 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~- 481 (625)
+|+|.+++.... ..+++..+..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 99 ~~~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 171 (281)
T 1mp8_A 99 LGELRSFLQVRK----YSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY 171 (281)
T ss_dssp TEEHHHHHHHTT----TTSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECC------------
T ss_pred CCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHhCC---eecccccHHHEEECCCCCEEECccccccccCcccc
Confidence 999999997543 24899999999999999999999998 9999999999999999999999999998764322
Q ss_pred ---cccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHh-CCCCCCCCCCcchhhHHHHHHHHhhccccccccccccc
Q 006922 482 ---PVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELL 557 (625)
Q Consensus 482 ---~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 557 (625)
....++..|+|||.+.+..++.++||||||+++|||++ |+.||......+....+. ....
T Consensus 172 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~------~~~~---------- 235 (281)
T 1mp8_A 172 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE------NGER---------- 235 (281)
T ss_dssp -------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHH------TTCC----------
T ss_pred cccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHH------cCCC----------
Confidence 12245567999999988899999999999999999997 999998765443322211 1110
Q ss_pred CCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCC
Q 006922 558 RYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRP 599 (625)
Q Consensus 558 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~ 599 (625)
.+.......++.+++.+||..||++|||+.|+++.|+++..
T Consensus 236 -~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 276 (281)
T 1mp8_A 236 -LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 276 (281)
T ss_dssp -CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 01111223467788889999999999999999999988753
No 80
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=1.3e-40 Score=336.60 Aligned_cols=247 Identities=25% Similarity=0.407 Sum_probs=202.8
Q ss_pred hHcccCCceeEEEEEEcCCcEEEEEEeccccCChHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccCCChhhh
Q 006922 330 EVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLGSVSAM 409 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~ 409 (625)
+.||+|+||+||+|...++..||+|+++......+.+.+|++++.+++||||+++++++. .+..++||||+++++|.++
T Consensus 19 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L~~~ 97 (279)
T 1qpc_A 19 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYMENGSLVDF 97 (279)
T ss_dssp EEEEEETTEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECCTTCBHHHH
T ss_pred eeecCCCCeEEEEEEEcCCcEEEEEEecCCcccHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEecCCCCCHHHH
Confidence 569999999999999888889999999877666788999999999999999999999986 4568999999999999999
Q ss_pred hccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEecccccccccccc----cccc
Q 006922 410 LHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALA----PVIA 485 (625)
Q Consensus 410 l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~----~~~~ 485 (625)
+..... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++...... ....
T Consensus 98 l~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~ 171 (279)
T 1qpc_A 98 LKTPSG---IKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAK 171 (279)
T ss_dssp TTSHHH---HTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCTTCC
T ss_pred HhcCCC---CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHhhEEEcCCCCEEECCCcccccccCcccccccCCC
Confidence 975421 24899999999999999999999998 9999999999999999999999999998764322 1223
Q ss_pred cCCCcCCccccCCCCCCCccchhhhHHHHHHHHh-CCCCCCCCCCcchhhHHHHHHHHhhcccccccccccccCCCCcHH
Q 006922 486 RAAGYRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIEE 564 (625)
Q Consensus 486 ~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 564 (625)
++..|+|||.+.+..++.++||||||+++|||++ |+.||......+.. ..+. .... . .....
T Consensus 172 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~---~~~~----~~~~--~--------~~~~~ 234 (279)
T 1qpc_A 172 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI---QNLE----RGYR--M--------VRPDN 234 (279)
T ss_dssp CCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHH---HHHH----TTCC--C--------CCCTT
T ss_pred CccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHH---HHHh----cccC--C--------CCccc
Confidence 5667999999988889999999999999999999 99999765432222 1111 1100 0 00111
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCC
Q 006922 565 EMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPN 600 (625)
Q Consensus 565 ~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~ 600 (625)
...++.+++.+|+..+|++|||+.++++.|+++...
T Consensus 235 ~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 270 (279)
T 1qpc_A 235 CPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 270 (279)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHh
Confidence 224677888899999999999999999999988643
No 81
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=3e-40 Score=349.64 Aligned_cols=240 Identities=17% Similarity=0.298 Sum_probs=191.5
Q ss_pred HhHcccCCceeEEEEEEc-CCcEEEEEEeccccCC----hHHHHHHHHHHHcC-CCCceecceeEEEecCceEEEEEecc
Q 006922 329 AEVLGKGTFGMAYKAILE-DGTTVVVKRLKDVNVG----KRDFEQQMEIVGSI-RHENVVELKAYYYSKDEKLMVYDYYS 402 (625)
Q Consensus 329 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~----~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~ 402 (625)
.++||+|+||+||+|+.. +++.||+|++++.... .+.+.+|..++.++ +||||+++++++.+.+..++||||++
T Consensus 57 ~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV~E~~~ 136 (396)
T 4dc2_A 57 LRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVN 136 (396)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEEEEcCC
Confidence 367999999999999965 5889999999865322 24578899999877 89999999999999999999999999
Q ss_pred CCChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEeccccccccc---c
Q 006922 403 LGSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITS---A 479 (625)
Q Consensus 403 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~---~ 479 (625)
+|+|..++.... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++... .
T Consensus 137 gg~L~~~l~~~~-----~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~ 208 (396)
T 4dc2_A 137 GGDLMFHMQRQR-----KLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD 208 (396)
T ss_dssp TCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTC
T ss_pred CCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---EEeccCCHHHEEECCCCCEEEeecceeeecccCCC
Confidence 999999997653 3899999999999999999999998 9999999999999999999999999998632 2
Q ss_pred cccccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchh--hHHHHHHHHhhccccccccccccc
Q 006922 480 LAPVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELV--HLVRWVHSVVREEWTAEVFDVELL 557 (625)
Q Consensus 480 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~d~~~~ 557 (625)
......||+.|+|||++.+..++.++|||||||++|||++|+.||......+.. .....+...+.....
T Consensus 209 ~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~--------- 279 (396)
T 4dc2_A 209 TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI--------- 279 (396)
T ss_dssp CBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCC---------
T ss_pred ccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhcccc---------
Confidence 234457899999999999999999999999999999999999999754322111 111111111111100
Q ss_pred CCCCcHHHHHHHHHHHHHccCCCCCCCCCH
Q 006922 558 RYPNIEEEMVEMLQIAMSCVVRMPDQRPKM 587 (625)
Q Consensus 558 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~ 587 (625)
..+ .....++.+++.+||+.||.+||++
T Consensus 280 ~~p--~~~s~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 280 RIP--RSLSVKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp CCC--TTSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred CCC--CcCCHHHHHHHHHHhcCCHhHcCCC
Confidence 011 1122356778889999999999995
No 82
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=4e-40 Score=347.46 Aligned_cols=241 Identities=20% Similarity=0.291 Sum_probs=197.1
Q ss_pred HhHcccCCceeEEEEEEc-CCcEEEEEEecccc----CChHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccC
Q 006922 329 AEVLGKGTFGMAYKAILE-DGTTVVVKRLKDVN----VGKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSL 403 (625)
Q Consensus 329 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 403 (625)
.+.||+|+||+||++... +++.||+|++.... ...+.+.+|++++..++|||||++++++.+.+..++||||+++
T Consensus 20 ~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~e~~~g 99 (384)
T 4fr4_A 20 LRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLG 99 (384)
T ss_dssp EEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEecCCC
Confidence 367999999999999965 58999999997532 2346788999999999999999999999999999999999999
Q ss_pred CChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEeccccccccccc--c
Q 006922 404 GSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSAL--A 481 (625)
Q Consensus 404 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~--~ 481 (625)
|+|..++.... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++..... .
T Consensus 100 g~L~~~l~~~~-----~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~ 171 (384)
T 4fr4_A 100 GDLRYHLQQNV-----HFKEETVKLFICELVMALDYLQNQR---IIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQI 171 (384)
T ss_dssp EEHHHHHHTTC-----CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCTTCCB
T ss_pred CcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCcHHHeEECCCCCEEEeccceeeeccCCCce
Confidence 99999997542 4899999999999999999999998 999999999999999999999999999876432 3
Q ss_pred cccccCCCcCCccccCC---CCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccccccccccC
Q 006922 482 PVIARAAGYRAPEVTDS---RKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLR 558 (625)
Q Consensus 482 ~~~~~~~~y~aPE~~~~---~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 558 (625)
....||..|+|||++.. ..++.++|||||||++|||++|+.||.................. . .
T Consensus 172 ~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~---~----------~- 237 (384)
T 4fr4_A 172 TTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETT---V----------V- 237 (384)
T ss_dssp CCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHHC---C----------C-
T ss_pred eccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhhc---c----------c-
Confidence 34578999999999864 45899999999999999999999999865544443333322110 0 0
Q ss_pred CCCcHHHHHHHHHHHHHccCCCCCCCCC-HHHHHH
Q 006922 559 YPNIEEEMVEMLQIAMSCVVRMPDQRPK-MPDVVR 592 (625)
Q Consensus 559 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPs-~~ev~~ 592 (625)
........++.+++.+||+.||.+||+ ++++.+
T Consensus 238 -~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 238 -TYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp -CCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred -CCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 011112346677888999999999998 666653
No 83
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=8.6e-41 Score=348.16 Aligned_cols=236 Identities=24% Similarity=0.374 Sum_probs=194.5
Q ss_pred hHcccCCceeEEEEEEc-CCcEEEEEEeccc----cCChHHHHHHHHHHHcC-CCCceecceeEEEecCceEEEEEeccC
Q 006922 330 EVLGKGTFGMAYKAILE-DGTTVVVKRLKDV----NVGKRDFEQQMEIVGSI-RHENVVELKAYYYSKDEKLMVYDYYSL 403 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~----~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 403 (625)
+.||+|+||+||+|+.. +|+.||+|+++.. ....+.+..|.+++..+ +||||+++++++.+.+..++||||+++
T Consensus 23 ~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~g 102 (345)
T 1xjd_A 23 KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNG 102 (345)
T ss_dssp EEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEEEEeCCCC
Confidence 57999999999999965 6899999999764 22345678899998876 899999999999999999999999999
Q ss_pred CChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEeccccccccc---cc
Q 006922 404 GSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITS---AL 480 (625)
Q Consensus 404 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~---~~ 480 (625)
|+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++... ..
T Consensus 103 g~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~ 174 (345)
T 1xjd_A 103 GDLMYHIQSCH-----KFDLSRATFYAAEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK 174 (345)
T ss_dssp CBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCC
T ss_pred CcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCChhhEEECCCCCEEEeEChhhhhcccCCCc
Confidence 99999997643 3899999999999999999999998 9999999999999999999999999998642 22
Q ss_pred ccccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccccccccccCCC
Q 006922 481 APVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYP 560 (625)
Q Consensus 481 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 560 (625)
.....||..|+|||++.+..++.++||||+||++|||++|+.||...+..+....+. ... .. .+
T Consensus 175 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~------~~~-------~~---~p 238 (345)
T 1xjd_A 175 TNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIR------MDN-------PF---YP 238 (345)
T ss_dssp BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH------HCC-------CC---CC
T ss_pred ccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH------hCC-------CC---CC
Confidence 344578999999999999999999999999999999999999997654333222111 111 00 01
Q ss_pred CcHHHHHHHHHHHHHccCCCCCCCCCHH-HHH
Q 006922 561 NIEEEMVEMLQIAMSCVVRMPDQRPKMP-DVV 591 (625)
Q Consensus 561 ~~~~~~~~l~~l~~~Cl~~~P~~RPs~~-ev~ 591 (625)
.....++.+++.+|+..||++||++. |+.
T Consensus 239 --~~~s~~~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 239 --RWLEKEAKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp --TTSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred --cccCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence 11123566778899999999999997 664
No 84
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=1.9e-40 Score=348.38 Aligned_cols=244 Identities=19% Similarity=0.265 Sum_probs=189.0
Q ss_pred hHcccCCceeEEEEEEc-CCcEEEEEEeccccCChHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccCCChhh
Q 006922 330 EVLGKGTFGMAYKAILE-DGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLGSVSA 408 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~ 408 (625)
+.||+|+||+||+++.. +++.||+|++.......+.+.+|+.++++++||||+++++++...+..++||||+++|+|.+
T Consensus 26 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~ 105 (361)
T 3uc3_A 26 KDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYE 105 (361)
T ss_dssp EEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHH
T ss_pred EEeccCCCEEEEEEEECCCCcEEEEEEEecCccccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeCCCCCHHH
Confidence 56999999999999965 78999999998766666789999999999999999999999999999999999999999999
Q ss_pred hhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCC--eeEeccccccccc--cccccc
Q 006922 409 MLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQY--GCVSDLGLTTITS--ALAPVI 484 (625)
Q Consensus 409 ~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~--~kl~DfGla~~~~--~~~~~~ 484 (625)
++.... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++. +||+|||+++... ......
T Consensus 106 ~l~~~~-----~~~~~~~~~i~~ql~~~L~~LH~~~---ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~~~~~~ 177 (361)
T 3uc3_A 106 RICNAG-----RFSEDEARFFFQQLLSGVSYCHSMQ---ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST 177 (361)
T ss_dssp HHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTT---CCSCCCCGGGEEECSSSSCCEEECCCCCC------------
T ss_pred HHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCceEEEeecCccccccccCCCCCC
Confidence 987643 3899999999999999999999998 999999999999988775 9999999997542 222345
Q ss_pred ccCCCcCCccccCCCCCCCc-cchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccccccccccCCCCcH
Q 006922 485 ARAAGYRAPEVTDSRKATQA-SDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIE 563 (625)
Q Consensus 485 ~~~~~y~aPE~~~~~~~~~~-~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 563 (625)
.||..|+|||++.+..++.+ +||||+||++|||++|+.||......+.. ...+........ ..+...
T Consensus 178 ~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~--~~~~~~~~~~~~----------~~~~~~ 245 (361)
T 3uc3_A 178 VGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDY--RKTIQRILSVKY----------SIPDDI 245 (361)
T ss_dssp ---CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCH--HHHHHHHHTTCC----------CCCTTS
T ss_pred cCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHH--HHHHHHHhcCCC----------CCCCcC
Confidence 68899999999988777655 89999999999999999999765432221 111111111110 001111
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006922 564 EEMVEMLQIAMSCVVRMPDQRPKMPDVVRV 593 (625)
Q Consensus 564 ~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 593 (625)
....++.+++.+||+.||++|||+.|+++.
T Consensus 246 ~~s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 246 RISPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp CCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred CCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 112356778889999999999999999873
No 85
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.8e-40 Score=343.42 Aligned_cols=258 Identities=22% Similarity=0.351 Sum_probs=196.2
Q ss_pred HhHcccCCceeEEEEEEcCCcEEEEEEeccccCChHHHHHHHHHHHcC--CCCceecceeEEEec----CceEEEEEecc
Q 006922 329 AEVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSI--RHENVVELKAYYYSK----DEKLMVYDYYS 402 (625)
Q Consensus 329 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l--~h~niv~l~~~~~~~----~~~~lv~e~~~ 402 (625)
.+.||+|+||+||+|... |+.||||++.... ...+.+|.+++... +||||+++++++... ...++||||++
T Consensus 42 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~ 118 (337)
T 3mdy_A 42 VKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTE--EASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHE 118 (337)
T ss_dssp EEEEEEETTEEEEEEEET-TEEEEEEEEEGGG--HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEEEECCCT
T ss_pred EeEeecCCCeEEEEEEEC-CceEEEEEEeccc--cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEEEEeccC
Confidence 467999999999999875 8999999996543 34455566665554 899999999999887 67899999999
Q ss_pred CCChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcC-----CCCceecCCCCCCEEeCCCCCeeEecccccccc
Q 006922 403 LGSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAAN-----GGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTIT 477 (625)
Q Consensus 403 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~-----~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~ 477 (625)
+|+|.+++... .+++..+..++.|++.||+|||+.. .++|+||||||+|||++.++.+||+|||+++..
T Consensus 119 ~g~L~~~l~~~------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a~~~ 192 (337)
T 3mdy_A 119 NGSLYDYLKST------TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKF 192 (337)
T ss_dssp TCBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred CCcHHHHhhcc------CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeCCCceee
Confidence 99999999753 3899999999999999999999881 113999999999999999999999999999765
Q ss_pred cccc-------cccccCCCcCCccccCCCCCCCc------cchhhhHHHHHHHHhC----------CCCCCCCCCcchhh
Q 006922 478 SALA-------PVIARAAGYRAPEVTDSRKATQA------SDVYSFGVVLLEILTG----------KSPIHTTGGDELVH 534 (625)
Q Consensus 478 ~~~~-------~~~~~~~~y~aPE~~~~~~~~~~------~DvwS~Gvil~elltG----------~~p~~~~~~~~~~~ 534 (625)
.... ....||..|+|||++.+..++.+ +|||||||++|||+|| +.||.........
T Consensus 193 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~- 271 (337)
T 3mdy_A 193 ISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPS- 271 (337)
T ss_dssp C---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCC-
T ss_pred ccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCCCc-
Confidence 4322 13468889999999987766665 9999999999999999 6677553322211
Q ss_pred HHHHHHHHhhcccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCC
Q 006922 535 LVRWVHSVVREEWTAEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPND 601 (625)
Q Consensus 535 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~ 601 (625)
.............. +.........+...++.+++.+||+.||++|||+.|+++.|+.+.++.
T Consensus 272 -~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~ 333 (337)
T 3mdy_A 272 -YEDMREIVCIKKLR----PSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQ 333 (337)
T ss_dssp -HHHHHHHHTTSCCC----CCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred -hhhhHHHHhhhccC----ccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhc
Confidence 01111111111111 111000112356677889999999999999999999999999987654
No 86
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=3.1e-40 Score=346.74 Aligned_cols=242 Identities=21% Similarity=0.325 Sum_probs=196.3
Q ss_pred HhHcccCCceeEEEEEEc-CCcEEEEEEeccccCCh---HHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccCC
Q 006922 329 AEVLGKGTFGMAYKAILE-DGTTVVVKRLKDVNVGK---RDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLG 404 (625)
Q Consensus 329 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~---~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 404 (625)
.+.||+|+||+||+|... +|+.||+|+++...... +.+.+|++++.+++||||+++++++.+.+..++||||+++|
T Consensus 34 ~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~e~~~gg 113 (362)
T 2bdw_A 34 KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGG 113 (362)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred eeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCCC
Confidence 467999999999999964 68999999997654332 56889999999999999999999999999999999999999
Q ss_pred ChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCC---CeeEecccccccccccc
Q 006922 405 SVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQ---YGCVSDLGLTTITSALA 481 (625)
Q Consensus 405 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~---~~kl~DfGla~~~~~~~ 481 (625)
+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++ .+||+|||+++......
T Consensus 114 ~L~~~l~~~~-----~~~~~~~~~~~~qi~~al~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~~ 185 (362)
T 2bdw_A 114 ELFEDIVARE-----FYSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE 185 (362)
T ss_dssp BHHHHHTTCS-----CCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTCC
T ss_pred CHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCchHHEEEecCCCCCCEEEeecCcceEecCCc
Confidence 9999887542 4899999999999999999999998 99999999999998654 59999999998765432
Q ss_pred --cccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccccccccccCC
Q 006922 482 --PVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRY 559 (625)
Q Consensus 482 --~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 559 (625)
....||..|+|||++.+..++.++|||||||++|||++|+.||......+.. ..+. .... +.. .
T Consensus 186 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~---~~i~---~~~~-----~~~---~ 251 (362)
T 2bdw_A 186 AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLY---AQIK---AGAY-----DYP---S 251 (362)
T ss_dssp SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH---HHHH---HTCC-----CCC---T
T ss_pred ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHH---HHHH---hCCC-----CCC---c
Confidence 2357889999999999999999999999999999999999999764432222 1111 1110 000 0
Q ss_pred CCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006922 560 PNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR 592 (625)
Q Consensus 560 ~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 592 (625)
+.......++.+++.+||..||++||++.|+++
T Consensus 252 ~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 284 (362)
T 2bdw_A 252 PEWDTVTPEAKSLIDSMLTVNPKKRITADQALK 284 (362)
T ss_dssp TGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ccccCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 001112345677888999999999999999875
No 87
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=3.2e-40 Score=345.37 Aligned_cols=245 Identities=18% Similarity=0.298 Sum_probs=195.5
Q ss_pred HhHcccCCceeEEEEEEc-CCcEEEEEEecccc------CChHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEec
Q 006922 329 AEVLGKGTFGMAYKAILE-DGTTVVVKRLKDVN------VGKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYY 401 (625)
Q Consensus 329 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 401 (625)
.+.||+|+||+||+|... +|+.||||+++... ...+.+.+|++++..++||||+++++++...+..++||||+
T Consensus 29 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~ 108 (351)
T 3c0i_A 29 CEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFM 108 (351)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred eeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEeCC
Confidence 467999999999999964 68999999986421 23567999999999999999999999999999999999999
Q ss_pred cCCChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCC---eeEeccccccccc
Q 006922 402 SLGSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQY---GCVSDLGLTTITS 478 (625)
Q Consensus 402 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~---~kl~DfGla~~~~ 478 (625)
++|+|.+.+..... ....+++..+..++.|++.||+|||+++ |+||||||+|||++.++. +||+|||+++...
T Consensus 109 ~g~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~~ 184 (351)
T 3c0i_A 109 DGADLCFEIVKRAD-AGFVYSEAVASHYMRQILEALRYCHDNN---IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLG 184 (351)
T ss_dssp SSCBHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECSSSTTCCEEECCCTTCEECC
T ss_pred CCCCHHHHHHHhcc-cCCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCChHHeEEecCCCCCcEEEecCcceeEec
Confidence 99999888765432 1234899999999999999999999998 999999999999987655 9999999998765
Q ss_pred ccc---cccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhccccccccccc
Q 006922 479 ALA---PVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVE 555 (625)
Q Consensus 479 ~~~---~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 555 (625)
... ....||..|+|||++.+..++.++|||||||++|||++|+.||.... ..... ........ .++.
T Consensus 185 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~----~~~~~---~i~~~~~~---~~~~ 254 (351)
T 3c0i_A 185 ESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK----ERLFE---GIIKGKYK---MNPR 254 (351)
T ss_dssp TTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSH----HHHHH---HHHHTCCC---CCHH
T ss_pred CCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcH----HHHHH---HHHcCCCC---CCcc
Confidence 432 23468889999999999999999999999999999999999997532 11111 11111100 0000
Q ss_pred ccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006922 556 LLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR 592 (625)
Q Consensus 556 ~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 592 (625)
. .+ ....++.+++.+||..||++|||+.|+++
T Consensus 255 ~--~~---~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 255 Q--WS---HISESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp H--HT---TSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred c--cc---cCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 0 00 11235677888999999999999999985
No 88
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2e-40 Score=344.44 Aligned_cols=248 Identities=27% Similarity=0.465 Sum_probs=196.2
Q ss_pred hHcccCCceeEEEEEEcC-----CcEEEEEEeccccC--ChHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEecc
Q 006922 330 EVLGKGTFGMAYKAILED-----GTTVVVKRLKDVNV--GKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYS 402 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~~-----g~~vavK~l~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 402 (625)
+.||+|+||+||+|.... +..||||+++.... ....+.+|++++.+++||||+++++++...+..++||||++
T Consensus 50 ~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 129 (333)
T 1mqb_A 50 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYME 129 (333)
T ss_dssp EEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred cEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEEEEeCCC
Confidence 579999999999998542 24699999986432 23568899999999999999999999999999999999999
Q ss_pred CCChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEeccccccccccccc
Q 006922 403 LGSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAP 482 (625)
Q Consensus 403 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~ 482 (625)
+|+|.+++..... .+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++.......
T Consensus 130 ~~~L~~~l~~~~~----~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 202 (333)
T 1mqb_A 130 NGALDKFLREKDG----EFSVLQLVGMLRGIAAGMKYLANMN---YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPE 202 (333)
T ss_dssp TEEHHHHHHHTTT----CSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCCCC---------
T ss_pred CCcHHHHHHhCCC----CCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChheEEECCCCcEEECCCCcchhhccccc
Confidence 9999999976432 4899999999999999999999998 99999999999999999999999999987643211
Q ss_pred ------ccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHh-CCCCCCCCCCcchhhHHHHHHHHhhccccccccccc
Q 006922 483 ------VIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVE 555 (625)
Q Consensus 483 ------~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 555 (625)
...++..|+|||.+.+..++.++|||||||++|||++ |+.||......+... .+. ...
T Consensus 203 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~---~~~----~~~-------- 267 (333)
T 1mqb_A 203 ATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMK---AIN----DGF-------- 267 (333)
T ss_dssp --------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHH---HHH----TTC--------
T ss_pred cccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHH---HHH----CCC--------
Confidence 1234567999999998899999999999999999999 999997654332221 111 110
Q ss_pred ccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCC
Q 006922 556 LLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPND 601 (625)
Q Consensus 556 ~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~ 601 (625)
..+........+.+++.+||+.+|++||++.|+++.|+++....
T Consensus 268 --~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~ 311 (333)
T 1mqb_A 268 --RLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAP 311 (333)
T ss_dssp --CCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSG
T ss_pred --cCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcc
Confidence 01111122346778888999999999999999999999886543
No 89
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=3.5e-40 Score=340.23 Aligned_cols=263 Identities=19% Similarity=0.313 Sum_probs=192.0
Q ss_pred HhHcccCCceeEEEEEE-cCCcEEEEEEeccccC--ChHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccCCC
Q 006922 329 AEVLGKGTFGMAYKAIL-EDGTTVVVKRLKDVNV--GKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLGS 405 (625)
Q Consensus 329 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 405 (625)
.+.||+|+||+||+|.. .+|+.||+|+++.... ..+.+.+|++++.+++||||+++++++...+..++||||++ |+
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~-~~ 88 (317)
T 2pmi_A 10 LEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFMD-ND 88 (317)
T ss_dssp ---------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEECCC-CB
T ss_pred eeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEEecC-CC
Confidence 46799999999999995 4689999999975432 34678899999999999999999999999999999999998 59
Q ss_pred hhhhhccccCC-CCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEeccccccccccc---c
Q 006922 406 VSAMLHSERGE-GRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSAL---A 481 (625)
Q Consensus 406 L~~~l~~~~~~-~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~---~ 481 (625)
|.+++...... ....+++..+..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++..... .
T Consensus 89 L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~ 165 (317)
T 2pmi_A 89 LKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK---ILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTF 165 (317)
T ss_dssp HHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCSSCEETTSCCCCC
T ss_pred HHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCChHHeEEcCCCCEEECcCccceecCCCcccC
Confidence 99988754321 1234899999999999999999999998 999999999999999999999999999876432 2
Q ss_pred cccccCCCcCCccccCC-CCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhc---cccccc-----c
Q 006922 482 PVIARAAGYRAPEVTDS-RKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVRE---EWTAEV-----F 552 (625)
Q Consensus 482 ~~~~~~~~y~aPE~~~~-~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-----~ 552 (625)
....+|..|+|||++.+ ..++.++|||||||++|||++|+.||......+....+ ...... .....+ +
T Consensus 166 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i---~~~~~~~~~~~~~~~~~~~~~ 242 (317)
T 2pmi_A 166 SSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLI---FDIMGTPNESLWPSVTKLPKY 242 (317)
T ss_dssp CCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH---HHHHCSCCTTTCGGGGGCTTC
T ss_pred CCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHH---HHHhCCCChhHhhhhhhhhhc
Confidence 23467889999999876 46899999999999999999999999865443322221 111110 000000 0
Q ss_pred cccccCC--CCc---------HHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHHhhC
Q 006922 553 DVELLRY--PNI---------EEEMVEMLQIAMSCVVRMPDQRPKMPDVVR--VIENVR 598 (625)
Q Consensus 553 d~~~~~~--~~~---------~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~--~L~~~~ 598 (625)
.+..... ... .....++.+++.+|++.||++|||+.|+++ .+.+..
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~ 301 (317)
T 2pmi_A 243 NPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAEYY 301 (317)
T ss_dssp CTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGC
T ss_pred ccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCChhhhccc
Confidence 0000000 000 011235778888999999999999999986 344443
No 90
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=7.4e-41 Score=340.18 Aligned_cols=247 Identities=22% Similarity=0.384 Sum_probs=195.3
Q ss_pred hHcccCCceeEEEEEEc-CC-------cEEEEEEecccc-CChHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEe
Q 006922 330 EVLGKGTFGMAYKAILE-DG-------TTVVVKRLKDVN-VGKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDY 400 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~-~g-------~~vavK~l~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 400 (625)
+.||+|+||+||+|... ++ ..||+|++.... ...+.+.+|++++.+++||||+++++++...+..++||||
T Consensus 14 ~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 93 (289)
T 4fvq_A 14 ESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEF 93 (289)
T ss_dssp EEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCCEEEEEC
T ss_pred eeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCCEEEEEC
Confidence 56999999999999854 33 579999997653 3346799999999999999999999999999999999999
Q ss_pred ccCCChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCC--------eeEeccc
Q 006922 401 YSLGSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQY--------GCVSDLG 472 (625)
Q Consensus 401 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~--------~kl~DfG 472 (625)
+++|+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++. +||+|||
T Consensus 94 ~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg 166 (289)
T 4fvq_A 94 VKFGSLDTYLKKNK----NCINILWKLEVAKQLAAAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPG 166 (289)
T ss_dssp CTTCBHHHHHHHTG----GGCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEEECCBGGGTBCCEEEECCCC
T ss_pred CCCCCHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHhhCC---eECCCcCcceEEEecCCcccccccceeeeccCc
Confidence 99999999998643 23899999999999999999999998 999999999999998887 9999999
Q ss_pred ccccccccccccccCCCcCCccccCC-CCCCCccchhhhHHHHHHHHhCCC-CCCCCCCcchhhHHHHHHHHhhcccccc
Q 006922 473 LTTITSALAPVIARAAGYRAPEVTDS-RKATQASDVYSFGVVLLEILTGKS-PIHTTGGDELVHLVRWVHSVVREEWTAE 550 (625)
Q Consensus 473 la~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwS~Gvil~elltG~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 550 (625)
++...... ....++..|+|||.+.+ ..++.++||||||+++|||++|.. ||....... ...... ....
T Consensus 167 ~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~---~~~~~~---~~~~--- 236 (289)
T 4fvq_A 167 ISITVLPK-DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQR---KLQFYE---DRHQ--- 236 (289)
T ss_dssp SCTTTSCH-HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH---HHHHHH---TTCC---
T ss_pred ccccccCc-cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHH---HHHHhh---ccCC---
Confidence 99766443 23457888999999987 678999999999999999999554 444322111 111111 0000
Q ss_pred cccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCCCC
Q 006922 551 VFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPNDSE 603 (625)
Q Consensus 551 ~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~~~ 603 (625)
.. . ....++.+++.+||+.||++|||+.|+++.|+++......
T Consensus 237 -----~~--~---~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~~~ 279 (289)
T 4fvq_A 237 -----LP--A---PKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDLV 279 (289)
T ss_dssp -----CC--C---CSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC-----
T ss_pred -----CC--C---CCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCCCC
Confidence 00 0 0122467788899999999999999999999998774433
No 91
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.4e-40 Score=343.59 Aligned_cols=236 Identities=22% Similarity=0.302 Sum_probs=194.1
Q ss_pred hHcccCCceeEEEEEE-cCCcEEEEEEecccc----CChHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccCC
Q 006922 330 EVLGKGTFGMAYKAIL-EDGTTVVVKRLKDVN----VGKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLG 404 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 404 (625)
+.||+|+||+||+|.. .+|+.||+|++.... .....+.+|++++..++||||+++++++...+..++||||+ +|
T Consensus 15 ~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~-~g 93 (336)
T 3h4j_B 15 ETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYA-GG 93 (336)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCC-CE
T ss_pred EEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEECC-CC
Confidence 5699999999999996 578999999997532 22357899999999999999999999999999999999999 68
Q ss_pred ChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEeccccccccccc--cc
Q 006922 405 SVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSAL--AP 482 (625)
Q Consensus 405 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~--~~ 482 (625)
+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++...... ..
T Consensus 94 ~l~~~l~~~~-----~l~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~~~~ 165 (336)
T 3h4j_B 94 ELFDYIVEKK-----RMTEDEGRRFFQQIICAIEYCHRHK---IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLK 165 (336)
T ss_dssp EHHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSBTTC
T ss_pred cHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCchhhEEEcCCCCEEEEEeccceeccCCcccc
Confidence 9988887643 3899999999999999999999998 999999999999999999999999999876433 23
Q ss_pred ccccCCCcCCccccCCCCC-CCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccccccccccCCCC
Q 006922 483 VIARAAGYRAPEVTDSRKA-TQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPN 561 (625)
Q Consensus 483 ~~~~~~~y~aPE~~~~~~~-~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 561 (625)
...||+.|+|||.+.+..+ +.++|||||||++|||++|+.||......+... .+.... ...
T Consensus 166 ~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~---------------~i~~~~---~~~ 227 (336)
T 3h4j_B 166 TSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFK---------------KVNSCV---YVM 227 (336)
T ss_dssp CCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBC---------------CCCSSC---CCC
T ss_pred cccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHH---------------HHHcCC---CCC
Confidence 4568899999999988776 689999999999999999999997654332211 000000 011
Q ss_pred cHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006922 562 IEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR 592 (625)
Q Consensus 562 ~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 592 (625)
......++.+++.+|++.||.+|||++|+++
T Consensus 228 p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~ 258 (336)
T 3h4j_B 228 PDFLSPGAQSLIRRMIVADPMQRITIQEIRR 258 (336)
T ss_dssp CTTSCHHHHHHHHTTSCSSGGGSCCHHHHTT
T ss_pred cccCCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence 1112335677888999999999999999986
No 92
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.5e-40 Score=345.11 Aligned_cols=256 Identities=21% Similarity=0.327 Sum_probs=200.9
Q ss_pred HhHcccCCceeEEEEEE------cCCcEEEEEEecccc--CChHHHHHHHHHHHcC-CCCceecceeEEEecCceEEEEE
Q 006922 329 AEVLGKGTFGMAYKAIL------EDGTTVVVKRLKDVN--VGKRDFEQQMEIVGSI-RHENVVELKAYYYSKDEKLMVYD 399 (625)
Q Consensus 329 ~~~lg~G~~g~Vy~~~~------~~g~~vavK~l~~~~--~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e 399 (625)
.+.||+|+||+||+|.. .++..||+|+++... ...+.+.+|++++.++ +||||+++++++...+..++|||
T Consensus 50 ~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e 129 (344)
T 1rjb_A 50 GKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFE 129 (344)
T ss_dssp EEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCccEEEEe
Confidence 46799999999999995 245689999997542 2346789999999999 89999999999999999999999
Q ss_pred eccCCChhhhhccccCC------------------CCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeC
Q 006922 400 YYSLGSVSAMLHSERGE------------------GRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLN 461 (625)
Q Consensus 400 ~~~~g~L~~~l~~~~~~------------------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~ 461 (625)
|+++|+|.+++...... ....+++..+..++.|++.||+|||+.+ |+||||||+|||++
T Consensus 130 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIll~ 206 (344)
T 1rjb_A 130 YCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS---CVHRDLAARNVLVT 206 (344)
T ss_dssp CCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTT---EEETTCSGGGEEEE
T ss_pred cCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChhhEEEc
Confidence 99999999999765321 1124799999999999999999999998 99999999999999
Q ss_pred CCCCeeEecccccccccccc-----cccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHh-CCCCCCCCCCcchhhH
Q 006922 462 SQQYGCVSDLGLTTITSALA-----PVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHL 535 (625)
Q Consensus 462 ~~~~~kl~DfGla~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~~~ 535 (625)
.++.+||+|||+++...... ....++..|+|||.+.+..++.++|||||||++|||+| |+.||......+...
T Consensus 207 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~- 285 (344)
T 1rjb_A 207 HGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFY- 285 (344)
T ss_dssp TTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHH-
T ss_pred CCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcHHHHH-
Confidence 99999999999998654322 12345677999999988889999999999999999998 999997765433221
Q ss_pred HHHHHHHhhcccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCCCC
Q 006922 536 VRWVHSVVREEWTAEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPNDSE 603 (625)
Q Consensus 536 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~~~ 603 (625)
..+ ..... .+.......++.+++.+||..||.+|||+.|+++.|+.+......
T Consensus 286 -~~~----~~~~~----------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~ 338 (344)
T 1rjb_A 286 -KLI----QNGFK----------MDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADAEE 338 (344)
T ss_dssp -HHH----HTTCC----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-----
T ss_pred -HHH----hcCCC----------CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHHHH
Confidence 111 11100 011111234677888899999999999999999999998776543
No 93
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=1.5e-40 Score=373.18 Aligned_cols=242 Identities=23% Similarity=0.354 Sum_probs=196.8
Q ss_pred hHcccCCceeEEEEEE---cCCcEEEEEEeccccCC---hHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccC
Q 006922 330 EVLGKGTFGMAYKAIL---EDGTTVVVKRLKDVNVG---KRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSL 403 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~---~~g~~vavK~l~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 403 (625)
+.||+|+||+||+|.. ..++.||||+++..... .+++.+|++++.+++|||||++++++.. +..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 3699999999999964 24688999999865332 3679999999999999999999999964 568899999999
Q ss_pred CChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEecccccccccccc--
Q 006922 404 GSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALA-- 481 (625)
Q Consensus 404 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~-- 481 (625)
|+|.+++.... .+++..+..|+.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 454 g~L~~~l~~~~-----~l~~~~~~~i~~qi~~~L~yLH~~~---iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 525 (635)
T 4fl3_A 454 GPLNKYLQQNR-----HVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 525 (635)
T ss_dssp EEHHHHHHHCT-----TCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCTTHHHHTTC----
T ss_pred CCHHHHHhhCC-----CCCHHHHHHHHHHHHHHHHHHHHCC---EeCCCCChHhEEEeCCCCEEEEEcCCccccccCccc
Confidence 99999997543 4899999999999999999999998 9999999999999999999999999998764322
Q ss_pred ----cccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHh-CCCCCCCCCCcchhhHHHHHHHHhhcccccccccccc
Q 006922 482 ----PVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVEL 556 (625)
Q Consensus 482 ----~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 556 (625)
....++..|+|||++.+..++.++|||||||++|||++ |+.||......+....+. .+.
T Consensus 526 ~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~-------~~~--------- 589 (635)
T 4fl3_A 526 YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE-------KGE--------- 589 (635)
T ss_dssp ---------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHH-------TTC---------
T ss_pred cccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-------cCC---------
Confidence 11234567999999998899999999999999999999 999998765433322221 110
Q ss_pred cCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhh
Q 006922 557 LRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENV 597 (625)
Q Consensus 557 ~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~ 597 (625)
..+.......++.+++..||+.||++||++.+|++.|+++
T Consensus 590 -~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~ 629 (635)
T 4fl3_A 590 -RMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNY 629 (635)
T ss_dssp -CCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred -CCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence 0011122335678888999999999999999999999876
No 94
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=3e-40 Score=348.18 Aligned_cols=242 Identities=21% Similarity=0.344 Sum_probs=192.0
Q ss_pred hHcccCCceeEEEEEE-cCCcEEEEEEeccccC-ChHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccCCChh
Q 006922 330 EVLGKGTFGMAYKAIL-EDGTTVVVKRLKDVNV-GKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLGSVS 407 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~ 407 (625)
+.||+|+||+||+|.. .+|+.||+|+++.... ..+.+.+|++++.+++||||+++++++...+..++||||+++|+|.
T Consensus 95 ~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L~ 174 (373)
T 2x4f_A 95 EILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELF 174 (373)
T ss_dssp EECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEEH
T ss_pred eEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcHH
Confidence 4699999999999995 4699999999986532 3467899999999999999999999999999999999999999999
Q ss_pred hhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEe--CCCCCeeEecccccccccccc--cc
Q 006922 408 AMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFL--NSQQYGCVSDLGLTTITSALA--PV 483 (625)
Q Consensus 408 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll--~~~~~~kl~DfGla~~~~~~~--~~ 483 (625)
+++.... ..+++..+..++.|+++||+|||+.+ |+||||||+|||+ +.++.+||+|||+++...... ..
T Consensus 175 ~~l~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~~~~ 247 (373)
T 2x4f_A 175 DRIIDES----YNLTELDTILFMKQICEGIRHMHQMY---ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKV 247 (373)
T ss_dssp HHHHHTG----GGCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCBCCC
T ss_pred HHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEEecCCCCcEEEEeCCCceecCCcccccc
Confidence 9887542 24899999999999999999999998 9999999999999 567889999999998765432 23
Q ss_pred cccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccccccccccCCCCcH
Q 006922 484 IARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIE 563 (625)
Q Consensus 484 ~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 563 (625)
..+|..|+|||++.+..++.++|||||||++|||++|+.||......+.. .......+. ..+.. .+.
T Consensus 248 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~------~~i~~~~~~--~~~~~---~~~-- 314 (373)
T 2x4f_A 248 NFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETL------NNILACRWD--LEDEE---FQD-- 314 (373)
T ss_dssp CCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHH------HHHHHTCCC--SCSGG---GTT--
T ss_pred ccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHH------HHHHhccCC--CChhh---hcc--
Confidence 46889999999999889999999999999999999999999765432221 111111110 00000 011
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006922 564 EEMVEMLQIAMSCVVRMPDQRPKMPDVVR 592 (625)
Q Consensus 564 ~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 592 (625)
...++.+++.+|++.||.+|||+.|+++
T Consensus 315 -~~~~~~~li~~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 315 -ISEEAKEFISKLLIKEKSWRISASEALK 342 (373)
T ss_dssp -SCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred -CCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 1235677888999999999999999987
No 95
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=6.3e-40 Score=334.38 Aligned_cols=265 Identities=15% Similarity=0.142 Sum_probs=208.2
Q ss_pred hHcccCCceeEEEEEE-cCCcEEEEEEeccccCChHHHHHHHHHHHcCCCCceecceeEE-EecCceEEEEEeccCCChh
Q 006922 330 EVLGKGTFGMAYKAIL-EDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYY-YSKDEKLMVYDYYSLGSVS 407 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~-~~~~~~~lv~e~~~~g~L~ 407 (625)
+.||+|+||+||+|.. .+|+.||||++.... ..+.+.+|++++..++|++++..+.++ ...+..++||||+ +++|.
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~ 92 (296)
T 3uzp_A 15 RKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT-KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GPSLE 92 (296)
T ss_dssp EEEEEETTEEEEEEEETTTTEEEEEEEEESCS-SCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-CCBHH
T ss_pred EEEccCCCeEEEEEEEcCCCcEEEEEEecCCc-chhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEec-CCCHH
Confidence 5699999999999995 579999999987543 345789999999999998877777766 4556779999999 89999
Q ss_pred hhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEe---CCCCCeeEecccccccccccc---
Q 006922 408 AMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFL---NSQQYGCVSDLGLTTITSALA--- 481 (625)
Q Consensus 408 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll---~~~~~~kl~DfGla~~~~~~~--- 481 (625)
+++..... .+++..+..++.|++.||+|||+++ |+||||||+|||+ +.++.+||+|||+++......
T Consensus 93 ~~~~~~~~----~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~ 165 (296)
T 3uzp_A 93 DLFNFCSR----KFSLKTVLLLADQMISRIEYIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQ 165 (296)
T ss_dssp HHHHHTTT----CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCC
T ss_pred HHHHhhcc----CCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccccccc
Confidence 99975432 4899999999999999999999998 9999999999999 488899999999998764321
Q ss_pred -------cccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccccccc
Q 006922 482 -------PVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDV 554 (625)
Q Consensus 482 -------~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 554 (625)
....++..|+|||.+.+..++.++|||||||++|||++|+.||......+.......+..........
T Consensus 166 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~----- 240 (296)
T 3uzp_A 166 HIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIE----- 240 (296)
T ss_dssp BCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHH-----
T ss_pred ccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCchH-----
Confidence 23467888999999999999999999999999999999999998755433333222222111110000
Q ss_pred cccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCCCCCCCCCCCCCC
Q 006922 555 ELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPNDSENRPSSGNKSE 613 (625)
Q Consensus 555 ~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~~~~~~~~~~~~~ 613 (625)
... +. ...++.+++.+||+.||++|||+.|+++.|+++..+.........+|..
T Consensus 241 ~~~--~~---~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~~~~~~~dw~~ 294 (296)
T 3uzp_A 241 VLC--KG---YPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNM 294 (296)
T ss_dssp HHT--TT---SCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTTCCSSCCCGGGG
T ss_pred HHH--hh---CCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcCCcccccccccc
Confidence 000 01 1235778888999999999999999999999998776665555565543
No 96
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.9e-40 Score=334.75 Aligned_cols=245 Identities=21% Similarity=0.343 Sum_probs=199.6
Q ss_pred HcccCCceeEEEEEEc---CCcEEEEEEeccccC--ChHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccCCC
Q 006922 331 VLGKGTFGMAYKAILE---DGTTVVVKRLKDVNV--GKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLGS 405 (625)
Q Consensus 331 ~lg~G~~g~Vy~~~~~---~g~~vavK~l~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 405 (625)
.||+|+||+||+|... ++..||+|+++.... ..+.+.+|++++.+++||||+++++++ ..+..++||||+++++
T Consensus 17 ~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~~~~ 95 (287)
T 1u59_A 17 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGP 95 (287)
T ss_dssp EEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEEEECCTTEE
T ss_pred cccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEEEEeCCCCC
Confidence 6999999999999853 578899999986432 236788999999999999999999999 5567899999999999
Q ss_pred hhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEecccccccccccc----
Q 006922 406 VSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALA---- 481 (625)
Q Consensus 406 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~---- 481 (625)
|.+++.... ..+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 96 L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~ 168 (287)
T 1u59_A 96 LHKFLVGKR----EEIPVSNVAELLHQVSMGMKYLEEKN---FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYT 168 (287)
T ss_dssp HHHHHTTCT----TTSCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEEC
T ss_pred HHHHHHhCC----ccCCHHHHHHHHHHHHHHHHHHHHCC---EeeCCCchheEEEcCCCCEEECcccceeeeccCcceee
Confidence 999997532 24899999999999999999999998 9999999999999999999999999998764321
Q ss_pred --cccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHh-CCCCCCCCCCcchhhHHHHHHHHhhcccccccccccccC
Q 006922 482 --PVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLR 558 (625)
Q Consensus 482 --~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 558 (625)
....++..|+|||.+.+..++.++||||||+++|||+| |+.||......+....+ . ....
T Consensus 169 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i---~---~~~~----------- 231 (287)
T 1u59_A 169 ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFI---E---QGKR----------- 231 (287)
T ss_dssp CCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHH---H---TTCC-----------
T ss_pred ccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHH---h---cCCc-----------
Confidence 12234677999999988889999999999999999999 99999775543332211 1 1100
Q ss_pred CCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCC
Q 006922 559 YPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPN 600 (625)
Q Consensus 559 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~ 600 (625)
.+.......++.+++..||..+|.+||++.|+++.|+.+..+
T Consensus 232 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 273 (287)
T 1u59_A 232 MECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYS 273 (287)
T ss_dssp CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 011112234677888899999999999999999999988554
No 97
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=3e-40 Score=336.59 Aligned_cols=265 Identities=15% Similarity=0.141 Sum_probs=207.0
Q ss_pred HhHcccCCceeEEEEEE-cCCcEEEEEEeccccCChHHHHHHHHHHHcCCCCceecceeEE-EecCceEEEEEeccCCCh
Q 006922 329 AEVLGKGTFGMAYKAIL-EDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYY-YSKDEKLMVYDYYSLGSV 406 (625)
Q Consensus 329 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~-~~~~~~~lv~e~~~~g~L 406 (625)
.+.||+|+||+||+|.. .+++.||||++.... ....+.+|++++..++|++++..++++ ...+..++||||+ +++|
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L 91 (296)
T 4hgt_A 14 GRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT-KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GPSL 91 (296)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEEEEC----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-CCBH
T ss_pred eeeecCCCCeEEEEEEEcCCCceEEEEeecccc-cchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEcc-CCCH
Confidence 35799999999999995 578999999876533 235688999999999998888777766 4566789999999 9999
Q ss_pred hhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEe---CCCCCeeEecccccccccccc--
Q 006922 407 SAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFL---NSQQYGCVSDLGLTTITSALA-- 481 (625)
Q Consensus 407 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll---~~~~~~kl~DfGla~~~~~~~-- 481 (625)
.+++..... .+++..+..++.|++.||+|||+.+ |+||||||+|||+ +.++.+||+|||+++......
T Consensus 92 ~~~~~~~~~----~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~ 164 (296)
T 4hgt_A 92 EDLFNFCSR----KFSLKTVLLLADQMISRIEYIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTH 164 (296)
T ss_dssp HHHHHHTTS----CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTTC
T ss_pred HHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeeeeccCCCCeEEEecCccceeccCcccC
Confidence 999975432 4899999999999999999999998 9999999999999 788999999999998764322
Q ss_pred --------cccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhccccccccc
Q 006922 482 --------PVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFD 553 (625)
Q Consensus 482 --------~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 553 (625)
....++..|+|||.+.+..++.++|||||||++|||++|+.||..............+............
T Consensus 165 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 242 (296)
T 4hgt_A 165 QHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL-- 242 (296)
T ss_dssp CBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHH--
T ss_pred ccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccchhhhh--
Confidence 2346788899999999999999999999999999999999999876544433333322211111000000
Q ss_pred ccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCCCCCCCCCCCCC
Q 006922 554 VELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPNDSENRPSSGNKS 612 (625)
Q Consensus 554 ~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~~~~~~~~~~~~ 612 (625)
. .. ...++.+++..||+.+|++|||++|+++.|+++..+...+.....+|.
T Consensus 243 ----~-~~---~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~~~~~~~~dw~ 293 (296)
T 4hgt_A 243 ----C-KG---YPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWN 293 (296)
T ss_dssp ----T-TT---SCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHTCCTTCCCGGG
T ss_pred ----h-cc---CCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhCCCccCccchh
Confidence 0 00 123677888899999999999999999999999877665555555554
No 98
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=2.9e-40 Score=339.73 Aligned_cols=253 Identities=24% Similarity=0.383 Sum_probs=203.8
Q ss_pred HhHcccCCceeEEEEEE------cCCcEEEEEEeccccC--ChHHHHHHHHHHHcC-CCCceecceeEEEecCceEEEEE
Q 006922 329 AEVLGKGTFGMAYKAIL------EDGTTVVVKRLKDVNV--GKRDFEQQMEIVGSI-RHENVVELKAYYYSKDEKLMVYD 399 (625)
Q Consensus 329 ~~~lg~G~~g~Vy~~~~------~~g~~vavK~l~~~~~--~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e 399 (625)
.+.||+|+||+||+|.. .+++.||+|+++.... ..+.+.+|++++.++ +||||+++++++...+..++|||
T Consensus 28 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e 107 (313)
T 1t46_A 28 GKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITE 107 (313)
T ss_dssp EEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred HHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCCcEEEEe
Confidence 35799999999999984 3468999999986532 236789999999999 89999999999999999999999
Q ss_pred eccCCChhhhhccccCC-------------CCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCe
Q 006922 400 YYSLGSVSAMLHSERGE-------------GRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYG 466 (625)
Q Consensus 400 ~~~~g~L~~~l~~~~~~-------------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ 466 (625)
|+++|+|.+++...... ....+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+
T Consensus 108 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~ 184 (313)
T 1t46_A 108 YCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRIT 184 (313)
T ss_dssp CCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEETTTEE
T ss_pred cCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCccceEEEcCCCCE
Confidence 99999999999865421 1234899999999999999999999998 9999999999999999999
Q ss_pred eEeccccccccccccc-----ccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHh-CCCCCCCCCCcchhhHHHHHH
Q 006922 467 CVSDLGLTTITSALAP-----VIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVH 540 (625)
Q Consensus 467 kl~DfGla~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~ 540 (625)
||+|||+++....... ...++..|+|||.+.+..++.++||||||+++|||+| |+.||......+.. ...+.
T Consensus 185 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~--~~~~~ 262 (313)
T 1t46_A 185 KICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKF--YKMIK 262 (313)
T ss_dssp EECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHH--HHHHH
T ss_pred EEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhHH--HHHhc
Confidence 9999999987654321 2345667999999988899999999999999999999 99999765543221 11111
Q ss_pred HHhhcccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCC
Q 006922 541 SVVREEWTAEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPN 600 (625)
Q Consensus 541 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~ 600 (625)
.... .........++.+++.+||+.||.+|||+.|+++.|+++..+
T Consensus 263 ----~~~~----------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 308 (313)
T 1t46_A 263 ----EGFR----------MLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISE 308 (313)
T ss_dssp ----HTCC----------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ----cCCC----------CCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence 1100 000111234677888899999999999999999999987654
No 99
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=1.4e-40 Score=354.08 Aligned_cols=240 Identities=18% Similarity=0.230 Sum_probs=194.4
Q ss_pred hHcccCCceeEEEEEEc-CCcEEEEEEecccc----CChHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccCC
Q 006922 330 EVLGKGTFGMAYKAILE-DGTTVVVKRLKDVN----VGKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLG 404 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 404 (625)
+.||+|+||+||+|+.. +++.||+|++++.. ...+.+.+|++++..++|||||++++++.+.+..++||||+++|
T Consensus 75 ~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~~~gg 154 (410)
T 3v8s_A 75 KVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGG 154 (410)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTE
T ss_pred EEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCC
Confidence 57999999999999965 58999999997532 22356889999999999999999999999999999999999999
Q ss_pred ChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEeccccccccccc----
Q 006922 405 SVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSAL---- 480 (625)
Q Consensus 405 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~---- 480 (625)
+|.+++... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 155 ~L~~~l~~~------~~~e~~~~~~~~qi~~aL~~LH~~g---ivHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~~~~ 225 (410)
T 3v8s_A 155 DLVNLMSNY------DVPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVR 225 (410)
T ss_dssp EHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCTTSEEE
T ss_pred cHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeeECCCCCEEEeccceeEeeccCCccc
Confidence 999998753 2889999999999999999999998 999999999999999999999999999876543
Q ss_pred ccccccCCCcCCccccCCCC----CCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccccccccc
Q 006922 481 APVIARAAGYRAPEVTDSRK----ATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVEL 556 (625)
Q Consensus 481 ~~~~~~~~~y~aPE~~~~~~----~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 556 (625)
.....||+.|+|||++.+.. ++.++|||||||++|||++|+.||...+..+....+. .... ....
T Consensus 226 ~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~------~~~~-----~~~~ 294 (410)
T 3v8s_A 226 CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIM------NHKN-----SLTF 294 (410)
T ss_dssp CCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHH------THHH-----HCCC
T ss_pred ccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHH------hccc-----cccC
Confidence 22457899999999997665 7899999999999999999999997654332222111 1000 0000
Q ss_pred cCCCCcHHHHHHHHHHHHHccCCCCCC--CCCHHHHHH
Q 006922 557 LRYPNIEEEMVEMLQIAMSCVVRMPDQ--RPKMPDVVR 592 (625)
Q Consensus 557 ~~~~~~~~~~~~l~~l~~~Cl~~~P~~--RPs~~ev~~ 592 (625)
...... ..++.+++.+|+..+|.+ ||+++||++
T Consensus 295 p~~~~~---s~~~~~li~~lL~~~~~rlgR~~~~ei~~ 329 (410)
T 3v8s_A 295 PDDNDI---SKEAKNLICAFLTDREVRLGRNGVEEIKR 329 (410)
T ss_dssp CTTCCC---CHHHHHHHHHHSSCGGGCTTSSCHHHHHT
T ss_pred CCcccc---cHHHHHHHHHHccChhhhCCCCCHHHHhc
Confidence 111112 235567777999999988 999999986
No 100
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=3.4e-40 Score=342.82 Aligned_cols=252 Identities=24% Similarity=0.375 Sum_probs=201.4
Q ss_pred HhHcccCCceeEEEEEE--------cCCcEEEEEEeccccC--ChHHHHHHHHHHHcC-CCCceecceeEEEecCceEEE
Q 006922 329 AEVLGKGTFGMAYKAIL--------EDGTTVVVKRLKDVNV--GKRDFEQQMEIVGSI-RHENVVELKAYYYSKDEKLMV 397 (625)
Q Consensus 329 ~~~lg~G~~g~Vy~~~~--------~~g~~vavK~l~~~~~--~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv 397 (625)
.+.||+|+||+||+|.. .++..||+|+++.... ..+.+.+|++++.++ +||||+++++++...+..++|
T Consensus 40 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 119 (334)
T 2pvf_A 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVI 119 (334)
T ss_dssp EEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCCEEE
T ss_pred eeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccCCceEEE
Confidence 36799999999999985 3467899999986432 235688999999999 899999999999999999999
Q ss_pred EEeccCCChhhhhccccCC-----------CCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCe
Q 006922 398 YDYYSLGSVSAMLHSERGE-----------GRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYG 466 (625)
Q Consensus 398 ~e~~~~g~L~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~ 466 (625)
|||+++|+|.+++...... ....+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+
T Consensus 120 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~ 196 (334)
T 2pvf_A 120 VEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDLAARNVLVTENNVM 196 (334)
T ss_dssp EECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCE
T ss_pred EECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCccceEEEcCCCCE
Confidence 9999999999999865421 1124899999999999999999999998 9999999999999999999
Q ss_pred eEecccccccccccc-----cccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHh-CCCCCCCCCCcchhhHHHHHH
Q 006922 467 CVSDLGLTTITSALA-----PVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVH 540 (625)
Q Consensus 467 kl~DfGla~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~ 540 (625)
||+|||+++...... ....++..|+|||++.+..++.++||||||+++|||++ |+.||......+.. ..+.
T Consensus 197 kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~---~~~~ 273 (334)
T 2pvf_A 197 KIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF---KLLK 273 (334)
T ss_dssp EECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHH---HHHH
T ss_pred EEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHHH---HHHh
Confidence 999999998764321 22345667999999988889999999999999999999 99999765433222 2111
Q ss_pred HHhhcccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCC
Q 006922 541 SVVREEWTAEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPN 600 (625)
Q Consensus 541 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~ 600 (625)
. .... +.......++.+++.+||..+|.+||++.|+++.|+.+...
T Consensus 274 ~----~~~~----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~ 319 (334)
T 2pvf_A 274 E----GHRM----------DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 319 (334)
T ss_dssp H----TCCC----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred c----CCCC----------CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 1 1000 01112234677888899999999999999999999998654
No 101
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=7.4e-40 Score=341.52 Aligned_cols=239 Identities=18% Similarity=0.302 Sum_probs=190.6
Q ss_pred hHcccCCceeEEEEEEc-CCcEEEEEEeccccCC----hHHHHHHHHHHHcC-CCCceecceeEEEecCceEEEEEeccC
Q 006922 330 EVLGKGTFGMAYKAILE-DGTTVVVKRLKDVNVG----KRDFEQQMEIVGSI-RHENVVELKAYYYSKDEKLMVYDYYSL 403 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~----~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 403 (625)
+.||+|+||+||+++.. +++.||+|+++..... .+.+.+|.+++.++ +||||+++++++.+.+..++||||+++
T Consensus 15 ~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~e~~~g 94 (345)
T 3a8x_A 15 RVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 94 (345)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred EEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEEEeCCCC
Confidence 57999999999999965 6899999999865332 24577899999888 899999999999999999999999999
Q ss_pred CChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEeccccccccc---cc
Q 006922 404 GSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITS---AL 480 (625)
Q Consensus 404 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~---~~ 480 (625)
|+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++... ..
T Consensus 95 g~L~~~l~~~~-----~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~~~ 166 (345)
T 3a8x_A 95 GDLMFHMQRQR-----KLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT 166 (345)
T ss_dssp CBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTTCC
T ss_pred CcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEECCCCCEEEEeccccccccCCCCc
Confidence 99999997643 3899999999999999999999998 9999999999999999999999999998642 22
Q ss_pred ccccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchh--hHHHHHHHHhhcccccccccccccC
Q 006922 481 APVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELV--HLVRWVHSVVREEWTAEVFDVELLR 558 (625)
Q Consensus 481 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~d~~~~~ 558 (625)
.....||..|+|||++.+..++.++||||+||++|||++|+.||......+.. .....+...+..... .
T Consensus 167 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~---------~ 237 (345)
T 3a8x_A 167 TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI---------R 237 (345)
T ss_dssp BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCC---------C
T ss_pred ccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCC---------C
Confidence 33457899999999999999999999999999999999999999753321110 001111111111100 0
Q ss_pred CCCcHHHHHHHHHHHHHccCCCCCCCCCH
Q 006922 559 YPNIEEEMVEMLQIAMSCVVRMPDQRPKM 587 (625)
Q Consensus 559 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~ 587 (625)
.+ .....++.+++.+||+.||.+||++
T Consensus 238 ~p--~~~s~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 238 IP--RSLSVKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp CC--TTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred CC--CCCCHHHHHHHHHHhcCCHhHCCCC
Confidence 11 1122356778889999999999996
No 102
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=8.2e-40 Score=338.95 Aligned_cols=238 Identities=19% Similarity=0.338 Sum_probs=190.5
Q ss_pred hHcccCCceeEEEEEEc-CCcEEEEEEeccccC--ChHHHHHHHHHHHcCCCCceecceeEEEecCc-------------
Q 006922 330 EVLGKGTFGMAYKAILE-DGTTVVVKRLKDVNV--GKRDFEQQMEIVGSIRHENVVELKAYYYSKDE------------- 393 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~------------- 393 (625)
+.||+|+||+||+|+.. +|+.||||+++.... ..+.+.+|++++.+++||||++++++|.+...
T Consensus 12 ~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~~~~ 91 (332)
T 3qd2_B 12 QCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEMDEIWLK 91 (332)
T ss_dssp EEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHHHC----
T ss_pred eEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhhhhhhhc
Confidence 57999999999999975 799999999975432 34679999999999999999999999866432
Q ss_pred --------------------------------------------eEEEEEeccCCChhhhhccccCCCCccCCHHHHHHH
Q 006922 394 --------------------------------------------KLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTRMRI 429 (625)
Q Consensus 394 --------------------------------------------~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i 429 (625)
.++||||+++|+|.+++..... .....+..+..+
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~i 169 (332)
T 3qd2_B 92 DESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCS--LEDREHGVCLHI 169 (332)
T ss_dssp ----------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCS--GGGSCHHHHHHH
T ss_pred cccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccC--ccchhhHHHHHH
Confidence 7999999999999999986532 334678889999
Q ss_pred HHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEecccccccccccc---------------cccccCCCcCCcc
Q 006922 430 AIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALA---------------PVIARAAGYRAPE 494 (625)
Q Consensus 430 ~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~---------------~~~~~~~~y~aPE 494 (625)
+.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...... ....+|..|+|||
T Consensus 170 ~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE 246 (332)
T 3qd2_B 170 FIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPE 246 (332)
T ss_dssp HHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGGSCHH
T ss_pred HHHHHHHHHHHHhCC---eeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCccChH
Confidence 999999999999998 9999999999999999999999999998765321 2235788899999
Q ss_pred ccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccccccccccCCC-CcHHHHHHHHHHH
Q 006922 495 VTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYP-NIEEEMVEMLQIA 573 (625)
Q Consensus 495 ~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~~~~~~l~~l~ 573 (625)
++.+..++.++|||||||++|||++|..|+. +......... .. ..+ .......++.+++
T Consensus 247 ~~~~~~~~~~~Di~slG~il~el~~~~~~~~-----~~~~~~~~~~----~~-----------~~~~~~~~~~~~~~~li 306 (332)
T 3qd2_B 247 QIHGNNYSHKVDIFSLGLILFELLYSFSTQM-----ERVRIITDVR----NL-----------KFPLLFTQKYPQEHMMV 306 (332)
T ss_dssp HHHCCCCCTHHHHHHHHHHHHHHHSCCCCHH-----HHHHHHHHHH----TT-----------CCCHHHHHHCHHHHHHH
T ss_pred HhcCCCCcchhhHHHHHHHHHHHHHcCCChh-----HHHHHHHHhh----cc-----------CCCcccccCChhHHHHH
Confidence 9999999999999999999999999877652 1111111111 10 001 1122334567888
Q ss_pred HHccCCCCCCCCCHHHHHH
Q 006922 574 MSCVVRMPDQRPKMPDVVR 592 (625)
Q Consensus 574 ~~Cl~~~P~~RPs~~ev~~ 592 (625)
.+||+.||++|||+.|+++
T Consensus 307 ~~~l~~~p~~Rps~~~~l~ 325 (332)
T 3qd2_B 307 QDMLSPSPTERPEATDIIE 325 (332)
T ss_dssp HHHHCSSGGGSCCHHHHHH
T ss_pred HHHccCCCCcCCCHHHHhh
Confidence 9999999999999999986
No 103
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=3.4e-40 Score=341.78 Aligned_cols=246 Identities=20% Similarity=0.374 Sum_probs=194.8
Q ss_pred hHcccCCceeEEEEEEc-CCc----EEEEEEecccc--CChHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEecc
Q 006922 330 EVLGKGTFGMAYKAILE-DGT----TVVVKRLKDVN--VGKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYS 402 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~-~g~----~vavK~l~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 402 (625)
+.||+|+||+||+|... +++ .||+|.+.... ...+.+.+|++++.+++||||+++++++.... .++|+||++
T Consensus 21 ~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~v~~~~~ 99 (327)
T 3lzb_A 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMP 99 (327)
T ss_dssp EEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EEEEECCCS
T ss_pred EEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ceEEEEecC
Confidence 57999999999999953 454 35777776432 24577999999999999999999999998754 889999999
Q ss_pred CCChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEecccccccccccc-
Q 006922 403 LGSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALA- 481 (625)
Q Consensus 403 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~- 481 (625)
+|+|.+++..... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 100 ~g~L~~~l~~~~~----~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~~ 172 (327)
T 3lzb_A 100 FGCLLDYVREHKD----NIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK 172 (327)
T ss_dssp SCBHHHHHHHTTT----CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEETTEEEECCTTC---------
T ss_pred CCcHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHhhCC---CcCCCCCHHHEEEcCCCCEEEccCcceeEccCccc
Confidence 9999999986532 4899999999999999999999998 9999999999999999999999999998764321
Q ss_pred ----cccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHh-CCCCCCCCCCcchhhHHHHHHHHhhcccccccccccc
Q 006922 482 ----PVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVEL 556 (625)
Q Consensus 482 ----~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 556 (625)
....++..|+|||.+.+..++.++|||||||++|||++ |+.||......+....+. ...
T Consensus 173 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~-------~~~--------- 236 (327)
T 3lzb_A 173 EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE-------KGE--------- 236 (327)
T ss_dssp -------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHH-------TTC---------
T ss_pred cccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH-------cCC---------
Confidence 12234567999999999999999999999999999999 999998765544333221 100
Q ss_pred cCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCC
Q 006922 557 LRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPN 600 (625)
Q Consensus 557 ~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~ 600 (625)
..+.......++.+++.+||..||.+||++.|+++.|+++...
T Consensus 237 -~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 279 (327)
T 3lzb_A 237 -RLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp -CCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTS
T ss_pred -CCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence 0111112234677888899999999999999999999988654
No 104
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=1.7e-40 Score=335.81 Aligned_cols=247 Identities=23% Similarity=0.383 Sum_probs=194.2
Q ss_pred HhHcccCCceeEEEEEEcCCcEEEEEEeccccCChHHHHHHHHHHHcCCCCceecceeEEEec-CceEEEEEeccCCChh
Q 006922 329 AEVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYYSK-DEKLMVYDYYSLGSVS 407 (625)
Q Consensus 329 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-~~~~lv~e~~~~g~L~ 407 (625)
.+.||+|+||+||++... |+.||+|+++... ..+.+.+|++++.+++||||+++++++... +..++||||+++++|.
T Consensus 26 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L~ 103 (278)
T 1byg_A 26 LQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLV 103 (278)
T ss_dssp EEEEEECSSCEEEEEEET-TEEEEEEECCCCC---HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCTTEEHH
T ss_pred EeEEecCCCceEEEEEEc-CCEEEEEEecchh-HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecCCCCCHH
Confidence 357999999999999875 8999999997643 456789999999999999999999997654 4789999999999999
Q ss_pred hhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEecccccccccccccccccC
Q 006922 408 AMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARA 487 (625)
Q Consensus 408 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~ 487 (625)
+++.... ...+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||++...........++
T Consensus 104 ~~l~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~ 177 (278)
T 1byg_A 104 DYLRSRG---RSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLP 177 (278)
T ss_dssp HHHHHHH---HHHCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTSCEEECCCCC------------CC
T ss_pred HHHHhcc---cccCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCCcceEEEeCCCcEEEeeccccccccccccCCCcc
Confidence 9997542 123789999999999999999999998 9999999999999999999999999998766554445677
Q ss_pred CCcCCccccCCCCCCCccchhhhHHHHHHHHh-CCCCCCCCCCcchhhHHHHHHHHhhcccccccccccccCCCCcHHHH
Q 006922 488 AGYRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIEEEM 566 (625)
Q Consensus 488 ~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 566 (625)
..|+|||.+.+..++.++||||||+++|||+| |+.||......+....+ .... . ........
T Consensus 178 ~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~-------~~~~-----~-----~~~~~~~~ 240 (278)
T 1byg_A 178 VKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRV-------EKGY-----K-----MDAPDGCP 240 (278)
T ss_dssp TTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHH-------TTTC-----C-----CCCCTTCC
T ss_pred ccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH-------hcCC-----C-----CCCcccCC
Confidence 88999999988889999999999999999999 99999765443322211 1110 0 01111223
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCC
Q 006922 567 VEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPN 600 (625)
Q Consensus 567 ~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~ 600 (625)
..+.+++.+||+.||.+||++.|+++.|+.++..
T Consensus 241 ~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~ 274 (278)
T 1byg_A 241 PAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTH 274 (278)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhh
Confidence 4677788899999999999999999999988643
No 105
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=2e-40 Score=343.13 Aligned_cols=245 Identities=16% Similarity=0.315 Sum_probs=177.3
Q ss_pred hHcccCCceeEEEEEEc-CCcEEEEEEeccccCChHHHHHHHHHHHcCC-CCceecceeEEEecCceEEEEEeccCCChh
Q 006922 330 EVLGKGTFGMAYKAILE-DGTTVVVKRLKDVNVGKRDFEQQMEIVGSIR-HENVVELKAYYYSKDEKLMVYDYYSLGSVS 407 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~~g~L~ 407 (625)
+.||+|+||+||++... +|+.||||++... ....+.+|++++..++ ||||+++++++.+.+..++||||+++|+|.
T Consensus 17 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~ 94 (325)
T 3kn6_A 17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKR--MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELF 94 (325)
T ss_dssp CCSEEETTEEEEEEEETTTCCEEEEEEEEGG--GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBHH
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEChh--hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcHH
Confidence 56999999999999965 6899999999753 2467889999999997 999999999999999999999999999999
Q ss_pred hhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCC---CeeEecccccccccccc---
Q 006922 408 AMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQ---YGCVSDLGLTTITSALA--- 481 (625)
Q Consensus 408 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~---~~kl~DfGla~~~~~~~--- 481 (625)
+++.... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++ .+||+|||+++......
T Consensus 95 ~~l~~~~-----~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~ 166 (325)
T 3kn6_A 95 ERIKKKK-----HFSETEASYIMRKLVSAVSHMHDVG---VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPL 166 (325)
T ss_dssp HHHHHCS-----CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEC----CEEEECCCTTCEECCC-----
T ss_pred HHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---CeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCcc
Confidence 9998643 4899999999999999999999998 99999999999998766 79999999998654322
Q ss_pred cccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchh-hHHHHHHHHhhcccccccccccccCCC
Q 006922 482 PVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELV-HLVRWVHSVVREEWTAEVFDVELLRYP 560 (625)
Q Consensus 482 ~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~~~~~~~ 560 (625)
....+|..|+|||++.+..++.++|||||||++|||++|+.||......... ...+.......... . +.. +
T Consensus 167 ~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~-~--~~~-----~ 238 (325)
T 3kn6_A 167 KTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDF-S--FEG-----E 238 (325)
T ss_dssp -----------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCC-C--CCS-----H
T ss_pred cccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCC-C--CCc-----c
Confidence 2345788899999999999999999999999999999999999765432111 11111111111110 0 000 0
Q ss_pred CcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006922 561 NIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR 592 (625)
Q Consensus 561 ~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 592 (625)
.......++.+++.+|+..||.+|||++|+++
T Consensus 239 ~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 270 (325)
T 3kn6_A 239 AWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRY 270 (325)
T ss_dssp HHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred cccCCCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence 00112346778888999999999999999864
No 106
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.6e-40 Score=345.26 Aligned_cols=267 Identities=11% Similarity=0.102 Sum_probs=206.5
Q ss_pred hHcccCCceeEEEEEEc---------CCcEEEEEEeccccCChHHHHHHHHHHHcCCCCceec---------------ce
Q 006922 330 EVLGKGTFGMAYKAILE---------DGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVE---------------LK 385 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~---------~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~---------------l~ 385 (625)
+.||+|+||+||+|... +++.||+|++... +.+.+|++++.+++||||++ ++
T Consensus 48 ~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~i~~~~ 123 (352)
T 2jii_A 48 SFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLAIPTCM 123 (352)
T ss_dssp EEEEEETTEEEEEEEECC-----------CEEEEEEETT----STHHHHHHHHHHHCCHHHHHHHHHHTTCTTCSCCCCC
T ss_pred EEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc----chHHHHHHHHHHhcccchhhhhhhhccCCccCccchh
Confidence 56999999999999965 3789999999753 57889999999999999988 67
Q ss_pred eEEEe-cCceEEEEEeccCCChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCC
Q 006922 386 AYYYS-KDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQ 464 (625)
Q Consensus 386 ~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~ 464 (625)
+++.. .+..++||||+ +++|.+++.... ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++
T Consensus 124 ~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~---~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dikp~NIl~~~~~ 196 (352)
T 2jii_A 124 GFGVHQDKYRFLVLPSL-GRSLQSALDVSP---KHVLSERSVLQVACRLLDALEFLHENE---YVHGNVTAENIFVDPED 196 (352)
T ss_dssp EEEEETTTEEEEEEECC-CEEHHHHHHHSG---GGCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCCGGGEEEETTE
T ss_pred hccccCCcEEEEEecCC-CcCHHHHHHhCC---cCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCHHHEEEcCCC
Confidence 77776 67889999999 999999998652 124999999999999999999999998 99999999999999998
Q ss_pred --CeeEecccccccccccc----------cccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcch
Q 006922 465 --YGCVSDLGLTTITSALA----------PVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDEL 532 (625)
Q Consensus 465 --~~kl~DfGla~~~~~~~----------~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~ 532 (625)
.+||+|||+++...... ....++..|+|||++.+..++.++|||||||++|||++|+.||.......
T Consensus 197 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~- 275 (352)
T 2jii_A 197 QSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNT- 275 (352)
T ss_dssp EEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCH-
T ss_pred CceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcCH-
Confidence 89999999997654321 22367889999999999899999999999999999999999998654221
Q ss_pred hhHHHHHHHHhhcccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCCCCCCCCCCCCC
Q 006922 533 VHLVRWVHSVVREEWTAEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPNDSENRPSSGNKS 612 (625)
Q Consensus 533 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~~~~~~~~~~~~ 612 (625)
.......... ... .....+... .......++.+++.+||..||++||+++|+++.|+++............+|.
T Consensus 276 ~~~~~~~~~~-~~~-~~~~~~~~~----~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~~~~~~~dw~ 349 (352)
T 2jii_A 276 EDIMKQKQKF-VDK-PGPFVGPCG----HWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLRVSPYDPIGLP 349 (352)
T ss_dssp HHHHHHHHHH-HHS-CCCEECTTS----CEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCCTTSCCCCC
T ss_pred HHHHHHHHhc-cCC-hhhhhhhcc----ccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcCCCcCccccCc
Confidence 1111111111 111 111111000 0001124577788899999999999999999999999887766666666665
Q ss_pred CC
Q 006922 613 ES 614 (625)
Q Consensus 613 ~~ 614 (625)
..
T Consensus 350 ~~ 351 (352)
T 2jii_A 350 MV 351 (352)
T ss_dssp C-
T ss_pred CC
Confidence 43
No 107
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=8e-40 Score=338.99 Aligned_cols=237 Identities=21% Similarity=0.313 Sum_probs=186.9
Q ss_pred hHcccCCceeEEEEEE----cCCcEEEEEEeccccC-----ChHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEe
Q 006922 330 EVLGKGTFGMAYKAIL----EDGTTVVVKRLKDVNV-----GKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDY 400 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~----~~g~~vavK~l~~~~~-----~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 400 (625)
+.||+|+||+||+++. .+|+.||+|+++.... ....+.+|++++.+++||||+++++++...+..++||||
T Consensus 23 ~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 102 (327)
T 3a62_A 23 RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEY 102 (327)
T ss_dssp EEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred EEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCEEEEEEeC
Confidence 5799999999999996 4789999999986432 234578899999999999999999999999999999999
Q ss_pred ccCCChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEeccccccccccc
Q 006922 401 YSLGSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSAL 480 (625)
Q Consensus 401 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~ 480 (625)
+++|+|.+++.... .+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 103 ~~~~~L~~~l~~~~-----~~~~~~~~~~~~qi~~al~~lH~~~---ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 174 (327)
T 3a62_A 103 LSGGELFMQLEREG-----IFMEDTACFYLAEISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHD 174 (327)
T ss_dssp CTTEEHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCTTTEEECTTSCEEECCCSCC------
T ss_pred CCCCcHHHHHHhCC-----CCCHHHHHHHHHHHHHHHHHHHhCC---EEcccCCHHHeEECCCCcEEEEeCCcccccccC
Confidence 99999999997643 3889999999999999999999998 999999999999999999999999999764322
Q ss_pred ---ccccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhccccccccccccc
Q 006922 481 ---APVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELL 557 (625)
Q Consensus 481 ---~~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 557 (625)
.....||..|+|||++.+..++.++|||||||++|||++|+.||......+.. .. ..... .
T Consensus 175 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~---~~---i~~~~---------~- 238 (327)
T 3a62_A 175 GTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTI---DK---ILKCK---------L- 238 (327)
T ss_dssp ----CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH---HH---HHHTC---------C-
T ss_pred CccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHH---HH---HHhCC---------C-
Confidence 23456889999999999999999999999999999999999999765432221 11 11111 0
Q ss_pred CCCCcHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 006922 558 RYPNIEEEMVEMLQIAMSCVVRMPDQRP-----KMPDVVR 592 (625)
Q Consensus 558 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RP-----s~~ev~~ 592 (625)
..+ .....++.+++.+||..||++|| ++.|+++
T Consensus 239 ~~p--~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 239 NLP--PYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp CCC--TTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred CCC--CCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence 001 11223567788899999999999 6778765
No 108
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=1e-39 Score=340.74 Aligned_cols=255 Identities=18% Similarity=0.208 Sum_probs=192.4
Q ss_pred hHcccCCceeEEEEEEc----CCcEEEEEEeccccC------------ChHHHHHHHHHHHcCCCCceecceeEEEe---
Q 006922 330 EVLGKGTFGMAYKAILE----DGTTVVVKRLKDVNV------------GKRDFEQQMEIVGSIRHENVVELKAYYYS--- 390 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~----~g~~vavK~l~~~~~------------~~~~~~~e~~~l~~l~h~niv~l~~~~~~--- 390 (625)
+.||+|+||+||+|... ++..+|+|++..... ....+.+|+..+..++||||+++++++..
T Consensus 43 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~~~~~~~ 122 (345)
T 2v62_A 43 KKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGLTEFK 122 (345)
T ss_dssp EEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEEEEEESS
T ss_pred eeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecccccccC
Confidence 57999999999999964 578899999875432 12346678888999999999999999988
Q ss_pred -cCceEEEEEeccCCChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCC--Cee
Q 006922 391 -KDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQ--YGC 467 (625)
Q Consensus 391 -~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~--~~k 467 (625)
....++||||+ +++|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++ .+|
T Consensus 123 ~~~~~~lv~e~~-~~~L~~~l~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~~~k 193 (345)
T 2v62_A 123 GRSYRFMVMERL-GIDLQKISGQNG-----TFKKSTVLQLGIRMLDVLEYIHENE---YVHGDIKAANLLLGYKNPDQVY 193 (345)
T ss_dssp SCEEEEEEEECE-EEEHHHHCBGGG-----BCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEESSSTTSEE
T ss_pred CCcEEEEEEecc-CCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCcCHHHEEEccCCCCcEE
Confidence 67889999999 999999998653 4899999999999999999999998 99999999999999887 999
Q ss_pred Eecccccccccccc----------cccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHH
Q 006922 468 VSDLGLTTITSALA----------PVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVR 537 (625)
Q Consensus 468 l~DfGla~~~~~~~----------~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~ 537 (625)
|+|||+++...... ....++..|+|||++.+..++.++|||||||++|||+||+.||......... ..
T Consensus 194 L~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~--~~ 271 (345)
T 2v62_A 194 LADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVA--VQ 271 (345)
T ss_dssp ECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHH--HH
T ss_pred EEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHH--HH
Confidence 99999997653221 2346788999999999989999999999999999999999999653322211 11
Q ss_pred HHHHHhhcccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCC
Q 006922 538 WVHSVVREEWTAEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPN 600 (625)
Q Consensus 538 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~ 600 (625)
.............+.+ ... ......++.+++.+||..||++||++.||++.|+.....
T Consensus 272 ~~~~~~~~~~~~~~~~-~~~----~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~ 329 (345)
T 2v62_A 272 TAKTNLLDELPQSVLK-WAP----SGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGIP 329 (345)
T ss_dssp HHHHHHHHTTTHHHHH-HSC----TTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCCC
T ss_pred HHHHhhcccccHHHHh-hcc----ccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCCc
Confidence 1111111111000000 000 001223677888899999999999999999999887653
No 109
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=5.4e-40 Score=343.03 Aligned_cols=239 Identities=22% Similarity=0.391 Sum_probs=193.2
Q ss_pred hHcccCCceeEEEEEE-cCCcEEEEEEeccccCC----hHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccCC
Q 006922 330 EVLGKGTFGMAYKAIL-EDGTTVVVKRLKDVNVG----KRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLG 404 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~----~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 404 (625)
+.||+|+||+||+|.. .+|+.||||++...... .+.+.+|++++.+++||||+++++++...+..++||||+. |
T Consensus 60 ~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~-g 138 (348)
T 1u5q_A 60 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL-G 138 (348)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCS-E
T ss_pred eEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEEecCC-C
Confidence 5699999999999995 57999999999754322 2468899999999999999999999999999999999998 5
Q ss_pred ChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEeccccccccccccccc
Q 006922 405 SVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVI 484 (625)
Q Consensus 405 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~ 484 (625)
++.+++.... ..+++..+..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++..... ...
T Consensus 139 ~l~~~l~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~-~~~ 210 (348)
T 1u5q_A 139 SASDLLEVHK----KPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA-NSF 210 (348)
T ss_dssp EHHHHHHHHT----SCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB-CCC
T ss_pred CHHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEeeccCceecCCC-Ccc
Confidence 8888776443 24899999999999999999999998 999999999999999999999999999876543 345
Q ss_pred ccCCCcCCccccC---CCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccccccccccCCCC
Q 006922 485 ARAAGYRAPEVTD---SRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPN 561 (625)
Q Consensus 485 ~~~~~y~aPE~~~---~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 561 (625)
.+|..|+|||++. ...++.++|||||||++|||++|+.||......+.. ........ . ... ...
T Consensus 211 ~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~------~~~~~~~~-~-----~~~-~~~ 277 (348)
T 1u5q_A 211 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSAL------YHIAQNES-P-----ALQ-SGH 277 (348)
T ss_dssp CSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH------HHHHHSCC-C-----CCC-CTT
T ss_pred cCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHH------HHHHhcCC-C-----CCC-CCC
Confidence 7889999999984 567899999999999999999999999764322211 11111110 0 000 011
Q ss_pred cHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006922 562 IEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRV 593 (625)
Q Consensus 562 ~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 593 (625)
....+.+++.+||+.||++|||+.|+++.
T Consensus 278 ---~~~~l~~li~~~l~~dP~~Rps~~~ll~h 306 (348)
T 1u5q_A 278 ---WSEYFRNFVDSCLQKIPQDRPTSEVLLKH 306 (348)
T ss_dssp ---SCHHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred ---CCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 12356678889999999999999999864
No 110
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=3.9e-40 Score=340.34 Aligned_cols=254 Identities=21% Similarity=0.330 Sum_probs=203.2
Q ss_pred HhHcccCCceeEEEEEEc------CCcEEEEEEeccccCC--hHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEe
Q 006922 329 AEVLGKGTFGMAYKAILE------DGTTVVVKRLKDVNVG--KRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDY 400 (625)
Q Consensus 329 ~~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~--~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 400 (625)
.+.||+|+||+||+|... +++.||+|++...... ...+.+|++++.+++||||+++++++.+.+..++||||
T Consensus 30 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 109 (322)
T 1p4o_A 30 SRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMEL 109 (322)
T ss_dssp EEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred eeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCccEEEEEe
Confidence 357999999999999853 3788999999764332 34688999999999999999999999999999999999
Q ss_pred ccCCChhhhhccccC-----CCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEecccccc
Q 006922 401 YSLGSVSAMLHSERG-----EGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTT 475 (625)
Q Consensus 401 ~~~g~L~~~l~~~~~-----~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~ 475 (625)
+++|+|.+++..... .....+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++
T Consensus 110 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~NIli~~~~~~kl~Dfg~~~ 186 (322)
T 1p4o_A 110 MTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTR 186 (322)
T ss_dssp CTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCSGGGEEECTTCCEEECCTTCCC
T ss_pred CCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCC---CccCCCccceEEEcCCCeEEECcCcccc
Confidence 999999999976421 11234789999999999999999999998 9999999999999999999999999998
Q ss_pred cccccc-----cccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHh-CCCCCCCCCCcchhhHHHHHHHHhhccccc
Q 006922 476 ITSALA-----PVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTA 549 (625)
Q Consensus 476 ~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 549 (625)
...... ....++..|+|||.+.+..++.++||||||+++|||++ |+.||......+.. ..+ ..... .
T Consensus 187 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~---~~~---~~~~~-~ 259 (322)
T 1p4o_A 187 DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL---RFV---MEGGL-L 259 (322)
T ss_dssp GGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHH---HHH---HTTCC-C
T ss_pred ccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHHH---HHH---HcCCc-C
Confidence 654322 12245677999999988889999999999999999999 89999765432222 111 11110 0
Q ss_pred ccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCCC
Q 006922 550 EVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPNDS 602 (625)
Q Consensus 550 ~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~~ 602 (625)
+........+.+++.+||+.+|.+|||+.|+++.|+++....-
T Consensus 260 ----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~~~~ 302 (322)
T 1p4o_A 260 ----------DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGF 302 (322)
T ss_dssp ----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCTTH
T ss_pred ----------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhccCC
Confidence 0111223457778889999999999999999999999877543
No 111
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=7.5e-40 Score=333.51 Aligned_cols=253 Identities=16% Similarity=0.243 Sum_probs=191.3
Q ss_pred hHcccCCceeEEEEEEc-CCcEEEEEEeccccCC---hHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccCCC
Q 006922 330 EVLGKGTFGMAYKAILE-DGTTVVVKRLKDVNVG---KRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLGS 405 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 405 (625)
+.||+|+||+||+|... +|+.||+|+++..... .+.+.+|++++.+++||||+++++++.+.+..++||||+++ +
T Consensus 8 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~ 86 (292)
T 3o0g_A 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQ-D 86 (292)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCSE-E
T ss_pred eEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEecCCC-C
Confidence 56999999999999964 6899999999765332 26688999999999999999999999999999999999986 5
Q ss_pred hhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEeccccccccccc---cc
Q 006922 406 VSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSAL---AP 482 (625)
Q Consensus 406 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~---~~ 482 (625)
+.+.+.... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++..... ..
T Consensus 87 l~~~~~~~~----~~l~~~~~~~~~~ql~~~l~~lH~~~---ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 159 (292)
T 3o0g_A 87 LKKYFDSCN----GDLDPEIVKSFLFQLLKGLGFCHSRN---VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYS 159 (292)
T ss_dssp HHHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCSCCSCCC
T ss_pred HHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeecccceecCCcccccc
Confidence 555554432 24899999999999999999999998 999999999999999999999999999876432 22
Q ss_pred ccccCCCcCCccccCCCC-CCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcc---ccccccc---cc
Q 006922 483 VIARAAGYRAPEVTDSRK-ATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREE---WTAEVFD---VE 555 (625)
Q Consensus 483 ~~~~~~~y~aPE~~~~~~-~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~d---~~ 555 (625)
...+|..|+|||++.+.. ++.++|||||||++|||++|..||..... .......+....... ....+.+ ..
T Consensus 160 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 237 (292)
T 3o0g_A 160 AEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGND--VDDQLKRIFRLLGTPTEEQWPSMTKLPDYK 237 (292)
T ss_dssp SCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSS--HHHHHHHHHHHHCCCCTTTCTTGGGSTTCC
T ss_pred CCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCC--HHHHHHHHHHHhCCCChhhhhhhccccccc
Confidence 346788899999987665 89999999999999999998888644322 222222222221110 0000000 00
Q ss_pred --------ccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006922 556 --------LLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR 592 (625)
Q Consensus 556 --------~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 592 (625)
............++.+++.+|++.||++|||++|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 238 PYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp CCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 0000001112345667888999999999999999976
No 112
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=5.2e-40 Score=343.37 Aligned_cols=237 Identities=20% Similarity=0.305 Sum_probs=194.0
Q ss_pred hHcccCCceeEEEEEEc-CCcEEEEEEecccc----CChHHHHHHHHHHHcC-CCCceecceeEEEecCceEEEEEeccC
Q 006922 330 EVLGKGTFGMAYKAILE-DGTTVVVKRLKDVN----VGKRDFEQQMEIVGSI-RHENVVELKAYYYSKDEKLMVYDYYSL 403 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~----~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 403 (625)
+.||+|+||+||+|+.. +|+.||+|+++... ...+.+..|.+++..+ +||||+++++++.+.+..++||||+++
T Consensus 26 ~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~g 105 (353)
T 2i0e_A 26 MVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNG 105 (353)
T ss_dssp EEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEEEEECCCS
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEEEEeCCCC
Confidence 57999999999999975 48899999997642 2345678899999888 799999999999999999999999999
Q ss_pred CChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEeccccccccc---cc
Q 006922 404 GSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITS---AL 480 (625)
Q Consensus 404 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~---~~ 480 (625)
|+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++... ..
T Consensus 106 g~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~ 177 (353)
T 2i0e_A 106 GDLMYHIQQVG-----RFKEPHAVFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT 177 (353)
T ss_dssp CBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCC
T ss_pred CcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---EEeccCCHHHEEEcCCCcEEEEeCCcccccccCCcc
Confidence 99999997643 3899999999999999999999998 9999999999999999999999999998642 22
Q ss_pred ccccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccccccccccCCC
Q 006922 481 APVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYP 560 (625)
Q Consensus 481 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 560 (625)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||......+..+.+ ..... ..+
T Consensus 178 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i------~~~~~----------~~p 241 (353)
T 2i0e_A 178 TKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSI------MEHNV----------AYP 241 (353)
T ss_dssp BCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH------HHCCC----------CCC
T ss_pred cccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHHHH------HhCCC----------CCC
Confidence 33457899999999999999999999999999999999999999765433222111 11110 011
Q ss_pred CcHHHHHHHHHHHHHccCCCCCCCCCH-----HHHHH
Q 006922 561 NIEEEMVEMLQIAMSCVVRMPDQRPKM-----PDVVR 592 (625)
Q Consensus 561 ~~~~~~~~l~~l~~~Cl~~~P~~RPs~-----~ev~~ 592 (625)
.....++.+++.+|+..||.+||++ +|+++
T Consensus 242 --~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~ 276 (353)
T 2i0e_A 242 --KSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 276 (353)
T ss_dssp --TTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHT
T ss_pred --CCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 1122356778889999999999964 66653
No 113
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.4e-39 Score=332.14 Aligned_cols=248 Identities=22% Similarity=0.324 Sum_probs=196.7
Q ss_pred hHcccCCceeEEEEEEc-CC---cEEEEEEeccccCC--hHHHHHHHHHHHcCCCCceecceeEEEecCce-EEEEEecc
Q 006922 330 EVLGKGTFGMAYKAILE-DG---TTVVVKRLKDVNVG--KRDFEQQMEIVGSIRHENVVELKAYYYSKDEK-LMVYDYYS 402 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~-~g---~~vavK~l~~~~~~--~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~-~lv~e~~~ 402 (625)
+.||+|+||+||+|... ++ ..||+|+++..... .+.+.+|++++.+++||||+++++++...+.. ++||||+.
T Consensus 27 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~~~ 106 (298)
T 3pls_A 27 RVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMC 106 (298)
T ss_dssp EEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEECCCT
T ss_pred ceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEEeccc
Confidence 56999999999999853 33 37999999864332 35788999999999999999999999876655 99999999
Q ss_pred CCChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEeccccccccccc--
Q 006922 403 LGSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSAL-- 480 (625)
Q Consensus 403 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~-- 480 (625)
+|+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 107 ~~~L~~~~~~~~----~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~ 179 (298)
T 3pls_A 107 HGDLLQFIRSPQ----RNPTVKDLISFGLQVARGMEYLAEQK---FVHRDLAARNCMLDESFTVKVADFGLARDILDREY 179 (298)
T ss_dssp TCBHHHHHHCTT----CCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGG
T ss_pred CCCHHHHHhccc----cCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCCcEEeCcCCCcccccCCcc
Confidence 999999997633 24899999999999999999999998 999999999999999999999999999765322
Q ss_pred -----ccccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCC-CCCCCCcchhhHHHHHHHHhhcccccccccc
Q 006922 481 -----APVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSP-IHTTGGDELVHLVRWVHSVVREEWTAEVFDV 554 (625)
Q Consensus 481 -----~~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 554 (625)
.....++..|+|||.+.+..++.++||||||+++|||++|..| |......+....+ .. ..
T Consensus 180 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~---~~---~~-------- 245 (298)
T 3pls_A 180 YSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFL---AQ---GR-------- 245 (298)
T ss_dssp GCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHH---HT---TC--------
T ss_pred cccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHh---hc---CC--------
Confidence 1223456779999999999999999999999999999995555 5443332222211 11 00
Q ss_pred cccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCC
Q 006922 555 ELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPND 601 (625)
Q Consensus 555 ~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~ 601 (625)
..+........+.+++.+||+.+|.+|||+.|+++.|+++...-
T Consensus 246 ---~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l 289 (298)
T 3pls_A 246 ---RLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSAL 289 (298)
T ss_dssp ---CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred ---CCCCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHH
Confidence 00111112246778888999999999999999999999986654
No 114
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=1.1e-39 Score=334.87 Aligned_cols=253 Identities=21% Similarity=0.281 Sum_probs=193.0
Q ss_pred hHcccCCceeEEEEEE-cCCcEEEEEEeccccC------ChHHHHHHHHHHHcCC---CCceecceeEEEecC-----ce
Q 006922 330 EVLGKGTFGMAYKAIL-EDGTTVVVKRLKDVNV------GKRDFEQQMEIVGSIR---HENVVELKAYYYSKD-----EK 394 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~------~~~~~~~e~~~l~~l~---h~niv~l~~~~~~~~-----~~ 394 (625)
+.||+|+||+||+|.. .+|+.||+|+++.... ....+.+|++++.+++ ||||+++++++.... ..
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~~~~~~~ 94 (308)
T 3g33_A 15 AEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKV 94 (308)
T ss_dssp EEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCSSSEEEE
T ss_pred EEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCCCCceeE
Confidence 5699999999999995 5789999999974321 1346778888877764 999999999998765 47
Q ss_pred EEEEEeccCCChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEeccccc
Q 006922 395 LMVYDYYSLGSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLT 474 (625)
Q Consensus 395 ~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla 474 (625)
++||||+. ++|.+++..... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++
T Consensus 95 ~lv~e~~~-~~L~~~~~~~~~---~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~Nil~~~~~~~kl~Dfg~a 167 (308)
T 3g33_A 95 TLVFEHVD-QDLRTYLDKAPP---PGLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLA 167 (308)
T ss_dssp EEEEECCC-CBHHHHHHTCCT---TCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCTTTEEECTTSCEEECSCSCT
T ss_pred EEEehhhh-cCHHHHHhhccC---CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCEEEeeCccc
Confidence 89999998 599999876532 23899999999999999999999998 999999999999999999999999999
Q ss_pred cccccc--ccccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhh----cccc
Q 006922 475 TITSAL--APVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVR----EEWT 548 (625)
Q Consensus 475 ~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~----~~~~ 548 (625)
+..... .....+|..|+|||++.+..++.++|||||||++|||++|+.||......+.... +..... ..+.
T Consensus 168 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~---i~~~~~~~~~~~~~ 244 (308)
T 3g33_A 168 RIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGK---IFDLIGLPPEDDWP 244 (308)
T ss_dssp TTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHH---HHHHHCCCCTTTSC
T ss_pred cccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH---HHHHhCCCChhhcc
Confidence 876432 2345688999999999999999999999999999999999999976543332221 111111 1111
Q ss_pred ccccccc--cc-CCCCc-----HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006922 549 AEVFDVE--LL-RYPNI-----EEEMVEMLQIAMSCVVRMPDQRPKMPDVVR 592 (625)
Q Consensus 549 ~~~~d~~--~~-~~~~~-----~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 592 (625)
.....+. .. ..+.. .+...++.+++.+|++.||++|||+.|+++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 245 RDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp SSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred chhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence 1000000 00 00000 011245677888999999999999999975
No 115
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.4e-41 Score=347.59 Aligned_cols=253 Identities=23% Similarity=0.381 Sum_probs=183.0
Q ss_pred hHcccCCceeEEEEEEcCCcEEEEEEeccccCChHHHHHHHHHHHc--CCCCceecceeEEEecC----ceEEEEEeccC
Q 006922 330 EVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGS--IRHENVVELKAYYYSKD----EKLMVYDYYSL 403 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~--l~h~niv~l~~~~~~~~----~~~lv~e~~~~ 403 (625)
+.||+|+||+||+|... |+.||||+++.. ....+.+|.+++.. ++||||+++++++...+ ..++||||+++
T Consensus 9 ~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~ 85 (303)
T 3gxj_A 9 ESIGKGRFGEVWRGKWR-GEEVAVKIFSSR--EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEH 85 (303)
T ss_dssp EEEEECSSSEEEEC-CT-TSCEEEEECC-T--THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEEEEECCTT
T ss_pred hhccCCCCeEEEEEEEc-CcceEEEEeccc--chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEEEEeccCC
Confidence 57999999999999864 899999998753 34567788888887 78999999999998876 78999999999
Q ss_pred CChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHH--------hcCCCCceecCCCCCCEEeCCCCCeeEecccccc
Q 006922 404 GSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIH--------AANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTT 475 (625)
Q Consensus 404 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH--------~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~ 475 (625)
|+|.+++... .+++..+..++.|++.||+||| +.+ |+||||||+|||++.++.+||+|||+++
T Consensus 86 g~L~~~l~~~------~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~Nil~~~~~~~kl~DFg~a~ 156 (303)
T 3gxj_A 86 GSLFDYLNRY------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA---IAHRDLKSKNILVKKNGTCCIADLGLAV 156 (303)
T ss_dssp CCHHHHHHHC------CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCCC-BCCCCC-C
T ss_pred CCHHHHHhcc------CcchHHHHHHHHHHHHHHHHHHHHHhhhccCCC---EeeCcCCHHHeEECCCCCEEEeecCcce
Confidence 9999999654 3788889999999999999999 666 9999999999999999999999999997
Q ss_pred cccccc-------cccccCCCcCCccccCCC------CCCCccchhhhHHHHHHHHhC----------CCCCCCCCCcc-
Q 006922 476 ITSALA-------PVIARAAGYRAPEVTDSR------KATQASDVYSFGVVLLEILTG----------KSPIHTTGGDE- 531 (625)
Q Consensus 476 ~~~~~~-------~~~~~~~~y~aPE~~~~~------~~~~~~DvwS~Gvil~elltG----------~~p~~~~~~~~- 531 (625)
...... ....||..|+|||++.+. .++.++|||||||++|||+|| +.||.......
T Consensus 157 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~~~~~ 236 (303)
T 3gxj_A 157 RHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDP 236 (303)
T ss_dssp CEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTCC-CC
T ss_pred eccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccCCCCc
Confidence 654322 123688899999998766 344689999999999999999 66765432211
Q ss_pred -hhhHHHHHHHHhhcccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCCC
Q 006922 532 -LVHLVRWVHSVVREEWTAEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPNDS 602 (625)
Q Consensus 532 -~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~~ 602 (625)
....... +.... ..+.........+....+.+++.+||+.||.+|||+.|+++.|+.+..+..
T Consensus 237 ~~~~~~~~----~~~~~----~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~~~ 300 (303)
T 3gxj_A 237 SVEEMRKV----VCEQK----LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEG 300 (303)
T ss_dssp CCC-CHHH----HTTSC----CCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC--
T ss_pred cHHHHHHH----HHHhh----cCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhhcc
Confidence 1111110 00110 111111001122556678899999999999999999999999999987653
No 116
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=7.5e-40 Score=347.63 Aligned_cols=262 Identities=18% Similarity=0.282 Sum_probs=197.9
Q ss_pred hHcccC--CceeEEEEEEc-CCcEEEEEEeccccCCh---HHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccC
Q 006922 330 EVLGKG--TFGMAYKAILE-DGTTVVVKRLKDVNVGK---RDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSL 403 (625)
Q Consensus 330 ~~lg~G--~~g~Vy~~~~~-~g~~vavK~l~~~~~~~---~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 403 (625)
+.||+| +||+||+|... +|+.||||+++...... +.+.+|++++++++|||||++++++...+..++||||+++
T Consensus 31 ~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 110 (389)
T 3gni_B 31 TVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAY 110 (389)
T ss_dssp EEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred ecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEEEEEccCC
Confidence 579999 99999999965 69999999998654332 5678899999999999999999999999999999999999
Q ss_pred CChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEecccccccccc----
Q 006922 404 GSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSA---- 479 (625)
Q Consensus 404 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~---- 479 (625)
|+|.+++..... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||.+.....
T Consensus 111 ~~L~~~l~~~~~---~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~~~~ 184 (389)
T 3gni_B 111 GSAKDLICTHFM---DGMNELAIAYILQGVLKALDYIHHMG---YVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQR 184 (389)
T ss_dssp CBHHHHHHHTCT---TCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCGGGCEECEETTEE
T ss_pred CCHHHHHhhhcc---cCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEcccccceeecccccc
Confidence 999999976532 24899999999999999999999998 99999999999999999999999999865421
Q ss_pred ------cccccccCCCcCCccccCC--CCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhc------
Q 006922 480 ------LAPVIARAAGYRAPEVTDS--RKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVRE------ 545 (625)
Q Consensus 480 ------~~~~~~~~~~y~aPE~~~~--~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~------ 545 (625)
......+|..|+|||++.+ ..++.++|||||||++|||++|+.||.+....+... .........
T Consensus 185 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~--~~~~~~~~~~~~~~~ 262 (389)
T 3gni_B 185 QRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLL--EKLNGTVPCLLDTST 262 (389)
T ss_dssp CSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHH--HC-------------
T ss_pred ccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHH--HHhcCCCCccccccc
Confidence 1122357778999999987 679999999999999999999999998755433221 100000000
Q ss_pred ---cc-------------cccccc--------ccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH--HHhhCC
Q 006922 546 ---EW-------------TAEVFD--------VELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRV--IENVRP 599 (625)
Q Consensus 546 ---~~-------------~~~~~d--------~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~--L~~~~~ 599 (625)
.. ..+... ......+.......++.+++.+||+.||++|||+.|+++. ++++..
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f~~~~~ 342 (389)
T 3gni_B 263 IPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIKR 342 (389)
T ss_dssp -------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGGGC--
T ss_pred cccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHHHHHhh
Confidence 00 000000 0000001111223457888999999999999999999864 555543
No 117
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=5.1e-40 Score=334.60 Aligned_cols=243 Identities=23% Similarity=0.338 Sum_probs=195.0
Q ss_pred HcccCCceeEEEEEE---cCCcEEEEEEeccccCC---hHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccCC
Q 006922 331 VLGKGTFGMAYKAIL---EDGTTVVVKRLKDVNVG---KRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLG 404 (625)
Q Consensus 331 ~lg~G~~g~Vy~~~~---~~g~~vavK~l~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 404 (625)
.||+|+||+||+|.. ..++.||||+++..... .+.+.+|++++..++||||+++++++ ..+..++||||++++
T Consensus 24 ~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~~~ 102 (291)
T 1xbb_A 24 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELG 102 (291)
T ss_dssp EEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEEEEECCTTE
T ss_pred ccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEEEEEeCCCC
Confidence 699999999999963 34789999999865322 36789999999999999999999999 567789999999999
Q ss_pred ChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEeccccccccccccc--
Q 006922 405 SVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAP-- 482 (625)
Q Consensus 405 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~-- 482 (625)
+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.......
T Consensus 103 ~L~~~l~~~~-----~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 174 (291)
T 1xbb_A 103 PLNKYLQQNR-----HVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 174 (291)
T ss_dssp EHHHHHHHCT-----TCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEE
T ss_pred CHHHHHHhCc-----CCCHHHHHHHHHHHHHHHHHHHhCC---eEcCCCCcceEEEeCCCcEEEccCCcceeeccCCCcc
Confidence 9999997643 3899999999999999999999998 99999999999999999999999999987643221
Q ss_pred ----ccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHh-CCCCCCCCCCcchhhHHHHHHHHhhccccccccccccc
Q 006922 483 ----VIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELL 557 (625)
Q Consensus 483 ----~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 557 (625)
...++..|+|||.+.+..++.++||||||+++|||++ |+.||......+....+ . ....
T Consensus 175 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~---~----~~~~--------- 238 (291)
T 1xbb_A 175 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAML---E----KGER--------- 238 (291)
T ss_dssp EC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHH---H----TTCC---------
T ss_pred cccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH---H----cCCC---------
Confidence 1234567999999988889999999999999999999 99999765433222111 1 1100
Q ss_pred CCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCC
Q 006922 558 RYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRP 599 (625)
Q Consensus 558 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~ 599 (625)
.+.......++.+++.+||+.||.+||++.|+++.|+++-.
T Consensus 239 -~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 279 (291)
T 1xbb_A 239 -MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY 279 (291)
T ss_dssp -CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred -CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 00111223467788889999999999999999999988743
No 118
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=9.4e-40 Score=332.34 Aligned_cols=249 Identities=26% Similarity=0.435 Sum_probs=189.6
Q ss_pred hHcccCCceeEEEEEEcCCcEEEEEEeccccCCh---HHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccCCCh
Q 006922 330 EVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGK---RDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLGSV 406 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~---~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 406 (625)
+.||+|+||+||+|... ..||+|+++...... +.+.+|++++.+++||||+++++++ ..+..++||||+++++|
T Consensus 30 ~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e~~~~~~L 106 (289)
T 3og7_A 30 QRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQWCEGSSL 106 (289)
T ss_dssp EEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEECCCEEEH
T ss_pred eEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEEecCCCcH
Confidence 57999999999999854 469999998654332 5688999999999999999999965 45678999999999999
Q ss_pred hhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEeccccccccccc-----c
Q 006922 407 SAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSAL-----A 481 (625)
Q Consensus 407 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~-----~ 481 (625)
.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++..... .
T Consensus 107 ~~~l~~~~----~~~~~~~~~~i~~qi~~~L~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 179 (289)
T 3og7_A 107 YHHLHASE----TKFEMKKLIDIARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQF 179 (289)
T ss_dssp HHHHTTC-------CCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEETTTEEEECCCC--------------
T ss_pred HHHHhhcc----CCCCHHHHHHHHHHHHHHHHHHHhCC---cccccCccceEEECCCCCEEEccceeccccccccccccc
Confidence 99996543 24899999999999999999999998 999999999999999999999999999765421 1
Q ss_pred cccccCCCcCCccccC---CCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccccccccccC
Q 006922 482 PVIARAAGYRAPEVTD---SRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLR 558 (625)
Q Consensus 482 ~~~~~~~~y~aPE~~~---~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 558 (625)
....++..|+|||.+. +..++.++||||||+++|||++|+.||......+. ....+.. .... +....
T Consensus 180 ~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~--~~~~~~~----~~~~----~~~~~ 249 (289)
T 3og7_A 180 EQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ--IIEMVGR----GSLS----PDLSK 249 (289)
T ss_dssp ----CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHH--HHHHHHH----TSCC----CCTTS
T ss_pred cccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHH--HHHHhcc----cccC----cchhh
Confidence 2346788999999986 56788899999999999999999999976543221 1221111 1110 00000
Q ss_pred CCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCC
Q 006922 559 YPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPN 600 (625)
Q Consensus 559 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~ 600 (625)
.......++.+++.+||+.+|.+|||+.|+++.|+++..+
T Consensus 250 --~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~e 289 (289)
T 3og7_A 250 --VRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELARE 289 (289)
T ss_dssp --SCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTCC
T ss_pred --ccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhhC
Confidence 0112234677888899999999999999999999998753
No 119
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=7.3e-40 Score=335.02 Aligned_cols=252 Identities=23% Similarity=0.324 Sum_probs=196.8
Q ss_pred hHcccCCceeEEEEEE-----cCCcEEEEEEecccc--CChHHHHHHHHHHHcCCCCceecceeEEEec--CceEEEEEe
Q 006922 330 EVLGKGTFGMAYKAIL-----EDGTTVVVKRLKDVN--VGKRDFEQQMEIVGSIRHENVVELKAYYYSK--DEKLMVYDY 400 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~-----~~g~~vavK~l~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv~e~ 400 (625)
+.||+|+||.||+|.. .+++.||+|+++... ...+.+.+|++++.+++||||+++++++... +..++||||
T Consensus 27 ~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~ 106 (302)
T 4e5w_A 27 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEF 106 (302)
T ss_dssp EEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCEEEEEEC
T ss_pred hccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceEEEEEEe
Confidence 5699999999999983 468999999998543 2346789999999999999999999999876 568999999
Q ss_pred ccCCChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEeccccccccccc
Q 006922 401 YSLGSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSAL 480 (625)
Q Consensus 401 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~ 480 (625)
+++|+|.+++..... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 107 ~~~~~L~~~l~~~~~----~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 179 (302)
T 4e5w_A 107 LPSGSLKEYLPKNKN----KINLKQQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEHQVKIGDFGLTKAIETD 179 (302)
T ss_dssp CTTCBHHHHHHHHTT----TCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCCTTCEECCTT
T ss_pred CCCCcHHHHHHhccc----cCCHHHHHHHHHHHHHHHHHhhcCC---cccCCCchheEEEcCCCCEEECcccccccccCC
Confidence 999999999965432 3899999999999999999999998 999999999999999999999999999876432
Q ss_pred c------cccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCc--------chhhHHHHHHHHhhcc
Q 006922 481 A------PVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGD--------ELVHLVRWVHSVVREE 546 (625)
Q Consensus 481 ~------~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~--------~~~~~~~~~~~~~~~~ 546 (625)
. ....++..|+|||.+.+..++.++||||+|+++|||+||+.|+...... ........+.......
T Consensus 180 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (302)
T 4e5w_A 180 KEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEG 259 (302)
T ss_dssp CCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHHTT
T ss_pred CcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHhcc
Confidence 2 2234666799999998888999999999999999999999986432100 0000011111111111
Q ss_pred cccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhC
Q 006922 547 WTAEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVR 598 (625)
Q Consensus 547 ~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~ 598 (625)
. ..+.......++.+++.+||+.||.+|||+.|+++.|+.+.
T Consensus 260 ~----------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 260 K----------RLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp C----------CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred C----------CCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 0 11111222346778888999999999999999999999864
No 120
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=1e-39 Score=347.45 Aligned_cols=243 Identities=19% Similarity=0.291 Sum_probs=187.4
Q ss_pred hHcccCCceeEEEEEEc-CCcEEEEEEeccccCChHHHHHHHHHHH-cCCCCceecceeEEEe----cCceEEEEEeccC
Q 006922 330 EVLGKGTFGMAYKAILE-DGTTVVVKRLKDVNVGKRDFEQQMEIVG-SIRHENVVELKAYYYS----KDEKLMVYDYYSL 403 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~e~~~l~-~l~h~niv~l~~~~~~----~~~~~lv~e~~~~ 403 (625)
++||+|+||+||++... +|+.||||+++. ...+.+|++++. ..+||||+++++++.. .+..++||||+++
T Consensus 68 ~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~g 143 (400)
T 1nxk_A 68 QVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDG 143 (400)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEC----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCCS
T ss_pred ceeeeccCeEEEEEEECCCCCEEEEEEeCc----chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEeCCC
Confidence 46999999999999965 689999999974 356778888874 4589999999999876 5578999999999
Q ss_pred CChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCC---CCCeeEeccccccccccc
Q 006922 404 GSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNS---QQYGCVSDLGLTTITSAL 480 (625)
Q Consensus 404 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~---~~~~kl~DfGla~~~~~~ 480 (625)
|+|.+++.... ...+++..+..|+.|++.||+|||+.+ |+||||||+|||++. ++.+||+|||+++.....
T Consensus 144 g~L~~~l~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~ 217 (400)
T 1nxk_A 144 GELFSRIQDRG---DQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH 217 (400)
T ss_dssp EEHHHHHHCC------CCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSTTCCEEECCCTTCEECC--
T ss_pred CcHHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCcCcceEEEecCCCCccEEEEecccccccCCC
Confidence 99999997643 234899999999999999999999998 999999999999998 789999999999876432
Q ss_pred --ccccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchh-hHHHHHHHHhhccccccccccccc
Q 006922 481 --APVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELV-HLVRWVHSVVREEWTAEVFDVELL 557 (625)
Q Consensus 481 --~~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~~~~ 557 (625)
.....+|..|+|||++.+..++.++|||||||++|||++|+.||......+.. .....+. ... ++...
T Consensus 218 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~---~~~-----~~~~~- 288 (400)
T 1nxk_A 218 NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR---MGQ-----YEFPN- 288 (400)
T ss_dssp ---------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHH---HTC-----CCCCT-
T ss_pred CccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHH---cCc-----ccCCC-
Confidence 23456788999999999999999999999999999999999999765443221 1111111 010 00000
Q ss_pred CCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006922 558 RYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRV 593 (625)
Q Consensus 558 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 593 (625)
+.......++.+++.+||..||++|||+.|+++.
T Consensus 289 --~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 322 (400)
T 1nxk_A 289 --PEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 322 (400)
T ss_dssp --TTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred --cccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0011123456778889999999999999999873
No 121
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=1.6e-39 Score=334.43 Aligned_cols=251 Identities=23% Similarity=0.360 Sum_probs=192.0
Q ss_pred HhHcccCCceeEEEEEEc----CCcEEEEEEeccccCCh---HHHHHHHHHHHcCCCCceecceeEEEecC-----ceEE
Q 006922 329 AEVLGKGTFGMAYKAILE----DGTTVVVKRLKDVNVGK---RDFEQQMEIVGSIRHENVVELKAYYYSKD-----EKLM 396 (625)
Q Consensus 329 ~~~lg~G~~g~Vy~~~~~----~g~~vavK~l~~~~~~~---~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~l 396 (625)
.+.||+|+||+||+|... .+..||+|+++...... +.+.+|++++.+++||||+++++++...+ ..++
T Consensus 39 ~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 118 (313)
T 3brb_A 39 GKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMV 118 (313)
T ss_dssp EEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-------CEEE
T ss_pred ccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCCcccEE
Confidence 357999999999999853 34589999998654332 56889999999999999999999998755 3499
Q ss_pred EEEeccCCChhhhhccccC-CCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEecccccc
Q 006922 397 VYDYYSLGSVSAMLHSERG-EGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTT 475 (625)
Q Consensus 397 v~e~~~~g~L~~~l~~~~~-~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~ 475 (625)
||||+++|+|.+++..... .....+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++
T Consensus 119 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dikp~NIli~~~~~~kl~Dfg~~~ 195 (313)
T 3brb_A 119 ILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRN---FLHRDLAARNCMLRDDMTVCVADFGLSK 195 (313)
T ss_dssp EEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTT---CCCCCCSGGGEEECTTSCEEECSCSCC-
T ss_pred EEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCCcEEEeecCcce
Confidence 9999999999999854321 22345899999999999999999999998 9999999999999999999999999998
Q ss_pred cccccc-----cccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHh-CCCCCCCCCCcchhhHHHHHHHHhhccccc
Q 006922 476 ITSALA-----PVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTA 549 (625)
Q Consensus 476 ~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 549 (625)
...... ....++..|+|||.+.+..++.++||||||+++|||++ |+.||......+....+ . ....
T Consensus 196 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~---~---~~~~-- 267 (313)
T 3brb_A 196 KIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYL---L---HGHR-- 267 (313)
T ss_dssp ---------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHH---H---TTCC--
T ss_pred ecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHH---H---cCCC--
Confidence 654321 22345667999999999999999999999999999999 99999765544332211 1 1100
Q ss_pred ccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCC
Q 006922 550 EVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRP 599 (625)
Q Consensus 550 ~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~ 599 (625)
.+.......++.+++.+||..+|.+|||+.|+++.|+++..
T Consensus 268 ---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~ 308 (313)
T 3brb_A 268 ---------LKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLE 308 (313)
T ss_dssp ---------CCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ---------CCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 01112223467788889999999999999999999998754
No 122
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=3.7e-40 Score=353.45 Aligned_cols=243 Identities=18% Similarity=0.259 Sum_probs=194.1
Q ss_pred hHcccCCceeEEEEEEc-CCcEEEEEEecccc----CChHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccCC
Q 006922 330 EVLGKGTFGMAYKAILE-DGTTVVVKRLKDVN----VGKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLG 404 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 404 (625)
++||+|+||+||+|+.. +++.||+|++++.. .....+.+|+.++..++||||++++++|.+.+..++||||+++|
T Consensus 80 ~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV~Ey~~gg 159 (437)
T 4aw2_A 80 KVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGG 159 (437)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCCTTC
T ss_pred EEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEEEEecCCCC
Confidence 57999999999999965 58899999997532 22345889999999999999999999999999999999999999
Q ss_pred ChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEecccccccccccc---
Q 006922 405 SVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALA--- 481 (625)
Q Consensus 405 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~--- 481 (625)
+|.+++..... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 160 ~L~~~l~~~~~----~l~e~~~~~~~~qi~~aL~~LH~~g---iiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~~~~ 232 (437)
T 4aw2_A 160 DLLTLLSKFED----RLPEEMARFYLAEMVIAIDSVHQLH---YVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQ 232 (437)
T ss_dssp BHHHHHHTTTT----CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCEE
T ss_pred cHHHHHHHccC----CCCHHHHHHHHHHHHHHHHHHHhCC---eEecccCHHHeeEcCCCCEEEcchhhhhhcccCCCcc
Confidence 99999976322 4899999999999999999999998 9999999999999999999999999997654322
Q ss_pred -cccccCCCcCCccccC-----CCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhccccccccccc
Q 006922 482 -PVIARAAGYRAPEVTD-----SRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVE 555 (625)
Q Consensus 482 -~~~~~~~~y~aPE~~~-----~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 555 (625)
....||+.|+|||++. ...++.++|||||||++|||++|+.||...+..+....+..... .-. + +.
T Consensus 233 ~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~--~~~-----~-p~ 304 (437)
T 4aw2_A 233 SSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKE--RFQ-----F-PT 304 (437)
T ss_dssp CCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHH--HCC-----C-CS
T ss_pred cccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhccc--ccc-----C-Cc
Confidence 2357899999999986 56789999999999999999999999986543333222110000 000 0 00
Q ss_pred ccCCCCcHHHHHHHHHHHHHccCCCCCC--CCCHHHHHH
Q 006922 556 LLRYPNIEEEMVEMLQIAMSCVVRMPDQ--RPKMPDVVR 592 (625)
Q Consensus 556 ~~~~~~~~~~~~~l~~l~~~Cl~~~P~~--RPs~~ev~~ 592 (625)
..+... .++.+++.+|+..+|++ ||+++|+++
T Consensus 305 --~~~~~s---~~~~dLi~~lL~~~~~r~~r~~~~eil~ 338 (437)
T 4aw2_A 305 --QVTDVS---ENAKDLIRRLICSREHRLGQNGIEDFKK 338 (437)
T ss_dssp --SCCCSC---HHHHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred --ccccCC---HHHHHHHHHHhcccccccCCCCHHHHhC
Confidence 001122 34566777999888888 999999986
No 123
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=1.2e-39 Score=344.78 Aligned_cols=243 Identities=22% Similarity=0.367 Sum_probs=196.8
Q ss_pred hHcccCCceeEEEEEEc-CCcEEEEEEeccccC-ChHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccCCChh
Q 006922 330 EVLGKGTFGMAYKAILE-DGTTVVVKRLKDVNV-GKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLGSVS 407 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~ 407 (625)
+.||+|+||+||+|... +|+.||+|++..... ....+.+|++++.+++||||+++++++.+.+..++||||+++|+|.
T Consensus 57 ~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~~~gg~L~ 136 (387)
T 1kob_A 57 EELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELF 136 (387)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECCCCCBHH
T ss_pred EEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEcCCCCcHH
Confidence 57999999999999964 689999999976432 3457889999999999999999999999999999999999999999
Q ss_pred hhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCC--CCCeeEeccccccccccc--ccc
Q 006922 408 AMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNS--QQYGCVSDLGLTTITSAL--APV 483 (625)
Q Consensus 408 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~--~~~~kl~DfGla~~~~~~--~~~ 483 (625)
+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++. ++.+||+|||+++..... ...
T Consensus 137 ~~l~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~~~ 209 (387)
T 1kob_A 137 DRIAAED----YKMSEAEVINYMRQACEGLKHMHEHS---IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKV 209 (387)
T ss_dssp HHTTCTT----CCBCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCEEE
T ss_pred HHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccchHHeEEecCCCCceEEEecccceecCCCcceee
Confidence 9987542 24899999999999999999999998 999999999999974 467999999999876543 233
Q ss_pred cccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccccccccccCCCCcH
Q 006922 484 IARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIE 563 (625)
Q Consensus 484 ~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 563 (625)
..+|..|+|||++.+..++.++|||||||++|||++|+.||......+. ...+ ....+. ++.. . ..
T Consensus 210 ~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~---~~~i---~~~~~~---~~~~--~---~~ 275 (387)
T 1kob_A 210 TTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLET---LQNV---KRCDWE---FDED--A---FS 275 (387)
T ss_dssp ECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHH---HHHH---HHCCCC---CCSS--T---TT
T ss_pred eccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHH---HHHH---HhCCCC---CCcc--c---cc
Confidence 4688999999999999999999999999999999999999976433222 1111 111110 0100 0 11
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006922 564 EEMVEMLQIAMSCVVRMPDQRPKMPDVVRV 593 (625)
Q Consensus 564 ~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 593 (625)
....++.+++.+||..||++|||+.|+++.
T Consensus 276 ~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 276 SVSPEAKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp TSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred cCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 122356778889999999999999999863
No 124
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=4.1e-40 Score=338.68 Aligned_cols=249 Identities=20% Similarity=0.310 Sum_probs=190.4
Q ss_pred hHcccCCceeEEEEEE-cCCcEEEEEEeccccCC----hHHHHHHHHHHHcCCCCceecceeEEEecCce----EEEEEe
Q 006922 330 EVLGKGTFGMAYKAIL-EDGTTVVVKRLKDVNVG----KRDFEQQMEIVGSIRHENVVELKAYYYSKDEK----LMVYDY 400 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~----~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~----~lv~e~ 400 (625)
+.||+|+||+||++.. .+++.||||+++..... ...+.+|++++.+++||||+++++++...... ++||||
T Consensus 18 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~lv~e~ 97 (311)
T 3ork_A 18 EILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEY 97 (311)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEEEEEEEC
T ss_pred EEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcccEEEEec
Confidence 5799999999999995 57899999999865332 24688999999999999999999998876543 999999
Q ss_pred ccCCChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEeccccccccccc
Q 006922 401 YSLGSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSAL 480 (625)
Q Consensus 401 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~ 480 (625)
+++++|.+++.... .+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 98 ~~g~~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~ 169 (311)
T 3ork_A 98 VDGVTLRDIVHTEG-----PMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADS 169 (311)
T ss_dssp CCEEEHHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEETTSCEEECCCSCC------
T ss_pred CCCCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---CCcCCCCHHHEEEcCCCCEEEeeccCccccccc
Confidence 99999999997643 4899999999999999999999998 999999999999999999999999999865432
Q ss_pred ------ccccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccccccc
Q 006922 481 ------APVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDV 554 (625)
Q Consensus 481 ------~~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 554 (625)
.....|+..|+|||++.+..++.++|||||||++|||+||+.||......+.. .......... +
T Consensus 170 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~------~~~~~~~~~~----~ 239 (311)
T 3ork_A 170 GNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVA------YQHVREDPIP----P 239 (311)
T ss_dssp ------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH------HHHHHCCCCC----H
T ss_pred ccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHH------HHHhcCCCCC----c
Confidence 12245788999999999999999999999999999999999999764432211 1111111000 0
Q ss_pred cccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHH-HHHHhhCCC
Q 006922 555 ELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVV-RVIENVRPN 600 (625)
Q Consensus 555 ~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~-~~L~~~~~~ 600 (625)
.. ..+. ...++.+++.+||+.||++||+..+++ ..+..+...
T Consensus 240 ~~-~~~~---~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~~ 282 (311)
T 3ork_A 240 SA-RHEG---LSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNG 282 (311)
T ss_dssp HH-HSTT---CCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHTT
T ss_pred cc-ccCC---CCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHhcC
Confidence 00 0011 123567888899999999999666554 566555443
No 125
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=8.2e-40 Score=331.25 Aligned_cols=245 Identities=23% Similarity=0.395 Sum_probs=196.1
Q ss_pred hHcccCCceeEEEEEEcC----CcEEEEEEeccccC--ChHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccC
Q 006922 330 EVLGKGTFGMAYKAILED----GTTVVVKRLKDVNV--GKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSL 403 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~~----g~~vavK~l~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 403 (625)
+.||+|+||+||+|...+ +..||+|+++.... ..+.+.+|++++.+++||||+++++++.+ +..++||||+++
T Consensus 18 ~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~~~ 96 (281)
T 3cc6_A 18 RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWIIMELYPY 96 (281)
T ss_dssp EEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCEEEEECCTT
T ss_pred EEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCEEEEecCCC
Confidence 569999999999998532 34699999986432 24678999999999999999999999865 457899999999
Q ss_pred CChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEecccccccccccc--
Q 006922 404 GSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALA-- 481 (625)
Q Consensus 404 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~-- 481 (625)
++|.+++..... .+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 97 ~~L~~~l~~~~~----~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 169 (281)
T 3cc6_A 97 GELGHYLERNKN----SLKVLTLVLYSLQICKAMAYLESIN---CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYY 169 (281)
T ss_dssp CBHHHHHHHHTT----TCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEEEETTEEEECCCCGGGCC------
T ss_pred CCHHHHHHhccc----cCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCccceEEECCCCcEEeCccCCCccccccccc
Confidence 999999976432 4899999999999999999999998 9999999999999999999999999998764322
Q ss_pred --cccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHh-CCCCCCCCCCcchhhHHHHHHHHhhcccccccccccccC
Q 006922 482 --PVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLR 558 (625)
Q Consensus 482 --~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 558 (625)
....++..|+|||.+.+..++.++||||||+++|||+| |+.||......+....+. . ...
T Consensus 170 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~~---~---~~~----------- 232 (281)
T 3cc6_A 170 KASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLE---K---GDR----------- 232 (281)
T ss_dssp ---CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHHH---H---TCC-----------
T ss_pred ccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHHh---c---CCC-----------
Confidence 22345667999999988889999999999999999998 999997655444332221 1 100
Q ss_pred CCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCC
Q 006922 559 YPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRP 599 (625)
Q Consensus 559 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~ 599 (625)
.+........+.+++.+||..+|++||++.|+++.|+.+..
T Consensus 233 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~ 273 (281)
T 3cc6_A 233 LPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQ 273 (281)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHH
Confidence 01111122457788889999999999999999999988743
No 126
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=4.1e-41 Score=355.80 Aligned_cols=236 Identities=15% Similarity=0.185 Sum_probs=185.2
Q ss_pred hHcccCCceeEEEEEE-cCCcEEEEEEecccc----CChHHHHHHH---HHHHcCCCCceecce-------eEEEecCc-
Q 006922 330 EVLGKGTFGMAYKAIL-EDGTTVVVKRLKDVN----VGKRDFEQQM---EIVGSIRHENVVELK-------AYYYSKDE- 393 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~----~~~~~~~~e~---~~l~~l~h~niv~l~-------~~~~~~~~- 393 (625)
+.||+|+||+||+|.. .+|+.||||+++... ...+.+.+|+ +++++++|||||+++ +++...+.
T Consensus 79 ~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~ 158 (377)
T 3byv_A 79 TVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKK 158 (377)
T ss_dssp EEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEECTTSC
T ss_pred ceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhhccCCc
Confidence 5799999999999995 579999999997432 2236788999 455566899999998 66665532
Q ss_pred ----------------eEEEEEeccCCChhhhhccccC--CCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCC
Q 006922 394 ----------------KLMVYDYYSLGSVSAMLHSERG--EGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKS 455 (625)
Q Consensus 394 ----------------~~lv~e~~~~g~L~~~l~~~~~--~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~ 455 (625)
.++||||+ +|+|.+++..... .....++|..+..|+.|++.||+|||+++ |+||||||
T Consensus 159 ~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivHrDikp 234 (377)
T 3byv_A 159 KMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG---LVHTYLRP 234 (377)
T ss_dssp SEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTT---EECSCCCG
T ss_pred cccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCC---eecCCCCH
Confidence 78999999 6899999986431 11223557888999999999999999998 99999999
Q ss_pred CCEEeCCCCCeeEecccccccccccccccccCCCcCCccccCCC-----------CCCCccchhhhHHHHHHHHhCCCCC
Q 006922 456 SNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVTDSR-----------KATQASDVYSFGVVLLEILTGKSPI 524 (625)
Q Consensus 456 ~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~y~aPE~~~~~-----------~~~~~~DvwS~Gvil~elltG~~p~ 524 (625)
+|||++.++.+||+|||+++..........| ..|+|||++.+. .++.++|||||||++|||++|+.||
T Consensus 235 ~NIll~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~~Pf 313 (377)
T 3byv_A 235 VDIVLDQRGGVFLTGFEHLVRDGARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPI 313 (377)
T ss_dssp GGEEECTTCCEEECCGGGCEETTCEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSSCCC
T ss_pred HHEEEcCCCCEEEEechhheecCCcccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHCCCCC
Confidence 9999999999999999999976655555667 889999999877 8999999999999999999999999
Q ss_pred CCCCCcchhhHHHHHHHHhhcccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006922 525 HTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR 592 (625)
Q Consensus 525 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 592 (625)
......+... .+. ...+.. ..++.+++.+||+.||++|||+.|+++
T Consensus 314 ~~~~~~~~~~---------------~~~----~~~~~~---~~~~~~li~~~L~~dp~~Rpt~~e~l~ 359 (377)
T 3byv_A 314 TKDAALGGSE---------------WIF----RSCKNI---PQPVRALLEGFLRYPKEDRLLPLQAME 359 (377)
T ss_dssp ------CCSG---------------GGG----SSCCCC---CHHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred cccccccchh---------------hhh----hhccCC---CHHHHHHHHHHcCCCchhCCCHHHHhh
Confidence 7543322111 010 011112 235677888999999999999999985
No 127
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=8.1e-40 Score=338.90 Aligned_cols=254 Identities=22% Similarity=0.379 Sum_probs=200.1
Q ss_pred HhHcccCCceeEEEEEE-cCCcEE--EEEEecccc--CChHHHHHHHHHHHcC-CCCceecceeEEEecCceEEEEEecc
Q 006922 329 AEVLGKGTFGMAYKAIL-EDGTTV--VVKRLKDVN--VGKRDFEQQMEIVGSI-RHENVVELKAYYYSKDEKLMVYDYYS 402 (625)
Q Consensus 329 ~~~lg~G~~g~Vy~~~~-~~g~~v--avK~l~~~~--~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~ 402 (625)
.+.||+|+||+||+|.. .+|..+ |+|+++... ...+.+.+|++++.++ +||||+++++++...+..++||||++
T Consensus 30 ~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~ 109 (327)
T 1fvr_A 30 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAP 109 (327)
T ss_dssp EEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEECCCT
T ss_pred eeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEEEecCC
Confidence 35799999999999995 456654 999987532 2346789999999999 89999999999999999999999999
Q ss_pred CCChhhhhccccC-----------CCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEecc
Q 006922 403 LGSVSAMLHSERG-----------EGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDL 471 (625)
Q Consensus 403 ~g~L~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~Df 471 (625)
+|+|.+++..... .....+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+||
T Consensus 110 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~~~~~kL~Df 186 (327)
T 1fvr_A 110 HGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVAKIADF 186 (327)
T ss_dssp TCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECGGGCEEECCT
T ss_pred CCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCccceEEEcCCCeEEEccc
Confidence 9999999976430 11235899999999999999999999998 999999999999999999999999
Q ss_pred ccccccccc--ccccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHh-CCCCCCCCCCcchhhHHHHHHHHhhcccc
Q 006922 472 GLTTITSAL--APVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWT 548 (625)
Q Consensus 472 Gla~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 548 (625)
|+++..... .....++..|+|||.+.+..++.++||||||+++|||+| |+.||......+.. . . +.....
T Consensus 187 g~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~---~---~-~~~~~~ 259 (327)
T 1fvr_A 187 GLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELY---E---K-LPQGYR 259 (327)
T ss_dssp TCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHH---H---H-GGGTCC
T ss_pred CcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHH---H---H-hhcCCC
Confidence 999754322 122345678999999988889999999999999999998 99999765432211 1 1 111100
Q ss_pred cccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCCC
Q 006922 549 AEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPNDS 602 (625)
Q Consensus 549 ~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~~ 602 (625)
.+.......++.+++.+||..+|.+|||+.|+++.|+.+..+..
T Consensus 260 ----------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 303 (327)
T 1fvr_A 260 ----------LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERK 303 (327)
T ss_dssp ----------CCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSS
T ss_pred ----------CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhhc
Confidence 01111122457788889999999999999999999998866544
No 128
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=2.8e-40 Score=342.39 Aligned_cols=257 Identities=22% Similarity=0.349 Sum_probs=198.8
Q ss_pred hHcccCCceeEEEEEE-----cCCcEEEEEEeccccC-ChHHHHHHHHHHHcCCCCceecceeEEEe--cCceEEEEEec
Q 006922 330 EVLGKGTFGMAYKAIL-----EDGTTVVVKRLKDVNV-GKRDFEQQMEIVGSIRHENVVELKAYYYS--KDEKLMVYDYY 401 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~-----~~g~~vavK~l~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~lv~e~~ 401 (625)
+.||+|+||+||++.. .+++.||||++..... ..+.+.+|++++.+++||||+++++++.. .+..++||||+
T Consensus 29 ~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~ 108 (327)
T 3lxl_A 29 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYL 108 (327)
T ss_dssp EEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEEEEEECC
T ss_pred hhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEEEEEeec
Confidence 5799999999999983 4688999999986533 23568999999999999999999999874 45688999999
Q ss_pred cCCChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEecccccccccccc
Q 006922 402 SLGSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALA 481 (625)
Q Consensus 402 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~ 481 (625)
++++|.+++..... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 109 ~~~~L~~~l~~~~~----~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 181 (327)
T 3lxl_A 109 PSGCLRDFLQRHRA----RLDASRLLLYSSQICKGMEYLGSRR---CVHRDLAARNILVESEAHVKIADFGLAKLLPLDK 181 (327)
T ss_dssp TTCBHHHHHHHHGG----GCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCGGGCEECCTTC
T ss_pred CCCCHHHHHHhccc----CCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCChhhEEECCCCCEEEcccccceecccCC
Confidence 99999999976432 4899999999999999999999998 9999999999999999999999999998764322
Q ss_pred ------cccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchh--------hHHHHHHHHhhccc
Q 006922 482 ------PVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELV--------HLVRWVHSVVREEW 547 (625)
Q Consensus 482 ------~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~--------~~~~~~~~~~~~~~ 547 (625)
....++..|+|||.+.+..++.++||||||+++|||++|+.||......... .....+........
T Consensus 182 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (327)
T 3lxl_A 182 DYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQ 261 (327)
T ss_dssp SEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHTTC
T ss_pred ccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhhccc
Confidence 1234566799999998888999999999999999999999998643211000 00011111111110
Q ss_pred ccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCCCC
Q 006922 548 TAEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPNDSE 603 (625)
Q Consensus 548 ~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~~~ 603 (625)
..+.......++.+++.+||+.||++|||+.|+++.|+.+......
T Consensus 262 ----------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~ 307 (327)
T 3lxl_A 262 ----------RLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSRG 307 (327)
T ss_dssp ----------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC------
T ss_pred ----------CCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhcC
Confidence 1111222334677888899999999999999999999998765543
No 129
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=4.2e-40 Score=339.72 Aligned_cols=252 Identities=23% Similarity=0.339 Sum_probs=198.9
Q ss_pred hHcccCCceeEEEEEE-----cCCcEEEEEEeccccC--ChHHHHHHHHHHHcCCCCceecceeEEEec--CceEEEEEe
Q 006922 330 EVLGKGTFGMAYKAIL-----EDGTTVVVKRLKDVNV--GKRDFEQQMEIVGSIRHENVVELKAYYYSK--DEKLMVYDY 400 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~-----~~g~~vavK~l~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv~e~ 400 (625)
+.||+|+||+||++.. .+|+.||||+++.... ..+.+.+|++++.+++||||+++++++.+. ...++||||
T Consensus 37 ~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~ 116 (318)
T 3lxp_A 37 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEY 116 (318)
T ss_dssp EEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEEEECC
T ss_pred heecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEEEEec
Confidence 5799999999998864 2688999999986532 235689999999999999999999999884 567999999
Q ss_pred ccCCChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEeccccccccccc
Q 006922 401 YSLGSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSAL 480 (625)
Q Consensus 401 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~ 480 (625)
+++|+|.+++.... +++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 117 ~~~~~L~~~l~~~~------~~~~~~~~i~~~l~~~l~~LH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 187 (318)
T 3lxp_A 117 VPLGSLRDYLPRHS------IGLAQLLLFAQQICEGMAYLHAQH---YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEG 187 (318)
T ss_dssp CTTCBHHHHGGGSC------CCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCGGGCEECCTT
T ss_pred ccCCcHHHHHhhCC------CCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCchheEEEcCCCCEEECCcccccccccc
Confidence 99999999997542 899999999999999999999998 999999999999999999999999999876532
Q ss_pred c------cccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcc--------hhhHHHHHHHHhhcc
Q 006922 481 A------PVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDE--------LVHLVRWVHSVVREE 546 (625)
Q Consensus 481 ~------~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~--------~~~~~~~~~~~~~~~ 546 (625)
. ....++..|+|||.+.+..++.++||||||+++|||+||+.||....... .......+...+...
T Consensus 188 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (318)
T 3lxp_A 188 HEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERG 267 (318)
T ss_dssp CSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTT
T ss_pred ccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhcc
Confidence 2 22345667999999988889999999999999999999999996432110 000000111111111
Q ss_pred cccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCC
Q 006922 547 WTAEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPN 600 (625)
Q Consensus 547 ~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~ 600 (625)
. ..+.......++.+++.+||+.||++|||+.|+++.|+.+...
T Consensus 268 ~----------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~ 311 (318)
T 3lxp_A 268 E----------RLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEK 311 (318)
T ss_dssp C----------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred c----------CCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHh
Confidence 0 1111222335678888899999999999999999999988654
No 130
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=3.5e-39 Score=339.48 Aligned_cols=244 Identities=15% Similarity=0.222 Sum_probs=197.0
Q ss_pred hHcccCCceeEEEEE------EcCCcEEEEEEeccccCChHHHHHHHHHHHcCC---CCceecceeEEEecCceEEEEEe
Q 006922 330 EVLGKGTFGMAYKAI------LEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIR---HENVVELKAYYYSKDEKLMVYDY 400 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~------~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~~~~~~lv~e~ 400 (625)
+.||+|+||+||+|. ..+++.||||+++.. ...++.+|++++..++ |+||+.+++++...+..++||||
T Consensus 71 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~~~lv~e~ 148 (365)
T 3e7e_A 71 HLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA--NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVGEL 148 (365)
T ss_dssp EEEEECSSEEEEEEEC-------CCCCEEEEEESSC--CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSCEEEEECC
T ss_pred EEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC--ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCCcEEEEec
Confidence 579999999999993 456899999999754 3567888888888886 99999999999999999999999
Q ss_pred ccCCChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCC-----------CCCeeEe
Q 006922 401 YSLGSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNS-----------QQYGCVS 469 (625)
Q Consensus 401 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~-----------~~~~kl~ 469 (625)
+++|+|.+++..........++|..+..|+.|+++||+|||+.+ |+||||||+|||++. ++.+||+
T Consensus 149 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~---ivHrDiKp~NIll~~~~~~~~~~~~~~~~~kl~ 225 (365)
T 3e7e_A 149 YSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCE---IIHGDIKPDNFILGNGFLEQDDEDDLSAGLALI 225 (365)
T ss_dssp CCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECGGGTCC------CTTEEEC
T ss_pred cCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCC---eecCCCCHHHEEecccccCccccccccCCEEEe
Confidence 99999999998654333446999999999999999999999988 999999999999998 8999999
Q ss_pred cccccccccc-----cccccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhh
Q 006922 470 DLGLTTITSA-----LAPVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVR 544 (625)
Q Consensus 470 DfGla~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~ 544 (625)
|||+|+.... ......||.+|+|||++.+..++.++|||||||++|||+||+.||.........
T Consensus 226 DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~----------- 294 (365)
T 3e7e_A 226 DLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECK----------- 294 (365)
T ss_dssp CCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEEE-----------
T ss_pred eCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCcee-----------
Confidence 9999976431 123356899999999999999999999999999999999999999643221110
Q ss_pred cccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCC-CCHHHHHHHHHhhCCC
Q 006922 545 EEWTAEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQR-PKMPDVVRVIENVRPN 600 (625)
Q Consensus 545 ~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~R-Ps~~ev~~~L~~~~~~ 600 (625)
.+......+ ..+ .+.+++..|++.+|.+| |+++++.+.|++....
T Consensus 295 -------~~~~~~~~~-~~~---~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~ 340 (365)
T 3e7e_A 295 -------PEGLFRRLP-HLD---MWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQ 340 (365)
T ss_dssp -------ECSCCTTCS-SHH---HHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHH
T ss_pred -------echhccccC-cHH---HHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHH
Confidence 011111112 233 34456669999999998 6888888888876543
No 131
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=1.5e-39 Score=329.00 Aligned_cols=237 Identities=22% Similarity=0.360 Sum_probs=193.4
Q ss_pred hHcccCCceeEEEEEEc-CCcEEEEEEecccc----CChHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccCC
Q 006922 330 EVLGKGTFGMAYKAILE-DGTTVVVKRLKDVN----VGKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLG 404 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 404 (625)
+.||+|+||+||+|... ++..||+|++.... .....+.+|++++.+++||||+++++++.+.+..++||||+++|
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 94 (279)
T 3fdn_A 15 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLG 94 (279)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCTTE
T ss_pred eEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEEEecCCCC
Confidence 56999999999999855 57899999996532 22456889999999999999999999999999999999999999
Q ss_pred ChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEeccccccccccc-ccc
Q 006922 405 SVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSAL-APV 483 (625)
Q Consensus 405 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~-~~~ 483 (625)
+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++...... ...
T Consensus 95 ~l~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~LH~~~---i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~ 166 (279)
T 3fdn_A 95 TVYRELQKLS-----KFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTD 166 (279)
T ss_dssp EHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHTTT---CEECCCCGGGEEECTTSCEEECSCCEESCC-------
T ss_pred cHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhCC---EecccCChHhEEEcCCCCEEEEeccccccCCcccccc
Confidence 9999997653 3899999999999999999999987 999999999999999999999999998765432 234
Q ss_pred cccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccccccccccCCCCcH
Q 006922 484 IARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIE 563 (625)
Q Consensus 484 ~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 563 (625)
..++..|+|||.+.+..++.++||||||+++|||++|+.||......+....+. . .. .....
T Consensus 167 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~---~---~~------------~~~~~ 228 (279)
T 3fdn_A 167 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS---R---VE------------FTFPD 228 (279)
T ss_dssp -CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHH---H---TC------------CCCCT
T ss_pred cCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHH---h---CC------------CCCCC
Confidence 568889999999999999999999999999999999999997644322221111 1 00 00011
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006922 564 EEMVEMLQIAMSCVVRMPDQRPKMPDVVR 592 (625)
Q Consensus 564 ~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 592 (625)
....++.+++.+||+.||.+|||+.|+++
T Consensus 229 ~~~~~~~~li~~~l~~~p~~Rps~~e~l~ 257 (279)
T 3fdn_A 229 FVTEGARDLISRLLKHNPSQRPMLREVLE 257 (279)
T ss_dssp TSCHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred cCCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 12235667888999999999999999996
No 132
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=5.1e-40 Score=355.22 Aligned_cols=238 Identities=23% Similarity=0.319 Sum_probs=188.3
Q ss_pred HhHcccCCceeEEEEEE-cCCcEEEEEEecccc----CChHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccC
Q 006922 329 AEVLGKGTFGMAYKAIL-EDGTTVVVKRLKDVN----VGKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSL 403 (625)
Q Consensus 329 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 403 (625)
.+.||+|+||+||+|.. .+|+.||||+++... .....+.+|++++..++||||+++++++...+..++||||+++
T Consensus 153 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~ 232 (446)
T 4ejn_A 153 LKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANG 232 (446)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEEECCCSS
T ss_pred eEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEEEeeCCC
Confidence 35799999999999995 468999999997532 2235677899999999999999999999999999999999999
Q ss_pred CChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHh-cCCCCceecCCCCCCEEeCCCCCeeEecccccccccc---
Q 006922 404 GSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHA-ANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSA--- 479 (625)
Q Consensus 404 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~-~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~--- 479 (625)
|+|.+++.... .+++..+..++.|++.||+|||+ .+ |+||||||+|||++.++.+||+|||+++....
T Consensus 233 ~~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~~g---iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 304 (446)
T 4ejn_A 233 GELFFHLSRER-----VFSEDRARFYGAEIVSALDYLHSEKN---VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA 304 (446)
T ss_dssp CBHHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHHTC---CCCCCCCGGGEEECSSSCEEECCCCCCCTTCC---
T ss_pred CcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHhhcCC---EEECCCCHHHEEECCCCCEEEccCCCceeccCCCc
Confidence 99999997643 48999999999999999999998 76 99999999999999999999999999986432
Q ss_pred cccccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccccccccccCC
Q 006922 480 LAPVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRY 559 (625)
Q Consensus 480 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 559 (625)
......||..|+|||++.+..++.++|||||||++|||++|+.||......+....+. .... ..
T Consensus 305 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~------~~~~----------~~ 368 (446)
T 4ejn_A 305 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL------MEEI----------RF 368 (446)
T ss_dssp --CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH------HCCC----------CC
T ss_pred ccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHH------hCCC----------CC
Confidence 2234578999999999999999999999999999999999999997654332222111 1110 00
Q ss_pred CCcHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 006922 560 PNIEEEMVEMLQIAMSCVVRMPDQRP-----KMPDVVR 592 (625)
Q Consensus 560 ~~~~~~~~~l~~l~~~Cl~~~P~~RP-----s~~ev~~ 592 (625)
+ .....++.+++.+||+.||.+|| ++.|+++
T Consensus 369 p--~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 369 P--RTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp C--TTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred C--ccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 1 11223567788899999999999 9999975
No 133
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=2.1e-39 Score=351.14 Aligned_cols=237 Identities=23% Similarity=0.337 Sum_probs=196.2
Q ss_pred hHcccCCceeEEEEEEc-CCcEEEEEEecccc----CChHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccCC
Q 006922 330 EVLGKGTFGMAYKAILE-DGTTVVVKRLKDVN----VGKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLG 404 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 404 (625)
+.||+|+||+||+|... +|+.||||+++... ...+.+.+|++++..++||||+++++++...+..++||||+++|
T Consensus 22 ~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~E~~~gg 101 (476)
T 2y94_A 22 DTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGG 101 (476)
T ss_dssp EEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCSSE
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCCC
Confidence 56999999999999965 79999999997542 22357889999999999999999999999999999999999999
Q ss_pred ChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEeccccccccccc--cc
Q 006922 405 SVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSAL--AP 482 (625)
Q Consensus 405 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~--~~ 482 (625)
+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++..... ..
T Consensus 102 ~L~~~l~~~~-----~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~~~~ 173 (476)
T 2y94_A 102 ELFDYICKNG-----RLDEKESRRLFQQILSGVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLR 173 (476)
T ss_dssp EHHHHTTSSS-----SCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCSGGGEEECTTCCEEECCCSSCEECCTTCCBC
T ss_pred cHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---CCcccccHHHEEEecCCCeEEEeccchhhcccccccc
Confidence 9999997532 4899999999999999999999998 999999999999999999999999999876432 23
Q ss_pred ccccCCCcCCccccCCCCC-CCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccccccccccCCCC
Q 006922 483 VIARAAGYRAPEVTDSRKA-TQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPN 561 (625)
Q Consensus 483 ~~~~~~~y~aPE~~~~~~~-~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 561 (625)
...||+.|+|||++.+..+ +.++||||+||++|||++|+.||......+.... ..... + ..+
T Consensus 174 ~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~------i~~~~-----~-----~~p- 236 (476)
T 2y94_A 174 TSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKK------ICDGI-----F-----YTP- 236 (476)
T ss_dssp CCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHH------HHTTC-----C-----CCC-
T ss_pred ccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHH------HhcCC-----c-----CCC-
Confidence 4568899999999988776 6899999999999999999999976543322211 11110 0 001
Q ss_pred cHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006922 562 IEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR 592 (625)
Q Consensus 562 ~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 592 (625)
.....++.+++.+||..||.+|||+.|+++
T Consensus 237 -~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~ 266 (476)
T 2y94_A 237 -QYLNPSVISLLKHMLQVDPMKRATIKDIRE 266 (476)
T ss_dssp -TTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred -ccCCHHHHHHHHHHcCCCchhCcCHHHHHh
Confidence 111235677888999999999999999986
No 134
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=1.8e-39 Score=339.35 Aligned_cols=241 Identities=19% Similarity=0.324 Sum_probs=181.9
Q ss_pred hHcccCCceeEEEEEEc-CCcEEEEEEeccccCChHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccCCChhh
Q 006922 330 EVLGKGTFGMAYKAILE-DGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLGSVSA 408 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~ 408 (625)
+.||+|+||+||+|... +++.||||+++... ..+.+.+|++++.+++||||+++++++...+..++||||+++|+|.+
T Consensus 59 ~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~ 137 (349)
T 2w4o_A 59 SELGRGATSIVYRCKQKGTQKPYALKVLKKTV-DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFD 137 (349)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEC-----------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHH
T ss_pred eEEeeCCCEEEEEEEECCCCcEEEEEEeccch-hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeCCCCCHHH
Confidence 56999999999999965 58899999998643 34678899999999999999999999999999999999999999999
Q ss_pred hhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCC---CCCeeEeccccccccccc--ccc
Q 006922 409 MLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNS---QQYGCVSDLGLTTITSAL--APV 483 (625)
Q Consensus 409 ~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~---~~~~kl~DfGla~~~~~~--~~~ 483 (625)
++.... .+++..+..++.|++.||+|||+.+ |+||||||+|||++. ++.+||+|||+++..... ...
T Consensus 138 ~l~~~~-----~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~ 209 (349)
T 2w4o_A 138 RIVEKG-----YYSERDAADAVKQILEAVAYLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKT 209 (349)
T ss_dssp HHTTCS-----SCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEESSSSTTCCEEECCCC-------------
T ss_pred HHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCcccEEEecCCCCCCEEEccCccccccCccccccc
Confidence 987542 4899999999999999999999998 999999999999975 889999999999876432 233
Q ss_pred cccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccccccccccCCCCcH
Q 006922 484 IARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIE 563 (625)
Q Consensus 484 ~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 563 (625)
..||..|+|||++.+..++.++|||||||++|||++|+.||......+. ... ....... .... +...
T Consensus 210 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~--~~~---~i~~~~~--~~~~------~~~~ 276 (349)
T 2w4o_A 210 VCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQF--MFR---RILNCEY--YFIS------PWWD 276 (349)
T ss_dssp ---CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHH--HHH---HHHTTCC--CCCT------TTTT
T ss_pred ccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHH--HHH---HHHhCCC--ccCC------chhh
Confidence 5688899999999999999999999999999999999999976543221 111 1111110 0000 1111
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006922 564 EEMVEMLQIAMSCVVRMPDQRPKMPDVVR 592 (625)
Q Consensus 564 ~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 592 (625)
....++.+++.+|++.||++|||+.|+++
T Consensus 277 ~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 277 EVSLNAKDLVRKLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp TSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred hCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 22345677888999999999999999986
No 135
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=6.8e-40 Score=344.91 Aligned_cols=237 Identities=23% Similarity=0.317 Sum_probs=185.7
Q ss_pred HhHcccCCceeEEEEEEc-CCcEEEEEEeccccCC----hHHHHHHHHH-HHcCCCCceecceeEEEecCceEEEEEecc
Q 006922 329 AEVLGKGTFGMAYKAILE-DGTTVVVKRLKDVNVG----KRDFEQQMEI-VGSIRHENVVELKAYYYSKDEKLMVYDYYS 402 (625)
Q Consensus 329 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~----~~~~~~e~~~-l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 402 (625)
.+.||+|+||+||+++.. +++.||+|++++.... .+.+.+|..+ +..++||||+++++++.+.+..++||||++
T Consensus 43 ~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~ 122 (373)
T 2r5t_A 43 LKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYIN 122 (373)
T ss_dssp EEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred EEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEEEeCCC
Confidence 367999999999999965 5889999999765322 2345666666 567899999999999999999999999999
Q ss_pred CCChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEeccccccccc---c
Q 006922 403 LGSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITS---A 479 (625)
Q Consensus 403 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~---~ 479 (625)
+|+|.+++.... .+++..+..++.|++.||+|||+++ |+||||||+|||++.++++||+|||+++... .
T Consensus 123 gg~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~~ 194 (373)
T 2r5t_A 123 GGELFYHLQRER-----CFLEPRARFYAAEIASALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNS 194 (373)
T ss_dssp SCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCCC
T ss_pred CCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEECCCCCEEEeeCccccccccCCC
Confidence 999999997643 3889999999999999999999998 9999999999999999999999999998642 2
Q ss_pred cccccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccccccccccCC
Q 006922 480 LAPVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRY 559 (625)
Q Consensus 480 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 559 (625)
......||..|+|||++.+..++.++|||||||++|||++|+.||......+....+ .... ..-.
T Consensus 195 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i------~~~~---------~~~~ 259 (373)
T 2r5t_A 195 TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNI------LNKP---------LQLK 259 (373)
T ss_dssp CCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHH------HHSC---------CCCC
T ss_pred ccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHH------Hhcc---------cCCC
Confidence 234457899999999999999999999999999999999999999764432222111 1110 0001
Q ss_pred CCcHHHHHHHHHHHHHccCCCCCCCCCHHHHH
Q 006922 560 PNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVV 591 (625)
Q Consensus 560 ~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~ 591 (625)
+.. ..++.+++.+|++.||.+||++.+.+
T Consensus 260 ~~~---~~~~~~li~~lL~~dp~~R~~~~~~~ 288 (373)
T 2r5t_A 260 PNI---TNSARHLLEGLLQKDRTKRLGAKDDF 288 (373)
T ss_dssp SSS---CHHHHHHHHHHTCSSGGGSTTTTTTH
T ss_pred CCC---CHHHHHHHHHHcccCHHhCCCCCCCH
Confidence 112 23566777899999999999985433
No 136
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=8.1e-40 Score=347.24 Aligned_cols=190 Identities=28% Similarity=0.435 Sum_probs=155.1
Q ss_pred hHcccCCceeEEEEEE-cCCcEEEEEEeccccCC---hHHHHHHHHHHHcCC-CCceecceeEEEecC--ceEEEEEecc
Q 006922 330 EVLGKGTFGMAYKAIL-EDGTTVVVKRLKDVNVG---KRDFEQQMEIVGSIR-HENVVELKAYYYSKD--EKLMVYDYYS 402 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~---~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~--~~~lv~e~~~ 402 (625)
+.||+|+||+||+|.. .+|+.||||++...... .+.+.+|+.++.++. ||||+++++++...+ ..++|||||+
T Consensus 15 ~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~lv~e~~~ 94 (388)
T 3oz6_A 15 KKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYME 94 (388)
T ss_dssp EC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEEEEECCS
T ss_pred EEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEEEecccC
Confidence 5699999999999995 46999999999754322 355778999999997 999999999998654 6899999998
Q ss_pred CCChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEecccccccccc---
Q 006922 403 LGSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSA--- 479 (625)
Q Consensus 403 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~--- 479 (625)
++|..++... .+++..+..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 95 -~~L~~~~~~~------~~~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 164 (388)
T 3oz6_A 95 -TDLHAVIRAN------ILEPVHKQYVVYQLIKVIKYLHSGG---LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRR 164 (388)
T ss_dssp -EEHHHHHHHT------CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEESSSCCC
T ss_pred -cCHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHeEEcCCCCEEecCCccccccccccc
Confidence 5898888753 3899999999999999999999998 99999999999999999999999999986532
Q ss_pred ---------------------cccccccCCCcCCccccCC-CCCCCccchhhhHHHHHHHHhCCCCCCCCCC
Q 006922 480 ---------------------LAPVIARAAGYRAPEVTDS-RKATQASDVYSFGVVLLEILTGKSPIHTTGG 529 (625)
Q Consensus 480 ---------------------~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwS~Gvil~elltG~~p~~~~~~ 529 (625)
......+|..|+|||++.+ ..++.++||||+||++|||++|+.||.+.+.
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~ 236 (388)
T 3oz6_A 165 VTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSST 236 (388)
T ss_dssp CCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred ccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCH
Confidence 1122468888999999876 6789999999999999999999999986543
No 137
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.3e-39 Score=328.57 Aligned_cols=236 Identities=19% Similarity=0.288 Sum_probs=173.5
Q ss_pred hHcccCCceeEEEEEE-cCCcEEEEEEeccccC----ChHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccCC
Q 006922 330 EVLGKGTFGMAYKAIL-EDGTTVVVKRLKDVNV----GKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLG 404 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~----~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 404 (625)
+.||+|+||+||+|.. .+|+.||+|++..... ..+.+.+|++++++++||||+++++++.+.+..++||||+ ++
T Consensus 19 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~-~~ 97 (275)
T 2eue_A 19 KTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-GN 97 (275)
T ss_dssp C---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEEECC-CE
T ss_pred EEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEehhc-CC
Confidence 5699999999999984 5789999999976432 2457889999999999999999999999999999999999 66
Q ss_pred ChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEecccccccccccc--c
Q 006922 405 SVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALA--P 482 (625)
Q Consensus 405 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~--~ 482 (625)
++.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++....... .
T Consensus 98 ~l~~~~~~~~-----~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 169 (275)
T 2eue_A 98 ELFDYIVQRD-----KMSEQEARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLK 169 (275)
T ss_dssp EHHHHHHTSS-----SCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTSCEEECCSSCC----------
T ss_pred cHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---CeeccCChHhEEECCCCCEEEeecccceeccCccccc
Confidence 8877776532 3899999999999999999999998 9999999999999999999999999998664322 3
Q ss_pred ccccCCCcCCccccCCCCC-CCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccccccccccCCCC
Q 006922 483 VIARAAGYRAPEVTDSRKA-TQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPN 561 (625)
Q Consensus 483 ~~~~~~~y~aPE~~~~~~~-~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 561 (625)
...++..|+|||.+.+..+ +.++||||||+++|||++|+.||......+.. ..+. .... +.
T Consensus 170 ~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~---~~~~---~~~~------------~~ 231 (275)
T 2eue_A 170 TSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLF---KNIS---NGVY------------TL 231 (275)
T ss_dssp -----CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHHHHH---HHHH---HTCC------------CC
T ss_pred CCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHH---HHHH---hCCC------------CC
Confidence 3467889999999987765 78999999999999999999999764422221 1111 1100 00
Q ss_pred cHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006922 562 IEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR 592 (625)
Q Consensus 562 ~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 592 (625)
.......+.+++.+|++.||.+|||+.|+++
T Consensus 232 ~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 262 (275)
T 2eue_A 232 PKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp CTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred CccCCHHHHHHHHHHhhcCHhHCCCHHHHhh
Confidence 1112235677888999999999999999975
No 138
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=4.8e-40 Score=341.37 Aligned_cols=252 Identities=21% Similarity=0.328 Sum_probs=200.5
Q ss_pred HhHcccCCceeEEEEEEcC-C-----cEEEEEEeccccC--ChHHHHHHHHHHHcC-CCCceecceeEEEecCceEEEEE
Q 006922 329 AEVLGKGTFGMAYKAILED-G-----TTVVVKRLKDVNV--GKRDFEQQMEIVGSI-RHENVVELKAYYYSKDEKLMVYD 399 (625)
Q Consensus 329 ~~~lg~G~~g~Vy~~~~~~-g-----~~vavK~l~~~~~--~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e 399 (625)
.+.||+|+||+||+|.... + ..||+|+++.... ..+.+.+|++++.++ +||||+++++++...+..++|||
T Consensus 51 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e 130 (333)
T 2i1m_A 51 GKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITE 130 (333)
T ss_dssp EEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCceEEEEe
Confidence 3679999999999999542 2 4799999986532 235688999999999 89999999999999999999999
Q ss_pred eccCCChhhhhccccCC---------CCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEec
Q 006922 400 YYSLGSVSAMLHSERGE---------GRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSD 470 (625)
Q Consensus 400 ~~~~g~L~~~l~~~~~~---------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~D 470 (625)
|+++|+|.+++...... ....+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|
T Consensus 131 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~D 207 (333)
T 2i1m_A 131 YCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVLLTNGHVAKIGD 207 (333)
T ss_dssp CCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGCEEEGGGEEEBCC
T ss_pred cCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCC---cccCCcccceEEECCCCeEEECc
Confidence 99999999998754210 1234799999999999999999999998 99999999999999999999999
Q ss_pred ccccccccccc-----cccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHh-CCCCCCCCCCcchhhHHHHHHHHhh
Q 006922 471 LGLTTITSALA-----PVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVR 544 (625)
Q Consensus 471 fGla~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~ 544 (625)
||+++...... ....++..|+|||.+.+..++.++|||||||++|||+| |..||......+.. ...+.
T Consensus 208 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~--~~~~~---- 281 (333)
T 2i1m_A 208 FGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKF--YKLVK---- 281 (333)
T ss_dssp CGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHH--HHHHH----
T ss_pred cccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHH--HHHHh----
Confidence 99998653322 12345667999999988889999999999999999999 99999765443321 11111
Q ss_pred cccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCC
Q 006922 545 EEWTAEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRP 599 (625)
Q Consensus 545 ~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~ 599 (625)
..... ........++.+++.+||+.||.+|||+.|+++.|+++..
T Consensus 282 ~~~~~----------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~ 326 (333)
T 2i1m_A 282 DGYQM----------AQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQ 326 (333)
T ss_dssp HTCCC----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cCCCC----------CCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHH
Confidence 11000 0011112467788889999999999999999999988754
No 139
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=2.9e-39 Score=350.65 Aligned_cols=251 Identities=15% Similarity=0.188 Sum_probs=200.2
Q ss_pred hHcccCCceeEEEEEE-cCCcEEEEEEeccccCChHHHHHHHHHHHcCCC-CceecceeEEEecCceEEEEEeccCCChh
Q 006922 330 EVLGKGTFGMAYKAIL-EDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRH-ENVVELKAYYYSKDEKLMVYDYYSLGSVS 407 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h-~niv~l~~~~~~~~~~~lv~e~~~~g~L~ 407 (625)
+.||+|+||+||+|.. .+++.||||+++... ...++.+|++++..++| +++..+..++...+..++||||+ +++|.
T Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-~~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~-g~sL~ 90 (483)
T 3sv0_A 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-KHPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL-GPSLE 90 (483)
T ss_dssp CCCEECSSCEEEEEEETTTCCEEEEEEEETTC-SSCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECC-CCBHH
T ss_pred EEEeeCCCEEEEEEEECCCCcEEEEEEecccc-ccHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECC-CCCHH
Confidence 5699999999999995 579999999887543 23568899999999987 45555566666777889999999 99999
Q ss_pred hhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEe---CCCCCeeEeccccccccccccc--
Q 006922 408 AMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFL---NSQQYGCVSDLGLTTITSALAP-- 482 (625)
Q Consensus 408 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll---~~~~~~kl~DfGla~~~~~~~~-- 482 (625)
+++..... .+++..+..|+.||+.||+|||+++ |+||||||+|||+ +.++.+||+|||+++.......
T Consensus 91 ~ll~~~~~----~l~~~~~~~i~~qi~~aL~yLH~~g---IvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~ 163 (483)
T 3sv0_A 91 DLFNFCSR----KLSLKTVLMLADQMINRVEFVHSKS---FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQ 163 (483)
T ss_dssp HHHHHTTT----CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCC
T ss_pred HHHHhhcC----CCCHHHHHHHHHHHHHHHHHHHHCC---EeecccCcceEEEecCCCCCeEEEEeCCcceeccCCcccc
Confidence 99975432 4999999999999999999999998 9999999999999 6889999999999987643221
Q ss_pred --------ccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccccccc
Q 006922 483 --------VIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDV 554 (625)
Q Consensus 483 --------~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 554 (625)
...||..|+|||.+.+..++.++|||||||++|||++|+.||..............+...........+.
T Consensus 164 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~-- 241 (483)
T 3sv0_A 164 HIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSIEALC-- 241 (483)
T ss_dssp BCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCHHHHH--
T ss_pred ccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccHHHHh--
Confidence 4568889999999999999999999999999999999999998766554444433322221111100000
Q ss_pred cccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCC
Q 006922 555 ELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRP 599 (625)
Q Consensus 555 ~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~ 599 (625)
. ....++.+++..||+.+|++||++.+|++.|+++..
T Consensus 242 --~------~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~ 278 (483)
T 3sv0_A 242 --R------GYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFI 278 (483)
T ss_dssp --T------TSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHH
T ss_pred --c------CCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence 0 112467888889999999999999999999988844
No 140
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=7.2e-40 Score=351.84 Aligned_cols=194 Identities=21% Similarity=0.312 Sum_probs=170.9
Q ss_pred hHcccCCceeEEEEEEc-CCcEEEEEEeccccCChHHHHHHHHHHHcC------CCCceecceeEEEecCceEEEEEecc
Q 006922 330 EVLGKGTFGMAYKAILE-DGTTVVVKRLKDVNVGKRDFEQQMEIVGSI------RHENVVELKAYYYSKDEKLMVYDYYS 402 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~e~~~l~~l------~h~niv~l~~~~~~~~~~~lv~e~~~ 402 (625)
+.||+|+||+||+|... +++.||||+++......+.+.+|++++..+ +|+||+++++++...+..++||||+.
T Consensus 103 ~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~ 182 (429)
T 3kvw_A 103 KVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLS 182 (429)
T ss_dssp EEEEESSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEEEEECCCC
T ss_pred EEcccCccEEEEEEEECCCCcEEEEEEECCccchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEEEEEeccC
Confidence 67999999999999854 589999999987544456778888888776 57799999999999999999999997
Q ss_pred CCChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCC--eeEeccccccccccc
Q 006922 403 LGSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQY--GCVSDLGLTTITSAL 480 (625)
Q Consensus 403 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~--~kl~DfGla~~~~~~ 480 (625)
++|.+++..... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++. +||+|||+++.....
T Consensus 183 -~~L~~~l~~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~~~ 255 (429)
T 3kvw_A 183 -MNLYELIKKNKF---QGFSLPLVRKFAHSILQCLDALHKNR---IIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQR 255 (429)
T ss_dssp -CBHHHHHHHTTT---CCCCHHHHHHHHHHHHHHHHHHHHHT---EECSCCSGGGEEESSTTSCCEEECCCTTCEETTCC
T ss_pred -CCHHHHHHhccC---CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEEccCCCcceEEeecccceecCCc
Confidence 589998876542 24899999999999999999999998 999999999999999987 999999999877666
Q ss_pred ccccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCc
Q 006922 481 APVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGD 530 (625)
Q Consensus 481 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~ 530 (625)
.....+|..|+|||++.+..++.++|||||||++|||+||+.||......
T Consensus 256 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~ 305 (429)
T 3kvw_A 256 VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEG 305 (429)
T ss_dssp CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHH
Confidence 66667899999999999999999999999999999999999999765443
No 141
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.4e-39 Score=334.44 Aligned_cols=255 Identities=17% Similarity=0.288 Sum_probs=192.7
Q ss_pred hHcccCCceeEEEEEEc-CCcEEEEEEeccccCC---hHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccCCC
Q 006922 330 EVLGKGTFGMAYKAILE-DGTTVVVKRLKDVNVG---KRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLGS 405 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 405 (625)
+.||+|+||+||+|... +|+.||+|++...... .+.+.+|++++.+++||||+++++++...+..++||||+++++
T Consensus 9 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 88 (311)
T 4agu_A 9 GKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTV 88 (311)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSEEH
T ss_pred eEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEEeCCCch
Confidence 56999999999999965 5899999999765433 3567899999999999999999999999999999999999999
Q ss_pred hhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEecccccccccccc---c
Q 006922 406 VSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALA---P 482 (625)
Q Consensus 406 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~---~ 482 (625)
|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++...... .
T Consensus 89 l~~~~~~~~-----~~~~~~~~~i~~~l~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 160 (311)
T 4agu_A 89 LHELDRYQR-----GVPEHLVKSITWQTLQAVNFCHKHN---CIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYD 160 (311)
T ss_dssp HHHHHHTSS-----CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECC-------
T ss_pred HHHHHhhhc-----CCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCCChhhEEEcCCCCEEEeeCCCchhccCcccccC
Confidence 998876543 3899999999999999999999998 9999999999999999999999999998765322 2
Q ss_pred ccccCCCcCCccccCC-CCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHH--------Hh-hcccccccc
Q 006922 483 VIARAAGYRAPEVTDS-RKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHS--------VV-REEWTAEVF 552 (625)
Q Consensus 483 ~~~~~~~y~aPE~~~~-~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~--------~~-~~~~~~~~~ 552 (625)
...++..|+|||++.+ ..++.++||||||+++|||++|+.||......+....+..... .. ...+.....
T Consensus 161 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (311)
T 4agu_A 161 DEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVK 240 (311)
T ss_dssp -----GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTTCC
T ss_pred CCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccccccCc
Confidence 3467888999999865 6789999999999999999999999976554333222211100 00 000000000
Q ss_pred cccccCCCCc----HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006922 553 DVELLRYPNI----EEEMVEMLQIAMSCVVRMPDQRPKMPDVVR 592 (625)
Q Consensus 553 d~~~~~~~~~----~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 592 (625)
.+........ .....++.+++.+||+.||.+|||++|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 284 (311)
T 4agu_A 241 IPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH 284 (311)
T ss_dssp CCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred CCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 0000000000 112335778888999999999999999986
No 142
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=8.4e-40 Score=339.91 Aligned_cols=260 Identities=23% Similarity=0.346 Sum_probs=192.3
Q ss_pred hHcccCCceeEEEEEEcCCcEEEEEEeccccCChHHHHHHHHH--HHcCCCCceecceeEEEec-----CceEEEEEecc
Q 006922 330 EVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEI--VGSIRHENVVELKAYYYSK-----DEKLMVYDYYS 402 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~e~~~--l~~l~h~niv~l~~~~~~~-----~~~~lv~e~~~ 402 (625)
+.||+|+||+||+|.. +++.||||+++... ...+..|.++ +..++||||+++++++... ...++||||++
T Consensus 19 ~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~--~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~ 95 (336)
T 3g2f_A 19 ELIGRGRYGAVYKGSL-DERPVAVKVFSFAN--RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYP 95 (336)
T ss_dssp EEEEECSSEEEEEEEE-TTEEEEEEEEEGGG--HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEEECCCT
T ss_pred eecccCCCeEEEEEEE-CCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEEEEecCC
Confidence 5799999999999976 58999999997543 2344444444 5568999999999876532 25689999999
Q ss_pred CCChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhc---------CCCCceecCCCCCCEEeCCCCCeeEecccc
Q 006922 403 LGSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAA---------NGGKLVHGNIKSSNIFLNSQQYGCVSDLGL 473 (625)
Q Consensus 403 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~---------~~~~ivHrDlk~~NIll~~~~~~kl~DfGl 473 (625)
+|+|.+++.... .++..+..++.|+++||+|||+. + |+||||||+|||++.++.+||+|||+
T Consensus 96 ~g~L~~~l~~~~------~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~---ivH~Dikp~Nill~~~~~~kL~DFG~ 166 (336)
T 3g2f_A 96 NGSLXKYLSLHT------SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPA---ISHRDLNSRNVLVKNDGTCVISDFGL 166 (336)
T ss_dssp TCBHHHHHHHCC------BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCC---EECSSCSGGGEEECTTSCEEECCCTT
T ss_pred CCcHHHHHhhcc------cchhHHHHHHHHHHHHHHHHHhhhccccccccc---eeecccccceEEEcCCCcEEEeeccc
Confidence 999999997543 68999999999999999999998 6 99999999999999999999999999
Q ss_pred ccccccc-----------ccccccCCCcCCccccCC-------CCCCCccchhhhHHHHHHHHhCCCCCCCCCCc-chhh
Q 006922 474 TTITSAL-----------APVIARAAGYRAPEVTDS-------RKATQASDVYSFGVVLLEILTGKSPIHTTGGD-ELVH 534 (625)
Q Consensus 474 a~~~~~~-----------~~~~~~~~~y~aPE~~~~-------~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~-~~~~ 534 (625)
++..... .....||..|+|||++.+ ..++.++|||||||++|||++|+.||...... +...
T Consensus 167 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~ 246 (336)
T 3g2f_A 167 SMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQM 246 (336)
T ss_dssp CEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCC
T ss_pred eeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHH
Confidence 9865421 112357889999999976 45677999999999999999997776543221 1110
Q ss_pred HH----------HHHHHHhhcccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCCCCC
Q 006922 535 LV----------RWVHSVVREEWTAEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPNDSEN 604 (625)
Q Consensus 535 ~~----------~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~~~~ 604 (625)
.. ...............+. ...+.......++.+++.+||+.||++|||+.|+++.|+++...-..+
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~~~ 323 (336)
T 3g2f_A 247 AFQTEVGNHPTFEDMQVLVSREKQRPKFP---EAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWERN 323 (336)
T ss_dssp TTHHHHCSSCCHHHHHHHHTTSCCCCCCC---TTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCCCC-
T ss_pred hhhcccCCCchHHHHHhhhcccccCCCCC---cccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHHHhc
Confidence 00 00111111110000000 011122345567889999999999999999999999999987654433
No 143
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.1e-39 Score=344.88 Aligned_cols=266 Identities=15% Similarity=0.217 Sum_probs=206.2
Q ss_pred hHcccCCceeEEEEEEc-CCcEEEEEEecccc--CChHHHHHHHHHHHcCCCCceecceeEEEecC--ceEEEEEeccCC
Q 006922 330 EVLGKGTFGMAYKAILE-DGTTVVVKRLKDVN--VGKRDFEQQMEIVGSIRHENVVELKAYYYSKD--EKLMVYDYYSLG 404 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--~~~lv~e~~~~g 404 (625)
+.||+|+||+||+|... +|+.||||+++... ...+.+.+|++++.+++||||+++++++...+ ..++||||+++|
T Consensus 15 ~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~e~~~~g 94 (396)
T 4eut_A 15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCG 94 (396)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEECCCTTE
T ss_pred EEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEEecCCCC
Confidence 56999999999999965 58999999998643 23467889999999999999999999998765 679999999999
Q ss_pred ChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEe----CCCCCeeEeccccccccccc
Q 006922 405 SVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFL----NSQQYGCVSDLGLTTITSAL 480 (625)
Q Consensus 405 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll----~~~~~~kl~DfGla~~~~~~ 480 (625)
+|.+++...... ..+++..+..++.|++.||+|||+.+ |+||||||+|||+ +.++.+||+|||+++.....
T Consensus 95 ~L~~~l~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~~ 169 (396)
T 4eut_A 95 SLYTVLEEPSNA--YGLPESEFLIVLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD 169 (396)
T ss_dssp EHHHHTTSGGGT--TCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCCG
T ss_pred CHHHHHHhhhcc--cCCCHHHHHHHHHHHHHHHHHHHHCC---EEECCcCHHHEEEeecCCCceeEEEecCCCceEccCC
Confidence 999999865422 23899999999999999999999998 9999999999999 77788999999999876543
Q ss_pred c--cccccCCCcCCccccCC--------CCCCCccchhhhHHHHHHHHhCCCCCCCCCCcc-hhhHHHHHHHHhhccccc
Q 006922 481 A--PVIARAAGYRAPEVTDS--------RKATQASDVYSFGVVLLEILTGKSPIHTTGGDE-LVHLVRWVHSVVREEWTA 549 (625)
Q Consensus 481 ~--~~~~~~~~y~aPE~~~~--------~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~ 549 (625)
. ....+|..|+|||++.+ ..++.++|||||||++|||++|+.||....... ....+..+..........
T Consensus 170 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~~~~~ 249 (396)
T 4eut_A 170 EQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAIS 249 (396)
T ss_dssp GGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCCTTCCE
T ss_pred CccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCCcccch
Confidence 2 23468889999998864 467889999999999999999999997544322 222222111111111111
Q ss_pred ccc---------ccccc-CCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCC
Q 006922 550 EVF---------DVELL-RYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPN 600 (625)
Q Consensus 550 ~~~---------d~~~~-~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~ 600 (625)
.+. ..... ...........+.+++..||+.||++||++.|+++.++.+...
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~ 310 (396)
T 4eut_A 250 GVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR 310 (396)
T ss_dssp EEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred hheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence 000 00000 1122355667788999999999999999999999999887654
No 144
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=2.6e-39 Score=330.41 Aligned_cols=248 Identities=22% Similarity=0.335 Sum_probs=196.0
Q ss_pred hHcccCCceeEEEEEEcC----CcEEEEEEeccccC--ChHHHHHHHHHHHcCCCCceecceeEEEe-cCceEEEEEecc
Q 006922 330 EVLGKGTFGMAYKAILED----GTTVVVKRLKDVNV--GKRDFEQQMEIVGSIRHENVVELKAYYYS-KDEKLMVYDYYS 402 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~~----g~~vavK~l~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~~~lv~e~~~ 402 (625)
+.||+|+||+||+|...+ +..+|+|.++.... ..+.+.+|++++++++||||+++++++.. .+..++||||++
T Consensus 31 ~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~~~ 110 (298)
T 3f66_A 31 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMK 110 (298)
T ss_dssp EEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEEECCT
T ss_pred ceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEEEEeCCC
Confidence 569999999999998542 23689999886432 23568899999999999999999999754 557899999999
Q ss_pred CCChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEecccccccccccc-
Q 006922 403 LGSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALA- 481 (625)
Q Consensus 403 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~- 481 (625)
+|+|.+++.... ..+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 111 ~~~L~~~l~~~~----~~~~~~~~~~i~~ql~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~ 183 (298)
T 3f66_A 111 HGDLRNFIRNET----HNPTVKDLIGFGLQVAKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEY 183 (298)
T ss_dssp TCBHHHHHHCTT----CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGGG
T ss_pred CCCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCchheEEECCCCCEEECcccccccccccch
Confidence 999999997543 24899999999999999999999998 9999999999999999999999999998654321
Q ss_pred ------cccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHh-CCCCCCCCCCcchhhHHHHHHHHhhcccccccccc
Q 006922 482 ------PVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDV 554 (625)
Q Consensus 482 ------~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 554 (625)
....++..|+|||.+.+..++.++||||+|+++|||++ |.+||......+...... ... ..
T Consensus 184 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~------~~~---~~--- 251 (298)
T 3f66_A 184 YSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL------QGR---RL--- 251 (298)
T ss_dssp CBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHH------TTC---CC---
T ss_pred hccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHh------cCC---CC---
Confidence 22345667999999988899999999999999999999 666676544433322111 110 00
Q ss_pred cccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCC
Q 006922 555 ELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPND 601 (625)
Q Consensus 555 ~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~ 601 (625)
.........+.+++.+||+.+|.+|||+.|+++.|+++...-
T Consensus 252 -----~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~ 293 (298)
T 3f66_A 252 -----LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 293 (298)
T ss_dssp -----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTS
T ss_pred -----CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence 001112235778888999999999999999999999986643
No 145
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=7.2e-40 Score=348.78 Aligned_cols=241 Identities=17% Similarity=0.237 Sum_probs=193.3
Q ss_pred hHcccCCceeEEEEEEc-CCcEEEEEEeccccC----ChHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccCC
Q 006922 330 EVLGKGTFGMAYKAILE-DGTTVVVKRLKDVNV----GKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLG 404 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~----~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 404 (625)
+.||+|+||+||+++.. +|+.||+|++++... ..+.+.+|.+++..++||||+++++++.+.+..++||||+++|
T Consensus 67 ~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lVmE~~~gg 146 (412)
T 2vd5_A 67 KVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGG 146 (412)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEcCCCCC
Confidence 57999999999999964 699999999975321 2245889999999999999999999999999999999999999
Q ss_pred ChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEecccccccccccc---
Q 006922 405 SVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALA--- 481 (625)
Q Consensus 405 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~--- 481 (625)
+|.+++..... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++++||+|||+++......
T Consensus 147 ~L~~~l~~~~~----~l~~~~~~~~~~qi~~aL~~LH~~g---iiHrDLKp~NILld~~g~vkL~DFGla~~~~~~~~~~ 219 (412)
T 2vd5_A 147 DLLTLLSKFGE----RIPAEMARFYLAEIVMAIDSVHRLG---YVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVR 219 (412)
T ss_dssp BHHHHHHHHSS----CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCEE
T ss_pred cHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHHCC---eeecccCHHHeeecCCCCEEEeechhheeccCCCccc
Confidence 99999976432 3899999999999999999999998 9999999999999999999999999998764332
Q ss_pred -cccccCCCcCCccccC-------CCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhccccccccc
Q 006922 482 -PVIARAAGYRAPEVTD-------SRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFD 553 (625)
Q Consensus 482 -~~~~~~~~y~aPE~~~-------~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 553 (625)
....||..|+|||++. ...++.++|||||||++|||++|+.||...+..+....+.......
T Consensus 220 ~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~---------- 289 (412)
T 2vd5_A 220 SLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHL---------- 289 (412)
T ss_dssp CSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHC----------
T ss_pred cceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCc----------
Confidence 2347899999999986 4578999999999999999999999997654333322211100000
Q ss_pred ccccCCCC-cHHHHHHHHHHHHHccCCCCCCC---CCHHHHHH
Q 006922 554 VELLRYPN-IEEEMVEMLQIAMSCVVRMPDQR---PKMPDVVR 592 (625)
Q Consensus 554 ~~~~~~~~-~~~~~~~l~~l~~~Cl~~~P~~R---Ps~~ev~~ 592 (625)
..+. ......++.+++.+|+. +|.+| |+++|+++
T Consensus 290 ----~~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~ 327 (412)
T 2vd5_A 290 ----SLPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRT 327 (412)
T ss_dssp ----CCC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred ----CCCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence 0010 01112356677789998 99998 68999875
No 146
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=3.7e-39 Score=331.61 Aligned_cols=236 Identities=20% Similarity=0.243 Sum_probs=185.0
Q ss_pred HhHcccCCceeEEEEEEc-CCcEEEEEEeccccCCh---HHHHHHHHHHHcC-CCCceecceeEEEecCceEEEEEeccC
Q 006922 329 AEVLGKGTFGMAYKAILE-DGTTVVVKRLKDVNVGK---RDFEQQMEIVGSI-RHENVVELKAYYYSKDEKLMVYDYYSL 403 (625)
Q Consensus 329 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~---~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 403 (625)
.+.||+|+||+||+|... +|+.||||++....... ..+..|+..+.++ +||||++++++|.+.+..++||||+ +
T Consensus 62 ~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~e~~-~ 140 (311)
T 3p1a_A 62 LSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELC-G 140 (311)
T ss_dssp EEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC-C
T ss_pred eheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEEecc-C
Confidence 357999999999999965 79999999987654333 3344555555554 8999999999999999999999999 6
Q ss_pred CChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEeccccccccccc--c
Q 006922 404 GSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSAL--A 481 (625)
Q Consensus 404 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~--~ 481 (625)
++|.+++..... .++|..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++..... .
T Consensus 141 ~~L~~~~~~~~~----~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~~~ 213 (311)
T 3p1a_A 141 PSLQQHCEAWGA----SLPEAQVWGYLRDTLLALAHLHSQG---LVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAG 213 (311)
T ss_dssp CBHHHHHHHHCS----CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECGGGCEEECCCTTCEECC-----
T ss_pred CCHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEECCCCCEEEccceeeeecccCCCC
Confidence 689888876532 4999999999999999999999998 999999999999999999999999999876433 2
Q ss_pred cccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccccccccccCCCC
Q 006922 482 PVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPN 561 (625)
Q Consensus 482 ~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 561 (625)
....||.+|+|||++.+ .++.++|||||||++|||++|..|+... +.. . .+.... ..+...
T Consensus 214 ~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~---~~~---~----~~~~~~----~~~~~~---- 274 (311)
T 3p1a_A 214 EVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGG---EGW---Q----QLRQGY----LPPEFT---- 274 (311)
T ss_dssp -CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSH---HHH---H----HHTTTC----CCHHHH----
T ss_pred cccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCc---cHH---H----HHhccC----CCcccc----
Confidence 33458889999999876 7899999999999999999997776432 111 0 011110 011110
Q ss_pred cHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006922 562 IEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR 592 (625)
Q Consensus 562 ~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 592 (625)
.....++.+++.+|++.||++|||+.|+++
T Consensus 275 -~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 275 -AGLSSELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp -TTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred -cCCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 011246778888999999999999999985
No 147
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=3.3e-39 Score=349.82 Aligned_cols=252 Identities=18% Similarity=0.252 Sum_probs=186.3
Q ss_pred hHcccCCceeEEEEEEc-CCcEEEEEEeccccCC---hHHHHHHHHHHHcCCCCceecceeEEEecC------ceEEEEE
Q 006922 330 EVLGKGTFGMAYKAILE-DGTTVVVKRLKDVNVG---KRDFEQQMEIVGSIRHENVVELKAYYYSKD------EKLMVYD 399 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------~~~lv~e 399 (625)
+.||+|+||+||+|... +|+.||||++...... .+.+.+|++++..++||||+++++++...+ ..++|||
T Consensus 68 ~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~E 147 (464)
T 3ttj_A 68 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME 147 (464)
T ss_dssp EEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEEEEEE
T ss_pred EEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCeEEEEEe
Confidence 57999999999999854 6899999999764322 356889999999999999999999997653 5699999
Q ss_pred eccCCChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEecccccccccc
Q 006922 400 YYSLGSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSA 479 (625)
Q Consensus 400 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~ 479 (625)
|++++ +.+.+.. .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 148 ~~~~~-l~~~~~~-------~l~~~~~~~~~~qil~aL~~lH~~~---iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 216 (464)
T 3ttj_A 148 LMDAN-LCQVIQM-------ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 216 (464)
T ss_dssp CCSEE-HHHHHTS-------CCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCCCC-----
T ss_pred CCCCC-HHHHHhh-------cCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChHhEEEeCCCCEEEEEEEeeeecCC
Confidence 99874 5555542 2889999999999999999999998 99999999999999999999999999987654
Q ss_pred c--ccccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHH-H---------------HH
Q 006922 480 L--APVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRW-V---------------HS 541 (625)
Q Consensus 480 ~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~-~---------------~~ 541 (625)
. .....+|..|+|||++.+..|+.++||||+||++|||++|+.||.+.+..+....+.. . ..
T Consensus 217 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~~~ 296 (464)
T 3ttj_A 217 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN 296 (464)
T ss_dssp CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHHHH
T ss_pred CcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhhhh
Confidence 3 2345789999999999999999999999999999999999999976543222111110 0 00
Q ss_pred Hhhcccc------cccccccccCCCC--cHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006922 542 VVREEWT------AEVFDVELLRYPN--IEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR 592 (625)
Q Consensus 542 ~~~~~~~------~~~~d~~~~~~~~--~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 592 (625)
....... ...+......... ......++.+++.+|+..||++|||++|+++
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 355 (464)
T 3ttj_A 297 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 355 (464)
T ss_dssp HHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0000000 0000000000000 0112456788999999999999999999986
No 148
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=1.9e-39 Score=338.04 Aligned_cols=255 Identities=24% Similarity=0.368 Sum_probs=199.4
Q ss_pred HhHcccCCceeEEEEEEcCCcEEEEEEeccccCChHHHHHHHHHHHc--CCCCceecceeEEEecC----ceEEEEEecc
Q 006922 329 AEVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGS--IRHENVVELKAYYYSKD----EKLMVYDYYS 402 (625)
Q Consensus 329 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~--l~h~niv~l~~~~~~~~----~~~lv~e~~~ 402 (625)
.+.||+|+||+||+|.. +|+.||||+++.. ..+.+.+|++++.. ++||||+++++++...+ ..++||||++
T Consensus 47 ~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~--~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~ 123 (342)
T 1b6c_B 47 QESIGKGRFGEVWRGKW-RGEEVAVKIFSSR--EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHE 123 (342)
T ss_dssp EEEEEEETTEEEEEEEE-TTEEEEEEEECGG--GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEEEECCCT
T ss_pred EeeecCCCCcEEEEEEE-cCccEEEEEeCch--hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeEEEEeecC
Confidence 35799999999999987 4899999999753 24567888888887 78999999999998876 7899999999
Q ss_pred CCChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHH--------hcCCCCceecCCCCCCEEeCCCCCeeEeccccc
Q 006922 403 LGSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIH--------AANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLT 474 (625)
Q Consensus 403 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH--------~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla 474 (625)
+|+|.+++... .+++..+..++.|++.||+||| +.+ |+||||||+|||++.++.+||+|||++
T Consensus 124 ~g~L~~~l~~~------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~NIll~~~~~~kL~Dfg~~ 194 (342)
T 1b6c_B 124 HGSLFDYLNRY------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA---IAHRDLKSKNILVKKNGTCCIADLGLA 194 (342)
T ss_dssp TCBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCE---EECSCCSGGGEEECTTSCEEECCCTTC
T ss_pred CCcHHHHHhcc------CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCC---eeeCCCCHHHEEECCCCCEEEEECCCc
Confidence 99999999753 3899999999999999999999 665 999999999999999999999999999
Q ss_pred ccccccc-------cccccCCCcCCccccCCCC------CCCccchhhhHHHHHHHHhC----------CCCCCCCCCcc
Q 006922 475 TITSALA-------PVIARAAGYRAPEVTDSRK------ATQASDVYSFGVVLLEILTG----------KSPIHTTGGDE 531 (625)
Q Consensus 475 ~~~~~~~-------~~~~~~~~y~aPE~~~~~~------~~~~~DvwS~Gvil~elltG----------~~p~~~~~~~~ 531 (625)
+...... ....++..|+|||++.+.. ++.++|||||||++|||+|| +.||......+
T Consensus 195 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~ 274 (342)
T 1b6c_B 195 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD 274 (342)
T ss_dssp EEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSS
T ss_pred eeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCc
Confidence 7664322 2346788899999987652 34689999999999999999 77886543221
Q ss_pred hhhHHHHHHHHhhcccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCC
Q 006922 532 LVHLVRWVHSVVREEWTAEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPND 601 (625)
Q Consensus 532 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~ 601 (625)
.. ...+.. .+.... ..+.........+....+.+++.+||+.||++|||+.||++.|+++..+.
T Consensus 275 ~~-~~~~~~-~~~~~~----~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~~ 338 (342)
T 1b6c_B 275 PS-VEEMRK-VVCEQK----LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 338 (342)
T ss_dssp CC-HHHHHH-HHTTSC----CCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred cc-HHHHHH-HHHHHH----hCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHHh
Confidence 11 111111 111111 11111100012355667889999999999999999999999999987654
No 149
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=5.2e-39 Score=325.66 Aligned_cols=241 Identities=20% Similarity=0.322 Sum_probs=195.9
Q ss_pred hHcccCCceeEEEEEEc-CCcEEEEEEeccccCCh---HHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccCCC
Q 006922 330 EVLGKGTFGMAYKAILE-DGTTVVVKRLKDVNVGK---RDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLGS 405 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~---~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 405 (625)
+.||+|+||+||+|... +|+.||+|++....... +.+.+|++++.+++||||+++++++...+..++||||+++++
T Consensus 12 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~ 91 (284)
T 3kk8_A 12 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGE 91 (284)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred hhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEEecCCCCC
Confidence 56999999999999964 68999999997654332 567899999999999999999999999999999999999999
Q ss_pred hhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCC---eeEecccccccccccc-
Q 006922 406 VSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQY---GCVSDLGLTTITSALA- 481 (625)
Q Consensus 406 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~---~kl~DfGla~~~~~~~- 481 (625)
|.+.+.... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++. +||+|||++.......
T Consensus 92 l~~~~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~ 163 (284)
T 3kk8_A 92 LFEDIVARE-----FYSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA 163 (284)
T ss_dssp HHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSSCB
T ss_pred HHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---cCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccCcc
Confidence 998887643 3899999999999999999999998 999999999999987665 9999999998765432
Q ss_pred -cccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccccccccccCCC
Q 006922 482 -PVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYP 560 (625)
Q Consensus 482 -~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 560 (625)
....++..|+|||.+.+..++.++||||||+++|||++|+.||......+....+ . .... .......
T Consensus 164 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~---~---~~~~-----~~~~~~~- 231 (284)
T 3kk8_A 164 WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI---K---AGAY-----DYPSPEW- 231 (284)
T ss_dssp CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH---H---HTCC-----CCCTTTT-
T ss_pred ccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHH---H---hccc-----cCCchhh-
Confidence 2346788999999999999999999999999999999999999765432222111 1 1110 0000001
Q ss_pred CcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006922 561 NIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR 592 (625)
Q Consensus 561 ~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 592 (625)
.....++.+++.+|++.||++|||+.|+++
T Consensus 232 --~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (284)
T 3kk8_A 232 --DTVTPEAKSLIDSMLTVNPKKRITADQALK 261 (284)
T ss_dssp --TTSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred --cccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 112235677888999999999999999987
No 150
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.3e-39 Score=338.41 Aligned_cols=233 Identities=18% Similarity=0.264 Sum_probs=193.3
Q ss_pred HhHcccCCceeEEEEEE-cCCcEEEEEEeccccC---------ChHHHHHHHHHHHcCCCCceecceeEEEecCceEEEE
Q 006922 329 AEVLGKGTFGMAYKAIL-EDGTTVVVKRLKDVNV---------GKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVY 398 (625)
Q Consensus 329 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~---------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 398 (625)
.+.||+|+||+||+|.. .+++.||||+++.... ..+.+.+|++++.+++||||+++++++.+.+..++||
T Consensus 29 ~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~ 108 (335)
T 3dls_A 29 MSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGFFQLVM 108 (335)
T ss_dssp EEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred EeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCCEEEEEE
Confidence 35799999999999995 5789999999986532 2245788999999999999999999999999999999
Q ss_pred EeccCC-ChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEecccccccc
Q 006922 399 DYYSLG-SVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTIT 477 (625)
Q Consensus 399 e~~~~g-~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~ 477 (625)
||+..| +|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 109 e~~~~g~~l~~~~~~~~-----~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~ 180 (335)
T 3dls_A 109 EKHGSGLDLFAFIDRHP-----RLDEPLASYIFRQLVSAVGYLRLKD---IIHRDIKDENIVIAEDFTIKLIDFGSAAYL 180 (335)
T ss_dssp ECCTTSCBHHHHHHTCC-----CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EeCCCCccHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhCC---eEEeccCHHHEEEcCCCcEEEeecccceEC
Confidence 999877 9999987543 3899999999999999999999998 999999999999999999999999999876
Q ss_pred cccc--cccccCCCcCCccccCCCCC-CCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccccccc
Q 006922 478 SALA--PVIARAAGYRAPEVTDSRKA-TQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDV 554 (625)
Q Consensus 478 ~~~~--~~~~~~~~y~aPE~~~~~~~-~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 554 (625)
.... ....||..|+|||++.+..+ +.++|||||||++|||++|+.||..... . ...
T Consensus 181 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~--~---------------~~~---- 239 (335)
T 3dls_A 181 ERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE--T---------------VEA---- 239 (335)
T ss_dssp CTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG--G---------------TTT----
T ss_pred CCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH--H---------------Hhh----
Confidence 5432 33568899999999988777 7899999999999999999999964211 0 000
Q ss_pred cccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006922 555 ELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRV 593 (625)
Q Consensus 555 ~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 593 (625)
....... ...++.+++..||+.||++|||+.|+++.
T Consensus 240 ~~~~~~~---~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 240 AIHPPYL---VSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp CCCCSSC---CCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred ccCCCcc---cCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0000011 12356778889999999999999999874
No 151
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=3.2e-39 Score=327.03 Aligned_cols=251 Identities=21% Similarity=0.349 Sum_probs=200.1
Q ss_pred HhHcccCCceeEEEEEEc-CCcEEEEEEeccccC-------ChHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEe
Q 006922 329 AEVLGKGTFGMAYKAILE-DGTTVVVKRLKDVNV-------GKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDY 400 (625)
Q Consensus 329 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 400 (625)
.+.||+|+||+||++... +|+.||+|+++.... ..+.+.+|++++.+++||||+++++++...+..++||||
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 89 (283)
T 3bhy_A 10 GEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILEL 89 (283)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred HHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEEEEEee
Confidence 357999999999999965 689999999975422 246789999999999999999999999999999999999
Q ss_pred ccCCChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCC----CeeEeccccccc
Q 006922 401 YSLGSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQ----YGCVSDLGLTTI 476 (625)
Q Consensus 401 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~----~~kl~DfGla~~ 476 (625)
+++++|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++ .+||+|||++..
T Consensus 90 ~~~~~L~~~l~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~ 161 (283)
T 3bhy_A 90 VSGGELFDFLAEKE-----SLTEDEATQFLKQILDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHK 161 (283)
T ss_dssp CCSCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSSSSCCEEECCCTTCEE
T ss_pred cCCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCChHHEEEecCCCCCCceEEEeccccee
Confidence 99999999997543 4899999999999999999999998 99999999999999887 899999999987
Q ss_pred ccccc--cccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccccccc
Q 006922 477 TSALA--PVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDV 554 (625)
Q Consensus 477 ~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 554 (625)
..... ....++..|+|||.+.+..++.++||||||+++|||++|+.||......+....+ ..... ..+.
T Consensus 162 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~------~~~~~---~~~~ 232 (283)
T 3bhy_A 162 IEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNI------SAVNY---DFDE 232 (283)
T ss_dssp CC--------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHH------HTTCC---CCCH
T ss_pred ccCCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHh------Hhccc---CCcc
Confidence 64322 2345788899999999889999999999999999999999999765432221111 00000 0000
Q ss_pred cccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHHhhCCCC
Q 006922 555 ELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR--VIENVRPND 601 (625)
Q Consensus 555 ~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~--~L~~~~~~~ 601 (625)
... + .....+.+++.+|+..||++||++.|+++ .++.++...
T Consensus 233 ~~~--~---~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~~~ 276 (283)
T 3bhy_A 233 EYF--S---NTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRRRN 276 (283)
T ss_dssp HHH--T---TCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHHHCC
T ss_pred hhc--c---cCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHHHHh
Confidence 000 0 11235677888999999999999999997 566665544
No 152
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=2.1e-39 Score=344.66 Aligned_cols=257 Identities=18% Similarity=0.267 Sum_probs=199.3
Q ss_pred HhHcccCCceeEEEEEE-cCCcEEEEEEeccccCChHHHHHHHHHHHcCC--------CCceecceeEEE----ecCceE
Q 006922 329 AEVLGKGTFGMAYKAIL-EDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIR--------HENVVELKAYYY----SKDEKL 395 (625)
Q Consensus 329 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~--------h~niv~l~~~~~----~~~~~~ 395 (625)
.+.||+|+||+||+|+. .+++.||||+++......+.+.+|++++.+++ |+||+++++++. .....+
T Consensus 42 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~~ 121 (397)
T 1wak_A 42 IRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHIC 121 (397)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEETTEEEEE
T ss_pred EEEeeecCCeeEEEEEecCCCeEEEEEEEecCCcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCCCCceEE
Confidence 35799999999999985 46899999999865444567889999999885 788999999987 455789
Q ss_pred EEEEeccCCChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhc-CCCCceecCCCCCCEEeCCCC----------
Q 006922 396 MVYDYYSLGSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAA-NGGKLVHGNIKSSNIFLNSQQ---------- 464 (625)
Q Consensus 396 lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~-~~~~ivHrDlk~~NIll~~~~---------- 464 (625)
+||||+ ++++.+.+.... ...+++..+..++.|++.||+|||++ + |+||||||+|||++.++
T Consensus 122 lv~e~~-~~~l~~~~~~~~---~~~~~~~~~~~i~~qi~~aL~~lH~~~g---ivHrDikp~NIll~~~~~~~~~~~~~~ 194 (397)
T 1wak_A 122 MVFEVL-GHHLLKWIIKSN---YQGLPLPCVKKIIQQVLQGLDYLHTKCR---IIHTDIKPENILLSVNEQYIRRLAAEA 194 (397)
T ss_dssp EEECCC-CCBHHHHHHHTT---TSCCCHHHHHHHHHHHHHHHHHHHHTTC---EECCCCSGGGEEECCCHHHHHHHHHHH
T ss_pred EEEecc-CccHHHHHHhcc---cCCCCHHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHeeEeccchhhhhhhhhh
Confidence 999999 556666655432 12489999999999999999999998 7 99999999999999775
Q ss_pred ---------------------------------------CeeEecccccccccccccccccCCCcCCccccCCCCCCCcc
Q 006922 465 ---------------------------------------YGCVSDLGLTTITSALAPVIARAAGYRAPEVTDSRKATQAS 505 (625)
Q Consensus 465 ---------------------------------------~~kl~DfGla~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~ 505 (625)
.+||+|||+++..........+|..|+|||++.+..++.++
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~ 274 (397)
T 1wak_A 195 TEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPA 274 (397)
T ss_dssp C---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSCSCCSCGGGCCHHHHHTSCCCTHH
T ss_pred HHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccCccCCCCCcccCChhhcCCCCCcHH
Confidence 79999999998876655566789999999999999999999
Q ss_pred chhhhHHHHHHHHhCCCCCCCCCCcchhhHHHH---HHHHhhc---------cccccccccc------------------
Q 006922 506 DVYSFGVVLLEILTGKSPIHTTGGDELVHLVRW---VHSVVRE---------EWTAEVFDVE------------------ 555 (625)
Q Consensus 506 DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~---~~~~~~~---------~~~~~~~d~~------------------ 555 (625)
|||||||++|||+||+.||......+....... +...... ....+.+...
T Consensus 275 DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (397)
T 1wak_A 275 DIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVL 354 (397)
T ss_dssp HHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHHHH
T ss_pred HHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcchhHhh
Confidence 999999999999999999987654432221111 1111110 0111111100
Q ss_pred ccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006922 556 LLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR 592 (625)
Q Consensus 556 ~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 592 (625)
........+....+.+++.+||+.||++|||+.|+++
T Consensus 355 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 355 VEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp HHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred hhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 0011224556678899999999999999999999985
No 153
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.1e-39 Score=341.24 Aligned_cols=257 Identities=20% Similarity=0.309 Sum_probs=191.3
Q ss_pred hHcccCCceeEEEEEE-cCCcEEEEEEeccccCC---hHHHHHHHHHHHcCCCCceecceeEEEecC------ceEEEEE
Q 006922 330 EVLGKGTFGMAYKAIL-EDGTTVVVKRLKDVNVG---KRDFEQQMEIVGSIRHENVVELKAYYYSKD------EKLMVYD 399 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------~~~lv~e 399 (625)
+.||+|+||+||+|.. .+|+.||||++...... .+.+.+|++++..++||||+++++++...+ ..++|||
T Consensus 31 ~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~e 110 (367)
T 1cm8_A 31 QPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMP 110 (367)
T ss_dssp EEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCEEEEE
T ss_pred EEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCceEEEEEe
Confidence 5699999999999996 46999999999654332 356789999999999999999999997753 4599999
Q ss_pred eccCCChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEecccccccccc
Q 006922 400 YYSLGSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSA 479 (625)
Q Consensus 400 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~ 479 (625)
|+ +++|.+++... .+++..+..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 111 ~~-~~~L~~~~~~~------~l~~~~~~~~~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 180 (367)
T 1cm8_A 111 FM-GTDLGKLMKHE------KLGEDRIQFLVYQMLKGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLARQADS 180 (367)
T ss_dssp CC-SEEHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEECCS
T ss_pred cC-CCCHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCcCHHHEEEcCCCCEEEEeeeccccccc
Confidence 99 78999998753 3899999999999999999999998 99999999999999999999999999998766
Q ss_pred cccccccCCCcCCccccCC-CCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhccccccc-------
Q 006922 480 LAPVIARAAGYRAPEVTDS-RKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEV------- 551 (625)
Q Consensus 480 ~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 551 (625)
......+|..|+|||++.+ ..++.++||||+||++|||++|+.||.+.+..+....+.........+....+
T Consensus 181 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~ 260 (367)
T 1cm8_A 181 EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKN 260 (367)
T ss_dssp SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHH
T ss_pred ccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhHHHHH
Confidence 5556678899999999876 68999999999999999999999999765432222111100000000000000
Q ss_pred --------ccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHHhhC
Q 006922 552 --------FDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR--VIENVR 598 (625)
Q Consensus 552 --------~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~--~L~~~~ 598 (625)
....... .......++.+++.+|+..||.+|||+.|+++ .++.+.
T Consensus 261 ~~~~~~~~~~~~~~~--~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~~~ 315 (367)
T 1cm8_A 261 YMKGLPELEKKDFAS--ILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLH 315 (367)
T ss_dssp HHHHSCCCCCCCGGG--TCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred HHHhCCCCCCCCHHH--HCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChHHHhhc
Confidence 0000000 00112235677888999999999999999987 344443
No 154
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.7e-39 Score=338.82 Aligned_cols=254 Identities=17% Similarity=0.223 Sum_probs=195.1
Q ss_pred HhHcccCCceeEEEEEE-cCCcEEEEEEecccc------CChHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEec
Q 006922 329 AEVLGKGTFGMAYKAIL-EDGTTVVVKRLKDVN------VGKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYY 401 (625)
Q Consensus 329 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 401 (625)
.+.||+|+||+||+|.. .++..||+|++.... ...+.+.+|++++.+++||||+++++++.+.+..++||||+
T Consensus 31 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 110 (345)
T 3hko_A 31 KGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELC 110 (345)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred cceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEEEEEeCC
Confidence 46799999999999996 468899999997531 22367899999999999999999999999999999999999
Q ss_pred cCCChhhhhccccCC-----------------------------------CCccCCHHHHHHHHHHHHHHHHHHHhcCCC
Q 006922 402 SLGSVSAMLHSERGE-----------------------------------GRIPLDWDTRMRIAIGAARGIARIHAANGG 446 (625)
Q Consensus 402 ~~g~L~~~l~~~~~~-----------------------------------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~ 446 (625)
++|+|.+++...... ....+++..+..++.|++.||+|||+.+
T Consensus 111 ~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~-- 188 (345)
T 3hko_A 111 HGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQG-- 188 (345)
T ss_dssp CSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHHHTT--
T ss_pred CCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCC--
Confidence 999999998632111 0112457778899999999999999998
Q ss_pred CceecCCCCCCEEeCCCC--CeeEeccccccccccc-------ccccccCCCcCCccccCC--CCCCCccchhhhHHHHH
Q 006922 447 KLVHGNIKSSNIFLNSQQ--YGCVSDLGLTTITSAL-------APVIARAAGYRAPEVTDS--RKATQASDVYSFGVVLL 515 (625)
Q Consensus 447 ~ivHrDlk~~NIll~~~~--~~kl~DfGla~~~~~~-------~~~~~~~~~y~aPE~~~~--~~~~~~~DvwS~Gvil~ 515 (625)
|+||||||+||+++.++ .+||+|||+++..... .....++..|+|||.+.+ ..++.++|||||||++|
T Consensus 189 -ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~ 267 (345)
T 3hko_A 189 -ICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLH 267 (345)
T ss_dssp -EECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHHHH
T ss_pred -ccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHHHHHHH
Confidence 99999999999998776 8999999999865321 123467888999999865 67899999999999999
Q ss_pred HHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--H
Q 006922 516 EILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR--V 593 (625)
Q Consensus 516 elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~--~ 593 (625)
||++|+.||......+... ........ ... +.......++.+++.+|++.+|.+||++.|+++ .
T Consensus 268 el~~g~~pf~~~~~~~~~~------~~~~~~~~--~~~------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~hp~ 333 (345)
T 3hko_A 268 LLLMGAVPFPGVNDADTIS------QVLNKKLC--FEN------PNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPW 333 (345)
T ss_dssp HHHHSSCSSCCSSHHHHHH------HHHHCCCC--TTS------GGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHHSHH
T ss_pred HHHHCCCCCCCCChHHHHH------HHHhcccc--cCC------cccccCCHHHHHHHHHHcCCChhHCCCHHHHhcChh
Confidence 9999999997654322211 11111100 000 111112245677888999999999999999987 4
Q ss_pred HHhhCC
Q 006922 594 IENVRP 599 (625)
Q Consensus 594 L~~~~~ 599 (625)
++++..
T Consensus 334 ~~~~~~ 339 (345)
T 3hko_A 334 ISQFSD 339 (345)
T ss_dssp HHTTSS
T ss_pred hccChH
Confidence 555443
No 155
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=6.6e-39 Score=323.77 Aligned_cols=241 Identities=17% Similarity=0.265 Sum_probs=195.3
Q ss_pred HhHcccCCceeEEEEEEc-CCcEEEEEEecccc-CChHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccCCCh
Q 006922 329 AEVLGKGTFGMAYKAILE-DGTTVVVKRLKDVN-VGKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLGSV 406 (625)
Q Consensus 329 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 406 (625)
.+.||+|+||+||+|... ++..||+|++.... ...+.+.+|++++.+++||||+++++++.+.+..++||||+++++|
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 93 (277)
T 3f3z_A 14 ENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGEL 93 (277)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCCSCBH
T ss_pred eeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEeccCCCcH
Confidence 357999999999999965 57899999997653 3457899999999999999999999999999999999999999999
Q ss_pred hhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEe---CCCCCeeEeccccccccccc--c
Q 006922 407 SAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFL---NSQQYGCVSDLGLTTITSAL--A 481 (625)
Q Consensus 407 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll---~~~~~~kl~DfGla~~~~~~--~ 481 (625)
.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+||++ +.++.+||+|||++...... .
T Consensus 94 ~~~~~~~~-----~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~~~ 165 (277)
T 3f3z_A 94 FERVVHKR-----VFRESDAARIMKDVLSAVAYCHKLN---VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMM 165 (277)
T ss_dssp HHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTSCB
T ss_pred HHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHEEEecCCCCCcEEEEecccceeccCccch
Confidence 99887643 3899999999999999999999998 9999999999999 78899999999999876432 2
Q ss_pred cccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccccccccccCCCC
Q 006922 482 PVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPN 561 (625)
Q Consensus 482 ~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 561 (625)
....++..|+|||.+.+. ++.++||||||+++|||++|+.||......+....+ . .... . ...... .
T Consensus 166 ~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~---~---~~~~-~-~~~~~~---~- 232 (277)
T 3f3z_A 166 RTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKI---R---EGTF-T-FPEKDW---L- 232 (277)
T ss_dssp CCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH---H---HCCC-C-CCHHHH---T-
T ss_pred hccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHH---H---hCCC-C-CCchhh---h-
Confidence 334688899999998764 899999999999999999999999765432222111 1 1100 0 000000 0
Q ss_pred cHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006922 562 IEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR 592 (625)
Q Consensus 562 ~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 592 (625)
....++.+++.+|++.||++|||+.|+++
T Consensus 233 --~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 233 --NVSPQAESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp --TSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred --cCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 11346778888999999999999999985
No 156
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.3e-39 Score=329.23 Aligned_cols=238 Identities=22% Similarity=0.375 Sum_probs=176.1
Q ss_pred hHcccCCceeEEEEEE-cCCcEEEEEEecccc----CChHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccCC
Q 006922 330 EVLGKGTFGMAYKAIL-EDGTTVVVKRLKDVN----VGKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLG 404 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 404 (625)
+.||+|+||+||+|.. .+|+.||+|++.... ...+.+.+|++++.+++||||+++++++.+.+..++||||++++
T Consensus 17 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 96 (278)
T 3cok_A 17 NLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNG 96 (278)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEEECCTTE
T ss_pred eeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEEecCCCC
Confidence 5699999999999996 579999999997532 12367889999999999999999999999999999999999999
Q ss_pred ChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEeccccccccccc---c
Q 006922 405 SVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSAL---A 481 (625)
Q Consensus 405 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~---~ 481 (625)
+|.+++.... ..+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||++...... .
T Consensus 97 ~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~ 169 (278)
T 3cok_A 97 EMNRYLKNRV----KPFSENEARHFMHQIITGMLYLHSHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKH 169 (278)
T ss_dssp EHHHHHHTCS----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECSSCCGGGEEECTTCCEEECCCTTCEECC------
T ss_pred cHHHHHhhcc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEEEeecceeeccCCCCcc
Confidence 9999997542 24899999999999999999999998 999999999999999999999999999876422 2
Q ss_pred cccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccccccccccCCCC
Q 006922 482 PVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPN 561 (625)
Q Consensus 482 ~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 561 (625)
....++..|+|||.+.+..++.++||||||+++|||++|+.||......+... .... . +... +
T Consensus 170 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~------~~~~----~---~~~~---~- 232 (278)
T 3cok_A 170 YTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLN------KVVL----A---DYEM---P- 232 (278)
T ss_dssp ----------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----------CCS----S---CCCC---C-
T ss_pred eeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHH------HHhh----c---ccCC---c-
Confidence 23467888999999998899999999999999999999999997654332211 0000 0 0011 1
Q ss_pred cHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006922 562 IEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR 592 (625)
Q Consensus 562 ~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 592 (625)
.....++.+++.+|++.||++|||+.|+++
T Consensus 233 -~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 233 -SFLSIEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp -TTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred -cccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 112235677888999999999999999976
No 157
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=5.7e-39 Score=331.69 Aligned_cols=242 Identities=20% Similarity=0.317 Sum_probs=197.1
Q ss_pred HhHcccCCceeEEEEEEc-CCcEEEEEEeccccC-------ChHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEe
Q 006922 329 AEVLGKGTFGMAYKAILE-DGTTVVVKRLKDVNV-------GKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDY 400 (625)
Q Consensus 329 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 400 (625)
.+.||+|+||+||+|... +|+.||+|+++.... ..+.+.+|++++.+++||||+++++++...+..++||||
T Consensus 17 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 96 (321)
T 2a2a_A 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILEL 96 (321)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred eeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEEEEc
Confidence 467999999999999965 689999999976432 246789999999999999999999999999999999999
Q ss_pred ccCCChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCC----CeeEeccccccc
Q 006922 401 YSLGSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQ----YGCVSDLGLTTI 476 (625)
Q Consensus 401 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~----~~kl~DfGla~~ 476 (625)
+++++|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++ .+||+|||+++.
T Consensus 97 ~~~~~L~~~l~~~~-----~~~~~~~~~i~~qi~~aL~~lH~~~---ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~ 168 (321)
T 2a2a_A 97 VSGGELFDFLAQKE-----SLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE 168 (321)
T ss_dssp CCSCBHHHHHHTCS-----CEEHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCTTSSSCCEEECCCTTCEE
T ss_pred CCCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCChHHEEEecCCCCcCCEEEccCcccee
Confidence 99999999997532 4899999999999999999999998 99999999999999888 799999999987
Q ss_pred ccccc--cccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccccccc
Q 006922 477 TSALA--PVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDV 554 (625)
Q Consensus 477 ~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 554 (625)
..... ....++..|+|||.+.+..++.++||||||+++|||++|+.||......+....+ .... ..++.
T Consensus 169 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i------~~~~---~~~~~ 239 (321)
T 2a2a_A 169 IEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANI------TSVS---YDFDE 239 (321)
T ss_dssp CCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHH------HTTC---CCCCH
T ss_pred cCccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHH------Hhcc---cccCh
Confidence 65432 3346888999999999999999999999999999999999999764432222111 1100 00011
Q ss_pred cccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006922 555 ELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR 592 (625)
Q Consensus 555 ~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 592 (625)
... + .....+.+++.+|+..||++|||+.|+++
T Consensus 240 ~~~--~---~~~~~~~~li~~~l~~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 240 EFF--S---HTSELAKDFIRKLLVKETRKRLTIQEALR 272 (321)
T ss_dssp HHH--T---TCCHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred hhh--c---ccCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 000 0 11235677888999999999999999986
No 158
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=2.1e-39 Score=329.09 Aligned_cols=244 Identities=22% Similarity=0.318 Sum_probs=191.3
Q ss_pred HhHcccCCceeEEEEEE-cCCcEEEEEEecccc--CChHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccCCC
Q 006922 329 AEVLGKGTFGMAYKAIL-EDGTTVVVKRLKDVN--VGKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLGS 405 (625)
Q Consensus 329 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 405 (625)
.+.||+|+||+||++.. .++..||+|++.... ...+.+.+|++++.+++||||+++++++.+.+..++||||+++|+
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~ 106 (285)
T 3is5_A 27 KRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGE 106 (285)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCSCCB
T ss_pred cceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEeCCCCc
Confidence 46799999999999996 468999999997653 335789999999999999999999999999999999999999999
Q ss_pred hhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEe---CCCCCeeEeccccccccccc--
Q 006922 406 VSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFL---NSQQYGCVSDLGLTTITSAL-- 480 (625)
Q Consensus 406 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll---~~~~~~kl~DfGla~~~~~~-- 480 (625)
|.+++..... ....+++..+..++.|++.||+|||+.+ |+||||||+||++ +.++.+||+|||+++.....
T Consensus 107 L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~~~ 182 (285)
T 3is5_A 107 LLERIVSAQA-RGKALSEGYVAELMKQMMNALAYFHSQH---VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEH 182 (285)
T ss_dssp HHHHHHHHHH-HTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEESSSSTTCCEEECCCCCCCC------
T ss_pred HHHHHHhhhh-cccCCCHHHHHHHHHHHHHHHHHHHhCC---EEECCCCHHHEEEecCCCCCCEEEEeeecceecCCccc
Confidence 9998865421 1134899999999999999999999998 9999999999999 45678999999999865432
Q ss_pred ccccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccccccccccCCC
Q 006922 481 APVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYP 560 (625)
Q Consensus 481 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 560 (625)
.....++..|+|||.+. ..++.++||||||+++|||++|+.||......+...... ..... .. ....+
T Consensus 183 ~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~------~~~~~---~~--~~~~~ 250 (285)
T 3is5_A 183 STNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKAT------YKEPN---YA--VECRP 250 (285)
T ss_dssp ----CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH------HCCCC---CC--C--CC
T ss_pred CcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhc------cCCcc---cc--cccCc
Confidence 23446788899999986 468899999999999999999999997654332221111 01000 00 00001
Q ss_pred CcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006922 561 NIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR 592 (625)
Q Consensus 561 ~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 592 (625)
...++.+++.+|++.||++|||+.|+++
T Consensus 251 ----~~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 251 ----LTPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp ----CCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred ----CCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1235667888999999999999999975
No 159
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.3e-39 Score=337.91 Aligned_cols=239 Identities=17% Similarity=0.335 Sum_probs=188.2
Q ss_pred hHcccCCceeEEEEEEcCCcEEEEEEeccccCCh---HHHHHHHHHHHcCCC--CceecceeEEEecCceEEEEEeccCC
Q 006922 330 EVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGK---RDFEQQMEIVGSIRH--ENVVELKAYYYSKDEKLMVYDYYSLG 404 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~---~~~~~e~~~l~~l~h--~niv~l~~~~~~~~~~~lv~e~~~~g 404 (625)
+.||+|+||+||++...+++.||||++....... +.+.+|++++.+++| |||+++++++...+..++||| +.++
T Consensus 15 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e-~~~~ 93 (343)
T 3dbq_A 15 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNI 93 (343)
T ss_dssp EEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEC-CCSE
T ss_pred EEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEEe-CCCC
Confidence 5799999999999998889999999997654332 568899999999976 999999999999999999999 5678
Q ss_pred ChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEecccccccccccc---
Q 006922 405 SVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALA--- 481 (625)
Q Consensus 405 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~--- 481 (625)
+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+|||++ ++.+||+|||+++......
T Consensus 94 ~L~~~l~~~~-----~~~~~~~~~i~~qi~~al~~lH~~~---iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~~~ 164 (343)
T 3dbq_A 94 DLNSWLKKKK-----SIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSV 164 (343)
T ss_dssp EHHHHHHHSC-----CCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEE-TTEEEECCCSSSCCC-------
T ss_pred CHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCcceEEEE-CCcEEEeecccccccCcccccc
Confidence 9999998643 4899999999999999999999998 99999999999997 6789999999998764322
Q ss_pred --cccccCCCcCCccccCC-----------CCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccc
Q 006922 482 --PVIARAAGYRAPEVTDS-----------RKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWT 548 (625)
Q Consensus 482 --~~~~~~~~y~aPE~~~~-----------~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 548 (625)
....||..|+|||++.+ ..++.++|||||||++|||++|+.||...... .............
T Consensus 165 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-----~~~~~~~~~~~~~ 239 (343)
T 3dbq_A 165 VKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ-----ISKLHAIIDPNHE 239 (343)
T ss_dssp -----CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSH-----HHHHHHHHCTTSC
T ss_pred cCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhH-----HHHHHHHhcCCcc
Confidence 23468999999999854 67889999999999999999999999753321 1111111111110
Q ss_pred cccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006922 549 AEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRV 593 (625)
Q Consensus 549 ~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 593 (625)
. ..+ .....++.+++..||+.||.+|||+.|+++.
T Consensus 240 ~--------~~~--~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h 274 (343)
T 3dbq_A 240 I--------EFP--DIPEKDLQDVLKCCLKRDPKQRISIPELLAH 274 (343)
T ss_dssp C--------CCC--CCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred c--------CCc--ccCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence 0 001 1112356778889999999999999999863
No 160
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=4.3e-39 Score=353.60 Aligned_cols=242 Identities=23% Similarity=0.305 Sum_probs=197.3
Q ss_pred hHcccCCceeEEEEEEc-CCcEEEEEEecccc----CChHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccCC
Q 006922 330 EVLGKGTFGMAYKAILE-DGTTVVVKRLKDVN----VGKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLG 404 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 404 (625)
++||+|+||+||+|... +|+.||+|++.... .....+.+|++++.+++|||||++++++.+.+..++||||+++|
T Consensus 190 ~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmEy~~gg 269 (576)
T 2acx_A 190 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGG 269 (576)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEEEEcCCCC
Confidence 56999999999999965 69999999997532 23456889999999999999999999999999999999999999
Q ss_pred ChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEeccccccccccc--cc
Q 006922 405 SVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSAL--AP 482 (625)
Q Consensus 405 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~--~~ 482 (625)
+|.+++.... ...+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++..... ..
T Consensus 270 ~L~~~l~~~~---~~~l~e~~~~~i~~qIl~aL~yLH~~g---IvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~~~~ 343 (576)
T 2acx_A 270 DLKFHIYHMG---QAGFPEARAVFYAAEICCGLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIK 343 (576)
T ss_dssp BHHHHHHSSS---SCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCTTCEECCTTCCEE
T ss_pred cHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHHCC---EeccCCchheEEEeCCCCeEEEecccceecccCcccc
Confidence 9999987543 224899999999999999999999998 999999999999999999999999999876533 23
Q ss_pred ccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhh-HHHHHHHHhhcccccccccccccCCCC
Q 006922 483 VIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVH-LVRWVHSVVREEWTAEVFDVELLRYPN 561 (625)
Q Consensus 483 ~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~d~~~~~~~~ 561 (625)
...||..|+|||++.+..++.++|||||||++|||++|+.||.......... ....+. ... . ..+
T Consensus 344 ~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~----~~~-~--------~~p- 409 (576)
T 2acx_A 344 GRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVK----EVP-E--------EYS- 409 (576)
T ss_dssp CCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHH----HCC-C--------CCC-
T ss_pred ccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhh----ccc-c--------cCC-
Confidence 4578999999999999899999999999999999999999998754322211 111111 110 0 000
Q ss_pred cHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 006922 562 IEEEMVEMLQIAMSCVVRMPDQRP-----KMPDVVR 592 (625)
Q Consensus 562 ~~~~~~~l~~l~~~Cl~~~P~~RP-----s~~ev~~ 592 (625)
.....++.+++.+|+..||.+|| +++|+++
T Consensus 410 -~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~ 444 (576)
T 2acx_A 410 -ERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKE 444 (576)
T ss_dssp -TTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred -ccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence 11123567778899999999999 6788864
No 161
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=8.5e-39 Score=329.39 Aligned_cols=248 Identities=20% Similarity=0.270 Sum_probs=190.2
Q ss_pred hHcccCCceeEEEEEE-cCCcEEEEEEeccccC-ChHHHHHHHHHHHcC-CCCceecceeEEEecCceEEEEEeccCCCh
Q 006922 330 EVLGKGTFGMAYKAIL-EDGTTVVVKRLKDVNV-GKRDFEQQMEIVGSI-RHENVVELKAYYYSKDEKLMVYDYYSLGSV 406 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 406 (625)
+.||+|+||+||+|.. .+++.||||+++.... ..+.+.+|++++.++ +||||+++++++.+.+..++||||+++|+|
T Consensus 19 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 98 (316)
T 2ac3_A 19 DVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSI 98 (316)
T ss_dssp CCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTCBH
T ss_pred ceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEcCCCCcH
Confidence 4699999999999994 4799999999976533 356789999999885 799999999999999999999999999999
Q ss_pred hhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCC---eeEeccccccccccc---
Q 006922 407 SAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQY---GCVSDLGLTTITSAL--- 480 (625)
Q Consensus 407 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~---~kl~DfGla~~~~~~--- 480 (625)
.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++. +||+|||+++.....
T Consensus 99 ~~~l~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~ 170 (316)
T 2ac3_A 99 LSHIHKRR-----HFNELEASVVVQDVASALDFLHNKG---IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDC 170 (316)
T ss_dssp HHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEESCSSSSCSEEECCTTCCC--------
T ss_pred HHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHhCC---ceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCcc
Confidence 99997653 4899999999999999999999998 999999999999998876 999999998765321
Q ss_pred -------ccccccCCCcCCccccCC-----CCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchh--------hHHHHHH
Q 006922 481 -------APVIARAAGYRAPEVTDS-----RKATQASDVYSFGVVLLEILTGKSPIHTTGGDELV--------HLVRWVH 540 (625)
Q Consensus 481 -------~~~~~~~~~y~aPE~~~~-----~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~--------~~~~~~~ 540 (625)
.....+|..|+|||++.. ..++.++|||||||++|||++|+.||......+.. .....+.
T Consensus 171 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 250 (316)
T 2ac3_A 171 SPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLF 250 (316)
T ss_dssp -----------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHH
T ss_pred ccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHH
Confidence 112347888999999864 45789999999999999999999999765432200 0000011
Q ss_pred HHhhcccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006922 541 SVVREEWTAEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR 592 (625)
Q Consensus 541 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 592 (625)
..+..... ..-+... .....++.+++.+|++.||++|||+.|+++
T Consensus 251 ~~i~~~~~-~~~~~~~------~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 295 (316)
T 2ac3_A 251 ESIQEGKY-EFPDKDW------AHISCAAKDLISKLLVRDAKQRLSAAQVLQ 295 (316)
T ss_dssp HHHHHCCC-CCCHHHH------TTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHhccCc-ccCchhc------ccCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 11111100 0000000 011245778888999999999999999987
No 162
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=3.7e-39 Score=334.82 Aligned_cols=256 Identities=19% Similarity=0.308 Sum_probs=201.4
Q ss_pred hHcccCCceeEEEEEE--cCCcEEEEEEeccccCChHHHHHHHHHHHcCCCCc------eecceeEEEecCceEEEEEec
Q 006922 330 EVLGKGTFGMAYKAIL--EDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHEN------VVELKAYYYSKDEKLMVYDYY 401 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~--~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~n------iv~l~~~~~~~~~~~lv~e~~ 401 (625)
+.||+|+||+||+|.. .+++.||||+++......+.+.+|++++..++|++ ++++++++...+..++||||+
T Consensus 20 ~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 99 (339)
T 1z57_A 20 DTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELL 99 (339)
T ss_dssp EEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEEEEEEECC
T ss_pred EEEecCCCeEEEEEEecCCCCcEEEEEEEecCCchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcEEEEEcCC
Confidence 5699999999999985 36899999999865444567889999999887664 999999999999999999999
Q ss_pred cCCChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCC-------------------
Q 006922 402 SLGSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNS------------------- 462 (625)
Q Consensus 402 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~------------------- 462 (625)
+++|.+++.... ..++++..+..++.|+++||+|||+.+ |+||||||+|||++.
T Consensus 100 -~~~l~~~l~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~ 172 (339)
T 1z57_A 100 -GLSTYDFIKENG---FLPFRLDHIRKMAYQICKSVNFLHSNK---LTHTDLKPENILFVQSDYTEAYNPKIKRDERTLI 172 (339)
T ss_dssp -CCBHHHHHHHTT---TCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESCCCEEEEEC----CEEEEES
T ss_pred -CCCHHHHHHhcC---CCCCcHHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHEEEeccccccccCCcccccccccc
Confidence 889999987643 235889999999999999999999998 999999999999987
Q ss_pred CCCeeEecccccccccccccccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHH
Q 006922 463 QQYGCVSDLGLTTITSALAPVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSV 542 (625)
Q Consensus 463 ~~~~kl~DfGla~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~ 542 (625)
++.+||+|||+++..........+|..|+|||++.+..++.++|||||||++|||++|+.||......+....+......
T Consensus 173 ~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~ 252 (339)
T 1z57_A 173 NPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGP 252 (339)
T ss_dssp CCCEEECCCSSCEETTSCCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHHHHHHHCS
T ss_pred CCCceEeeCcccccCccccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCC
Confidence 66899999999988766556667899999999999999999999999999999999999999875544333322221110
Q ss_pred hhccc-----cccccccc---------------------ccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006922 543 VREEW-----TAEVFDVE---------------------LLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR 592 (625)
Q Consensus 543 ~~~~~-----~~~~~d~~---------------------~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 592 (625)
..... ....+... ............++.+++.+||+.||.+|||+.|+++
T Consensus 253 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 328 (339)
T 1z57_A 253 LPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALK 328 (339)
T ss_dssp CCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred CCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhc
Confidence 00000 00000000 0001112234567889999999999999999999985
No 163
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=3.8e-39 Score=331.17 Aligned_cols=256 Identities=21% Similarity=0.357 Sum_probs=193.5
Q ss_pred HhHcccCCceeEEEEEE-cCCcEEEEEEeccccC----ChHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccC
Q 006922 329 AEVLGKGTFGMAYKAIL-EDGTTVVVKRLKDVNV----GKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSL 403 (625)
Q Consensus 329 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~----~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 403 (625)
.+.||+|+||.||+|.. .+|+.||+|+++.... ..+.+.+|++++.+++||||+++++++...+..++||||+++
T Consensus 37 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 116 (310)
T 2wqm_A 37 EKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADA 116 (310)
T ss_dssp EEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCCS
T ss_pred EEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEEecCCC
Confidence 35799999999999995 5799999999975322 235688999999999999999999999999999999999999
Q ss_pred CChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEecccccccccccc--
Q 006922 404 GSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALA-- 481 (625)
Q Consensus 404 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~-- 481 (625)
++|.+++..... ....+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 117 ~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~ 192 (310)
T 2wqm_A 117 GDLSRMIKHFKK-QKRLIPERTVWKYFVQLCSALEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTA 192 (310)
T ss_dssp CBHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCC------------
T ss_pred CCHHHHHHHhcc-cccCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCcHHHEEEcCCCCEEEEeccceeeecCCCcc
Confidence 999999875321 1234899999999999999999999998 9999999999999999999999999998764322
Q ss_pred -cccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccccccccccCCC
Q 006922 482 -PVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYP 560 (625)
Q Consensus 482 -~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 560 (625)
....++..|+|||.+.+..++.++||||||+++|||++|+.||...... .......+ .... ... ..
T Consensus 193 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-~~~~~~~~---~~~~-~~~-----~~--- 259 (310)
T 2wqm_A 193 AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN-LYSLCKKI---EQCD-YPP-----LP--- 259 (310)
T ss_dssp ------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CC-HHHHHHHH---HTTC-SCC-----CC---
T ss_pred ccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchh-HHHHHHHh---hccc-CCC-----Cc---
Confidence 2345788899999999999999999999999999999999999754322 11111111 1111 000 00
Q ss_pred CcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCCC
Q 006922 561 NIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPNDS 602 (625)
Q Consensus 561 ~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~~ 602 (625)
......++.+++.+||..||.+|||+.|+++.|+++.....
T Consensus 260 -~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~ 300 (310)
T 2wqm_A 260 -SDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTA 300 (310)
T ss_dssp -TTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred -ccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhh
Confidence 01122357778889999999999999999999999976543
No 164
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=6.8e-39 Score=329.29 Aligned_cols=252 Identities=18% Similarity=0.278 Sum_probs=192.5
Q ss_pred hHcccCCceeEEEEEEc-CCcEEEEEEeccccCC----hHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccCC
Q 006922 330 EVLGKGTFGMAYKAILE-DGTTVVVKRLKDVNVG----KRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLG 404 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~----~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 404 (625)
+.||+|+||+||+|... +++.||+|++...... .+.+.+|++++.+++||||+++++++...+..++||||++++
T Consensus 40 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~ 119 (309)
T 2h34_A 40 RLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVDMRLINGV 119 (309)
T ss_dssp EEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCCCE
T ss_pred EEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEEEEecCCC
Confidence 56999999999999964 6899999999765322 256889999999999999999999999999999999999999
Q ss_pred ChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEecccccccccccc---
Q 006922 405 SVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALA--- 481 (625)
Q Consensus 405 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~--- 481 (625)
+|.+++.... .+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 120 ~L~~~l~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~ 191 (309)
T 2h34_A 120 DLAAMLRRQG-----PLAPPRAVAIVRQIGSALDAAHAAG---ATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQ 191 (309)
T ss_dssp EHHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECSCCC-----------
T ss_pred CHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCc---CCcCCCChHHEEEcCCCCEEEecCccCcccccccccc
Confidence 9999998643 4899999999999999999999998 9999999999999999999999999997664321
Q ss_pred -cccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccccccccccCCC
Q 006922 482 -PVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYP 560 (625)
Q Consensus 482 -~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 560 (625)
....++..|+|||.+.+..++.++||||||+++|||++|+.||...... .. ...+..... .... ..+
T Consensus 192 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~---~~----~~~~~~~~~----~~~~-~~~ 259 (309)
T 2h34_A 192 LGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS---VM----GAHINQAIP----RPST-VRP 259 (309)
T ss_dssp -----CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH---HH----HHHHHSCCC----CGGG-TST
T ss_pred ccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH---HH----HHHhccCCC----Cccc-cCC
Confidence 2345788899999999999999999999999999999999999753221 11 111111110 0000 001
Q ss_pred CcHHHHHHHHHHHHHccCCCCCCCC-CHHHHHHHHHhhCCCCCCC
Q 006922 561 NIEEEMVEMLQIAMSCVVRMPDQRP-KMPDVVRVIENVRPNDSEN 604 (625)
Q Consensus 561 ~~~~~~~~l~~l~~~Cl~~~P~~RP-s~~ev~~~L~~~~~~~~~~ 604 (625)
. ...++.+++.+||+.||++|| +++++++.|+.........
T Consensus 260 ~---~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~~~~ 301 (309)
T 2h34_A 260 G---IPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATADQD 301 (309)
T ss_dssp T---CCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC-----
T ss_pred C---CCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhhccc
Confidence 1 123566788899999999999 9999999999887766543
No 165
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=5e-39 Score=325.58 Aligned_cols=245 Identities=22% Similarity=0.381 Sum_probs=197.6
Q ss_pred HhHcccCCceeEEEEEEc-CCcEEEEEEeccccCChHHHHHHHHHHHcCCCCceecceeEEEe----------------c
Q 006922 329 AEVLGKGTFGMAYKAILE-DGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYYS----------------K 391 (625)
Q Consensus 329 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----------------~ 391 (625)
.+.||+|+||.||+|... +|+.||+|+++.. .+.+.+|++++.+++||||+++++++.. .
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (284)
T 2a19_B 16 IELIGSGGFGQVFKAKHRIDGKTYVIKRVKYN---NEKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKT 92 (284)
T ss_dssp EEEEECSSSCCEEEEEETTTCCEEEEEEEECC---SGGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---------CCEE
T ss_pred eeeeccCCceEEEEEEEcCCCeEEEEEEeccc---cHHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccccccccCc
Confidence 357999999999999975 7999999999754 2567899999999999999999999864 3
Q ss_pred CceEEEEEeccCCChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEecc
Q 006922 392 DEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDL 471 (625)
Q Consensus 392 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~Df 471 (625)
...++||||+++|+|.+++..... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+||
T Consensus 93 ~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Df 166 (284)
T 2a19_B 93 KCLFIQMEFCDKGTLEQWIEKRRG---EKLDKVLALELFEQITKGVDYIHSKK---LINRDLKPSNIFLVDTKQVKIGDF 166 (284)
T ss_dssp EEEEEEECCCCSCBHHHHHHHGGG---SCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCC
T ss_pred ceEEEEEeccCCCCHHHHHhhccC---CCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCCHHHEEEcCCCCEEECcc
Confidence 457899999999999999976432 24899999999999999999999998 999999999999999999999999
Q ss_pred ccccccccc--ccccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhccccc
Q 006922 472 GLTTITSAL--APVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTA 549 (625)
Q Consensus 472 Gla~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 549 (625)
|+++..... .....++..|+|||.+.+..++.++||||||+++|||++|..|+... ..... . .......
T Consensus 167 g~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~-----~~~~~---~-~~~~~~~ 237 (284)
T 2a19_B 167 GLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET-----SKFFT---D-LRDGIIS 237 (284)
T ss_dssp TTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH-----HHHHH---H-HHTTCCC
T ss_pred hhheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH-----HHHHH---H-hhccccc
Confidence 999876432 23346788999999999999999999999999999999999887421 11111 1 1111110
Q ss_pred ccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCCCCC
Q 006922 550 EVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPNDSEN 604 (625)
Q Consensus 550 ~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~~~~ 604 (625)
... ..++.+++.+||..||.+|||+.|+++.|+.++.....+
T Consensus 238 ----------~~~---~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~~~ 279 (284)
T 2a19_B 238 ----------DIF---DKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPEKN 279 (284)
T ss_dssp ----------TTS---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC-----
T ss_pred ----------ccC---CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCCcc
Confidence 111 124667888999999999999999999999998765443
No 166
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=7e-39 Score=339.92 Aligned_cols=238 Identities=17% Similarity=0.319 Sum_probs=188.7
Q ss_pred hHcccCCceeEEEEEEcCCcEEEEEEeccccCC---hHHHHHHHHHHHcCC--CCceecceeEEEecCceEEEEEeccCC
Q 006922 330 EVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVG---KRDFEQQMEIVGSIR--HENVVELKAYYYSKDEKLMVYDYYSLG 404 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~---~~~~~~e~~~l~~l~--h~niv~l~~~~~~~~~~~lv~e~~~~g 404 (625)
+.||+|+||+||++...+++.||||++...... .+.+.+|++++.+++ ||||+++++++...+..++||| +.++
T Consensus 62 ~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~E-~~~~ 140 (390)
T 2zmd_A 62 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNI 140 (390)
T ss_dssp EEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE-CCSE
T ss_pred EEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEEe-cCCC
Confidence 579999999999999878999999999765433 256889999999996 5999999999999999999999 6788
Q ss_pred ChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEecccccccccccc---
Q 006922 405 SVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALA--- 481 (625)
Q Consensus 405 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~--- 481 (625)
+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+|||++ ++.+||+|||+++......
T Consensus 141 ~L~~~l~~~~-----~~~~~~~~~i~~qi~~aL~~lH~~~---ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~~~ 211 (390)
T 2zmd_A 141 DLNSWLKKKK-----SIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSV 211 (390)
T ss_dssp EHHHHHHHCS-----SCCHHHHHHHHHHHHHHHHHHHTTT---CCCCCCCGGGEEES-SSCEEECCCSSSCCC-------
T ss_pred CHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHEEEE-CCeEEEEecCccccccCCCccc
Confidence 9999997643 4889999999999999999999998 99999999999995 5899999999998764322
Q ss_pred --cccccCCCcCCccccCC-----------CCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccc
Q 006922 482 --PVIARAAGYRAPEVTDS-----------RKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWT 548 (625)
Q Consensus 482 --~~~~~~~~y~aPE~~~~-----------~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 548 (625)
....||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... ...+.........
T Consensus 212 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~-----~~~~~~~~~~~~~ 286 (390)
T 2zmd_A 212 VKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ-----ISKLHAIIDPNHE 286 (390)
T ss_dssp --CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCH-----HHHHHHHHCTTSC
T ss_pred cCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHH-----HHHHHHHhCcccc
Confidence 23468899999999864 46889999999999999999999999754321 1112222211110
Q ss_pred cccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006922 549 AEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR 592 (625)
Q Consensus 549 ~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 592 (625)
.... ... ..++.+++.+||+.||.+|||+.|+++
T Consensus 287 -----~~~~--~~~---~~~~~~li~~~L~~dP~~Rps~~ell~ 320 (390)
T 2zmd_A 287 -----IEFP--DIP---EKDLQDVLKCCLKRDPKQRISIPELLA 320 (390)
T ss_dssp -----CCCC--CCS---CHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred -----CCCC--ccc---hHHHHHHHHHHcccChhhCCCHHHHhh
Confidence 0000 111 235677888999999999999999985
No 167
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=5.8e-39 Score=330.81 Aligned_cols=250 Identities=24% Similarity=0.398 Sum_probs=195.5
Q ss_pred hHcccCCceeEEEEEE-cCCcEEEEEEeccccC-ChHHHHHHHHHHHcCCCCceecceeEEEe----cCceEEEEEeccC
Q 006922 330 EVLGKGTFGMAYKAIL-EDGTTVVVKRLKDVNV-GKRDFEQQMEIVGSIRHENVVELKAYYYS----KDEKLMVYDYYSL 403 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~~lv~e~~~~ 403 (625)
+.||+|+||.||++.. .+|+.||||++..... ..+.+.+|++++.+++||||+++++++.. ....++||||+++
T Consensus 35 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~ 114 (317)
T 2buj_A 35 QKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKR 114 (317)
T ss_dssp EEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEEEECCTT
T ss_pred EEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEEEEeCCC
Confidence 6799999999999996 5799999999865432 34678899999999999999999999973 3467899999999
Q ss_pred CChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEecccccccccccc--
Q 006922 404 GSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALA-- 481 (625)
Q Consensus 404 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~-- 481 (625)
|+|.+++..... ....+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 115 ~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~ 190 (317)
T 2buj_A 115 GTLWNEIERLKD-KGNFLTEDQILWLLLGICRGLEAIHAKG---YAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEG 190 (317)
T ss_dssp CBHHHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCSSCEESCEEEES
T ss_pred CcHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEcCCCCEEEEecCcchhccccccc
Confidence 999999976432 2235899999999999999999999998 9999999999999999999999999987653211
Q ss_pred ----------cccccCCCcCCccccCCCC---CCCccchhhhHHHHHHHHhCCCCCCCCC--CcchhhHHHHHHHHhhcc
Q 006922 482 ----------PVIARAAGYRAPEVTDSRK---ATQASDVYSFGVVLLEILTGKSPIHTTG--GDELVHLVRWVHSVVREE 546 (625)
Q Consensus 482 ----------~~~~~~~~y~aPE~~~~~~---~~~~~DvwS~Gvil~elltG~~p~~~~~--~~~~~~~~~~~~~~~~~~ 546 (625)
....++..|+|||.+.+.. ++.++||||||+++|||++|+.||.... ....... . ...
T Consensus 191 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~---~----~~~ 263 (317)
T 2buj_A 191 SRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALA---V----QNQ 263 (317)
T ss_dssp HHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHH---H----HCC
T ss_pred ccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHH---h----hcc
Confidence 1234688899999987654 6889999999999999999999995321 1111110 0 000
Q ss_pred cccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCC
Q 006922 547 WTAEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPN 600 (625)
Q Consensus 547 ~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~ 600 (625)
...+.......++.+++.+||+.||.+||++.|+++.|+.+...
T Consensus 264 ----------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~ 307 (317)
T 2buj_A 264 ----------LSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPP 307 (317)
T ss_dssp ------------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCC
T ss_pred ----------CCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCC
Confidence 00111112234677888899999999999999999999998653
No 168
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=3.3e-39 Score=334.36 Aligned_cols=251 Identities=21% Similarity=0.329 Sum_probs=197.8
Q ss_pred hHcccCCceeEEEEEE------cCCcEEEEEEeccccC--ChHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEec
Q 006922 330 EVLGKGTFGMAYKAIL------EDGTTVVVKRLKDVNV--GKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYY 401 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~------~~g~~vavK~l~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 401 (625)
+.||+|+||+||+|.. .+++.||||++..... ....+.+|+.++.+++||||+++++++...+..++||||+
T Consensus 36 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 115 (327)
T 2yfx_A 36 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELM 115 (327)
T ss_dssp EECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred EEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCcEEEEecC
Confidence 5699999999999983 3577899999975432 2356889999999999999999999999999999999999
Q ss_pred cCCChhhhhccccCC--CCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCC---CCCeeEeccccccc
Q 006922 402 SLGSVSAMLHSERGE--GRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNS---QQYGCVSDLGLTTI 476 (625)
Q Consensus 402 ~~g~L~~~l~~~~~~--~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~---~~~~kl~DfGla~~ 476 (625)
++|+|.+++...... ....+++..+..++.|++.||+|||+.+ |+||||||+|||++. +..+||+|||+++.
T Consensus 116 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~---i~H~dlkp~NIli~~~~~~~~~kl~Dfg~~~~ 192 (327)
T 2yfx_A 116 AGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARD 192 (327)
T ss_dssp TTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEECCCHHHHH
T ss_pred CCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC---eecCcCCHhHEEEecCCCcceEEECccccccc
Confidence 999999999875421 1234899999999999999999999998 999999999999994 44699999999975
Q ss_pred cccc-----ccccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHh-CCCCCCCCCCcchhhHHHHHHHHhhcccccc
Q 006922 477 TSAL-----APVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAE 550 (625)
Q Consensus 477 ~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 550 (625)
.... .....++..|+|||.+.+..++.++||||||+++|||+| |+.||......+. ...+. ....
T Consensus 193 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~---~~~~~---~~~~--- 263 (327)
T 2yfx_A 193 IYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEV---LEFVT---SGGR--- 263 (327)
T ss_dssp HHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHH---HHHHH---TTCC---
T ss_pred cccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHH---HHHHh---cCCC---
Confidence 4322 122356778999999988889999999999999999999 9999976443222 22111 1110
Q ss_pred cccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCC
Q 006922 551 VFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPN 600 (625)
Q Consensus 551 ~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~ 600 (625)
..........+.+++.+||+.||.+||++.|+++.|+.+...
T Consensus 264 --------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~ 305 (327)
T 2yfx_A 264 --------MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 305 (327)
T ss_dssp --------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred --------CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcC
Confidence 001111234677888899999999999999999999988664
No 169
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=5.6e-39 Score=335.97 Aligned_cols=255 Identities=21% Similarity=0.287 Sum_probs=193.7
Q ss_pred hHcccCCceeEEEEEE-cCCcEEEEEEeccccC---ChHHHHHHHHHHHcCCCCceecceeEEEec--------CceEEE
Q 006922 330 EVLGKGTFGMAYKAIL-EDGTTVVVKRLKDVNV---GKRDFEQQMEIVGSIRHENVVELKAYYYSK--------DEKLMV 397 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--------~~~~lv 397 (625)
+.||+|+||+||+|.. .+|+.||+|++..... ....+.+|++++.+++||||+++++++... +..++|
T Consensus 23 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~lv 102 (351)
T 3mi9_A 23 AKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLV 102 (351)
T ss_dssp EECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------CEEEEE
T ss_pred EEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCCceEEEE
Confidence 5799999999999996 5799999999865432 235788999999999999999999999873 467999
Q ss_pred EEeccCCChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEecccccccc
Q 006922 398 YDYYSLGSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTIT 477 (625)
Q Consensus 398 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~ 477 (625)
|||+++ +|.+.+..... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 103 ~e~~~~-~l~~~l~~~~~----~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~ 174 (351)
T 3mi9_A 103 FDFCEH-DLAGLLSNVLV----KFTLSEIKRVMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAF 174 (351)
T ss_dssp EECCSE-EHHHHHHCTTS----CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EeccCC-CHHHHHhhccC----CCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCHHHEEEcCCCCEEEccchhcccc
Confidence 999986 77777765432 4899999999999999999999998 999999999999999999999999999865
Q ss_pred ccc-------ccccccCCCcCCccccCC-CCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhccccc
Q 006922 478 SAL-------APVIARAAGYRAPEVTDS-RKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTA 549 (625)
Q Consensus 478 ~~~-------~~~~~~~~~y~aPE~~~~-~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 549 (625)
... .....+|..|+|||++.+ ..++.++|||||||++|||+||+.||......+....+.............
T Consensus 175 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 254 (351)
T 3mi9_A 175 SLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWP 254 (351)
T ss_dssp CCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTST
T ss_pred cccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhcc
Confidence 421 123456888999998876 457999999999999999999999998755433333222221111111111
Q ss_pred cccccccc--------CCCCcHHH------HHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006922 550 EVFDVELL--------RYPNIEEE------MVEMLQIAMSCVVRMPDQRPKMPDVVR 592 (625)
Q Consensus 550 ~~~d~~~~--------~~~~~~~~------~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 592 (625)
...+.... ......+. ...+.+++.+|++.||++|||+.|+++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 311 (351)
T 3mi9_A 255 NVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 311 (351)
T ss_dssp TGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhC
Confidence 11110000 00111111 234778899999999999999999987
No 170
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=4e-39 Score=338.28 Aligned_cols=254 Identities=19% Similarity=0.306 Sum_probs=195.6
Q ss_pred hHcccCCceeEEEEEEc-CCcEEEEEEeccccC--ChHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccCCCh
Q 006922 330 EVLGKGTFGMAYKAILE-DGTTVVVKRLKDVNV--GKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLGSV 406 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 406 (625)
+.||+|+||+||++... +|+.||+|+++.... ..+.+.+|++++.+++||||+++++++...+..++||||+++++|
T Consensus 39 ~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 118 (360)
T 3eqc_A 39 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL 118 (360)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECCCTTCBH
T ss_pred eeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEECCCCCCH
Confidence 56999999999999965 689999999976432 235688999999999999999999999999999999999999999
Q ss_pred hhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhc-CCCCceecCCCCCCEEeCCCCCeeEecccccccccc-ccccc
Q 006922 407 SAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAA-NGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSA-LAPVI 484 (625)
Q Consensus 407 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~-~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~-~~~~~ 484 (625)
.+++.... .+++..+..++.+++.||+|||+. + |+||||||+|||++.++.+||+|||+++.... .....
T Consensus 119 ~~~l~~~~-----~~~~~~~~~i~~~i~~~l~~lh~~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 190 (360)
T 3eqc_A 119 DQVLKKAG-----RIPEQILGKVSIAVIKGLTYLREKHK---IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF 190 (360)
T ss_dssp HHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHHHC---CCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC----
T ss_pred HHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHhCC---EEcCCccHHHEEECCCCCEEEEECCCCcccccccccCC
Confidence 99997653 389999999999999999999996 6 99999999999999999999999999976532 22345
Q ss_pred ccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHH-hh---------ccc-------
Q 006922 485 ARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSV-VR---------EEW------- 547 (625)
Q Consensus 485 ~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~-~~---------~~~------- 547 (625)
.++..|+|||++.+..++.++|||||||++|||++|+.||......+........... .. ...
T Consensus 191 ~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (360)
T 3eqc_A 191 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMD 270 (360)
T ss_dssp CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC---------------------------
T ss_pred CCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcccccccC
Confidence 7889999999999999999999999999999999999999765433322111000000 00 000
Q ss_pred ------ccccccc----cccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006922 548 ------TAEVFDV----ELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR 592 (625)
Q Consensus 548 ------~~~~~d~----~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 592 (625)
..+..+. .....+ ......++.+++.+||+.||++|||+.|+++
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 324 (360)
T 3eqc_A 271 SRPPMAIFELLDYIVNEPPPKLP-SGVFSLEFQDFVNKCLIKNPAERADLKQLMV 324 (360)
T ss_dssp ---CCCHHHHHHHHHHSCCCCCC-TTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred CCCcccchhhhhHHhccCCCCCC-cccccHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 0000000 000000 0112335778888999999999999999986
No 171
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=3.1e-39 Score=336.38 Aligned_cols=242 Identities=21% Similarity=0.310 Sum_probs=192.1
Q ss_pred HhHcccCCceeEEEEEEc-CCcEEEEEEeccccCChHHHHHHHHHHHcC-CCCceecceeEEEecCceEEEEEeccCCCh
Q 006922 329 AEVLGKGTFGMAYKAILE-DGTTVVVKRLKDVNVGKRDFEQQMEIVGSI-RHENVVELKAYYYSKDEKLMVYDYYSLGSV 406 (625)
Q Consensus 329 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 406 (625)
.+.||+|+||+||++... +|+.||+|+++... ....+|++++.++ +||||+++++++.+.+..++||||+++|+|
T Consensus 27 ~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~---~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~gg~L 103 (342)
T 2qr7_A 27 KEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSK---RDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGEL 103 (342)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEETTT---CCCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEccc---CChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeCCCCCcH
Confidence 357999999999999965 68999999997643 2456788888887 799999999999999999999999999999
Q ss_pred hhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCC----CCeeEeccccccccccc--
Q 006922 407 SAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQ----QYGCVSDLGLTTITSAL-- 480 (625)
Q Consensus 407 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~----~~~kl~DfGla~~~~~~-- 480 (625)
.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+|||+.++ +.+||+|||+++.....
T Consensus 104 ~~~i~~~~-----~~~~~~~~~~~~qi~~al~~lH~~g---ivHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~~ 175 (342)
T 2qr7_A 104 LDKILRQK-----FFSEREASAVLFTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENG 175 (342)
T ss_dssp HHHHHTCT-----TCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTTC
T ss_pred HHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---cEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCCC
Confidence 99987543 4899999999999999999999998 9999999999998543 24999999999876432
Q ss_pred -ccccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccccccccccCC
Q 006922 481 -APVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRY 559 (625)
Q Consensus 481 -~~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 559 (625)
.....+|..|+|||++.+..++.++|||||||++|||++|+.||..............+.. .. ++......
T Consensus 176 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~---~~-----~~~~~~~~ 247 (342)
T 2qr7_A 176 LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGS---GK-----FSLSGGYW 247 (342)
T ss_dssp CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHH---CC-----CCCCSTTT
T ss_pred ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHcc---CC-----cccCcccc
Confidence 2334678899999999888899999999999999999999999986543333333322211 11 00000001
Q ss_pred CCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006922 560 PNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR 592 (625)
Q Consensus 560 ~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 592 (625)
+.. ..++.+++.+|+..||++||++.|+++
T Consensus 248 ~~~---s~~~~~li~~~L~~dP~~R~t~~~il~ 277 (342)
T 2qr7_A 248 NSV---SDTAKDLVSKMLHVDPHQRLTAALVLR 277 (342)
T ss_dssp TTS---CHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred ccC---CHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 112 235667778999999999999999986
No 172
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=2.7e-39 Score=332.93 Aligned_cols=253 Identities=27% Similarity=0.360 Sum_probs=200.8
Q ss_pred HhHcccCCceeEEEEEE------cCCcEEEEEEeccccCC--hHHHHHHHHHHHcC-CCCceecceeEEEecC-ceEEEE
Q 006922 329 AEVLGKGTFGMAYKAIL------EDGTTVVVKRLKDVNVG--KRDFEQQMEIVGSI-RHENVVELKAYYYSKD-EKLMVY 398 (625)
Q Consensus 329 ~~~lg~G~~g~Vy~~~~------~~g~~vavK~l~~~~~~--~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~-~~~lv~ 398 (625)
.+.||+|+||+||+|.. .+++.||||+++..... .+.+.+|++++.++ +||||+++++++...+ ..++||
T Consensus 32 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~~lv~ 111 (316)
T 2xir_A 32 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIV 111 (316)
T ss_dssp EEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEEE
T ss_pred eeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCCceEEEE
Confidence 35799999999999984 34689999999865332 35688999999999 7999999999998755 589999
Q ss_pred EeccCCChhhhhccccCCC-----------CccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCee
Q 006922 399 DYYSLGSVSAMLHSERGEG-----------RIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGC 467 (625)
Q Consensus 399 e~~~~g~L~~~l~~~~~~~-----------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~k 467 (625)
||+++|+|.+++....... ...+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+|
T Consensus 112 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dikp~Nil~~~~~~~k 188 (316)
T 2xir_A 112 EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVK 188 (316)
T ss_dssp ECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEE
T ss_pred EcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCC---cccccCccceEEECCCCCEE
Confidence 9999999999998654210 123789999999999999999999998 99999999999999999999
Q ss_pred Eecccccccccccc-----cccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHh-CCCCCCCCCCcchhhHHHHHHH
Q 006922 468 VSDLGLTTITSALA-----PVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHS 541 (625)
Q Consensus 468 l~DfGla~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~ 541 (625)
|+|||+++...... ....++..|+|||.+.+..++.++||||||+++|||+| |+.||......+.. ...+.
T Consensus 189 l~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~--~~~~~- 265 (316)
T 2xir_A 189 ICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF--CRRLK- 265 (316)
T ss_dssp ECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHH--HHHHH-
T ss_pred ECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhHHH--HHHhc-
Confidence 99999998654321 22346678999999988899999999999999999999 99999765433221 11111
Q ss_pred HhhcccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCC
Q 006922 542 VVREEWTAEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPN 600 (625)
Q Consensus 542 ~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~ 600 (625)
..... +.......++.+++.+||+.||.+|||+.|+++.|+.+...
T Consensus 266 ---~~~~~----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 311 (316)
T 2xir_A 266 ---EGTRM----------RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 311 (316)
T ss_dssp ---HTCCC----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ---cCccC----------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhh
Confidence 11000 00111223577888899999999999999999999987643
No 173
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=1e-38 Score=325.39 Aligned_cols=238 Identities=20% Similarity=0.302 Sum_probs=195.8
Q ss_pred hHcccCCceeEEEEEEc-CCcEEEEEEeccccC----ChHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccCC
Q 006922 330 EVLGKGTFGMAYKAILE-DGTTVVVKRLKDVNV----GKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLG 404 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~----~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 404 (625)
+.||+|+||+||++... +++.||+|++..... ..+.+.+|++++.+++||||+++++++.+.+..++||||++++
T Consensus 21 ~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 100 (294)
T 2rku_A 21 RFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRR 100 (294)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTTC
T ss_pred EEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEEecCCCC
Confidence 56999999999999965 588999999875432 2356889999999999999999999999999999999999999
Q ss_pred ChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEecccccccccc---cc
Q 006922 405 SVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSA---LA 481 (625)
Q Consensus 405 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~---~~ 481 (625)
+|.+++.... .+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++.... ..
T Consensus 101 ~L~~~~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~ 172 (294)
T 2rku_A 101 SLLELHKRRK-----ALTEPEARYYLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK 172 (294)
T ss_dssp BHHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEECCSTTCCB
T ss_pred CHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEcCCCCEEEEeccCceecccCcccc
Confidence 9999887543 4899999999999999999999998 99999999999999999999999999987542 22
Q ss_pred cccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccccccccccCCCC
Q 006922 482 PVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPN 561 (625)
Q Consensus 482 ~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 561 (625)
....++..|+|||.+.+..++.++||||||+++|||++|+.||......+.... ...... ..
T Consensus 173 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~------~~~~~~------------~~ 234 (294)
T 2rku_A 173 KVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLR------IKKNEY------------SI 234 (294)
T ss_dssp CCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHH------HHTTCC------------CC
T ss_pred ccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH------HhhccC------------CC
Confidence 334678889999999998999999999999999999999999976443222111 111100 00
Q ss_pred cHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006922 562 IEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRV 593 (625)
Q Consensus 562 ~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 593 (625)
.......+.+++.+||+.||++|||+.|+++.
T Consensus 235 ~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 235 PKHINPVAASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp CTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred ccccCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 01112356778889999999999999999873
No 174
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=5.9e-39 Score=328.60 Aligned_cols=238 Identities=19% Similarity=0.340 Sum_probs=196.5
Q ss_pred hHcccCCceeEEEEEE-cCCcEEEEEEecccc--CChHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccCCCh
Q 006922 330 EVLGKGTFGMAYKAIL-EDGTTVVVKRLKDVN--VGKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLGSV 406 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 406 (625)
+.||+|+||+||+|.. .+++.||+|++.... ...+.+.+|+.++.+++||||+++++++...+..++||||+++++|
T Consensus 28 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 107 (303)
T 3a7i_A 28 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSA 107 (303)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEEH
T ss_pred hhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEeCCCCcH
Confidence 5699999999999985 468999999997543 2347799999999999999999999999999999999999999999
Q ss_pred hhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEeccccccccccc---ccc
Q 006922 407 SAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSAL---APV 483 (625)
Q Consensus 407 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~---~~~ 483 (625)
.+++... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++...... ...
T Consensus 108 ~~~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 178 (303)
T 3a7i_A 108 LDLLEPG------PLDETQIATILREILKGLDYLHSEK---KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT 178 (303)
T ss_dssp HHHHTTS------CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECBTTBCCBCC
T ss_pred HHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCChheEEECCCCCEEEeecccceecCccccccCc
Confidence 9998642 4899999999999999999999998 999999999999999999999999999776432 223
Q ss_pred cccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccccccccccCCCCcH
Q 006922 484 IARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIE 563 (625)
Q Consensus 484 ~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 563 (625)
..++..|+|||.+.+..++.++||||||+++|||++|+.||......+.. ..+. ..... .. ..
T Consensus 179 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~---~~~~----~~~~~-----~~-----~~ 241 (303)
T 3a7i_A 179 FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVL---FLIP----KNNPP-----TL-----EG 241 (303)
T ss_dssp CCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH---HHHH----HSCCC-----CC-----CS
T ss_pred cCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHH---HHhh----cCCCC-----CC-----cc
Confidence 46788899999999999999999999999999999999999764332211 1111 11100 00 01
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006922 564 EEMVEMLQIAMSCVVRMPDQRPKMPDVVRV 593 (625)
Q Consensus 564 ~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 593 (625)
.....+.+++.+||..+|.+|||+.|+++.
T Consensus 242 ~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 271 (303)
T 3a7i_A 242 NYSKPLKEFVEACLNKEPSFRPTAKELLKH 271 (303)
T ss_dssp SCCHHHHHHHHHHCCSSGGGSCCHHHHTTC
T ss_pred ccCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 112356778889999999999999999874
No 175
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=8e-39 Score=332.65 Aligned_cols=237 Identities=20% Similarity=0.327 Sum_probs=195.5
Q ss_pred hHcccCCceeEEEEEEc-CCcEEEEEEeccccC----ChHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccCC
Q 006922 330 EVLGKGTFGMAYKAILE-DGTTVVVKRLKDVNV----GKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLG 404 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~----~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 404 (625)
+.||+|+||.||++... +++.||+|++..... ..+.+.+|+.++..++||||+++++++.+.+..++||||++++
T Consensus 47 ~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 126 (335)
T 2owb_A 47 RFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRR 126 (335)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTTC
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEecCCCC
Confidence 56999999999999965 588999999975432 2356889999999999999999999999999999999999999
Q ss_pred ChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEeccccccccccc---c
Q 006922 405 SVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSAL---A 481 (625)
Q Consensus 405 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~---~ 481 (625)
+|.+++.... .+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++..... .
T Consensus 127 ~L~~~~~~~~-----~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~ 198 (335)
T 2owb_A 127 SLLELHKRRK-----ALTEPEARYYLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK 198 (335)
T ss_dssp BHHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCCTTCEECCSTTCCB
T ss_pred CHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHCC---CEecCCCchhEEEcCCCCEEEeeccCceecccCcccc
Confidence 9999887543 3899999999999999999999998 999999999999999999999999999876422 2
Q ss_pred cccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccccccccccCCCC
Q 006922 482 PVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPN 561 (625)
Q Consensus 482 ~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 561 (625)
....++..|+|||.+.+..++.++||||||+++|||++|+.||......+.... + ..... .. +
T Consensus 199 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~---~---~~~~~-------~~---~- 261 (335)
T 2owb_A 199 KVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLR---I---KKNEY-------SI---P- 261 (335)
T ss_dssp CCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHH---H---HHTCC-------CC---C-
T ss_pred cccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHH---H---hcCCC-------CC---C-
Confidence 334678899999999998999999999999999999999999976443222111 1 11110 00 0
Q ss_pred cHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006922 562 IEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR 592 (625)
Q Consensus 562 ~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 592 (625)
......+.+++.+||+.||++||++.|+++
T Consensus 262 -~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 291 (335)
T 2owb_A 262 -KHINPVAASLIQKMLQTDPTARPTINELLN 291 (335)
T ss_dssp -TTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred -ccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 111235667888999999999999999987
No 176
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.9e-39 Score=335.71 Aligned_cols=260 Identities=17% Similarity=0.279 Sum_probs=193.8
Q ss_pred hHcccCCceeEEEEEEc-CCcEEEEEEeccccCC--hHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccCCCh
Q 006922 330 EVLGKGTFGMAYKAILE-DGTTVVVKRLKDVNVG--KRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLGSV 406 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~--~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 406 (625)
+.||+|+||+||+|... +++.||+|+++..... ...+.+|++++.+++||||+++++++...+..++||||++ |+|
T Consensus 8 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l 86 (324)
T 3mtl_A 8 DKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD-KDL 86 (324)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEECCS-EEH
T ss_pred EEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecccc-cCH
Confidence 56999999999999965 7899999999754322 2345679999999999999999999999999999999998 488
Q ss_pred hhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEecccccccccccc---cc
Q 006922 407 SAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALA---PV 483 (625)
Q Consensus 407 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~---~~ 483 (625)
.+++..... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...... ..
T Consensus 87 ~~~~~~~~~----~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~ 159 (324)
T 3mtl_A 87 KQYLDDCGN----IINMHNVKLFLFQLLRGLAYCHRQK---VLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDN 159 (324)
T ss_dssp HHHHHHTTT----CCCHHHHHHHHHHHHHHHHHHHHTT---EEESSCCGGGEEECTTCCEEECSSSEEECC---------
T ss_pred HHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCcCHHHEEECCCCCEEEccCcccccccCCcccccc
Confidence 888876432 4899999999999999999999998 9999999999999999999999999998654322 23
Q ss_pred cccCCCcCCccccCC-CCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhh---ccccccccccc----
Q 006922 484 IARAAGYRAPEVTDS-RKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVR---EEWTAEVFDVE---- 555 (625)
Q Consensus 484 ~~~~~~y~aPE~~~~-~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~d~~---- 555 (625)
..++..|+|||++.+ ..++.++||||+||++|||++|+.||......+.... +..... ...+....+..
T Consensus 160 ~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~---i~~~~~~~~~~~~~~~~~~~~~~~ 236 (324)
T 3mtl_A 160 EVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHF---IFRILGTPTEETWPGILSNEEFKT 236 (324)
T ss_dssp ---CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH---HHHHHCCCCTTTSTTGGGCHHHHH
T ss_pred ccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH---HHHHhCCCChHhchhhhcchhhcc
Confidence 356888999999876 5689999999999999999999999977544332222 222111 11111111000
Q ss_pred --ccCC--CC----cHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHHhhCCC
Q 006922 556 --LLRY--PN----IEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR--VIENVRPN 600 (625)
Q Consensus 556 --~~~~--~~----~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~--~L~~~~~~ 600 (625)
.... .. ......++.+++.+|++.||++|||+.|+++ .+..+...
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~ 291 (324)
T 3mtl_A 237 YNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLGER 291 (324)
T ss_dssp TCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCST
T ss_pred cccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChhhhhcccc
Confidence 0000 00 0011235678888999999999999999987 55665544
No 177
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=1.6e-38 Score=340.49 Aligned_cols=242 Identities=20% Similarity=0.304 Sum_probs=184.2
Q ss_pred HhHcccCCceeEEEEEEc-CCcEEEEEEeccccC---------ChHHHHHHHHHHHcCCCCceecceeEEEecCceEEEE
Q 006922 329 AEVLGKGTFGMAYKAILE-DGTTVVVKRLKDVNV---------GKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVY 398 (625)
Q Consensus 329 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~---------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 398 (625)
.+.||+|+||+||+|... +++.||||++..... ....+.+|++++.+++||||+++++++.. +..++||
T Consensus 140 ~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~-~~~~lv~ 218 (419)
T 3i6u_A 140 SKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA-EDYYIVL 218 (419)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES-SEEEEEE
T ss_pred EeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec-CceEEEE
Confidence 356999999999999954 689999999975421 11358899999999999999999999754 5689999
Q ss_pred EeccCCChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCC---CeeEecccccc
Q 006922 399 DYYSLGSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQ---YGCVSDLGLTT 475 (625)
Q Consensus 399 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~---~~kl~DfGla~ 475 (625)
||+++|+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++ .+||+|||+++
T Consensus 219 e~~~~g~L~~~l~~~~-----~~~~~~~~~i~~qi~~~l~~LH~~~---ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~ 290 (419)
T 3i6u_A 219 ELMEGGELFDKVVGNK-----RLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSK 290 (419)
T ss_dssp ECCTTCBGGGGTSSSC-----CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESSSSSSCCEEECCSSTTT
T ss_pred EcCCCCcHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEecCCCcceEEEeecccce
Confidence 9999999999887543 4899999999999999999999998 99999999999997554 59999999998
Q ss_pred cccccc--cccccCCCcCCccccCC---CCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccc
Q 006922 476 ITSALA--PVIARAAGYRAPEVTDS---RKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAE 550 (625)
Q Consensus 476 ~~~~~~--~~~~~~~~y~aPE~~~~---~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 550 (625)
...... ....||..|+|||++.+ ..++.++|||||||++|||++|+.||......... ...+. .....
T Consensus 291 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~--~~~i~----~~~~~- 363 (419)
T 3i6u_A 291 ILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL--KDQIT----SGKYN- 363 (419)
T ss_dssp SCC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCH--HHHHH----TTCCC-
T ss_pred ecCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHH--HHHHh----cCCCC-
Confidence 765432 34568999999999853 57888999999999999999999999764432211 11111 11000
Q ss_pred cccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006922 551 VFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR 592 (625)
Q Consensus 551 ~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 592 (625)
+.+.. ......++.+++.+|++.||++|||+.|+++
T Consensus 364 -~~~~~-----~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 399 (419)
T 3i6u_A 364 -FIPEV-----WAEVSEKALDLVKKLLVVDPKARFTTEEALR 399 (419)
T ss_dssp -CCHHH-----HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred -CCchh-----hcccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence 00000 0011345778888999999999999999986
No 178
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=2.7e-39 Score=335.30 Aligned_cols=252 Identities=16% Similarity=0.232 Sum_probs=186.2
Q ss_pred hHcccCCceeEEEEEE-cCCcEEEEEEeccccCC---hHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccCCC
Q 006922 330 EVLGKGTFGMAYKAIL-EDGTTVVVKRLKDVNVG---KRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLGS 405 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 405 (625)
+.||+|+||+||+|.. .+++.||||+++..... .+.+.+|++++.+++||||+++++++...+..++||||+++ +
T Consensus 40 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~ 118 (329)
T 3gbz_A 40 TKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAEN-D 118 (329)
T ss_dssp EEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEEEECCSE-E
T ss_pred EEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEEEecCCC-C
Confidence 5799999999999995 47899999999754322 34578999999999999999999999999999999999985 9
Q ss_pred hhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeC-----CCCCeeEeccccccccccc
Q 006922 406 VSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLN-----SQQYGCVSDLGLTTITSAL 480 (625)
Q Consensus 406 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~-----~~~~~kl~DfGla~~~~~~ 480 (625)
|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+|||++ .++.+||+|||+++.....
T Consensus 119 L~~~~~~~~-----~~~~~~~~~i~~ql~~~l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~~ 190 (329)
T 3gbz_A 119 LKKYMDKNP-----DVSMRVIKSFLYQLINGVNFCHSRR---CLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIP 190 (329)
T ss_dssp HHHHHHHCT-----TCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC--
T ss_pred HHHHHhhcC-----CCCHHHHHHHHHHHHHHHHHHHhCC---EECCCCCHHHEEEecCCCCccceEEECcCCCccccCCc
Confidence 999987653 3899999999999999999999998 99999999999994 4455999999999876422
Q ss_pred ---ccccccCCCcCCccccCCC-CCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHh--hcccccccc--
Q 006922 481 ---APVIARAAGYRAPEVTDSR-KATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVV--REEWTAEVF-- 552 (625)
Q Consensus 481 ---~~~~~~~~~y~aPE~~~~~-~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-- 552 (625)
.....+|..|+|||++.+. .++.++|||||||++|||++|+.||......+.. .......- .........
T Consensus 191 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 268 (329)
T 3gbz_A 191 IRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQL--FKIFEVLGLPDDTTWPGVTAL 268 (329)
T ss_dssp ---------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH--HHHHHHHCCCCTTTSTTGGGS
T ss_pred ccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHH--HHHHHHhCCCchhhhhhhhhh
Confidence 2234578889999998764 5899999999999999999999999764432221 11111110 000000000
Q ss_pred ---cccccC--CCCcHH-----HHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006922 553 ---DVELLR--YPNIEE-----EMVEMLQIAMSCVVRMPDQRPKMPDVVR 592 (625)
Q Consensus 553 ---d~~~~~--~~~~~~-----~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 592 (625)
...... ...... ...++.+++.+||+.||++|||+.|+++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 269 PDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp TTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 000000 000011 1245678888999999999999999976
No 179
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=1.7e-38 Score=320.40 Aligned_cols=241 Identities=21% Similarity=0.326 Sum_probs=194.7
Q ss_pred HhHcccCCceeEEEEEEc-CCcEEEEEEeccccC--ChHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccCCC
Q 006922 329 AEVLGKGTFGMAYKAILE-DGTTVVVKRLKDVNV--GKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLGS 405 (625)
Q Consensus 329 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 405 (625)
.+.||+|+||+||+|... +++.||+|++..... ..+.+.+|++++..++||||+++++++.+.+..++||||+++++
T Consensus 12 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 91 (276)
T 2yex_A 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 91 (276)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTEE
T ss_pred EEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEecCCCc
Confidence 357999999999999965 689999999975432 23678999999999999999999999999999999999999999
Q ss_pred hhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEeccccccccccc-----
Q 006922 406 VSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSAL----- 480 (625)
Q Consensus 406 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~----- 480 (625)
|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 92 L~~~l~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 163 (276)
T 2yex_A 92 LFDRIEPDI-----GMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL 163 (276)
T ss_dssp GGGGSBTTT-----BCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECC
T ss_pred HHHHHhhcc-----CCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCChHHEEEccCCCEEEeeCCCccccCCCcchhc
Confidence 999987532 4899999999999999999999998 999999999999999999999999999765321
Q ss_pred ccccccCCCcCCccccCCCCC-CCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccccccccccCC
Q 006922 481 APVIARAAGYRAPEVTDSRKA-TQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRY 559 (625)
Q Consensus 481 ~~~~~~~~~y~aPE~~~~~~~-~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 559 (625)
.....++..|+|||.+.+..+ +.++||||||+++|||++|+.||........ ....+.. ... . .
T Consensus 164 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~~~~~----~~~---~-------~ 228 (276)
T 2yex_A 164 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ-EYSDWKE----KKT---Y-------L 228 (276)
T ss_dssp BCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSH-HHHHHHT----TCT---T-------S
T ss_pred ccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHH-HHHHhhh----ccc---c-------c
Confidence 223467888999999987665 7799999999999999999999976543221 1111111 000 0 0
Q ss_pred CCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006922 560 PNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR 592 (625)
Q Consensus 560 ~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 592 (625)
+........+.+++.+|++.||.+|||+.|+++
T Consensus 229 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 229 NPWKKIDSAPLALLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CchhhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence 011112235677888999999999999999975
No 180
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=1.6e-39 Score=328.55 Aligned_cols=249 Identities=20% Similarity=0.298 Sum_probs=195.3
Q ss_pred hHcccCCceeEEEEEEc-CCcEEEEEEeccccCC---hHHHHHHHHHHHcCCCCceecceeEEEe--cCceEEEEEeccC
Q 006922 330 EVLGKGTFGMAYKAILE-DGTTVVVKRLKDVNVG---KRDFEQQMEIVGSIRHENVVELKAYYYS--KDEKLMVYDYYSL 403 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~lv~e~~~~ 403 (625)
+.||+|+||+||++... +|+.||+|++...... .+.+.+|++++.+++||||+++++++.. .+..++||||+++
T Consensus 12 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~ 91 (279)
T 2w5a_A 12 YTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEG 91 (279)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEEEECCTT
T ss_pred hhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEEEeCCCC
Confidence 56999999999999965 6899999999765433 3568899999999999999999998864 5678999999999
Q ss_pred CChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcC--CCCceecCCCCCCEEeCCCCCeeEecccccccccccc
Q 006922 404 GSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAAN--GGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALA 481 (625)
Q Consensus 404 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~--~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~ 481 (625)
++|.+++..... ....+++..+..++.|++.||+|||+.+ ..+|+||||||+||+++.++.+||+|||+++......
T Consensus 92 ~~L~~~l~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~~~~~~ 170 (279)
T 2w5a_A 92 GDLASVITKGTK-ERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDT 170 (279)
T ss_dssp EEHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHHHC---C
T ss_pred CCHHHHHHhhcc-cCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchheeecccc
Confidence 999999976432 2234899999999999999999999986 2349999999999999999999999999998765332
Q ss_pred ---cccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccccccccccC
Q 006922 482 ---PVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLR 558 (625)
Q Consensus 482 ---~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 558 (625)
....++..|+|||.+.+..++.++||||||+++|||++|+.||......+. ...+ ..+....
T Consensus 171 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~---~~~i----~~~~~~~-------- 235 (279)
T 2w5a_A 171 SFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKEL---AGKI----REGKFRR-------- 235 (279)
T ss_dssp HHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH---HHHH----HHTCCCC--------
T ss_pred ccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHH---HHHH----hhccccc--------
Confidence 234678899999999988999999999999999999999999976543222 1111 1111100
Q ss_pred CCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHh
Q 006922 559 YPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIEN 596 (625)
Q Consensus 559 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~ 596 (625)
. ......++.+++.+||+.||++||++.|+++.+..
T Consensus 236 ~--~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~ 271 (279)
T 2w5a_A 236 I--PYRYSDELNEIITRMLNLKDYHRPSVEEILENPLI 271 (279)
T ss_dssp C--CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred C--CcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhh
Confidence 0 11122456778889999999999999999986643
No 181
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=1.8e-39 Score=334.75 Aligned_cols=258 Identities=19% Similarity=0.313 Sum_probs=190.7
Q ss_pred hHcccCCceeEEEEEEcCCcEEEEEEeccccC---ChHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccCCCh
Q 006922 330 EVLGKGTFGMAYKAILEDGTTVVVKRLKDVNV---GKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLGSV 406 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~---~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 406 (625)
+.||+|+||+||+|...+ .||+|+++.... ..+.+.+|++++.+++||||+++++++...+..++||||+++++|
T Consensus 39 ~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e~~~~~~L 116 (319)
T 2y4i_B 39 ELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTL 116 (319)
T ss_dssp CBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECBCCCSEEH
T ss_pred eEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEeecccCCcH
Confidence 569999999999998753 499999975432 235678899999999999999999999999999999999999999
Q ss_pred hhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEecccccccccc-------
Q 006922 407 SAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSA------- 479 (625)
Q Consensus 407 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~------- 479 (625)
.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++ ++.+||+|||+++....
T Consensus 117 ~~~l~~~~----~~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~~~~ 188 (319)
T 2y4i_B 117 YSVVRDAK----IVLDVNKTRQIAQEIVKGMGYLHAKG---ILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRRE 188 (319)
T ss_dssp HHHTTSSC----CCCCSHHHHHHHHHHHHHHHHHHHTT---CCCCCCCSTTEEEC---CCEECCCSCCC----------C
T ss_pred HHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCChhhEEEe-CCCEEEeecCCccccccccccccc
Confidence 99997643 24889999999999999999999998 99999999999998 68999999999875431
Q ss_pred -cccccccCCCcCCccccCC---------CCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhccccc
Q 006922 480 -LAPVIARAAGYRAPEVTDS---------RKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTA 549 (625)
Q Consensus 480 -~~~~~~~~~~y~aPE~~~~---------~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 549 (625)
......++..|+|||.+.. ..++.++||||||+++|||++|+.||......+... .+ ......
T Consensus 189 ~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~---~~----~~~~~~ 261 (319)
T 2y4i_B 189 DKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIW---QM----GTGMKP 261 (319)
T ss_dssp CSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHH---HH----HTTCCC
T ss_pred cccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH---Hh----ccCCCC
Confidence 1122347788999999864 457889999999999999999999997654322211 11 111100
Q ss_pred ccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCCCCCCCCCCCCCC
Q 006922 550 EVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPNDSENRPSSGNKSE 613 (625)
Q Consensus 550 ~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~~~~~~~~~~~~~ 613 (625)
.... . ....++.+++.+||..+|++|||+.|+++.|+.+.........+...|..
T Consensus 262 -----~~~~-~---~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~~~~~~~~~~~~~ 316 (319)
T 2y4i_B 262 -----NLSQ-I---GMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRNRRLSHPGHFWKS 316 (319)
T ss_dssp -----CCCC-S---SCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC----------------
T ss_pred -----CCCc-C---CCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhhccCCCCcccccc
Confidence 0000 0 01125677888999999999999999999999998876655444444443
No 182
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=8.9e-39 Score=324.12 Aligned_cols=242 Identities=19% Similarity=0.323 Sum_probs=198.1
Q ss_pred hHcccCCceeEEEEEEc-CCcEEEEEEecccc----CChHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccCC
Q 006922 330 EVLGKGTFGMAYKAILE-DGTTVVVKRLKDVN----VGKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLG 404 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 404 (625)
+.||+|+||+||+|... +++.||+|++.... ...+.+.+|++++.+++||||+++++++.+.+..++||||+++|
T Consensus 20 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 99 (284)
T 2vgo_A 20 RPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRG 99 (284)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTTE
T ss_pred heecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEEEeCCCC
Confidence 56999999999999965 68899999996532 22467899999999999999999999999999999999999999
Q ss_pred ChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEeccccccccccc-ccc
Q 006922 405 SVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSAL-APV 483 (625)
Q Consensus 405 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~-~~~ 483 (625)
+|.+++.... .+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||++...... ...
T Consensus 100 ~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 171 (284)
T 2vgo_A 100 ELYKELQKHG-----RFDEQRSATFMEELADALHYCHERK---VIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRT 171 (284)
T ss_dssp EHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECTTCCEEECCCTTCEECSSSCBCC
T ss_pred cHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEEcCCCCEEEecccccccCccccccc
Confidence 9999997653 3899999999999999999999998 999999999999999999999999998765432 233
Q ss_pred cccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccccccccccCCCCcH
Q 006922 484 IARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIE 563 (625)
Q Consensus 484 ~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 563 (625)
..++..|+|||.+.+..++.++||||||+++|||++|+.||......+... ...... ... .+.
T Consensus 172 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~------~~~~~~-------~~~--~~~-- 234 (284)
T 2vgo_A 172 MCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHR------RIVNVD-------LKF--PPF-- 234 (284)
T ss_dssp CCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH------HHHTTC-------CCC--CTT--
T ss_pred ccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHH------HHhccc-------cCC--CCc--
Confidence 467888999999999999999999999999999999999997644322211 111110 000 011
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHHhh
Q 006922 564 EEMVEMLQIAMSCVVRMPDQRPKMPDVVR--VIENV 597 (625)
Q Consensus 564 ~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~--~L~~~ 597 (625)
...++.+++.+|++.||.+||++.|+++ .++..
T Consensus 235 -~~~~~~~li~~~l~~~p~~Rps~~~ll~h~~~~~~ 269 (284)
T 2vgo_A 235 -LSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKAN 269 (284)
T ss_dssp -SCHHHHHHHHHHSCSSGGGSCCHHHHHTCHHHHHH
T ss_pred -CCHHHHHHHHHHhhcCHhhCCCHHHHhhCHHHHhh
Confidence 1235677888999999999999999986 44443
No 183
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.8e-39 Score=333.00 Aligned_cols=254 Identities=25% Similarity=0.404 Sum_probs=198.5
Q ss_pred HhHcccCCceeEEEEEE-----cCCcEEEEEEeccccCC-hHHHHHHHHHHHcCCCCceecceeEEEecC--ceEEEEEe
Q 006922 329 AEVLGKGTFGMAYKAIL-----EDGTTVVVKRLKDVNVG-KRDFEQQMEIVGSIRHENVVELKAYYYSKD--EKLMVYDY 400 (625)
Q Consensus 329 ~~~lg~G~~g~Vy~~~~-----~~g~~vavK~l~~~~~~-~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--~~~lv~e~ 400 (625)
.+.||+|+||.||++.. .+|+.||||++...... .+.+.+|++++.+++||||+++++++...+ ..++||||
T Consensus 46 ~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~ 125 (326)
T 2w1i_A 46 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEY 125 (326)
T ss_dssp EEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCEEEECC
T ss_pred eeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceEEEEEC
Confidence 35799999999999983 36899999999865332 367899999999999999999999987654 68999999
Q ss_pred ccCCChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEeccccccccccc
Q 006922 401 YSLGSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSAL 480 (625)
Q Consensus 401 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~ 480 (625)
+++++|.+++..... .+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 126 ~~~~~L~~~l~~~~~----~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~~ 198 (326)
T 2w1i_A 126 LPYGSLRDYLQKHKE----RIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQD 198 (326)
T ss_dssp CTTCBHHHHHHHSTT----SSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEEETTEEEECCCTTCEECCSS
T ss_pred CCCCCHHHHHHhccc----CCCHHHHHHHHHHHHHHHHHHHhCC---EeccCCCcceEEEcCCCcEEEecCcchhhcccc
Confidence 999999999986532 4899999999999999999999998 999999999999999999999999999876433
Q ss_pred cc------ccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCc---------chhhHHHHHHHHhhc
Q 006922 481 AP------VIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGD---------ELVHLVRWVHSVVRE 545 (625)
Q Consensus 481 ~~------~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~---------~~~~~~~~~~~~~~~ 545 (625)
.. ...++..|+|||.+.+..++.++||||||+++|||+||+.|+...... ........+...+..
T Consensus 199 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (326)
T 2w1i_A 199 KEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKN 278 (326)
T ss_dssp CSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHHT
T ss_pred ccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhhc
Confidence 21 223455699999998888999999999999999999999998532100 000001111111111
Q ss_pred ccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCC
Q 006922 546 EWTAEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRP 599 (625)
Q Consensus 546 ~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~ 599 (625)
.. ..+.......++.+++.+||+.||++|||+.|+++.|++++.
T Consensus 279 ~~----------~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~ 322 (326)
T 2w1i_A 279 NG----------RLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 322 (326)
T ss_dssp TC----------CCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CC----------CCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 10 011112233467788889999999999999999999998864
No 184
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=2.3e-39 Score=329.35 Aligned_cols=250 Identities=25% Similarity=0.422 Sum_probs=189.1
Q ss_pred hHcccCCceeEEEEEEc--CCc--EEEEEEeccccC----ChHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEec
Q 006922 330 EVLGKGTFGMAYKAILE--DGT--TVVVKRLKDVNV----GKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYY 401 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~--~g~--~vavK~l~~~~~----~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 401 (625)
+.||+|+||+||+|... +++ .||+|+++.... ..+.+.+|++++.+++||||+++++++...+ .++||||+
T Consensus 24 ~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~v~e~~ 102 (291)
T 1u46_A 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MKMVTELA 102 (291)
T ss_dssp EECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CEEEEECC
T ss_pred eeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ceeeEecc
Confidence 56999999999999853 333 689999875422 2357889999999999999999999998754 88999999
Q ss_pred cCCChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEecccccccccccc
Q 006922 402 SLGSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALA 481 (625)
Q Consensus 402 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~ 481 (625)
++++|.+++.... ..+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 103 ~~~~L~~~l~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~ 175 (291)
T 1u46_A 103 PLGSLLDRLRKHQ----GHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQND 175 (291)
T ss_dssp TTCBHHHHHHHHG----GGSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEEETTEEEECCCTTCEECCC-C
T ss_pred cCCCHHHHHHhcc----CCcCHHHHHHHHHHHHHHHHHHHhCC---cccCCCchheEEEcCCCCEEEccccccccccccc
Confidence 9999999997643 24899999999999999999999998 9999999999999999999999999998764322
Q ss_pred ------cccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHh-CCCCCCCCCCcchhhHHHHHHHHhhcccccccccc
Q 006922 482 ------PVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDV 554 (625)
Q Consensus 482 ------~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 554 (625)
....++..|+|||.+.+..++.++||||||+++|||++ |+.||......+... .......
T Consensus 176 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~------~~~~~~~------- 242 (291)
T 1u46_A 176 DHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILH------KIDKEGE------- 242 (291)
T ss_dssp CEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHH------HHHTSCC-------
T ss_pred cchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHH------HHHccCC-------
Confidence 12345667999999988889999999999999999999 999997654322221 1111110
Q ss_pred cccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCCCC
Q 006922 555 ELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPNDSE 603 (625)
Q Consensus 555 ~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~~~ 603 (625)
..+.......++.+++.+||..||++|||+.|+++.|+++.+....
T Consensus 243 ---~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~ 288 (291)
T 1u46_A 243 ---RLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTDMR 288 (291)
T ss_dssp ---CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-----
T ss_pred ---CCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCccchh
Confidence 0111122234677888899999999999999999999998876543
No 185
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.1e-39 Score=336.23 Aligned_cols=244 Identities=20% Similarity=0.300 Sum_probs=193.9
Q ss_pred HhHcccCCceeEEEEEE----cCCcEEEEEEecccc-----CChHHHHHHHHHHHcC-CCCceecceeEEEecCceEEEE
Q 006922 329 AEVLGKGTFGMAYKAIL----EDGTTVVVKRLKDVN-----VGKRDFEQQMEIVGSI-RHENVVELKAYYYSKDEKLMVY 398 (625)
Q Consensus 329 ~~~lg~G~~g~Vy~~~~----~~g~~vavK~l~~~~-----~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 398 (625)
.+.||+|+||+||+++. .+|+.||||+++... ...+.+.+|++++.++ +||||+++++++...+..++||
T Consensus 59 ~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 138 (355)
T 1vzo_A 59 LKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLIL 138 (355)
T ss_dssp EEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEEEEEE
T ss_pred EEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCceEEEEe
Confidence 36799999999999996 368999999997532 2345678899999999 6999999999999999999999
Q ss_pred EeccCCChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEeccccccccc
Q 006922 399 DYYSLGSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITS 478 (625)
Q Consensus 399 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~ 478 (625)
||+++|+|.+++.... .+++..+..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 139 e~~~~~~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 210 (355)
T 1vzo_A 139 DYINGGELFTHLSQRE-----RFTEHEVQIYVGEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSKEFV 210 (355)
T ss_dssp CCCCSCBHHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEESCSSEEEECC
T ss_pred ecCCCCCHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCcEEEeeCCCCeecc
Confidence 9999999999997643 3899999999999999999999998 9999999999999999999999999998653
Q ss_pred cc----ccccccCCCcCCccccCC--CCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccccc
Q 006922 479 AL----APVIARAAGYRAPEVTDS--RKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVF 552 (625)
Q Consensus 479 ~~----~~~~~~~~~y~aPE~~~~--~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 552 (625)
.. .....||..|+|||++.+ ..++.++|||||||++|||++|+.||.......... ..........
T Consensus 211 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~--~~~~~~~~~~------ 282 (355)
T 1vzo_A 211 ADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQA--EISRRILKSE------ 282 (355)
T ss_dssp GGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHH--HHHHHHHHCC------
T ss_pred cCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHH--HHHHHHhccC------
Confidence 22 223468999999999975 357899999999999999999999997644332221 1111111111
Q ss_pred cccccCCCCcHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHHH
Q 006922 553 DVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRP-----KMPDVVRVI 594 (625)
Q Consensus 553 d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RP-----s~~ev~~~L 594 (625)
.+........+.+++.+||..||.+|| +++|+++..
T Consensus 283 ------~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~ 323 (355)
T 1vzo_A 283 ------PPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL 323 (355)
T ss_dssp ------CCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred ------CCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCc
Confidence 011111223567788899999999999 889987643
No 186
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=1.8e-38 Score=329.43 Aligned_cols=255 Identities=21% Similarity=0.331 Sum_probs=192.4
Q ss_pred hHcccCCceeEEEEEEc-CCcEEEEEEeccccCC---hHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccCCC
Q 006922 330 EVLGKGTFGMAYKAILE-DGTTVVVKRLKDVNVG---KRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLGS 405 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 405 (625)
+.||+|+||+||+|... +|+.||+|++...... .+.+.+|++++.+++||||+++++++...+..++||||+++++
T Consensus 31 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 110 (331)
T 4aaa_A 31 GLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTI 110 (331)
T ss_dssp EEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSEEH
T ss_pred eEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEecCCcch
Confidence 57999999999999965 5899999999765433 2457899999999999999999999999999999999999999
Q ss_pred hhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEeccccccccccc---cc
Q 006922 406 VSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSAL---AP 482 (625)
Q Consensus 406 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~---~~ 482 (625)
|..++.... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++..... ..
T Consensus 111 l~~~~~~~~-----~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 182 (331)
T 4aaa_A 111 LDDLELFPN-----GLDYQVVQKYLFQIINGIGFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYD 182 (331)
T ss_dssp HHHHHHSTT-----CCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCTTC-----------
T ss_pred HHHHHhhcc-----CCCHHHHHHHHHHHHHHHHHHHHCC---EEccCcChheEEEcCCCcEEEEeCCCceeecCCccccC
Confidence 988765432 3899999999999999999999998 999999999999999999999999999765432 22
Q ss_pred ccccCCCcCCccccCCC-CCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHH--------HHHhh-cccccccc
Q 006922 483 VIARAAGYRAPEVTDSR-KATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWV--------HSVVR-EEWTAEVF 552 (625)
Q Consensus 483 ~~~~~~~y~aPE~~~~~-~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~--------~~~~~-~~~~~~~~ 552 (625)
...++..|+|||.+.+. .++.++|||||||++|||++|+.||......+....+... ..... ........
T Consensus 183 ~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (331)
T 4aaa_A 183 DEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVR 262 (331)
T ss_dssp -CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGTTCC
T ss_pred CCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhcccccccc
Confidence 34678889999998765 7899999999999999999999999765433222111100 00000 00001111
Q ss_pred cccccCCCCcH----HHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006922 553 DVELLRYPNIE----EEMVEMLQIAMSCVVRMPDQRPKMPDVVR 592 (625)
Q Consensus 553 d~~~~~~~~~~----~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 592 (625)
.+......... .....+.+++.+||+.||++|||+.|+++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 306 (331)
T 4aaa_A 263 LPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306 (331)
T ss_dssp CCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred CccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 11111101000 12346778888999999999999999985
No 187
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=1.2e-38 Score=335.94 Aligned_cols=256 Identities=18% Similarity=0.247 Sum_probs=196.3
Q ss_pred hHcccCCceeEEEEEE-cCCcEEEEEEeccccCChHHHHHHHHHHHcCC-----------CCceecceeEEEecC----c
Q 006922 330 EVLGKGTFGMAYKAIL-EDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIR-----------HENVVELKAYYYSKD----E 393 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~-----------h~niv~l~~~~~~~~----~ 393 (625)
+.||+|+||+||+|.. .+++.||||++.......+.+.+|++++.+++ ||||+++++++...+ .
T Consensus 25 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 104 (373)
T 1q8y_A 25 RKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVH 104 (373)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETTEEE
T ss_pred EeeeecCCeEEEEEEecCCCcEEEEEEecCCccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhccCCCCce
Confidence 5699999999999995 57899999999865544567889999988876 899999999998654 6
Q ss_pred eEEEEEeccCCChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhc-CCCCceecCCCCCCEEeC------CCCCe
Q 006922 394 KLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAA-NGGKLVHGNIKSSNIFLN------SQQYG 466 (625)
Q Consensus 394 ~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~-~~~~ivHrDlk~~NIll~------~~~~~ 466 (625)
.++||||+ +++|.+++..... ..+++..+..++.|++.||+|||++ + |+||||||+|||++ ..+.+
T Consensus 105 ~~lv~e~~-~~~L~~~~~~~~~---~~~~~~~~~~i~~qi~~aL~~lH~~~~---ivH~Dikp~NIll~~~~~~~~~~~~ 177 (373)
T 1q8y_A 105 VVMVFEVL-GENLLALIKKYEH---RGIPLIYVKQISKQLLLGLDYMHRRCG---IIHTDIKPENVLMEIVDSPENLIQI 177 (373)
T ss_dssp EEEEECCC-CEEHHHHHHHTTT---SCCCHHHHHHHHHHHHHHHHHHHHTTC---EECSCCSGGGEEEEEEETTTTEEEE
T ss_pred EEEEEecC-CCCHHHHHHHhhc---cCCcHHHHHHHHHHHHHHHHHHHhcCC---EEecCCChHHeEEeccCCCcCcceE
Confidence 89999999 8899999976432 2489999999999999999999998 7 99999999999994 44579
Q ss_pred eEecccccccccccccccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHH---HHHHh
Q 006922 467 CVSDLGLTTITSALAPVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRW---VHSVV 543 (625)
Q Consensus 467 kl~DfGla~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~---~~~~~ 543 (625)
||+|||+++..........+|..|+|||++.+..++.++|||||||++|||+||+.||.............. +....
T Consensus 178 kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 257 (373)
T 1q8y_A 178 KIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELL 257 (373)
T ss_dssp EECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHH
T ss_pred EEcccccccccCCCCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHHhc
Confidence 999999998876655566789999999999999999999999999999999999999986543221111111 11111
Q ss_pred hcc---------cccccccc------------------cccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006922 544 REE---------WTAEVFDV------------------ELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR 592 (625)
Q Consensus 544 ~~~---------~~~~~~d~------------------~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 592 (625)
..- .....++. .............++.+++.+||+.||++|||+.|+++
T Consensus 258 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 333 (373)
T 1q8y_A 258 GELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVN 333 (373)
T ss_dssp CSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHT
T ss_pred CCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhh
Confidence 000 00000000 00111234556778889999999999999999999987
No 188
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=2e-38 Score=322.50 Aligned_cols=241 Identities=22% Similarity=0.410 Sum_probs=191.5
Q ss_pred hHcccCCceeEEEEEEc-CCcEEEEEEeccccCC---hHHHHHHHHHHHcCCCCceecceeEEEec----CceEEEEEec
Q 006922 330 EVLGKGTFGMAYKAILE-DGTTVVVKRLKDVNVG---KRDFEQQMEIVGSIRHENVVELKAYYYSK----DEKLMVYDYY 401 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~~----~~~~lv~e~~ 401 (625)
+.||+|+||+||+|... ++..||+|++...... .+.+.+|++++.+++||||+++++++... ...++||||+
T Consensus 32 ~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~ 111 (290)
T 1t4h_A 32 IEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELM 111 (290)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEECC
T ss_pred eeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEEEEec
Confidence 46999999999999964 6889999999865433 35688999999999999999999998763 4579999999
Q ss_pred cCCChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeC-CCCCeeEeccccccccccc
Q 006922 402 SLGSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLN-SQQYGCVSDLGLTTITSAL 480 (625)
Q Consensus 402 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~-~~~~~kl~DfGla~~~~~~ 480 (625)
++++|.+++.... .+++..+..++.|++.||+|||+.+ ++|+||||||+||+++ .++.+||+|||++......
T Consensus 112 ~~~~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~-~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~~ 185 (290)
T 1t4h_A 112 TSGTLKTYLKRFK-----VMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS 185 (290)
T ss_dssp CSCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTT
T ss_pred CCCCHHHHHHHcc-----CCCHHHHHHHHHHHHHHHHHHHcCC-CCEEECCCCHHHEEEECCCCCEEEeeCCCccccccc
Confidence 9999999997643 3899999999999999999999874 3599999999999998 7899999999999765433
Q ss_pred -ccccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccccccccccCC
Q 006922 481 -APVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRY 559 (625)
Q Consensus 481 -~~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 559 (625)
.....++..|+|||.+.+ .++.++||||+|+++|||++|+.||....... .... .. ........++ .
T Consensus 186 ~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~--~~~~---~~-~~~~~~~~~~----~- 253 (290)
T 1t4h_A 186 FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAA--QIYR---RV-TSGVKPASFD----K- 253 (290)
T ss_dssp SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHH--HHHH---HH-TTTCCCGGGG----G-
T ss_pred ccccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcCcHH--HHHH---HH-hccCCccccC----C-
Confidence 234568889999998874 58999999999999999999999997643221 1111 11 1111110000 0
Q ss_pred CCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006922 560 PNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR 592 (625)
Q Consensus 560 ~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 592 (625)
....++.+++..||+.||.+|||+.|+++
T Consensus 254 ----~~~~~l~~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 254 ----VAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp ----CCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ----CCCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 01135778888999999999999999985
No 189
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=9.7e-40 Score=344.50 Aligned_cols=245 Identities=10% Similarity=0.018 Sum_probs=176.0
Q ss_pred hHcccCCceeEEEEEEc-CCcEEEEEEeccccCC----hHHHHHHH---HHHHcCCCCceecce-------eEEEecC--
Q 006922 330 EVLGKGTFGMAYKAILE-DGTTVVVKRLKDVNVG----KRDFEQQM---EIVGSIRHENVVELK-------AYYYSKD-- 392 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~----~~~~~~e~---~~l~~l~h~niv~l~-------~~~~~~~-- 392 (625)
+.||+|+||+||+|... +|+.||||+++..... .+.+.+|+ +++.. +||||++++ +++...+
T Consensus 68 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~~~~~~~~ 146 (371)
T 3q60_A 68 EPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDAVAVQSQP 146 (371)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEEEEETTSC
T ss_pred eeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehheecCCCC
Confidence 57999999999999954 7899999999875432 24567774 45555 799977754 5554332
Q ss_pred ---------------ceEEEEEeccCCChhhhhccccCCCCccCCHHHH------HHHHHHHHHHHHHHHhcCCCCceec
Q 006922 393 ---------------EKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTR------MRIAIGAARGIARIHAANGGKLVHG 451 (625)
Q Consensus 393 ---------------~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~------~~i~~~ia~~l~~LH~~~~~~ivHr 451 (625)
..++||||++ |+|.+++..... .+.+..+ ..++.|+++||+|||+++ |+||
T Consensus 147 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~----~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~---ivHr 218 (371)
T 3q60_A 147 PFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDF----VYVFRGDEGILALHILTAQLIRLAANLQSKG---LVHG 218 (371)
T ss_dssp SSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHH----SCCCCHHHHHHHHHHHHHHHHHHHHHHHHTT---EEET
T ss_pred CeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhcc----ccchhhhhhhhhHHHHHHHHHHHHHHHHHCC---CccC
Confidence 3799999999 899999986522 2445555 778899999999999998 9999
Q ss_pred CCCCCCEEeCCCCCeeEecccccccccccccccccCCCcCCccccCC--CCCCCccchhhhHHHHHHHHhCCCCCCCCCC
Q 006922 452 NIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVTDS--RKATQASDVYSFGVVLLEILTGKSPIHTTGG 529 (625)
Q Consensus 452 Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~DvwS~Gvil~elltG~~p~~~~~~ 529 (625)
||||+|||++.++.+||+|||+++..........++..|+|||++.+ ..++.++|||||||++|||+||+.||.....
T Consensus 219 Dikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~ 298 (371)
T 3q60_A 219 HFTPDNLFIMPDGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTP 298 (371)
T ss_dssp TCSGGGEEECTTSCEEECCGGGEEETTCEEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCT
T ss_pred cCCHHHEEECCCCCEEEEecceeeecCCCccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCc
Confidence 99999999999999999999999987655544566788999999987 6799999999999999999999999986543
Q ss_pred cchhhHHHHHHHHhhcccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006922 530 DELVHLVRWVHSVVREEWTAEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR 592 (625)
Q Consensus 530 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 592 (625)
...... ............ ...+........+.+++.+||+.||++|||+.|+++
T Consensus 299 ~~~~~~--------~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 299 GIKGSW--------KRPSLRVPGTDS-LAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp TCTTCC--------CBCCTTSCCCCS-CCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred ccccch--------hhhhhhhccccc-cchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 211100 000000000000 001111122346677888999999999999999974
No 190
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=1.5e-38 Score=329.55 Aligned_cols=243 Identities=21% Similarity=0.320 Sum_probs=194.3
Q ss_pred hHcccCCceeEEEEEEc-CCcEEEEEEeccccC---ChHHHHHHHHHHHcCC-CCceecceeEEEecCceEEEEEeccCC
Q 006922 330 EVLGKGTFGMAYKAILE-DGTTVVVKRLKDVNV---GKRDFEQQMEIVGSIR-HENVVELKAYYYSKDEKLMVYDYYSLG 404 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~---~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~~g 404 (625)
+.||+|+||+||+|... +|+.||+|+++.... ....+.+|+.++.+++ ||||+++++++...+..++||||+++|
T Consensus 35 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv~e~~~~~ 114 (327)
T 3lm5_A 35 KELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGG 114 (327)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCTTE
T ss_pred ceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEEEEecCCC
Confidence 67999999999999965 699999999986432 2467899999999994 699999999999999999999999999
Q ss_pred ChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCC---CCCeeEecccccccccccc
Q 006922 405 SVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNS---QQYGCVSDLGLTTITSALA 481 (625)
Q Consensus 405 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~---~~~~kl~DfGla~~~~~~~ 481 (625)
+|.+++.... ...+++..+..++.|++.||+|||+.+ |+||||||+|||++. ++.+||+|||+++......
T Consensus 115 ~L~~~~~~~~---~~~~~~~~~~~i~~ql~~~L~~LH~~g---ivH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~ 188 (327)
T 3lm5_A 115 EIFSLCLPEL---AEMVSENDVIRLIKQILEGVYYLHQNN---IVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHAC 188 (327)
T ss_dssp EGGGGGSSCC----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESCBTTBCCEEECCGGGCEEC----
T ss_pred cHHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHCC---eecCcCChHHEEEecCCCCCcEEEeeCccccccCCcc
Confidence 9999986532 234899999999999999999999998 999999999999998 7899999999998765332
Q ss_pred --cccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccccccccccCC
Q 006922 482 --PVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRY 559 (625)
Q Consensus 482 --~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 559 (625)
....++..|+|||++.+..++.++||||||+++|||++|+.||......+....+. .. . .+...
T Consensus 189 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~---~~---~-----~~~~~--- 254 (327)
T 3lm5_A 189 ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNIS---QV---N-----VDYSE--- 254 (327)
T ss_dssp -----CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH---HT---C-----CCCCT---
T ss_pred ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHH---hc---c-----cccCc---
Confidence 23468889999999999999999999999999999999999997654332221111 10 0 00000
Q ss_pred CCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006922 560 PNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR 592 (625)
Q Consensus 560 ~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 592 (625)
+........+.+++.+||+.||.+|||++|+++
T Consensus 255 ~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~ 287 (327)
T 3lm5_A 255 ETFSSVSQLATDFIQSLLVKNPEKRPTAEICLS 287 (327)
T ss_dssp TTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hhhcccCHHHHHHHHHHcCCChhhCcCHHHHhC
Confidence 111122345677888999999999999999986
No 191
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=1.4e-38 Score=348.59 Aligned_cols=239 Identities=19% Similarity=0.326 Sum_probs=194.1
Q ss_pred hHcccCCceeEEEEEEc-CCcEEEEEEecccc----CChHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccCC
Q 006922 330 EVLGKGTFGMAYKAILE-DGTTVVVKRLKDVN----VGKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLG 404 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 404 (625)
++||+|+||+||+++.. +|+.||+|+++... .....+.+|++++.+++||||+++++++...+..++||||+++|
T Consensus 191 ~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmE~~~gg 270 (543)
T 3c4z_A 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGG 270 (543)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTC
T ss_pred EEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEEEeccCC
Confidence 46999999999999965 69999999997542 23356889999999999999999999999999999999999999
Q ss_pred ChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEecccccccccccc---
Q 006922 405 SVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALA--- 481 (625)
Q Consensus 405 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~--- 481 (625)
+|..++..... ....+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 271 ~L~~~l~~~~~-~~~~l~e~~~~~~~~qi~~aL~~LH~~g---IvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~~~~ 346 (543)
T 3c4z_A 271 DIRYHIYNVDE-DNPGFQEPRAIFYTAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKT 346 (543)
T ss_dssp BHHHHHHTSST-TSCSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCTTCEECCTTCCCB
T ss_pred CHHHHHHHhhc-ccccccHHHHHHHHHHHHHHHHHHHHcC---CcccCCChHHEEEeCCCCEEEeecceeeeccCCCccc
Confidence 99999876432 2335899999999999999999999998 9999999999999999999999999998764332
Q ss_pred cccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcch-hhHHHHHHHHhhcccccccccccccCCC
Q 006922 482 PVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDEL-VHLVRWVHSVVREEWTAEVFDVELLRYP 560 (625)
Q Consensus 482 ~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 560 (625)
....||+.|+|||++.+..++.++|||||||++|||++|+.||........ ..+.+ ...... . ..+
T Consensus 347 ~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~---~i~~~~---------~-~~p 413 (543)
T 3c4z_A 347 KGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQ---RVLEQA---------V-TYP 413 (543)
T ss_dssp CCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHH---HHHHCC---------C-CCC
T ss_pred ccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHH---HHhhcc---------c-CCC
Confidence 234789999999999999999999999999999999999999986543211 11111 111110 0 011
Q ss_pred CcHHHHHHHHHHHHHccCCCCCCCCCH
Q 006922 561 NIEEEMVEMLQIAMSCVVRMPDQRPKM 587 (625)
Q Consensus 561 ~~~~~~~~l~~l~~~Cl~~~P~~RPs~ 587 (625)
......+.+++.+|++.||.+||++
T Consensus 414 --~~~s~~~~~li~~lL~~dP~~R~~~ 438 (543)
T 3c4z_A 414 --DKFSPASKDFCEALLQKDPEKRLGF 438 (543)
T ss_dssp --TTSCHHHHHHHHHHSCSSGGGSCCC
T ss_pred --cccCHHHHHHHHHhccCCHhHCCCC
Confidence 1122356677889999999999976
No 192
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=4.8e-39 Score=338.26 Aligned_cols=250 Identities=22% Similarity=0.323 Sum_probs=175.2
Q ss_pred hHcccCCceeEEEEEE-cCCcEEEEEEeccccCC---hHHHHHHHHHHHcCCCCceecceeEEEec------CceEEEEE
Q 006922 330 EVLGKGTFGMAYKAIL-EDGTTVVVKRLKDVNVG---KRDFEQQMEIVGSIRHENVVELKAYYYSK------DEKLMVYD 399 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~~~~lv~e 399 (625)
+.||+|+||+||+|.. .+|+.||||++...... .+.+.+|++++..++||||+++++++... ...++|+|
T Consensus 35 ~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~~lv~e 114 (367)
T 2fst_X 35 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTH 114 (367)
T ss_dssp EECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEEEE
T ss_pred eEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCeEEEEec
Confidence 5799999999999995 46899999999764332 35678999999999999999999999754 56799999
Q ss_pred eccCCChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEecccccccccc
Q 006922 400 YYSLGSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSA 479 (625)
Q Consensus 400 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~ 479 (625)
|+ +++|.+++... .+++..+..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 115 ~~-~~~L~~~~~~~------~l~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~ 184 (367)
T 2fst_X 115 LM-GADLNNIVKCQ------KLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTAD 184 (367)
T ss_dssp CC-CEECC-----C------CCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECC---------
T ss_pred cc-CCCHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHhhEEECCCCCEEEeeccccccccc
Confidence 98 67998888642 3899999999999999999999998 99999999999999999999999999988765
Q ss_pred cccccccCCCcCCccccCC-CCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhc---ccccccccc-
Q 006922 480 LAPVIARAAGYRAPEVTDS-RKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVRE---EWTAEVFDV- 554 (625)
Q Consensus 480 ~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~d~- 554 (625)
......+|..|+|||++.+ ..++.++||||+||++|||++|+.||.+.+..+....+ ...... +....+...
T Consensus 185 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i---~~~~g~p~~~~~~~~~~~~ 261 (367)
T 2fst_X 185 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI---LRLVGTPGAELLKKISSES 261 (367)
T ss_dssp ------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH---HHHHCSCCHHHHTTCCCHH
T ss_pred cCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH---HHHhCCCCHHHHHHhhhHH
Confidence 5555678999999999876 67899999999999999999999999765432222111 111110 000000000
Q ss_pred ------cccCCC--CcH----HHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006922 555 ------ELLRYP--NIE----EEMVEMLQIAMSCVVRMPDQRPKMPDVVR 592 (625)
Q Consensus 555 ------~~~~~~--~~~----~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 592 (625)
.+...+ ... .....+.+++.+|+..||.+|||+.|+++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~ 311 (367)
T 2fst_X 262 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 311 (367)
T ss_dssp HHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhc
Confidence 000000 000 11235678888999999999999999986
No 193
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=2.2e-38 Score=324.61 Aligned_cols=242 Identities=20% Similarity=0.332 Sum_probs=195.2
Q ss_pred HhHcccCCceeEEEEEEc-CCcEEEEEEeccccC-ChHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccCCCh
Q 006922 329 AEVLGKGTFGMAYKAILE-DGTTVVVKRLKDVNV-GKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLGSV 406 (625)
Q Consensus 329 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 406 (625)
.+.||+|+||+||++... +|+.||+|+++.... ..+.+.+|++++.+++||||+++++++...+..++||||+++++|
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 93 (304)
T 2jam_A 14 MEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGEL 93 (304)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred eeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEcCCCccH
Confidence 357999999999999964 799999999986532 345688999999999999999999999999999999999999999
Q ss_pred hhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEe---CCCCCeeEeccccccccccc-cc
Q 006922 407 SAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFL---NSQQYGCVSDLGLTTITSAL-AP 482 (625)
Q Consensus 407 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll---~~~~~~kl~DfGla~~~~~~-~~ 482 (625)
.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+||++ +.++.+||+|||+++..... ..
T Consensus 94 ~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~ 165 (304)
T 2jam_A 94 FDRILERG-----VYTEKDASLVIQQVLSAVKYLHENG---IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMS 165 (304)
T ss_dssp HHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHTT---CCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCBTTH
T ss_pred HHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEecCCCCCCEEEccCCcceecCCCccc
Confidence 99987543 3899999999999999999999998 9999999999999 78899999999999765432 22
Q ss_pred ccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccccccccccCCCCc
Q 006922 483 VIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNI 562 (625)
Q Consensus 483 ~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 562 (625)
...++..|+|||.+.+..++.++||||+|+++|||++|+.||......+.. ..+. .... ... .+..
T Consensus 166 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~---~~i~----~~~~----~~~---~~~~ 231 (304)
T 2jam_A 166 TACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLF---EKIK----EGYY----EFE---SPFW 231 (304)
T ss_dssp HHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH---HHHH----HCCC----CCC---TTTT
T ss_pred cccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHH---HHHH----cCCC----CCC---cccc
Confidence 345888999999999999999999999999999999999999765432221 1111 1100 000 0111
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006922 563 EEEMVEMLQIAMSCVVRMPDQRPKMPDVVR 592 (625)
Q Consensus 563 ~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 592 (625)
.....++.+++.+|+..||++|||+.|+++
T Consensus 232 ~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (304)
T 2jam_A 232 DDISESAKDFICHLLEKDPNERYTCEKALS 261 (304)
T ss_dssp TTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred ccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 112345677888999999999999999986
No 194
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=2e-38 Score=326.31 Aligned_cols=241 Identities=22% Similarity=0.371 Sum_probs=193.1
Q ss_pred HhHcccCCceeEEEEEEc-CCcEEEEEEeccccCChHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccCCChh
Q 006922 329 AEVLGKGTFGMAYKAILE-DGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLGSVS 407 (625)
Q Consensus 329 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~ 407 (625)
.+.||+|+||.||+|... +|+.||+|++.... ..+.+.+|++++.+++||||+++++++...+..++||||+++++|.
T Consensus 34 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 112 (314)
T 3com_A 34 LEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES-DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVS 112 (314)
T ss_dssp EEECC----CEEEEEEETTTCCEEEEEEEETTS-CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTEEHH
T ss_pred heeeccCCCeEEEEEEECCCCCEEEEEecCchH-HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeecCCCCCHH
Confidence 357999999999999965 58999999997643 3467899999999999999999999999999999999999999999
Q ss_pred hhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEeccccccccccc---cccc
Q 006922 408 AMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSAL---APVI 484 (625)
Q Consensus 408 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~---~~~~ 484 (625)
+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++...... ....
T Consensus 113 ~~~~~~~----~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~ 185 (314)
T 3com_A 113 DIIRLRN----KTLTEDEIATILQSTLKGLEYLHFMR---KIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTV 185 (314)
T ss_dssp HHHHHHT----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECBTTBSCBCCC
T ss_pred HHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHhCC---CcCCCcCHHHEEECCCCCEEEeecccchhhhhhccccCcc
Confidence 9987432 24899999999999999999999998 999999999999999999999999999766432 2234
Q ss_pred ccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccccccccccCCCCcHH
Q 006922 485 ARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIEE 564 (625)
Q Consensus 485 ~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 564 (625)
.++..|+|||.+.+..++.++||||||+++|||++|+.||......+.. ... ........ .....
T Consensus 186 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~---~~~----~~~~~~~~--------~~~~~ 250 (314)
T 3com_A 186 IGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAI---FMI----PTNPPPTF--------RKPEL 250 (314)
T ss_dssp CSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHH---HHH----HHSCCCCC--------SSGGG
T ss_pred CCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHH---HHH----hcCCCccc--------CCccc
Confidence 6788899999999989999999999999999999999999764322111 111 11110000 01111
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006922 565 EMVEMLQIAMSCVVRMPDQRPKMPDVVR 592 (625)
Q Consensus 565 ~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 592 (625)
....+.+++.+||..||.+|||+.|+++
T Consensus 251 ~~~~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 251 WSDNFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp SCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred CCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 2346778888999999999999999986
No 195
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=2e-38 Score=319.93 Aligned_cols=237 Identities=22% Similarity=0.309 Sum_probs=188.4
Q ss_pred hHcccCCceeEEEEEEc-CCcEEEEEEecccc----CChHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccCC
Q 006922 330 EVLGKGTFGMAYKAILE-DGTTVVVKRLKDVN----VGKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLG 404 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 404 (625)
+.||+|+||.||+|... +|+.||+|++.... ...+.+.+|++++..++||||+++++++...+..++||||++++
T Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 96 (276)
T 2h6d_A 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGG 96 (276)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCCSC
T ss_pred eeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEEeccCCC
Confidence 56999999999999965 79999999997532 22457889999999999999999999999999999999999999
Q ss_pred ChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEecccccccccccc--c
Q 006922 405 SVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALA--P 482 (625)
Q Consensus 405 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~--~ 482 (625)
+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++....... .
T Consensus 97 ~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~ 168 (276)
T 2h6d_A 97 ELFDYICKHG-----RVEEMEARRLFQQILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLR 168 (276)
T ss_dssp BHHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHHHC---SSCCCCCGGGEEECTTSCEEECCCCGGGCCCC-----
T ss_pred cHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCChhhEEECCCCCEEEeecccccccCCCccee
Confidence 9999997643 3899999999999999999999998 9999999999999999999999999998765332 2
Q ss_pred ccccCCCcCCccccCCCCC-CCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccccccccccCCCC
Q 006922 483 VIARAAGYRAPEVTDSRKA-TQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPN 561 (625)
Q Consensus 483 ~~~~~~~y~aPE~~~~~~~-~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 561 (625)
...++..|+|||.+.+..+ +.++||||||+++|||++|+.||......+. .+.+. .... ..+
T Consensus 169 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~---~~~~~----~~~~---------~~~- 231 (276)
T 2h6d_A 169 TSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTL---FKKIR----GGVF---------YIP- 231 (276)
T ss_dssp --------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH---HHHHH----HCCC---------CCC-
T ss_pred cccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHH---HHHhh----cCcc---------cCc-
Confidence 3457888999999987765 6899999999999999999999975432221 11111 1100 001
Q ss_pred cHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006922 562 IEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR 592 (625)
Q Consensus 562 ~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 592 (625)
......+.+++.+|++.||.+|||+.|+++
T Consensus 232 -~~~~~~l~~li~~~l~~~p~~Rps~~~~l~ 261 (276)
T 2h6d_A 232 -EYLNRSVATLLMHMLQVDPLKRATIKDIRE 261 (276)
T ss_dssp -TTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred -hhcCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence 111235677888999999999999999987
No 196
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=1.3e-38 Score=359.95 Aligned_cols=238 Identities=20% Similarity=0.300 Sum_probs=195.7
Q ss_pred HhHcccCCceeEEEEEEc-CCcEEEEEEeccc----cCChHHHHHHHHHHHcC-CCCceecceeEEEecCceEEEEEecc
Q 006922 329 AEVLGKGTFGMAYKAILE-DGTTVVVKRLKDV----NVGKRDFEQQMEIVGSI-RHENVVELKAYYYSKDEKLMVYDYYS 402 (625)
Q Consensus 329 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~----~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~ 402 (625)
.++||+|+||+||+|... +++.||||+++.. ....+.+..|.+++..+ +||+|+.+++++.+.+..++||||++
T Consensus 346 ~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~lV~E~~~ 425 (674)
T 3pfq_A 346 LMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVN 425 (674)
T ss_dssp EEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEEEEECCC
T ss_pred EEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEEEEeCcC
Confidence 357999999999999964 6889999999753 22345678899999988 79999999999999999999999999
Q ss_pred CCChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEeccccccccc---c
Q 006922 403 LGSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITS---A 479 (625)
Q Consensus 403 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~---~ 479 (625)
+|+|..++.... .+++..+..++.||+.||+|||+.+ |+||||||+|||++.++++||+|||+++... .
T Consensus 426 gg~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~g---IiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~ 497 (674)
T 3pfq_A 426 GGDLMYHIQQVG-----RFKEPHAVFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV 497 (674)
T ss_dssp SCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTS---EECCCCCSTTEEECSSSCEEECCCTTCEECCCTTC
T ss_pred CCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhCC---eEeccCChhhEEEcCCCcEEEeecceeeccccCCc
Confidence 999999998653 3899999999999999999999998 9999999999999999999999999998642 2
Q ss_pred cccccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccccccccccCC
Q 006922 480 LAPVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRY 559 (625)
Q Consensus 480 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 559 (625)
......||+.|+|||++.+..|+.++|||||||++|||++|+.||...+..+....+ .... . ..
T Consensus 498 ~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i------~~~~---------~-~~ 561 (674)
T 3pfq_A 498 TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSI------MEHN---------V-AY 561 (674)
T ss_dssp CBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH------HSSC---------C-CC
T ss_pred ccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHHHH------HhCC---------C-CC
Confidence 233457899999999999999999999999999999999999999865433322211 1111 0 01
Q ss_pred CCcHHHHHHHHHHHHHccCCCCCCCCCH-----HHHHH
Q 006922 560 PNIEEEMVEMLQIAMSCVVRMPDQRPKM-----PDVVR 592 (625)
Q Consensus 560 ~~~~~~~~~l~~l~~~Cl~~~P~~RPs~-----~ev~~ 592 (625)
......++.+++..||+.||++||++ +||++
T Consensus 562 --p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~ 597 (674)
T 3pfq_A 562 --PKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 597 (674)
T ss_dssp --CTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred --CccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence 11123456778889999999999998 66653
No 197
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=9.6e-39 Score=333.61 Aligned_cols=254 Identities=17% Similarity=0.286 Sum_probs=191.9
Q ss_pred HhHcccCCceeEEEEEEc-CCcEEEEEEeccccCC------hHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEec
Q 006922 329 AEVLGKGTFGMAYKAILE-DGTTVVVKRLKDVNVG------KRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYY 401 (625)
Q Consensus 329 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~------~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 401 (625)
.+.||+|+||+||+|... +|+.||||+++..... .+.+.+|++++.+++||||+++++++...+..++||||+
T Consensus 15 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 94 (346)
T 1ua2_A 15 LDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFM 94 (346)
T ss_dssp EEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEECC
T ss_pred EeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceEEEEEcC
Confidence 357999999999999964 6899999999753221 246889999999999999999999999999999999999
Q ss_pred cCCChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEeccccccccccc-
Q 006922 402 SLGSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSAL- 480 (625)
Q Consensus 402 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~- 480 (625)
++ +|..++.... ..+++..+..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 95 ~~-~l~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~ 166 (346)
T 1ua2_A 95 ET-DLEVIIKDNS----LVLTPSHIKAYMLMTLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPN 166 (346)
T ss_dssp SE-EHHHHHTTCC----SSCCSSHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCC
T ss_pred CC-CHHHHHHhcC----cCCCHHHHHHHHHHHHHHHHHHHHCC---EECCCCCHHHEEEcCCCCEEEEecccceeccCCc
Confidence 86 8888886542 24888899999999999999999998 999999999999999999999999999876432
Q ss_pred --ccccccCCCcCCccccCC-CCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhc---ccccccc--
Q 006922 481 --APVIARAAGYRAPEVTDS-RKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVRE---EWTAEVF-- 552 (625)
Q Consensus 481 --~~~~~~~~~y~aPE~~~~-~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-- 552 (625)
.....+|..|+|||.+.+ ..++.++|||||||++|||++|.+||......+.. ..+...... ..+....
T Consensus 167 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~---~~i~~~~~~~~~~~~~~~~~~ 243 (346)
T 1ua2_A 167 RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQL---TRIFETLGTPTEEQWPDMCSL 243 (346)
T ss_dssp CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH---HHHHHHHCCCCTTTSSSTTSS
T ss_pred ccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHH---HHHHHHcCCCChhhhhhhccC
Confidence 233467889999999865 45899999999999999999999999765432221 111111111 0001000
Q ss_pred -ccc-ccCCCC-c-----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006922 553 -DVE-LLRYPN-I-----EEEMVEMLQIAMSCVVRMPDQRPKMPDVVRV 593 (625)
Q Consensus 553 -d~~-~~~~~~-~-----~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 593 (625)
+.. ....+. . .....++.+++.+|+..||++|||+.|+++.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 244 PDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp TTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred cccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 000 000000 0 1112467788889999999999999999874
No 198
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=1.4e-38 Score=324.12 Aligned_cols=243 Identities=22% Similarity=0.376 Sum_probs=193.0
Q ss_pred hHcccCCceeEEEEEE-cCCcEEEEEEeccccC-ChHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccCCChh
Q 006922 330 EVLGKGTFGMAYKAIL-EDGTTVVVKRLKDVNV-GKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLGSVS 407 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~ 407 (625)
.+||+|+||+||+|.. .+++.||+|++..... ..+.+.+|+.++..++||||+++++++...+..++||||+++++|.
T Consensus 28 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 107 (295)
T 2clq_A 28 VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLS 107 (295)
T ss_dssp CEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSEEEHH
T ss_pred EEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCCCCHH
Confidence 3699999999999995 4689999999976533 3467899999999999999999999999999999999999999999
Q ss_pred hhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCC-CCCeeEeccccccccccc---ccc
Q 006922 408 AMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNS-QQYGCVSDLGLTTITSAL---APV 483 (625)
Q Consensus 408 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~-~~~~kl~DfGla~~~~~~---~~~ 483 (625)
+++..... ...+++..+..++.|+++||+|||+.+ |+||||||+||+++. ++.+||+|||+++..... ...
T Consensus 108 ~~l~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 182 (295)
T 2clq_A 108 ALLRSKWG--PLKDNEQTIGFYTKQILEGLKYLHDNQ---IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTET 182 (295)
T ss_dssp HHHHHTTC--CCTTCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTCCEEECCTTTCEESCC-----CC
T ss_pred HHHHhhcc--CCCccHHHHHHHHHHHHHHHHHHHhCC---EEccCCChhhEEEECCCCCEEEeecccccccCCCCCcccc
Confidence 99976532 234678999999999999999999998 999999999999987 899999999999876432 233
Q ss_pred cccCCCcCCccccCCC--CCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccccccccccCCCC
Q 006922 484 IARAAGYRAPEVTDSR--KATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPN 561 (625)
Q Consensus 484 ~~~~~~y~aPE~~~~~--~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 561 (625)
..++..|+|||.+.+. .++.++||||||+++|||++|+.||......... ... ..... ..+..
T Consensus 183 ~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~-~~~---~~~~~------~~~~~----- 247 (295)
T 2clq_A 183 FTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAA-MFK---VGMFK------VHPEI----- 247 (295)
T ss_dssp CCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHH-HHH---HHHHC------CCCCC-----
T ss_pred cCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHH-HHh---hcccc------ccccc-----
Confidence 4678889999998654 3789999999999999999999999754322111 111 00000 00000
Q ss_pred cHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006922 562 IEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR 592 (625)
Q Consensus 562 ~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 592 (625)
......++.+++.+||+.||++||++.|+++
T Consensus 248 ~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 248 PESMSAEAKAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp CTTSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred cccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 1112235677888999999999999999975
No 199
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=1.8e-38 Score=336.14 Aligned_cols=195 Identities=19% Similarity=0.283 Sum_probs=166.9
Q ss_pred hHcccCCceeEEEEEEc-CCcEEEEEEeccccCChHHHHHHHHHHHcCC-CC-----ceecceeEEEecCceEEEEEecc
Q 006922 330 EVLGKGTFGMAYKAILE-DGTTVVVKRLKDVNVGKRDFEQQMEIVGSIR-HE-----NVVELKAYYYSKDEKLMVYDYYS 402 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~-h~-----niv~l~~~~~~~~~~~lv~e~~~ 402 (625)
+.||+|+||+||+|... +++.||||+++........+..|++++..++ |+ +|+++++++...+..++||||++
T Consensus 60 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~ 139 (382)
T 2vx3_A 60 SLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLS 139 (382)
T ss_dssp EEEEEETTEEEEEEEETTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEEEEEEECCC
T ss_pred EEEeecCCEEEEEEEEcCCCcEEEEEEEeccHHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCceEEEEecCC
Confidence 57999999999999954 6889999999865444466778888888774 44 49999999999999999999996
Q ss_pred CCChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeC--CCCCeeEeccccccccccc
Q 006922 403 LGSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLN--SQQYGCVSDLGLTTITSAL 480 (625)
Q Consensus 403 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~--~~~~~kl~DfGla~~~~~~ 480 (625)
|+|.+++..... ..+++..+..++.|++.||+|||++ ..+|+||||||+|||++ .++.+||+|||+++.....
T Consensus 140 -~~L~~~l~~~~~---~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~~~~~ 214 (382)
T 2vx3_A 140 -YNLYDLLRNTNF---RGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQR 214 (382)
T ss_dssp -CBHHHHHHHTTT---SCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECCCTTCEETTCC
T ss_pred -CCHHHHHhhcCc---CCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEeccCceecccc
Confidence 499999876532 2489999999999999999999952 12399999999999995 4778999999999887665
Q ss_pred ccccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCC
Q 006922 481 APVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGG 529 (625)
Q Consensus 481 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~ 529 (625)
.....+|..|+|||++.+..++.++|||||||++|||+||+.||.....
T Consensus 215 ~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~ 263 (382)
T 2vx3_A 215 IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANE 263 (382)
T ss_dssp CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH
Confidence 5666789999999999999999999999999999999999999986543
No 200
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=2.2e-38 Score=346.18 Aligned_cols=246 Identities=22% Similarity=0.308 Sum_probs=197.3
Q ss_pred HhHcccCCceeEEEEEEc-CCcEEEEEEeccc---cCChHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccCC
Q 006922 329 AEVLGKGTFGMAYKAILE-DGTTVVVKRLKDV---NVGKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLG 404 (625)
Q Consensus 329 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 404 (625)
.+.||+|+||+||++... +|+.||||++... ......+.+|++++.+++||||+++++++.+.+..++||||+++|
T Consensus 27 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~ 106 (486)
T 3mwu_A 27 VCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGG 106 (486)
T ss_dssp EEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred eEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEEcCCCC
Confidence 467999999999999964 7899999999643 234567899999999999999999999999999999999999999
Q ss_pred ChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeC---CCCCeeEeccccccccccc-
Q 006922 405 SVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLN---SQQYGCVSDLGLTTITSAL- 480 (625)
Q Consensus 405 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~---~~~~~kl~DfGla~~~~~~- 480 (625)
+|.+.+.... .+++..+..++.|++.||+|||+.+ |+||||||+|||++ .++.+||+|||+++.....
T Consensus 107 ~L~~~~~~~~-----~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~ 178 (486)
T 3mwu_A 107 ELFDEIIKRK-----RFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT 178 (486)
T ss_dssp BHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC-
T ss_pred cHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCchHHEEEecCCCCCCEEEEECCcCeECCCCC
Confidence 9999887643 3899999999999999999999998 99999999999995 4567999999999876433
Q ss_pred -ccccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccccccccccCC
Q 006922 481 -APVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRY 559 (625)
Q Consensus 481 -~~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 559 (625)
.....||+.|+|||++.+ .++.++||||+||++|||++|+.||......+....+ . ..... ...
T Consensus 179 ~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i---~---~~~~~-----~~~--- 243 (486)
T 3mwu_A 179 KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRV---E---TGKYA-----FDL--- 243 (486)
T ss_dssp ---CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH---H---HTCCC-----SCS---
T ss_pred ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH---H---hCCCC-----CCC---
Confidence 233468889999999876 5899999999999999999999999765433322211 1 11100 000
Q ss_pred CCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH--HHhh
Q 006922 560 PNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRV--IENV 597 (625)
Q Consensus 560 ~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~--L~~~ 597 (625)
+.......++.+++.+||+.||.+|||+.|+++. ++..
T Consensus 244 ~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~hp~~~~~ 283 (486)
T 3mwu_A 244 PQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKY 283 (486)
T ss_dssp GGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHCHHHHHT
T ss_pred cccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCHhhccC
Confidence 1111122356778889999999999999999973 4443
No 201
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=3.2e-38 Score=331.97 Aligned_cols=241 Identities=19% Similarity=0.320 Sum_probs=193.6
Q ss_pred hHcccCCceeEEEEEEc-CCcEEEEEEeccccCC---------hHHHHHHHHHHHcC-CCCceecceeEEEecCceEEEE
Q 006922 330 EVLGKGTFGMAYKAILE-DGTTVVVKRLKDVNVG---------KRDFEQQMEIVGSI-RHENVVELKAYYYSKDEKLMVY 398 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~---------~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 398 (625)
+.||+|+||+||+|... +|+.||||+++..... .+.+.+|++++.++ +||||+++++++......++||
T Consensus 100 ~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~ 179 (365)
T 2y7j_A 100 DVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVF 179 (365)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSSEEEEEE
T ss_pred eEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCCEEEEEE
Confidence 57999999999999975 7999999999754311 24578899999999 7999999999999999999999
Q ss_pred EeccCCChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEeccccccccc
Q 006922 399 DYYSLGSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITS 478 (625)
Q Consensus 399 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~ 478 (625)
||+++++|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++....
T Consensus 180 e~~~g~~L~~~l~~~~-----~l~~~~~~~i~~qi~~~L~~LH~~g---i~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~~ 251 (365)
T 2y7j_A 180 DLMRKGELFDYLTEKV-----ALSEKETRSIMRSLLEAVSFLHANN---IVHRDLKPENILLDDNMQIRLSDFGFSCHLE 251 (365)
T ss_dssp CCCTTCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred EeCCCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEEEecCcccccC
Confidence 9999999999997543 4899999999999999999999998 9999999999999999999999999998765
Q ss_pred cc--ccccccCCCcCCccccC------CCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccc
Q 006922 479 AL--APVIARAAGYRAPEVTD------SRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAE 550 (625)
Q Consensus 479 ~~--~~~~~~~~~y~aPE~~~------~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 550 (625)
.. .....||..|+|||++. ...++.++|||||||++|||++|+.||......+ ....+. .... .
T Consensus 252 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~---~~~~i~---~~~~-~- 323 (365)
T 2y7j_A 252 PGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQIL---MLRMIM---EGQY-Q- 323 (365)
T ss_dssp TTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHHHHH---HTCC-C-
T ss_pred CCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHH---HHHHHH---hCCC-C-
Confidence 32 23456888999999885 3358899999999999999999999997643221 111111 1100 0
Q ss_pred cccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006922 551 VFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR 592 (625)
Q Consensus 551 ~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 592 (625)
...+.. . .....+.+++.+|++.||++|||+.|+++
T Consensus 324 ~~~~~~---~---~~~~~~~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 324 FSSPEW---D---DRSSTVKDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp CCHHHH---S---SSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred CCCccc---c---cCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 000000 0 11235778888999999999999999986
No 202
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=3.9e-38 Score=332.14 Aligned_cols=252 Identities=18% Similarity=0.255 Sum_probs=184.4
Q ss_pred hHcccCCceeEEEEEEc-CCcEEEEEEeccccCC---hHHHHHHHHHHHcCCCCceecceeEEEecC------ceEEEEE
Q 006922 330 EVLGKGTFGMAYKAILE-DGTTVVVKRLKDVNVG---KRDFEQQMEIVGSIRHENVVELKAYYYSKD------EKLMVYD 399 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------~~~lv~e 399 (625)
+.||+|+||+||+|... +++.||||++...... .+.+.+|++++..++||||+++++++...+ ..++|||
T Consensus 31 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~lv~e 110 (371)
T 2xrw_A 31 KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 110 (371)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCEEEEEEE
T ss_pred eeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccceEEEEE
Confidence 56999999999999954 6899999999764332 256789999999999999999999997665 6799999
Q ss_pred eccCCChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEecccccccccc
Q 006922 400 YYSLGSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSA 479 (625)
Q Consensus 400 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~ 479 (625)
|+++ +|.+.+.. .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 111 ~~~~-~l~~~~~~-------~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~ 179 (371)
T 2xrw_A 111 LMDA-NLCQVIQM-------ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 179 (371)
T ss_dssp CCSE-EHHHHHHS-------CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECCCCC------
T ss_pred cCCC-CHHHHHhh-------ccCHHHHHHHHHHHHHHHHHHHHCC---eecccCCHHHEEEcCCCCEEEEEeeccccccc
Confidence 9985 77777752 2889999999999999999999998 99999999999999999999999999987643
Q ss_pred c--ccccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHH----------------HHHH
Q 006922 480 L--APVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVR----------------WVHS 541 (625)
Q Consensus 480 ~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~----------------~~~~ 541 (625)
. .....+|..|+|||++.+..++.++|||||||++|||++|+.||.+.+..+....+. .+..
T Consensus 180 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 259 (371)
T 2xrw_A 180 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRT 259 (371)
T ss_dssp ----------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHHHHH
T ss_pred ccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHH
Confidence 2 233468889999999999999999999999999999999999997654322111100 0000
Q ss_pred Hhhcccc------cccccccccCCC--CcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006922 542 VVREEWT------AEVFDVELLRYP--NIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR 592 (625)
Q Consensus 542 ~~~~~~~------~~~~d~~~~~~~--~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 592 (625)
....... ...+........ .......++.+++.+|+..||++|||++|+++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 318 (371)
T 2xrw_A 260 YVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 318 (371)
T ss_dssp HHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhC
Confidence 0000000 000000000000 01122456888999999999999999999987
No 203
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=2e-38 Score=343.97 Aligned_cols=181 Identities=22% Similarity=0.341 Sum_probs=145.7
Q ss_pred hHcccCCceeEEEEEEc-CCcEEEEEEeccccCC---hHHHHHHHHHHHcCCCCceecceeEEEec-----CceEEEEEe
Q 006922 330 EVLGKGTFGMAYKAILE-DGTTVVVKRLKDVNVG---KRDFEQQMEIVGSIRHENVVELKAYYYSK-----DEKLMVYDY 400 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~~~lv~e~ 400 (625)
+.||+|+||+||+|... +|+.||||++...... .+.+.+|++++.+++|||||++++++... +..++||||
T Consensus 59 ~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~ 138 (458)
T 3rp9_A 59 HLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEI 138 (458)
T ss_dssp CC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEECC
T ss_pred eEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceEEEEEec
Confidence 57999999999999854 7899999999764333 35688999999999999999999999543 568999999
Q ss_pred ccCCChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEeccccccccccc
Q 006922 401 YSLGSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSAL 480 (625)
Q Consensus 401 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~ 480 (625)
+. ++|.+++.... .+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 139 ~~-~~L~~~~~~~~-----~l~~~~~~~~~~qi~~aL~~LH~~~---iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~ 209 (458)
T 3rp9_A 139 AD-SDFKKLFRTPV-----YLTELHIKTLLYNLLVGVKYVHSAG---ILHRDLKPANCLVNQDCSVKVCDFGLARTVDYP 209 (458)
T ss_dssp CS-EEHHHHHHSSC-----CCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTCCEEECCCTTCBCTTSC
T ss_pred cc-cchhhhcccCC-----CCCHHHHHHHHHHHHHHHHHHHhCC---cCCCCCChhhEEECCCCCEeecccccchhccCc
Confidence 85 68988887542 4899999999999999999999998 999999999999999999999999999875321
Q ss_pred ------------------------------ccccccCCCcCCcccc-CCCCCCCccchhhhHHHHHHHHh
Q 006922 481 ------------------------------APVIARAAGYRAPEVT-DSRKATQASDVYSFGVVLLEILT 519 (625)
Q Consensus 481 ------------------------------~~~~~~~~~y~aPE~~-~~~~~~~~~DvwS~Gvil~ellt 519 (625)
.....+|..|+|||++ ....++.++|||||||++|||+|
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~ellt 279 (458)
T 3rp9_A 210 ENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLN 279 (458)
T ss_dssp TTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHT
T ss_pred cccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHH
Confidence 1234578889999976 56679999999999999999999
No 204
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=4.2e-39 Score=334.32 Aligned_cols=248 Identities=20% Similarity=0.355 Sum_probs=180.8
Q ss_pred hHcccCCceeEEEEEE-cCCcEEEEEEeccccC-ChHHHHHHHHHHHcCC-CCceecceeEEEe--------cCceEEEE
Q 006922 330 EVLGKGTFGMAYKAIL-EDGTTVVVKRLKDVNV-GKRDFEQQMEIVGSIR-HENVVELKAYYYS--------KDEKLMVY 398 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~e~~~l~~l~-h~niv~l~~~~~~--------~~~~~lv~ 398 (625)
+.||+|+||+||+|.. .+|+.||||++..... ..+.+.+|+.++.++. ||||+++++++.. ....++||
T Consensus 34 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~ 113 (337)
T 3ll6_A 34 RVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLT 113 (337)
T ss_dssp EEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEEEEEEE
T ss_pred EEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCceEEEEE
Confidence 5799999999999995 4789999999865432 2356889999999996 9999999999953 33478999
Q ss_pred EeccCCChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEeccccccccc
Q 006922 399 DYYSLGSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITS 478 (625)
Q Consensus 399 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~ 478 (625)
||+. |+|.+++..... ...+++..+..++.|++.||+|||+.+ ++|+||||||+|||++.++.+||+|||+++...
T Consensus 114 e~~~-g~L~~~l~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~-~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~ 189 (337)
T 3ll6_A 114 ELCK-GQLVEFLKKMES--RGPLSCDTVLKIFYQTCRAVQHMHRQK-PPIIHRDLKVENLLLSNQGTIKLCDFGSATTIS 189 (337)
T ss_dssp ECCS-EEHHHHHHHHHT--TCSCCHHHHHHHHHHHHHHHHHHHTSS-SCCBCCCCCGGGCEECTTSCEEBCCCTTCBCCS
T ss_pred EecC-CCHHHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHhCC-CCEEEccCCcccEEECCCCCEEEecCccceecc
Confidence 9996 699988875432 224899999999999999999999874 349999999999999999999999999998764
Q ss_pred cccc---------------ccccCCCcCCcccc---CCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHH
Q 006922 479 ALAP---------------VIARAAGYRAPEVT---DSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVH 540 (625)
Q Consensus 479 ~~~~---------------~~~~~~~y~aPE~~---~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~ 540 (625)
.... ...++..|+|||++ .+..++.++|||||||++|||++|+.||......+.. .
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~------~ 263 (337)
T 3ll6_A 190 HYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRIV------N 263 (337)
T ss_dssp SCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC----------------
T ss_pred ccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHHhh------c
Confidence 3211 23478889999998 5667899999999999999999999999653321110 0
Q ss_pred HHhhcccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCC
Q 006922 541 SVVREEWTAEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPND 601 (625)
Q Consensus 541 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~ 601 (625)
. . .. .+........+.+++.+||+.||.+||++.|+++.|+.+....
T Consensus 264 ~----~-----~~-----~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~ 310 (337)
T 3ll6_A 264 G----K-----YS-----IPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAAR 310 (337)
T ss_dssp -----------CC-----CCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred C----c-----cc-----CCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhcc
Confidence 0 0 00 0000111124667888999999999999999999999886643
No 205
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=4.9e-38 Score=325.77 Aligned_cols=248 Identities=18% Similarity=0.258 Sum_probs=191.7
Q ss_pred hHcccCCceeEEEEEE-cCCcEEEEEEeccccCChHHHHHHHHHHHcCC-CCceecceeEEEe--cCceEEEEEeccCCC
Q 006922 330 EVLGKGTFGMAYKAIL-EDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIR-HENVVELKAYYYS--KDEKLMVYDYYSLGS 405 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~--~~~~~lv~e~~~~g~ 405 (625)
+.||+|+||+||+|.. .+++.||||+++.. ..+.+.+|++++.+++ ||||+++++++.. ....++||||+++++
T Consensus 42 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~ 119 (330)
T 3nsz_A 42 RKLGRGKYSEVFEAINITNNEKVVVKILKPV--KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTD 119 (330)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECSC--CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEECCCCCC
T ss_pred EEecccCCeEEEEEEECCCCcEEEEEEeccc--chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEeccCchh
Confidence 5799999999999985 57899999999753 3578999999999997 9999999999988 567899999999999
Q ss_pred hhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCC-CeeEeccccccccccc--cc
Q 006922 406 VSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQ-YGCVSDLGLTTITSAL--AP 482 (625)
Q Consensus 406 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~-~~kl~DfGla~~~~~~--~~ 482 (625)
|.+++.. +++..+..++.|++.||+|||+.+ |+||||||+|||++.++ .+||+|||+++..... ..
T Consensus 120 l~~~~~~--------~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~ 188 (330)
T 3nsz_A 120 FKQLYQT--------LTDYDIRFYMYEILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYN 188 (330)
T ss_dssp HHHHGGG--------CCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTTEEEECCCTTCEECCTTCCCC
T ss_pred HHHHHHh--------CCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCCccc
Confidence 9998853 788999999999999999999998 99999999999999777 8999999999876432 23
Q ss_pred ccccCCCcCCccccCC-CCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccccc-------cc
Q 006922 483 VIARAAGYRAPEVTDS-RKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVF-------DV 554 (625)
Q Consensus 483 ~~~~~~~y~aPE~~~~-~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------d~ 554 (625)
...++..|+|||.+.+ ..++.++|||||||++|||++|+.||...... ...+... ..........+.. ++
T Consensus 189 ~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~-~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~ 266 (330)
T 3nsz_A 189 VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN-YDQLVRI-AKVLGTEDLYDYIDKYNIELDP 266 (330)
T ss_dssp SCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSH-HHHHHHH-HHHHCHHHHHHHHHHTTCCCCT
T ss_pred cccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCch-HHHHHHH-HHhcCCchhhhHHHHhcccccc
Confidence 3467788999999876 67899999999999999999999999654322 1111111 1111000000000 00
Q ss_pred ---------------cccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006922 555 ---------------ELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR 592 (625)
Q Consensus 555 ---------------~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 592 (625)
.............++.+++.+|++.||++|||++|+++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~ 319 (330)
T 3nsz_A 267 RFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 319 (330)
T ss_dssp HHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred chhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 00000111112346778888999999999999999986
No 206
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.6e-38 Score=339.30 Aligned_cols=259 Identities=18% Similarity=0.298 Sum_probs=180.2
Q ss_pred HhHcccCCceeEEEEEEc---CCcEEEEEEeccccCChHHHHHHHHHHHcCCCCceecceeEEEe--cCceEEEEEeccC
Q 006922 329 AEVLGKGTFGMAYKAILE---DGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYYS--KDEKLMVYDYYSL 403 (625)
Q Consensus 329 ~~~lg~G~~g~Vy~~~~~---~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~lv~e~~~~ 403 (625)
.++||+|+||+||+|... +++.||||++..... ...+.+|++++.+++||||+++++++.. ....++||||+++
T Consensus 26 g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e~~~~ 104 (405)
T 3rgf_A 26 GCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI-SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEH 104 (405)
T ss_dssp SCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC-CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEECCSE
T ss_pred CcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC-CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEeCCCC
Confidence 457999999999999965 578999999976433 3578899999999999999999999965 5678999999975
Q ss_pred CChhhhhccccC----CCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEe----CCCCCeeEecccccc
Q 006922 404 GSVSAMLHSERG----EGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFL----NSQQYGCVSDLGLTT 475 (625)
Q Consensus 404 g~L~~~l~~~~~----~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll----~~~~~~kl~DfGla~ 475 (625)
+|.+++..... .....+++..+..++.|++.||+|||+.+ |+||||||+|||+ +.++.+||+|||+++
T Consensus 105 -~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~ 180 (405)
T 3rgf_A 105 -DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFAR 180 (405)
T ss_dssp -EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECCSSTTTTCEEECCTTCCC
T ss_pred -CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC---EeCCCcCHHHeEEecCCCCCCcEEEEECCCce
Confidence 77777753321 11224899999999999999999999998 9999999999999 677899999999998
Q ss_pred ccccc------ccccccCCCcCCccccCC-CCCCCccchhhhHHHHHHHHhCCCCCCCCCCcc------hhhHHHHHHHH
Q 006922 476 ITSAL------APVIARAAGYRAPEVTDS-RKATQASDVYSFGVVLLEILTGKSPIHTTGGDE------LVHLVRWVHSV 542 (625)
Q Consensus 476 ~~~~~------~~~~~~~~~y~aPE~~~~-~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~------~~~~~~~~~~~ 542 (625)
..... .....+|..|+|||++.+ ..++.++|||||||++|||++|+.||.....+. ....+..+...
T Consensus 181 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i~~~ 260 (405)
T 3rgf_A 181 LFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNV 260 (405)
T ss_dssp ----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHHHHHH
T ss_pred ecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHHHHHh
Confidence 76432 223567889999999877 458999999999999999999999997654321 01111111111
Q ss_pred hhc---cccccccc------------ccccCCCCcHH--------HHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006922 543 VRE---EWTAEVFD------------VELLRYPNIEE--------EMVEMLQIAMSCVVRMPDQRPKMPDVVR 592 (625)
Q Consensus 543 ~~~---~~~~~~~d------------~~~~~~~~~~~--------~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 592 (625)
+.. ..+..+.. ........... ...++.+++.+||..||.+|||+.|+++
T Consensus 261 ~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~ 333 (405)
T 3rgf_A 261 MGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQ 333 (405)
T ss_dssp HCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 110 00000000 00000000000 0235678888999999999999999987
No 207
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=2.2e-38 Score=331.80 Aligned_cols=252 Identities=20% Similarity=0.276 Sum_probs=188.3
Q ss_pred hHcccCCceeEEEEEEc-CCcEEEEEEeccccCC---hHHHHHHHHHHHcCCCCceecceeEEEecCc------eEEEEE
Q 006922 330 EVLGKGTFGMAYKAILE-DGTTVVVKRLKDVNVG---KRDFEQQMEIVGSIRHENVVELKAYYYSKDE------KLMVYD 399 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~------~~lv~e 399 (625)
+.||+|+||+||+|... +|+.||||++...... .+.+.+|+.++.+++||||+++++++...+. .++|||
T Consensus 30 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e 109 (353)
T 3coi_A 30 THVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMP 109 (353)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEEEE
T ss_pred eeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccceeEEEEec
Confidence 56999999999999964 6999999999765333 2568899999999999999999999987654 499999
Q ss_pred eccCCChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEecccccccccc
Q 006922 400 YYSLGSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSA 479 (625)
Q Consensus 400 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~ 479 (625)
|++ ++|.+++.. .+++..+..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++....
T Consensus 110 ~~~-~~l~~~~~~-------~~~~~~~~~i~~qi~~al~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 178 (353)
T 3coi_A 110 FMQ-TDLQKIMGL-------KFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHADA 178 (353)
T ss_dssp CCS-EEGGGTTTS-------CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECTTCCEEECSTTCTTC---
T ss_pred ccc-CCHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEeECCCCcEEEeecccccCCCC
Confidence 998 588877742 2899999999999999999999998 99999999999999999999999999987765
Q ss_pred cccccccCCCcCCccccCC-CCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccccccc----
Q 006922 480 LAPVIARAAGYRAPEVTDS-RKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDV---- 554 (625)
Q Consensus 480 ~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~---- 554 (625)
......++..|+|||.+.+ ..++.++|||||||++|||++|+.||......+....+.........++...+.+.
T Consensus 179 ~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 258 (353)
T 3coi_A 179 EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKS 258 (353)
T ss_dssp -----CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCHHHHH
T ss_pred CccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhHHHHH
Confidence 5555678899999999876 67899999999999999999999999865432222111100000000000000000
Q ss_pred ------c--ccCC-CCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006922 555 ------E--LLRY-PNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR 592 (625)
Q Consensus 555 ------~--~~~~-~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 592 (625)
. .... ........++.+++.+|+..||++|||+.|+++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 305 (353)
T 3coi_A 259 YIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 305 (353)
T ss_dssp HHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 0 0000 001122346777888999999999999999986
No 208
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=3.7e-38 Score=345.07 Aligned_cols=241 Identities=19% Similarity=0.310 Sum_probs=190.9
Q ss_pred HhHcccCCceeEEEEEEc-CCcEEEEEEecccc---CChHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccCC
Q 006922 329 AEVLGKGTFGMAYKAILE-DGTTVVVKRLKDVN---VGKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLG 404 (625)
Q Consensus 329 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 404 (625)
.+.||+|+||+||+|... ++..||+|+++... .....+.+|++++..++||||++++++|.+.+..++||||+++|
T Consensus 42 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g 121 (494)
T 3lij_A 42 VKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGG 121 (494)
T ss_dssp EEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCCSC
T ss_pred eeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCCC
Confidence 367999999999999965 68999999997643 23467899999999999999999999999999999999999999
Q ss_pred ChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCC---CCeeEeccccccccccc-
Q 006922 405 SVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQ---QYGCVSDLGLTTITSAL- 480 (625)
Q Consensus 405 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~---~~~kl~DfGla~~~~~~- 480 (625)
+|.+.+.... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.. +.+||+|||+++.....
T Consensus 122 ~L~~~~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~ 193 (494)
T 3lij_A 122 ELFDEIIHRM-----KFNEVDAAVIIKQVLSGVTYLHKHN---IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQK 193 (494)
T ss_dssp BHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTB
T ss_pred cHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCc
Confidence 9999887543 3899999999999999999999998 9999999999999764 45999999999876532
Q ss_pred -ccccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccccccccccCC
Q 006922 481 -APVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRY 559 (625)
Q Consensus 481 -~~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 559 (625)
.....||+.|+|||++. ..++.++||||+||++|||++|+.||......+....+. .... ....+. .
T Consensus 194 ~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~------~~~~--~~~~~~---~ 261 (494)
T 3lij_A 194 KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVE------KGKY--TFDSPE---W 261 (494)
T ss_dssp CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH------HTCC--CCCSGG---G
T ss_pred cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH------hCCC--CCCchh---c
Confidence 23456899999999986 469999999999999999999999997654433222211 1110 000000 1
Q ss_pred CCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006922 560 PNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR 592 (625)
Q Consensus 560 ~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 592 (625)
+. ...++.+++.+||+.+|.+|||+.|+++
T Consensus 262 ~~---~s~~~~~li~~~L~~dp~~R~s~~e~l~ 291 (494)
T 3lij_A 262 KN---VSEGAKDLIKQMLQFDSQRRISAQQALE 291 (494)
T ss_dssp TT---SCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cc---CCHHHHHHHHHHCCCChhhCccHHHHhc
Confidence 11 1235667788999999999999999985
No 209
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=3.2e-38 Score=346.42 Aligned_cols=246 Identities=22% Similarity=0.324 Sum_probs=194.9
Q ss_pred hHcccCCceeEEEEEEc-CCcEEEEEEecccc--------------CChHHHHHHHHHHHcCCCCceecceeEEEecCce
Q 006922 330 EVLGKGTFGMAYKAILE-DGTTVVVKRLKDVN--------------VGKRDFEQQMEIVGSIRHENVVELKAYYYSKDEK 394 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~--------------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 394 (625)
+.||+|+||+||+|... +++.||+|+++... ...+.+.+|++++.+++||||+++++++.+.+..
T Consensus 42 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 121 (504)
T 3q5i_A 42 RKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYF 121 (504)
T ss_dssp EEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEE
T ss_pred eEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEE
Confidence 57999999999999965 68899999997543 2235688999999999999999999999999999
Q ss_pred EEEEEeccCCChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCC---CeeEecc
Q 006922 395 LMVYDYYSLGSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQ---YGCVSDL 471 (625)
Q Consensus 395 ~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~---~~kl~Df 471 (625)
++||||+++|+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++ .+||+||
T Consensus 122 ~lv~e~~~gg~L~~~l~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~Df 193 (504)
T 3q5i_A 122 YLVTEFYEGGELFEQIINRH-----KFDECDAANIMKQILSGICYLHKHN---IVHRDIKPENILLENKNSLLNIKIVDF 193 (504)
T ss_dssp EEEEECCTTCBHHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESSTTCCSSEEECCC
T ss_pred EEEEecCCCCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCcHHHEEEecCCCCccEEEEEC
Confidence 99999999999999887643 3899999999999999999999998 99999999999998876 6999999
Q ss_pred ccccccccc--ccccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhccccc
Q 006922 472 GLTTITSAL--APVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTA 549 (625)
Q Consensus 472 Gla~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 549 (625)
|+++..... .....||+.|+|||++.+ .++.++||||+||++|||++|+.||......+....+. ....
T Consensus 194 g~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~------~~~~-- 264 (504)
T 3q5i_A 194 GLSSFFSKDYKLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVE------KGKY-- 264 (504)
T ss_dssp TTCEECCTTSCBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH------HCCC--
T ss_pred CCCEEcCCCCccccccCCcCCCCHHHhcc-CCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH------cCCC--
Confidence 999876543 234568899999999874 69999999999999999999999998654433222221 1110
Q ss_pred ccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHHhhC
Q 006922 550 EVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR--VIENVR 598 (625)
Q Consensus 550 ~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~--~L~~~~ 598 (625)
.++.. ..+. ...++.+++.+|+..||.+|||+.|+++ .+++..
T Consensus 265 -~~~~~--~~~~---~s~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~ 309 (504)
T 3q5i_A 265 -YFDFN--DWKN---ISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYA 309 (504)
T ss_dssp -CCCHH--HHTT---SCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHTC
T ss_pred -CCCcc--ccCC---CCHHHHHHHHHHcCCChhHCCCHHHHhcCHhhhhch
Confidence 00000 0011 1235677888999999999999999986 344443
No 210
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=1.6e-38 Score=347.31 Aligned_cols=247 Identities=23% Similarity=0.355 Sum_probs=199.0
Q ss_pred HhHcccCCceeEEEEEEc-CCcEEEEEEecccc----CChHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccC
Q 006922 329 AEVLGKGTFGMAYKAILE-DGTTVVVKRLKDVN----VGKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSL 403 (625)
Q Consensus 329 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 403 (625)
.+.||+|+||+||++... +|+.||||++.... ...+.+.+|++++.+++||||+++++++...+..++||||+.+
T Consensus 31 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~ 110 (484)
T 3nyv_A 31 QRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTG 110 (484)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred eeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEecCCC
Confidence 357999999999999965 79999999996542 2356789999999999999999999999999999999999999
Q ss_pred CChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEe---CCCCCeeEeccccccccccc
Q 006922 404 GSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFL---NSQQYGCVSDLGLTTITSAL 480 (625)
Q Consensus 404 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll---~~~~~~kl~DfGla~~~~~~ 480 (625)
|+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+|||+ +.++.+||+|||+++.....
T Consensus 111 ~~L~~~~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~ 182 (484)
T 3nyv_A 111 GELFDEIISRK-----RFSEVDAARIIRQVLSGITYMHKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS 182 (484)
T ss_dssp CBHHHHHHTCS-----CCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCC
T ss_pred CCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEcccc
Confidence 99999887543 3899999999999999999999998 9999999999999 56789999999999876543
Q ss_pred c--cccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccccccccccC
Q 006922 481 A--PVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLR 558 (625)
Q Consensus 481 ~--~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 558 (625)
. ....||+.|+|||++.+ .++.++||||+||++|||++|+.||......+... .+. ..... ...
T Consensus 183 ~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~---~i~---~~~~~-----~~~-- 248 (484)
T 3nyv_A 183 KKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILK---KVE---KGKYT-----FEL-- 248 (484)
T ss_dssp CSHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH---HHH---HCCCC-----CCS--
T ss_pred cccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHH---HHH---cCCCC-----CCC--
Confidence 2 33468899999999876 68999999999999999999999997654332222 111 11100 000
Q ss_pred CCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHHhhC
Q 006922 559 YPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR--VIENVR 598 (625)
Q Consensus 559 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~--~L~~~~ 598 (625)
+.......++.+++.+||+.+|.+|||+.|+++ .++...
T Consensus 249 -~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h~~~~~~~ 289 (484)
T 3nyv_A 249 -PQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYT 289 (484)
T ss_dssp -GGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHHHT
T ss_pred -cccccCCHHHHHHHHHHCCCChhHCcCHHHHhhChhhcccc
Confidence 111122345677888999999999999999986 444443
No 211
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=2.1e-38 Score=334.19 Aligned_cols=252 Identities=21% Similarity=0.295 Sum_probs=188.8
Q ss_pred hHcccCCceeEEEEEEc-CCcEEEEEEeccccCC---hHHHHHHHHHHHcCCCCceecceeEEEecCce------EEEEE
Q 006922 330 EVLGKGTFGMAYKAILE-DGTTVVVKRLKDVNVG---KRDFEQQMEIVGSIRHENVVELKAYYYSKDEK------LMVYD 399 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~------~lv~e 399 (625)
+.||+|+||+||+|... +|+.||||+++..... .+.+.+|++++..++||||+++++++...+.. ++|||
T Consensus 48 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e 127 (371)
T 4exu_A 48 THVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMP 127 (371)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCCCEEEEE
T ss_pred eEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccceeEEEEEc
Confidence 56999999999999954 6899999999865433 35688999999999999999999999877654 99999
Q ss_pred eccCCChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEecccccccccc
Q 006922 400 YYSLGSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSA 479 (625)
Q Consensus 400 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~ 479 (625)
|+. ++|.+.+.. .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 128 ~~~-~~l~~~~~~-------~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~ 196 (371)
T 4exu_A 128 FMQ-TDLQKIMGM-------EFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHADA 196 (371)
T ss_dssp CCC-EEHHHHTTS-------CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECSTTCC-----
T ss_pred ccc-ccHHHHhhc-------CCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCcCHHHeEECCCCCEEEEecCccccccc
Confidence 998 588777742 2899999999999999999999998 99999999999999999999999999988766
Q ss_pred cccccccCCCcCCccccCC-CCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhccccccccc-----
Q 006922 480 LAPVIARAAGYRAPEVTDS-RKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFD----- 553 (625)
Q Consensus 480 ~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d----- 553 (625)
......+|..|+|||++.+ ..++.++|||||||++|||++|+.||......+....+.........+....+.+
T Consensus 197 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 276 (371)
T 4exu_A 197 EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKS 276 (371)
T ss_dssp ---CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHHHHH
T ss_pred CcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhhhhh
Confidence 6566678999999999877 7889999999999999999999999976543222211110000000000000000
Q ss_pred --ccccCCC--Cc----HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006922 554 --VELLRYP--NI----EEEMVEMLQIAMSCVVRMPDQRPKMPDVVR 592 (625)
Q Consensus 554 --~~~~~~~--~~----~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 592 (625)
......+ .. .....++.+++.+|++.||++|||+.|+++
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 323 (371)
T 4exu_A 277 YIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 323 (371)
T ss_dssp HHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred hhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhc
Confidence 0000000 00 011346778888999999999999999986
No 212
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=1.8e-38 Score=324.74 Aligned_cols=241 Identities=18% Similarity=0.315 Sum_probs=190.3
Q ss_pred hHcccCCceeEEEEEEc-CCcEEEEEEecccc-CChHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccCCChh
Q 006922 330 EVLGKGTFGMAYKAILE-DGTTVVVKRLKDVN-VGKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLGSVS 407 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~ 407 (625)
+.||+|+||+||+|... +++.||+|++.... ...+.+.+|++++.+++||||+++++++...+..++||||+++++|.
T Consensus 25 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~ 104 (302)
T 2j7t_A 25 GELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVD 104 (302)
T ss_dssp EEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEECCTTEEHH
T ss_pred ceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEeCCCCcHH
Confidence 56999999999999965 58999999997653 33577899999999999999999999999999999999999999999
Q ss_pred hhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEecccccccccc---ccccc
Q 006922 408 AMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSA---LAPVI 484 (625)
Q Consensus 408 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~---~~~~~ 484 (625)
+++..... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++..... .....
T Consensus 105 ~~~~~~~~----~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 177 (302)
T 2j7t_A 105 AIMLELDR----GLTEPQIQVVCRQMLEALNFLHSKR---IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSF 177 (302)
T ss_dssp HHHHHHTS----CCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHHC----
T ss_pred HHHHhhcc----CCCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHHHEEECCCCCEEEEECCCCccccccccccccc
Confidence 98875432 3899999999999999999999998 99999999999999999999999999764321 12234
Q ss_pred ccCCCcCCcccc-----CCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccccccccccCC
Q 006922 485 ARAAGYRAPEVT-----DSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRY 559 (625)
Q Consensus 485 ~~~~~y~aPE~~-----~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 559 (625)
.++..|+|||++ ....++.++||||||+++|||++|+.||......+.. ........ ...
T Consensus 178 ~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~------~~~~~~~~-~~~-------- 242 (302)
T 2j7t_A 178 IGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVL------LKIAKSDP-PTL-------- 242 (302)
T ss_dssp -CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH------HHHHHSCC-CCC--------
T ss_pred cCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHH------HHHhccCC-ccc--------
Confidence 678889999988 4667899999999999999999999999765432211 11111111 000
Q ss_pred CCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006922 560 PNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR 592 (625)
Q Consensus 560 ~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 592 (625)
........++.+++.+||..||.+|||+.|+++
T Consensus 243 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 243 LTPSKWSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp SSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred CCccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 011112345778888999999999999999875
No 213
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=1.7e-38 Score=332.14 Aligned_cols=256 Identities=19% Similarity=0.280 Sum_probs=197.8
Q ss_pred hHcccCCceeEEEEEEc-CC-cEEEEEEeccccCChHHHHHHHHHHHcCCCCc------eecceeEEEecCceEEEEEec
Q 006922 330 EVLGKGTFGMAYKAILE-DG-TTVVVKRLKDVNVGKRDFEQQMEIVGSIRHEN------VVELKAYYYSKDEKLMVYDYY 401 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~-~g-~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~n------iv~l~~~~~~~~~~~lv~e~~ 401 (625)
+.||+|+||+||+|... ++ +.||+|+++......+.+.+|++++.+++|++ ++.+.+++...+..++||||+
T Consensus 25 ~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~ 104 (355)
T 2eu9_A 25 GNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELL 104 (355)
T ss_dssp EEEEEETTEEEEEEEETTTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEEEEEEECC
T ss_pred EEeeccCCeEEEEEEecCCCceEEEEEEEcccccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeEEEEEecc
Confidence 56999999999999964 34 78999999865444567889999999987766 899999999999999999999
Q ss_pred cCCChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEe-------------------CC
Q 006922 402 SLGSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFL-------------------NS 462 (625)
Q Consensus 402 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll-------------------~~ 462 (625)
++++.+++.... ...+++..+..++.|++.||+|||+.+ |+||||||+|||+ +.
T Consensus 105 -~~~l~~~l~~~~---~~~~~~~~~~~i~~qi~~~L~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~~ 177 (355)
T 2eu9_A 105 -GKNTFEFLKENN---FQPYPLPHVRHMAYQLCHALRFLHENQ---LTHTDLKPENILFVNSEFETLYNEHKSCEEKSVK 177 (355)
T ss_dssp -CCBHHHHHHHTT---TCCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEESCCCEEEEECCC-CCCEEEES
T ss_pred -CCChHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEecccccccccccccccccccC
Confidence 567777766543 124899999999999999999999998 9999999999999 56
Q ss_pred CCCeeEecccccccccccccccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHH
Q 006922 463 QQYGCVSDLGLTTITSALAPVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSV 542 (625)
Q Consensus 463 ~~~~kl~DfGla~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~ 542 (625)
++.+||+|||+++..........+|..|+|||++.+..++.++|||||||++|||++|+.||......+....+......
T Consensus 178 ~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~ 257 (355)
T 2eu9_A 178 NTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGP 257 (355)
T ss_dssp CCCEEECCCTTCEETTSCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCC
T ss_pred CCcEEEeecCccccccccccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCC
Confidence 78999999999988766656667899999999999999999999999999999999999999865443332222211110
Q ss_pred hhcccc-----cccccc-cc--------------------cCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006922 543 VREEWT-----AEVFDV-EL--------------------LRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR 592 (625)
Q Consensus 543 ~~~~~~-----~~~~d~-~~--------------------~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 592 (625)
...... ...+.. .. ...........++.+++.+||+.||++|||+.|+++
T Consensus 258 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 333 (355)
T 2eu9_A 258 IPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALL 333 (355)
T ss_dssp CCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred CcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 000000 000000 00 000112233457889999999999999999999985
No 214
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=6.5e-38 Score=323.87 Aligned_cols=242 Identities=21% Similarity=0.310 Sum_probs=188.7
Q ss_pred HhHcccCCceeEEEEEEc-CCcEEEEEEeccccC---------ChHHHHHHHHHHHcCCCCceecceeEEEecCceEEEE
Q 006922 329 AEVLGKGTFGMAYKAILE-DGTTVVVKRLKDVNV---------GKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVY 398 (625)
Q Consensus 329 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~---------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 398 (625)
.+.||+|+||.||+|... +++.||||++..... ....+.+|++++.+++||||+++++++...+ .++||
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-~~lv~ 93 (322)
T 2ycf_A 15 SKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED-YYIVL 93 (322)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS-EEEEE
T ss_pred eeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc-eEEEE
Confidence 367999999999999964 689999999975421 1245889999999999999999999987654 89999
Q ss_pred EeccCCChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCC---eeEecccccc
Q 006922 399 DYYSLGSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQY---GCVSDLGLTT 475 (625)
Q Consensus 399 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~---~kl~DfGla~ 475 (625)
||+++++|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++. +||+|||+++
T Consensus 94 e~~~~~~L~~~~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~ 165 (322)
T 2ycf_A 94 ELMEGGELFDKVVGNK-----RLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSK 165 (322)
T ss_dssp ECCTTEETHHHHSTTC-----CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSSSCCEEECCCTTCE
T ss_pred ecCCCCcHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEecCCCCCeEEEccCccce
Confidence 9999999999887542 4899999999999999999999998 999999999999987665 9999999998
Q ss_pred cccccc--cccccCCCcCCcccc---CCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccc
Q 006922 476 ITSALA--PVIARAAGYRAPEVT---DSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAE 550 (625)
Q Consensus 476 ~~~~~~--~~~~~~~~y~aPE~~---~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 550 (625)
...... ....++..|+|||++ ....++.++|||||||++|||++|+.||........ ....+. .....
T Consensus 166 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~--~~~~~~----~~~~~- 238 (322)
T 2ycf_A 166 ILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS--LKDQIT----SGKYN- 238 (322)
T ss_dssp ECCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSC--HHHHHH----HTCCC-
T ss_pred ecccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHH--HHHHHH----hCccc-
Confidence 765432 234688899999986 356789999999999999999999999976543321 111111 11000
Q ss_pred cccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006922 551 VFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR 592 (625)
Q Consensus 551 ~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 592 (625)
..+... .....++.+++.+||..||++||++.|+++
T Consensus 239 -~~~~~~-----~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 239 -FIPEVW-----AEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp -CCHHHH-----TTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred -cCchhh-----hhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 000000 011246778888999999999999999984
No 215
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=3.1e-38 Score=322.45 Aligned_cols=254 Identities=17% Similarity=0.273 Sum_probs=192.2
Q ss_pred hHcccCCceeEEEEEEc-CCcEEEEEEeccccC---ChHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccCCC
Q 006922 330 EVLGKGTFGMAYKAILE-DGTTVVVKRLKDVNV---GKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLGS 405 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~---~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 405 (625)
+.||+|+||+||+|... +|+.||+|+++.... ..+.+.+|++++.+++||||+++++++...+..++||||++ ++
T Consensus 9 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~ 87 (299)
T 2r3i_A 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QD 87 (299)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCS-EE
T ss_pred hhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEEccc-CC
Confidence 56999999999999965 689999999975432 23678899999999999999999999999999999999998 59
Q ss_pred hhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEeccccccccccc---cc
Q 006922 406 VSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSAL---AP 482 (625)
Q Consensus 406 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~---~~ 482 (625)
|.+++..... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++...... ..
T Consensus 88 L~~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~ 161 (299)
T 2r3i_A 88 LKKFMDASAL---TGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT 161 (299)
T ss_dssp HHHHHHHTTT---TCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCSBCTT
T ss_pred HHHHHHhhhc---cCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHeEEcCCCCEEECcchhhhhccCCccccC
Confidence 9998876532 24889999999999999999999998 999999999999999999999999999875432 22
Q ss_pred ccccCCCcCCccccCCCC-CCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhc--cccccc-----ccc
Q 006922 483 VIARAAGYRAPEVTDSRK-ATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVRE--EWTAEV-----FDV 554 (625)
Q Consensus 483 ~~~~~~~y~aPE~~~~~~-~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-----~d~ 554 (625)
...++..|+|||.+.+.. ++.++||||||+++|||+||+.||......+. ........-.. ...... +.+
T Consensus 162 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (299)
T 2r3i_A 162 HEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ--LFRIFRTLGTPDEVVWPGVTSMPDYKP 239 (299)
T ss_dssp SCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH--HHHHHHHHCCCCTTTSTTGGGSTTCCT
T ss_pred cccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHH--HHHHHHHhCCCchhhhhHhhcCcccch
Confidence 345788899999987755 79999999999999999999999976543221 11111111000 000000 000
Q ss_pred cccCC--CCc----HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006922 555 ELLRY--PNI----EEEMVEMLQIAMSCVVRMPDQRPKMPDVVR 592 (625)
Q Consensus 555 ~~~~~--~~~----~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 592 (625)
..... ... .....++.+++.+|++.||++|||+.|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp TSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 00000 000 011245678888999999999999999986
No 216
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=8.8e-39 Score=326.91 Aligned_cols=249 Identities=22% Similarity=0.354 Sum_probs=178.8
Q ss_pred hHcccCCceeEEEEEE-cCCcEEEEEEecccc--CChHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccCCCh
Q 006922 330 EVLGKGTFGMAYKAIL-EDGTTVVVKRLKDVN--VGKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLGSV 406 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 406 (625)
+.||+|+||+||+|.. .+++.||||++.... ...+.+.+|++++.+++||||+++++++...+..++||||+++++|
T Consensus 21 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 100 (303)
T 2vwi_A 21 EVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSV 100 (303)
T ss_dssp EECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEEECCTTCBH
T ss_pred heeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEehhccCCch
Confidence 5799999999999984 478999999987542 2346788999999999999999999999999999999999999999
Q ss_pred hhhhccccC---CCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEeccccccccccc---
Q 006922 407 SAMLHSERG---EGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSAL--- 480 (625)
Q Consensus 407 ~~~l~~~~~---~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~--- 480 (625)
.+++..... .....+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 101 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~ 177 (303)
T 2vwi_A 101 LDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG---QIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDI 177 (303)
T ss_dssp HHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTCCEEECCCHHHHHCC-----
T ss_pred HHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCC---CCCCCCChhhEEEcCCCCEEEEeccchheeccCCCc
Confidence 999874211 11235899999999999999999999998 999999999999999999999999998765422
Q ss_pred -----ccccccCCCcCCccccCC-CCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccc---ccc
Q 006922 481 -----APVIARAAGYRAPEVTDS-RKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWT---AEV 551 (625)
Q Consensus 481 -----~~~~~~~~~y~aPE~~~~-~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 551 (625)
.....++..|+|||.+.+ ..++.++||||||+++|||++|+.||......+... . ....... ...
T Consensus 178 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~--~----~~~~~~~~~~~~~ 251 (303)
T 2vwi_A 178 TRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLM--L----TLQNDPPSLETGV 251 (303)
T ss_dssp ----------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHH--H----HHTSSCCCTTC--
T ss_pred cchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHH--H----HhccCCCcccccc
Confidence 123457888999999865 568999999999999999999999997654332211 1 1111100 000
Q ss_pred ccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006922 552 FDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR 592 (625)
Q Consensus 552 ~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 592 (625)
.+... ......++.+++.+||+.||.+||++.|+++
T Consensus 252 ~~~~~-----~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 252 QDKEM-----LKKYGKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp ---CC-----CCCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred ccchh-----hhhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 11111 0111235677888999999999999999986
No 217
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=4.9e-38 Score=318.59 Aligned_cols=239 Identities=21% Similarity=0.300 Sum_probs=190.3
Q ss_pred HhHcccCCceeEEEEEEc-CCcEEEEEEeccccC---ChHHHHHHHHHHHcC-CCCceecceeEEEecCceEEEEEeccC
Q 006922 329 AEVLGKGTFGMAYKAILE-DGTTVVVKRLKDVNV---GKRDFEQQMEIVGSI-RHENVVELKAYYYSKDEKLMVYDYYSL 403 (625)
Q Consensus 329 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~---~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 403 (625)
.+.||+|+||+||+|... +++.||+|+++.... ....+.+|+..+.++ +||||+++++++.+.+..++||||+++
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 95 (289)
T 1x8b_A 16 LEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNG 95 (289)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred hhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEEecCC
Confidence 357999999999999965 799999999986432 235688899999999 899999999999999999999999999
Q ss_pred CChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCC-------------------C
Q 006922 404 GSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQ-------------------Q 464 (625)
Q Consensus 404 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~-------------------~ 464 (625)
++|.+++..... ....+++..+..++.|++.||+|||+++ |+||||||+||+++.+ .
T Consensus 96 ~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~ 171 (289)
T 1x8b_A 96 GSLADAISENYR-IMSYFKEAELKDLLLQVGRGLRYIHSMS---LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKV 171 (289)
T ss_dssp CBHHHHHHHHHH-HTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEC--------------------CC
T ss_pred CcHHHHHHhhcc-cccCCCHHHHHHHHHHHHHHHHHHHhCC---EeecCCCHHHEEEcCCCCCcccccccccccccCCce
Confidence 999999976431 1124899999999999999999999998 9999999999999844 4
Q ss_pred CeeEecccccccccccccccccCCCcCCccccCCC-CCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHh
Q 006922 465 YGCVSDLGLTTITSALAPVIARAAGYRAPEVTDSR-KATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVV 543 (625)
Q Consensus 465 ~~kl~DfGla~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~ 543 (625)
.+||+|||.+....... ...++..|+|||.+.+. .++.++|||||||++|||++|++|+... +.. .. +
T Consensus 172 ~~kl~Dfg~~~~~~~~~-~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~---~~~---~~----~ 240 (289)
T 1x8b_A 172 MFKIGDLGHVTRISSPQ-VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNG---DQW---HE----I 240 (289)
T ss_dssp CEEECCCTTCEETTCSC-CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSS---HHH---HH----H
T ss_pred EEEEcccccccccCCcc-ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcch---hHH---HH----H
Confidence 79999999998775433 33588899999998765 5668999999999999999999877432 111 10 1
Q ss_pred hcccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006922 544 REEWTAEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR 592 (625)
Q Consensus 544 ~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 592 (625)
...... ..+ .....++.+++.+||+.||++|||+.|+++
T Consensus 241 ~~~~~~--------~~~--~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 279 (289)
T 1x8b_A 241 RQGRLP--------RIP--QVLSQEFTELLKVMIHPDPERRPSAMALVK 279 (289)
T ss_dssp HTTCCC--------CCS--SCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HcCCCC--------CCC--cccCHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence 111111 001 111235677888999999999999999975
No 218
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.5e-38 Score=327.32 Aligned_cols=241 Identities=20% Similarity=0.356 Sum_probs=189.3
Q ss_pred hHcccCCceeEEEEEE-cCCcEEEEEEeccccCChHHHHHHHHHHHcC-CCCceecceeEEEe------cCceEEEEEec
Q 006922 330 EVLGKGTFGMAYKAIL-EDGTTVVVKRLKDVNVGKRDFEQQMEIVGSI-RHENVVELKAYYYS------KDEKLMVYDYY 401 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~------~~~~~lv~e~~ 401 (625)
+.||+|+||.||+|.. .+|+.||+|++.......+.+.+|++++.++ +||||+++++++.. .+..++||||+
T Consensus 30 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~ 109 (326)
T 2x7f_A 30 ELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFC 109 (326)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECCSSTTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCEEEEEEECC
T ss_pred EEeccCCCEEEEEEEECCCCCeEEEEEEecCcccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccceEEEEEEcC
Confidence 5799999999999996 4789999999987666668899999999998 79999999999987 45789999999
Q ss_pred cCCChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEeccccccccccc-
Q 006922 402 SLGSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSAL- 480 (625)
Q Consensus 402 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~- 480 (625)
++|+|.+++.... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 110 ~~~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 183 (326)
T 2x7f_A 110 GAGSVTDLIKNTK---GNTLKEEWIAYICREILRGLSHLHQHK---VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTV 183 (326)
T ss_dssp TTEEHHHHHHHSG---GGCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTCCEEECCCTTTC------
T ss_pred CCCcHHHHHHhcc---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCcHHHEEEcCCCCEEEeeCcCceecCcCc
Confidence 9999999998643 224899999999999999999999998 999999999999999999999999999875432
Q ss_pred --ccccccCCCcCCccccC-----CCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhccccccccc
Q 006922 481 --APVIARAAGYRAPEVTD-----SRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFD 553 (625)
Q Consensus 481 --~~~~~~~~~y~aPE~~~-----~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 553 (625)
.....++..|+|||++. ...++.++|||||||++|||++|+.||......+.. .. .... .....
T Consensus 184 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~---~~---~~~~-~~~~~-- 254 (326)
T 2x7f_A 184 GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRAL---FL---IPRN-PAPRL-- 254 (326)
T ss_dssp -------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHH---HH---HHHS-CCCCC--
T ss_pred cccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHH---HH---hhcC-ccccC--
Confidence 22346788899999986 567899999999999999999999999764322111 11 1111 10000
Q ss_pred ccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006922 554 VELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR 592 (625)
Q Consensus 554 ~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 592 (625)
. .... ...+.+++.+||..||.+||++.|+++
T Consensus 255 ---~-~~~~---~~~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 255 ---K-SKKW---SKKFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp ---S-CSCS---CHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred ---C-cccc---CHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 0 0111 235677888999999999999999986
No 219
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=3.4e-38 Score=329.41 Aligned_cols=251 Identities=17% Similarity=0.210 Sum_probs=195.3
Q ss_pred hHcccCCceeEEEEEEcCCcEEEEEEeccccCCh------------------HHHHHHHHHHHcCCCCceecceeEEEec
Q 006922 330 EVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGK------------------RDFEQQMEIVGSIRHENVVELKAYYYSK 391 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~------------------~~~~~e~~~l~~l~h~niv~l~~~~~~~ 391 (625)
+.||+|+||.||+|.. +|+.||+|++....... +.+.+|++++.+++||||+++++++.+.
T Consensus 37 ~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 115 (348)
T 2pml_X 37 RTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIITNY 115 (348)
T ss_dssp EEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCSEEEESS
T ss_pred EEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEEEEEeeC
Confidence 5699999999999999 89999999997542211 7799999999999999999999999999
Q ss_pred CceEEEEEeccCCChhhh------hccccCCCCccCCHHHHHHHHHHHHHHHHHHHh-cCCCCceecCCCCCCEEeCCCC
Q 006922 392 DEKLMVYDYYSLGSVSAM------LHSERGEGRIPLDWDTRMRIAIGAARGIARIHA-ANGGKLVHGNIKSSNIFLNSQQ 464 (625)
Q Consensus 392 ~~~~lv~e~~~~g~L~~~------l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~-~~~~~ivHrDlk~~NIll~~~~ 464 (625)
+..++||||+++|+|.++ +... ....+++..+..++.|++.||+|||+ .+ |+||||||+||+++.++
T Consensus 116 ~~~~lv~e~~~~~~L~~~~~~~~~l~~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~~~---i~H~dl~p~Nil~~~~~ 189 (348)
T 2pml_X 116 DEVYIIYEYMENDSILKFDEYFFVLDKN---YTCFIPIQVIKCIIKSVLNSFSYIHNEKN---ICHRDVKPSNILMDKNG 189 (348)
T ss_dssp SEEEEEEECCTTCBSSEESSSEESSCSS---SCCCCCHHHHHHHHHHHHHHHHHHHHTSC---EECCCCCGGGEEECTTS
T ss_pred CeEEEEEeccCCCcHHHHHHHhhhhhhc---cccCCCHHHHHHHHHHHHHHHHHHhccCC---EeecCCChHhEEEcCCC
Confidence 999999999999999998 5432 13458999999999999999999999 77 99999999999999999
Q ss_pred CeeEeccccccccccc-ccccccCCCcCCccccCCC-CCCC-ccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHH
Q 006922 465 YGCVSDLGLTTITSAL-APVIARAAGYRAPEVTDSR-KATQ-ASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHS 541 (625)
Q Consensus 465 ~~kl~DfGla~~~~~~-~~~~~~~~~y~aPE~~~~~-~~~~-~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~ 541 (625)
.+||+|||++...... .....++..|+|||.+.+. .++. ++||||||+++|||++|+.||...... ......+
T Consensus 190 ~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~~i-- 265 (348)
T 2pml_X 190 RVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL--VELFNNI-- 265 (348)
T ss_dssp CEEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCS--HHHHHHH--
T ss_pred cEEEeccccccccccccccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcH--HHHHHHH--
Confidence 9999999999875432 3345678889999999877 6666 999999999999999999999865431 1112111
Q ss_pred Hhhcccccc-----cccccccC--CCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006922 542 VVREEWTAE-----VFDVELLR--YPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR 592 (625)
Q Consensus 542 ~~~~~~~~~-----~~d~~~~~--~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 592 (625)
........ ........ .........++.+++.+||+.||.+|||+.|+++
T Consensus 266 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 266 -RTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp -TSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred -hccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 11110000 00000000 0000112346778888999999999999999986
No 220
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=3.4e-38 Score=331.78 Aligned_cols=253 Identities=19% Similarity=0.294 Sum_probs=191.8
Q ss_pred hHcccCCceeEEEEEEc-CCcEEEEEEeccccCC--hHHHHHHHHHHHcCCCCceecceeEEEec-----CceEEEEEec
Q 006922 330 EVLGKGTFGMAYKAILE-DGTTVVVKRLKDVNVG--KRDFEQQMEIVGSIRHENVVELKAYYYSK-----DEKLMVYDYY 401 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~--~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~~~lv~e~~ 401 (625)
+.||+|+||+||+|... +++.||||++...... .+.+.+|++++.+++||||+++++++... ...++||||+
T Consensus 33 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~iv~e~~ 112 (364)
T 3qyz_A 33 SYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM 112 (364)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEEEEECC
T ss_pred EEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEEEEEccc
Confidence 57999999999999954 6889999999754322 25688999999999999999999999765 3689999999
Q ss_pred cCCChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEecccccccccccc
Q 006922 402 SLGSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALA 481 (625)
Q Consensus 402 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~ 481 (625)
++ +|.+++... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 113 ~~-~L~~~l~~~------~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~ 182 (364)
T 3qyz_A 113 ET-DLYKLLKTQ------HLSNDHICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 182 (364)
T ss_dssp SE-EHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEECCGGG
T ss_pred Cc-CHHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCChHhEEECCCCCEEEEeCcceEecCCCC
Confidence 85 899888653 3899999999999999999999998 9999999999999999999999999998764322
Q ss_pred ------cccccCCCcCCccccCC-CCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccccccc
Q 006922 482 ------PVIARAAGYRAPEVTDS-RKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDV 554 (625)
Q Consensus 482 ------~~~~~~~~y~aPE~~~~-~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 554 (625)
....+|..|+|||++.+ ..++.++||||+||++|||++|+.||......+....+.........+....+.+.
T Consensus 183 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 262 (364)
T 3qyz_A 183 DHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 262 (364)
T ss_dssp CBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCCH
T ss_pred CccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhh
Confidence 23467888999998654 45899999999999999999999999876544433222110000000000000000
Q ss_pred -------cccC-CC-Cc----HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006922 555 -------ELLR-YP-NI----EEEMVEMLQIAMSCVVRMPDQRPKMPDVVR 592 (625)
Q Consensus 555 -------~~~~-~~-~~----~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 592 (625)
.... .. .. .....++.+++.+|++.||++|||+.|+++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 313 (364)
T 3qyz_A 263 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313 (364)
T ss_dssp HHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0000 00 00 011245678888999999999999999986
No 221
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=2.9e-38 Score=329.07 Aligned_cols=243 Identities=18% Similarity=0.364 Sum_probs=190.0
Q ss_pred hHcccCCceeEEEEEE-cCCcEEEEEEeccccCC--hHHHHHHHHH-HHcCCCCceecceeEEEecCceEEEEEeccCCC
Q 006922 330 EVLGKGTFGMAYKAIL-EDGTTVVVKRLKDVNVG--KRDFEQQMEI-VGSIRHENVVELKAYYYSKDEKLMVYDYYSLGS 405 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~--~~~~~~e~~~-l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 405 (625)
+.||+|+||+||+|.. .+|+.||||+++..... ...+..|+.+ +..++||||+++++++...+..++||||+++ +
T Consensus 57 ~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~-~ 135 (340)
T 3an0_A 57 MELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDT-S 135 (340)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEEECCCSE-E
T ss_pred eEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEEHHHhhC-c
Confidence 5699999999999995 57999999999865433 2445566655 6778999999999999999999999999986 9
Q ss_pred hhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhc-CCCCceecCCCCCCEEeCCCCCeeEecccccccccccc--c
Q 006922 406 VSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAA-NGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALA--P 482 (625)
Q Consensus 406 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~-~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~--~ 482 (625)
|.+++..... ....+++..+..++.|++.||+|||+. + |+||||||+|||++.++.+||+|||+++...... .
T Consensus 136 L~~~l~~~~~-~~~~l~~~~~~~i~~qi~~~l~~lH~~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~ 211 (340)
T 3an0_A 136 LDKFYKQVID-KGQTIPEDILGKIAVSIVKALEHLHSKLS---VIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKT 211 (340)
T ss_dssp HHHHHHHHHH-TSCCCCHHHHHHHHHHHHHHHHHHHHHTC---CCCCSCCSTTEEECSTTCEEECCCSHHHHHSCHHHHH
T ss_pred HHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHhhcCC---eecCCCCHHHEEECCCCCEEEeeCCCceecccccccc
Confidence 9888865321 123589999999999999999999987 7 9999999999999999999999999998764322 2
Q ss_pred ccccCCCcCCccccC----CCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccccccccccC
Q 006922 483 VIARAAGYRAPEVTD----SRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLR 558 (625)
Q Consensus 483 ~~~~~~~y~aPE~~~----~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 558 (625)
...++..|+|||++. ...++.++|||||||++|||+||+.||...... ... +......... .
T Consensus 212 ~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~-~~~----~~~~~~~~~~-~-------- 277 (340)
T 3an0_A 212 IDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTP-FQQ----LKQVVEEPSP-Q-------- 277 (340)
T ss_dssp HSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCH-HHH----HHHHHHSCCC-C--------
T ss_pred cCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccch-HHH----HHHHhcCCCC-C--------
Confidence 246888999999964 347899999999999999999999999754321 111 1111111100 0
Q ss_pred CCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006922 559 YPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR 592 (625)
Q Consensus 559 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 592 (625)
.+ ......++.+++.+||..||++||++.|+++
T Consensus 278 ~~-~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 310 (340)
T 3an0_A 278 LP-ADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 310 (340)
T ss_dssp CC-GGGSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CC-cccCCHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 00 1112346778888999999999999999987
No 222
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=2.4e-38 Score=356.63 Aligned_cols=245 Identities=21% Similarity=0.373 Sum_probs=196.4
Q ss_pred HhHcccCCceeEEEEEEc----CCcEEEEEEeccccCC--hHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEecc
Q 006922 329 AEVLGKGTFGMAYKAILE----DGTTVVVKRLKDVNVG--KRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYS 402 (625)
Q Consensus 329 ~~~lg~G~~g~Vy~~~~~----~g~~vavK~l~~~~~~--~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 402 (625)
.+.||+|+||+||+|... .+..||||+++..... .+.+.+|+.++.+++||||+++++++. .+..++||||++
T Consensus 395 ~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~lv~E~~~ 473 (656)
T 2j0j_A 395 GRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCT 473 (656)
T ss_dssp EEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECCT
T ss_pred eeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceEEEEEcCC
Confidence 457999999999999863 2567999998764322 367899999999999999999999984 467899999999
Q ss_pred CCChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEeccccccccccccc
Q 006922 403 LGSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAP 482 (625)
Q Consensus 403 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~ 482 (625)
+|+|.+++.... ..+++..+..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++.......
T Consensus 474 ~g~L~~~l~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~~ 546 (656)
T 2j0j_A 474 LGELRSFLQVRK----FSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY 546 (656)
T ss_dssp TCBHHHHHHHTT----TTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCCCCCSCCC---
T ss_pred CCcHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchHhEEEeCCCCEEEEecCCCeecCCCcc
Confidence 999999997543 24899999999999999999999998 99999999999999999999999999987643321
Q ss_pred ----ccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHh-CCCCCCCCCCcchhhHHHHHHHHhhccccccccccccc
Q 006922 483 ----VIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELL 557 (625)
Q Consensus 483 ----~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 557 (625)
...++..|+|||.+.+..++.++|||||||++|||++ |+.||.+....+.. ..+. ....
T Consensus 547 ~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~---~~i~---~~~~---------- 610 (656)
T 2j0j_A 547 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI---GRIE---NGER---------- 610 (656)
T ss_dssp -------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHH---HHHH---HTCC----------
T ss_pred eeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHH---HHHH---cCCC----------
Confidence 2245567999999988899999999999999999997 99999765433222 2111 1110
Q ss_pred CCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhC
Q 006922 558 RYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVR 598 (625)
Q Consensus 558 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~ 598 (625)
.+........+.+++.+||..||.+|||+.|+++.|+.+.
T Consensus 611 -~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il 650 (656)
T 2j0j_A 611 -LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL 650 (656)
T ss_dssp -CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -CCCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 0111122346778888999999999999999999998874
No 223
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=5.3e-38 Score=329.99 Aligned_cols=252 Identities=17% Similarity=0.278 Sum_probs=185.5
Q ss_pred hHcccCCceeEEEEEEcCCcEEEEEEeccccCC------------hHHHHHHHHHHHcCCCCceecceeEEEec-----C
Q 006922 330 EVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVG------------KRDFEQQMEIVGSIRHENVVELKAYYYSK-----D 392 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~------------~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~ 392 (625)
+.||+|+||.||+|...+|+.||||++...... .+.+.+|++++.+++||||+++++++... .
T Consensus 28 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 107 (362)
T 3pg1_A 28 RFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMH 107 (362)
T ss_dssp EEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEEECCTTTCC
T ss_pred EEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEEeccCCCcc
Confidence 579999999999999888999999999653221 15689999999999999999999998653 3
Q ss_pred ceEEEEEeccCCChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEeccc
Q 006922 393 EKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLG 472 (625)
Q Consensus 393 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfG 472 (625)
..++||||++ |+|.+.+.... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||
T Consensus 108 ~~~lv~e~~~-~~l~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg 179 (362)
T 3pg1_A 108 KLYLVTELMR-TDLAQVIHDQR----IVISPQHIQYFMYHILLGLHVLHEAG---VVHRDLHPGNILLADNNDITICDFN 179 (362)
T ss_dssp EEEEEEECCS-EEHHHHHHCTT----SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECCTT
T ss_pred eEEEEEccCC-CCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHHCc---CEecCCChHHEEEcCCCCEEEEecC
Confidence 5799999998 58888887542 24899999999999999999999998 9999999999999999999999999
Q ss_pred cccccccc--ccccccCCCcCCccccCC-CCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccc-
Q 006922 473 LTTITSAL--APVIARAAGYRAPEVTDS-RKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWT- 548 (625)
Q Consensus 473 la~~~~~~--~~~~~~~~~y~aPE~~~~-~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~- 548 (625)
+++..... .....++..|+|||++.+ ..++.++|||||||++|||++|+.||......+.... +.........
T Consensus 180 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~---i~~~~~~~~~~ 256 (362)
T 3pg1_A 180 LAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNK---IVEVVGTPKIE 256 (362)
T ss_dssp C---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH---HHHHHCCCCHH
T ss_pred cccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHH---HHHHcCCCChH
Confidence 99865332 233467888999999876 6789999999999999999999999976543222211 1111100000
Q ss_pred ----------cccccccccCCCC------cHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006922 549 ----------AEVFDVELLRYPN------IEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR 592 (625)
Q Consensus 549 ----------~~~~d~~~~~~~~------~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 592 (625)
...+.......+. .......+.+++.+|++.||.+|||+.|+++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 316 (362)
T 3pg1_A 257 DVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALR 316 (362)
T ss_dssp HHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHc
Confidence 0000000000000 0011245778888999999999999999986
No 224
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=3.3e-38 Score=320.63 Aligned_cols=243 Identities=19% Similarity=0.340 Sum_probs=178.1
Q ss_pred hHcccCCceeEEEEEE-cCCcEEEEEEeccccCCh---HHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccCCC
Q 006922 330 EVLGKGTFGMAYKAIL-EDGTTVVVKRLKDVNVGK---RDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLGS 405 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~---~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 405 (625)
+.||+|+||+||++.. .+|+.||+|+++...... +.+.++...+..++||||+++++++...+..++||||+++ +
T Consensus 13 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~-~ 91 (290)
T 3fme_A 13 MELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDT-S 91 (290)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEEECCSE-E
T ss_pred HhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEEehhcc-c
Confidence 5699999999999996 579999999997653322 2234445557788999999999999999999999999985 8
Q ss_pred hhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhc-CCCCceecCCCCCCEEeCCCCCeeEecccccccccccc--c
Q 006922 406 VSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAA-NGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALA--P 482 (625)
Q Consensus 406 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~-~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~--~ 482 (625)
|.+++..... ....+++..+..++.|++.||+|||++ + |+||||||+||+++.++.+||+|||+++...... .
T Consensus 92 l~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 167 (290)
T 3fme_A 92 LDKFYKQVID-KGQTIPEDILGKIAVSIVKALEHLHSKLS---VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKD 167 (290)
T ss_dssp HHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHHHSC---CCCCCCSGGGCEECTTCCEEBCCC-------------
T ss_pred hHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHhhcCC---eecCCCCHHHEEECCCCCEEEeecCCccccccccccc
Confidence 8777764321 123589999999999999999999998 7 9999999999999999999999999998764332 2
Q ss_pred ccccCCCcCCcccc----CCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccccccccccC
Q 006922 483 VIARAAGYRAPEVT----DSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLR 558 (625)
Q Consensus 483 ~~~~~~~y~aPE~~----~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 558 (625)
...++..|+|||.+ .+..++.++||||||+++|||+||+.||...... ...... ........ .
T Consensus 168 ~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-~~~~~~----~~~~~~~~------~-- 234 (290)
T 3fme_A 168 IDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTP-FQQLKQ----VVEEPSPQ------L-- 234 (290)
T ss_dssp --CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCH-HHHHHH----HHHSCCCC------C--
T ss_pred ccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCch-HHHHHH----HhccCCCC------c--
Confidence 34688899999996 5667899999999999999999999999753321 111111 11111000 0
Q ss_pred CCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006922 559 YPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR 592 (625)
Q Consensus 559 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 592 (625)
+ ......++.+++.+|++.||++|||+.|+++
T Consensus 235 -~-~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 235 -P-ADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp -C-TTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred -c-cccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 0 0112235778888999999999999999987
No 225
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=6.3e-38 Score=332.08 Aligned_cols=252 Identities=19% Similarity=0.286 Sum_probs=186.5
Q ss_pred hHcccCCceeEEEEEE-cCCcEEEEEEeccccCChHHHHHHHHHHHcCCCCceecceeEEEec-----------------
Q 006922 330 EVLGKGTFGMAYKAIL-EDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYYSK----------------- 391 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~----------------- 391 (625)
+.||+|+||+||+|.. .+|+.||||++.... ....+|+++++.++||||+++++++...
T Consensus 13 ~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~---~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~ 89 (383)
T 3eb0_A 13 KTLGTGSFGIVCEVFDIESGKRFALKKVLQDP---RYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPPDDHNKL 89 (383)
T ss_dssp EEEECC-CEEEEEEEETTTCCEEEEEEEECCT---TSCCHHHHHHTTCCCTTBCCEEEEEEEC-----------------
T ss_pred EEEEeccCEEEEEEEECCCCCEEEEEEEecCc---chHHHHHHHHHHcCCCCccchhheeeecCcccccccccccccccc
Confidence 5799999999999995 579999999987542 2345799999999999999999998543
Q ss_pred ---------------------CceEEEEEeccCCChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCcee
Q 006922 392 ---------------------DEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVH 450 (625)
Q Consensus 392 ---------------------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH 450 (625)
...++||||++ |+|.+.+..... ....+++..+..++.|+++||+|||+.+ |+|
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~g---i~H 164 (383)
T 3eb0_A 90 GGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIR-SGRSIPMNLISIYIYQLFRAVGFIHSLG---ICH 164 (383)
T ss_dssp --------------------CCEEEEEECCCS-EEHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHTTT---EEC
T ss_pred cccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCc---Ccc
Confidence 23789999999 488777764321 1235899999999999999999999998 999
Q ss_pred cCCCCCCEEeC-CCCCeeEeccccccccccc--ccccccCCCcCCccccCCC-CCCCccchhhhHHHHHHHHhCCCCCCC
Q 006922 451 GNIKSSNIFLN-SQQYGCVSDLGLTTITSAL--APVIARAAGYRAPEVTDSR-KATQASDVYSFGVVLLEILTGKSPIHT 526 (625)
Q Consensus 451 rDlk~~NIll~-~~~~~kl~DfGla~~~~~~--~~~~~~~~~y~aPE~~~~~-~~~~~~DvwS~Gvil~elltG~~p~~~ 526 (625)
|||||+|||++ .++.+||+|||+++..... .....++..|+|||.+.+. .++.++||||+||++|||++|+.||.+
T Consensus 165 ~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 244 (383)
T 3eb0_A 165 RDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSG 244 (383)
T ss_dssp SCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred CccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCCCCCC
Confidence 99999999998 6889999999999876432 2344678889999998764 489999999999999999999999986
Q ss_pred CCCcchhhHHHHHHHHhhcccccc-------cccccccC--CCC-----cHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006922 527 TGGDELVHLVRWVHSVVREEWTAE-------VFDVELLR--YPN-----IEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR 592 (625)
Q Consensus 527 ~~~~~~~~~~~~~~~~~~~~~~~~-------~~d~~~~~--~~~-----~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 592 (625)
....+.. ...+. ......... ..+..... ... ......++.+++.+||+.||.+|||+.|+++
T Consensus 245 ~~~~~~~--~~i~~-~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 321 (383)
T 3eb0_A 245 ETSIDQL--VRIIQ-IMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMA 321 (383)
T ss_dssp SSHHHHH--HHHHH-HHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred CChHHHH--HHHHH-HhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 5433222 11111 100000000 00000000 000 0112235778888999999999999999985
No 226
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=1.6e-37 Score=318.09 Aligned_cols=239 Identities=21% Similarity=0.328 Sum_probs=188.1
Q ss_pred hHcccCCceeEEEEEE-cCCcEEEEEEecccc-----CChHHHHHHHHHHHcCCCCceecceeEEEe--cCceEEEEEec
Q 006922 330 EVLGKGTFGMAYKAIL-EDGTTVVVKRLKDVN-----VGKRDFEQQMEIVGSIRHENVVELKAYYYS--KDEKLMVYDYY 401 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~-----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~lv~e~~ 401 (625)
+.||+|+||.||++.. .+++.||+|+++... ...+.+.+|++++.+++||||+++++++.. .+..++||||+
T Consensus 11 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~ 90 (305)
T 2wtk_C 11 DLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYC 90 (305)
T ss_dssp CEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEEEEEECC
T ss_pred eEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEEEEehhc
Confidence 5699999999999996 468999999997542 224678999999999999999999999853 45789999999
Q ss_pred cCCChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEeccccccccccc-
Q 006922 402 SLGSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSAL- 480 (625)
Q Consensus 402 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~- 480 (625)
+++ +.+++..... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 91 ~~~-l~~~~~~~~~---~~~~~~~~~~~~~qi~~al~~LH~~~---i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~ 163 (305)
T 2wtk_C 91 VCG-MQEMLDSVPE---KRFPVCQAHGYFCQLIDGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFA 163 (305)
T ss_dssp SEE-HHHHHHHSTT---CSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEECCTTC
T ss_pred cCC-HHHHHHhCcc---cccCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCcccEEEcCCCcEEeeccccccccCccc
Confidence 987 6666665432 24899999999999999999999998 999999999999999999999999999875421
Q ss_pred ----ccccccCCCcCCccccCCCC--CCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccccccc
Q 006922 481 ----APVIARAAGYRAPEVTDSRK--ATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDV 554 (625)
Q Consensus 481 ----~~~~~~~~~y~aPE~~~~~~--~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 554 (625)
.....++..|+|||++.+.. ++.++||||||+++|||++|+.||......+. ...+. ....
T Consensus 164 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~---~~~i~---~~~~------- 230 (305)
T 2wtk_C 164 ADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKL---FENIG---KGSY------- 230 (305)
T ss_dssp SSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH---HHHHH---HCCC-------
T ss_pred cccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHH---HHHHh---cCCC-------
Confidence 12345788899999987644 37799999999999999999999976432221 11111 1100
Q ss_pred cccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006922 555 ELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRV 593 (625)
Q Consensus 555 ~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 593 (625)
+........+.+++.+||..||.+|||+.|+++.
T Consensus 231 -----~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 231 -----AIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp -----CCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred -----CCCCccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 0011122356778889999999999999999963
No 227
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=7.7e-38 Score=332.48 Aligned_cols=259 Identities=22% Similarity=0.339 Sum_probs=189.5
Q ss_pred hHcccCCceeEEEEEEcCCcEEEEEEeccccCChHHHHHHHHHHHcCCCCceecceeEEEecCc------eEEEEEeccC
Q 006922 330 EVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYYSKDE------KLMVYDYYSL 403 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~------~~lv~e~~~~ 403 (625)
+.||+|+||+||+|....+..||+|++.... +...+|+++++.++||||+++++++...+. .++||||+++
T Consensus 46 ~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~---~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~e~~~~ 122 (394)
T 4e7w_A 46 KVIGNGSFGVVFQAKLVESDEVAIKKVLQDK---RFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPE 122 (394)
T ss_dssp EEEEEETTEEEEEEEETTTEEEEEEEEECCT---TSCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEEECCSE
T ss_pred EEEeeCCCeEEEEEEECCCCeEEEEEEecCc---chHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEeeccCc
Confidence 5799999999999998777779999886532 223479999999999999999999976543 7899999998
Q ss_pred CChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeC-CCCCeeEeccccccccccc--
Q 006922 404 GSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLN-SQQYGCVSDLGLTTITSAL-- 480 (625)
Q Consensus 404 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~-~~~~~kl~DfGla~~~~~~-- 480 (625)
+.+........ ....+++..+..++.|+++||+|||+.+ |+||||||+|||++ .++.+||+|||+++.....
T Consensus 123 ~l~~~~~~~~~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~~~~ 197 (394)
T 4e7w_A 123 TVYRASRHYAK--LKQTMPMLLIKLYMYQLLRSLAYIHSIG---ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEP 197 (394)
T ss_dssp EHHHHHHHHHH--TTSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEETTTTEEEECCCTTCEECCTTCC
T ss_pred cHHHHHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHEEEcCCCCcEEEeeCCCcccccCCCC
Confidence 55444332221 1224899999999999999999999998 99999999999999 7899999999999876332
Q ss_pred ccccccCCCcCCccccCCC-CCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHH----------hhccccc
Q 006922 481 APVIARAAGYRAPEVTDSR-KATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSV----------VREEWTA 549 (625)
Q Consensus 481 ~~~~~~~~~y~aPE~~~~~-~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~----------~~~~~~~ 549 (625)
.....+|..|+|||++.+. .++.++||||+||++|||++|+.||.+....+.. ...+... .......
T Consensus 198 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l--~~i~~~~g~p~~~~~~~~~~~~~~ 275 (394)
T 4e7w_A 198 NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQL--VEIIKVLGTPSREQIKTMNPNYME 275 (394)
T ss_dssp CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH--HHHHHHHCCCCHHHHHHHCGGGSS
T ss_pred CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH--HHHHHHhCCCCHHHHHhhChhhhh
Confidence 2345678889999998654 5899999999999999999999999865432221 1111110 0000000
Q ss_pred ccccccccCCC----CcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH--HHhhCC
Q 006922 550 EVFDVELLRYP----NIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRV--IENVRP 599 (625)
Q Consensus 550 ~~~d~~~~~~~----~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~--L~~~~~ 599 (625)
..+. .....+ .......++.+++.+||+.||.+|||+.|+++. +++++.
T Consensus 276 ~~~~-~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~ 330 (394)
T 4e7w_A 276 HKFP-QIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDELRT 330 (394)
T ss_dssp SCCC-CCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTTTS
T ss_pred hccc-cccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhhhcc
Confidence 0000 000000 000122467788889999999999999999873 555543
No 228
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=7.1e-38 Score=328.58 Aligned_cols=265 Identities=18% Similarity=0.264 Sum_probs=183.9
Q ss_pred hHcccCCceeEEEEEEc-CCcEEEEEEeccccCChHHHHHHHHHHHcCCCCceecceeEEEecCc-------eEEEEEec
Q 006922 330 EVLGKGTFGMAYKAILE-DGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYYSKDE-------KLMVYDYY 401 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~-------~~lv~e~~ 401 (625)
+.||+|+||+||+|... +|+.||||++.........+.++++.+..++||||+++++++...+. .++||||+
T Consensus 29 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~~lv~e~~ 108 (360)
T 3e3p_A 29 RMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYV 108 (360)
T ss_dssp ----------CEEEEETTTCCEEEEEEEECCTTCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCEEEEEEEECC
T ss_pred EEEecCCCeEEEEEEECCCCCEEEEEEEecCccccHHHHHHHHHHHhcCCCCcccHHHhhhccccccccceeEEEEeecc
Confidence 57999999999999964 68999999997655555677888888999999999999999976543 78999999
Q ss_pred cCCChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHH--hcCCCCceecCCCCCCEEeCC-CCCeeEeccccccccc
Q 006922 402 SLGSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIH--AANGGKLVHGNIKSSNIFLNS-QQYGCVSDLGLTTITS 478 (625)
Q Consensus 402 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH--~~~~~~ivHrDlk~~NIll~~-~~~~kl~DfGla~~~~ 478 (625)
++ +|...+..... ....+++..+..++.|++.||+||| +.+ |+||||||+|||++. ++.+||+|||+++...
T Consensus 109 ~~-~l~~~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~~~~---ivH~Dlkp~NIll~~~~~~~kl~Dfg~a~~~~ 183 (360)
T 3e3p_A 109 PD-TLHRCCRNYYR-RQVAPPPILIKVFLFQLIRSIGCLHLPSVN---VCHRDIKPHNVLVNEADGTLKLCDFGSAKKLS 183 (360)
T ss_dssp SC-BHHHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHTSTTTC---CBCSCCCGGGEEEETTTTEEEECCCTTCBCCC
T ss_pred cc-cHHHHHHHHhh-cccCCCHHHHHHHHHHHHHHHHHHhCCCCC---eecCcCCHHHEEEeCCCCcEEEeeCCCceecC
Confidence 87 44444332211 1234889999999999999999999 776 999999999999997 8999999999998765
Q ss_pred ccc--cccccCCCcCCccccCCC-CCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHH---------HHHhhcc
Q 006922 479 ALA--PVIARAAGYRAPEVTDSR-KATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWV---------HSVVREE 546 (625)
Q Consensus 479 ~~~--~~~~~~~~y~aPE~~~~~-~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~---------~~~~~~~ 546 (625)
... ....+|..|+|||++.+. .++.++|||||||++|||++|+.||......+....+... .......
T Consensus 184 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (360)
T 3e3p_A 184 PSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSH 263 (360)
T ss_dssp TTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC
T ss_pred CCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCHHHHHhcccch
Confidence 432 234678889999998654 4899999999999999999999999875433222211110 0000000
Q ss_pred ccccccccccc-----CCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHHhhCC
Q 006922 547 WTAEVFDVELL-----RYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR--VIENVRP 599 (625)
Q Consensus 547 ~~~~~~d~~~~-----~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~--~L~~~~~ 599 (625)
......+.... ..........++.+++.+||+.||.+|||+.|+++ .++++..
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~ 323 (360)
T 3e3p_A 264 TDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELHD 323 (360)
T ss_dssp CCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGGGC
T ss_pred hhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCccccccCC
Confidence 00000000000 00001113456788889999999999999999986 3555543
No 229
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=6.5e-38 Score=319.91 Aligned_cols=241 Identities=19% Similarity=0.325 Sum_probs=193.9
Q ss_pred hHcccCCceeEEEEEEc-CCcEEEEEEeccccC----------ChHHHHHHHHHHHcCC-CCceecceeEEEecCceEEE
Q 006922 330 EVLGKGTFGMAYKAILE-DGTTVVVKRLKDVNV----------GKRDFEQQMEIVGSIR-HENVVELKAYYYSKDEKLMV 397 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~----------~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv 397 (625)
+.||+|+||+||+|... +|+.||||+++.... ..+.+.+|++++.+++ ||||+++++++...+..++|
T Consensus 23 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~lv 102 (298)
T 1phk_A 23 EILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLV 102 (298)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred eeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeeccCCeEEEE
Confidence 56999999999999965 689999999975431 1245778999999995 99999999999999999999
Q ss_pred EEeccCCChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEecccccccc
Q 006922 398 YDYYSLGSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTIT 477 (625)
Q Consensus 398 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~ 477 (625)
|||+++++|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++...
T Consensus 103 ~e~~~~~~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~ 174 (298)
T 1phk_A 103 FDLMKKGELFDYLTEKV-----TLSEKETRKIMRALLEVICALHKLN---IVHRDLKPENILLDDDMNIKLTDFGFSCQL 174 (298)
T ss_dssp EECCTTCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EeccCCCcHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEEcCCCcEEEecccchhhc
Confidence 99999999999997643 4899999999999999999999998 999999999999999999999999999876
Q ss_pred ccc--ccccccCCCcCCccccC------CCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhccccc
Q 006922 478 SAL--APVIARAAGYRAPEVTD------SRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTA 549 (625)
Q Consensus 478 ~~~--~~~~~~~~~y~aPE~~~------~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 549 (625)
... .....++..|+|||.+. ...++.++||||||+++|||++|+.||......+.. .. .......
T Consensus 175 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~---~~---~~~~~~~- 247 (298)
T 1phk_A 175 DPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLML---RM---IMSGNYQ- 247 (298)
T ss_dssp CTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH---HH---HHHTCCC-
T ss_pred CCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHH---HH---HhcCCcc-
Confidence 432 22346788899999874 456889999999999999999999999764332211 11 1111100
Q ss_pred ccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006922 550 EVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR 592 (625)
Q Consensus 550 ~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 592 (625)
. ..+.......++.+++.+||+.||.+|||+.|+++
T Consensus 248 -~------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 248 -F------GSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp -C------CTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred -c------CcccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 0 00111122346778888999999999999999975
No 230
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=7.6e-38 Score=335.29 Aligned_cols=260 Identities=23% Similarity=0.312 Sum_probs=188.9
Q ss_pred hHcccCCceeEEEEEEc-CCcEEEEEEeccccCChHHHHHHHHHHHcCCCCceecceeEEEecC------ceEEEEEecc
Q 006922 330 EVLGKGTFGMAYKAILE-DGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYYSKD------EKLMVYDYYS 402 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------~~~lv~e~~~ 402 (625)
+.||+|+||+||+|... +|+.||||++.... +...+|++++++++|||||++++++.... ..++||||++
T Consensus 60 ~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~---~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~e~~~ 136 (420)
T 1j1b_A 60 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK---RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP 136 (420)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEECCT---TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEEEECCC
T ss_pred eEEeeCCCEEEEEEEECCCCcEEEEEEecccc---hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEeehhccc
Confidence 57999999999999975 69999999987532 33457999999999999999999986532 3578999998
Q ss_pred CCChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCC-CCeeEeccccccccccc-
Q 006922 403 LGSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQ-QYGCVSDLGLTTITSAL- 480 (625)
Q Consensus 403 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~-~~~kl~DfGla~~~~~~- 480 (625)
+ ++.+.+..... ....+++..+..++.|+++||+|||+.+ |+||||||+|||++.+ +.+||+|||+++.....
T Consensus 137 ~-~l~~~~~~~~~-~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~~~~ 211 (420)
T 1j1b_A 137 E-TVYRVARHYSR-AKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 211 (420)
T ss_dssp E-EHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCSGGGEEEETTTTEEEECCCTTCEECCTTC
T ss_pred c-cHHHHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChhhEEEeCCCCeEEeccchhhhhcccCC
Confidence 6 56555543211 1235899999999999999999999998 9999999999999965 56899999999875432
Q ss_pred -ccccccCCCcCCccccCCC-CCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHH-------hhcc--ccc
Q 006922 481 -APVIARAAGYRAPEVTDSR-KATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSV-------VREE--WTA 549 (625)
Q Consensus 481 -~~~~~~~~~y~aPE~~~~~-~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~-------~~~~--~~~ 549 (625)
.....+|..|+|||++.+. .++.++|||||||++|||++|+.||.+....+ .+.+.+... +... ...
T Consensus 212 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~--~l~~i~~~lg~p~~~~~~~~~~~~~ 289 (420)
T 1j1b_A 212 PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD--QLVEIIKVLGTPTREQIREMNPNYT 289 (420)
T ss_dssp CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHHHHCSCCHHHHHHHCSCCC
T ss_pred CceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHHhCCCCHHHHHhhChhhh
Confidence 2335678899999998664 78999999999999999999999997654322 222222110 0000 000
Q ss_pred ccccccccCCC----CcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHHhhCC
Q 006922 550 EVFDVELLRYP----NIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR--VIENVRP 599 (625)
Q Consensus 550 ~~~d~~~~~~~----~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~--~L~~~~~ 599 (625)
+...+.....+ .......++.+++.+||..||.+||++.|+++ .++++..
T Consensus 290 ~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~f~~~~~ 345 (420)
T 1j1b_A 290 EFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRD 345 (420)
T ss_dssp CCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGGGC
T ss_pred hhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCHhhccccc
Confidence 00000000000 00111246778888999999999999999986 4555543
No 231
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=6.5e-38 Score=337.17 Aligned_cols=186 Identities=20% Similarity=0.326 Sum_probs=158.8
Q ss_pred hHcccCCceeEEEEEEc-CCcEEEEEEeccccCC---hHHHHHHHHHHHcCCCCceecceeEEEec-----CceEEEEEe
Q 006922 330 EVLGKGTFGMAYKAILE-DGTTVVVKRLKDVNVG---KRDFEQQMEIVGSIRHENVVELKAYYYSK-----DEKLMVYDY 400 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~~~lv~e~ 400 (625)
+.||+|+||+||+|... +|+.||||+++..... .+.+.+|++++.+++||||+++++++... +..++||||
T Consensus 32 ~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv~e~ 111 (432)
T 3n9x_A 32 HLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEI 111 (432)
T ss_dssp EEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEEEC
T ss_pred EEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeEEEEEec
Confidence 57999999999999954 6889999999864333 35688999999999999999999999776 568999999
Q ss_pred ccCCChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEeccccccccccc
Q 006922 401 YSLGSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSAL 480 (625)
Q Consensus 401 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~ 480 (625)
++ |+|.+++.... .+++..+..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 112 ~~-~~L~~~~~~~~-----~l~~~~~~~i~~qil~aL~~LH~~g---ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~ 182 (432)
T 3n9x_A 112 AD-SDLKKLFKTPI-----FLTEEHIKTILYNLLLGENFIHESG---IIHRDLKPANCLLNQDCSVKVCDFGLARTINSE 182 (432)
T ss_dssp CS-EEHHHHHHSSC-----CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEEC---
T ss_pred CC-cCHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHCC---CCCCCCCHHHeEECCCCCEEEccCCCccccccc
Confidence 87 59999987542 4899999999999999999999998 999999999999999999999999999876432
Q ss_pred -------------------------ccccccCCCcCCcccc-CCCCCCCccchhhhHHHHHHHHhCCCCC
Q 006922 481 -------------------------APVIARAAGYRAPEVT-DSRKATQASDVYSFGVVLLEILTGKSPI 524 (625)
Q Consensus 481 -------------------------~~~~~~~~~y~aPE~~-~~~~~~~~~DvwS~Gvil~elltG~~p~ 524 (625)
.....+|..|+|||++ ....++.++||||+||++|||++|..||
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~ 252 (432)
T 3n9x_A 183 KDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSH 252 (432)
T ss_dssp ----------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTT
T ss_pred ccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhccccc
Confidence 1345678899999986 5667999999999999999999855444
No 232
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=1.3e-37 Score=322.00 Aligned_cols=253 Identities=19% Similarity=0.281 Sum_probs=191.7
Q ss_pred hHcccCCceeEEEEEE--cCCcEEEEEEeccccC---ChHHHHHHHHHHHcC---CCCceecceeEEE-----ecCceEE
Q 006922 330 EVLGKGTFGMAYKAIL--EDGTTVVVKRLKDVNV---GKRDFEQQMEIVGSI---RHENVVELKAYYY-----SKDEKLM 396 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~--~~g~~vavK~l~~~~~---~~~~~~~e~~~l~~l---~h~niv~l~~~~~-----~~~~~~l 396 (625)
+.||+|+||+||+|.. .+|+.||+|+++.... ....+.+|++++..+ +||||+++++++. .....++
T Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~l 96 (326)
T 1blx_A 17 AEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTL 96 (326)
T ss_dssp EEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEEEEE
T ss_pred eeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCCCceEEE
Confidence 5699999999999996 4688999999975432 234677788777666 8999999999987 4567899
Q ss_pred EEEeccCCChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEeccccccc
Q 006922 397 VYDYYSLGSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTI 476 (625)
Q Consensus 397 v~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~ 476 (625)
||||++ |+|.+++..... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.
T Consensus 97 v~e~~~-~~L~~~l~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~g---i~H~dlkp~Nili~~~~~~kl~Dfg~~~~ 169 (326)
T 1blx_A 97 VFEHVD-QDLTTYLDKVPE---PGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARI 169 (326)
T ss_dssp EEECCS-CBHHHHHHHSCT---TCSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECSCCSCCC
T ss_pred EEecCC-CCHHHHHHhccc---CCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCCHHHeEEcCCCCEEEecCccccc
Confidence 999998 699999876532 24899999999999999999999998 99999999999999999999999999987
Q ss_pred cccc--ccccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhh----cccccc
Q 006922 477 TSAL--APVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVR----EEWTAE 550 (625)
Q Consensus 477 ~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 550 (625)
.... .....++..|+|||.+.+..++.++|||||||++|||++|+.||......+.. ..+..... ..+...
T Consensus 170 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~---~~i~~~~~~~~~~~~~~~ 246 (326)
T 1blx_A 170 YSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQL---GKILDVIGLPGEEDWPRD 246 (326)
T ss_dssp CCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH---HHHHHHHCCCCGGGSCTT
T ss_pred ccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHH---HHHHHHcCCCCcccCccc
Confidence 6432 23346788899999999889999999999999999999999999765432221 11111111 111110
Q ss_pred ccccc--ccC--CC----CcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006922 551 VFDVE--LLR--YP----NIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR 592 (625)
Q Consensus 551 ~~d~~--~~~--~~----~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 592 (625)
...+. ... .. ........+.+++.+||..||++|||+.|+++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 247 VALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp CSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred cccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 00000 000 00 00112235667888999999999999999985
No 233
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=1.5e-37 Score=334.39 Aligned_cols=244 Identities=20% Similarity=0.286 Sum_probs=183.5
Q ss_pred hHcccCCceeEEEEEEcCCcEEEEEEeccccCChHHHHHHHHHHHcC-CCCceecceeEEEecCceEEEEEeccCCChhh
Q 006922 330 EVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSI-RHENVVELKAYYYSKDEKLMVYDYYSLGSVSA 408 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~ 408 (625)
++||+|+||+||.+...+|+.||||++.... .+.+.+|++++.++ +|||||++++++.+.+..++||||+. |+|.+
T Consensus 21 ~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~--~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-gsL~~ 97 (434)
T 2rio_A 21 KILGYGSSGTVVFQGSFQGRPVAVKRMLIDF--CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-LNLQD 97 (434)
T ss_dssp EEEEECSTTCEEEEEESSSSEEEEEEEEGGG--HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-EEHHH
T ss_pred CeEeeCCCeEEEEEEEECCeEEEEEEEcHHH--HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-CCHHH
Confidence 5699999999987777789999999987532 35678999999876 89999999999999999999999996 69999
Q ss_pred hhccccCCCC--ccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCC-------------CCeeEecccc
Q 006922 409 MLHSERGEGR--IPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQ-------------QYGCVSDLGL 473 (625)
Q Consensus 409 ~l~~~~~~~~--~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~-------------~~~kl~DfGl 473 (625)
++........ ...++..+..++.|++.||+|||+.+ |+||||||+|||++.+ +.+||+|||+
T Consensus 98 ~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG~ 174 (434)
T 2rio_A 98 LVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 174 (434)
T ss_dssp HHHTC------------CCHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCTT
T ss_pred HHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEecCcccccccccCCCceEEEEccccc
Confidence 9976532111 01133456789999999999999998 9999999999999754 4899999999
Q ss_pred cccccccc-------cccccCCCcCCccccCC-------CCCCCccchhhhHHHHHHHHh-CCCCCCCCCCcchhhHHHH
Q 006922 474 TTITSALA-------PVIARAAGYRAPEVTDS-------RKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRW 538 (625)
Q Consensus 474 a~~~~~~~-------~~~~~~~~y~aPE~~~~-------~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~ 538 (625)
++...... ....||.+|+|||++.+ ..++.++|||||||++|||+| |+.||......+ . ..
T Consensus 175 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~-~---~i 250 (434)
T 2rio_A 175 CKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE-S---NI 250 (434)
T ss_dssp CEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH-H---HH
T ss_pred ceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhH-H---HH
Confidence 98765321 23468899999999865 678999999999999999999 999997543222 1 11
Q ss_pred HHHHhhcccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006922 539 VHSVVREEWTAEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR 592 (625)
Q Consensus 539 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 592 (625)
. ... .+..............++.+++.+||+.||.+|||+.|+++
T Consensus 251 ~----~~~-----~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 251 I----RGI-----FSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp H----HTC-----CCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred h----cCC-----CCcccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 1 111 11000011123345567888999999999999999999985
No 234
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=2.3e-37 Score=316.08 Aligned_cols=240 Identities=23% Similarity=0.359 Sum_probs=184.2
Q ss_pred hHcccCCceeEEEEEE-cCCcEEEEEEeccccCChHHHHHHHHHHHcCCCCceecceeEEEe-------------cCceE
Q 006922 330 EVLGKGTFGMAYKAIL-EDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYYS-------------KDEKL 395 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-------------~~~~~ 395 (625)
+.||+|+||+||+|.. .+|+.||||+++......+.+.+|++++.+++||||+++++++.+ .+..+
T Consensus 12 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (303)
T 1zy4_A 12 AVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLF 91 (303)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEEEHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC------CEEEEE
T ss_pred heeccCCcEEEEEEEEcCCCeEEEEEEEeccHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcccccCCceE
Confidence 5799999999999996 479999999997654445678999999999999999999998865 34678
Q ss_pred EEEEeccCCChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEecccccc
Q 006922 396 MVYDYYSLGSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTT 475 (625)
Q Consensus 396 lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~ 475 (625)
+||||+++|+|.+++.... ..+++..+..++.|+++||+|||+++ |+||||||+||+++.++.+||+|||+++
T Consensus 92 lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~ 164 (303)
T 1zy4_A 92 IQMEYCENGTLYDLIHSEN----LNQQRDEYWRLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAK 164 (303)
T ss_dssp EEEECCCSCBHHHHHHHSC----GGGCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECCCCCCS
T ss_pred EEEecCCCCCHHHhhhccc----cccchHHHHHHHHHHHHHHHHHHhCC---eecccCCHHhEEEcCCCCEEEeeCcchh
Confidence 9999999999999997532 24788999999999999999999998 9999999999999999999999999997
Q ss_pred ccccc-----------------ccccccCCCcCCccccCCC-CCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHH
Q 006922 476 ITSAL-----------------APVIARAAGYRAPEVTDSR-KATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVR 537 (625)
Q Consensus 476 ~~~~~-----------------~~~~~~~~~y~aPE~~~~~-~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~ 537 (625)
..... .....++..|+|||.+.+. .++.++|||||||++|||++ ||... .+......
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~--~~~~~~~~ 239 (303)
T 1zy4_A 165 NVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTG--MERVNILK 239 (303)
T ss_dssp CTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSH--HHHHHHHH
T ss_pred hcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCc--hhHHHHHH
Confidence 65321 1233577889999998754 78999999999999999998 55321 11111111
Q ss_pred HHHHHhhcccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006922 538 WVHSVVREEWTAEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR 592 (625)
Q Consensus 538 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 592 (625)
.+. ... ..+.+ .........+.+++.+||+.||.+|||+.|+++
T Consensus 240 ~~~---~~~---~~~~~-----~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 283 (303)
T 1zy4_A 240 KLR---SVS---IEFPP-----DFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN 283 (303)
T ss_dssp HHH---STT---CCCCT-----TCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred hcc---ccc---cccCc-----cccccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence 111 100 00000 011122345677888999999999999999986
No 235
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=1.1e-37 Score=324.19 Aligned_cols=244 Identities=18% Similarity=0.264 Sum_probs=166.6
Q ss_pred hHcccCCceeEEEEEEc-CCcEEEEEEeccccCChHHHHHHHHHHHcCCCCceecceeEEEe----cCceEEEEEeccCC
Q 006922 330 EVLGKGTFGMAYKAILE-DGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYYS----KDEKLMVYDYYSLG 404 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~~lv~e~~~~g 404 (625)
++||+|+||+||+|... +|+.||||++.... ....+....+..++||||+++++++.. ....++||||+++|
T Consensus 35 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~gg 111 (336)
T 3fhr_A 35 QVLGLGVNGKVLECFHRRTGQKCALKLLYDSP---KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGG 111 (336)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEESSH---HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCTTE
T ss_pred eeeeeCCCeEEEEEEECCCCCEEEEEEecCcH---HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEEEeccCCC
Confidence 46999999999999965 69999999997532 222233344566799999999999976 34579999999999
Q ss_pred ChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCC---CCeeEeccccccccccc-
Q 006922 405 SVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQ---QYGCVSDLGLTTITSAL- 480 (625)
Q Consensus 405 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~---~~~kl~DfGla~~~~~~- 480 (625)
+|.+++..... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.+ +.+||+|||+++.....
T Consensus 112 ~L~~~l~~~~~---~~l~~~~~~~i~~ql~~~l~~LH~~~---ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~~~ 185 (336)
T 3fhr_A 112 ELFSRIQERGD---QAFTEREAAEIMRDIGTAIQFLHSHN---IAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNA 185 (336)
T ss_dssp EHHHHHHTC-C---CCCBHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSTTCCEEECCCTTCEEC----
T ss_pred CHHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEEecCCCceEEEeccccceeccccc
Confidence 99999986432 35899999999999999999999998 9999999999999864 45999999999866432
Q ss_pred ccccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccccccccccCCC
Q 006922 481 APVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYP 560 (625)
Q Consensus 481 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 560 (625)
.....++..|+|||++.+..++.++||||||+++|||++|+.||............. ..+... .... ..+
T Consensus 186 ~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~---~~~~~~----~~~~---~~~ 255 (336)
T 3fhr_A 186 LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMK---RRIRLG----QYGF---PNP 255 (336)
T ss_dssp ------------------CHHHHHHHHHHHHHHHHHHHHSSCCC----------------------------CC---CTT
T ss_pred cccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHH---Hhhhcc----cccc---Cch
Confidence 233467888999999988889999999999999999999999997654332211100 000000 0000 001
Q ss_pred CcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006922 561 NIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR 592 (625)
Q Consensus 561 ~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 592 (625)
.......++.+++.+|++.||.+|||+.|+++
T Consensus 256 ~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 287 (336)
T 3fhr_A 256 EWSEVSEDAKQLIRLLLKTDPTERLTITQFMN 287 (336)
T ss_dssp TSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred hhccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 11122345677888999999999999999997
No 236
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=4.4e-37 Score=312.23 Aligned_cols=246 Identities=22% Similarity=0.309 Sum_probs=195.7
Q ss_pred HhHcccCCceeEEEEEEc-CCcEEEEEEecccc---CChHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccCC
Q 006922 329 AEVLGKGTFGMAYKAILE-DGTTVVVKRLKDVN---VGKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLG 404 (625)
Q Consensus 329 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 404 (625)
.+.||+|+||+||+|... +++.||+|++.... ...+.+.+|++++.+++||||+++++++...+..++||||++++
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 106 (287)
T 2wei_A 27 VCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGG 106 (287)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred eEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEEEccCCC
Confidence 357999999999999965 68999999997543 23467899999999999999999999999999999999999999
Q ss_pred ChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCC---CCeeEecccccccccccc
Q 006922 405 SVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQ---QYGCVSDLGLTTITSALA 481 (625)
Q Consensus 405 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~---~~~kl~DfGla~~~~~~~ 481 (625)
+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.+ +.+||+|||++.......
T Consensus 107 ~L~~~l~~~~-----~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~ 178 (287)
T 2wei_A 107 ELFDEIIKRK-----RFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT 178 (287)
T ss_dssp BHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCS
T ss_pred CHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCChhhEEEecCCCcccEEEeccCcceeecCCC
Confidence 9999887543 3899999999999999999999998 9999999999999764 469999999998764332
Q ss_pred --cccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccccccccccCC
Q 006922 482 --PVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRY 559 (625)
Q Consensus 482 --~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 559 (625)
....++..|+|||.+.+ .++.++||||||+++|||++|+.||......+.. ..+ ...... .+ ...
T Consensus 179 ~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~---~~~---~~~~~~---~~--~~~- 245 (287)
T 2wei_A 179 KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDIL---KRV---ETGKYA---FD--LPQ- 245 (287)
T ss_dssp SCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH---HHH---HHCCCC---CC--SGG-
T ss_pred ccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHH---HHH---HcCCCC---CC--chh-
Confidence 23356778999999876 4899999999999999999999999765432221 111 111100 00 000
Q ss_pred CCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHHhh
Q 006922 560 PNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR--VIENV 597 (625)
Q Consensus 560 ~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~--~L~~~ 597 (625)
......++.+++.+|+..||++|||+.|+++ .+++.
T Consensus 246 --~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~~~~~ 283 (287)
T 2wei_A 246 --WRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKY 283 (287)
T ss_dssp --GTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHHH
T ss_pred --hhhcCHHHHHHHHHHcccChhhCcCHHHHhcCHHHhcc
Confidence 0112235677888999999999999999997 45544
No 237
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=4.8e-38 Score=323.92 Aligned_cols=250 Identities=20% Similarity=0.289 Sum_probs=182.4
Q ss_pred hHcccCCceeEEEEEEc-CCcEEEEEEeccccC-ChHHHHHHHHHHHcCCCCceecceeEEE--------------ecCc
Q 006922 330 EVLGKGTFGMAYKAILE-DGTTVVVKRLKDVNV-GKRDFEQQMEIVGSIRHENVVELKAYYY--------------SKDE 393 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~--------------~~~~ 393 (625)
+.||+|+||+||+|... +|+.||+|++..... ..+.+.+|++++.+++||||+++++++. ..+.
T Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (320)
T 2i6l_A 17 KPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNS 96 (320)
T ss_dssp EECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----CCSCSE
T ss_pred EEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccccccccCc
Confidence 56999999999999965 589999999875432 2367889999999999999999999874 3357
Q ss_pred eEEEEEeccCCChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeC-CCCCeeEeccc
Q 006922 394 KLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLN-SQQYGCVSDLG 472 (625)
Q Consensus 394 ~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~-~~~~~kl~DfG 472 (625)
.++||||++ |+|.+++... .+++..+..++.|+++||+|||+.+ |+||||||+||+++ .++.+||+|||
T Consensus 97 ~~lv~e~~~-~~L~~~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~kl~Dfg 166 (320)
T 2i6l_A 97 VYIVQEYME-TDLANVLEQG------PLLEEHARLFMYQLLRGLKYIHSAN---VLHRDLKPANLFINTEDLVLKIGDFG 166 (320)
T ss_dssp EEEEEECCS-EEHHHHHTTC------CCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEEETTTTEEEECCCT
T ss_pred eeEEeeccC-CCHHHHhhcC------CccHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCeEEEccCc
Confidence 799999998 5999988642 3889999999999999999999998 99999999999997 56799999999
Q ss_pred cccccccc------ccccccCCCcCCccccCC-CCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhc
Q 006922 473 LTTITSAL------APVIARAAGYRAPEVTDS-RKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVRE 545 (625)
Q Consensus 473 la~~~~~~------~~~~~~~~~y~aPE~~~~-~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 545 (625)
+++..... .....++..|+|||.+.+ ..++.++||||||+++|||++|+.||......+....+ ......
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~---~~~~~~ 243 (320)
T 2i6l_A 167 LARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLI---LESIPV 243 (320)
T ss_dssp TCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH---HHHSCC
T ss_pred cccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHH---HHhcCC
Confidence 99875421 122346778999998765 67899999999999999999999999765432221111 110000
Q ss_pred ---ccccc-------cccccccCCCCc-----HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006922 546 ---EWTAE-------VFDVELLRYPNI-----EEEMVEMLQIAMSCVVRMPDQRPKMPDVVR 592 (625)
Q Consensus 546 ---~~~~~-------~~d~~~~~~~~~-----~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 592 (625)
+...+ ............ .....++.+++.+|++.||++|||+.|+++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (320)
T 2i6l_A 244 VHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS 305 (320)
T ss_dssp CCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred CchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence 00000 000000000000 011345778888999999999999999986
No 238
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=1.3e-37 Score=322.38 Aligned_cols=245 Identities=18% Similarity=0.285 Sum_probs=171.8
Q ss_pred hHcccCCceeEEEEEEc-CCcEEEEEEeccccCC--hHHHHHHHH-HHHcCCCCceecceeEEEecCceEEEEEeccCCC
Q 006922 330 EVLGKGTFGMAYKAILE-DGTTVVVKRLKDVNVG--KRDFEQQME-IVGSIRHENVVELKAYYYSKDEKLMVYDYYSLGS 405 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~--~~~~~~e~~-~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 405 (625)
+.||+|+||+||+|... +|+.||||+++..... ...+..|+. +++.++||||+++++++...+..++||||+++ +
T Consensus 28 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e~~~~-~ 106 (327)
T 3aln_A 28 GEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMST-S 106 (327)
T ss_dssp CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEECCCSE-E
T ss_pred heeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEeecCC-C
Confidence 56999999999999964 7899999999765322 244556665 67778999999999999999999999999986 7
Q ss_pred hhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhc-CCCCceecCCCCCCEEeCCCCCeeEecccccccccccc--c
Q 006922 406 VSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAA-NGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALA--P 482 (625)
Q Consensus 406 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~-~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~--~ 482 (625)
|.+++..........+++..+..++.|+++||+|||+. + |+||||||+||+++.++.+||+|||+++...... .
T Consensus 107 l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~---ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 183 (327)
T 3aln_A 107 FDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLK---IIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKT 183 (327)
T ss_dssp HHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHS---CCCSCCCGGGEEEETTTEEEECCCSSSCC--------
T ss_pred hHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCC---EeECCCCHHHEEEcCCCCEEEccCCCceecccccccc
Confidence 77777642222223589999999999999999999998 7 9999999999999999999999999998764322 2
Q ss_pred ccccCCCcCCcccc----CCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccccccccccC
Q 006922 483 VIARAAGYRAPEVT----DSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLR 558 (625)
Q Consensus 483 ~~~~~~~y~aPE~~----~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 558 (625)
...++..|+|||++ .+..++.++||||||+++|||++|+.||....... +.+ ..+.......
T Consensus 184 ~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-----~~~---------~~~~~~~~~~ 249 (327)
T 3aln_A 184 RDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVF-----DQL---------TQVVKGDPPQ 249 (327)
T ss_dssp ----------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC---------------------CCCCCSCCCC
T ss_pred cCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHH-----HHH---------HHHhcCCCCC
Confidence 23678889999998 45678999999999999999999999997533210 000 0011100000
Q ss_pred CC--CcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006922 559 YP--NIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR 592 (625)
Q Consensus 559 ~~--~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 592 (625)
.+ .......++.+++.+||..||++||++.|+++
T Consensus 250 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 250 LSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp CCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence 00 00112346778888999999999999999986
No 239
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.8e-37 Score=331.55 Aligned_cols=238 Identities=18% Similarity=0.268 Sum_probs=180.3
Q ss_pred hHcccCCceeEEEEEEcCCcEEEEEEeccccCChHHHHHHHHHHHcC-CCCceecceeEEEecCceEEEEEeccCCChhh
Q 006922 330 EVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSI-RHENVVELKAYYYSKDEKLMVYDYYSLGSVSA 408 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~ 408 (625)
++||+|+||+||.....+|+.||||++.... ...+.+|++++.++ +|||||++++++.+.+..++||||+. |+|.+
T Consensus 30 ~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~--~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~-g~L~~ 106 (432)
T 3p23_A 30 DVLGHGAEGTIVYRGMFDNRDVAVKRILPEC--FSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA-ATLQE 106 (432)
T ss_dssp EEEEECGGGCEEEEEESSSSEEEEEEECTTT--EEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS-EEHHH
T ss_pred CeeecCcCEEEEEEEEeCCeEEEEEEECHHH--HHHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC-CCHHH
Confidence 5799999999766556679999999997533 23467899999999 79999999999999999999999997 59999
Q ss_pred hhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCC-----CCCeeEeccccccccccc---
Q 006922 409 MLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNS-----QQYGCVSDLGLTTITSAL--- 480 (625)
Q Consensus 409 ~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~-----~~~~kl~DfGla~~~~~~--- 480 (625)
++..... .+.+..+..++.|++.||+|||+.+ |+||||||+|||++. ...+||+|||+++.....
T Consensus 107 ~l~~~~~----~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~~ 179 (432)
T 3p23_A 107 YVEQKDF----AHLGLEPITLLQQTTSGLAHLHSLN---IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHS 179 (432)
T ss_dssp HHHSSSC----CCCSSCHHHHHHHHHHHHHHHHHTT---CCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC------
T ss_pred HHHhcCC----CccchhHHHHHHHHHHHHHHHHHCc---CEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCcc
Confidence 9876542 2344456789999999999999998 999999999999953 235789999999876422
Q ss_pred ---ccccccCCCcCCccccC---CCCCCCccchhhhHHHHHHHHh-CCCCCCCCCCcchhhHHHHHHHHhhccccccccc
Q 006922 481 ---APVIARAAGYRAPEVTD---SRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFD 553 (625)
Q Consensus 481 ---~~~~~~~~~y~aPE~~~---~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 553 (625)
.....||..|+|||++. ...++.++|||||||++|||+| |+.||......... ...... ...
T Consensus 180 ~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~-------~~~~~~-~~~--- 248 (432)
T 3p23_A 180 FSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQAN-------ILLGAC-SLD--- 248 (432)
T ss_dssp ------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHH-------HHTTCC-CCT---
T ss_pred eeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHH-------HHhccC-Ccc---
Confidence 23356899999999987 4567889999999999999999 99999643322111 011110 000
Q ss_pred ccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006922 554 VELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR 592 (625)
Q Consensus 554 ~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 592 (625)
...........+.+++.+||+.||.+|||+.|+++
T Consensus 249 ----~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 249 ----CLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp ----TSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ----ccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 00111223345678888999999999999999983
No 240
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=1.8e-37 Score=324.62 Aligned_cols=250 Identities=20% Similarity=0.319 Sum_probs=189.4
Q ss_pred hHcccCCceeEEEEEEc-CCcEEEEEEeccccCC--hHHHHHHHHHHHcCCCCceecceeEEEec-----CceEEEEEec
Q 006922 330 EVLGKGTFGMAYKAILE-DGTTVVVKRLKDVNVG--KRDFEQQMEIVGSIRHENVVELKAYYYSK-----DEKLMVYDYY 401 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~--~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~~~lv~e~~ 401 (625)
+.||+|+||+||+|... +|+.||||+++..... ...+.+|++++.+++||||+++++++... ...++||||+
T Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~ 96 (353)
T 2b9h_A 17 SLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELM 96 (353)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEEEEECCC
T ss_pred eEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEEEEEecc
Confidence 56999999999999965 6899999999754322 35678999999999999999999998764 5789999999
Q ss_pred cCCChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEecccccccccccc
Q 006922 402 SLGSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALA 481 (625)
Q Consensus 402 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~ 481 (625)
. |+|.+++... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 97 ~-~~L~~~~~~~------~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~ 166 (353)
T 2b9h_A 97 Q-TDLHRVISTQ------MLSDDHIQYFIYQTLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESA 166 (353)
T ss_dssp S-EEHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCCTTCEECC---
T ss_pred C-ccHHHHHhhc------CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEEcCCCcEEEEeccccccccccc
Confidence 8 5899888753 3899999999999999999999998 9999999999999999999999999998754211
Q ss_pred -------------cccccCCCcCCccccC-CCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhccc
Q 006922 482 -------------PVIARAAGYRAPEVTD-SRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEW 547 (625)
Q Consensus 482 -------------~~~~~~~~y~aPE~~~-~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 547 (625)
....+|..|+|||++. +..++.++|||||||++|||++|+.||......+... .+........
T Consensus 167 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~---~~~~~~~~~~ 243 (353)
T 2b9h_A 167 ADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLL---LIFGIIGTPH 243 (353)
T ss_dssp -------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH---HHHHHHCCCC
T ss_pred ccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHH---HHHHHhCCCc
Confidence 1235688899999875 4678999999999999999999999997654322211 1111111000
Q ss_pred ----ccccccc-------cccCCC--Cc----HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006922 548 ----TAEVFDV-------ELLRYP--NI----EEEMVEMLQIAMSCVVRMPDQRPKMPDVVR 592 (625)
Q Consensus 548 ----~~~~~d~-------~~~~~~--~~----~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 592 (625)
....... .....+ .. .....++.+++.+||+.||++|||+.|+++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (353)
T 2b9h_A 244 SDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE 305 (353)
T ss_dssp STTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 0000000 000000 00 012245678888999999999999999986
No 241
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=7.2e-37 Score=314.68 Aligned_cols=239 Identities=17% Similarity=0.307 Sum_probs=187.0
Q ss_pred hHcccCCceeEEEEEEcCCcEEEEEEeccccCC---hHHHHHHHHHHHcCC--CCceecceeEEEecCceEEEEEeccCC
Q 006922 330 EVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVG---KRDFEQQMEIVGSIR--HENVVELKAYYYSKDEKLMVYDYYSLG 404 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~---~~~~~~e~~~l~~l~--h~niv~l~~~~~~~~~~~lv~e~~~~g 404 (625)
+.||+|+||.||++...+++.||||++...... .+.+.+|++++.+++ ||||+++++++...+..++||| +.++
T Consensus 34 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e-~~~~ 112 (313)
T 3cek_A 34 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNI 112 (313)
T ss_dssp EEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEEEC-CCSE
T ss_pred EEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEEEe-cCCC
Confidence 569999999999999888999999999765433 356889999999997 5999999999999999999999 6788
Q ss_pred ChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEecccccccccccc---
Q 006922 405 SVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALA--- 481 (625)
Q Consensus 405 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~--- 481 (625)
+|.+++.... .+++..+..++.|+++||+|||+.+ |+||||||+||++++ +.+||+|||+++......
T Consensus 113 ~L~~~l~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~~~~~~ 183 (313)
T 3cek_A 113 DLNSWLKKKK-----SIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTSV 183 (313)
T ss_dssp EHHHHHHHCS-----SCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEET-TEEEECCCSSSCC--------
T ss_pred cHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcccEEEEC-CeEEEeeccccccccCccccc
Confidence 9999997643 4899999999999999999999998 999999999999964 899999999998764322
Q ss_pred --cccccCCCcCCccccCC-----------CCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccc
Q 006922 482 --PVIARAAGYRAPEVTDS-----------RKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWT 548 (625)
Q Consensus 482 --~~~~~~~~y~aPE~~~~-----------~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 548 (625)
....++..|+|||.+.+ ..++.++||||||+++|||++|+.||...... .............
T Consensus 184 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~-----~~~~~~~~~~~~~ 258 (313)
T 3cek_A 184 VKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ-----ISKLHAIIDPNHE 258 (313)
T ss_dssp ------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSH-----HHHHHHHHCTTSC
T ss_pred cccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHH-----HHHHHHHHhcccc
Confidence 23457888999999865 46888999999999999999999999754321 1111111111110
Q ss_pred cccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006922 549 AEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRV 593 (625)
Q Consensus 549 ~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 593 (625)
. ... ... ..++.+++.+||..||.+||++.|+++.
T Consensus 259 ~-----~~~--~~~---~~~l~~li~~~l~~dp~~Rps~~ell~h 293 (313)
T 3cek_A 259 I-----EFP--DIP---EKDLQDVLKCCLKRDPKQRISIPELLAH 293 (313)
T ss_dssp C-----CCC--CCS---CHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred c-----CCc--ccc---hHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 0 000 111 2356778889999999999999999863
No 242
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=1.7e-37 Score=320.48 Aligned_cols=231 Identities=16% Similarity=0.336 Sum_probs=189.0
Q ss_pred hHcccCCceeEEEEEE-cCCcEEEEEEeccccCC-------hHHHHHHHHHHHcCC--CCceecceeEEEecCceEEEEE
Q 006922 330 EVLGKGTFGMAYKAIL-EDGTTVVVKRLKDVNVG-------KRDFEQQMEIVGSIR--HENVVELKAYYYSKDEKLMVYD 399 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~-------~~~~~~e~~~l~~l~--h~niv~l~~~~~~~~~~~lv~e 399 (625)
+.||+|+||+||+|.. .+++.||||+++..... .+.+.+|++++.+++ |+||+++++++...+..++|||
T Consensus 49 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~~~~lv~e 128 (320)
T 3a99_A 49 PLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE 128 (320)
T ss_dssp EECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEEEEEEE
T ss_pred EEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCCcEEEEEE
Confidence 5699999999999985 57899999999765322 245778999999996 5999999999999999999999
Q ss_pred eccC-CChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeC-CCCCeeEecccccccc
Q 006922 400 YYSL-GSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLN-SQQYGCVSDLGLTTIT 477 (625)
Q Consensus 400 ~~~~-g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~-~~~~~kl~DfGla~~~ 477 (625)
|+.+ ++|.+++.... .+++..+..++.|+++||+|||+.+ |+||||||+|||++ +++.+||+|||+++..
T Consensus 129 ~~~~~~~L~~~l~~~~-----~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~~~ 200 (320)
T 3a99_A 129 RPEPVQDLFDFITERG-----ALQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL 200 (320)
T ss_dssp CCSSEEEHHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred cCCCCccHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHCC---cEeCCCCHHHEEEeCCCCCEEEeeCcccccc
Confidence 9986 89999987643 4899999999999999999999998 99999999999999 7889999999999876
Q ss_pred ccc-ccccccCCCcCCccccCCCCC-CCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhccccccccccc
Q 006922 478 SAL-APVIARAAGYRAPEVTDSRKA-TQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVE 555 (625)
Q Consensus 478 ~~~-~~~~~~~~~y~aPE~~~~~~~-~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 555 (625)
... .....++..|+|||++.+..+ +.++||||||+++|||++|+.||.... .. ..... .+
T Consensus 201 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~-----~~-------~~~~~---~~--- 262 (320)
T 3a99_A 201 KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-----EI-------IRGQV---FF--- 262 (320)
T ss_dssp CSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-----HH-------HHCCC---CC---
T ss_pred ccccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh-----hh-------hcccc---cc---
Confidence 543 233468888999999876665 688999999999999999999996421 10 01100 00
Q ss_pred ccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006922 556 LLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR 592 (625)
Q Consensus 556 ~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 592 (625)
.... ..++.+++.+||+.||++|||+.|+++
T Consensus 263 ---~~~~---~~~~~~li~~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 263 ---RQRV---SSECQHLIRWCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp ---SSCC---CHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ---cccC---CHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0111 235677888999999999999999986
No 243
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=7e-37 Score=315.15 Aligned_cols=241 Identities=19% Similarity=0.287 Sum_probs=170.9
Q ss_pred hHcccCCceeEEEEEEc-CCcEEEEEEeccccCCh---HHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccCCC
Q 006922 330 EVLGKGTFGMAYKAILE-DGTTVVVKRLKDVNVGK---RDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLGS 405 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~---~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 405 (625)
+.||+|+||+||+|... +|+.||||++....... +.+.++..++..++||||+++++++...+..++||||+ ++.
T Consensus 31 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~ 109 (318)
T 2dyl_A 31 GEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELM-GTC 109 (318)
T ss_dssp EEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCC-SEE
T ss_pred ceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEEecc-CCc
Confidence 56999999999999965 78999999997653322 23344455678889999999999999999999999999 445
Q ss_pred hhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhc-CCCCceecCCCCCCEEeCCCCCeeEeccccccccccc--cc
Q 006922 406 VSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAA-NGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSAL--AP 482 (625)
Q Consensus 406 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~-~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~--~~ 482 (625)
+..+..... ..+++..+..++.|+++||+|||+. + |+||||||+||+++.++.+||+|||++...... ..
T Consensus 110 ~~~l~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~ 182 (318)
T 2dyl_A 110 AEKLKKRMQ----GPIPERILGKMTVAIVKALYYLKEKHG---VIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKD 182 (318)
T ss_dssp HHHHHHHHT----SCCCHHHHHHHHHHHHHHHHHHHHHHC---CCCCCCCGGGEEECTTSCEEECCCTTC----------
T ss_pred HHHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHHhhCC---EEeCCCCHHHEEECCCCCEEEEECCCchhccCCcccc
Confidence 554444322 2489999999999999999999995 7 999999999999999999999999999765432 22
Q ss_pred ccccCCCcCCccccC-----CCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhccccccccccccc
Q 006922 483 VIARAAGYRAPEVTD-----SRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELL 557 (625)
Q Consensus 483 ~~~~~~~y~aPE~~~-----~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 557 (625)
...++..|+|||.+. ...++.++||||||+++|||++|+.||...... .... ......... ...
T Consensus 183 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~---~~~~~~~~~------~~~ 251 (318)
T 2dyl_A 183 RSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTD--FEVL---TKVLQEEPP------LLP 251 (318)
T ss_dssp ----CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSH--HHHH---HHHHHSCCC------CCC
T ss_pred ccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCcc--HHHH---HHHhccCCC------CCC
Confidence 346788999999984 557889999999999999999999999753321 1111 111111110 000
Q ss_pred CCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006922 558 RYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR 592 (625)
Q Consensus 558 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 592 (625)
.... ...++.+++.+||..||.+||++.|+++
T Consensus 252 ~~~~---~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 252 GHMG---FSGDFQSFVKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp SSSC---CCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred ccCC---CCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 0011 1235677888999999999999999986
No 244
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=4.9e-37 Score=315.73 Aligned_cols=232 Identities=18% Similarity=0.326 Sum_probs=184.1
Q ss_pred HhHcccCCceeEEEEEE-cCCcEEEEEEeccccC-------ChHHHHHHHHHHHcC----CCCceecceeEEEecCceEE
Q 006922 329 AEVLGKGTFGMAYKAIL-EDGTTVVVKRLKDVNV-------GKRDFEQQMEIVGSI----RHENVVELKAYYYSKDEKLM 396 (625)
Q Consensus 329 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-------~~~~~~~e~~~l~~l----~h~niv~l~~~~~~~~~~~l 396 (625)
.+.||+|+||+||+|.. .+++.||||+++.... ....+.+|++++.++ +||||+++++++...+..++
T Consensus 36 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~~~~~~~ 115 (312)
T 2iwi_A 36 GPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEGFML 115 (312)
T ss_dssp EEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC-----CEE
T ss_pred eeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEecCCeEEE
Confidence 35799999999999985 4789999999975432 123466789988888 89999999999999999999
Q ss_pred EEEe-ccCCChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeC-CCCCeeEeccccc
Q 006922 397 VYDY-YSLGSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLN-SQQYGCVSDLGLT 474 (625)
Q Consensus 397 v~e~-~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~-~~~~~kl~DfGla 474 (625)
|||| +.+++|.+++.... .+++..+..++.|+++||+|||+.+ |+||||||+||+++ .++.+||+|||++
T Consensus 116 v~e~~~~~~~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~kl~dfg~~ 187 (312)
T 2iwi_A 116 VLERPLPAQDLFDYITEKG-----PLGEGPSRCFFGQVVAAIQHCHSRG---VVHRDIKDENILIDLRRGCAKLIDFGSG 187 (312)
T ss_dssp EEECCSSEEEHHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHHHT---EECCCCSGGGEEEETTTTEEEECCCSSC
T ss_pred EEEecCCCCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChhhEEEeCCCCeEEEEEcchh
Confidence 9999 78999999997643 4899999999999999999999998 99999999999999 8899999999999
Q ss_pred cccccc-ccccccCCCcCCccccCCCCCC-CccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccccc
Q 006922 475 TITSAL-APVIARAAGYRAPEVTDSRKAT-QASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVF 552 (625)
Q Consensus 475 ~~~~~~-~~~~~~~~~y~aPE~~~~~~~~-~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 552 (625)
+..... .....++..|+|||++.+..+. .++||||||+++|||++|+.||.... ... ...
T Consensus 188 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-----~~~-------~~~------ 249 (312)
T 2iwi_A 188 ALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ-----EIL-------EAE------ 249 (312)
T ss_dssp EECCSSCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-----HHH-------HTC------
T ss_pred hhcccCcccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH-----HHh-------hhc------
Confidence 876543 2334678889999998766664 58999999999999999999996421 110 000
Q ss_pred cccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006922 553 DVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR 592 (625)
Q Consensus 553 d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 592 (625)
. ........++.+++.+||+.+|++|||+.|+++
T Consensus 250 ---~---~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~ 283 (312)
T 2iwi_A 250 ---L---HFPAHVSPDCCALIRRCLAPKPSSRPSLEEILL 283 (312)
T ss_dssp ---C---CCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred ---c---CCcccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0 000112235677888999999999999999986
No 245
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=1.9e-36 Score=307.45 Aligned_cols=227 Identities=11% Similarity=0.067 Sum_probs=177.7
Q ss_pred hHcccCCceeEEEEEEc-CCcEEEEEEeccccCCh----HHHHHHHHHHHcCCCCceecceeEEEecCceEEEEEeccCC
Q 006922 330 EVLGKGTFGMAYKAILE-DGTTVVVKRLKDVNVGK----RDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLG 404 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~----~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 404 (625)
+.||+|+||+||+|... +|+.||||+++...... +.+.+|++++.+++||||+++++++...+..++||||++++
T Consensus 37 ~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g~ 116 (286)
T 3uqc_A 37 IFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVAEWIRGG 116 (286)
T ss_dssp EEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCCEE
T ss_pred EEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEEEecCCC
Confidence 56999999999999965 58999999998654332 67899999999999999999999999999999999999999
Q ss_pred ChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEeccccccccccccccc
Q 006922 405 SVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVI 484 (625)
Q Consensus 405 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~ 484 (625)
+|.+++... ....++.+++.|++.||+|||+++ |+||||||+|||++.++.+||+++|
T Consensus 117 ~L~~~l~~~-------~~~~~~~~i~~ql~~aL~~lH~~g---ivH~Dikp~NIll~~~g~~kl~~~~------------ 174 (286)
T 3uqc_A 117 SLQEVADTS-------PSPVGAIRAMQSLAAAADAAHRAG---VALSIDHPSRVRVSIDGDVVLAYPA------------ 174 (286)
T ss_dssp EHHHHHTTC-------CCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEEETTSCEEECSCC------------
T ss_pred CHHHHHhcC-------CChHHHHHHHHHHHHHHHHHHHCC---CccCCCCcccEEEcCCCCEEEEecc------------
Confidence 999998532 345578889999999999999998 9999999999999999999998543
Q ss_pred ccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccccccccccCCCCcHH
Q 006922 485 ARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIEE 564 (625)
Q Consensus 485 ~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 564 (625)
|++| ++.++|||||||++|||+||+.||......+...... ............. .+ .
T Consensus 175 -----~~~~-------~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~-------~~~~~~~~~~~~~-~~---~ 231 (286)
T 3uqc_A 175 -----TMPD-------ANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAE-------RDTAGQPIEPADI-DR---D 231 (286)
T ss_dssp -----CCTT-------CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECC-------BCTTSCBCCHHHH-CT---T
T ss_pred -----ccCC-------CCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHH-------HHhccCCCChhhc-cc---C
Confidence 4443 6889999999999999999999998654332110000 0000000000000 01 1
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCCC
Q 006922 565 EMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPNDS 602 (625)
Q Consensus 565 ~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~~ 602 (625)
...++.+++.+||+.||++| |+.|+++.|+++.....
T Consensus 232 ~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~~~ 268 (286)
T 3uqc_A 232 IPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAVAD 268 (286)
T ss_dssp SCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC---
T ss_pred CCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhccCC
Confidence 12356788889999999999 99999999999987654
No 246
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=5.6e-37 Score=327.82 Aligned_cols=235 Identities=15% Similarity=0.128 Sum_probs=175.3
Q ss_pred hHcccCCceeEEEEEE-cCCcEEEEEEeccccC----ChHHHHHHHHHHHcCCC-Cceecc---------eeE-------
Q 006922 330 EVLGKGTFGMAYKAIL-EDGTTVVVKRLKDVNV----GKRDFEQQMEIVGSIRH-ENVVEL---------KAY------- 387 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~----~~~~~~~e~~~l~~l~h-~niv~l---------~~~------- 387 (625)
++||+|+||+||+|.. .+|+.||||+++.... ..+.+.+|+.++..++| +|.... ...
T Consensus 84 ~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (413)
T 3dzo_A 84 TVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKK 163 (413)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEECCC--
T ss_pred cccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcccCCCC
Confidence 5699999999999994 5799999999984322 24678999999999977 221111 111
Q ss_pred -----EEe-----cCceEEEEEeccCCChhhhhcccc--CCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCC
Q 006922 388 -----YYS-----KDEKLMVYDYYSLGSVSAMLHSER--GEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKS 455 (625)
Q Consensus 388 -----~~~-----~~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~ 455 (625)
+.. ....+++|++ .+++|.+++.... ......++|..+..++.|+++||+|||+++ |+||||||
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---iiHrDiKp 239 (413)
T 3dzo_A 164 KMIRVRLDERDMWVLSRFFLYPR-MQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG---LVHTYLRP 239 (413)
T ss_dssp -------------CCSEEEEEEC-CSEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT---EECSCCCG
T ss_pred ccccccCCCccccccceEEEeeh-hcCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCccc
Confidence 111 1234566665 4679998885221 112335889999999999999999999998 99999999
Q ss_pred CCEEeCCCCCeeEecccccccccccccccccCCCcCCcccc----------CCCCCCCccchhhhHHHHHHHHhCCCCCC
Q 006922 456 SNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVT----------DSRKATQASDVYSFGVVLLEILTGKSPIH 525 (625)
Q Consensus 456 ~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~y~aPE~~----------~~~~~~~~~DvwS~Gvil~elltG~~p~~ 525 (625)
+|||++.++.+||+|||+++..........| ..|+|||++ ....++.++|||||||++|||+||+.||.
T Consensus 240 ~NILl~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~Pf~ 318 (413)
T 3dzo_A 240 VDIVLDQRGGVFLTGFEHLVRDGASAVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNT 318 (413)
T ss_dssp GGEEECTTCCEEECCGGGCEETTEEECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCCCC
T ss_pred ceEEEecCCeEEEEeccceeecCCccccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCCCCC
Confidence 9999999999999999999877665555567 899999998 66678899999999999999999999997
Q ss_pred CCCCcchhhHHHHHHHHhhcccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHH
Q 006922 526 TTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVV 591 (625)
Q Consensus 526 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~ 591 (625)
.....+... .+ ....+... .++.+++.+||+.||++||++.|++
T Consensus 319 ~~~~~~~~~---------------~~----~~~~~~~~---~~~~~li~~~l~~dP~~Rpt~~~~l 362 (413)
T 3dzo_A 319 DDAALGGSE---------------WI----FRSCKNIP---QPVRALLEGFLRYPKEDRLLPLQAM 362 (413)
T ss_dssp TTGGGSCSG---------------GG----GSSCCCCC---HHHHHHHHHHTCSSGGGSCCHHHHT
T ss_pred CcchhhhHH---------------HH----HhhcccCC---HHHHHHHHHHccCChhhCcCHHHHH
Confidence 643322111 11 11111122 3577788899999999999976664
No 247
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2e-36 Score=343.99 Aligned_cols=231 Identities=18% Similarity=0.255 Sum_probs=185.7
Q ss_pred hHcccCCceeEEEEEEc--CCcEEEEEEeccccC--ChHHHHHHHHHHHcCCCCceecceeEEEecCc-----eEEEEEe
Q 006922 330 EVLGKGTFGMAYKAILE--DGTTVVVKRLKDVNV--GKRDFEQQMEIVGSIRHENVVELKAYYYSKDE-----KLMVYDY 400 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~--~g~~vavK~l~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~-----~~lv~e~ 400 (625)
+.||+|+||+||+|... +|+.||||++..... ....+.+|++++.+++||||+++++++...+. .++||||
T Consensus 86 ~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~~lv~E~ 165 (681)
T 2pzi_A 86 GCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEY 165 (681)
T ss_dssp EEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEEEEEEEC
T ss_pred EEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCceeEEEEEe
Confidence 56999999999999964 689999999875432 23568899999999999999999999988765 6999999
Q ss_pred ccCCChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEeccccccccccc
Q 006922 401 YSLGSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSAL 480 (625)
Q Consensus 401 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~ 480 (625)
+++++|.+++.. .++|.++..++.|++.||+|||+++ |+||||||+|||++.+ .+||+|||+++.....
T Consensus 166 ~~g~~L~~~~~~-------~l~~~~~~~~~~qi~~aL~~lH~~g---iiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~~ 234 (681)
T 2pzi_A 166 VGGQSLKRSKGQ-------KLPVAEAIAYLLEILPALSYLHSIG---LVYNDLKPENIMLTEE-QLKLIDLGAVSRINSF 234 (681)
T ss_dssp CCCEECC----C-------CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECSS-CEEECCCTTCEETTCC
T ss_pred CCCCcHHHHHhC-------CCCHHHHHHHHHHHHHHHHHHHHCC---CeecccChHHeEEeCC-cEEEEecccchhcccC
Confidence 999999887653 3899999999999999999999998 9999999999999885 8999999999877654
Q ss_pred ccccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccccccccccCCC
Q 006922 481 APVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYP 560 (625)
Q Consensus 481 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 560 (625)
....||.+|+|||++.+. ++.++|||||||++|||++|..||......... ...
T Consensus 235 -~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~~------------------------~~~ 288 (681)
T 2pzi_A 235 -GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYVDGLP------------------------EDD 288 (681)
T ss_dssp -SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEECSSCC------------------------TTC
T ss_pred -CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCccccccccc------------------------ccc
Confidence 445789999999998754 488999999999999999999988642211100 000
Q ss_pred CcHHHHHHHHHHHHHccCCCCCCCCC-HHHHHHHHHhh
Q 006922 561 NIEEEMVEMLQIAMSCVVRMPDQRPK-MPDVVRVIENV 597 (625)
Q Consensus 561 ~~~~~~~~l~~l~~~Cl~~~P~~RPs-~~ev~~~L~~~ 597 (625)
........+.+++.+||+.||.+||+ ++++...|..+
T Consensus 289 ~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 326 (681)
T 2pzi_A 289 PVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGV 326 (681)
T ss_dssp HHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred cccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHH
Confidence 11122346778889999999999995 66666666554
No 248
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=4e-36 Score=333.30 Aligned_cols=262 Identities=20% Similarity=0.278 Sum_probs=196.4
Q ss_pred HhHcccCCceeEEEEEE-cCCcEEEEEEeccccC--ChHHHHHHHHHHHcCCCCceecceeEEEe------cCceEEEEE
Q 006922 329 AEVLGKGTFGMAYKAIL-EDGTTVVVKRLKDVNV--GKRDFEQQMEIVGSIRHENVVELKAYYYS------KDEKLMVYD 399 (625)
Q Consensus 329 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~------~~~~~lv~e 399 (625)
.+.||+|+||+||+|.. .+|+.||||+++.... ..+.+.+|++++.+++||||+++++++.. .+..++|||
T Consensus 19 ~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~~LVmE 98 (676)
T 3qa8_A 19 KERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAME 98 (676)
T ss_dssp CCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSCCCEEE
T ss_pred EEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeEEEEEE
Confidence 36799999999999995 4689999999876422 23568899999999999999999998765 567799999
Q ss_pred eccCCChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCC---eeEeccccccc
Q 006922 400 YYSLGSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQY---GCVSDLGLTTI 476 (625)
Q Consensus 400 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~---~kl~DfGla~~ 476 (625)
|+++|+|.+++..... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++. +||+|||++..
T Consensus 99 y~~ggsL~~~L~~~~~--~~~lse~~i~~I~~QLl~aL~yLHs~g---IVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~ 173 (676)
T 3qa8_A 99 YCEGGDLRKYLNQFEN--CCGLKEGPIRTLLSDISSALRYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKE 173 (676)
T ss_dssp CCSSCBHHHHHHSSSC--TTCCCSSHHHHHHHHHHHHHHHHHHTT---BCCCCCCSTTEEEECCSSSCEEEECSCCCCCB
T ss_pred eCCCCCHHHHHHhccc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHeEeecCCCceeEEEcccccccc
Confidence 9999999999986432 224888899999999999999999998 999999999999997765 89999999987
Q ss_pred cccc--ccccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhccc-------
Q 006922 477 TSAL--APVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEW------- 547 (625)
Q Consensus 477 ~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~------- 547 (625)
.... .....++..|+|||.+.+..++.++|||||||++|||++|+.||...... ..|.........
T Consensus 174 ~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~-----~~~~~~i~~~~~~~~~~~~ 248 (676)
T 3qa8_A 174 LDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQP-----VQWHGKVREKSNEHIVVYD 248 (676)
T ss_dssp TTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHH-----HHSSTTCC------CCSCC
T ss_pred cccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccch-----hhhhhhhhcccchhhhhhh
Confidence 6533 23356888999999999999999999999999999999999999653211 111100000000
Q ss_pred -cccc--ccccccC-CCCcHHHHHHHHHHHHHccCCCCCCCCCHHH-----HHHHHHhhCCC
Q 006922 548 -TAEV--FDVELLR-YPNIEEEMVEMLQIAMSCVVRMPDQRPKMPD-----VVRVIENVRPN 600 (625)
Q Consensus 548 -~~~~--~d~~~~~-~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~e-----v~~~L~~~~~~ 600 (625)
.... +...... ..........+.+++..|+..||++|||+.| ..+.++.+...
T Consensus 249 ~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL~~ 310 (676)
T 3qa8_A 249 DLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILSL 310 (676)
T ss_dssp CCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHHCC
T ss_pred hhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHHhc
Confidence 0000 0000000 0112234567788888999999999999988 55666666554
No 249
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=4.3e-35 Score=299.47 Aligned_cols=222 Identities=18% Similarity=0.298 Sum_probs=173.4
Q ss_pred hHcccCCceeEEEEEE-cCCcEEEEEEeccccCChHHHHHHHHHH-HcCCCCceecceeEEEe----cCceEEEEEeccC
Q 006922 330 EVLGKGTFGMAYKAIL-EDGTTVVVKRLKDVNVGKRDFEQQMEIV-GSIRHENVVELKAYYYS----KDEKLMVYDYYSL 403 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~e~~~l-~~l~h~niv~l~~~~~~----~~~~~lv~e~~~~ 403 (625)
++||+|+||.||++.. .+++.||+|+++. ...+.+|++++ ...+||||+++++++.. ....++||||+++
T Consensus 24 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~ 99 (299)
T 3m2w_A 24 QVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDG 99 (299)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEC----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEECCCCS
T ss_pred cccccCCCeEEEEEEEcCCCcEEEEEEecc----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEeecCC
Confidence 4699999999999996 4789999999975 35678888887 55689999999999987 6678999999999
Q ss_pred CChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCC---CCCeeEeccccccccccc
Q 006922 404 GSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNS---QQYGCVSDLGLTTITSAL 480 (625)
Q Consensus 404 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~---~~~~kl~DfGla~~~~~~ 480 (625)
|+|.+++..... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++. ++.+||+|||++....
T Consensus 100 ~~L~~~l~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~-- 171 (299)
T 3m2w_A 100 GELFSRIQDRGD---QAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT-- 171 (299)
T ss_dssp CBHHHHHHHCTT---CCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSTTCCEEECCCTTCEECT--
T ss_pred CcHHHHHHhccC---CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEecCCCCCcEEEeccccccccc--
Confidence 999999986432 24899999999999999999999998 999999999999998 7889999999887543
Q ss_pred ccccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccccccccccCCC
Q 006922 481 APVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYP 560 (625)
Q Consensus 481 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 560 (625)
+..++.++|||||||++|||+||+.||......+... .....+.. .....+
T Consensus 172 -----------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~-----------~~~~~~~~-~~~~~~ 222 (299)
T 3m2w_A 172 -----------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP-----------GMKTRIRM-GQYEFP 222 (299)
T ss_dssp -----------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------C-----------CSCCSSCT-TCCSSC
T ss_pred -----------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhH-----------HHHHHHhh-ccccCC
Confidence 2346789999999999999999999997543321110 00000000 000001
Q ss_pred Cc--HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006922 561 NI--EEEMVEMLQIAMSCVVRMPDQRPKMPDVVR 592 (625)
Q Consensus 561 ~~--~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 592 (625)
.. .....++.+++.+||+.||.+|||+.|+++
T Consensus 223 ~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 256 (299)
T 3m2w_A 223 NPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN 256 (299)
T ss_dssp HHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred chhcccCCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 00 112346778888999999999999999987
No 250
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=1.3e-34 Score=301.05 Aligned_cols=236 Identities=14% Similarity=0.142 Sum_probs=176.5
Q ss_pred HHhHcccCCceeEEEEEEcCCcEEEEEEeccccC---------ChHHHHHHHHHHHcCC---------CCceecceeEE-
Q 006922 328 SAEVLGKGTFGMAYKAILEDGTTVVVKRLKDVNV---------GKRDFEQQMEIVGSIR---------HENVVELKAYY- 388 (625)
Q Consensus 328 ~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~---------~~~~~~~e~~~l~~l~---------h~niv~l~~~~- 388 (625)
..+.||+|+||+||+|+. +|+.||||+++.... ..+.+.+|++++++++ |||||++.+.+
T Consensus 24 ~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~~~~~ 102 (336)
T 2vuw_A 24 RCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNSVHC 102 (336)
T ss_dssp TCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEEEEEE
T ss_pred heeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhcceeE
Confidence 457899999999999987 689999999976432 1267889999988885 66666665553
Q ss_pred ----------------Ee-------------cCceEEEEEeccCCChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHH
Q 006922 389 ----------------YS-------------KDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIAR 439 (625)
Q Consensus 389 ----------------~~-------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~ 439 (625)
.. .+..++||||+++|++.+.+... .+++..+..++.|++.||+|
T Consensus 103 ~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~~------~~~~~~~~~i~~qi~~aL~~ 176 (336)
T 2vuw_A 103 VQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRTK------LSSLATAKSILHQLTASLAV 176 (336)
T ss_dssp EESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTTT------CCCHHHHHHHHHHHHHHHHH
T ss_pred ecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHhc------CCCHHHHHHHHHHHHHHHHH
Confidence 32 67899999999999777666431 38999999999999999999
Q ss_pred HH-hcCCCCceecCCCCCCEEeCCCC--------------------CeeEecccccccccccccccccCCCcCCccccCC
Q 006922 440 IH-AANGGKLVHGNIKSSNIFLNSQQ--------------------YGCVSDLGLTTITSALAPVIARAAGYRAPEVTDS 498 (625)
Q Consensus 440 LH-~~~~~~ivHrDlk~~NIll~~~~--------------------~~kl~DfGla~~~~~~~~~~~~~~~y~aPE~~~~ 498 (625)
|| +.+ |+||||||+|||++.++ .+||+|||+|+..... ...||..|+|||++.+
T Consensus 177 lH~~~~---ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~--~~~gt~~y~aPE~~~g 251 (336)
T 2vuw_A 177 AEASLR---FEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG--IVVFCDVSMDEDLFTG 251 (336)
T ss_dssp HHHHHC---CBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT--EEECCCCTTCSGGGCC
T ss_pred HHHhCC---EeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC--cEEEeecccChhhhcC
Confidence 99 888 99999999999999887 8999999999977543 3478999999999987
Q ss_pred CCCCCccchhhhHHH-HHHHHhCCCCCCCCCCcchhhHHHHHHHHhhcccccccccccccCCCCcHHHHHHHHHHHHHcc
Q 006922 499 RKATQASDVYSFGVV-LLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIEEEMVEMLQIAMSCV 577 (625)
Q Consensus 499 ~~~~~~~DvwS~Gvi-l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl 577 (625)
.. +.++||||+|++ .+++++|..||..... .....+ ......... .....+.......++.+++.+|+
T Consensus 252 ~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~--~~~~~~---~~~~~~~~~-----~~~~~~~~~~~s~~~~dli~~~L 320 (336)
T 2vuw_A 252 DG-DYQFDIYRLMKKENNNRWGEYHPYSNVLW--LHYLTD---KMLKQMTFK-----TKCNTPAMKQIKRKIQEFHRTML 320 (336)
T ss_dssp CS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHH--HHHHHH---HHHHTCCCS-----SCCCSHHHHHHHHHHHHHHHHGG
T ss_pred CC-ccceehhhhhCCCCcccccccCCCcchhh--hhHHHH---hhhhhhccC-----cccchhhhhhcCHHHHHHHHHHh
Confidence 66 889999998777 7778889999842100 000111 111000000 00001112345667889999999
Q ss_pred CCCCCCCCCHHHHH
Q 006922 578 VRMPDQRPKMPDVV 591 (625)
Q Consensus 578 ~~~P~~RPs~~ev~ 591 (625)
+.| |+.|++
T Consensus 321 ~~d-----sa~e~l 329 (336)
T 2vuw_A 321 NFS-----SATDLL 329 (336)
T ss_dssp GSS-----SHHHHH
T ss_pred ccC-----CHHHHH
Confidence 976 888887
No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.95 E-value=1.8e-29 Score=279.35 Aligned_cols=180 Identities=13% Similarity=0.049 Sum_probs=128.5
Q ss_pred cccCCceeEEEEE-EcCCcEEEEEEecccc-----------CChHHHHHHHHHHHcC-CCCceecceeEEEecCceEEEE
Q 006922 332 LGKGTFGMAYKAI-LEDGTTVVVKRLKDVN-----------VGKRDFEQQMEIVGSI-RHENVVELKAYYYSKDEKLMVY 398 (625)
Q Consensus 332 lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~-----------~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 398 (625)
.+.|++|.++.++ .--|+.+|+|++.... ...++|.+|+++|+++ .|+||+++++++++++..||||
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM 321 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM 321 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence 5667777776655 3358999999997541 1125689999999999 6999999999999999999999
Q ss_pred EeccCCChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEeccccccccc
Q 006922 399 DYYSLGSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITS 478 (625)
Q Consensus 399 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~ 478 (625)
||++|++|.+++.... +++.. +|+.||+.||+|+|+++ ||||||||+|||++.++.+||+|||+|+...
T Consensus 322 Eyv~G~~L~d~i~~~~-----~l~~~---~I~~QIl~AL~ylH~~G---IIHRDIKPeNILL~~dg~vKL~DFGlAr~~~ 390 (569)
T 4azs_A 322 EKLPGRLLSDMLAAGE-----EIDRE---KILGSLLRSLAALEKQG---FWHDDVRPWNVMVDARQHARLIDFGSIVTTP 390 (569)
T ss_dssp ECCCSEEHHHHHHTTC-----CCCHH---HHHHHHHHHHHHHHHTT---CEESCCCGGGEEECTTSCEEECCCTTEESCC
T ss_pred ecCCCCcHHHHHHhCC-----CCCHH---HHHHHHHHHHHHHHHCC---ceeccCchHhEEECCCCCEEEeecccCeeCC
Confidence 9999999999997643 35543 58899999999999998 9999999999999999999999999998765
Q ss_pred cc---ccccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCC
Q 006922 479 AL---APVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSP 523 (625)
Q Consensus 479 ~~---~~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p 523 (625)
.. .....||++|||||++.+ .+..++|+||+|++++++.++..+
T Consensus 391 ~~~~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 391 QDCSWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp ---CCSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred CCCccccCceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence 33 234578999999999876 467789999999998887666544
No 252
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.93 E-value=2.6e-26 Score=235.88 Aligned_cols=193 Identities=31% Similarity=0.568 Sum_probs=169.3
Q ss_pred CCChhHHHHHHHHHHhCCCCCC-CCCCCCCCCCCC--CCceEeCCCC--CeEEEEEcCCCCccc--ccCcccccCCCCcc
Q 006922 22 AEPVEDKEALLDFVNNLPHSRS-LNWNESTSVCNH--WTGVKCSEDG--KRVVAVRLPGVGFSG--LIPPNTISRLSALK 94 (625)
Q Consensus 22 ~~~~~~~~~ll~~~~~~~~~~~-~~w~~~~~~c~~--w~gv~C~~~~--~~v~~l~l~~~~l~g--~~~~~~~~~l~~L~ 94 (625)
.|.+.|++||++||+++.+... .+|+.+.++| . |.||+|+... .+|+.|+|+++++.| .+|+ .|+++++|+
T Consensus 2 ~c~~~~~~aL~~~k~~~~~~~~l~~W~~~~~~C-~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~-~l~~l~~L~ 79 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLGNPTTLSSWLPTTDCC-NRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPS-SLANLPYLN 79 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTCCGGGTTCCTTSCTT-TTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCG-GGGGCTTCS
T ss_pred CCCHHHHHHHHHHHHhcCCcccccCCCCCCCCC-cCCCcceEeCCCCCCceEEEEECCCCCccCCcccCh-hHhCCCCCC
Confidence 5888999999999999854433 3898766666 6 9999998754 689999999999999 8887 499999999
Q ss_pred EEEecC-CCCCccCCcccccccccccccccccccCCCCC-CcccccccceecCCCccCCCCCCCCccccccccceecccc
Q 006922 95 ILSLRS-NVITGYFPSDFINLKSLCYLYLQFNNFSGTLP-DFSVWKNLTIINLSDNGFNGTIPRSLSNLTQLEALYLANN 172 (625)
Q Consensus 95 ~L~l~~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~ls~N~l~~~~p~~l~~l~~L~~L~l~~N 172 (625)
+|+|++ |.+.+.+|..|.++++|++|+|++|++++.+| .+..+++|++|+|++|++++.+|..+..+++|++|+|++|
T Consensus 80 ~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 159 (313)
T 1ogq_A 80 FLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGN 159 (313)
T ss_dssp EEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSS
T ss_pred eeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCC
Confidence 999995 99999999999999999999999999998888 6999999999999999999999999999999999999999
Q ss_pred cccccCCCC--CCC-CCcEEEcccCCCccccccccccCC--CCcccCCC
Q 006922 173 SLSGKIPDL--NLP-NLQQLNLANNNLSGSIPQSLKRFP--SSAFVGNS 216 (625)
Q Consensus 173 ~l~~~~p~~--~l~-~L~~L~l~~N~l~g~~p~~l~~~~--~~~~~~n~ 216 (625)
++++.+|.. .++ +|+.|+|++|+++|.+|..+..+. .+.+.+|.
T Consensus 160 ~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~L~~L~Ls~N~ 208 (313)
T 1ogq_A 160 RISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNM 208 (313)
T ss_dssp CCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCSEEECCSSE
T ss_pred cccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCcccEEECcCCc
Confidence 999988863 676 899999999999999998887754 33444444
No 253
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.93 E-value=1.5e-26 Score=254.45 Aligned_cols=178 Identities=12% Similarity=0.187 Sum_probs=146.8
Q ss_pred HhHcccCCceeEEEEEEcCCcEEEEEEeccccCC---------hHHHHHHHHHHHcCCCCceecceeEEEecCceEEEEE
Q 006922 329 AEVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVG---------KRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYD 399 (625)
Q Consensus 329 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~---------~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 399 (625)
.+.||+|+||+||+|.. .++.+++|+....... .+.+.+|++++.+++||||+++..++...+..++|||
T Consensus 341 ~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVmE 419 (540)
T 3en9_A 341 EHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMMS 419 (540)
T ss_dssp -------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEEE
T ss_pred CCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEEE
Confidence 46899999999999954 5788999987543221 2347899999999999999988888888888899999
Q ss_pred eccCCChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEecccccccccc
Q 006922 400 YYSLGSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSA 479 (625)
Q Consensus 400 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~ 479 (625)
|+++++|.+++.. +..++.|+++||+|||+++ |+||||||+|||++. .+||+|||+++....
T Consensus 420 ~~~ggsL~~~l~~-------------~~~i~~qi~~aL~~LH~~g---IiHrDiKp~NILl~~--~~kL~DFGla~~~~~ 481 (540)
T 3en9_A 420 YINGKLAKDVIED-------------NLDIAYKIGEIVGKLHKND---VIHNDLTTSNFIFDK--DLYIIDFGLGKISNL 481 (540)
T ss_dssp CCCSEEHHHHSTT-------------CTHHHHHHHHHHHHHHHTT---EECTTCCTTSEEESS--SEEECCCTTCEECCC
T ss_pred CCCCCCHHHHHHH-------------HHHHHHHHHHHHHHHHHCc---CccCCCCHHHEEECC--eEEEEECccCEECCC
Confidence 9999999999874 4579999999999999998 999999999999998 999999999998754
Q ss_pred cc----------cccccCCCcCCccccCC--CCCCCccchhhhHHHHHHHHhCCCCCC
Q 006922 480 LA----------PVIARAAGYRAPEVTDS--RKATQASDVYSFGVVLLEILTGKSPIH 525 (625)
Q Consensus 480 ~~----------~~~~~~~~y~aPE~~~~--~~~~~~~DvwS~Gvil~elltG~~p~~ 525 (625)
.. ....||..|||||++.. ..|+.++|+|+..+-..+-+.++.+|.
T Consensus 482 ~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 482 DEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp HHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred ccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 21 24578999999999976 668889999999999999888887773
No 254
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.89 E-value=6.4e-24 Score=244.54 Aligned_cols=181 Identities=20% Similarity=0.322 Sum_probs=134.6
Q ss_pred hcCCCChhHHHHHHHHHHhCCCC-CCCCCCCCCCCCCCCCceEeCCCCCeEEEEEcCCCCcccc---cCc----------
Q 006922 19 KVNAEPVEDKEALLDFVNNLPHS-RSLNWNESTSVCNHWTGVKCSEDGKRVVAVRLPGVGFSGL---IPP---------- 84 (625)
Q Consensus 19 ~~~~~~~~~~~~ll~~~~~~~~~-~~~~w~~~~~~c~~w~gv~C~~~~~~v~~l~l~~~~l~g~---~~~---------- 84 (625)
++.++.+.|++||++||+++.+. ...+|..+.++| .|.||+|+ .++|+.|+|+++++.|. +|+
T Consensus 5 ~~~~~~~~~~~all~~k~~~~~~~~l~~W~~~~~~C-~w~gv~C~--~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~~ 81 (768)
T 3rgz_A 5 SPSQSLYREIHQLISFKDVLPDKNLLPDWSSNKNPC-TFDGVTCR--DDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLES 81 (768)
T ss_dssp ---CCHHHHHHHHHHHHTTCSCTTSSTTCCTTSCGG-GSTTEEEE--TTEEEEEECTTSCCCEEHHHHHHHTTTCTTCCE
T ss_pred ccccCCHHHHHHHHHHHhhCCCcccccCCCCCCCCc-CCcceEEC--CCcEEEEECCCCCcCCccCccChhHhccCcccc
Confidence 34455678999999999998533 333898665555 89999998 47999999999999987 553
Q ss_pred ------------ccccCCCCccEEEecCCCCCccCCc--ccccccccccccccccccCCCCCC--cccccccceecCCCc
Q 006922 85 ------------NTISRLSALKILSLRSNVITGYFPS--DFINLKSLCYLYLQFNNFSGTLPD--FSVWKNLTIINLSDN 148 (625)
Q Consensus 85 ------------~~~~~l~~L~~L~l~~N~l~~~~p~--~~~~l~~L~~L~L~~N~l~~~~p~--~~~l~~L~~L~ls~N 148 (625)
..|+.+++|++|+|++|.++|.+|. .++++++|++|+|++|.+++.+|. +..+++|++|+|++|
T Consensus 82 l~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n 161 (768)
T 3rgz_A 82 LFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSAN 161 (768)
T ss_dssp EECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSS
T ss_pred cCCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCC
Confidence 3588899999999999999998888 899999999999999999888773 367888888888888
Q ss_pred cCCCCCCCC---ccccccccceecccccccccCCCCCCCCCcEEEcccCCCcccccc
Q 006922 149 GFNGTIPRS---LSNLTQLEALYLANNSLSGKIPDLNLPNLQQLNLANNNLSGSIPQ 202 (625)
Q Consensus 149 ~l~~~~p~~---l~~l~~L~~L~l~~N~l~~~~p~~~l~~L~~L~l~~N~l~g~~p~ 202 (625)
++++..|.. +.++++|++|++++|.+++.+|...+++|++|+|++|++++.+|.
T Consensus 162 ~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~ 218 (768)
T 3rgz_A 162 SISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPF 218 (768)
T ss_dssp CCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBCTTCTTCCEEECCSSCCCSCCCB
T ss_pred ccCCcCChhhhhhccCCCCCEEECCCCcccccCCcccCCcCCEEECcCCcCCCCCcc
Confidence 888766655 555556666666666555554444455555555555555544443
No 255
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.88 E-value=1.2e-23 Score=237.01 Aligned_cols=185 Identities=28% Similarity=0.434 Sum_probs=154.1
Q ss_pred CCChhHHHHHHHHHHhCCCCC----------CCCCCCCCCCCCCC---CceEeCCCCCeEEEEEcCCCCcccccCccccc
Q 006922 22 AEPVEDKEALLDFVNNLPHSR----------SLNWNESTSVCNHW---TGVKCSEDGKRVVAVRLPGVGFSGLIPPNTIS 88 (625)
Q Consensus 22 ~~~~~~~~~ll~~~~~~~~~~----------~~~w~~~~~~c~~w---~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~ 88 (625)
+....|+.||.+++.++.... ..+|+.+.++| .| .||+|+.. ++|+.|+|+++++.|.+|++ |+
T Consensus 26 ~~~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~~~~c-~w~~~~GV~C~~~-~~V~~L~L~~~~l~g~lp~~-l~ 102 (636)
T 4eco_A 26 AEYIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFNKELD-MWGAQPGVSLNSN-GRVTGLSLEGFGASGRVPDA-IG 102 (636)
T ss_dssp CHHHHHHHHHHHHHHHTTGGGCCCCC------CCCCCSSCGG-GTTCCTTEEECTT-CCEEEEECTTSCCEEEECGG-GG
T ss_pred hhHHHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCCCCcc-cccCCCCeEEcCC-CCEEEEEecCcccCCcCChH-Hh
Confidence 344569999999999874321 12698776666 89 99999876 69999999999999999975 99
Q ss_pred CCCCccEEEecCCC------------------------------------------------------------------
Q 006922 89 RLSALKILSLRSNV------------------------------------------------------------------ 102 (625)
Q Consensus 89 ~l~~L~~L~l~~N~------------------------------------------------------------------ 102 (625)
+|++|++|+|++|.
T Consensus 103 ~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~ 182 (636)
T 4eco_A 103 QLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRIT 182 (636)
T ss_dssp GCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCC
T ss_pred cCccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccc
Confidence 99999999999984
Q ss_pred ------------CCccCCcccccccccccccccccccCCC-----------------CC-Ccc--cccccceecCCCccC
Q 006922 103 ------------ITGYFPSDFINLKSLCYLYLQFNNFSGT-----------------LP-DFS--VWKNLTIINLSDNGF 150 (625)
Q Consensus 103 ------------l~~~~p~~~~~l~~L~~L~L~~N~l~~~-----------------~p-~~~--~l~~L~~L~ls~N~l 150 (625)
++| +|..|+++++|++|+|++|+++|. +| .++ .+++|++|+|++|++
T Consensus 183 l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l 261 (636)
T 4eco_A 183 LKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPN 261 (636)
T ss_dssp CCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTT
T ss_pred hhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcC
Confidence 345 788899999999999999999983 55 677 899999999999999
Q ss_pred CCCCCCCccccccccceeccccc-ccc-cCCCC--CC------CCCcEEEcccCCCcccccc--ccccCCCCc
Q 006922 151 NGTIPRSLSNLTQLEALYLANNS-LSG-KIPDL--NL------PNLQQLNLANNNLSGSIPQ--SLKRFPSSA 211 (625)
Q Consensus 151 ~~~~p~~l~~l~~L~~L~l~~N~-l~~-~~p~~--~l------~~L~~L~l~~N~l~g~~p~--~l~~~~~~~ 211 (625)
.+.+|..++++++|++|+|++|+ ++| .+|.. .+ ++|+.|+|++|+++ .+|. .++.++.+.
T Consensus 262 ~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~ 333 (636)
T 4eco_A 262 LTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLG 333 (636)
T ss_dssp CSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCC
T ss_pred CccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCC
Confidence 99999999999999999999998 888 67752 33 88899999999998 7887 777766543
No 256
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.88 E-value=1.2e-23 Score=241.96 Aligned_cols=193 Identities=26% Similarity=0.403 Sum_probs=161.0
Q ss_pred cCCCChhHHHHHHHHHHhCCCCCCCCCCCCC-----CC-CCCC------------CceEeCCCCCeEEEEEcCCCCcccc
Q 006922 20 VNAEPVEDKEALLDFVNNLPHSRSLNWNEST-----SV-CNHW------------TGVKCSEDGKRVVAVRLPGVGFSGL 81 (625)
Q Consensus 20 ~~~~~~~~~~~ll~~~~~~~~~~~~~w~~~~-----~~-c~~w------------~gv~C~~~~~~v~~l~l~~~~l~g~ 81 (625)
.+++...|+.||++||+++... +|+.+. ++ ||.| .||+|+.. ++|+.|+|+++++.|.
T Consensus 263 ~~~~~~~d~~ALl~~k~~l~~~---~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~~-~~V~~L~Ls~~~L~G~ 338 (876)
T 4ecn_A 263 ETAEYIKDYKALKAIWEALDGK---NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDNN-GRVTGLSLAGFGAKGR 338 (876)
T ss_dssp CCCHHHHHHHHHHHHHHHTTGG---GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECTT-SCEEEEECTTTCCEEE
T ss_pred ccccchHHHHHHHHHHHHcCCC---CCCcCCCcccccCCccccccccccccccCcCceEecCC-CCEEEEECccCCCCCc
Confidence 3445567999999999998644 786554 44 2589 99999874 6899999999999999
Q ss_pred cCcccccCCCCccEEEe-cCCCCCcc------------------------------------------------------
Q 006922 82 IPPNTISRLSALKILSL-RSNVITGY------------------------------------------------------ 106 (625)
Q Consensus 82 ~~~~~~~~l~~L~~L~l-~~N~l~~~------------------------------------------------------ 106 (625)
+|+. |++|++|+.|+| ++|.++|.
T Consensus 339 ip~~-l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i 417 (876)
T 4ecn_A 339 VPDA-IGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPI 417 (876)
T ss_dssp ECGG-GGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCC
T ss_pred CchH-HhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCcccccc
Confidence 9975 999999999999 77765444
Q ss_pred ----------------------CCcccccccccccccccccccCC-----------------CCC-Ccc--cccccceec
Q 006922 107 ----------------------FPSDFINLKSLCYLYLQFNNFSG-----------------TLP-DFS--VWKNLTIIN 144 (625)
Q Consensus 107 ----------------------~p~~~~~l~~L~~L~L~~N~l~~-----------------~~p-~~~--~l~~L~~L~ 144 (625)
+|..|+++++|++|+|++|+|+| .+| .++ .+++|++|+
T Consensus 418 ~~~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~ 497 (876)
T 4ecn_A 418 KKDSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVE 497 (876)
T ss_dssp CCCCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEE
T ss_pred ccccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEE
Confidence 78889999999999999999998 255 666 999999999
Q ss_pred CCCccCCCCCCCCccccccccceeccccc-ccc-cCCCC---------CCCCCcEEEcccCCCcccccc--ccccCCCC-
Q 006922 145 LSDNGFNGTIPRSLSNLTQLEALYLANNS-LSG-KIPDL---------NLPNLQQLNLANNNLSGSIPQ--SLKRFPSS- 210 (625)
Q Consensus 145 ls~N~l~~~~p~~l~~l~~L~~L~l~~N~-l~~-~~p~~---------~l~~L~~L~l~~N~l~g~~p~--~l~~~~~~- 210 (625)
|++|++.+.+|..|+++++|+.|+|++|+ ++| .+|.. .+++|+.|+|++|+|+ .+|. .+..++.+
T Consensus 498 Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~ 576 (876)
T 4ecn_A 498 LYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLG 576 (876)
T ss_dssp EESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCC
T ss_pred CcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCC
Confidence 99999999999999999999999999998 988 66641 4569999999999999 8998 77777664
Q ss_pred --cccCCCCC
Q 006922 211 --AFVGNSIS 218 (625)
Q Consensus 211 --~~~~n~~~ 218 (625)
.+.+|.+.
T Consensus 577 ~L~Ls~N~l~ 586 (876)
T 4ecn_A 577 LLDCVHNKVR 586 (876)
T ss_dssp EEECTTSCCC
T ss_pred EEECCCCCcc
Confidence 44555544
No 257
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.87 E-value=1.4e-22 Score=204.47 Aligned_cols=138 Identities=12% Similarity=0.171 Sum_probs=114.0
Q ss_pred hHcccCCceeEEEEEEcCCcEEEEEEeccccC-------------------ChHHHHHHHHHHHcCCCCceecceeEEEe
Q 006922 330 EVLGKGTFGMAYKAILEDGTTVVVKRLKDVNV-------------------GKRDFEQQMEIVGSIRHENVVELKAYYYS 390 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~-------------------~~~~~~~e~~~l~~l~h~niv~l~~~~~~ 390 (625)
+.||+|+||.||+|...+|+.||+|+++.... ....+.+|++++.+++ | +++.+++..
T Consensus 96 ~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~~~~~~ 172 (282)
T 1zar_A 96 KLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVPKVYAW 172 (282)
T ss_dssp EEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSCCEEEE
T ss_pred CEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcCeEEec
Confidence 67999999999999997799999999974321 1345889999999999 5 777776544
Q ss_pred cCceEEEEEeccCCChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEec
Q 006922 391 KDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSD 470 (625)
Q Consensus 391 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~D 470 (625)
+..++||||+++|+|.+ +.. .....++.|+++||+|||+.+ |+||||||+|||++ ++.+||+|
T Consensus 173 -~~~~lvmE~~~g~~L~~-l~~-----------~~~~~i~~qi~~~l~~lH~~g---iiHrDlkp~NILl~-~~~vkl~D 235 (282)
T 1zar_A 173 -EGNAVLMELIDAKELYR-VRV-----------ENPDEVLDMILEEVAKFYHRG---IVHGDLSQYNVLVS-EEGIWIID 235 (282)
T ss_dssp -ETTEEEEECCCCEEGGG-CCC-----------SCHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEEE-TTEEEECC
T ss_pred -cceEEEEEecCCCcHHH-cch-----------hhHHHHHHHHHHHHHHHHHCC---CEeCCCCHHHEEEE-CCcEEEEE
Confidence 56699999999999988 421 124579999999999999998 99999999999999 99999999
Q ss_pred ccccccccccccccccCCCcCCccccC
Q 006922 471 LGLTTITSALAPVIARAAGYRAPEVTD 497 (625)
Q Consensus 471 fGla~~~~~~~~~~~~~~~y~aPE~~~ 497 (625)
||+|+... .|+|||++.
T Consensus 236 FG~a~~~~----------~~~a~e~l~ 252 (282)
T 1zar_A 236 FPQSVEVG----------EEGWREILE 252 (282)
T ss_dssp CTTCEETT----------STTHHHHHH
T ss_pred CCCCeECC----------CCCHHHHHH
Confidence 99997543 378899874
No 258
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.82 E-value=7.9e-21 Score=218.72 Aligned_cols=162 Identities=32% Similarity=0.561 Sum_probs=130.1
Q ss_pred eEEEEEcCCCCcccccCcccccCCCCccEEEecCCCCCccCCccc-----------------------------------
Q 006922 67 RVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPSDF----------------------------------- 111 (625)
Q Consensus 67 ~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~----------------------------------- 111 (625)
.+..|+|++|.++|.+|.. ++.+++|+.|+|++|.++|.+|..+
T Consensus 515 ~L~~L~L~~N~l~~~~p~~-l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (768)
T 3rgz_A 515 NLAILKLSNNSFSGNIPAE-LGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNL 593 (768)
T ss_dssp TCCEEECCSSCCEEECCGG-GGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEE
T ss_pred CCCEEECCCCcccCcCCHH-HcCCCCCCEEECCCCccCCcCChHHhcccchhhhhccccccccccccccccccccccccc
Confidence 3556677777777766653 7777777777777777766665433
Q ss_pred -----------------------------------ccccccccccccccccCCCCC-CcccccccceecCCCccCCCCCC
Q 006922 112 -----------------------------------INLKSLCYLYLQFNNFSGTLP-DFSVWKNLTIINLSDNGFNGTIP 155 (625)
Q Consensus 112 -----------------------------------~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~ls~N~l~~~~p 155 (625)
.++++|+.|||++|+++|.+| .++.+++|+.|+|++|+++|.+|
T Consensus 594 ~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip 673 (768)
T 3rgz_A 594 LEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIP 673 (768)
T ss_dssp EECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCC
T ss_pred cccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCC
Confidence 234567788888888888887 68888899999999999999999
Q ss_pred CCccccccccceecccccccccCCCC--CCCCCcEEEcccCCCccccccc--cccCCCCcccCCCCCCCCCCCCCCCC
Q 006922 156 RSLSNLTQLEALYLANNSLSGKIPDL--NLPNLQQLNLANNNLSGSIPQS--LKRFPSSAFVGNSISFDENLAPRASP 229 (625)
Q Consensus 156 ~~l~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~L~l~~N~l~g~~p~~--l~~~~~~~~~~n~~~~~~~~~~~~~~ 229 (625)
..++++++|+.|||++|+++|.+|.. .+++|+.|+|++|+|+|.||.. +..++...|.||+.+||.++.+|...
T Consensus 674 ~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l~~C~~~ 751 (768)
T 3rgz_A 674 DEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLPRCDPS 751 (768)
T ss_dssp GGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTTSCCCCSC
T ss_pred hHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCchhhccCCHHHhcCCchhcCCCCcCCCCC
Confidence 99999999999999999999999874 7889999999999999999964 66778889999999999998888654
No 259
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.82 E-value=4.9e-21 Score=197.73 Aligned_cols=190 Identities=21% Similarity=0.329 Sum_probs=153.3
Q ss_pred CCCChhHHHHHHHHHHhCC-CC-C-CCCCC----CCCCCCCCCCceEeCC--------CCCeEEEEEcCCCCcccccCcc
Q 006922 21 NAEPVEDKEALLDFVNNLP-HS-R-SLNWN----ESTSVCNHWTGVKCSE--------DGKRVVAVRLPGVGFSGLIPPN 85 (625)
Q Consensus 21 ~~~~~~~~~~ll~~~~~~~-~~-~-~~~w~----~~~~~c~~w~gv~C~~--------~~~~v~~l~l~~~~l~g~~~~~ 85 (625)
.++..+|++||++||..+. +. . ..+|+ ...++| .|.|+.|+. ...+|+.|+|+++++. .+|+.
T Consensus 22 ~~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~-~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~ 99 (328)
T 4fcg_A 22 STALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIE-TRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQ 99 (328)
T ss_dssp -CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSC-CSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSC
T ss_pred cccCchHHHHHHHHHHhccCCchhhhhhhccccccccccc-ccCCcchhhhHHHHhcccccceeEEEccCCCch-hcChh
Confidence 3455678999999999762 22 2 22784 344555 799999952 2357999999999998 77775
Q ss_pred cccCCCCccEEEecCCCCCccCCcccccccccccccccccccCCCCC-CcccccccceecCCCccCCCCCCCCccc----
Q 006922 86 TISRLSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSGTLP-DFSVWKNLTIINLSDNGFNGTIPRSLSN---- 160 (625)
Q Consensus 86 ~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~ls~N~l~~~~p~~l~~---- 160 (625)
++++++|++|+|++|.|+ .+|..|+++++|++|+|++|+++ .+| .+..+++|++|+|++|++.+.+|..+..
T Consensus 100 -l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~ 176 (328)
T 4fcg_A 100 -AFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDAS 176 (328)
T ss_dssp -GGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-C
T ss_pred -hhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccch
Confidence 888999999999999999 68999999999999999999999 555 7999999999999999998899988765
Q ss_pred -----cccccceecccccccccCCC-C-CCCCCcEEEcccCCCccccccccccCCCC---cccCCCC
Q 006922 161 -----LTQLEALYLANNSLSGKIPD-L-NLPNLQQLNLANNNLSGSIPQSLKRFPSS---AFVGNSI 217 (625)
Q Consensus 161 -----l~~L~~L~l~~N~l~~~~p~-~-~l~~L~~L~l~~N~l~g~~p~~l~~~~~~---~~~~n~~ 217 (625)
+++|++|+|++|+++ .+|. . .+++|+.|+|++|++++ +|..+..++++ .+.+|..
T Consensus 177 ~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~Ls~n~~ 241 (328)
T 4fcg_A 177 GEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDLRGCTA 241 (328)
T ss_dssp CCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEEECTTCTT
T ss_pred hhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEEECcCCcc
Confidence 899999999999998 5664 3 78899999999999984 66667766654 4445554
No 260
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.80 E-value=1.3e-19 Score=179.68 Aligned_cols=153 Identities=24% Similarity=0.288 Sum_probs=130.5
Q ss_pred eEEEEEcCCCCcccccCcccccCCCCccEEEecCCCCCccCCcccccccccccccccccccCCCCC-CcccccccceecC
Q 006922 67 RVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSGTLP-DFSVWKNLTIINL 145 (625)
Q Consensus 67 ~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l 145 (625)
.++.|+|++|++.+..+ ..|.++++|++|+|++|.|++..|..|.++++|++|+|++|++++..+ .|..+++|++|+|
T Consensus 36 ~l~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 114 (251)
T 3m19_A 36 DTEKLDLQSTGLATLSD-ATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYL 114 (251)
T ss_dssp TCCEEECTTSCCCCCCT-TTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCEEEccCCCcCccCH-hHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEc
Confidence 47789999999987554 469999999999999999999888889999999999999999997766 5788999999999
Q ss_pred CCccCCCCCCCCccccccccceecccccccccCCC-C-CCCCCcEEEcccCCCccccccccccCCC---CcccCCCCCCC
Q 006922 146 SDNGFNGTIPRSLSNLTQLEALYLANNSLSGKIPD-L-NLPNLQQLNLANNNLSGSIPQSLKRFPS---SAFVGNSISFD 220 (625)
Q Consensus 146 s~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~-~-~l~~L~~L~l~~N~l~g~~p~~l~~~~~---~~~~~n~~~~~ 220 (625)
++|+|++..+..|..+++|++|+|++|+|++..+. . .+++|+.|+|++|+|++..|..+..++. +.+.+|++.|.
T Consensus 115 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 115 GGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred CCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 99999977666789999999999999999987774 3 7899999999999999777766665554 56778888776
No 261
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.80 E-value=1.4e-19 Score=175.63 Aligned_cols=154 Identities=21% Similarity=0.267 Sum_probs=104.8
Q ss_pred CCCCCCCCCCCceEeCCCC---------CeEEEEEcCCCCcccccCcccccCCCCccEEEecCCCCCccCCccccccccc
Q 006922 47 NESTSVCNHWTGVKCSEDG---------KRVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPSDFINLKSL 117 (625)
Q Consensus 47 ~~~~~~c~~w~gv~C~~~~---------~~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L 117 (625)
++..|.| .|..+.|++.. ..++.|+|++|++++..+++.|..+++|++|+|++|.|++..+..|.++++|
T Consensus 5 CP~~C~C-~~~~l~~s~n~l~~iP~~~~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L 83 (220)
T 2v70_A 5 CPEKCRC-EGTTVDCSNQKLNKIPEHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGV 83 (220)
T ss_dssp CCTTCEE-ETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTC
T ss_pred CCCCCEE-CCCEeEeCCCCcccCccCCCCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCC
Confidence 3455666 68888886532 1345677777777766555556777777777777777777666667777777
Q ss_pred ccccccccccCCCCC-CcccccccceecCCCccCCCCCCCCccccccccceecccccccccCCCC--CCCCCcEEEcccC
Q 006922 118 CYLYLQFNNFSGTLP-DFSVWKNLTIINLSDNGFNGTIPRSLSNLTQLEALYLANNSLSGKIPDL--NLPNLQQLNLANN 194 (625)
Q Consensus 118 ~~L~L~~N~l~~~~p-~~~~l~~L~~L~ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~L~l~~N 194 (625)
++|+|++|++++..+ .|..+++|++|+|++|+|++..|..|..+++|++|+|++|+|++..|.. .+++|+.|+|++|
T Consensus 84 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 163 (220)
T 2v70_A 84 NEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLAN 163 (220)
T ss_dssp CEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSC
T ss_pred CEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCc
Confidence 777777777776555 3666777777777777777666677777777777777777777665543 5667777777777
Q ss_pred CCccccc
Q 006922 195 NLSGSIP 201 (625)
Q Consensus 195 ~l~g~~p 201 (625)
++++..+
T Consensus 164 ~l~c~c~ 170 (220)
T 2v70_A 164 PFNCNCY 170 (220)
T ss_dssp CEECSGG
T ss_pred CCcCCCc
Confidence 7765444
No 262
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.79 E-value=3.6e-19 Score=173.90 Aligned_cols=153 Identities=24% Similarity=0.242 Sum_probs=89.7
Q ss_pred CCCCCCCCCCCCCceEeCCCC---------CeEEEEEcCCCCcccccCcccccCCCCccEEEecCCCCCccCCccccccc
Q 006922 45 NWNESTSVCNHWTGVKCSEDG---------KRVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPSDFINLK 115 (625)
Q Consensus 45 ~w~~~~~~c~~w~gv~C~~~~---------~~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~ 115 (625)
-|....+.| .|.+|.|++.+ ..++.|+|++|.+++..| ..|..+++|++|+|++|.|++..+..|.+++
T Consensus 11 ~~~~~~~~C-s~~~v~c~~~~l~~ip~~~~~~L~~L~Ls~n~i~~~~~-~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~ 88 (229)
T 3e6j_A 11 AACPSQCSC-SGTTVDCRSKRHASVPAGIPTNAQILYLHDNQITKLEP-GVFDSLINLKELYLGSNQLGALPVGVFDSLT 88 (229)
T ss_dssp CCCCTTCEE-ETTEEECTTSCCSSCCSCCCTTCSEEECCSSCCCCCCT-TTTTTCTTCCEEECCSSCCCCCCTTTTTTCT
T ss_pred ccCCCCCEE-eCCEeEccCCCcCccCCCCCCCCCEEEcCCCccCccCH-HHhhCccCCcEEECCCCCCCCcChhhcccCC
Confidence 355567778 79999998642 234556666666655333 3356666666666666666554444455666
Q ss_pred ccccccccccccCCCCCC-cccccccceecCCCccCCCCCCCCccccccccceecccccccccCCCC--CCCCCcEEEcc
Q 006922 116 SLCYLYLQFNNFSGTLPD-FSVWKNLTIINLSDNGFNGTIPRSLSNLTQLEALYLANNSLSGKIPDL--NLPNLQQLNLA 192 (625)
Q Consensus 116 ~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~L~l~ 192 (625)
+|++|+|++|+|++..+. |..+++|+.|+|++|+|+ .+|..+..+++|++|+|++|+|++..+.. .+++|+.|+|+
T Consensus 89 ~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~ 167 (229)
T 3e6j_A 89 QLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLF 167 (229)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECT
T ss_pred CcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEee
Confidence 666666666666544442 455666666666666665 45555566666666666666665444432 45566666666
Q ss_pred cCCCcccc
Q 006922 193 NNNLSGSI 200 (625)
Q Consensus 193 ~N~l~g~~ 200 (625)
+|++++..
T Consensus 168 ~N~~~c~c 175 (229)
T 3e6j_A 168 GNPWDCEC 175 (229)
T ss_dssp TSCBCTTB
T ss_pred CCCccCCc
Confidence 66665433
No 263
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.79 E-value=4.4e-19 Score=170.48 Aligned_cols=152 Identities=26% Similarity=0.339 Sum_probs=123.5
Q ss_pred CCCCCCCCCCceEeCCCC---------CeEEEEEcCCCCcccccCcccccCCCCccEEEecCCCCCccCCcccccccccc
Q 006922 48 ESTSVCNHWTGVKCSEDG---------KRVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPSDFINLKSLC 118 (625)
Q Consensus 48 ~~~~~c~~w~gv~C~~~~---------~~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~ 118 (625)
+..|.| .|.+|.|+..+ .+++.|+|++|++++ +++..|..+++|++|+|++|.+++..+..|.++++|+
T Consensus 2 p~~C~C-~~~~v~c~~~~l~~~p~~~~~~l~~L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 79 (208)
T 2o6s_A 2 PSRCSC-SGTTVECYSQGRTSVPTGIPAQTTYLDLETNSLKS-LPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLT 79 (208)
T ss_dssp CTTCEE-ETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCC-CCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCC
T ss_pred cCCCEE-CCCEEEecCCCccCCCCCCCCCCcEEEcCCCccCc-CChhhhcccccCcEEECCCCccCccChhhcCCCCCcC
Confidence 456677 79999998643 257888999998884 5556688899999999999999887666778899999
Q ss_pred cccccccccCCCCCC-cccccccceecCCCccCCCCCCCCccccccccceecccccccccCCCC--CCCCCcEEEcccCC
Q 006922 119 YLYLQFNNFSGTLPD-FSVWKNLTIINLSDNGFNGTIPRSLSNLTQLEALYLANNSLSGKIPDL--NLPNLQQLNLANNN 195 (625)
Q Consensus 119 ~L~L~~N~l~~~~p~-~~~l~~L~~L~ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~L~l~~N~ 195 (625)
+|+|++|++++..+. +..+++|++|+|++|+|++..+..+..+++|+.|+|++|++++..+.. .+++|+.|+|++|+
T Consensus 80 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 159 (208)
T 2o6s_A 80 YLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNP 159 (208)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCC
T ss_pred EEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCC
Confidence 999999999876664 688899999999999998766667888899999999999998766652 68889999999988
Q ss_pred Cccccc
Q 006922 196 LSGSIP 201 (625)
Q Consensus 196 l~g~~p 201 (625)
+++..|
T Consensus 160 ~~~~~~ 165 (208)
T 2o6s_A 160 WDCTCP 165 (208)
T ss_dssp BCCCTT
T ss_pred eecCCC
Confidence 876554
No 264
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.77 E-value=1e-18 Score=169.52 Aligned_cols=149 Identities=26% Similarity=0.344 Sum_probs=72.6
Q ss_pred CCCCCCCCCCCceEeCCCC---------CeEEEEEcCCCCcccccCcccccCCCCccEEEecCCCCCccCCccccccccc
Q 006922 47 NESTSVCNHWTGVKCSEDG---------KRVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPSDFINLKSL 117 (625)
Q Consensus 47 ~~~~~~c~~w~gv~C~~~~---------~~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L 117 (625)
++..|.| .|..|.|++.+ ..++.|+|++|++.+ +++..|..+++|+.|+|++|.|++..|..|.++++|
T Consensus 5 CP~~C~C-~~~~v~c~~~~l~~iP~~l~~~l~~L~l~~n~i~~-i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L 82 (220)
T 2v9t_B 5 CPAACTC-SNNIVDCRGKGLTEIPTNLPETITEIRLEQNTIKV-IPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSL 82 (220)
T ss_dssp SCTTSEE-ETTEEECTTSCCSSCCSSCCTTCCEEECCSSCCCE-ECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSC
T ss_pred CCCCCEE-CCCEEEcCCCCcCcCCCccCcCCCEEECCCCcCCC-cCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCC
Confidence 4556666 68888887532 124444444444443 222334445555555555555544444444455555
Q ss_pred ccccccccccCCCCCC-cccccccceecCCCccCCCCCCCCccccccccceecccccccccCCCC--CCCCCcEEEcccC
Q 006922 118 CYLYLQFNNFSGTLPD-FSVWKNLTIINLSDNGFNGTIPRSLSNLTQLEALYLANNSLSGKIPDL--NLPNLQQLNLANN 194 (625)
Q Consensus 118 ~~L~L~~N~l~~~~p~-~~~l~~L~~L~ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~L~l~~N 194 (625)
++|+|++|+|+...+. |..+++|+.|+|++|+|++..|..|..+++|+.|+|++|+|++..+.. .+++|+.|+|++|
T Consensus 83 ~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 162 (220)
T 2v9t_B 83 NSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQN 162 (220)
T ss_dssp CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCC
Confidence 5555555554433332 344445555555555554444444444445555555555544443331 3444444444444
Q ss_pred CCc
Q 006922 195 NLS 197 (625)
Q Consensus 195 ~l~ 197 (625)
+++
T Consensus 163 ~~~ 165 (220)
T 2v9t_B 163 PFI 165 (220)
T ss_dssp CEE
T ss_pred CcC
Confidence 443
No 265
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.76 E-value=8.8e-19 Score=174.37 Aligned_cols=134 Identities=16% Similarity=0.162 Sum_probs=102.0
Q ss_pred hHcccCCceeEEEEEE-cCCcE--EEEEEeccccCC-------------------------hHHHHHHHHHHHcCCCCce
Q 006922 330 EVLGKGTFGMAYKAIL-EDGTT--VVVKRLKDVNVG-------------------------KRDFEQQMEIVGSIRHENV 381 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~-~~g~~--vavK~l~~~~~~-------------------------~~~~~~e~~~l~~l~h~ni 381 (625)
+.||+|+||.||+|.. .+|+. ||||+++..... ...+.+|++.+.+++|+++
T Consensus 53 ~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 132 (258)
T 1zth_A 53 GVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAKEAGV 132 (258)
T ss_dssp EEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHHhCCC
Confidence 5699999999999997 68999 999997643211 1257889999999988865
Q ss_pred ecceeEEEecCceEEEEEeccC-C----ChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHH-hcCCCCceecCCCC
Q 006922 382 VELKAYYYSKDEKLMVYDYYSL-G----SVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIH-AANGGKLVHGNIKS 455 (625)
Q Consensus 382 v~l~~~~~~~~~~~lv~e~~~~-g----~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH-~~~~~~ivHrDlk~ 455 (625)
....-+.. +..++||||+.+ | +|.+.... .++..+..++.|++.||.||| +.+ |+||||||
T Consensus 133 ~~p~~~~~--~~~~lVmE~~g~~g~~~~~L~~~~~~--------~~~~~~~~i~~qi~~~l~~lH~~~g---ivHrDlkp 199 (258)
T 1zth_A 133 SVPQPYTY--MKNVLLMEFIGEDELPAPTLVELGRE--------LKELDVEGIFNDVVENVKRLYQEAE---LVHADLSE 199 (258)
T ss_dssp CCCCEEEE--ETTEEEEECCEETTEECCBHHHHGGG--------GGGSCHHHHHHHHHHHHHHHHHTSC---EECSSCST
T ss_pred CCCeEEEc--CCCEEEEEecCCCCCccccHHHHhhc--------cChHHHHHHHHHHHHHHHHHHHHCC---EEeCCCCH
Confidence 32222221 367899999953 4 55544322 223456789999999999999 887 99999999
Q ss_pred CCEEeCCCCCeeEeccccccccc
Q 006922 456 SNIFLNSQQYGCVSDLGLTTITS 478 (625)
Q Consensus 456 ~NIll~~~~~~kl~DfGla~~~~ 478 (625)
+|||++. .++|+|||+|....
T Consensus 200 ~NILl~~--~~~liDFG~a~~~~ 220 (258)
T 1zth_A 200 YNIMYID--KVYFIDMGQAVTLR 220 (258)
T ss_dssp TSEEESS--SEEECCCTTCEETT
T ss_pred HHEEEcC--cEEEEECcccccCC
Confidence 9999998 99999999997653
No 266
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.76 E-value=4.1e-19 Score=182.08 Aligned_cols=158 Identities=30% Similarity=0.463 Sum_probs=99.0
Q ss_pred eEEEEEcCCCCcccccCcccccCCCCccEEEecCCCCCccCCccccccc-ccccccccccccCCCCC-C-----------
Q 006922 67 RVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPSDFINLK-SLCYLYLQFNNFSGTLP-D----------- 133 (625)
Q Consensus 67 ~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p-~----------- 133 (625)
.++.|+|++|.+++.+|.. +..+++|++|+|++|.+++.+|..+.+++ +|++|+|++|++++.+| .
T Consensus 126 ~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~L~~L~L 204 (313)
T 1ogq_A 126 TLVTLDFSYNALSGTLPPS-ISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDL 204 (313)
T ss_dssp TCCEEECCSSEEESCCCGG-GGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCSEEEC
T ss_pred CCCEEeCCCCccCCcCChH-HhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCcccEEEC
Confidence 4666777777777766653 77777777777777777766777777766 67777777776665444 2
Q ss_pred ------------cccccccceecCCCccCCCCCCCCccccccccceecccccccccCCCC--CCCCCcEEEcccCCCccc
Q 006922 134 ------------FSVWKNLTIINLSDNGFNGTIPRSLSNLTQLEALYLANNSLSGKIPDL--NLPNLQQLNLANNNLSGS 199 (625)
Q Consensus 134 ------------~~~l~~L~~L~ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~L~l~~N~l~g~ 199 (625)
+..+++|+.|+|++|++++.+|. +..+++|++|+|++|++++.+|.. .+++|+.|+|++|+++|.
T Consensus 205 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 283 (313)
T 1ogq_A 205 SRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGE 283 (313)
T ss_dssp CSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEE
T ss_pred cCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCccccc
Confidence 34445555555555555544333 455556666666666666655542 566677777777777766
Q ss_pred cccc--cccCCCCcccCCCCCCCCCCCCC
Q 006922 200 IPQS--LKRFPSSAFVGNSISFDENLAPR 226 (625)
Q Consensus 200 ~p~~--l~~~~~~~~~~n~~~~~~~~~~~ 226 (625)
+|.. +.++..+.+.+|+..|+.|+.+|
T Consensus 284 ip~~~~l~~L~~l~l~~N~~lc~~p~~~C 312 (313)
T 1ogq_A 284 IPQGGNLQRFDVSAYANNKCLCGSPLPAC 312 (313)
T ss_dssp CCCSTTGGGSCGGGTCSSSEEESTTSSCC
T ss_pred CCCCccccccChHHhcCCCCccCCCCCCC
Confidence 6653 33344456667777777665544
No 267
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.76 E-value=7.8e-19 Score=183.79 Aligned_cols=176 Identities=24% Similarity=0.302 Sum_probs=148.8
Q ss_pred CCCCCCCCCCCCCceEeCCCC---------CeEEEEEcCCCCcccccCccccc-CCCCccEEEecCCCCCccCCcccccc
Q 006922 45 NWNESTSVCNHWTGVKCSEDG---------KRVVAVRLPGVGFSGLIPPNTIS-RLSALKILSLRSNVITGYFPSDFINL 114 (625)
Q Consensus 45 ~w~~~~~~c~~w~gv~C~~~~---------~~v~~l~l~~~~l~g~~~~~~~~-~l~~L~~L~l~~N~l~~~~p~~~~~l 114 (625)
.-|+..|.| .|..|.|++.+ ..++.|+|++|++++. ++..+. ++++|+.|+|++|+|++..|..|.++
T Consensus 10 ~~Cp~~C~C-~~~~l~c~~~~l~~iP~~~~~~l~~L~Ls~N~l~~l-~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l 87 (361)
T 2xot_A 10 VSCPANCLC-ASNILSCSKQQLPNVPQSLPSYTALLDLSHNNLSRL-RAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPV 87 (361)
T ss_dssp TTCCTTCEE-ETTEEECCSSCCSSCCSSCCTTCSEEECCSSCCCEE-CTTSSSSCCTTCCEEECCSSCCCEECTTTTTTC
T ss_pred CCCCCCCEE-CCCEEEeCCCCcCccCccCCCCCCEEECCCCCCCcc-ChhhhhhcccccCEEECCCCcCCccChhhccCC
Confidence 346677777 68999998642 2467899999999875 445577 99999999999999999888889999
Q ss_pred cccccccccccccCCCCC-CcccccccceecCCCccCCCCCCCCccccccccceecccccccccCCCC-----CCCCCcE
Q 006922 115 KSLCYLYLQFNNFSGTLP-DFSVWKNLTIINLSDNGFNGTIPRSLSNLTQLEALYLANNSLSGKIPDL-----NLPNLQQ 188 (625)
Q Consensus 115 ~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~-----~l~~L~~ 188 (625)
++|++|+|++|+|++..+ .|..+++|+.|+|++|+|++..|..|..+++|+.|+|++|+|++..+.. .+++|+.
T Consensus 88 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~ 167 (361)
T 2xot_A 88 PNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLML 167 (361)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCE
T ss_pred CCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCE
Confidence 999999999999997766 5899999999999999999888999999999999999999999755442 4899999
Q ss_pred EEcccCCCccccccccccCCC-----CcccCCCCCCCCC
Q 006922 189 LNLANNNLSGSIPQSLKRFPS-----SAFVGNSISFDEN 222 (625)
Q Consensus 189 L~l~~N~l~g~~p~~l~~~~~-----~~~~~n~~~~~~~ 222 (625)
|+|++|+|++..+..+..++. +.+.+|++.|++.
T Consensus 168 L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~C~C~ 206 (361)
T 2xot_A 168 LDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLECDCK 206 (361)
T ss_dssp EECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEECCHH
T ss_pred EECCCCCCCccCHHHhhhccHhhcceEEecCCCccCCcC
Confidence 999999999655566666653 6788999999864
No 268
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.74 E-value=1e-17 Score=167.87 Aligned_cols=173 Identities=24% Similarity=0.344 Sum_probs=133.9
Q ss_pred CCCCCCCCCC-CCCceEeCCCC---------CeEEEEEcCCCCcccccCcccccCCCCccEEEecCCCCCccCCcccccc
Q 006922 45 NWNESTSVCN-HWTGVKCSEDG---------KRVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPSDFINL 114 (625)
Q Consensus 45 ~w~~~~~~c~-~w~gv~C~~~~---------~~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l 114 (625)
.|....|.|. .|..|.|+..+ ..++.|+|++|++++ +++..|.++++|++|+|++|.++...+..|.++
T Consensus 6 ~~~~~~C~c~~~~~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l 84 (270)
T 2o6q_A 6 KKDGGVCSCNNNKNSVDCSSKKLTAIPSNIPADTKKLDLQSNKLSS-LPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKEL 84 (270)
T ss_dssp GGGTCSBEEETTTTEEECTTSCCSSCCSCCCTTCSEEECCSSCCSC-CCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSC
T ss_pred CCCCCCCEeCCCCCEEEccCCCCCccCCCCCCCCCEEECcCCCCCe-eCHHHhcCCCCCCEEECCCCccCeeChhhhcCC
Confidence 4555555553 46667776432 247788999999885 555569999999999999999998666667899
Q ss_pred cccccccccccccCCCCC-CcccccccceecCCCccCCCCCCCCccccccccceecccccccccCCCC--CCCCCcEEEc
Q 006922 115 KSLCYLYLQFNNFSGTLP-DFSVWKNLTIINLSDNGFNGTIPRSLSNLTQLEALYLANNSLSGKIPDL--NLPNLQQLNL 191 (625)
Q Consensus 115 ~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~L~l 191 (625)
++|++|+|++|++++..+ .|..+++|++|+|++|++++..+..|..+++|++|+|++|++++..+.. .+++|+.|+|
T Consensus 85 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 164 (270)
T 2o6q_A 85 KNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRL 164 (270)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEe
Confidence 999999999999987666 4688899999999999999877778889999999999999998766642 6888999999
Q ss_pred ccCCCccccccccccCCC---CcccCCCCC
Q 006922 192 ANNNLSGSIPQSLKRFPS---SAFVGNSIS 218 (625)
Q Consensus 192 ~~N~l~g~~p~~l~~~~~---~~~~~n~~~ 218 (625)
++|++++..+..+..+++ +.+.+|.+.
T Consensus 165 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 194 (270)
T 2o6q_A 165 YNNQLKRVPEGAFDKLTELKTLKLDNNQLK 194 (270)
T ss_dssp CSSCCSCCCTTTTTTCTTCCEEECCSSCCS
T ss_pred cCCcCcEeChhHhccCCCcCEEECCCCcCC
Confidence 999998666655665554 344555543
No 269
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.73 E-value=1.6e-17 Score=161.03 Aligned_cols=157 Identities=24% Similarity=0.314 Sum_probs=133.2
Q ss_pred CceEeCCCCCeEEEEEcCCCCcccccCcccccCCCCccEEEecCCCCCccCCcccccccccccccccccccCCCCC-Ccc
Q 006922 57 TGVKCSEDGKRVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSGTLP-DFS 135 (625)
Q Consensus 57 ~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~ 135 (625)
.+..|... .+++.+++++ .+|.. +. ++|+.|+|++|.|++..+..|.++++|++|+|++|++++..| .|.
T Consensus 7 ~~C~C~~~-----~v~c~~~~l~-~iP~~-l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~ 77 (220)
T 2v9t_B 7 AACTCSNN-----IVDCRGKGLT-EIPTN-LP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQ 77 (220)
T ss_dssp TTSEEETT-----EEECTTSCCS-SCCSS-CC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTT
T ss_pred CCCEECCC-----EEEcCCCCcC-cCCCc-cC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhh
Confidence 56778642 4778888887 46654 33 789999999999999888899999999999999999998766 699
Q ss_pred cccccceecCCCccCCCCCCCCccccccccceecccccccccCCCC--CCCCCcEEEcccCCCccccccccccCCC---C
Q 006922 136 VWKNLTIINLSDNGFNGTIPRSLSNLTQLEALYLANNSLSGKIPDL--NLPNLQQLNLANNNLSGSIPQSLKRFPS---S 210 (625)
Q Consensus 136 ~l~~L~~L~ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~L~l~~N~l~g~~p~~l~~~~~---~ 210 (625)
.+++|++|+|++|+|+...+..|..+++|++|+|++|+|++..|.. .+++|+.|+|++|+|++..+..+..++. +
T Consensus 78 ~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 157 (220)
T 2v9t_B 78 GLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTM 157 (220)
T ss_dssp TCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEE
T ss_pred CCcCCCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEE
Confidence 9999999999999999665566899999999999999999887764 7899999999999999777776766554 5
Q ss_pred cccCCCCCCCCC
Q 006922 211 AFVGNSISFDEN 222 (625)
Q Consensus 211 ~~~~n~~~~~~~ 222 (625)
.+.+|++.|++.
T Consensus 158 ~L~~N~~~c~c~ 169 (220)
T 2v9t_B 158 HLAQNPFICDCH 169 (220)
T ss_dssp ECCSSCEECSGG
T ss_pred EeCCCCcCCCCc
Confidence 678999998764
No 270
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.73 E-value=1.8e-18 Score=164.11 Aligned_cols=127 Identities=27% Similarity=0.323 Sum_probs=108.2
Q ss_pred EcCCCCcccccCcccccCCCCccEEEecCCCCCccCCc-ccccccccccccccccccCCCCC-CcccccccceecCCCcc
Q 006922 72 RLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPS-DFINLKSLCYLYLQFNNFSGTLP-DFSVWKNLTIINLSDNG 149 (625)
Q Consensus 72 ~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~ls~N~ 149 (625)
+++++++ +.+|.. +. .+|++|+|++|.|++..+. .|.++++|++|+|++|++++..| .|..+++|++|+|++|+
T Consensus 14 ~~s~~~l-~~ip~~-~~--~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 89 (192)
T 1w8a_A 14 DCTGRGL-KEIPRD-IP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENK 89 (192)
T ss_dssp ECTTSCC-SSCCSC-CC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCC
T ss_pred EcCCCCc-CcCccC-CC--CCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCc
Confidence 3444555 356654 33 3899999999999987664 48999999999999999998877 68999999999999999
Q ss_pred CCCCCCCCccccccccceecccccccccCCCC--CCCCCcEEEcccCCCcccccc
Q 006922 150 FNGTIPRSLSNLTQLEALYLANNSLSGKIPDL--NLPNLQQLNLANNNLSGSIPQ 202 (625)
Q Consensus 150 l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~L~l~~N~l~g~~p~ 202 (625)
|++..|..|..+++|++|+|++|+|++.+|.. .+++|+.|+|++|++++..+.
T Consensus 90 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l 144 (192)
T 1w8a_A 90 IKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHL 144 (192)
T ss_dssp CCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGG
T ss_pred CCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcc
Confidence 99888888999999999999999999988864 789999999999999987663
No 271
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.73 E-value=1.5e-17 Score=161.39 Aligned_cols=158 Identities=19% Similarity=0.229 Sum_probs=134.7
Q ss_pred CCceEeCCCCCeEEEEEcCCCCcccccCcccccCCCCccEEEecCCCCCccCC-cccccccccccccccccccCCCCC-C
Q 006922 56 WTGVKCSEDGKRVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFP-SDFINLKSLCYLYLQFNNFSGTLP-D 133 (625)
Q Consensus 56 w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p-~ 133 (625)
-.+..|... .+++++++++. +|.. + ...+++|+|++|.|++..| ..|.++++|+.|+|++|++++..+ .
T Consensus 6 P~~C~C~~~-----~l~~s~n~l~~-iP~~-~--~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~ 76 (220)
T 2v70_A 6 PEKCRCEGT-----TVDCSNQKLNK-IPEH-I--PQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGA 76 (220)
T ss_dssp CTTCEEETT-----EEECCSSCCSS-CCSC-C--CTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTT
T ss_pred CCCCEECCC-----EeEeCCCCccc-CccC-C--CCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHH
Confidence 356777642 68899999874 6654 3 3457899999999998755 458999999999999999998777 6
Q ss_pred cccccccceecCCCccCCCCCCCCccccccccceecccccccccCCCC--CCCCCcEEEcccCCCccccccccccCCC--
Q 006922 134 FSVWKNLTIINLSDNGFNGTIPRSLSNLTQLEALYLANNSLSGKIPDL--NLPNLQQLNLANNNLSGSIPQSLKRFPS-- 209 (625)
Q Consensus 134 ~~~l~~L~~L~ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~L~l~~N~l~g~~p~~l~~~~~-- 209 (625)
|..+++|++|+|++|+|++..+..|..+++|++|+|++|+|++..|.. .+++|+.|+|++|+|++..|..+..+++
T Consensus 77 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 156 (220)
T 2v70_A 77 FEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLS 156 (220)
T ss_dssp TTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCC
T ss_pred hCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCC
Confidence 999999999999999999888888999999999999999999987763 7899999999999999888988877665
Q ss_pred -CcccCCCCCCCCC
Q 006922 210 -SAFVGNSISFDEN 222 (625)
Q Consensus 210 -~~~~~n~~~~~~~ 222 (625)
+.+.+|++.|+++
T Consensus 157 ~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 157 TLNLLANPFNCNCY 170 (220)
T ss_dssp EEECCSCCEECSGG
T ss_pred EEEecCcCCcCCCc
Confidence 5677899988764
No 272
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.71 E-value=5.1e-17 Score=162.93 Aligned_cols=153 Identities=24% Similarity=0.258 Sum_probs=133.1
Q ss_pred CeEEEEEcCCCCcccccCcccccCCCCccEEEecCCCCCccCCcccccccccccccccccccCCCCCC-cccccccceec
Q 006922 66 KRVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSGTLPD-FSVWKNLTIIN 144 (625)
Q Consensus 66 ~~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~ 144 (625)
..++.|+|++|.+.+. + .+..+++|++|+|++|.+++..+..|.++++|++|+|++|++++..+. +..+++|++|+
T Consensus 63 ~~L~~L~l~~n~l~~~--~-~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 139 (272)
T 3rfs_A 63 PNVRYLALGGNKLHDI--S-ALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLN 139 (272)
T ss_dssp TTCCEEECTTSCCCCC--G-GGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCcEEECCCCCCCCc--h-hhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEE
Confidence 3588999999999873 3 599999999999999999998887889999999999999999987774 78999999999
Q ss_pred CCCccCCCCCCCCccccccccceecccccccccCCCC--CCCCCcEEEcccCCCccccccccccCCC---CcccCCCCCC
Q 006922 145 LSDNGFNGTIPRSLSNLTQLEALYLANNSLSGKIPDL--NLPNLQQLNLANNNLSGSIPQSLKRFPS---SAFVGNSISF 219 (625)
Q Consensus 145 ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~L~l~~N~l~g~~p~~l~~~~~---~~~~~n~~~~ 219 (625)
|++|++++..+..+..+++|+.|+|++|++++..+.. .+++|+.|+|++|++++..|..+..++. +.+.+|++.|
T Consensus 140 L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 219 (272)
T 3rfs_A 140 LAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC 219 (272)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred CCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccc
Confidence 9999999777777899999999999999999877753 7899999999999999877776666655 5667788776
Q ss_pred CC
Q 006922 220 DE 221 (625)
Q Consensus 220 ~~ 221 (625)
..
T Consensus 220 ~~ 221 (272)
T 3rfs_A 220 TC 221 (272)
T ss_dssp CT
T ss_pred cC
Confidence 54
No 273
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.71 E-value=2.9e-17 Score=164.57 Aligned_cols=162 Identities=26% Similarity=0.357 Sum_probs=133.0
Q ss_pred CCCCCCCceEeCCCCCeEEEEEcCCCCcccccCcccccCCCCccEEEecCCCCCccCCcccccccccccccccccccCCC
Q 006922 51 SVCNHWTGVKCSEDGKRVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSGT 130 (625)
Q Consensus 51 ~~c~~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 130 (625)
+.| .|.|+.|+... .+..+++++++++. +|.. +. ++|+.|+|++|.+++..+..|.++++|++|+|++|+++..
T Consensus 3 ~~C-~~~~~~C~c~~-~~~~l~~~~~~l~~-ip~~-~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i 76 (270)
T 2o6q_A 3 ALC-KKDGGVCSCNN-NKNSVDCSSKKLTA-IPSN-IP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTL 76 (270)
T ss_dssp CCB-GGGTCSBEEET-TTTEEECTTSCCSS-CCSC-CC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCC
T ss_pred ccC-CCCCCCCEeCC-CCCEEEccCCCCCc-cCCC-CC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCee
Confidence 455 89999987643 35678999999984 6654 33 6899999999999987777899999999999999999966
Q ss_pred CCC-cccccccceecCCCccCCCCCCCCccccccccceecccccccccCCCC--CCCCCcEEEcccCCCccccccccccC
Q 006922 131 LPD-FSVWKNLTIINLSDNGFNGTIPRSLSNLTQLEALYLANNSLSGKIPDL--NLPNLQQLNLANNNLSGSIPQSLKRF 207 (625)
Q Consensus 131 ~p~-~~~l~~L~~L~ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~L~l~~N~l~g~~p~~l~~~ 207 (625)
.+. |..+++|++|+|++|++++..+..+..+++|++|+|++|++++..+.. .+++|+.|+|++|++++..+..+..+
T Consensus 77 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l 156 (270)
T 2o6q_A 77 PAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKL 156 (270)
T ss_dssp CTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTC
T ss_pred ChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCC
Confidence 654 688999999999999999776777899999999999999999877753 78999999999999996655556665
Q ss_pred CC---CcccCCCCC
Q 006922 208 PS---SAFVGNSIS 218 (625)
Q Consensus 208 ~~---~~~~~n~~~ 218 (625)
++ +.+.+|.+.
T Consensus 157 ~~L~~L~L~~n~l~ 170 (270)
T 2o6q_A 157 TSLKELRLYNNQLK 170 (270)
T ss_dssp TTCCEEECCSSCCS
T ss_pred cccceeEecCCcCc
Confidence 55 445566543
No 274
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.70 E-value=2.3e-17 Score=168.37 Aligned_cols=159 Identities=20% Similarity=0.305 Sum_probs=95.5
Q ss_pred CCCCCCCCCCCceEeCCCC---------CeEEEEEcCCCCcccccCcccccCCCCccEEEecCCCCCcc--CCccccccc
Q 006922 47 NESTSVCNHWTGVKCSEDG---------KRVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGY--FPSDFINLK 115 (625)
Q Consensus 47 ~~~~~~c~~w~gv~C~~~~---------~~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~~--~p~~~~~l~ 115 (625)
++..|.| .|.+|.|++.+ ..++.|+|++|++. .+|+..|.++++|++|+|++|.++.. .|..+..++
T Consensus 1 CP~~C~C-~~~~l~c~~~~l~~ip~~~~~~l~~L~L~~n~l~-~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~ 78 (306)
T 2z66_A 1 CPSRCSC-SGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQ-SLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTT 78 (306)
T ss_dssp CCTTCEE-ETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCC-CCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCS
T ss_pred CcCCCee-CCCEEEcCCCCcccCCCCCCCCCCEEECCCCccC-ccCHhHhhccccCCEEECCCCccCcccCccccccccc
Confidence 3455666 79999998643 36889999999998 67777789999999999999998732 244455555
Q ss_pred ccccccccccccCCCCCCcccccccceecCCCccCCCCCC-CCccccccccceecccccccccCCCC--CCCCCcEEEcc
Q 006922 116 SLCYLYLQFNNFSGTLPDFSVWKNLTIINLSDNGFNGTIP-RSLSNLTQLEALYLANNSLSGKIPDL--NLPNLQQLNLA 192 (625)
Q Consensus 116 ~L~~L~L~~N~l~~~~p~~~~l~~L~~L~ls~N~l~~~~p-~~l~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~L~l~ 192 (625)
+|++|+|++|.++...+.+..+++|++|++++|++++..+ ..+..+++|++|++++|.+++..+.. .+++|+.|+|+
T Consensus 79 ~L~~L~Ls~n~i~~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 158 (306)
T 2z66_A 79 SLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMA 158 (306)
T ss_dssp CCCEEECCSCSEEEEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECT
T ss_pred ccCEEECCCCccccChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECC
Confidence 6666666666555333344455555555555555543322 34445555555555555554444432 34455555555
Q ss_pred cCCCcc-ccccccccC
Q 006922 193 NNNLSG-SIPQSLKRF 207 (625)
Q Consensus 193 ~N~l~g-~~p~~l~~~ 207 (625)
+|.+++ .+|..+..+
T Consensus 159 ~n~l~~~~~~~~~~~l 174 (306)
T 2z66_A 159 GNSFQENFLPDIFTEL 174 (306)
T ss_dssp TCEEGGGEECSCCTTC
T ss_pred CCccccccchhHHhhC
Confidence 555543 334444333
No 275
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.70 E-value=1e-16 Score=156.39 Aligned_cols=156 Identities=26% Similarity=0.367 Sum_probs=129.6
Q ss_pred CCceEeCCCCCeEEEEEcCCCCcccccCcccccCCCCccEEEecCCCCCccCCcccccccccccccccccccCCCCC-Cc
Q 006922 56 WTGVKCSEDGKRVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSGTLP-DF 134 (625)
Q Consensus 56 w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~ 134 (625)
|..-.|+.. .++..++++. .+|.. + .++|++|+|++|.|++..|..|.++++|++|+|++|+|+...+ .|
T Consensus 14 ~~~~~Cs~~-----~v~c~~~~l~-~ip~~-~--~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~ 84 (229)
T 3e6j_A 14 PSQCSCSGT-----TVDCRSKRHA-SVPAG-I--PTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVF 84 (229)
T ss_dssp CTTCEEETT-----EEECTTSCCS-SCCSC-C--CTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTT
T ss_pred CCCCEEeCC-----EeEccCCCcC-ccCCC-C--CCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhc
Confidence 455678643 3777888876 56654 3 3899999999999999889999999999999999999986665 47
Q ss_pred ccccccceecCCCccCCCCCCCCccccccccceecccccccccCCC-C-CCCCCcEEEcccCCCccccccccccCCC---
Q 006922 135 SVWKNLTIINLSDNGFNGTIPRSLSNLTQLEALYLANNSLSGKIPD-L-NLPNLQQLNLANNNLSGSIPQSLKRFPS--- 209 (625)
Q Consensus 135 ~~l~~L~~L~ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~-~-~l~~L~~L~l~~N~l~g~~p~~l~~~~~--- 209 (625)
..+++|++|+|++|+|++..+..|..+++|+.|+|++|+|+ .+|. . .+++|+.|+|++|+|++..+..+..+++
T Consensus 85 ~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 163 (229)
T 3e6j_A 85 DSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTH 163 (229)
T ss_dssp TTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred ccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCE
Confidence 89999999999999999777777899999999999999999 4554 3 7899999999999999666666665554
Q ss_pred CcccCCCCCCCC
Q 006922 210 SAFVGNSISFDE 221 (625)
Q Consensus 210 ~~~~~n~~~~~~ 221 (625)
+.+.+|++.|.+
T Consensus 164 L~l~~N~~~c~c 175 (229)
T 3e6j_A 164 AYLFGNPWDCEC 175 (229)
T ss_dssp EECTTSCBCTTB
T ss_pred EEeeCCCccCCc
Confidence 567789988875
No 276
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.70 E-value=1.8e-17 Score=171.05 Aligned_cols=140 Identities=20% Similarity=0.328 Sum_probs=109.5
Q ss_pred eEEEEEcCCCCcccccCcccccCCCCccEEEecCCCCCccCCccccc---------ccccccccccccccCCCCC-Cccc
Q 006922 67 RVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPSDFIN---------LKSLCYLYLQFNNFSGTLP-DFSV 136 (625)
Q Consensus 67 ~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~---------l~~L~~L~L~~N~l~~~~p-~~~~ 136 (625)
.++.|+|++|.+. .+|+. ++++++|++|+|++|++.+.+|..+.. +++|++|+|++|+++ .+| .+..
T Consensus 128 ~L~~L~Ls~n~l~-~lp~~-l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~ 204 (328)
T 4fcg_A 128 GLETLTLARNPLR-ALPAS-IASLNRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIAN 204 (328)
T ss_dssp TCSEEEEESCCCC-CCCGG-GGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGG
T ss_pred CCCEEECCCCccc-cCcHH-HhcCcCCCEEECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcC
Confidence 5778888888888 67654 888888888888888888778877654 888888888888887 444 6777
Q ss_pred ccccceecCCCccCCCCCCCCccccccccceecccccccccCCCC--CCCCCcEEEcccCCCccccccccccCCCC
Q 006922 137 WKNLTIINLSDNGFNGTIPRSLSNLTQLEALYLANNSLSGKIPDL--NLPNLQQLNLANNNLSGSIPQSLKRFPSS 210 (625)
Q Consensus 137 l~~L~~L~ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~L~l~~N~l~g~~p~~l~~~~~~ 210 (625)
+++|++|+|++|++++ +|..+..+++|++|+|++|++.+.+|.. .+++|+.|+|++|++.+.+|..+..++.+
T Consensus 205 l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L 279 (328)
T 4fcg_A 205 LQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQL 279 (328)
T ss_dssp CTTCCEEEEESSCCCC-CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTC
T ss_pred CCCCCEEEccCCCCCc-CchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCC
Confidence 8888888888888874 5667788888888888888888777763 67788888888888888888777766654
No 277
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.69 E-value=4.2e-17 Score=164.63 Aligned_cols=143 Identities=21% Similarity=0.277 Sum_probs=103.8
Q ss_pred eEEEEEcCCCCcccccCcccccCCCCccEEEecCCC-CCccCCcccccccccccccccccccCCCCC-Ccccccccceec
Q 006922 67 RVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNV-ITGYFPSDFINLKSLCYLYLQFNNFSGTLP-DFSVWKNLTIIN 144 (625)
Q Consensus 67 ~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~-l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~ 144 (625)
.++.|+|++|.+++..+ ..|..+++|++|+|++|. ++...|..|.++++|++|+|++|.+++..| .+..+++|++|+
T Consensus 57 ~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 135 (285)
T 1ozn_A 57 NLTILWLHSNVLARIDA-AAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLY 135 (285)
T ss_dssp TCCEEECCSSCCCEECT-TTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCEEECCCCccceeCH-hhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEE
Confidence 57777888877776544 357778888888888886 776667777778888888888888776655 467777788888
Q ss_pred CCCccCCCCCCCCccccccccceecccccccccCCC-C-CCCCCcEEEcccCCCccccccccccCCCC
Q 006922 145 LSDNGFNGTIPRSLSNLTQLEALYLANNSLSGKIPD-L-NLPNLQQLNLANNNLSGSIPQSLKRFPSS 210 (625)
Q Consensus 145 ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~-~-~l~~L~~L~l~~N~l~g~~p~~l~~~~~~ 210 (625)
|++|++++..+..+..+++|++|+|++|++++..+. . .+++|+.|+|++|++++..|..+..++.+
T Consensus 136 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 203 (285)
T 1ozn_A 136 LQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRL 203 (285)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTC
T ss_pred CCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccc
Confidence 888887765556677777788888888877765554 2 57777777777777777667766655543
No 278
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.68 E-value=1.4e-16 Score=160.89 Aligned_cols=170 Identities=26% Similarity=0.336 Sum_probs=139.3
Q ss_pred CCCCCCCC--CCCceEeCCCC---------CeEEEEEcCCCCcccccCcccccCCCCccEEEecCCCCCccCCccccccc
Q 006922 47 NESTSVCN--HWTGVKCSEDG---------KRVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPSDFINLK 115 (625)
Q Consensus 47 ~~~~~~c~--~w~gv~C~~~~---------~~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~ 115 (625)
|+..|.|. .+..|.|+..+ ..++.|+|+++++++ ++++.|..+++|++|+|++|.+++..|..|.+++
T Consensus 2 CP~~C~C~~~~~~~~~c~~~~l~~ip~~~~~~l~~L~l~~n~i~~-~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~ 80 (285)
T 1ozn_A 2 CPGACVCYNEPKVTTSCPQQGLQAVPVGIPAASQRIFLHGNRISH-VPAASFRACRNLTILWLHSNVLARIDAAAFTGLA 80 (285)
T ss_dssp CCTTCEEECSSSCEEECCSSCCSSCCTTCCTTCSEEECTTSCCCE-ECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCT
T ss_pred cCCCceECCCCCeEEEcCcCCcccCCcCCCCCceEEEeeCCcCCc-cCHHHcccCCCCCEEECCCCccceeCHhhcCCcc
Confidence 34556663 22447786532 357889999999986 4555699999999999999999998899999999
Q ss_pred ccccccccccc-cCCCCC-CcccccccceecCCCccCCCCCCCCccccccccceecccccccccCCCC--CCCCCcEEEc
Q 006922 116 SLCYLYLQFNN-FSGTLP-DFSVWKNLTIINLSDNGFNGTIPRSLSNLTQLEALYLANNSLSGKIPDL--NLPNLQQLNL 191 (625)
Q Consensus 116 ~L~~L~L~~N~-l~~~~p-~~~~l~~L~~L~ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~L~l 191 (625)
+|++|+|++|. +....| .+..+++|++|+|++|++++..|..+..+++|++|+|++|++++..+.. .+++|+.|+|
T Consensus 81 ~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 160 (285)
T 1ozn_A 81 LLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFL 160 (285)
T ss_dssp TCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEEC
Confidence 99999999997 776655 6889999999999999999888889999999999999999999877653 7899999999
Q ss_pred ccCCCccccccccccCCCC---cccCCCC
Q 006922 192 ANNNLSGSIPQSLKRFPSS---AFVGNSI 217 (625)
Q Consensus 192 ~~N~l~g~~p~~l~~~~~~---~~~~n~~ 217 (625)
++|++++..+..+..++.+ .+.+|.+
T Consensus 161 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 189 (285)
T 1ozn_A 161 HGNRISSVPERAFRGLHSLDRLLLHQNRV 189 (285)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred CCCcccccCHHHhcCccccCEEECCCCcc
Confidence 9999996655567666554 4555553
No 279
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.68 E-value=3.6e-17 Score=170.57 Aligned_cols=163 Identities=26% Similarity=0.357 Sum_probs=133.3
Q ss_pred CCCCCCCCCCCCCceEeCCCC-----------CeEEEEEcCCCCcccccCcccccCCCCccEEEecCCCCCccCCccccc
Q 006922 45 NWNESTSVCNHWTGVKCSEDG-----------KRVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPSDFIN 113 (625)
Q Consensus 45 ~w~~~~~~c~~w~gv~C~~~~-----------~~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~ 113 (625)
.|+...+.| .|.|+ |+..+ ..++.|+|++|++++ +++..|.++++|++|+|++|.+++..|..|.+
T Consensus 22 ~~~~~~~~C-~~~~~-c~~~~~~l~~iP~~~~~~L~~L~l~~n~i~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 98 (353)
T 2z80_A 22 SSNQASLSC-DRNGI-CKGSSGSLNSIPSGLTEAVKSLDLSNNRITY-ISNSDLQRCVNLQALVLTSNGINTIEEDSFSS 98 (353)
T ss_dssp -----CCEE-CTTSE-EECCSTTCSSCCTTCCTTCCEEECTTSCCCE-ECTTTTTTCTTCCEEECTTSCCCEECTTTTTT
T ss_pred CCCccCCCC-CCCeE-eeCCCCCcccccccccccCcEEECCCCcCcc-cCHHHhccCCCCCEEECCCCccCccCHhhcCC
Confidence 455556667 79887 65321 368899999999986 55556999999999999999999988888999
Q ss_pred ccccccccccccccCCCCCC-cccccccceecCCCccCCCCCCC--Cccccccccceeccccc-ccccCCCC--CCCCCc
Q 006922 114 LKSLCYLYLQFNNFSGTLPD-FSVWKNLTIINLSDNGFNGTIPR--SLSNLTQLEALYLANNS-LSGKIPDL--NLPNLQ 187 (625)
Q Consensus 114 l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~ls~N~l~~~~p~--~l~~l~~L~~L~l~~N~-l~~~~p~~--~l~~L~ 187 (625)
+++|++|+|++|++++..+. +..+++|++|+|++|++++ +|. .+..+++|++|++++|+ +++..+.. .+++|+
T Consensus 99 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~ 177 (353)
T 2z80_A 99 LGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKT-LGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLE 177 (353)
T ss_dssp CTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSS-SCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEE
T ss_pred CCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcc-cCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCC
Confidence 99999999999999976654 8899999999999999995 554 78999999999999994 66655543 788999
Q ss_pred EEEcccCCCccccccccccCCCCc
Q 006922 188 QLNLANNNLSGSIPQSLKRFPSSA 211 (625)
Q Consensus 188 ~L~l~~N~l~g~~p~~l~~~~~~~ 211 (625)
.|++++|++++..|..+..++.+.
T Consensus 178 ~L~l~~n~l~~~~~~~l~~l~~L~ 201 (353)
T 2z80_A 178 ELEIDASDLQSYEPKSLKSIQNVS 201 (353)
T ss_dssp EEEEEETTCCEECTTTTTTCSEEE
T ss_pred EEECCCCCcCccCHHHHhccccCC
Confidence 999999999988888888777643
No 280
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.68 E-value=7.8e-17 Score=175.04 Aligned_cols=170 Identities=22% Similarity=0.239 Sum_probs=143.4
Q ss_pred CCCCCCCC-CCCceEeCCCC---------CeEEEEEcCCCCcccccCcccccCCCCccEEEecCCCCCccCCcccccccc
Q 006922 47 NESTSVCN-HWTGVKCSEDG---------KRVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPSDFINLKS 116 (625)
Q Consensus 47 ~~~~~~c~-~w~gv~C~~~~---------~~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~ 116 (625)
|+..|.|. .|..|.|+..+ ..++.|+|++|++++..+ ..|.++++|++|+|++|.+++..|..|.++++
T Consensus 3 Cp~~C~C~~~~~~v~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~ 81 (477)
T 2id5_A 3 CPPRCECSAQDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQ-DEFASFPHLEELELNENIVSAVEPGAFNNLFN 81 (477)
T ss_dssp CSTTCEEETTTTEEECCSCCCSSCCSCCCTTCSEEECCSSCCCEECT-TTTTTCTTCCEEECTTSCCCEECTTTTTTCTT
T ss_pred ccCCCeECCCCCEEEeCCCCcCcCCCCCCCCCcEEECCCCccceECH-hHccCCCCCCEEECCCCccCEeChhhhhCCcc
Confidence 45667774 57899998642 357889999999997554 46999999999999999999988999999999
Q ss_pred cccccccccccCCCCC-CcccccccceecCCCccCCCCCCCCccccccccceecccccccccCCCC--CCCCCcEEEccc
Q 006922 117 LCYLYLQFNNFSGTLP-DFSVWKNLTIINLSDNGFNGTIPRSLSNLTQLEALYLANNSLSGKIPDL--NLPNLQQLNLAN 193 (625)
Q Consensus 117 L~~L~L~~N~l~~~~p-~~~~l~~L~~L~ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~L~l~~ 193 (625)
|++|+|++|++++..+ .|..+++|++|+|++|++++..|..|..+++|+.|+|++|.+++..+.. .+++|+.|+|++
T Consensus 82 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 161 (477)
T 2id5_A 82 LRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEK 161 (477)
T ss_dssp CCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEES
T ss_pred CCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCC
Confidence 9999999999997666 4789999999999999999888999999999999999999999877753 789999999999
Q ss_pred CCCccccccccccCCCC---cccCCCC
Q 006922 194 NNLSGSIPQSLKRFPSS---AFVGNSI 217 (625)
Q Consensus 194 N~l~g~~p~~l~~~~~~---~~~~n~~ 217 (625)
|++++..+..+..++.+ .+.+|.+
T Consensus 162 n~l~~~~~~~l~~l~~L~~L~l~~n~i 188 (477)
T 2id5_A 162 CNLTSIPTEALSHLHGLIVLRLRHLNI 188 (477)
T ss_dssp CCCSSCCHHHHTTCTTCCEEEEESCCC
T ss_pred CcCcccChhHhcccCCCcEEeCCCCcC
Confidence 99997666666665554 4445543
No 281
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.67 E-value=1.8e-16 Score=148.08 Aligned_cols=137 Identities=28% Similarity=0.357 Sum_probs=114.7
Q ss_pred CCCCCCCCCCceEeCCCCCeEEEEEcCCCCcccccCcccccCCCCccEEEecCCCCCccCCccccccccccccccccccc
Q 006922 48 ESTSVCNHWTGVKCSEDGKRVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNF 127 (625)
Q Consensus 48 ~~~~~c~~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 127 (625)
+..|.| +|.+|.|+.. ++. .+|.. ..++|+.|+|++|.+++..+..|.++++|++|+|++|++
T Consensus 2 p~~C~C-~~~~l~~~~~------------~l~-~~p~~---~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 64 (177)
T 2o6r_A 2 PSRCSC-SGTEIRCNSK------------GLT-SVPTG---IPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQI 64 (177)
T ss_dssp CTTCEE-ETTEEECCSS------------CCS-SCCTT---CCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCC
T ss_pred cCCCEe-CCCEEEecCC------------CCc-cCCCC---CCCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcc
Confidence 445666 7999998753 222 34432 246899999999999987777789999999999999999
Q ss_pred CCCCCC-cccccccceecCCCccCCCCCCCCccccccccceecccccccccCCCC--CCCCCcEEEcccCCCccccc
Q 006922 128 SGTLPD-FSVWKNLTIINLSDNGFNGTIPRSLSNLTQLEALYLANNSLSGKIPDL--NLPNLQQLNLANNNLSGSIP 201 (625)
Q Consensus 128 ~~~~p~-~~~l~~L~~L~ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~L~l~~N~l~g~~p 201 (625)
++..+. +..+++|+.|+|++|+|++..+..+..+++|++|+|++|++++.++.. .+++|+.|+|++|++++..|
T Consensus 65 ~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 65 QSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred eEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 977664 789999999999999999777777899999999999999999776653 68999999999999998776
No 282
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.67 E-value=2.5e-16 Score=159.46 Aligned_cols=148 Identities=25% Similarity=0.226 Sum_probs=97.1
Q ss_pred eEEEEEcCCCCcccccCcccccCCCCccEEEecCCCCCccCCcccccccccccccccccccCCCCCCcccccccceecCC
Q 006922 67 RVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSGTLPDFSVWKNLTIINLS 146 (625)
Q Consensus 67 ~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~ls 146 (625)
.++.|+|++|.+++..+ ..|..+++|++|+|++|.|++..+ ...+++|++|+|++|+++.....+..+++|++|+|+
T Consensus 32 ~l~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~L~~L~l~ 108 (290)
T 1p9a_G 32 DTTILHLSENLLYTFSL-ATLMPYTRLTQLNLDRAELTKLQV--DGTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVS 108 (290)
T ss_dssp TCCEEECTTSCCSEEEG-GGGTTCTTCCEEECTTSCCCEEEC--CSCCTTCCEEECCSSCCSSCCCCTTTCTTCCEEECC
T ss_pred CCCEEEcCCCcCCccCH-HHhhcCCCCCEEECCCCccCcccC--CCCCCcCCEEECCCCcCCcCchhhccCCCCCEEECC
Confidence 56778888888876544 458888888888888888776433 266777777777777776433356667777777777
Q ss_pred CccCCCCCCCCccccccccceecccccccccCCCC--CCCCCcEEEcccCCCccccccccccCCC---CcccCCCC
Q 006922 147 DNGFNGTIPRSLSNLTQLEALYLANNSLSGKIPDL--NLPNLQQLNLANNNLSGSIPQSLKRFPS---SAFVGNSI 217 (625)
Q Consensus 147 ~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~L~l~~N~l~g~~p~~l~~~~~---~~~~~n~~ 217 (625)
+|+|++..|..|..+++|++|+|++|++++.++.. .+++|+.|+|++|+|++..+..+..+++ +.+.+|.+
T Consensus 109 ~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l 184 (290)
T 1p9a_G 109 FNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSL 184 (290)
T ss_dssp SSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCC
T ss_pred CCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcC
Confidence 77777555566777777777777777777655542 5667777777777776433333343333 34444443
No 283
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.67 E-value=5.5e-17 Score=179.41 Aligned_cols=156 Identities=24% Similarity=0.307 Sum_probs=135.6
Q ss_pred CCCCCCceEeCCCC-----------CeEEEEEcCCCCcccccCcccccCCCCccEEEecCCCCCccCCcccccccccccc
Q 006922 52 VCNHWTGVKCSEDG-----------KRVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPSDFINLKSLCYL 120 (625)
Q Consensus 52 ~c~~w~gv~C~~~~-----------~~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L 120 (625)
.| .|.|| |+..+ ..++.|+|++|.+++..| ..|.++++|++|+|++|.+++..|..|.++++|++|
T Consensus 3 ~C-~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~-~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 79 (549)
T 2z81_A 3 SC-DASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGH-GDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHL 79 (549)
T ss_dssp EE-CTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEECS-STTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred cC-CCCce-EECCCCccccccccCCCCccEEECcCCccCccCh-hhhhcCCcccEEECCCCCcCccChhhccccccCCEE
Confidence 35 79998 86532 368999999999987655 459999999999999999999888999999999999
Q ss_pred cccccccCCCCCC-cccccccceecCCCccCCC-CCCCCccccccccceecccccccccCCC--C-CCCCCcEEEcccCC
Q 006922 121 YLQFNNFSGTLPD-FSVWKNLTIINLSDNGFNG-TIPRSLSNLTQLEALYLANNSLSGKIPD--L-NLPNLQQLNLANNN 195 (625)
Q Consensus 121 ~L~~N~l~~~~p~-~~~l~~L~~L~ls~N~l~~-~~p~~l~~l~~L~~L~l~~N~l~~~~p~--~-~l~~L~~L~l~~N~ 195 (625)
+|++|++++.+|. ++.+++|++|+|++|++++ .+|..++++++|++|++++|++.+.+|. . .+++|+.|++++|+
T Consensus 80 ~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~ 159 (549)
T 2z81_A 80 DLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALS 159 (549)
T ss_dssp ECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETT
T ss_pred ECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCc
Confidence 9999999988875 9999999999999999986 4678899999999999999996555653 2 78999999999999
Q ss_pred CccccccccccCCCC
Q 006922 196 LSGSIPQSLKRFPSS 210 (625)
Q Consensus 196 l~g~~p~~l~~~~~~ 210 (625)
+++.+|..+..++.+
T Consensus 160 l~~~~~~~l~~l~~L 174 (549)
T 2z81_A 160 LRNYQSQSLKSIRDI 174 (549)
T ss_dssp CCEECTTTTTTCSEE
T ss_pred ccccChhhhhccccC
Confidence 999999888776653
No 284
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.67 E-value=2.6e-16 Score=149.14 Aligned_cols=174 Identities=21% Similarity=0.263 Sum_probs=133.9
Q ss_pred CCCCCCCCCCCceEeCCCC---------CeEEEEEcCCCCcccccCcccccCCCCccEEEecCCCCCccCCccccccccc
Q 006922 47 NESTSVCNHWTGVKCSEDG---------KRVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPSDFINLKSL 117 (625)
Q Consensus 47 ~~~~~~c~~w~gv~C~~~~---------~~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L 117 (625)
++..|.| .|..+.|++.+ ..++.|+|++|.+.+..+...|+.+++|++|+|++|.|++..|..|.++++|
T Consensus 2 CP~~C~C-~~~~l~~s~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 80 (192)
T 1w8a_A 2 CPAMCHC-EGTTVDCTGRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHI 80 (192)
T ss_dssp CCTTSEE-ETTEEECTTSCCSSCCSCCCTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTC
T ss_pred cCCCCEE-CCCEEEcCCCCcCcCccCCCCCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccC
Confidence 3456667 79999998642 2678899999999876655568999999999999999999889999999999
Q ss_pred ccccccccccCCCCCC-cccccccceecCCCccCCCCCCCCccccccccceecccccccccCCCCCC-CCCcEEEcccCC
Q 006922 118 CYLYLQFNNFSGTLPD-FSVWKNLTIINLSDNGFNGTIPRSLSNLTQLEALYLANNSLSGKIPDLNL-PNLQQLNLANNN 195 (625)
Q Consensus 118 ~~L~L~~N~l~~~~p~-~~~l~~L~~L~ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~l-~~L~~L~l~~N~ 195 (625)
++|+|++|++++..+. |..+++|++|+|++|+|++..|..+..+++|++|+|++|.+++..+...+ ..++...+..+.
T Consensus 81 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~~l~~~~~~~~~ 160 (192)
T 1w8a_A 81 QELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGA 160 (192)
T ss_dssp CEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCSGGG
T ss_pred CEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHHHHHHHcCCCCCC
Confidence 9999999999988774 88999999999999999999899999999999999999999876553211 112222334444
Q ss_pred CccccccccccCCCCcccCCCCCCCC
Q 006922 196 LSGSIPQSLKRFPSSAFVGNSISFDE 221 (625)
Q Consensus 196 l~g~~p~~l~~~~~~~~~~n~~~~~~ 221 (625)
.....|..+...+-..+..+.+.|..
T Consensus 161 ~~C~~P~~l~~~~l~~l~~~~~~C~~ 186 (192)
T 1w8a_A 161 ARCGAPSKVRDVQIKDLPHSEFKCSS 186 (192)
T ss_dssp CBBCSSTTTTTSBGGGSCTTTCCCCC
T ss_pred CCCCCChHHcCCChhhCcHhhcCcCC
Confidence 44455665555544444455555543
No 285
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.66 E-value=2e-16 Score=170.58 Aligned_cols=124 Identities=22% Similarity=0.248 Sum_probs=99.0
Q ss_pred CCCCCCCC-CCCceEeCCCC---------CeEEEEEcCCCCcccccCcccccCCCCccEEEecCCCCCccCCcccccccc
Q 006922 47 NESTSVCN-HWTGVKCSEDG---------KRVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPSDFINLKS 116 (625)
Q Consensus 47 ~~~~~~c~-~w~gv~C~~~~---------~~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~ 116 (625)
++..|.|. .|..|.|++.+ ..++.|+|++|++++..+ ..|.++++|+.|+|++|.|++..|..|.++++
T Consensus 46 Cp~~C~C~~~~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~-~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~ 124 (452)
T 3zyi_A 46 CPSVCSCSNQFSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQA-DTFRHLHHLEVLQLGRNSIRQIEVGAFNGLAS 124 (452)
T ss_dssp CCTTSEECSSSCEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECT-TTTTTCTTCCEEECCSSCCCEECTTTTTTCTT
T ss_pred CCCCCEECCCCcEEEECCCCcCccCCCCCCCccEEECcCCcCceECH-HHcCCCCCCCEEECCCCccCCcChhhccCccc
Confidence 45566664 46889998643 358889999999997554 46999999999999999999988899999999
Q ss_pred cccccccccccCCCCCC-cccccccceecCCCccCCCCCCCCccccccccceeccc
Q 006922 117 LCYLYLQFNNFSGTLPD-FSVWKNLTIINLSDNGFNGTIPRSLSNLTQLEALYLAN 171 (625)
Q Consensus 117 L~~L~L~~N~l~~~~p~-~~~l~~L~~L~ls~N~l~~~~p~~l~~l~~L~~L~l~~ 171 (625)
|++|+|++|++++..+. |..+++|++|+|++|+|+...+..|..+++|+.|+|++
T Consensus 125 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 180 (452)
T 3zyi_A 125 LNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGE 180 (452)
T ss_dssp CCEEECCSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCC
T ss_pred CCEEECCCCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCC
Confidence 99999999999976664 88899999999999999865554555555555555554
No 286
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.66 E-value=7.9e-17 Score=180.95 Aligned_cols=153 Identities=19% Similarity=0.229 Sum_probs=132.9
Q ss_pred CceEeCCCC---------CeEEEEEcCCCCcccccCcccccCCCCccEEEecCCCCCccCCccccccccccccccccccc
Q 006922 57 TGVKCSEDG---------KRVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNF 127 (625)
Q Consensus 57 ~gv~C~~~~---------~~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 127 (625)
..|.|+..+ ..++.|+|++|.+++ +++..|.++++|++|+|++|+|++..|..|.++++|++|+|++|+|
T Consensus 34 ~~~~c~~~~l~~vP~~lp~~~~~LdLs~N~i~~-l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l 112 (635)
T 4g8a_A 34 ITYQCMELNFYKIPDNLPFSTKNLDLSFNPLRH-LGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPI 112 (635)
T ss_dssp TEEECTTSCCSSCCSSSCTTCCEEECTTSCCCE-ECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred CEEECCCCCcCccCCCCCcCCCEEEeeCCCCCC-CCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcC
Confidence 457897643 358899999999985 6666799999999999999999998888899999999999999999
Q ss_pred CCCCC-CcccccccceecCCCccCCCCCCCCccccccccceeccccccccc-CCCC--CCCCCcEEEcccCCCccccccc
Q 006922 128 SGTLP-DFSVWKNLTIINLSDNGFNGTIPRSLSNLTQLEALYLANNSLSGK-IPDL--NLPNLQQLNLANNNLSGSIPQS 203 (625)
Q Consensus 128 ~~~~p-~~~~l~~L~~L~ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~-~p~~--~l~~L~~L~l~~N~l~g~~p~~ 203 (625)
++..+ .|..+++|++|+|++|+|++..+..|+++++|++|+|++|++++. +|.. .+++|+.|+|++|+|++..|..
T Consensus 113 ~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 192 (635)
T 4g8a_A 113 QSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTD 192 (635)
T ss_dssp CEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGG
T ss_pred CCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCcccccccccc
Confidence 97666 589999999999999999977777899999999999999999864 4543 6899999999999999888887
Q ss_pred cccCCCC
Q 006922 204 LKRFPSS 210 (625)
Q Consensus 204 l~~~~~~ 210 (625)
+..+..+
T Consensus 193 l~~L~~l 199 (635)
T 4g8a_A 193 LRVLHQM 199 (635)
T ss_dssp GHHHHTC
T ss_pred ccchhhh
Confidence 7765543
No 287
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.65 E-value=2.3e-16 Score=176.67 Aligned_cols=165 Identities=20% Similarity=0.192 Sum_probs=140.3
Q ss_pred CCCCCCCCC-CCCceEeCCCC---------CeEEEEEcCCCCcccccCcccccCCCCccEEEecCCCCCccCCccccccc
Q 006922 46 WNESTSVCN-HWTGVKCSEDG---------KRVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPSDFINLK 115 (625)
Q Consensus 46 w~~~~~~c~-~w~gv~C~~~~---------~~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~ 115 (625)
|++..|.|. .+..|.|++.+ ..++.|+|++|.+++.. +..|+++++|++|+|++|.+++..|..|.+++
T Consensus 3 ~~~~~C~~~~~~~~~~c~~~~l~~iP~~l~~~l~~L~Ls~n~i~~~~-~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~ 81 (606)
T 3t6q_A 3 SSDQKCIEKEVNKTYNCENLGLNEIPGTLPNSTECLEFSFNVLPTIQ-NTTFSRLINLTFLDLTRCQIYWIHEDTFQSQH 81 (606)
T ss_dssp ---CCCEEEETTTEEECTTSCCSSCCTTSCTTCCEEECTTCCCSEEC-TTTSTTCTTCSEEECTTCCCCEECTTTTTTCT
T ss_pred cccCceecccCCceEECCCCCcccCcCCCCCcCcEEEccCCccCcCC-hhHhccCccceEEECCCCccceeChhhccCcc
Confidence 555566663 36678997642 36889999999999755 45699999999999999999999999999999
Q ss_pred ccccccccccccCCCCC-CcccccccceecCCCccCCCCCCCCccccccccceeccccccccc-CCCC-CCCCCcEEEcc
Q 006922 116 SLCYLYLQFNNFSGTLP-DFSVWKNLTIINLSDNGFNGTIPRSLSNLTQLEALYLANNSLSGK-IPDL-NLPNLQQLNLA 192 (625)
Q Consensus 116 ~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~-~p~~-~l~~L~~L~l~ 192 (625)
+|++|+|++|++++..| .|+.+++|++|+|++|++++..|..+.++++|++|+|++|++++. +|.. .+++|+.|+++
T Consensus 82 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 161 (606)
T 3t6q_A 82 RLDTLVLTANPLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQ 161 (606)
T ss_dssp TCCEEECTTCCCSEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECC
T ss_pred ccCeeeCCCCcccccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcc
Confidence 99999999999998777 799999999999999999987788899999999999999999984 3543 78999999999
Q ss_pred cCCCccccccccccCCCCc
Q 006922 193 NNNLSGSIPQSLKRFPSSA 211 (625)
Q Consensus 193 ~N~l~g~~p~~l~~~~~~~ 211 (625)
+|++++..|..++.++.+.
T Consensus 162 ~n~l~~~~~~~~~~l~~L~ 180 (606)
T 3t6q_A 162 NNAIHYLSKEDMSSLQQAT 180 (606)
T ss_dssp SSCCCEECHHHHHTTTTCC
T ss_pred cCcccccChhhhhhhcccc
Confidence 9999988888777776543
No 288
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.65 E-value=1.7e-16 Score=161.91 Aligned_cols=141 Identities=23% Similarity=0.307 Sum_probs=90.5
Q ss_pred eEEEEEcCCCCcccccCcccccCCCCccEEEecCCCCCccCC-cccccccccccccccccccCCCCC-Ccccccccceec
Q 006922 67 RVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFP-SDFINLKSLCYLYLQFNNFSGTLP-DFSVWKNLTIIN 144 (625)
Q Consensus 67 ~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~ 144 (625)
.++.|+|++|.+.+ +|+. +..+++|++|+|++|.+++..+ ..+.++++|++|+|++|.+++..+ .+..+++|++|+
T Consensus 79 ~L~~L~Ls~n~i~~-l~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 156 (306)
T 2z66_A 79 SLKYLDLSFNGVIT-MSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLK 156 (306)
T ss_dssp CCCEEECCSCSEEE-EEEE-EETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEE
T ss_pred ccCEEECCCCcccc-Chhh-cCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEE
Confidence 46667777777763 4433 6677777777777777766443 456667777777777777766555 356666777777
Q ss_pred CCCccCCC-CCCCCccccccccceecccccccccCCCC--CCCCCcEEEcccCCCccccccccccCCC
Q 006922 145 LSDNGFNG-TIPRSLSNLTQLEALYLANNSLSGKIPDL--NLPNLQQLNLANNNLSGSIPQSLKRFPS 209 (625)
Q Consensus 145 ls~N~l~~-~~p~~l~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~L~l~~N~l~g~~p~~l~~~~~ 209 (625)
|++|.+++ .+|..+..+++|++|+|++|++++..|.. .+++|+.|+|++|++++..+..+..++.
T Consensus 157 l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 224 (306)
T 2z66_A 157 MAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNS 224 (306)
T ss_dssp CTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTT
T ss_pred CCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCccc
Confidence 77777665 45666666777777777777776655542 5666777777777776544444444433
No 289
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.65 E-value=2.4e-16 Score=176.20 Aligned_cols=149 Identities=20% Similarity=0.226 Sum_probs=126.0
Q ss_pred EEEEEcCCCCcccccCcccccCCCCccEEEecCCCCCccCCcccccccccccccccccccCCCCC-CcccccccceecCC
Q 006922 68 VVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSGTLP-DFSVWKNLTIINLS 146 (625)
Q Consensus 68 v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~ls 146 (625)
+..+++.++.+. .+|+..+..+++|++|+|++|.|++..|..|.++++|++|+|++|.+++.+| .|+.+++|++|+|+
T Consensus 53 l~~l~l~~~~l~-~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 131 (597)
T 3oja_B 53 QKIVTFKNSTMR-KLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLE 131 (597)
T ss_dssp CSEEEESSCEES-EECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred ceEEEeeCCCCC-CcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEee
Confidence 455677777765 5777778999999999999999999888899999999999999999998877 47999999999999
Q ss_pred CccCCCCCCCCccccccccceecccccccccCCCC--CCCCCcEEEcccCCCccccccccccCCCCcccCCCC
Q 006922 147 DNGFNGTIPRSLSNLTQLEALYLANNSLSGKIPDL--NLPNLQQLNLANNNLSGSIPQSLKRFPSSAFVGNSI 217 (625)
Q Consensus 147 ~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~L~l~~N~l~g~~p~~l~~~~~~~~~~n~~ 217 (625)
+|.|++..+..|+++++|++|+|++|.+++.+|.. .+++|+.|+|++|.+++..+..+..+..+.+.+|.+
T Consensus 132 ~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~L~l~~n~l 204 (597)
T 3oja_B 132 RNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLL 204 (597)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCCGGGCTTCSEEECCSSCC
T ss_pred CCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcChhhhhhhhhhhcccCcc
Confidence 99999655556799999999999999999988863 789999999999999976555566665566666544
No 290
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.64 E-value=5.7e-16 Score=153.32 Aligned_cols=133 Identities=23% Similarity=0.275 Sum_probs=120.0
Q ss_pred CeEEEEEcCCCCcccccCcccccCCCCccEEEecCCCCCccCCcccccccccccccccccccCCCCCC-cccccccceec
Q 006922 66 KRVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSGTLPD-FSVWKNLTIIN 144 (625)
Q Consensus 66 ~~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~ 144 (625)
..++.|+|++|.+.+. ++..|..+++|++|+|++|.|++..+..|..+++|++|+|++|++++..+. |..+++|+.|+
T Consensus 59 ~~L~~L~L~~n~l~~~-~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 137 (251)
T 3m19_A 59 TKLTWLNLDYNQLQTL-SAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELR 137 (251)
T ss_dssp TTCCEEECTTSCCCCC-CTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred ccCCEEECCCCcCCcc-CHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEE
Confidence 4688999999999975 455699999999999999999998888899999999999999999977764 78999999999
Q ss_pred CCCccCCCCCCCCccccccccceecccccccccCCCC--CCCCCcEEEcccCCCccc
Q 006922 145 LSDNGFNGTIPRSLSNLTQLEALYLANNSLSGKIPDL--NLPNLQQLNLANNNLSGS 199 (625)
Q Consensus 145 ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~L~l~~N~l~g~ 199 (625)
|++|+|++..+..|..+++|++|+|++|++++..+.. .+++|+.|+|++|++++.
T Consensus 138 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 138 LNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred CcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 9999999777778999999999999999999877753 789999999999999876
No 291
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.64 E-value=1.5e-16 Score=156.19 Aligned_cols=167 Identities=16% Similarity=0.250 Sum_probs=131.8
Q ss_pred CCCCCCCCCCCCCce--EeCC------CCCeEEEEEcCCCCcccccCcccccCCCCccEEEecCCC-CCccCCccccccc
Q 006922 45 NWNESTSVCNHWTGV--KCSE------DGKRVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNV-ITGYFPSDFINLK 115 (625)
Q Consensus 45 ~w~~~~~~c~~w~gv--~C~~------~~~~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~-l~~~~p~~~~~l~ 115 (625)
.|++..|.|..|.++ .|.+ -...++.|+|++|++++ +++..|.++++|++|+|++|. +++..+..|.+++
T Consensus 2 ~~cp~~C~C~~~~~~~v~c~~l~~ip~~~~~l~~L~l~~n~l~~-i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~ 80 (239)
T 2xwt_C 2 GCSSPPCECHQEEDFRVTCKDIQRIPSLPPSTQTLKLIETHLRT-IPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLS 80 (239)
T ss_dssp -CCSSSCSEEECSTTEEEECSCSSCCCCCTTCCEEEEESCCCSE-ECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCT
T ss_pred CCCCCCCeeCCCCcceeEccCccccCCCCCcccEEEEeCCcceE-ECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCc
Confidence 367777888655664 4964 12358889999999985 555569999999999999997 8887777899999
Q ss_pred ccccccccc-cccCCCCC-CcccccccceecCCCccCCCCCCCCcccccccc---ceecccc-cccccCCCC--CCCCCc
Q 006922 116 SLCYLYLQF-NNFSGTLP-DFSVWKNLTIINLSDNGFNGTIPRSLSNLTQLE---ALYLANN-SLSGKIPDL--NLPNLQ 187 (625)
Q Consensus 116 ~L~~L~L~~-N~l~~~~p-~~~~l~~L~~L~ls~N~l~~~~p~~l~~l~~L~---~L~l~~N-~l~~~~p~~--~l~~L~ 187 (625)
+|++|+|++ |++++..+ .|..+++|++|++++|++++ +|. +..+++|+ .|++++| ++++..+.. .+++|+
T Consensus 81 ~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~ 158 (239)
T 2xwt_C 81 KVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNET 158 (239)
T ss_dssp TCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSE
T ss_pred CCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcce
Confidence 999999998 99987665 58889999999999999986 676 88888888 9999999 898776652 688999
Q ss_pred -EEEcccCCCcccccccccc---CCCCcccCC
Q 006922 188 -QLNLANNNLSGSIPQSLKR---FPSSAFVGN 215 (625)
Q Consensus 188 -~L~l~~N~l~g~~p~~l~~---~~~~~~~~n 215 (625)
.|++++|+++ .+|..... +..+.+.+|
T Consensus 159 ~~L~l~~n~l~-~i~~~~~~~~~L~~L~L~~n 189 (239)
T 2xwt_C 159 LTLKLYNNGFT-SVQGYAFNGTKLDAVYLNKN 189 (239)
T ss_dssp EEEECCSCCCC-EECTTTTTTCEEEEEECTTC
T ss_pred eEEEcCCCCCc-ccCHhhcCCCCCCEEEcCCC
Confidence 9999999998 66654322 233445555
No 292
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.64 E-value=3.3e-16 Score=182.10 Aligned_cols=137 Identities=24% Similarity=0.233 Sum_probs=120.1
Q ss_pred ccCCCCccEEEecCCCCCccCCc-ccccccccccccccccccCCCC-----C-CcccccccceecCCCccCCCCCCCCcc
Q 006922 87 ISRLSALKILSLRSNVITGYFPS-DFINLKSLCYLYLQFNNFSGTL-----P-DFSVWKNLTIINLSDNGFNGTIPRSLS 159 (625)
Q Consensus 87 ~~~l~~L~~L~l~~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~-----p-~~~~l~~L~~L~ls~N~l~~~~p~~l~ 159 (625)
+.++++|+.|+|++|.+++..+. .+..+++|+.|+|++|.+++.. + .|..+++|+.|+|++|+|++..|..|.
T Consensus 422 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 501 (844)
T 3j0a_A 422 LLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFS 501 (844)
T ss_dssp HTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSS
T ss_pred hhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHcc
Confidence 56899999999999999975443 4567899999999999997432 3 478899999999999999998888999
Q ss_pred ccccccceecccccccccCCCCCCCCCcEEEcccCCCccccccccccCCCCcccCCCCCCCCCC
Q 006922 160 NLTQLEALYLANNSLSGKIPDLNLPNLQQLNLANNNLSGSIPQSLKRFPSSAFVGNSISFDENL 223 (625)
Q Consensus 160 ~l~~L~~L~l~~N~l~~~~p~~~l~~L~~L~l~~N~l~g~~p~~l~~~~~~~~~~n~~~~~~~~ 223 (625)
.+++|+.|+|++|+|++.++..-.++|+.|+|++|+|++.+|..+.++..+.+.+|++.|++++
T Consensus 502 ~l~~L~~L~Ls~N~l~~l~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~L~~l~l~~Np~~C~c~~ 565 (844)
T 3j0a_A 502 HLTALRGLSLNSNRLTVLSHNDLPANLEILDISRNQLLAPNPDVFVSLSVLDITHNKFICECEL 565 (844)
T ss_dssp SCCSCSEEEEESCCCSSCCCCCCCSCCCEEEEEEECCCCCCSCCCSSCCEEEEEEECCCCSSSC
T ss_pred chhhhheeECCCCCCCccChhhhhccccEEECCCCcCCCCChhHhCCcCEEEecCCCccccccc
Confidence 9999999999999999877765448999999999999999999999999999999999997754
No 293
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.64 E-value=2.1e-15 Score=144.69 Aligned_cols=156 Identities=26% Similarity=0.294 Sum_probs=126.9
Q ss_pred CceEeCCCCCeEEEEEcCCCCcccccCcccccCCCCccEEEecCCCCCccCCcccccccccccccccccccCCCCCC-cc
Q 006922 57 TGVKCSEDGKRVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSGTLPD-FS 135 (625)
Q Consensus 57 ~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~ 135 (625)
.+..|.. ..++..+++++. +|.. -.++|++|+|++|.+++..+..|.++++|++|+|++|++++..+. |.
T Consensus 3 ~~C~C~~-----~~v~c~~~~l~~-~p~~---~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 73 (208)
T 2o6s_A 3 SRCSCSG-----TTVECYSQGRTS-VPTG---IPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFN 73 (208)
T ss_dssp TTCEEET-----TEEECCSSCCSS-CCSC---CCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTT
T ss_pred CCCEECC-----CEEEecCCCccC-CCCC---CCCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcC
Confidence 3566754 246777888763 4533 356899999999999987777789999999999999999976664 78
Q ss_pred cccccceecCCCccCCCCCCCCccccccccceecccccccccCCCC--CCCCCcEEEcccCCCccccccccccCCC---C
Q 006922 136 VWKNLTIINLSDNGFNGTIPRSLSNLTQLEALYLANNSLSGKIPDL--NLPNLQQLNLANNNLSGSIPQSLKRFPS---S 210 (625)
Q Consensus 136 ~l~~L~~L~ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~L~l~~N~l~g~~p~~l~~~~~---~ 210 (625)
.+++|++|+|++|++++..+..+..+++|++|+|++|++++..+.. .+++|+.|+|++|++++..+..+..+++ +
T Consensus 74 ~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L 153 (208)
T 2o6s_A 74 KLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYI 153 (208)
T ss_dssp TCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEE
T ss_pred CCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEE
Confidence 9999999999999999776677899999999999999999877753 7899999999999999766655665554 5
Q ss_pred cccCCCCCCCC
Q 006922 211 AFVGNSISFDE 221 (625)
Q Consensus 211 ~~~~n~~~~~~ 221 (625)
.+.+|++.|..
T Consensus 154 ~l~~N~~~~~~ 164 (208)
T 2o6s_A 154 WLHDNPWDCTC 164 (208)
T ss_dssp ECCSCCBCCCT
T ss_pred EecCCCeecCC
Confidence 66788877654
No 294
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.64 E-value=1.9e-16 Score=180.28 Aligned_cols=179 Identities=22% Similarity=0.294 Sum_probs=116.5
Q ss_pred CChhHHHHHHHHHHhCC---CCCCCCCCCCCCCCCCCCceEeCCCCCeEEEEEcCCC------------------Cccc-
Q 006922 23 EPVEDKEALLDFVNNLP---HSRSLNWNESTSVCNHWTGVKCSEDGKRVVAVRLPGV------------------GFSG- 80 (625)
Q Consensus 23 ~~~~~~~~ll~~~~~~~---~~~~~~w~~~~~~c~~w~gv~C~~~~~~v~~l~l~~~------------------~l~g- 80 (625)
....++++|+++..... .....+|......+..|.++.++. .+++.|+|.++ .+.+
T Consensus 129 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~--~~~~~l~L~~n~~~~~~~~~l~~l~Ls~~~i~~~ 206 (727)
T 4b8c_D 129 LVDCTKQALMEMADTLTDSKTAKKQQPTGDSTPSGTATNSAVST--PLTPKIELFANGKDEANQALLQHKKLSQYSIDED 206 (727)
T ss_dssp ---CCCHHHHHHHHHHHHHHTTC---------------------------------------------------------
T ss_pred ccccchhhhhhhhhhcccccCcccCCCcCCCCccccCCCceecC--CccceEEeeCCCCCcchhhHhhcCccCcccccCc
Confidence 34557889999987652 222236754445555899888876 34555555333 3322
Q ss_pred -------ccCcccccCCCCccEEEecCCCCCccCCcccccccccccccccccccCCCCC-CcccccccceecCCCccCCC
Q 006922 81 -------LIPPNTISRLSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSGTLP-DFSVWKNLTIINLSDNGFNG 152 (625)
Q Consensus 81 -------~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~ls~N~l~~ 152 (625)
.++++.+..++.|+.|+|++|.|. .+|..+.++++|++|+|++|.|+ .+| .|..+++|++|+|++|+|+
T Consensus 207 ~~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~- 283 (727)
T 4b8c_D 207 DDIENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT- 283 (727)
T ss_dssp ---------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-
T ss_pred cccccceecChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-
Confidence 134667899999999999999999 47888889999999999999999 555 7999999999999999999
Q ss_pred CCCCCccccccccceecccccccccCCC-C-CCCCCcEEEcccCCCccccccccccC
Q 006922 153 TIPRSLSNLTQLEALYLANNSLSGKIPD-L-NLPNLQQLNLANNNLSGSIPQSLKRF 207 (625)
Q Consensus 153 ~~p~~l~~l~~L~~L~l~~N~l~~~~p~-~-~l~~L~~L~l~~N~l~g~~p~~l~~~ 207 (625)
.+|..|+.|++|++|+|++|.|+ .+|. + .+++|+.|+|++|+|+|.+|..+..+
T Consensus 284 ~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~ 339 (727)
T 4b8c_D 284 SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEK 339 (727)
T ss_dssp SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHH
T ss_pred ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhc
Confidence 88999999999999999999998 5564 3 78999999999999999999877654
No 295
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.63 E-value=3e-16 Score=165.88 Aligned_cols=150 Identities=20% Similarity=0.233 Sum_probs=123.9
Q ss_pred eEEEEEcCCCCcccccCcccccCCCCccEEEecCCCCCccCCcccccccccccccccccccCCCCCC-cccccccceecC
Q 006922 67 RVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSGTLPD-FSVWKNLTIINL 145 (625)
Q Consensus 67 ~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~l 145 (625)
.+..+++.++.+. .+|+..+..+++|++|+|++|.+++..+..|.++++|++|+|++|.+++..|. +..+++|++|+|
T Consensus 46 ~l~~l~l~~~~l~-~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 124 (390)
T 3o6n_A 46 NQKIVTFKNSTMR-KLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVL 124 (390)
T ss_dssp CCSEEEEESCEES-EECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CceEEEecCCchh-hCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEEC
Confidence 4556777777765 57777789999999999999999998888999999999999999999988774 889999999999
Q ss_pred CCccCCCCCCCCccccccccceecccccccccCCCC--CCCCCcEEEcccCCCccccccccccCCCCcccCCCC
Q 006922 146 SDNGFNGTIPRSLSNLTQLEALYLANNSLSGKIPDL--NLPNLQQLNLANNNLSGSIPQSLKRFPSSAFVGNSI 217 (625)
Q Consensus 146 s~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~L~l~~N~l~g~~p~~l~~~~~~~~~~n~~ 217 (625)
++|+++...+..+..+++|++|+|++|++++..|.. .+++|+.|++++|++++.-...+..+..+.+.+|.+
T Consensus 125 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~L~~L~l~~n~l 198 (390)
T 3o6n_A 125 ERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLL 198 (390)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCCGGGCTTCSEEECCSSCC
T ss_pred CCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCccccccccccceeecccccc
Confidence 999999544445689999999999999999877763 789999999999999865445555555555555543
No 296
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.63 E-value=6.1e-16 Score=166.22 Aligned_cols=155 Identities=25% Similarity=0.323 Sum_probs=113.0
Q ss_pred CeEEEEEcCCCCcccccCcccccCCCCccEEEecCCCCCccCCcc-------------------------cccccccccc
Q 006922 66 KRVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPSD-------------------------FINLKSLCYL 120 (625)
Q Consensus 66 ~~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~-------------------------~~~l~~L~~L 120 (625)
..++.|+|++|.++ .+++..|..+++|++|+|++|.|++..+.. |.++++|++|
T Consensus 112 ~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L 190 (440)
T 3zyj_A 112 ANLNTLELFDNRLT-TIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYL 190 (440)
T ss_dssp SSCCEEECCSSCCS-SCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEE
T ss_pred ccCCEEECCCCcCC-eeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCee
Confidence 35778888888887 455556888888888888888877655444 4445556666
Q ss_pred cccccccCCCCCCcccccccceecCCCccCCCCCCCCccccccccceecccccccccCCCC--CCCCCcEEEcccCCCcc
Q 006922 121 YLQFNNFSGTLPDFSVWKNLTIINLSDNGFNGTIPRSLSNLTQLEALYLANNSLSGKIPDL--NLPNLQQLNLANNNLSG 198 (625)
Q Consensus 121 ~L~~N~l~~~~p~~~~l~~L~~L~ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~L~l~~N~l~g 198 (625)
+|++|+++ .+|.+..+++|+.|+|++|+|++..|..|..+++|+.|+|++|++++..+.. .+++|+.|+|++|+|++
T Consensus 191 ~L~~n~l~-~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 269 (440)
T 3zyj_A 191 NLAMCNLR-EIPNLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTL 269 (440)
T ss_dssp ECTTSCCS-SCCCCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCC
T ss_pred cCCCCcCc-cccccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCc
Confidence 66666665 4556677777888888888888777778888888888888888888776653 67888888888888886
Q ss_pred ccccccccCC---CCcccCCCCCCCCC
Q 006922 199 SIPQSLKRFP---SSAFVGNSISFDEN 222 (625)
Q Consensus 199 ~~p~~l~~~~---~~~~~~n~~~~~~~ 222 (625)
..+..+..++ .+.+.+|++.|++.
T Consensus 270 ~~~~~~~~l~~L~~L~L~~Np~~CdC~ 296 (440)
T 3zyj_A 270 LPHDLFTPLHHLERIHLHHNPWNCNCD 296 (440)
T ss_dssp CCTTTTSSCTTCCEEECCSSCEECSST
T ss_pred cChhHhccccCCCEEEcCCCCccCCCC
Confidence 6555555544 45677888888775
No 297
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.63 E-value=5.1e-16 Score=155.88 Aligned_cols=150 Identities=20% Similarity=0.240 Sum_probs=127.4
Q ss_pred ceEeCCCC---------CeEEEEEcCCCCcccccCcccccCCCCccEEEecCCCCCccCCcccccccccccccccccccC
Q 006922 58 GVKCSEDG---------KRVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFS 128 (625)
Q Consensus 58 gv~C~~~~---------~~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 128 (625)
.|.|.+.+ ..++.|+|++|++++. ++..|.++++|++|+|++|.+++..+..|.++++|++|+|++|+++
T Consensus 11 ~~~c~~~~l~~ip~~l~~~l~~L~ls~n~l~~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 89 (276)
T 2z62_A 11 TYQCMELNFYKIPDNLPFSTKNLDLSFNPLRHL-GSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQ 89 (276)
T ss_dssp EEECTTSCCSSCCSSSCTTCCEEECTTCCCCEE-CTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCC
T ss_pred eEEecCCCccccCCCCCCCccEEECCCCccccc-CHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccC
Confidence 46776532 2488999999999865 4446999999999999999999988888999999999999999999
Q ss_pred CCCC-CcccccccceecCCCccCCCCCCCCccccccccceeccccccccc-CCCC--CCCCCcEEEcccCCCcccccccc
Q 006922 129 GTLP-DFSVWKNLTIINLSDNGFNGTIPRSLSNLTQLEALYLANNSLSGK-IPDL--NLPNLQQLNLANNNLSGSIPQSL 204 (625)
Q Consensus 129 ~~~p-~~~~l~~L~~L~ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~-~p~~--~l~~L~~L~l~~N~l~g~~p~~l 204 (625)
+..+ .+..+++|++|++++|++++..+..+..+++|++|+|++|++++. +|.. .+++|+.|+|++|++++..+..+
T Consensus 90 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 169 (276)
T 2z62_A 90 SLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDL 169 (276)
T ss_dssp EECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGG
T ss_pred ccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHh
Confidence 8776 689999999999999999977777899999999999999999873 4653 78999999999999997766666
Q ss_pred ccCC
Q 006922 205 KRFP 208 (625)
Q Consensus 205 ~~~~ 208 (625)
..++
T Consensus 170 ~~l~ 173 (276)
T 2z62_A 170 RVLH 173 (276)
T ss_dssp HHHH
T ss_pred hhhh
Confidence 5544
No 298
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.63 E-value=9.6e-16 Score=153.62 Aligned_cols=135 Identities=27% Similarity=0.343 Sum_probs=121.3
Q ss_pred CeEEEEEcCCCCcccccCcccccCCCCccEEEecCCCCCccCCcccccccccccccccccccCCCCCC-cccccccceec
Q 006922 66 KRVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSGTLPD-FSVWKNLTIIN 144 (625)
Q Consensus 66 ~~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~ 144 (625)
..++.|+|++|.+++ +++..++.+++|++|+|++|.+++..+..|.++++|++|+|++|++++..+. +..+++|+.|+
T Consensus 85 ~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 163 (272)
T 3rfs_A 85 TNLTYLILTGNQLQS-LPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELD 163 (272)
T ss_dssp TTCCEEECTTSCCCC-CCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCEEECCCCccCc-cChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEE
Confidence 468899999999996 4555689999999999999999998888899999999999999999977774 78999999999
Q ss_pred CCCccCCCCCCCCccccccccceecccccccccCCCC--CCCCCcEEEcccCCCccccc
Q 006922 145 LSDNGFNGTIPRSLSNLTQLEALYLANNSLSGKIPDL--NLPNLQQLNLANNNLSGSIP 201 (625)
Q Consensus 145 ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~L~l~~N~l~g~~p 201 (625)
|++|++++..+..+..+++|+.|+|++|++++.++.. .+++|+.|+|++|++++..|
T Consensus 164 l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 222 (272)
T 3rfs_A 164 LSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 222 (272)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred CCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccccCc
Confidence 9999999877777899999999999999999887763 78999999999999987766
No 299
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.62 E-value=5.3e-16 Score=173.68 Aligned_cols=151 Identities=21% Similarity=0.241 Sum_probs=133.0
Q ss_pred CceEeCCCC---------CeEEEEEcCCCCcccccCcccccCCCCccEEEecCCCCCccCCccccccccccccccccccc
Q 006922 57 TGVKCSEDG---------KRVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNF 127 (625)
Q Consensus 57 ~gv~C~~~~---------~~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 127 (625)
..|.|++.+ .+++.|+|++|.+++..+ ..|.++++|++|+|++|.+++..|..|.++++|++|+|++|++
T Consensus 14 ~~~~c~~~~l~~ip~~~~~~l~~L~Ls~n~l~~~~~-~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l 92 (606)
T 3vq2_A 14 ITYQCMDQKLSKVPDDIPSSTKNIDLSFNPLKILKS-YSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPI 92 (606)
T ss_dssp TEEECTTSCCSSCCTTSCTTCCEEECTTSCCCEECT-TTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred CceEccCCCcccCCCCCCCCcCEEECCCCCcCEeCh-hhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcc
Confidence 458887532 468899999999987554 4699999999999999999998899999999999999999999
Q ss_pred CCCCC-CcccccccceecCCCccCCCCCCCCccccccccceecccccccc-cCCCC--CCCCCcEEEcccCCCccccccc
Q 006922 128 SGTLP-DFSVWKNLTIINLSDNGFNGTIPRSLSNLTQLEALYLANNSLSG-KIPDL--NLPNLQQLNLANNNLSGSIPQS 203 (625)
Q Consensus 128 ~~~~p-~~~~l~~L~~L~ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~-~~p~~--~l~~L~~L~l~~N~l~g~~p~~ 203 (625)
++..| .|..+++|++|+|++|++++..+..++++++|++|+|++|++++ .+|.. .+++|+.|+|++|++++..|..
T Consensus 93 ~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~ 172 (606)
T 3vq2_A 93 QSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVND 172 (606)
T ss_dssp CCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTT
T ss_pred cccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhh
Confidence 98877 69999999999999999998777889999999999999999986 55753 8999999999999999888877
Q ss_pred cccCC
Q 006922 204 LKRFP 208 (625)
Q Consensus 204 l~~~~ 208 (625)
++.+.
T Consensus 173 ~~~l~ 177 (606)
T 3vq2_A 173 LQFLR 177 (606)
T ss_dssp THHHH
T ss_pred hhhhh
Confidence 76554
No 300
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.62 E-value=1.8e-15 Score=153.15 Aligned_cols=151 Identities=26% Similarity=0.279 Sum_probs=121.6
Q ss_pred CeEEEEEcCCCCcccccCcccccCCCCccEEEecCCCCCccCCcccccccccccccccccccCCCCC-Ccccccccceec
Q 006922 66 KRVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSGTLP-DFSVWKNLTIIN 144 (625)
Q Consensus 66 ~~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~ 144 (625)
.+++.|+|++|.+++. ++ .+.+++|++|+|++|.|+. +|..+..+++|++|+|++|++++..| .|..+++|+.|+
T Consensus 55 ~~L~~L~L~~n~l~~~-~~--~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~ 130 (290)
T 1p9a_G 55 TRLTQLNLDRAELTKL-QV--DGTLPVLGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELY 130 (290)
T ss_dssp TTCCEEECTTSCCCEE-EC--CSCCTTCCEEECCSSCCSS-CCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEE
T ss_pred CCCCEEECCCCccCcc-cC--CCCCCcCCEEECCCCcCCc-CchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEE
Confidence 4578888999988864 32 3788899999999999985 77788889999999999999987766 588889999999
Q ss_pred CCCccCCCCCCCCccccccccceecccccccccCCCC--CCCCCcEEEcccCCCccccccccccCC---CCcccCCCCCC
Q 006922 145 LSDNGFNGTIPRSLSNLTQLEALYLANNSLSGKIPDL--NLPNLQQLNLANNNLSGSIPQSLKRFP---SSAFVGNSISF 219 (625)
Q Consensus 145 ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~L~l~~N~l~g~~p~~l~~~~---~~~~~~n~~~~ 219 (625)
|++|+|++..+..|..+++|+.|+|++|+|++..+.. .+++|+.|+|++|+|+ .+|..+...+ .+.+.+|++.|
T Consensus 131 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C 209 (290)
T 1p9a_G 131 LKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLC 209 (290)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCC
T ss_pred CCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccC
Confidence 9999998766667788889999999999998665543 6888999999999998 6777665544 35667888888
Q ss_pred CC
Q 006922 220 DE 221 (625)
Q Consensus 220 ~~ 221 (625)
.+
T Consensus 210 ~c 211 (290)
T 1p9a_G 210 NC 211 (290)
T ss_dssp SG
T ss_pred cC
Confidence 65
No 301
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.62 E-value=3.6e-16 Score=175.08 Aligned_cols=154 Identities=21% Similarity=0.207 Sum_probs=93.2
Q ss_pred EEEEEcCCCCcccccCcccccCCCCccEEEecCCCCCccCCcccccccccccccccccccCCC-CC-CcccccccceecC
Q 006922 68 VVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSGT-LP-DFSVWKNLTIINL 145 (625)
Q Consensus 68 v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~p-~~~~l~~L~~L~l 145 (625)
++.|++++|.+.+..+...+..+++|++|++++|.+++..|..+.++++|++|+|++|++++. +| .+..+++|+.|+|
T Consensus 401 L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~L 480 (606)
T 3vq2_A 401 LQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDL 480 (606)
T ss_dssp CCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEEC
T ss_pred CCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEEC
Confidence 444555555555544434456666666666666666666666666666666666666666652 34 4566666666666
Q ss_pred CCccCCCCCCCCccccccccceecccccccccCCCC--CCCCCcEEEcccCCCccccccccccCC----CCcccCCCCCC
Q 006922 146 SDNGFNGTIPRSLSNLTQLEALYLANNSLSGKIPDL--NLPNLQQLNLANNNLSGSIPQSLKRFP----SSAFVGNSISF 219 (625)
Q Consensus 146 s~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~L~l~~N~l~g~~p~~l~~~~----~~~~~~n~~~~ 219 (625)
++|++++..|..+..+++|+.|+|++|++++.+|.. .+++|+.|+|++|+|+ .+|..+..++ .+.+.+|++.|
T Consensus 481 s~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c 559 (606)
T 3vq2_A 481 SKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE-TSKGILQHFPKSLAFFNLTNNSVAC 559 (606)
T ss_dssp TTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC-CEESCGGGSCTTCCEEECCSCCCCC
T ss_pred CCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCc-ccCHhHhhhcccCcEEEccCCCccc
Confidence 666666666666666666666666666666655542 5666666666666666 5555554443 24556666666
Q ss_pred CCC
Q 006922 220 DEN 222 (625)
Q Consensus 220 ~~~ 222 (625)
+++
T Consensus 560 ~c~ 562 (606)
T 3vq2_A 560 ICE 562 (606)
T ss_dssp SST
T ss_pred CCc
Confidence 554
No 302
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.62 E-value=7.8e-16 Score=166.01 Aligned_cols=156 Identities=27% Similarity=0.325 Sum_probs=116.7
Q ss_pred CeEEEEEcCCCCcccccCcccccCCCCccEEEecCCCCCccCCcc-------------------------cccccccccc
Q 006922 66 KRVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPSD-------------------------FINLKSLCYL 120 (625)
Q Consensus 66 ~~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~-------------------------~~~l~~L~~L 120 (625)
..+..|+|++|.+++ +++..|..+++|++|+|++|.|++..+.. |.++++|++|
T Consensus 123 ~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L 201 (452)
T 3zyi_A 123 ASLNTLELFDNWLTV-IPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYL 201 (452)
T ss_dssp TTCCEEECCSSCCSB-CCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEE
T ss_pred ccCCEEECCCCcCCc-cChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEE
Confidence 357788888888884 55566888888888888888887655434 4455666666
Q ss_pred cccccccCCCCCCcccccccceecCCCccCCCCCCCCccccccccceecccccccccCCCC--CCCCCcEEEcccCCCcc
Q 006922 121 YLQFNNFSGTLPDFSVWKNLTIINLSDNGFNGTIPRSLSNLTQLEALYLANNSLSGKIPDL--NLPNLQQLNLANNNLSG 198 (625)
Q Consensus 121 ~L~~N~l~~~~p~~~~l~~L~~L~ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~L~l~~N~l~g 198 (625)
+|++|++++ +|.+..+++|+.|+|++|+|++..|..|..+++|+.|+|++|++++..+.. .+++|+.|+|++|+|++
T Consensus 202 ~L~~n~l~~-~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 280 (452)
T 3zyi_A 202 NLGMCNIKD-MPNLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSS 280 (452)
T ss_dssp ECTTSCCSS-CCCCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSC
T ss_pred ECCCCcccc-cccccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCc
Confidence 666666663 466777778888888888888777888888888888888888888777653 67889999999999986
Q ss_pred ccccccccCC---CCcccCCCCCCCCCC
Q 006922 199 SIPQSLKRFP---SSAFVGNSISFDENL 223 (625)
Q Consensus 199 ~~p~~l~~~~---~~~~~~n~~~~~~~~ 223 (625)
..+..+..++ .+.+.+|++.|++.+
T Consensus 281 ~~~~~~~~l~~L~~L~L~~Np~~CdC~~ 308 (452)
T 3zyi_A 281 LPHDLFTPLRYLVELHLHHNPWNCDCDI 308 (452)
T ss_dssp CCTTSSTTCTTCCEEECCSSCEECSTTT
T ss_pred cChHHhccccCCCEEEccCCCcCCCCCc
Confidence 6655555544 456778988888753
No 303
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.62 E-value=3.9e-16 Score=168.37 Aligned_cols=152 Identities=25% Similarity=0.354 Sum_probs=131.3
Q ss_pred CCceEeCCCC--------CeEEEEEcCCCCcccccCcccccCCCCccEEEecCCCCCccC-Ccccccccccccccccccc
Q 006922 56 WTGVKCSEDG--------KRVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYF-PSDFINLKSLCYLYLQFNN 126 (625)
Q Consensus 56 w~gv~C~~~~--------~~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~~~-p~~~~~l~~L~~L~L~~N~ 126 (625)
+..|.|+..+ .+++.|+|++|.+.+..| ..|+++++|++|+|++|.+.+.+ |..|.++++|++|+|++|+
T Consensus 12 ~~~~~c~~~~l~~lp~l~~~l~~L~Ls~n~i~~~~~-~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~ 90 (455)
T 3v47_A 12 GYNAICINRGLHQVPELPAHVNYVDLSLNSIAELNE-TSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQ 90 (455)
T ss_dssp TTEEECCSSCCSSCCCCCTTCCEEECCSSCCCEECT-TTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCT
T ss_pred ccccCcCCCCcccCCCCCCccCEEEecCCccCcCCh-hHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCc
Confidence 4448898654 468999999999987655 46999999999999999998555 5679999999999999999
Q ss_pred cCCCCC-CcccccccceecCCCccCCCCCCCC--ccccccccceecccccccccCCC--C-CCCCCcEEEcccCCCcccc
Q 006922 127 FSGTLP-DFSVWKNLTIINLSDNGFNGTIPRS--LSNLTQLEALYLANNSLSGKIPD--L-NLPNLQQLNLANNNLSGSI 200 (625)
Q Consensus 127 l~~~~p-~~~~l~~L~~L~ls~N~l~~~~p~~--l~~l~~L~~L~l~~N~l~~~~p~--~-~l~~L~~L~l~~N~l~g~~ 200 (625)
+++..| .|..+++|++|+|++|++++.+|.. +..+++|++|+|++|++++..|. . .+++|+.|+|++|++++..
T Consensus 91 l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 170 (455)
T 3v47_A 91 FLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSIC 170 (455)
T ss_dssp TCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCC
T ss_pred cCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccC
Confidence 998777 6999999999999999999865554 89999999999999999988776 2 7899999999999999988
Q ss_pred ccccccCC
Q 006922 201 PQSLKRFP 208 (625)
Q Consensus 201 p~~l~~~~ 208 (625)
|..+..+.
T Consensus 171 ~~~l~~l~ 178 (455)
T 3v47_A 171 EEDLLNFQ 178 (455)
T ss_dssp TTTSGGGT
T ss_pred hhhhhccc
Confidence 88877653
No 304
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.62 E-value=1.6e-15 Score=143.74 Aligned_cols=124 Identities=28% Similarity=0.332 Sum_probs=105.4
Q ss_pred EEcCCCCcccccCcccccCCCCccEEEecCCCCCccCCcccccccccccccccccccCCCCC-CcccccccceecCCCcc
Q 006922 71 VRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSGTLP-DFSVWKNLTIINLSDNG 149 (625)
Q Consensus 71 l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~ls~N~ 149 (625)
++++++++. .+|.. + .++|++|+|++|.|+. +|..|.++++|+.|+|++|++++..+ .|..+++|+.|+|++|+
T Consensus 15 l~~~~~~l~-~ip~~-~--~~~l~~L~L~~n~i~~-ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 15 VRCSNKGLK-VLPKG-I--PRDVTELYLDGNQFTL-VPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp EECTTSCCS-SCCSC-C--CTTCCEEECCSSCCCS-CCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEcCCCCCC-cCCCC-C--CCCCCEEECCCCcCch-hHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCc
Confidence 334445555 45543 3 3689999999999995 77899999999999999999998776 59999999999999999
Q ss_pred CCCCCCCCccccccccceecccccccccCCCC--CCCCCcEEEcccCCCccc
Q 006922 150 FNGTIPRSLSNLTQLEALYLANNSLSGKIPDL--NLPNLQQLNLANNNLSGS 199 (625)
Q Consensus 150 l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~L~l~~N~l~g~ 199 (625)
|++..|..|..+++|+.|+|++|+|++..+.. .+++|+.|+|++|+++..
T Consensus 90 l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~ 141 (193)
T 2wfh_A 90 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCD 141 (193)
T ss_dssp CCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred cCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecC
Confidence 99888889999999999999999999776653 789999999999999743
No 305
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.61 E-value=9.4e-16 Score=153.95 Aligned_cols=112 Identities=26% Similarity=0.262 Sum_probs=79.4
Q ss_pred eEEEEEcCCCCcccccCcccccCCCCccEEEecCCCCCccCCcccccccccccccccccccCCCCC-CcccccccceecC
Q 006922 67 RVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSGTLP-DFSVWKNLTIINL 145 (625)
Q Consensus 67 ~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l 145 (625)
.++.|+|++|.+.+ +++..|..+++|++|+|++|.+++..|..|.++++|++|++++|++++..+ .+..+++|++|++
T Consensus 53 ~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 131 (276)
T 2z62_A 53 ELQVLDLSRCEIQT-IEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNV 131 (276)
T ss_dssp TCSEEECTTCCCCE-ECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEEC
T ss_pred CCcEEECCCCcCCc-cCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEEC
Confidence 46777777777764 344457777777777777777777666777777777777777777776555 5677777777777
Q ss_pred CCccCCCC-CCCCccccccccceecccccccccCC
Q 006922 146 SDNGFNGT-IPRSLSNLTQLEALYLANNSLSGKIP 179 (625)
Q Consensus 146 s~N~l~~~-~p~~l~~l~~L~~L~l~~N~l~~~~p 179 (625)
++|++++. +|..+..+++|++|+|++|++++..+
T Consensus 132 ~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~ 166 (276)
T 2z62_A 132 AHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYC 166 (276)
T ss_dssp CSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECG
T ss_pred cCCccceecCchhhccCCCCCEEECCCCCCCcCCH
Confidence 77777652 56677777777777777777765443
No 306
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.61 E-value=3.5e-16 Score=162.05 Aligned_cols=134 Identities=11% Similarity=0.099 Sum_probs=95.1
Q ss_pred HhHcccCCceeEEEEEEcCCcEEEEEEeccccCC---------------hHH--------HHHHHHHHHcCCCCceecce
Q 006922 329 AEVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVG---------------KRD--------FEQQMEIVGSIRHENVVELK 385 (625)
Q Consensus 329 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~---------------~~~--------~~~e~~~l~~l~h~niv~l~ 385 (625)
.+.||+|+||.||+|...+|+.||||+++..... ... ..+|...|.++.+.++....
T Consensus 100 ~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~vp~ 179 (397)
T 4gyi_A 100 GSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFPVPE 179 (397)
T ss_dssp EEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCSCCC
T ss_pred cCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCCCCe
Confidence 3579999999999999889999999998642110 111 12345555555433332211
Q ss_pred eEEEecCceEEEEEeccCCChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCC
Q 006922 386 AYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQY 465 (625)
Q Consensus 386 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~ 465 (625)
-+.. ...++||||+++++|..+... .....++.|++.+|.|||..+ ||||||||.|||+++++.
T Consensus 180 p~~~--~~~~LVME~i~G~~L~~l~~~-----------~~~~~l~~qll~~l~~lH~~g---IVHrDLKp~NILl~~dgd 243 (397)
T 4gyi_A 180 PIAQ--SRHTIVMSLVDALPMRQVSSV-----------PDPASLYADLIALILRLAKHG---LIHGDFNEFNILIREEKD 243 (397)
T ss_dssp EEEE--ETTEEEEECCSCEEGGGCCCC-----------SCHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEEEEEEC
T ss_pred eeec--cCceEEEEecCCccHhhhccc-----------HHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHEEEeCCCC
Confidence 1111 234799999999888665431 123567899999999999988 999999999999988773
Q ss_pred ----------eeEeccccccccc
Q 006922 466 ----------GCVSDLGLTTITS 478 (625)
Q Consensus 466 ----------~kl~DfGla~~~~ 478 (625)
+.|+||+-+....
T Consensus 244 ~~d~~~~~~~~~iID~~Q~V~~~ 266 (397)
T 4gyi_A 244 AEDPSSITLTPIIIXFPQMVSMD 266 (397)
T ss_dssp SSCTTSEEEEEEECCCTTCEETT
T ss_pred cccccccccceEEEEeCCcccCC
Confidence 7899999876543
No 307
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.61 E-value=5.6e-16 Score=167.12 Aligned_cols=132 Identities=26% Similarity=0.245 Sum_probs=115.0
Q ss_pred CCccEEEecCCCCCccCCcccccccccccccccccccCCCCC-CcccccccceecCCCccCCCCCCCCccccccccceec
Q 006922 91 SALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSGTLP-DFSVWKNLTIINLSDNGFNGTIPRSLSNLTQLEALYL 169 (625)
Q Consensus 91 ~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~ls~N~l~~~~p~~l~~l~~L~~L~l 169 (625)
++|+.|+|++|.+++..|..|.++++|++|+|++|++++..| .|..+++|+.|+|++|++++..|..+..+++|++|+|
T Consensus 275 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 354 (455)
T 3v47_A 275 SGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDL 354 (455)
T ss_dssp SCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEEC
T ss_pred cCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEEC
Confidence 689999999999999899999999999999999999998777 6889999999999999999888888999999999999
Q ss_pred ccccccccCCCC--CCCCCcEEEcccCCCccccccccccCC---CCcccCCCCCCCCC
Q 006922 170 ANNSLSGKIPDL--NLPNLQQLNLANNNLSGSIPQSLKRFP---SSAFVGNSISFDEN 222 (625)
Q Consensus 170 ~~N~l~~~~p~~--~l~~L~~L~l~~N~l~g~~p~~l~~~~---~~~~~~n~~~~~~~ 222 (625)
++|++++..|.. .+++|+.|+|++|+|++..+..+..++ .+.+.+|++.|..+
T Consensus 355 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 355 SYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred CCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCC
Confidence 999999887763 789999999999999975555555554 46678899888764
No 308
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.61 E-value=1.7e-15 Score=162.79 Aligned_cols=150 Identities=24% Similarity=0.263 Sum_probs=114.5
Q ss_pred CCCCCCCC-CCCceEeCCCC---------CeEEEEEcCCCCcccccCcccccCCCCccEEEecCCCCCccCCcccccccc
Q 006922 47 NESTSVCN-HWTGVKCSEDG---------KRVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPSDFINLKS 116 (625)
Q Consensus 47 ~~~~~~c~-~w~gv~C~~~~---------~~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~ 116 (625)
++..|.|. .|..|.|.+.+ ..++.|+|++|++.+..+ ..|.++++|++|+|++|.|++..+..|.++++
T Consensus 35 Cp~~C~C~~~~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~-~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~ 113 (440)
T 3zyj_A 35 CPSVCSCSNQFSKVICVRKNLREVPDGISTNTRLLNLHENQIQIIKV-NSFKHLRHLEILQLSRNHIRTIEIGAFNGLAN 113 (440)
T ss_dssp CCSSSEECTTSCEEECCSCCCSSCCSCCCTTCSEEECCSCCCCEECT-TTTSSCSSCCEEECCSSCCCEECGGGGTTCSS
T ss_pred CCCCCEeCCCCCEEEeCCCCcCcCCCCCCCCCcEEEccCCcCCeeCH-HHhhCCCCCCEEECCCCcCCccChhhccCCcc
Confidence 34556664 47789998642 346789999999986554 56999999999999999999988889999999
Q ss_pred cccccccccccCCCCC-CcccccccceecCCCccCCCCCCCCccccccccceecccccccccCCC--C-CCCCCcEEEcc
Q 006922 117 LCYLYLQFNNFSGTLP-DFSVWKNLTIINLSDNGFNGTIPRSLSNLTQLEALYLANNSLSGKIPD--L-NLPNLQQLNLA 192 (625)
Q Consensus 117 L~~L~L~~N~l~~~~p-~~~~l~~L~~L~ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~--~-~l~~L~~L~l~ 192 (625)
|++|+|++|++++..+ .|..+++|+.|+|++|+|+...+..|..+++|++|+|++|+..+.++. + .+++|+.|+|+
T Consensus 114 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~ 193 (440)
T 3zyj_A 114 LNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLA 193 (440)
T ss_dssp CCEEECCSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECT
T ss_pred CCEEECCCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCC
Confidence 9999999999997666 588899999999999999866666677777777777777443333332 1 55666666666
Q ss_pred cCCCc
Q 006922 193 NNNLS 197 (625)
Q Consensus 193 ~N~l~ 197 (625)
+|+++
T Consensus 194 ~n~l~ 198 (440)
T 3zyj_A 194 MCNLR 198 (440)
T ss_dssp TSCCS
T ss_pred CCcCc
Confidence 66665
No 309
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.59 E-value=3.5e-15 Score=153.99 Aligned_cols=167 Identities=24% Similarity=0.357 Sum_probs=129.7
Q ss_pred CCCCCCCCCCCCceEeCCCC---------CeEEEEEcCCCCcccccCcccccCCCCccEEEecCCCCCccCCcccccccc
Q 006922 46 WNESTSVCNHWTGVKCSEDG---------KRVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPSDFINLKS 116 (625)
Q Consensus 46 w~~~~~~c~~w~gv~C~~~~---------~~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~ 116 (625)
+++..|.| +|..+.|++.+ ..++.|+|++|++.+. ++..|.++++|++|+|++|.+++..|..|.++++
T Consensus 26 ~cp~~c~c-~l~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~i~~~-~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 103 (332)
T 2ft3_A 26 MCPFGCHC-HLRVVQCSDLGLKAVPKEISPDTTLLDLQNNDISEL-RKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRK 103 (332)
T ss_dssp CCCSSCEE-ETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCEE-CTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTT
T ss_pred CCCCCCcc-cCCEEECCCCCccccCCCCCCCCeEEECCCCcCCcc-CHhHhhCCCCCcEEECCCCccCccCHhHhhCcCC
Confidence 34555556 79999998532 3578899999999864 4556999999999999999999988999999999
Q ss_pred cccccccccccCCCCCCcccccccceecCCCccCCCCCCCCccccccccceecccccccc--cCCCC--CCCCCcEEEcc
Q 006922 117 LCYLYLQFNNFSGTLPDFSVWKNLTIINLSDNGFNGTIPRSLSNLTQLEALYLANNSLSG--KIPDL--NLPNLQQLNLA 192 (625)
Q Consensus 117 L~~L~L~~N~l~~~~p~~~~l~~L~~L~ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~--~~p~~--~l~~L~~L~l~ 192 (625)
|++|+|++|+++...+.+. ++|++|++++|++++..+..+..+++|+.|++++|.++. ..|.. .+ +|+.|+++
T Consensus 104 L~~L~L~~n~l~~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~ 180 (332)
T 2ft3_A 104 LQKLYISKNHLVEIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRIS 180 (332)
T ss_dssp CCEEECCSSCCCSCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCC
T ss_pred CCEEECCCCcCCccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECc
Confidence 9999999999984444443 789999999999986656678899999999999999963 44442 34 78888888
Q ss_pred cCCCcccccccc-ccCCCCcccCCCCC
Q 006922 193 NNNLSGSIPQSL-KRFPSSAFVGNSIS 218 (625)
Q Consensus 193 ~N~l~g~~p~~l-~~~~~~~~~~n~~~ 218 (625)
+|++++ +|..+ ..+..+.+.+|.+.
T Consensus 181 ~n~l~~-l~~~~~~~L~~L~l~~n~i~ 206 (332)
T 2ft3_A 181 EAKLTG-IPKDLPETLNELHLDHNKIQ 206 (332)
T ss_dssp SSBCSS-CCSSSCSSCSCCBCCSSCCC
T ss_pred CCCCCc-cCccccCCCCEEECCCCcCC
Confidence 888874 55433 34555556565543
No 310
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.59 E-value=2.3e-15 Score=170.83 Aligned_cols=165 Identities=25% Similarity=0.290 Sum_probs=138.7
Q ss_pred CCCCCCCceEeCCCC---------CeEEEEEcCCCCcccccCcccccCCCCccEEEecCCCCCccCCccccccccccccc
Q 006922 51 SVCNHWTGVKCSEDG---------KRVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPSDFINLKSLCYLY 121 (625)
Q Consensus 51 ~~c~~w~gv~C~~~~---------~~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 121 (625)
|.| .+..|.|+..+ .+++.|+|++|++.+ +++..|+++++|++|+|++|.+++..|..|.++++|++|+
T Consensus 2 C~~-~~~~~~cs~~~L~~ip~~~~~~l~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 79 (680)
T 1ziw_A 2 CTV-SHEVADCSHLKLTQVPDDLPTNITVLNLTHNQLRR-LPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLN 79 (680)
T ss_dssp --C-BSSEEECCSSCCSSCCSCSCTTCSEEECCSSCCCC-CCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEE
T ss_pred cee-ECCeeECCCCCccccccccCCCCcEEECCCCCCCC-cCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEE
Confidence 344 46678887532 468899999999987 5555699999999999999999999999999999999999
Q ss_pred ccccccCCCCC-CcccccccceecCCCccCCCCCCCCccccccccceecccccccccCCCC--CCCCCcEEEcccCCCcc
Q 006922 122 LQFNNFSGTLP-DFSVWKNLTIINLSDNGFNGTIPRSLSNLTQLEALYLANNSLSGKIPDL--NLPNLQQLNLANNNLSG 198 (625)
Q Consensus 122 L~~N~l~~~~p-~~~~l~~L~~L~ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~L~l~~N~l~g 198 (625)
|++|++++..+ .|..+++|++|+|++|++++..|..|+++++|++|+|++|.+++..|.. .+++|+.|++++|++++
T Consensus 80 L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 159 (680)
T 1ziw_A 80 LQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQA 159 (680)
T ss_dssp CCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCC
T ss_pred CCCCccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccc
Confidence 99999997666 5999999999999999999877789999999999999999999887763 79999999999999998
Q ss_pred ccccccc-----cCCCCcccCCCC
Q 006922 199 SIPQSLK-----RFPSSAFVGNSI 217 (625)
Q Consensus 199 ~~p~~l~-----~~~~~~~~~n~~ 217 (625)
..|..+. .+..+.+.+|.+
T Consensus 160 ~~~~~~~~~~~~~L~~L~L~~n~l 183 (680)
T 1ziw_A 160 LKSEELDIFANSSLKKLELSSNQI 183 (680)
T ss_dssp BCHHHHGGGTTCEESEEECTTCCC
T ss_pred cCHHHhhccccccccEEECCCCcc
Confidence 7776543 344555666654
No 311
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.59 E-value=1.5e-15 Score=155.33 Aligned_cols=134 Identities=20% Similarity=0.193 Sum_probs=64.3
Q ss_pred eEEEEEcCCCCcccccC---cccccCCCCccEEEecCCCCCccCCcccccccccccccccccccCCC---CC--Cccccc
Q 006922 67 RVVAVRLPGVGFSGLIP---PNTISRLSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSGT---LP--DFSVWK 138 (625)
Q Consensus 67 ~v~~l~l~~~~l~g~~~---~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~---~p--~~~~l~ 138 (625)
.++.|+|++|.+++..+ ...+..+++|++|+|++|.+++..|..|.++++|++|+|++|++.+. .+ .+..++
T Consensus 118 ~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~ 197 (310)
T 4glp_A 118 ALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFP 197 (310)
T ss_dssp CCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSC
T ss_pred CCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCC
Confidence 34555555555554333 11233455555555555555555555555555555555555555431 11 123445
Q ss_pred ccceecCCCccCCCCCCC----CccccccccceecccccccccCCCC--CC---CCCcEEEcccCCCcccccc
Q 006922 139 NLTIINLSDNGFNGTIPR----SLSNLTQLEALYLANNSLSGKIPDL--NL---PNLQQLNLANNNLSGSIPQ 202 (625)
Q Consensus 139 ~L~~L~ls~N~l~~~~p~----~l~~l~~L~~L~l~~N~l~~~~p~~--~l---~~L~~L~l~~N~l~g~~p~ 202 (625)
+|++|+|++|+++ .++. .++.+++|++|+|++|++++..|.. .+ ++|+.|+|++|+|+ .+|.
T Consensus 198 ~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~ 268 (310)
T 4glp_A 198 AIQNLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPK 268 (310)
T ss_dssp CCCSCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCS
T ss_pred CCCEEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhh
Confidence 5555555555554 1121 1234455555555555555543321 22 45555555555555 3443
No 312
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.58 E-value=1.1e-15 Score=141.37 Aligned_cols=133 Identities=26% Similarity=0.205 Sum_probs=109.3
Q ss_pred CeEEEEEcCCCCcc-cccCcccccCCCCccEEEecCCCCCccCCcccccccccccccccccccCCCCCC-ccccccccee
Q 006922 66 KRVVAVRLPGVGFS-GLIPPNTISRLSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSGTLPD-FSVWKNLTII 143 (625)
Q Consensus 66 ~~v~~l~l~~~~l~-g~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L 143 (625)
..++.|+|++|+++ +.+|.. +..+++|++|+|++|.+++. ..+..+++|++|+|++|++++.+|. +..+++|++|
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~-~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGL-TAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSC-CGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred ccCCEEECCCCCCChhhHHHH-HHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 35888999999988 777764 88899999999999999875 6788899999999999999887774 4558999999
Q ss_pred cCCCccCCCCC-CCCccccccccceecccccccccCC----C-CCCCCCcEEEcccCCCcccccc
Q 006922 144 NLSDNGFNGTI-PRSLSNLTQLEALYLANNSLSGKIP----D-LNLPNLQQLNLANNNLSGSIPQ 202 (625)
Q Consensus 144 ~ls~N~l~~~~-p~~l~~l~~L~~L~l~~N~l~~~~p----~-~~l~~L~~L~l~~N~l~g~~p~ 202 (625)
+|++|+|++.. +..+..+++|+.|++++|.+++..+ . ..+++|+.|++++|.+. .+|.
T Consensus 101 ~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~-~~~~ 164 (168)
T 2ell_A 101 NLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ-EAPD 164 (168)
T ss_dssp ECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC-BCCS
T ss_pred eccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh-hccc
Confidence 99999998542 2678889999999999999987766 2 27889999999999886 4554
No 313
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.58 E-value=1.2e-15 Score=170.68 Aligned_cols=143 Identities=22% Similarity=0.204 Sum_probs=96.3
Q ss_pred eEEEEEcCCCCcccccCcccccCCCCccEEEecCCCCCccCCcc-cccccccccccccccccCCCCC-Ccccccccceec
Q 006922 67 RVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPSD-FINLKSLCYLYLQFNNFSGTLP-DFSVWKNLTIIN 144 (625)
Q Consensus 67 ~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~-~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~ 144 (625)
.++.|++++|.+.+..|. .+..+++|+.|+|++|.+++..|.. +.++++|+.|+|++|.+++..| .+..+++|+.|+
T Consensus 377 ~L~~L~l~~n~l~~~~~~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 455 (606)
T 3t6q_A 377 HLQSLNLSYNEPLSLKTE-AFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLN 455 (606)
T ss_dssp TCCEEECCSCSCEEECTT-TTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEE
T ss_pred CCCEEECCCCcCCcCCHH-HhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEE
Confidence 566777777777765443 4777777777777777777655443 6777777777777777776655 466677777777
Q ss_pred CCCccCCCC---CCCCccccccccceecccccccccCCCC--CCCCCcEEEcccCCCccccccccccCCCC
Q 006922 145 LSDNGFNGT---IPRSLSNLTQLEALYLANNSLSGKIPDL--NLPNLQQLNLANNNLSGSIPQSLKRFPSS 210 (625)
Q Consensus 145 ls~N~l~~~---~p~~l~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~L~l~~N~l~g~~p~~l~~~~~~ 210 (625)
|++|++++. .+..+..+++|++|+|++|++++.+|.. .+++|+.|+|++|++++..|..+..++.+
T Consensus 456 L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L 526 (606)
T 3t6q_A 456 LQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI 526 (606)
T ss_dssp CTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC
T ss_pred CCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc
Confidence 777777652 2345666777777777777777666543 56677777777777776666666665544
No 314
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.58 E-value=1.3e-15 Score=165.76 Aligned_cols=146 Identities=21% Similarity=0.170 Sum_probs=76.2
Q ss_pred EEEEEcCCCCcccccCcccccCCCCccEEEecCCCCCccCCcccccccccccccccccccCCCCC-Ccc-cccccceecC
Q 006922 68 VVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSGTLP-DFS-VWKNLTIINL 145 (625)
Q Consensus 68 v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~-~l~~L~~L~l 145 (625)
+..|+|++|.+++..+ ..+++|+.|+|++|.|++..|..|+++++|+.|+|++|.+++.+| .+. .+++|+.|+|
T Consensus 101 L~~L~L~~N~l~~~~~----~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~L 176 (487)
T 3oja_A 101 IETLHAANNNISRVSC----SRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNL 176 (487)
T ss_dssp CCEEECCSSCCCCEEE----CCCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEEC
T ss_pred cCEEECcCCcCCCCCc----cccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEec
Confidence 4445555555554322 234555666666666665555555556666666666666655444 332 4555666666
Q ss_pred CCccCCCCCCCCccccccccceecccccccccCCCC-CCCCCcEEEcccCCCccccccccccCCC---CcccCCCCCCC
Q 006922 146 SDNGFNGTIPRSLSNLTQLEALYLANNSLSGKIPDL-NLPNLQQLNLANNNLSGSIPQSLKRFPS---SAFVGNSISFD 220 (625)
Q Consensus 146 s~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~-~l~~L~~L~l~~N~l~g~~p~~l~~~~~---~~~~~n~~~~~ 220 (625)
++|.|++. |. +..+++|+.|+|++|.|++.+|.. .+++|+.|+|++|+|++ +|..+..++. +.+.+|++.|+
T Consensus 177 s~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~ 252 (487)
T 3oja_A 177 QYNFIYDV-KG-QVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCG 252 (487)
T ss_dssp TTSCCCEE-EC-CCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHH
T ss_pred CCCccccc-cc-cccCCCCCEEECCCCCCCCCCHhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCc
Confidence 66665543 21 223555666666666665544443 45556666666666653 4544443332 34445555543
No 315
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.57 E-value=4.6e-15 Score=152.94 Aligned_cols=147 Identities=22% Similarity=0.310 Sum_probs=102.9
Q ss_pred CCCCCCCCCCCceEeCCCC---------CeEEEEEcCCCCcccccCcccccCCCCccEEEecCCCCCccCCccccccccc
Q 006922 47 NESTSVCNHWTGVKCSEDG---------KRVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPSDFINLKSL 117 (625)
Q Consensus 47 ~~~~~~c~~w~gv~C~~~~---------~~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L 117 (625)
++..|.| +|+.+.|++.+ ..++.|+|++|++++. ++..|+++++|++|+|++|.+++..|..|.++++|
T Consensus 25 cp~~c~c-~l~~l~~~~~~l~~lp~~~~~~l~~L~L~~n~i~~~-~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 102 (330)
T 1xku_A 25 CPFRCQC-HLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEI-KDGDFKNLKNLHTLILINNKISKISPGAFAPLVKL 102 (330)
T ss_dssp CCTTCEE-ETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCCB-CTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTC
T ss_pred CCCCCcC-CCeEEEecCCCccccCccCCCCCeEEECCCCcCCEe-ChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCC
Confidence 3445556 79999998532 3577899999999864 45569999999999999999999889999999999
Q ss_pred ccccccccccCCCCCCcccccccceecCCCccCCCCCCCCccccccccceecccccccc--cCCCC--CCCCCcEEEccc
Q 006922 118 CYLYLQFNNFSGTLPDFSVWKNLTIINLSDNGFNGTIPRSLSNLTQLEALYLANNSLSG--KIPDL--NLPNLQQLNLAN 193 (625)
Q Consensus 118 ~~L~L~~N~l~~~~p~~~~l~~L~~L~ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~--~~p~~--~l~~L~~L~l~~ 193 (625)
++|+|++|+++.....+. ++|++|++++|++++..+..+..+++|+.|++++|.++. ..+.. .+++|+.|++++
T Consensus 103 ~~L~Ls~n~l~~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~ 180 (330)
T 1xku_A 103 ERLYLSKNQLKELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIAD 180 (330)
T ss_dssp CEEECCSSCCSBCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCS
T ss_pred CEEECCCCcCCccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCC
Confidence 999999999984332332 566666666666665544455556666666666666542 22321 445555555555
Q ss_pred CCCc
Q 006922 194 NNLS 197 (625)
Q Consensus 194 N~l~ 197 (625)
|+++
T Consensus 181 n~l~ 184 (330)
T 1xku_A 181 TNIT 184 (330)
T ss_dssp SCCC
T ss_pred Cccc
Confidence 5554
No 316
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.57 E-value=4.8e-15 Score=164.42 Aligned_cols=153 Identities=24% Similarity=0.305 Sum_probs=125.2
Q ss_pred CeEEEEEcCCCCcccccCcccccCCCCccEEEecCCCCCcc--CCcccccccccccccccccccCCCCC--Ccccccccc
Q 006922 66 KRVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGY--FPSDFINLKSLCYLYLQFNNFSGTLP--DFSVWKNLT 141 (625)
Q Consensus 66 ~~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~~--~p~~~~~l~~L~~L~L~~N~l~~~~p--~~~~l~~L~ 141 (625)
..++.|+|++|.+++.+|. .++.+++|++|+|++|.+++. +|..+.++++|++|+|++|++++.+| .+..+++|+
T Consensus 353 ~~L~~L~l~~n~l~~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~ 431 (562)
T 3a79_B 353 SSFTFLNFTQNVFTDSVFQ-GCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESIL 431 (562)
T ss_dssp CCCCEEECCSSCCCTTTTT-TCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCC
T ss_pred CCceEEECCCCccccchhh-hhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCC
Confidence 4688899999999987765 489999999999999999973 34678899999999999999998566 378889999
Q ss_pred eecCCCccCCCCCCCCccccccccceecccccccccCCCC-CCCCCcEEEcccCCCccccccc-cccCCC---CcccCCC
Q 006922 142 IINLSDNGFNGTIPRSLSNLTQLEALYLANNSLSGKIPDL-NLPNLQQLNLANNNLSGSIPQS-LKRFPS---SAFVGNS 216 (625)
Q Consensus 142 ~L~ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~-~l~~L~~L~l~~N~l~g~~p~~-l~~~~~---~~~~~n~ 216 (625)
.|+|++|++++.+|..+. ++|+.|+|++|+++...+.. .+++|+.|+|++|+|+ .+|.. +..++. +.+.+|+
T Consensus 432 ~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~ 508 (562)
T 3a79_B 432 VLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIMSIPKDVTHLQALQELNVASNQLK-SVPDGVFDRLTSLQYIWLHDNP 508 (562)
T ss_dssp EEECCSSCCCGGGGSSCC--TTCSEEECCSSCCCCCCTTTTSSCCCSEEECCSSCCC-CCCTTSTTTCTTCCCEECCSCC
T ss_pred EEECCCCCCCcchhhhhc--CcCCEEECCCCcCcccChhhcCCCCCCEEECCCCCCC-CCCHHHHhcCCCCCEEEecCCC
Confidence 999999999888877765 68999999999998543333 7889999999999999 56665 665554 5677888
Q ss_pred CCCCCC
Q 006922 217 ISFDEN 222 (625)
Q Consensus 217 ~~~~~~ 222 (625)
+.|+++
T Consensus 509 ~~c~c~ 514 (562)
T 3a79_B 509 WDCTCP 514 (562)
T ss_dssp BCCCHH
T ss_pred cCCCcc
Confidence 888753
No 317
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.56 E-value=3.6e-15 Score=167.39 Aligned_cols=156 Identities=22% Similarity=0.249 Sum_probs=136.7
Q ss_pred eEEEEEcCCCCcccccCcccccCCCCccEEEecCCCCCccCCcccccccccccccccccccCC-CCC-Ccccccccceec
Q 006922 67 RVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSG-TLP-DFSVWKNLTIIN 144 (625)
Q Consensus 67 ~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p-~~~~l~~L~~L~ 144 (625)
.+..+++..++.....+...+..+.+|+.++++.|.+.+..|..+..+++|+.|+|++|++.. .+| .|..+++|++|+
T Consensus 421 ~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~ 500 (635)
T 4g8a_A 421 QLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLD 500 (635)
T ss_dssp TCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEE
T ss_pred cccchhhhhccccccccccccccccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEE
Confidence 455667777777777777778999999999999999999999999999999999999998644 455 588999999999
Q ss_pred CCCccCCCCCCCCccccccccceecccccccccCCCC--CCCCCcEEEcccCCCccccccccccC----CCCcccCCCCC
Q 006922 145 LSDNGFNGTIPRSLSNLTQLEALYLANNSLSGKIPDL--NLPNLQQLNLANNNLSGSIPQSLKRF----PSSAFVGNSIS 218 (625)
Q Consensus 145 ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~L~l~~N~l~g~~p~~l~~~----~~~~~~~n~~~ 218 (625)
|++|+|++..|..|.++++|++|+|++|+|++..|.. .+++|+.|+|++|+|++..|..+..+ ..+.+.+|++.
T Consensus 501 Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~ 580 (635)
T 4g8a_A 501 LSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFA 580 (635)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBC
T ss_pred CCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCc
Confidence 9999999998999999999999999999999887763 78999999999999999999888765 34678899999
Q ss_pred CCCC
Q 006922 219 FDEN 222 (625)
Q Consensus 219 ~~~~ 222 (625)
|++.
T Consensus 581 C~C~ 584 (635)
T 4g8a_A 581 CTCE 584 (635)
T ss_dssp CSGG
T ss_pred ccCC
Confidence 9874
No 318
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.55 E-value=9.4e-15 Score=165.82 Aligned_cols=152 Identities=24% Similarity=0.291 Sum_probs=119.0
Q ss_pred EEEcCCCCcc--cccCcccccCCCCccEEEecCCCCCccCCcccccccccccccccccccCCCC----C-----Cccccc
Q 006922 70 AVRLPGVGFS--GLIPPNTISRLSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSGTL----P-----DFSVWK 138 (625)
Q Consensus 70 ~l~l~~~~l~--g~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~----p-----~~~~l~ 138 (625)
.|++.+|.+. +.+| ..|..+++|+.|+|++|.|++..|..|.++++|++|+|++|++++.. | .+..++
T Consensus 458 ~L~l~~n~l~~~~~~p-~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~ 536 (680)
T 1ziw_A 458 RLMLRRVALKNVDSSP-SPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLS 536 (680)
T ss_dssp EEECTTSCCBCTTCSS-CTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCT
T ss_pred cchhccccccccccCC-cccccCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCC
Confidence 3344444433 3344 34888889999999999998877777888999999999999887532 1 378889
Q ss_pred ccceecCCCccCCCCCCCCccccccccceecccccccccCCCC--CCCCCcEEEcccCCCccccccc----cccCCCCcc
Q 006922 139 NLTIINLSDNGFNGTIPRSLSNLTQLEALYLANNSLSGKIPDL--NLPNLQQLNLANNNLSGSIPQS----LKRFPSSAF 212 (625)
Q Consensus 139 ~L~~L~ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~L~l~~N~l~g~~p~~----l~~~~~~~~ 212 (625)
+|+.|+|++|+++...+..|..+++|+.|+|++|++++.++.. .+++|+.|+|++|+|++..|.. +.++..+.+
T Consensus 537 ~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l 616 (680)
T 1ziw_A 537 HLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDM 616 (680)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEEC
T ss_pred CCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEc
Confidence 9999999999998443446899999999999999999766653 7899999999999999877764 445667788
Q ss_pred cCCCCCCCCC
Q 006922 213 VGNSISFDEN 222 (625)
Q Consensus 213 ~~n~~~~~~~ 222 (625)
.+|++.|++.
T Consensus 617 ~~N~~~c~c~ 626 (680)
T 1ziw_A 617 RFNPFDCTCE 626 (680)
T ss_dssp TTCCCCBCCC
T ss_pred cCCCcccCCc
Confidence 9999999875
No 319
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.55 E-value=9.1e-16 Score=172.61 Aligned_cols=150 Identities=23% Similarity=0.361 Sum_probs=127.3
Q ss_pred CeEEEEEcCCCCcccc-----------------cCccccc--CCCCccEEEecCCCCCccCCcccccccccccccccccc
Q 006922 66 KRVVAVRLPGVGFSGL-----------------IPPNTIS--RLSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNN 126 (625)
Q Consensus 66 ~~v~~l~l~~~~l~g~-----------------~~~~~~~--~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 126 (625)
..++.|+|++|.++|. +|+. ++ ++++|++|+|++|.+.+.+|..|+++++|++|+|++|+
T Consensus 206 ~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~-l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~ 284 (636)
T 4eco_A 206 TKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTED-LKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNR 284 (636)
T ss_dssp TTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSC-CCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCT
T ss_pred cCCCEEECcCCccccccccccccccccchhcccCchh-hhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCC
Confidence 3578899999999996 8765 88 99999999999999999999999999999999999998
Q ss_pred -cCC-CCC-Ccccc------cccceecCCCccCCCCCCC--CccccccccceecccccccccCCCC-CCCCCcEEEcccC
Q 006922 127 -FSG-TLP-DFSVW------KNLTIINLSDNGFNGTIPR--SLSNLTQLEALYLANNSLSGKIPDL-NLPNLQQLNLANN 194 (625)
Q Consensus 127 -l~~-~~p-~~~~l------~~L~~L~ls~N~l~~~~p~--~l~~l~~L~~L~l~~N~l~~~~p~~-~l~~L~~L~l~~N 194 (625)
++| .+| .++.+ ++|++|+|++|+++ .+|. .++++++|++|+|++|+++|.+|.. .+++|+.|+|++|
T Consensus 285 ~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip~~~~l~~L~~L~L~~N 363 (636)
T 4eco_A 285 GISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLPAFGSEIKLASLNLAYN 363 (636)
T ss_dssp TSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECCCCEEEEEESEEECCSS
T ss_pred CCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchhhhCCCCCCCEEECCCC
Confidence 888 677 46655 89999999999999 8888 8999999999999999999888854 6788999999999
Q ss_pred CCccccccccccCCC-C---cccCCCCC
Q 006922 195 NLSGSIPQSLKRFPS-S---AFVGNSIS 218 (625)
Q Consensus 195 ~l~g~~p~~l~~~~~-~---~~~~n~~~ 218 (625)
+++ .+|..+..++. + .+.+|.+.
T Consensus 364 ~l~-~lp~~l~~l~~~L~~L~Ls~N~l~ 390 (636)
T 4eco_A 364 QIT-EIPANFCGFTEQVENLSFAHNKLK 390 (636)
T ss_dssp EEE-ECCTTSEEECTTCCEEECCSSCCS
T ss_pred ccc-cccHhhhhhcccCcEEEccCCcCc
Confidence 998 88887776655 3 44555543
No 320
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.55 E-value=3.4e-15 Score=142.00 Aligned_cols=142 Identities=18% Similarity=0.328 Sum_probs=114.0
Q ss_pred eEEEEEcCCCCcccccCcccccCCCCccEEEecCCCCCccCCcccccccccccccccccccCCC-CCCcccccccceecC
Q 006922 67 RVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSGT-LPDFSVWKNLTIINL 145 (625)
Q Consensus 67 ~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~~~l~~L~~L~l 145 (625)
+++.|+++++++. .+| .+..+++|++|++++|.++. +..+..+++|++|+|++|++++. ++.+..+++|++|+|
T Consensus 45 ~L~~L~l~~n~i~-~l~--~l~~l~~L~~L~l~~n~~~~--~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L 119 (197)
T 4ezg_A 45 SLTYITLANINVT-DLT--GIEYAHNIKDLTINNIHATN--YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDI 119 (197)
T ss_dssp TCCEEEEESSCCS-CCT--TGGGCTTCSEEEEESCCCSC--CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEEC
T ss_pred CccEEeccCCCcc-ChH--HHhcCCCCCEEEccCCCCCc--chhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEe
Confidence 4778899999888 555 38899999999999997764 34788999999999999999874 447889999999999
Q ss_pred CCccCCCCCCCCccccccccceeccccc-ccccCCCC-CCCCCcEEEcccCCCccccccccccCCC---CcccCCC
Q 006922 146 SDNGFNGTIPRSLSNLTQLEALYLANNS-LSGKIPDL-NLPNLQQLNLANNNLSGSIPQSLKRFPS---SAFVGNS 216 (625)
Q Consensus 146 s~N~l~~~~p~~l~~l~~L~~L~l~~N~-l~~~~p~~-~l~~L~~L~l~~N~l~g~~p~~l~~~~~---~~~~~n~ 216 (625)
++|++++..|..+..+++|++|+|++|+ ++ .+|.. .+++|+.|++++|++++ ++ .+..++. +.+.+|.
T Consensus 120 s~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~N~ 192 (197)
T 4ezg_A 120 SHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIMPLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAFSQT 192 (197)
T ss_dssp CSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCGGGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEECBC-
T ss_pred cCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccHhhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEeeCcc
Confidence 9999998778888999999999999998 55 44543 78899999999999985 44 4555554 4445555
No 321
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.55 E-value=1.2e-15 Score=156.14 Aligned_cols=87 Identities=17% Similarity=0.162 Sum_probs=39.3
Q ss_pred CCCCccEEEecCCCCCccCCccc--ccccccccccccccccCCCCCCcccc-----cccceecCCCccCCCCCCCCcccc
Q 006922 89 RLSALKILSLRSNVITGYFPSDF--INLKSLCYLYLQFNNFSGTLPDFSVW-----KNLTIINLSDNGFNGTIPRSLSNL 161 (625)
Q Consensus 89 ~l~~L~~L~l~~N~l~~~~p~~~--~~l~~L~~L~L~~N~l~~~~p~~~~l-----~~L~~L~ls~N~l~~~~p~~l~~l 161 (625)
++++|++|+|++|.+++.+|..+ ..+++|++|+|++|++++.++.+..+ ++|++|+|++|++++..|..++.+
T Consensus 93 ~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l 172 (312)
T 1wwl_A 93 GISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATRDAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVF 172 (312)
T ss_dssp TTSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSSSSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCC
T ss_pred CcCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcchhHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccC
Confidence 34444444444444444444443 44444444444444444442123333 444444444444444444444444
Q ss_pred ccccceeccccccc
Q 006922 162 TQLEALYLANNSLS 175 (625)
Q Consensus 162 ~~L~~L~l~~N~l~ 175 (625)
++|++|+|++|++.
T Consensus 173 ~~L~~L~Ls~N~l~ 186 (312)
T 1wwl_A 173 PALSTLDLSDNPEL 186 (312)
T ss_dssp SSCCEEECCSCTTC
T ss_pred CCCCEEECCCCCcC
Confidence 44444444444443
No 322
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.54 E-value=5.8e-15 Score=162.04 Aligned_cols=151 Identities=26% Similarity=0.309 Sum_probs=105.5
Q ss_pred CeEEEEEcCCCCcccccCcccccCCCCccEEEecCCCCCc--cCCcccccccccccccccccccCCCCC--Ccccccccc
Q 006922 66 KRVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITG--YFPSDFINLKSLCYLYLQFNNFSGTLP--DFSVWKNLT 141 (625)
Q Consensus 66 ~~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~p--~~~~l~~L~ 141 (625)
..++.|+|++|.+++.+|. .++.+++|++|+|++|.+++ .+|..+.++++|++|+|++|++++.+| .+..+++|+
T Consensus 324 ~~L~~L~Ls~n~l~~~~~~-~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~ 402 (520)
T 2z7x_B 324 SPFLHLDFSNNLLTDTVFE-NCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLL 402 (520)
T ss_dssp CCCCEEECCSSCCCTTTTT-TCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCC
T ss_pred CcccEEEeECCccChhhhh-hhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCC
Confidence 3567777777777776665 37777788888888887775 445667777788888888888776555 366777788
Q ss_pred eecCCCccCCCCCCCCccccccccceecccccccccCCC-C-CCCCCcEEEcccCCCccccccc-cccCCC---CcccCC
Q 006922 142 IINLSDNGFNGTIPRSLSNLTQLEALYLANNSLSGKIPD-L-NLPNLQQLNLANNNLSGSIPQS-LKRFPS---SAFVGN 215 (625)
Q Consensus 142 ~L~ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~-~-~l~~L~~L~l~~N~l~g~~p~~-l~~~~~---~~~~~n 215 (625)
.|+|++|++++.+|..+. ++|+.|+|++|+++ .+|. . .+++|+.|+|++|+|+ .+|.. +..++. +.+.+|
T Consensus 403 ~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N 478 (520)
T 2z7x_B 403 SLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLK-SVPDGIFDRLTSLQKIWLHTN 478 (520)
T ss_dssp EEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSS
T ss_pred EEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCC-ccCHHHhccCCcccEEECcCC
Confidence 888888877776666554 57778888888777 4443 2 6777888888888887 45554 544443 456677
Q ss_pred CCCCCC
Q 006922 216 SISFDE 221 (625)
Q Consensus 216 ~~~~~~ 221 (625)
++.|.+
T Consensus 479 ~~~c~c 484 (520)
T 2z7x_B 479 PWDCSC 484 (520)
T ss_dssp CBCCCH
T ss_pred CCcccC
Confidence 777654
No 323
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.54 E-value=1.4e-14 Score=168.37 Aligned_cols=161 Identities=19% Similarity=0.177 Sum_probs=130.8
Q ss_pred CCCceEeCCCCCeEEEEEcCCCCcccccCcccccCCCCccEEEecCCCCCccC-CcccccccccccccccccccCCCCC-
Q 006922 55 HWTGVKCSEDGKRVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYF-PSDFINLKSLCYLYLQFNNFSGTLP- 132 (625)
Q Consensus 55 ~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p- 132 (625)
+|..|-+ -..+++.|+|++|.+++..+. .|.++++|++|+|++|.+.+.+ |..|.++++|++|+|++|.+++..|
T Consensus 15 ~L~~vP~--lp~~l~~LdLs~N~i~~i~~~-~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~ 91 (844)
T 3j0a_A 15 NLTQVPQ--VLNTTERLLLSFNYIRTVTAS-SFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPD 91 (844)
T ss_dssp CSSCCCS--SCTTCCEEEEESCCCCEECSS-SCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTT
T ss_pred CCCCCCC--CCCCcCEEECCCCcCCccChh-HCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHh
Confidence 4666666 225688999999999876554 5999999999999999666555 7789999999999999999998777
Q ss_pred CcccccccceecCCCccCCCCCCCC--ccccccccceecccccccccCCC--C-CCCCCcEEEcccCCCcccccccccc-
Q 006922 133 DFSVWKNLTIINLSDNGFNGTIPRS--LSNLTQLEALYLANNSLSGKIPD--L-NLPNLQQLNLANNNLSGSIPQSLKR- 206 (625)
Q Consensus 133 ~~~~l~~L~~L~ls~N~l~~~~p~~--l~~l~~L~~L~l~~N~l~~~~p~--~-~l~~L~~L~l~~N~l~g~~p~~l~~- 206 (625)
.|..+++|++|+|++|.+++.+|.. +.++++|++|+|++|.+++..+. . .+++|+.|+|++|.+++..|..+..
T Consensus 92 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l 171 (844)
T 3j0a_A 92 AFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPL 171 (844)
T ss_dssp SSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHH
T ss_pred HccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccc
Confidence 6899999999999999999877665 89999999999999999887653 2 7899999999999999888877654
Q ss_pred ----CCCCcccCCCCC
Q 006922 207 ----FPSSAFVGNSIS 218 (625)
Q Consensus 207 ----~~~~~~~~n~~~ 218 (625)
+..+.+.+|.+.
T Consensus 172 ~~~~L~~L~L~~n~l~ 187 (844)
T 3j0a_A 172 QGKTLSFFSLAANSLY 187 (844)
T ss_dssp HHCSSCCCEECCSBSC
T ss_pred cCCccceEECCCCccc
Confidence 344455555543
No 324
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.54 E-value=6.6e-15 Score=161.95 Aligned_cols=153 Identities=22% Similarity=0.377 Sum_probs=119.2
Q ss_pred CCCCCCCCCC----CCCce-EeCCCCCeEEEEEcCCCCcccccCcccccCCCCccEEEecCCCCCccCCccccccccccc
Q 006922 45 NWNESTSVCN----HWTGV-KCSEDGKRVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPSDFINLKSLCY 119 (625)
Q Consensus 45 ~w~~~~~~c~----~w~gv-~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~ 119 (625)
+|..+..+|. .|.|+ .|.. .+++.|+|++|++++ +|+. + +++|++|+|++|.|+. +| ..+++|++
T Consensus 35 ~W~~~~~~~~~~~~~~~~l~~C~~--~~L~~L~Ls~n~L~~-lp~~-l--~~~L~~L~Ls~N~l~~-ip---~~l~~L~~ 104 (571)
T 3cvr_A 35 KWEKQALPGENRNEAVSLLKECLI--NQFSELQLNRLNLSS-LPDN-L--PPQITVLEITQNALIS-LP---ELPASLEY 104 (571)
T ss_dssp HHHTTCCTTCCHHHHHHHHHHHHH--TTCSEEECCSSCCSC-CCSC-C--CTTCSEEECCSSCCSC-CC---CCCTTCCE
T ss_pred HHhccCCccccccchhhhcccccc--CCccEEEeCCCCCCc-cCHh-H--cCCCCEEECcCCCCcc-cc---cccCCCCE
Confidence 5765666673 49999 7875 368899999999997 7765 4 3889999999999995 67 45789999
Q ss_pred ccccccccCCCCCCcccccccceecCCCccCCCCCCCCccccccccceecccccccccCCCCCCCCCcEEEcccCCCccc
Q 006922 120 LYLQFNNFSGTLPDFSVWKNLTIINLSDNGFNGTIPRSLSNLTQLEALYLANNSLSGKIPDLNLPNLQQLNLANNNLSGS 199 (625)
Q Consensus 120 L~L~~N~l~~~~p~~~~l~~L~~L~ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~l~~L~~L~l~~N~l~g~ 199 (625)
|+|++|+|++ +|.+.. +|+.|+|++|+|++ +|. .+++|+.|+|++|+|++ +|. .+++|+.|+|++|+|++
T Consensus 105 L~Ls~N~l~~-ip~l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~-~l~~L~~L~Ls~N~L~~- 174 (571)
T 3cvr_A 105 LDACDNRLST-LPELPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE-LPTSLEVLSVRNNQLTF- 174 (571)
T ss_dssp EECCSSCCSC-CCCCCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CCTTCCEEECCSSCCSC-
T ss_pred EEccCCCCCC-cchhhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC-cCCCcCEEECCCCCCCC-
Confidence 9999999997 555544 89999999999986 666 57889999999999987 555 67889999999999886
Q ss_pred cccccc-cCCCCcccCCCCC
Q 006922 200 IPQSLK-RFPSSAFVGNSIS 218 (625)
Q Consensus 200 ~p~~l~-~~~~~~~~~n~~~ 218 (625)
+|. +. ++..+.+.+|.+.
T Consensus 175 lp~-l~~~L~~L~Ls~N~L~ 193 (571)
T 3cvr_A 175 LPE-LPESLEALDVSTNLLE 193 (571)
T ss_dssp CCC-CCTTCCEEECCSSCCS
T ss_pred cch-hhCCCCEEECcCCCCC
Confidence 666 43 3444555666544
No 325
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.54 E-value=2.2e-15 Score=136.36 Aligned_cols=123 Identities=26% Similarity=0.241 Sum_probs=75.9
Q ss_pred eEEEEEcCCCCcc-cccCcccccCCCCccEEEecCCCCCccCCcccccccccccccccccccCCCCCC-cccccccceec
Q 006922 67 RVVAVRLPGVGFS-GLIPPNTISRLSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSGTLPD-FSVWKNLTIIN 144 (625)
Q Consensus 67 ~v~~l~l~~~~l~-g~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~ 144 (625)
+++.|++++|+++ +.+|+ .++.+++|++|+|++|.+++. ..+.++++|++|+|++|++++.+|. +..+++|++|+
T Consensus 18 ~l~~L~l~~n~l~~~~~~~-~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 18 DVKELVLDNSRSNEGKLEG-LTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GCSEEECTTCBCBTTBCCS-CCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred cCeEEEccCCcCChhHHHH-HHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 4566666666666 55554 366666666777766666654 4566666666666666666665553 34466666666
Q ss_pred CCCccCCCC-CCCCccccccccceecccccccccCC---C-C-CCCCCcEEEcc
Q 006922 145 LSDNGFNGT-IPRSLSNLTQLEALYLANNSLSGKIP---D-L-NLPNLQQLNLA 192 (625)
Q Consensus 145 ls~N~l~~~-~p~~l~~l~~L~~L~l~~N~l~~~~p---~-~-~l~~L~~L~l~ 192 (625)
+++|++++. .+..+..+++|++|++++|.+++..+ . . .+++|+.|+++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 666666642 23556666666666666666665544 1 1 45666666654
No 326
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.53 E-value=7.9e-15 Score=162.73 Aligned_cols=141 Identities=24% Similarity=0.287 Sum_probs=73.7
Q ss_pred eEEEEEcCCCCcccccC-cccccCCCCccEEEecCCCCCccCCcccccccccccccccccccCCCCC--Cccccccccee
Q 006922 67 RVVAVRLPGVGFSGLIP-PNTISRLSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSGTLP--DFSVWKNLTII 143 (625)
Q Consensus 67 ~v~~l~l~~~~l~g~~~-~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p--~~~~l~~L~~L 143 (625)
.++.|++++|.+++... +..+..+++|++|++++|.+.+..+ .+..+++|++|++++|.+.+..| .+..+++|++|
T Consensus 348 ~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L 426 (570)
T 2z63_A 348 SLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSS-NFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYL 426 (570)
T ss_dssp TCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEE-EEETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEE
T ss_pred CCCEEeCcCCccCccccccccccccCccCEEECCCCccccccc-cccccCCCCEEEccCCccccccchhhhhcCCCCCEE
Confidence 45566666666654320 1235555666666666665555332 25555555555555555554443 34555555555
Q ss_pred cCCCccCCCCCCCCccccccccceeccccccc-ccCCCC--CCCCCcEEEcccCCCccccccccccCC
Q 006922 144 NLSDNGFNGTIPRSLSNLTQLEALYLANNSLS-GKIPDL--NLPNLQQLNLANNNLSGSIPQSLKRFP 208 (625)
Q Consensus 144 ~ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~-~~~p~~--~l~~L~~L~l~~N~l~g~~p~~l~~~~ 208 (625)
++++|++++..|..+..+++|++|+|++|.++ +.+|.. .+++|+.|+|++|++++..|..+..++
T Consensus 427 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 494 (570)
T 2z63_A 427 DISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLS 494 (570)
T ss_dssp ECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCT
T ss_pred eCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhccc
Confidence 55555555555555555555555555555554 334432 455555555555555544454444443
No 327
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.53 E-value=3e-15 Score=135.40 Aligned_cols=124 Identities=21% Similarity=0.259 Sum_probs=108.1
Q ss_pred CCCCccEEEecCCCCC-ccCCcccccccccccccccccccCCCCCCcccccccceecCCCccCCCCCCCCccccccccce
Q 006922 89 RLSALKILSLRSNVIT-GYFPSDFINLKSLCYLYLQFNNFSGTLPDFSVWKNLTIINLSDNGFNGTIPRSLSNLTQLEAL 167 (625)
Q Consensus 89 ~l~~L~~L~l~~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~ls~N~l~~~~p~~l~~l~~L~~L 167 (625)
..++|+.|++++|.++ +.+|..+..+++|++|+|++|.+++. +.+..+++|++|+|++|++++.+|..+..+++|++|
T Consensus 15 ~~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI-ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp CGGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC-TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CCccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc-hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 4578999999999999 78898999999999999999999977 889999999999999999998788888889999999
Q ss_pred ecccccccccC--CCC-CCCCCcEEEcccCCCccccc---cccccCCCCccc
Q 006922 168 YLANNSLSGKI--PDL-NLPNLQQLNLANNNLSGSIP---QSLKRFPSSAFV 213 (625)
Q Consensus 168 ~l~~N~l~~~~--p~~-~l~~L~~L~l~~N~l~g~~p---~~l~~~~~~~~~ 213 (625)
++++|++++.. ... .+++|+.|++++|++++..+ ..+..++++...
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L 145 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYL 145 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEE
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccc
Confidence 99999999742 233 78999999999999997655 467777776543
No 328
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.53 E-value=2.1e-14 Score=160.37 Aligned_cols=110 Identities=22% Similarity=0.245 Sum_probs=99.2
Q ss_pred eEEEEEcCCCCcccccCcccccCCCCccEEEecCCCCCccCCcccccccccccccccccccCCCCCC-cccccccceecC
Q 006922 67 RVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSGTLPD-FSVWKNLTIINL 145 (625)
Q Consensus 67 ~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~l 145 (625)
.+..|+|++|.+.+..+ ..|+.+++|++|+|++|.|++..|..|+++++|++|+|++|.+++.++. |+.+++|++|+|
T Consensus 76 ~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 154 (597)
T 3oja_B 76 QVELLNLNDLQIEEIDT-YAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSM 154 (597)
T ss_dssp CCSEEECTTSCCCEECT-TTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCcEEECCCCCCCCCCh-HHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEe
Confidence 57789999999997544 4699999999999999999998888899999999999999999976665 689999999999
Q ss_pred CCccCCCCCCCCccccccccceeccccccccc
Q 006922 146 SDNGFNGTIPRSLSNLTQLEALYLANNSLSGK 177 (625)
Q Consensus 146 s~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~ 177 (625)
++|.|++..|..|+.+++|++|+|++|.+++.
T Consensus 155 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 186 (597)
T 3oja_B 155 SNNNLERIEDDTFQATTSLQNLQLSSNRLTHV 186 (597)
T ss_dssp CSSCCCBCCTTTTTTCTTCCEEECTTSCCSBC
T ss_pred eCCcCCCCChhhhhcCCcCcEEECcCCCCCCc
Confidence 99999988888999999999999999998763
No 329
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.53 E-value=1.4e-14 Score=160.68 Aligned_cols=144 Identities=20% Similarity=0.234 Sum_probs=126.3
Q ss_pred CeEEEEEcCCCCcccccCcccccCCCCccEEEecCCCCCccCCcccccccccccccccccccCCCCC-Ccccccccceec
Q 006922 66 KRVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSGTLP-DFSVWKNLTIIN 144 (625)
Q Consensus 66 ~~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~ 144 (625)
..++.|+|++|++++.. +..|.++++|++|+|++|.+++..|..|.++++|++|+|++|++++..| .|..+++|++|+
T Consensus 28 ~~l~~L~Ls~n~l~~~~-~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (570)
T 2z63_A 28 FSTKNLDLSFNPLRHLG-SYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLV 106 (570)
T ss_dssp SSCCEEECCSCCCCEEC-TTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEE
T ss_pred ccccEEEccCCccCccC-hhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCcccccccc
Confidence 35889999999998754 4469999999999999999999888899999999999999999998776 689999999999
Q ss_pred CCCccCCCCCCCCccccccccceecccccccc-cCCCC--CCCCCcEEEcccCCCccccccccccCCCC
Q 006922 145 LSDNGFNGTIPRSLSNLTQLEALYLANNSLSG-KIPDL--NLPNLQQLNLANNNLSGSIPQSLKRFPSS 210 (625)
Q Consensus 145 ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~-~~p~~--~l~~L~~L~l~~N~l~g~~p~~l~~~~~~ 210 (625)
+++|++++..+..++.+++|++|+|++|.+++ .+|.. .+++|+.|++++|++++..|..++.+..+
T Consensus 107 L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 175 (570)
T 2z63_A 107 AVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQM 175 (570)
T ss_dssp CTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTC
T ss_pred ccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhcc
Confidence 99999997666679999999999999999987 45653 79999999999999998777777665544
No 330
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.53 E-value=4.2e-14 Score=147.76 Aligned_cols=157 Identities=22% Similarity=0.272 Sum_probs=125.1
Q ss_pred CCCCCCCCceEeCCCCCeEEEEEcCCCCcccccCcccccCCCCccEEEecCCCCCccCCcccc-cccccccccccccccC
Q 006922 50 TSVCNHWTGVKCSEDGKRVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPSDFI-NLKSLCYLYLQFNNFS 128 (625)
Q Consensus 50 ~~~c~~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~ 128 (625)
...| -....|..+ .+++.+++|.. +|.. + ...++.|+|++|+|++..+..|. ++++|++|+|++|+|+
T Consensus 9 ~~~C--p~~C~C~~~-----~l~c~~~~l~~-iP~~-~--~~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~ 77 (361)
T 2xot_A 9 VVSC--PANCLCASN-----ILSCSKQQLPN-VPQS-L--PSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLN 77 (361)
T ss_dssp CTTC--CTTCEEETT-----EEECCSSCCSS-CCSS-C--CTTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCC
T ss_pred CCCC--CCCCEECCC-----EEEeCCCCcCc-cCcc-C--CCCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCC
Confidence 3456 356778642 47888999885 6654 3 34689999999999998888787 9999999999999999
Q ss_pred CCCC-CcccccccceecCCCccCCCCCCCCccccccccceecccccccccCCCC--CCCCCcEEEcccCCCcccccccc-
Q 006922 129 GTLP-DFSVWKNLTIINLSDNGFNGTIPRSLSNLTQLEALYLANNSLSGKIPDL--NLPNLQQLNLANNNLSGSIPQSL- 204 (625)
Q Consensus 129 ~~~p-~~~~l~~L~~L~ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~L~l~~N~l~g~~p~~l- 204 (625)
+..+ .|..+++|++|+|++|+|++..+..|..+++|+.|+|++|+|++..|.. .+++|+.|+|++|+|++..+..+
T Consensus 78 ~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~ 157 (361)
T 2xot_A 78 FISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIK 157 (361)
T ss_dssp EECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC
T ss_pred ccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhc
Confidence 8776 5999999999999999999777778999999999999999999887753 78999999999999995333333
Q ss_pred --ccCCC---CcccCCCC
Q 006922 205 --KRFPS---SAFVGNSI 217 (625)
Q Consensus 205 --~~~~~---~~~~~n~~ 217 (625)
..++. +.+.+|.+
T Consensus 158 ~~~~l~~L~~L~L~~N~l 175 (361)
T 2xot_A 158 DGNKLPKLMLLDLSSNKL 175 (361)
T ss_dssp ----CTTCCEEECCSSCC
T ss_pred CcccCCcCCEEECCCCCC
Confidence 33444 44445543
No 331
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.52 E-value=3.2e-15 Score=172.01 Aligned_cols=149 Identities=20% Similarity=0.309 Sum_probs=128.6
Q ss_pred CeEEEEEcCCCCccc-----------------ccCccccc--CCCCccEEEecCCCCCccCCcccccccccccccccccc
Q 006922 66 KRVVAVRLPGVGFSG-----------------LIPPNTIS--RLSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNN 126 (625)
Q Consensus 66 ~~v~~l~l~~~~l~g-----------------~~~~~~~~--~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 126 (625)
..++.|+|++|.++| .+|+. ++ +|++|++|+|++|.+.+.+|..|.++++|+.|+|++|+
T Consensus 448 ~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~-l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~ 526 (876)
T 4ecn_A 448 TKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEE-LSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNR 526 (876)
T ss_dssp TTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSC-CCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCT
T ss_pred CCCCEEECcCCcCCCCcccccccccccccccccCChh-hhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCC
Confidence 358889999999999 47775 77 99999999999999999999999999999999999998
Q ss_pred -cCC-CCC-Cccccc-------ccceecCCCccCCCCCCC--CccccccccceecccccccccCCCC-CCCCCcEEEccc
Q 006922 127 -FSG-TLP-DFSVWK-------NLTIINLSDNGFNGTIPR--SLSNLTQLEALYLANNSLSGKIPDL-NLPNLQQLNLAN 193 (625)
Q Consensus 127 -l~~-~~p-~~~~l~-------~L~~L~ls~N~l~~~~p~--~l~~l~~L~~L~l~~N~l~~~~p~~-~l~~L~~L~l~~ 193 (625)
++| .+| .++.++ +|+.|+|++|+|+ .+|. .++++++|+.|+|++|+++ .+|.. .+++|+.|+|++
T Consensus 527 ~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp~~~~L~~L~~L~Ls~ 604 (876)
T 4ecn_A 527 GISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLEAFGTNVKLTDLKLDY 604 (876)
T ss_dssp TSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCCCCCTTSEESEEECCS
T ss_pred CcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cchhhcCCCcceEEECcC
Confidence 998 676 455554 9999999999999 8898 8999999999999999999 77754 788999999999
Q ss_pred CCCccccccccccCCC----CcccCCCCC
Q 006922 194 NNLSGSIPQSLKRFPS----SAFVGNSIS 218 (625)
Q Consensus 194 N~l~g~~p~~l~~~~~----~~~~~n~~~ 218 (625)
|+++ .+|..+..++. +.+.+|.+.
T Consensus 605 N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~ 632 (876)
T 4ecn_A 605 NQIE-EIPEDFCAFTDQVEGLGFSHNKLK 632 (876)
T ss_dssp SCCS-CCCTTSCEECTTCCEEECCSSCCC
T ss_pred Cccc-cchHHHhhccccCCEEECcCCCCC
Confidence 9999 89987776665 445556544
No 332
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.52 E-value=9.1e-15 Score=135.12 Aligned_cols=124 Identities=21% Similarity=0.247 Sum_probs=107.7
Q ss_pred CCCCccEEEecCCCCC-ccCCcccccccccccccccccccCCCCCCcccccccceecCCCccCCCCCCCCccccccccce
Q 006922 89 RLSALKILSLRSNVIT-GYFPSDFINLKSLCYLYLQFNNFSGTLPDFSVWKNLTIINLSDNGFNGTIPRSLSNLTQLEAL 167 (625)
Q Consensus 89 ~l~~L~~L~l~~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~ls~N~l~~~~p~~l~~l~~L~~L 167 (625)
..++|+.|+|++|.++ +.+|..+..+++|++|+|++|.+++. +.+..+++|++|+|++|++++.+|..+..+++|++|
T Consensus 22 ~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 22 TPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV-SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp CTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC-SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred CcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh-hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 4578999999999998 77898899999999999999999977 889999999999999999998788888889999999
Q ss_pred ecccccccccC--CCC-CCCCCcEEEcccCCCccccc---cccccCCCCccc
Q 006922 168 YLANNSLSGKI--PDL-NLPNLQQLNLANNNLSGSIP---QSLKRFPSSAFV 213 (625)
Q Consensus 168 ~l~~N~l~~~~--p~~-~l~~L~~L~l~~N~l~g~~p---~~l~~~~~~~~~ 213 (625)
+|++|++++.. +.. .+++|+.|++++|++++..+ ..+..++.+...
T Consensus 101 ~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L 152 (168)
T 2ell_A 101 NLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYL 152 (168)
T ss_dssp ECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEE
T ss_pred eccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEe
Confidence 99999999754 233 78999999999999996554 367777766544
No 333
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.52 E-value=9.5e-15 Score=143.28 Aligned_cols=151 Identities=16% Similarity=0.172 Sum_probs=124.3
Q ss_pred CeEEEEEcCCCC-cccccCcccccCCCCccEEEecC-CCCCccCCcccccccccccccccccccCCCCCCcccccccc--
Q 006922 66 KRVVAVRLPGVG-FSGLIPPNTISRLSALKILSLRS-NVITGYFPSDFINLKSLCYLYLQFNNFSGTLPDFSVWKNLT-- 141 (625)
Q Consensus 66 ~~v~~l~l~~~~-l~g~~~~~~~~~l~~L~~L~l~~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~-- 141 (625)
.+++.|+|++|. ++ .+++..|..+++|++|+|++ |.+++..+..|.++++|++|+|++|++++ +|.+..+++|+
T Consensus 55 ~~L~~L~l~~n~~l~-~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~~~~l~~L~~L 132 (239)
T 2xwt_C 55 PNISRIYVSIDVTLQ-QLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPDLTKVYSTDIF 132 (239)
T ss_dssp TTCCEEEEECCSSCC-EECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCCCTTCCBCCSE
T ss_pred CCCcEEeCCCCCCcc-eeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccccccccccccc
Confidence 468899999997 55 56776799999999999999 99999878889999999999999999997 67788888888
Q ss_pred -eecCCCc-cCCCCCCCCcccccccc-ceecccccccccCCCC-CCCCCcEEEcccCC-CccccccccccC-CC---Ccc
Q 006922 142 -IINLSDN-GFNGTIPRSLSNLTQLE-ALYLANNSLSGKIPDL-NLPNLQQLNLANNN-LSGSIPQSLKRF-PS---SAF 212 (625)
Q Consensus 142 -~L~ls~N-~l~~~~p~~l~~l~~L~-~L~l~~N~l~~~~p~~-~l~~L~~L~l~~N~-l~g~~p~~l~~~-~~---~~~ 212 (625)
.|++++| ++++..+..|..+++|+ .|++++|+++...+.. ..++|+.|+|++|+ +++..+..+..+ +. +.+
T Consensus 133 ~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l 212 (239)
T 2xwt_C 133 FILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDV 212 (239)
T ss_dssp EEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTTCEEEEEECTTCTTCCEECTTTTTTCSBCCSEEEC
T ss_pred cEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCCCCCCEEEcCCCCCcccCCHHHhhccccCCcEEEC
Confidence 9999999 99977677799999999 9999999999443332 44789999999995 985556666655 54 444
Q ss_pred cCCCCC
Q 006922 213 VGNSIS 218 (625)
Q Consensus 213 ~~n~~~ 218 (625)
.+|.+.
T Consensus 213 ~~N~l~ 218 (239)
T 2xwt_C 213 SQTSVT 218 (239)
T ss_dssp TTCCCC
T ss_pred CCCccc
Confidence 555543
No 334
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.52 E-value=1.8e-15 Score=154.74 Aligned_cols=134 Identities=23% Similarity=0.275 Sum_probs=83.8
Q ss_pred eEEEEEcCCCCcccccCcccc-cCCCCccEEEecCCCCCccCCcccccc-----cccccccccccccCCCCC-Ccccccc
Q 006922 67 RVVAVRLPGVGFSGLIPPNTI-SRLSALKILSLRSNVITGYFPSDFINL-----KSLCYLYLQFNNFSGTLP-DFSVWKN 139 (625)
Q Consensus 67 ~v~~l~l~~~~l~g~~~~~~~-~~l~~L~~L~l~~N~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~~p-~~~~l~~ 139 (625)
+++.|+|++|.+++.+|...+ +.+++|++|+|++|.+++. |..+..+ ++|++|+|++|++++..| .+..+++
T Consensus 96 ~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~ 174 (312)
T 1wwl_A 96 GLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPA 174 (312)
T ss_dssp CCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSS
T ss_pred CccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCC
Confidence 466677777777776665422 6677777777777777765 6666666 677777777777766554 5666777
Q ss_pred cceecCCCccCCCC--CCCCc--cccccccceeccccccccc--CC-CC--CCCCCcEEEcccCCCccccc
Q 006922 140 LTIINLSDNGFNGT--IPRSL--SNLTQLEALYLANNSLSGK--IP-DL--NLPNLQQLNLANNNLSGSIP 201 (625)
Q Consensus 140 L~~L~ls~N~l~~~--~p~~l--~~l~~L~~L~l~~N~l~~~--~p-~~--~l~~L~~L~l~~N~l~g~~p 201 (625)
|++|+|++|++.+. +|..+ ..+++|++|+|++|++++. ++ .. .+++|+.|+|++|++++.+|
T Consensus 175 L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 245 (312)
T 1wwl_A 175 LSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAG 245 (312)
T ss_dssp CCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCC
T ss_pred CCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccc
Confidence 77777777776553 22222 5666666666666666631 11 11 45666666666666665553
No 335
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.52 E-value=2.7e-14 Score=135.26 Aligned_cols=126 Identities=28% Similarity=0.356 Sum_probs=107.6
Q ss_pred cEEEecCCCCCccCCcccccccccccccccccccCCCCCCcccccccceecCCCccCCCCCCCCccccccccceeccccc
Q 006922 94 KILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSGTLPDFSVWKNLTIINLSDNGFNGTIPRSLSNLTQLEALYLANNS 173 (625)
Q Consensus 94 ~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~ls~N~l~~~~p~~l~~l~~L~~L~l~~N~ 173 (625)
+.+++++|.++. +|..+. ++|++|+|++|+++.....|..+++|+.|+|++|+|++..+..|..+++|++|+|++|+
T Consensus 13 ~~l~~~~~~l~~-ip~~~~--~~l~~L~L~~n~i~~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 13 TVVRCSNKGLKV-LPKGIP--RDVTELYLDGNQFTLVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp TEEECTTSCCSS-CCSCCC--TTCCEEECCSSCCCSCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred CEEEcCCCCCCc-CCCCCC--CCCCEEECCCCcCchhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCc
Confidence 579999999996 676653 68999999999998544479999999999999999998888889999999999999999
Q ss_pred ccccCCCC--CCCCCcEEEcccCCCccccccccccCC---CCcccCCCCCCCCC
Q 006922 174 LSGKIPDL--NLPNLQQLNLANNNLSGSIPQSLKRFP---SSAFVGNSISFDEN 222 (625)
Q Consensus 174 l~~~~p~~--~l~~L~~L~l~~N~l~g~~p~~l~~~~---~~~~~~n~~~~~~~ 222 (625)
|++..|.. .+++|+.|+|++|+|++..+..+..++ .+.+.+|++.|++.
T Consensus 90 l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c~ 143 (193)
T 2wfh_A 90 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCN 143 (193)
T ss_dssp CCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSGG
T ss_pred cCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCCc
Confidence 99888753 789999999999999965555566554 46778999998764
No 336
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.52 E-value=8.3e-15 Score=159.27 Aligned_cols=148 Identities=17% Similarity=0.183 Sum_probs=86.2
Q ss_pred eEEEEEcCCCCcccccCcccccCCCCccEEEecCCCCCccCCc----------------ccccccccccccccccccCCC
Q 006922 67 RVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPS----------------DFINLKSLCYLYLQFNNFSGT 130 (625)
Q Consensus 67 ~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~~~p~----------------~~~~l~~L~~L~L~~N~l~~~ 130 (625)
.+..|+|++|.+++..| ++.+++|++|+|++|.|++..+. ....+++|+.|+|++|.+++.
T Consensus 59 ~L~~L~Ls~N~l~~~~~---l~~l~~L~~L~Ls~N~l~~l~~~~~L~~L~L~~N~l~~~~~~~l~~L~~L~L~~N~l~~~ 135 (487)
T 3oja_A 59 KLELLNLSSNVLYETLD---LESLSTLRTLDLNNNYVQELLVGPSIETLHAANNNISRVSCSRGQGKKNIYLANNKITML 135 (487)
T ss_dssp TCCEEECTTSCCEEEEE---CTTCTTCCEEECCSSEEEEEEECTTCCEEECCSSCCCCEEECCCSSCEEEECCSSCCCSG
T ss_pred CCCEEEeeCCCCCCCcc---cccCCCCCEEEecCCcCCCCCCCCCcCEEECcCCcCCCCCccccCCCCEEECCCCCCCCC
Confidence 35556666666655432 55555555555555555432111 001234455555555666555
Q ss_pred CC-CcccccccceecCCCccCCCCCCCCcc-ccccccceecccccccccCCCCCCCCCcEEEcccCCCccccccccccCC
Q 006922 131 LP-DFSVWKNLTIINLSDNGFNGTIPRSLS-NLTQLEALYLANNSLSGKIPDLNLPNLQQLNLANNNLSGSIPQSLKRFP 208 (625)
Q Consensus 131 ~p-~~~~l~~L~~L~ls~N~l~~~~p~~l~-~l~~L~~L~l~~N~l~~~~p~~~l~~L~~L~l~~N~l~g~~p~~l~~~~ 208 (625)
.| .++.+++|+.|+|++|.|++.+|..+. .+++|+.|+|++|.|++..+...+++|+.|+|++|+|++. |..+..++
T Consensus 136 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~ 214 (487)
T 3oja_A 136 RDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKGQVVFAKLKTLDLSSNKLAFM-GPEFQSAA 214 (487)
T ss_dssp GGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEECCCCCTTCCEEECCSSCCCEE-CGGGGGGT
T ss_pred CchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccccccccCCCCCEEECCCCCCCCC-CHhHcCCC
Confidence 44 466667777777777777766666664 5677777777777777664444677777788888877753 33355444
Q ss_pred C---CcccCCCCC
Q 006922 209 S---SAFVGNSIS 218 (625)
Q Consensus 209 ~---~~~~~n~~~ 218 (625)
. +.+.+|.+.
T Consensus 215 ~L~~L~Ls~N~l~ 227 (487)
T 3oja_A 215 GVTWISLRNNKLV 227 (487)
T ss_dssp TCSEEECTTSCCC
T ss_pred CccEEEecCCcCc
Confidence 4 344455433
No 337
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.51 E-value=1.1e-14 Score=160.98 Aligned_cols=152 Identities=20% Similarity=0.236 Sum_probs=86.4
Q ss_pred eEEEEEcCCCCcccccCc--ccccCCCCccEEEecCCCCCccCC--cccccccccccccccccccCCCCCCcccccccce
Q 006922 67 RVVAVRLPGVGFSGLIPP--NTISRLSALKILSLRSNVITGYFP--SDFINLKSLCYLYLQFNNFSGTLPDFSVWKNLTI 142 (625)
Q Consensus 67 ~v~~l~l~~~~l~g~~~~--~~~~~l~~L~~L~l~~N~l~~~~p--~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~ 142 (625)
.++.|+|++|.+.+.+|+ ..++.+++|++|+|++|.+++..+ ..+..+++|++|+|++|++++.++.+..+++|++
T Consensus 335 ~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~lp~~~~~~~~L~~ 414 (549)
T 2z81_A 335 SLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFHPMPDSCQWPEKMRF 414 (549)
T ss_dssp TCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCCCCCSCCCCCTTCCE
T ss_pred cccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCccCChhhcccccccE
Confidence 456677777777665542 235666777777777777765322 3466677777777777777643335666666666
Q ss_pred ecCCCccCCCCCCCCc------------------cccccccceecccccccccCCCC-CCCCCcEEEcccCCCccccccc
Q 006922 143 INLSDNGFNGTIPRSL------------------SNLTQLEALYLANNSLSGKIPDL-NLPNLQQLNLANNNLSGSIPQS 203 (625)
Q Consensus 143 L~ls~N~l~~~~p~~l------------------~~l~~L~~L~l~~N~l~~~~p~~-~l~~L~~L~l~~N~l~g~~p~~ 203 (625)
|+|++|+++. +|..+ ..+++|++|+|++|+|+ .+|.. .+++|+.|+|++|+|++.+|..
T Consensus 415 L~Ls~N~l~~-l~~~~~~~L~~L~Ls~N~l~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~l~~L~~L~Ls~N~l~~~~~~~ 492 (549)
T 2z81_A 415 LNLSSTGIRV-VKTCIPQTLEVLDVSNNNLDSFSLFLPRLQELYISRNKLK-TLPDASLFPVLLVMKISRNQLKSVPDGI 492 (549)
T ss_dssp EECTTSCCSC-CCTTSCTTCSEEECCSSCCSCCCCCCTTCCEEECCSSCCS-SCCCGGGCTTCCEEECCSSCCCCCCTTG
T ss_pred EECCCCCccc-ccchhcCCceEEECCCCChhhhcccCChhcEEECCCCccC-cCCCcccCccCCEEecCCCccCCcCHHH
Confidence 6666666652 23222 23455555555555555 33332 4555666666666666555544
Q ss_pred cccCCC---CcccCCCCCCC
Q 006922 204 LKRFPS---SAFVGNSISFD 220 (625)
Q Consensus 204 l~~~~~---~~~~~n~~~~~ 220 (625)
+..++. +.+.+|++.|+
T Consensus 493 ~~~l~~L~~L~l~~N~~~~~ 512 (549)
T 2z81_A 493 FDRLTSLQKIWLHTNPWDCS 512 (549)
T ss_dssp GGGCTTCCEEECCSSCBCCC
T ss_pred HhcCcccCEEEecCCCccCC
Confidence 444333 34455555554
No 338
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.51 E-value=1.7e-14 Score=156.58 Aligned_cols=145 Identities=26% Similarity=0.236 Sum_probs=127.8
Q ss_pred CeEEEEEcCCCCcccccCcccccCCCCccEEEecCCCCCccCCcccccccccccccccccccCCCCC-Ccccccccceec
Q 006922 66 KRVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSGTLP-DFSVWKNLTIIN 144 (625)
Q Consensus 66 ~~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~ 144 (625)
..++.|+|++|.+++..| ..|.++++|++|+|++|.+++..+..|.++++|++|+|++|++++.+| .|..+++|+.|+
T Consensus 56 ~~L~~L~L~~n~i~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 134 (477)
T 2id5_A 56 PHLEELELNENIVSAVEP-GAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLE 134 (477)
T ss_dssp TTCCEEECTTSCCCEECT-TTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCEEECCCCccCEeCh-hhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEE
Confidence 468899999999997655 469999999999999999998777778999999999999999998777 689999999999
Q ss_pred CCCccCCCCCCCCccccccccceecccccccccCCC--CCCCCCcEEEcccCCCccccccccccCCCCc
Q 006922 145 LSDNGFNGTIPRSLSNLTQLEALYLANNSLSGKIPD--LNLPNLQQLNLANNNLSGSIPQSLKRFPSSA 211 (625)
Q Consensus 145 ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~--~~l~~L~~L~l~~N~l~g~~p~~l~~~~~~~ 211 (625)
|++|.+++..|..|..+++|+.|+|++|++++..+. ..+++|+.|+|++|.+++..+..+..++.+.
T Consensus 135 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~ 203 (477)
T 2id5_A 135 VGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLK 203 (477)
T ss_dssp ECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCC
T ss_pred CCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccc
Confidence 999999988888999999999999999999976554 2789999999999999987777777766543
No 339
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.49 E-value=1.3e-13 Score=142.32 Aligned_cols=146 Identities=25% Similarity=0.377 Sum_probs=96.3
Q ss_pred EEEEEcCCCCcccccCcccccCCCCccEEEecCCCCC--ccCCcccccccccccccccccccCCCCCCcccccccceecC
Q 006922 68 VVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVIT--GYFPSDFINLKSLCYLYLQFNNFSGTLPDFSVWKNLTIINL 145 (625)
Q Consensus 68 v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~--~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l 145 (625)
++.|++++|.+.+ +++..|..+++|+.|++++|.++ +..|..+..+ +|++|++++|++++....+. ++|+.|++
T Consensus 125 L~~L~l~~n~i~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~l~~~~~--~~L~~L~l 200 (332)
T 2ft3_A 125 LVELRIHDNRIRK-VPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTGIPKDLP--ETLNELHL 200 (332)
T ss_dssp CCEEECCSSCCCC-CCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSSCCSSSC--SSCSCCBC
T ss_pred CCEEECCCCccCc-cCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCccCcccc--CCCCEEEC
Confidence 4444455555442 33444566666666666666664 2455555555 66666666666654322222 67888888
Q ss_pred CCccCCCCCCCCccccccccceecccccccccCCCC--CCCCCcEEEcccCCCccccccccccCCCC---cccCCCCC
Q 006922 146 SDNGFNGTIPRSLSNLTQLEALYLANNSLSGKIPDL--NLPNLQQLNLANNNLSGSIPQSLKRFPSS---AFVGNSIS 218 (625)
Q Consensus 146 s~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~L~l~~N~l~g~~p~~l~~~~~~---~~~~n~~~ 218 (625)
++|++++..+..+..+++|+.|+|++|++++..+.. .+++|+.|+|++|+++ .+|..+..++.+ .+.+|.+.
T Consensus 201 ~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~ 277 (332)
T 2ft3_A 201 DHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNIT 277 (332)
T ss_dssp CSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCC
T ss_pred CCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCC
Confidence 888888777778888888888888888888776642 6788888888888888 778777766654 44555544
No 340
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.49 E-value=2e-14 Score=136.56 Aligned_cols=127 Identities=20% Similarity=0.276 Sum_probs=107.7
Q ss_pred eEEEEEcCCCCcccccCcccccCCCCccEEEecCCCCCccCCcccccccccccccccccccCCCCC-CcccccccceecC
Q 006922 67 RVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSGTLP-DFSVWKNLTIINL 145 (625)
Q Consensus 67 ~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l 145 (625)
.++.|++++|.+.. ++ .+..+++|++|++++|.+++..|..|..+++|++|+|++|++++..| .+..+++|++|+|
T Consensus 67 ~L~~L~l~~n~~~~--~~-~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L 143 (197)
T 4ezg_A 67 NIKDLTINNIHATN--YN-PISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDL 143 (197)
T ss_dssp TCSEEEEESCCCSC--CG-GGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEEC
T ss_pred CCCEEEccCCCCCc--ch-hhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEc
Confidence 57889999996653 33 59999999999999999998888899999999999999999997555 6889999999999
Q ss_pred CCcc-CCCCCCCCccccccccceecccccccccCCCCCCCCCcEEEcccCCCcc
Q 006922 146 SDNG-FNGTIPRSLSNLTQLEALYLANNSLSGKIPDLNLPNLQQLNLANNNLSG 198 (625)
Q Consensus 146 s~N~-l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~l~~L~~L~l~~N~l~g 198 (625)
++|. ++ .+| .+..+++|+.|++++|++++..+-..+++|+.|++++|++.+
T Consensus 144 ~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~~~~l~~l~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 144 SYNGAIT-DIM-PLKTLPELKSLNIQFDGVHDYRGIEDFPKLNQLYAFSQTIGG 195 (197)
T ss_dssp CSCTBCC-CCG-GGGGCSSCCEEECTTBCCCCCTTGGGCSSCCEEEECBC----
T ss_pred cCCCCcc-ccH-hhcCCCCCCEEECCCCCCcChHHhccCCCCCEEEeeCcccCC
Confidence 9998 65 566 689999999999999999975433489999999999999864
No 341
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.48 E-value=1.1e-14 Score=148.74 Aligned_cols=140 Identities=20% Similarity=0.186 Sum_probs=99.5
Q ss_pred EEEEEcCCCCcccccCcccc-cCCCCccEEEecCCCCCccCC----cccccccccccccccccccCCCCC-Ccccccccc
Q 006922 68 VVAVRLPGVGFSGLIPPNTI-SRLSALKILSLRSNVITGYFP----SDFINLKSLCYLYLQFNNFSGTLP-DFSVWKNLT 141 (625)
Q Consensus 68 v~~l~l~~~~l~g~~~~~~~-~~l~~L~~L~l~~N~l~~~~p----~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~ 141 (625)
++.|+|.+|.+.+..|...+ ..+++|++|+|++|.+++..+ ..+..+++|++|+|++|++++.++ .+..+++|+
T Consensus 93 L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 172 (310)
T 4glp_A 93 LKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPALT 172 (310)
T ss_dssp CCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTCC
T ss_pred eeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCCC
Confidence 77778888888877776522 778888888888888877555 344567788888888888877665 577788888
Q ss_pred eecCCCccCCCC--C--CCCccccccccceecccccccccCCC---C--CCCCCcEEEcccCCCccccccccccC
Q 006922 142 IINLSDNGFNGT--I--PRSLSNLTQLEALYLANNSLSGKIPD---L--NLPNLQQLNLANNNLSGSIPQSLKRF 207 (625)
Q Consensus 142 ~L~ls~N~l~~~--~--p~~l~~l~~L~~L~l~~N~l~~~~p~---~--~l~~L~~L~l~~N~l~g~~p~~l~~~ 207 (625)
+|+|++|++.+. + +..+..+++|++|+|++|+++...+. . .+++|+.|+|++|+|++.+|..+..+
T Consensus 173 ~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~ 247 (310)
T 4glp_A 173 SLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRC 247 (310)
T ss_dssp EEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSC
T ss_pred EEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhc
Confidence 888888887642 2 22346777888888888888632221 1 56788888888888887777665544
No 342
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.48 E-value=6.1e-14 Score=141.87 Aligned_cols=143 Identities=26% Similarity=0.369 Sum_probs=109.2
Q ss_pred CeEEEEEcCCCCcccccCcccccCCCCccEEEecCCCCCccCCcccccccccccccccccccCCCCCCcccccccceecC
Q 006922 66 KRVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSGTLPDFSVWKNLTIINL 145 (625)
Q Consensus 66 ~~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l 145 (625)
..++.|+|++|.+++.. + +..+++|++|+|++|.+++ +| .+..+++|++|+|++|++++ ++.+..+++|+.|++
T Consensus 68 ~~L~~L~L~~n~l~~~~-~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~~n~i~~-~~~l~~l~~L~~L~l 141 (291)
T 1h6t_A 68 PNVTKLFLNGNKLTDIK-P--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGISD-INGLVHLPQLESLYL 141 (291)
T ss_dssp TTCCEEECCSSCCCCCG-G--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCCC-CGGGGGCTTCCEEEC
T ss_pred CCCCEEEccCCccCCCc-c--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEECCCCcCCC-ChhhcCCCCCCEEEc
Confidence 35778888888888643 2 8888888888888888886 33 48888888888888888885 477888888888889
Q ss_pred CCccCCCCCCCCccccccccceecccccccccCCCCCCCCCcEEEcccCCCccccccccccCCC---CcccCCCCC
Q 006922 146 SDNGFNGTIPRSLSNLTQLEALYLANNSLSGKIPDLNLPNLQQLNLANNNLSGSIPQSLKRFPS---SAFVGNSIS 218 (625)
Q Consensus 146 s~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~l~~L~~L~l~~N~l~g~~p~~l~~~~~---~~~~~n~~~ 218 (625)
++|++++. ..+..+++|+.|+|++|++++..+-..+++|+.|+|++|++++ +|. +..++. +.+.+|++.
T Consensus 142 ~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~l~~l~~L~~L~L~~N~i~~-l~~-l~~l~~L~~L~l~~n~i~ 213 (291)
T 1h6t_A 142 GNNKITDI--TVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHISD-LRA-LAGLKNLDVLELFSQECL 213 (291)
T ss_dssp CSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCB-CGG-GTTCTTCSEEEEEEEEEE
T ss_pred cCCcCCcc--hhhccCCCCCEEEccCCccccchhhcCCCccCEEECCCCcCCC-Chh-hccCCCCCEEECcCCccc
Confidence 88888854 5678888888899998888877664478888889999988874 443 555544 344455543
No 343
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.48 E-value=4.5e-14 Score=156.52 Aligned_cols=139 Identities=26% Similarity=0.247 Sum_probs=112.8
Q ss_pred CeEEEEEcCCCCcccccCcccccCCCCccEEEecCCCCCccCCcccccccccccccccccccCCCCCCcccccccceecC
Q 006922 66 KRVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSGTLPDFSVWKNLTIINL 145 (625)
Q Consensus 66 ~~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l 145 (625)
..++.|+|++|.+++. ++..|+++++|++|+|++|.|++..|..|.++++|++|+|++|+++ .+|.. .+++|++|+|
T Consensus 52 ~~L~~L~Ls~N~i~~~-~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~-~l~~L~~L~L 128 (562)
T 3a79_B 52 PRTKALSLSQNSISEL-RMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC-PMASLRHLDL 128 (562)
T ss_dssp TTCCEEECCSSCCCCC-CGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC-CCTTCSEEEC
T ss_pred CCcCEEECCCCCcccc-ChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc-ccccCCEEEC
Confidence 3578899999998864 4556899999999999999999888888999999999999999998 55644 7889999999
Q ss_pred CCccCCC-CCCCCccccccccceecccccccccCCCCCCCCC--cEEEcccCCC--ccccccccccCC
Q 006922 146 SDNGFNG-TIPRSLSNLTQLEALYLANNSLSGKIPDLNLPNL--QQLNLANNNL--SGSIPQSLKRFP 208 (625)
Q Consensus 146 s~N~l~~-~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~l~~L--~~L~l~~N~l--~g~~p~~l~~~~ 208 (625)
++|++++ .+|..|+++++|++|+|++|++++. .-..+++| +.|++++|++ ++..|..+..+.
T Consensus 129 s~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~-~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~ 195 (562)
T 3a79_B 129 SFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL-DLLPVAHLHLSCILLDLVSYHIKGGETESLQIPN 195 (562)
T ss_dssp CSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT-TTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECC
T ss_pred CCCCccccCchHhhcccCcccEEecCCCccccC-chhhhhhceeeEEEeecccccccccCcccccccC
Confidence 9999986 3467889999999999999998752 21245555 9999999999 888888777654
No 344
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.48 E-value=1e-13 Score=141.36 Aligned_cols=143 Identities=25% Similarity=0.385 Sum_probs=105.9
Q ss_pred CeEEEEEcCCCCcccccCcccccCCCCccEEEecCCCCCccCCcccccccccccccccccccCCCCCCcccccccceecC
Q 006922 66 KRVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSGTLPDFSVWKNLTIINL 145 (625)
Q Consensus 66 ~~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l 145 (625)
.+++.|+|++|.+.+. ++ +..+++|++|+|++|.+++. | .+..+++|++|+|++|++++ ++.+..+++|+.|++
T Consensus 63 ~~L~~L~L~~n~i~~~-~~--~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~l~~n~l~~-~~~l~~l~~L~~L~l 136 (308)
T 1h6u_A 63 NNLIGLELKDNQITDL-AP--LKNLTKITELELSGNPLKNV-S-AIAGLQSIKTLDLTSTQITD-VTPLAGLSNLQVLYL 136 (308)
T ss_dssp TTCCEEECCSSCCCCC-GG--GTTCCSCCEEECCSCCCSCC-G-GGTTCTTCCEEECTTSCCCC-CGGGTTCTTCCEEEC
T ss_pred CCCCEEEccCCcCCCC-hh--HccCCCCCEEEccCCcCCCc-h-hhcCCCCCCEEECCCCCCCC-chhhcCCCCCCEEEC
Confidence 3577888888888754 33 88888888888888888863 3 58888888888888888875 455888888888888
Q ss_pred CCccCCCCCCCCccccccccceecccccccccCCCCCCCCCcEEEcccCCCccccccccccCCC---CcccCCCCC
Q 006922 146 SDNGFNGTIPRSLSNLTQLEALYLANNSLSGKIPDLNLPNLQQLNLANNNLSGSIPQSLKRFPS---SAFVGNSIS 218 (625)
Q Consensus 146 s~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~l~~L~~L~l~~N~l~g~~p~~l~~~~~---~~~~~n~~~ 218 (625)
++|++++..+ +..+++|+.|+|++|++++..+-..+++|+.|+|++|++++..+ +..++. +.+.+|.+.
T Consensus 137 ~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~ 208 (308)
T 1h6u_A 137 DLNQITNISP--LAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQIS 208 (308)
T ss_dssp CSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCC
T ss_pred CCCccCcCcc--ccCCCCccEEEccCCcCCCChhhcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccC
Confidence 8888875433 77888888888888888865553477888888888888875443 444443 445555544
No 345
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.47 E-value=1.2e-13 Score=145.72 Aligned_cols=110 Identities=22% Similarity=0.254 Sum_probs=96.8
Q ss_pred eEEEEEcCCCCcccccCcccccCCCCccEEEecCCCCCccCCcccccccccccccccccccCCCCCC-cccccccceecC
Q 006922 67 RVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSGTLPD-FSVWKNLTIINL 145 (625)
Q Consensus 67 ~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~l 145 (625)
+++.|+|++|.+.+. ++..|..+++|++|+|++|.+++..|..|.++++|++|+|++|+++...+. |..+++|++|+|
T Consensus 70 ~L~~L~L~~n~i~~~-~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 148 (390)
T 3o6n_A 70 QVELLNLNDLQIEEI-DTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSM 148 (390)
T ss_dssp CCSEEECTTSCCCEE-CTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred cCcEEECCCCccccc-ChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEEC
Confidence 577899999998864 455699999999999999999998888899999999999999999965554 688999999999
Q ss_pred CCccCCCCCCCCccccccccceeccccccccc
Q 006922 146 SDNGFNGTIPRSLSNLTQLEALYLANNSLSGK 177 (625)
Q Consensus 146 s~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~ 177 (625)
++|++++..|..+..+++|++|++++|++++.
T Consensus 149 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 180 (390)
T 3o6n_A 149 SNNNLERIEDDTFQATTSLQNLQLSSNRLTHV 180 (390)
T ss_dssp CSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC
T ss_pred CCCccCccChhhccCCCCCCEEECCCCcCCcc
Confidence 99999988788899999999999999998753
No 346
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.47 E-value=1.8e-14 Score=147.73 Aligned_cols=146 Identities=21% Similarity=0.180 Sum_probs=99.3
Q ss_pred EEEEEcCCCCcccccCcccccCCCCccEEEecCCCCCccCCcccccccccccccccccccCCCCC-Cc-ccccccceecC
Q 006922 68 VVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSGTLP-DF-SVWKNLTIINL 145 (625)
Q Consensus 68 v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~-~~l~~L~~L~l 145 (625)
+..|++++|.+++.. ...+++|++|+|++|.+++..|..+..+++|++|+|++|++++..+ .+ ..+++|++|+|
T Consensus 101 L~~L~l~~n~l~~~~----~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L 176 (317)
T 3o53_A 101 IETLHAANNNISRVS----CSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNL 176 (317)
T ss_dssp CCEEECCSSCCSEEE----ECCCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEEC
T ss_pred cCEEECCCCccCCcC----ccccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEEC
Confidence 445555666665432 2346778888888888887767777778888888888888876554 33 35777888888
Q ss_pred CCccCCCCCCCCccccccccceecccccccccCCCC-CCCCCcEEEcccCCCccccccccccCCC---CcccCCCCCCC
Q 006922 146 SDNGFNGTIPRSLSNLTQLEALYLANNSLSGKIPDL-NLPNLQQLNLANNNLSGSIPQSLKRFPS---SAFVGNSISFD 220 (625)
Q Consensus 146 s~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~-~l~~L~~L~l~~N~l~g~~p~~l~~~~~---~~~~~n~~~~~ 220 (625)
++|++++. |. ...+++|++|+|++|++++.++.. .+++|+.|+|++|+|+ .+|..+..++. +.+.+|++.|+
T Consensus 177 ~~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~ 252 (317)
T 3o53_A 177 QYNFIYDV-KG-QVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCG 252 (317)
T ss_dssp TTSCCCEE-EC-CCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHH
T ss_pred CCCcCccc-cc-ccccccCCEEECCCCcCCcchhhhcccCcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCc
Confidence 88887744 32 234777888888888887665554 6777888888888887 56666655444 45566776654
No 347
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.47 E-value=7.6e-14 Score=138.98 Aligned_cols=142 Identities=24% Similarity=0.283 Sum_probs=106.2
Q ss_pred eEEEEEcCCCCcccccCcccccCCCCccEEEecCCCCCccCCcccccccccccccccccccCCCCCCcccccccceecCC
Q 006922 67 RVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSGTLPDFSVWKNLTIINLS 146 (625)
Q Consensus 67 ~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~ls 146 (625)
.++.|++.+|+++. ++ .++.+++|+.|+|++|.|++..| +.++++|++|+|++|++++ +|.+.. ++|+.|+|+
T Consensus 42 ~L~~L~l~~n~i~~-l~--~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N~l~~-l~~~~~-~~L~~L~L~ 114 (263)
T 1xeu_A 42 GVQNFNGDNSNIQS-LA--GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVNRNRLKN-LNGIPS-ACLSRLFLD 114 (263)
T ss_dssp TCSEEECTTSCCCC-CT--TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCSSCCSC-CTTCCC-SSCCEEECC
T ss_pred cCcEEECcCCCccc-ch--HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECCCCccCC-cCcccc-CcccEEEcc
Confidence 47778888888874 44 48888899999999998887544 8888889999999998886 444444 888899999
Q ss_pred CccCCCCCCCCccccccccceecccccccccCCCCCCCCCcEEEcccCCCccccccccccCCC---CcccCCCCCC
Q 006922 147 DNGFNGTIPRSLSNLTQLEALYLANNSLSGKIPDLNLPNLQQLNLANNNLSGSIPQSLKRFPS---SAFVGNSISF 219 (625)
Q Consensus 147 ~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~l~~L~~L~l~~N~l~g~~p~~l~~~~~---~~~~~n~~~~ 219 (625)
+|++++. + .+..+++|+.|+|++|++++..+-..+++|+.|+|++|++++. ..+..++. +.+.+|++.+
T Consensus 115 ~N~l~~~-~-~l~~l~~L~~L~Ls~N~i~~~~~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~ 186 (263)
T 1xeu_A 115 NNELRDT-D-SLIHLKNLEILSIRNNKLKSIVMLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVN 186 (263)
T ss_dssp SSCCSBS-G-GGTTCTTCCEEECTTSCCCBCGGGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEEC
T ss_pred CCccCCC-h-hhcCcccccEEECCCCcCCCChHHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccC
Confidence 9988853 3 5888888999999999888753223788888999999988865 44555544 3455565443
No 348
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.47 E-value=5.3e-14 Score=155.31 Aligned_cols=118 Identities=19% Similarity=0.220 Sum_probs=72.4
Q ss_pred EEEEEcCCCCcccccCcccccCCCCccEEEecCCCCCccCCcccccccccccccccccccCCCCCCcccccccceecCCC
Q 006922 68 VVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSGTLPDFSVWKNLTIINLSD 147 (625)
Q Consensus 68 v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~ls~ 147 (625)
+..|+|++|++++ +| . |+.|++|+.|+|++|.|+ .+|..|+++++|+.|+|++|+|++ +|.++.+++|+.|+|++
T Consensus 443 L~~L~Ls~n~l~~-lp-~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp~l~~l~~L~~L~Ls~ 517 (567)
T 1dce_A 443 VRVLHLAHKDLTV-LC-H-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VDGVANLPRLQELLLCN 517 (567)
T ss_dssp CSEEECTTSCCSS-CC-C-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CGGGTTCSSCCEEECCS
T ss_pred ceEEEecCCCCCC-Cc-C-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-CcccCCCCCCcEEECCC
Confidence 4446666666665 43 2 666666666666666666 356666666666666666666665 44666666666666666
Q ss_pred ccCCCCC-CCCccccccccceecccccccccCCCC-----CCCCCcEEE
Q 006922 148 NGFNGTI-PRSLSNLTQLEALYLANNSLSGKIPDL-----NLPNLQQLN 190 (625)
Q Consensus 148 N~l~~~~-p~~l~~l~~L~~L~l~~N~l~~~~p~~-----~l~~L~~L~ 190 (625)
|+|++.. |..++.+++|+.|+|++|.|++.+|.. .+++|+.|+
T Consensus 518 N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~~L~ 566 (567)
T 1dce_A 518 NRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSIL 566 (567)
T ss_dssp SCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEEE
T ss_pred CCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCcccCccC
Confidence 6666554 666666666666666666666655532 255666554
No 349
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.47 E-value=1.4e-13 Score=141.81 Aligned_cols=147 Identities=24% Similarity=0.334 Sum_probs=97.3
Q ss_pred EEEEEcCCCCcccccCcccccCCCCccEEEecCCCCC--ccCCcccccccccccccccccccCCCCCCcccccccceecC
Q 006922 68 VVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVIT--GYFPSDFINLKSLCYLYLQFNNFSGTLPDFSVWKNLTIINL 145 (625)
Q Consensus 68 v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~--~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l 145 (625)
++.|++++|.+.+ +++..+.++++|+.|++++|.+. +..+..+.++++|++|++++|.++.....+. ++|+.|++
T Consensus 123 L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~l~~~~~--~~L~~L~l 199 (330)
T 1xku_A 123 LQELRVHENEITK-VRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQGLP--PSLTELHL 199 (330)
T ss_dssp CCEEECCSSCCCB-BCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCSCCSSCC--TTCSEEEC
T ss_pred ccEEECCCCcccc-cCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccccCCcccc--ccCCEEEC
Confidence 4445555555543 33444667777777777777775 3556667777777777777777764332332 67777788
Q ss_pred CCccCCCCCCCCccccccccceecccccccccCCCC--CCCCCcEEEcccCCCccccccccccCCCC---cccCCCCC
Q 006922 146 SDNGFNGTIPRSLSNLTQLEALYLANNSLSGKIPDL--NLPNLQQLNLANNNLSGSIPQSLKRFPSS---AFVGNSIS 218 (625)
Q Consensus 146 s~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~L~l~~N~l~g~~p~~l~~~~~~---~~~~n~~~ 218 (625)
++|++++..|..+..+++|+.|+|++|.+++..+.. .+++|+.|+|++|+++ .+|..+..++.+ .+.+|.+.
T Consensus 200 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~ 276 (330)
T 1xku_A 200 DGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNIS 276 (330)
T ss_dssp TTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCC
T ss_pred CCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCC
Confidence 888777766777777888888888888887766642 6777888888888887 677766665543 44455543
No 350
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.46 E-value=1.1e-13 Score=128.13 Aligned_cols=103 Identities=27% Similarity=0.362 Sum_probs=74.6
Q ss_pred EEcCCCCcccccCcccccCCCCccEEEecCCCCCccCCcccccccccccccccccccCCCCCC-cccccccceecCCCcc
Q 006922 71 VRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSGTLPD-FSVWKNLTIINLSDNG 149 (625)
Q Consensus 71 l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~ls~N~ 149 (625)
+++++++++. +|.. + .++|++|+|++|.|++..|..|.++++|++|+|++|+|++..+. |..+++|++|+|++|+
T Consensus 14 l~~s~n~l~~-ip~~-~--~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~ 89 (170)
T 3g39_A 14 VDCSGKSLAS-VPTG-I--PTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQ 89 (170)
T ss_dssp EECTTSCCSS-CCSC-C--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEeCCCCcCc-cCcc-C--CCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCc
Confidence 4444555553 5543 3 37888888888888887788888888888888888888866663 5777888888888888
Q ss_pred CCCCCCCCccccccccceeccccccccc
Q 006922 150 FNGTIPRSLSNLTQLEALYLANNSLSGK 177 (625)
Q Consensus 150 l~~~~p~~l~~l~~L~~L~l~~N~l~~~ 177 (625)
|++..+..|..+++|+.|+|++|.++..
T Consensus 90 l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 117 (170)
T 3g39_A 90 LKSIPRGAFDNLKSLTHIWLLNNPWDCA 117 (170)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCBCTT
T ss_pred cCEeCHHHhcCCCCCCEEEeCCCCCCCC
Confidence 8765555677777777777777766643
No 351
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.46 E-value=6.6e-15 Score=167.54 Aligned_cols=138 Identities=24% Similarity=0.295 Sum_probs=117.7
Q ss_pred CeEEEEEcCCCCcccccCcccccCCCCccEEEecCCCCCccCCcccccccccccccccccccCCCCC-Ccccccccceec
Q 006922 66 KRVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSGTLP-DFSVWKNLTIIN 144 (625)
Q Consensus 66 ~~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~ 144 (625)
..+..|+|++|.+. .+|+. +..|++|++|+|++|.|+ .+|..|++|++|++|+|++|+|+ .+| .|+.+++|++|+
T Consensus 224 ~~L~~L~Ls~n~l~-~l~~~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~ 299 (727)
T 4b8c_D 224 QLWHALDLSNLQIF-NISAN-IFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFY 299 (727)
T ss_dssp CCCCEEECTTSCCS-CCCGG-GGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEE
T ss_pred CCCcEEECCCCCCC-CCChh-hcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEE
Confidence 46888999999998 78776 679999999999999999 68999999999999999999999 555 799999999999
Q ss_pred CCCccCCCCCCCCccccccccceecccccccccCCCC--CC-CCCcEEEcccCCCccccccccccCC
Q 006922 145 LSDNGFNGTIPRSLSNLTQLEALYLANNSLSGKIPDL--NL-PNLQQLNLANNNLSGSIPQSLKRFP 208 (625)
Q Consensus 145 ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~--~l-~~L~~L~l~~N~l~g~~p~~l~~~~ 208 (625)
|++|.|+ .+|..|+.+++|+.|+|++|.|++.+|.. .+ ..+..|+|++|.++|.+|..+..+.
T Consensus 300 L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~l~~l~ 365 (727)
T 4b8c_D 300 FFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHERRFIE 365 (727)
T ss_dssp CCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC-----
T ss_pred CCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccccceeE
Confidence 9999998 78999999999999999999999988863 11 1223578999999999998776553
No 352
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.45 E-value=1.3e-13 Score=140.77 Aligned_cols=144 Identities=27% Similarity=0.452 Sum_probs=120.5
Q ss_pred CeEEEEEcCCCCcccccCcccccCCCCccEEEecCCCCCccCCcccccccccccccccccccCCCCCCcccccccceecC
Q 006922 66 KRVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSGTLPDFSVWKNLTIINL 145 (625)
Q Consensus 66 ~~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l 145 (625)
.+++.|+|++|.+.+. + .+..+++|++|+|++|.+++ +| .+..+++|++|+|++|++++..+ +..+++|+.|+|
T Consensus 85 ~~L~~L~L~~n~l~~~-~--~~~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~l 158 (308)
T 1h6u_A 85 TKITELELSGNPLKNV-S--AIAGLQSIKTLDLTSTQITD-VT-PLAGLSNLQVLYLDLNQITNISP-LAGLTNLQYLSI 158 (308)
T ss_dssp CSCCEEECCSCCCSCC-G--GGTTCTTCCEEECTTSCCCC-CG-GGTTCTTCCEEECCSSCCCCCGG-GGGCTTCCEEEC
T ss_pred CCCCEEEccCCcCCCc-h--hhcCCCCCCEEECCCCCCCC-ch-hhcCCCCCCEEECCCCccCcCcc-ccCCCCccEEEc
Confidence 4689999999999863 3 49999999999999999998 44 39999999999999999986544 889999999999
Q ss_pred CCccCCCCCCCCccccccccceecccccccccCCCCCCCCCcEEEcccCCCccccccccccCCC---CcccCCCCCC
Q 006922 146 SDNGFNGTIPRSLSNLTQLEALYLANNSLSGKIPDLNLPNLQQLNLANNNLSGSIPQSLKRFPS---SAFVGNSISF 219 (625)
Q Consensus 146 s~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~l~~L~~L~l~~N~l~g~~p~~l~~~~~---~~~~~n~~~~ 219 (625)
++|++++..+ +..+++|+.|+|++|++++..+-..+++|+.|+|++|++++..| +..++. +.+.+|++.+
T Consensus 159 ~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 159 GNAQVSDLTP--LANLSKLTTLKADDNKISDISPLASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp CSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGGGGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEEC
T ss_pred cCCcCCCChh--hcCCCCCCEEECCCCccCcChhhcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeeec
Confidence 9999996443 89999999999999999976664488999999999999996554 555554 4555666543
No 353
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.45 E-value=1.2e-13 Score=139.70 Aligned_cols=141 Identities=30% Similarity=0.438 Sum_probs=118.9
Q ss_pred eEEEEEcCCCCcccccCcccccCCCCccEEEecCCCCCccCCcccccccccccccccccccCCCCCCcccccccceecCC
Q 006922 67 RVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSGTLPDFSVWKNLTIINLS 146 (625)
Q Consensus 67 ~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~ls 146 (625)
+++.|++.++++... + .+..+++|++|+|++|.+++..+ +.++++|++|+|++|++++ +|.+..+++|++|+|+
T Consensus 47 ~L~~L~l~~~~i~~~-~--~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~~l~~l~~L~~L~L~ 120 (291)
T 1h6t_A 47 SIDQIIANNSDIKSV-Q--GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LSSLKDLKKLKSLSLE 120 (291)
T ss_dssp TCCEEECTTSCCCCC-T--TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GGGGTTCTTCCEEECT
T ss_pred cccEEEccCCCcccC-h--hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-ChhhccCCCCCEEECC
Confidence 478899999998754 3 38999999999999999998544 9999999999999999986 6779999999999999
Q ss_pred CccCCCCCCCCccccccccceecccccccccCCCC-CCCCCcEEEcccCCCccccccccccCCCC---cccCCCCC
Q 006922 147 DNGFNGTIPRSLSNLTQLEALYLANNSLSGKIPDL-NLPNLQQLNLANNNLSGSIPQSLKRFPSS---AFVGNSIS 218 (625)
Q Consensus 147 ~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~-~l~~L~~L~l~~N~l~g~~p~~l~~~~~~---~~~~n~~~ 218 (625)
+|++++. ..+..+++|+.|+|++|++++. +.. .+++|+.|+|++|++++..| +..++.+ .+.+|.+.
T Consensus 121 ~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~ 191 (291)
T 1h6t_A 121 HNGISDI--NGLVHLPQLESLYLGNNKITDI-TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHIS 191 (291)
T ss_dssp TSCCCCC--GGGGGCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC
T ss_pred CCcCCCC--hhhcCCCCCCEEEccCCcCCcc-hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCC
Confidence 9999863 4688999999999999999976 443 78999999999999997655 6666554 45556543
No 354
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.45 E-value=2.8e-14 Score=146.21 Aligned_cols=143 Identities=17% Similarity=0.132 Sum_probs=116.7
Q ss_pred CeEEEEEcCCCCcccccCcccccCCCCccEEEecCCCCCccCCcccccccccccccccccccCCCCC-Ccccccccceec
Q 006922 66 KRVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSGTLP-DFSVWKNLTIIN 144 (625)
Q Consensus 66 ~~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~ 144 (625)
..++.|+|++|.+++. ...++|++|++++|.+++..+. .+++|++|+|++|++++..+ .+..+++|++|+
T Consensus 80 ~~L~~L~Ls~n~l~~l------~~~~~L~~L~l~~n~l~~~~~~---~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ 150 (317)
T 3o53_A 80 STLRTLDLNNNYVQEL------LVGPSIETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLD 150 (317)
T ss_dssp TTCCEEECCSSEEEEE------EECTTCCEEECCSSCCSEEEEC---CCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEE
T ss_pred CCCCEEECcCCccccc------cCCCCcCEEECCCCccCCcCcc---ccCCCCEEECCCCCCCCccchhhhccCCCCEEE
Confidence 4688899999998853 2348999999999999986544 36789999999999998777 688899999999
Q ss_pred CCCccCCCCCCCCc-cccccccceecccccccccCCCCCCCCCcEEEcccCCCccccccccccCCC---CcccCCCCC
Q 006922 145 LSDNGFNGTIPRSL-SNLTQLEALYLANNSLSGKIPDLNLPNLQQLNLANNNLSGSIPQSLKRFPS---SAFVGNSIS 218 (625)
Q Consensus 145 ls~N~l~~~~p~~l-~~l~~L~~L~l~~N~l~~~~p~~~l~~L~~L~l~~N~l~g~~p~~l~~~~~---~~~~~n~~~ 218 (625)
|++|++++..+..+ ..+++|++|+|++|.+++..+...+++|+.|+|++|++++ +|..+..++. +.+.+|.+.
T Consensus 151 Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~L~~N~l~ 227 (317)
T 3o53_A 151 LKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKGQVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLV 227 (317)
T ss_dssp CTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEECCCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCC
T ss_pred CCCCCCCcccHHHHhhccCcCCEEECCCCcCcccccccccccCCEEECCCCcCCc-chhhhcccCcccEEECcCCccc
Confidence 99999998777776 4789999999999999977555578999999999999995 5555666554 455566554
No 355
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.45 E-value=3.4e-14 Score=147.93 Aligned_cols=151 Identities=21% Similarity=0.245 Sum_probs=125.5
Q ss_pred CeEEEEEcCCCCcccccCcccccCCCCccEEEecCCCCCccCCcccccccccccccccccccCCCCC--Cccccccccee
Q 006922 66 KRVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSGTLP--DFSVWKNLTII 143 (625)
Q Consensus 66 ~~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p--~~~~l~~L~~L 143 (625)
..++.|+|++|.+++.. +..|+++++|++|+|++|.+++..+..|.++++|++|+|++|++++..+ .+..+++|++|
T Consensus 76 ~~L~~L~L~~n~l~~~~-~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L 154 (353)
T 2z80_A 76 VNLQALVLTSNGINTIE-EDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQIL 154 (353)
T ss_dssp TTCCEEECTTSCCCEEC-TTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEE
T ss_pred CCCCEEECCCCccCccC-HhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEE
Confidence 46889999999999754 4569999999999999999998655559999999999999999996554 58899999999
Q ss_pred cCCCc-cCCCCCCCCccccccccceecccccccccCCCC--CCCCCcEEEcccCCCccccccc----cccCCCCcccCCC
Q 006922 144 NLSDN-GFNGTIPRSLSNLTQLEALYLANNSLSGKIPDL--NLPNLQQLNLANNNLSGSIPQS----LKRFPSSAFVGNS 216 (625)
Q Consensus 144 ~ls~N-~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~L~l~~N~l~g~~p~~----l~~~~~~~~~~n~ 216 (625)
++++| .+++..+..+..+++|++|++++|++++..|.. .+++|+.|++++|+++ .+|.. +.++..+.+.+|.
T Consensus 155 ~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~-~~~~~~~~~~~~L~~L~L~~n~ 233 (353)
T 2z80_A 155 RVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHI-LLLEIFVDVTSSVECLELRDTD 233 (353)
T ss_dssp EEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCST-THHHHHHHHTTTEEEEEEESCB
T ss_pred ECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccc-cchhhhhhhcccccEEECCCCc
Confidence 99999 577666788999999999999999999987764 7899999999999996 45543 2344445666665
Q ss_pred CC
Q 006922 217 IS 218 (625)
Q Consensus 217 ~~ 218 (625)
+.
T Consensus 234 l~ 235 (353)
T 2z80_A 234 LD 235 (353)
T ss_dssp CT
T ss_pred cc
Confidence 44
No 356
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.45 E-value=1.3e-13 Score=153.14 Aligned_cols=143 Identities=27% Similarity=0.375 Sum_probs=119.0
Q ss_pred CeEEEEEcCCCCcccccCcccccCCCCccEEEecCCCCCccCCcccccccccccccccccccCCCCCCcccccccceecC
Q 006922 66 KRVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSGTLPDFSVWKNLTIINL 145 (625)
Q Consensus 66 ~~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l 145 (625)
..+..|+|++|.+.+..+ +..|++|+.|+|++|.|++ +| .+..+++|+.|+|++|++++ ++.+..+++|+.|+|
T Consensus 65 ~~L~~L~Ls~N~l~~~~~---l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~-l~~l~~l~~L~~L~L 138 (605)
T 1m9s_A 65 PNVTKLFLNGNKLTDIKP---LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLSLEHNGISD-INGLVHLPQLESLYL 138 (605)
T ss_dssp TTCCEEECTTSCCCCCGG---GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEECTTSCCCC-CGGGGGCTTCSEEEC
T ss_pred CCCCEEEeeCCCCCCChh---hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEEecCCCCCC-CccccCCCccCEEEC
Confidence 358889999999987543 8999999999999999997 44 78999999999999999985 578899999999999
Q ss_pred CCccCCCCCCCCccccccccceecccccccccCCCCCCCCCcEEEcccCCCccccccccccCCC---CcccCCCCC
Q 006922 146 SDNGFNGTIPRSLSNLTQLEALYLANNSLSGKIPDLNLPNLQQLNLANNNLSGSIPQSLKRFPS---SAFVGNSIS 218 (625)
Q Consensus 146 s~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~l~~L~~L~l~~N~l~g~~p~~l~~~~~---~~~~~n~~~ 218 (625)
++|+|++. ..+..+++|+.|+|++|.|++.+|-..+++|+.|+|++|+|++ +| .+..++. +.+.+|++.
T Consensus 139 s~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~l~~l~~L~~L~Ls~N~i~~-l~-~l~~l~~L~~L~L~~N~l~ 210 (605)
T 1m9s_A 139 GNNKITDI--TVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELFSQECL 210 (605)
T ss_dssp CSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEECCSEEEE
T ss_pred CCCccCCc--hhhcccCCCCEEECcCCcCCCchhhccCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEccCCcCc
Confidence 99999865 5788999999999999999988775588999999999999986 34 4555554 445555543
No 357
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.44 E-value=4.1e-14 Score=155.29 Aligned_cols=139 Identities=26% Similarity=0.281 Sum_probs=117.8
Q ss_pred CeEEEEEcCCCCcccccCcccccCCCCccEEEecCCCCCccCCcccccccccccccccccccCCCCCCcccccccceecC
Q 006922 66 KRVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSGTLPDFSVWKNLTIINL 145 (625)
Q Consensus 66 ~~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l 145 (625)
.+++.|+|++|.+.+. ++..|.++++|++|+|++|.+++..|..|.++++|++|+|++|+++ .+|.. .+++|++|+|
T Consensus 21 ~~L~~L~Ls~n~i~~~-~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~-~l~~L~~L~L 97 (520)
T 2z7x_B 21 QKTTILNISQNYISEL-WTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCH-PTVNLKHLDL 97 (520)
T ss_dssp TTCSEEECCSSCCCCC-CHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECC-CCCCCSEEEC
T ss_pred ccccEEECCCCccccc-ChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCcc-ccCCccEEec
Confidence 4688899999999864 4456999999999999999999988889999999999999999998 46654 8899999999
Q ss_pred CCccCCC-CCCCCccccccccceecccccccccCCCCCCCCC--cEEEcccCCC--ccccccccccCC
Q 006922 146 SDNGFNG-TIPRSLSNLTQLEALYLANNSLSGKIPDLNLPNL--QQLNLANNNL--SGSIPQSLKRFP 208 (625)
Q Consensus 146 s~N~l~~-~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~l~~L--~~L~l~~N~l--~g~~p~~l~~~~ 208 (625)
++|++++ .+|..++.+++|++|+|++|++++. .-..+++| +.|++++|++ ++.+|..+..+.
T Consensus 98 ~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~-~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~ 164 (520)
T 2z7x_B 98 SFNAFDALPICKEFGNMSQLKFLGLSTTHLEKS-SVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFN 164 (520)
T ss_dssp CSSCCSSCCCCGGGGGCTTCCEEEEEESSCCGG-GGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCC
T ss_pred cCCccccccchhhhccCCcceEEEecCcccchh-hccccccceeeEEEeecccccccccccccccccc
Confidence 9999987 5788999999999999999999862 11256677 9999999999 888888877765
No 358
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.44 E-value=2.8e-13 Score=125.40 Aligned_cols=106 Identities=24% Similarity=0.277 Sum_probs=94.0
Q ss_pred ccEEEecCCCCCccCCcccccccccccccccccccCCCCC-CcccccccceecCCCccCCCCCCCCccccccccceeccc
Q 006922 93 LKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSGTLP-DFSVWKNLTIINLSDNGFNGTIPRSLSNLTQLEALYLAN 171 (625)
Q Consensus 93 L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~ls~N~l~~~~p~~l~~l~~L~~L~l~~ 171 (625)
.+.|++++|.|+. +|..+. ++|++|+|++|+|++..| .|..+++|++|+|++|+|++..+..|..+++|++|+|++
T Consensus 11 ~~~l~~s~n~l~~-ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLAS-VPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcCc-cCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 4789999999997 776663 899999999999998877 589999999999999999977777789999999999999
Q ss_pred ccccccCCC-C-CCCCCcEEEcccCCCccccc
Q 006922 172 NSLSGKIPD-L-NLPNLQQLNLANNNLSGSIP 201 (625)
Q Consensus 172 N~l~~~~p~-~-~l~~L~~L~l~~N~l~g~~p 201 (625)
|+|++..+. + .+++|+.|+|++|+++...+
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 999987775 3 78999999999999986544
No 359
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.44 E-value=5.8e-16 Score=147.44 Aligned_cols=142 Identities=29% Similarity=0.372 Sum_probs=117.6
Q ss_pred eEEEEEcCCCCcccccCc-----ccccCCCCccEEEecCCCCCccCCcccccccccccccccccccCCCCC-Cccccccc
Q 006922 67 RVVAVRLPGVGFSGLIPP-----NTISRLSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSGTLP-DFSVWKNL 140 (625)
Q Consensus 67 ~v~~l~l~~~~l~g~~~~-----~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L 140 (625)
.++.+++..+.+.|.+|+ ..++.+++|++|+|++|.+++ +| .+.++++|++|+|++|+++. +| .+..+++|
T Consensus 19 ~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~~-l~~~~~~~~~L 95 (198)
T 1ds9_A 19 SVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIKK-IENLDAVADTL 95 (198)
T ss_dssp CCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEECS-CSSHHHHHHHC
T ss_pred cccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCccc-ccchhhcCCcC
Confidence 455666777777777664 248999999999999999998 67 89999999999999999994 55 46667999
Q ss_pred ceecCCCccCCCCCCCCccccccccceecccccccccCC--C-CCCCCCcEEEcccCCCccccccc----------cccC
Q 006922 141 TIINLSDNGFNGTIPRSLSNLTQLEALYLANNSLSGKIP--D-LNLPNLQQLNLANNNLSGSIPQS----------LKRF 207 (625)
Q Consensus 141 ~~L~ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p--~-~~l~~L~~L~l~~N~l~g~~p~~----------l~~~ 207 (625)
++|+|++|++++ +| .+..+++|+.|+|++|++++..+ . ..+++|+.|++++|++++.+|.. +..+
T Consensus 96 ~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~l 173 (198)
T 1ds9_A 96 EELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRL 173 (198)
T ss_dssp SEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHHC
T ss_pred CEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHHhC
Confidence 999999999996 55 68899999999999999986433 2 37899999999999999887763 6777
Q ss_pred CCCccc
Q 006922 208 PSSAFV 213 (625)
Q Consensus 208 ~~~~~~ 213 (625)
+.+...
T Consensus 174 ~~L~~L 179 (198)
T 1ds9_A 174 PNLKKL 179 (198)
T ss_dssp SSCSEE
T ss_pred CCcEEE
Confidence 776543
No 360
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.43 E-value=2e-13 Score=142.00 Aligned_cols=99 Identities=20% Similarity=0.280 Sum_probs=64.1
Q ss_pred CCCCCCCceEeCCCC---------CeEEEEEcCCCCcccccCcccccCCCCccEEEecCCCCCccCCc-cccccccccc-
Q 006922 51 SVCNHWTGVKCSEDG---------KRVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPS-DFINLKSLCY- 119 (625)
Q Consensus 51 ~~c~~w~gv~C~~~~---------~~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~~~p~-~~~~l~~L~~- 119 (625)
|.| .|..|.|++.+ ..++.|+|++|+++ .+|++.|.+|++|++|+|++|.+.+.+|. .|.++++|.+
T Consensus 7 C~C-~~~~v~C~~~~Lt~iP~~l~~~l~~L~Ls~N~i~-~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~ 84 (350)
T 4ay9_X 7 CHC-SNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLR-VIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEI 84 (350)
T ss_dssp SEE-ETTEEEEESTTCCSCCTTCCTTCSEEEEESCCCS-EECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEE
T ss_pred cEe-eCCEEEecCCCCCccCcCcCCCCCEEEccCCcCC-CcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhh
Confidence 455 79999998642 35788999999998 57877899999999999999998664443 3455544432
Q ss_pred ccccccccCCCCC-CcccccccceecCCCccCC
Q 006922 120 LYLQFNNFSGTLP-DFSVWKNLTIINLSDNGFN 151 (625)
Q Consensus 120 L~L~~N~l~~~~p-~~~~l~~L~~L~ls~N~l~ 151 (625)
++++.|+++...| .|..+++|++|++++|+|+
T Consensus 85 l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~ 117 (350)
T 4ay9_X 85 RIEKANNLLYINPEAFQNLPNLQYLLISNTGIK 117 (350)
T ss_dssp EEEEETTCCEECTTSBCCCTTCCEEEEEEECCS
T ss_pred hcccCCcccccCchhhhhccccccccccccccc
Confidence 3334444443333 2444444444444444443
No 361
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.43 E-value=1.9e-13 Score=127.34 Aligned_cols=113 Identities=23% Similarity=0.329 Sum_probs=100.3
Q ss_pred CeEEEEEcCCCCcccccCcccccCCCCccEEEecCCCCCccCCcccccccccccccccccccCCCCCC-cccccccceec
Q 006922 66 KRVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSGTLPD-FSVWKNLTIIN 144 (625)
Q Consensus 66 ~~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~ 144 (625)
..++.|+|++|++.+ +++..|+.+++|++|+|++|.|++..+..|.++++|++|+|++|++++.++. +..+++|++|+
T Consensus 28 ~~l~~L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ 106 (177)
T 2o6r_A 28 SSATRLELESNKLQS-LPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELA 106 (177)
T ss_dssp TTCSEEECCSSCCCC-CCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCcEEEeCCCcccE-eCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEE
Confidence 358899999999985 5666689999999999999999987777789999999999999999987774 78999999999
Q ss_pred CCCccCCCCCCCCccccccccceecccccccccCC
Q 006922 145 LSDNGFNGTIPRSLSNLTQLEALYLANNSLSGKIP 179 (625)
Q Consensus 145 ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p 179 (625)
|++|+|++..+..+..+++|++|+|++|.+++..|
T Consensus 107 l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 107 LDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 99999996666667899999999999999987655
No 362
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.43 E-value=4.9e-13 Score=124.25 Aligned_cols=104 Identities=27% Similarity=0.379 Sum_probs=80.1
Q ss_pred EEEcCCCCcccccCcccccCCCCccEEEecCCCCCccCCcccccccccccccccccccCCCCCC-cccccccceecCCCc
Q 006922 70 AVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSGTLPD-FSVWKNLTIINLSDN 148 (625)
Q Consensus 70 ~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~ls~N 148 (625)
.++++++++. .+|.. +. ++|++|+|++|.|++..|..|.++++|++|+|++|+|++.++. |..+++|++|+|++|
T Consensus 16 ~l~~~~n~l~-~iP~~-~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 16 LVNCQNIRLA-SVPAG-IP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp EEECCSSCCS-SCCSC-CC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred EEEeCCCCCC-ccCCC-cC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 4677777774 56654 43 7889999999999988888888888888888888888876654 577888888888888
Q ss_pred cCCCCCCCCccccccccceeccccccccc
Q 006922 149 GFNGTIPRSLSNLTQLEALYLANNSLSGK 177 (625)
Q Consensus 149 ~l~~~~p~~l~~l~~L~~L~l~~N~l~~~ 177 (625)
+|++..+..|..+++|+.|+|++|.++..
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c~ 120 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDCE 120 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCTT
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcccc
Confidence 88855555577777777777777777643
No 363
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.41 E-value=8.7e-14 Score=129.63 Aligned_cols=125 Identities=20% Similarity=0.280 Sum_probs=90.4
Q ss_pred eEEEEEcCCCCcccccCcccccCCC-CccEEEecCCCCCccCCcccccccccccccccccccCCCCCCc-ccccccceec
Q 006922 67 RVVAVRLPGVGFSGLIPPNTISRLS-ALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSGTLPDF-SVWKNLTIIN 144 (625)
Q Consensus 67 ~v~~l~l~~~~l~g~~~~~~~~~l~-~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~-~~l~~L~~L~ 144 (625)
.++.|+|++|+++. ++ . +..+. +|++|+|++|.|++. ..|..+++|++|+|++|++++..+.+ ..+++|++|+
T Consensus 20 ~L~~L~l~~n~l~~-i~-~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 94 (176)
T 1a9n_A 20 RDRELDLRGYKIPV-IE-N-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELI 94 (176)
T ss_dssp SCEEEECTTSCCCS-CC-C-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEE
T ss_pred CceEEEeeCCCCch-hH-H-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEE
Confidence 47778888888774 43 2 44444 888888888888875 46778888888888888887655553 7778888888
Q ss_pred CCCccCCCCCCC--CccccccccceecccccccccCCC----C-CCCCCcEEEcccCCCc
Q 006922 145 LSDNGFNGTIPR--SLSNLTQLEALYLANNSLSGKIPD----L-NLPNLQQLNLANNNLS 197 (625)
Q Consensus 145 ls~N~l~~~~p~--~l~~l~~L~~L~l~~N~l~~~~p~----~-~l~~L~~L~l~~N~l~ 197 (625)
|++|+|+ .+|. .+..+++|+.|++++|.++...+. . .+++|+.|++++|.+.
T Consensus 95 L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 95 LTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred CCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCCcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 8888885 4555 677778888888888888754332 2 6778888888888765
No 364
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.40 E-value=8.3e-13 Score=122.70 Aligned_cols=103 Identities=22% Similarity=0.282 Sum_probs=91.2
Q ss_pred cEEEecCCCCCccCCcccccccccccccccccccCCCCC-CcccccccceecCCCccCCCCCCCCccccccccceecccc
Q 006922 94 KILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSGTLP-DFSVWKNLTIINLSDNGFNGTIPRSLSNLTQLEALYLANN 172 (625)
Q Consensus 94 ~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~ls~N~l~~~~p~~l~~l~~L~~L~l~~N 172 (625)
+.+++++|.++. +|..+. ++|+.|+|++|+|++.+| .|..+++|++|+|++|+|++..+..|..+++|++|+|++|
T Consensus 15 ~~l~~~~n~l~~-iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLAS-VPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCCc-cCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 689999999975 777664 899999999999998877 6899999999999999999766666799999999999999
Q ss_pred cccccCCC-C-CCCCCcEEEcccCCCccc
Q 006922 173 SLSGKIPD-L-NLPNLQQLNLANNNLSGS 199 (625)
Q Consensus 173 ~l~~~~p~-~-~l~~L~~L~l~~N~l~g~ 199 (625)
+|++.++. + .+++|+.|+|++|+++..
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c~ 120 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDCE 120 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCTT
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcccc
Confidence 99987775 3 789999999999999843
No 365
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.39 E-value=3.4e-13 Score=139.80 Aligned_cols=145 Identities=23% Similarity=0.314 Sum_probs=103.5
Q ss_pred CeEEEEEcCCCCcccccCcccccCCCCccEEEecCCCCCccCCcccccccccccccccccccCCCCCCcccccccceecC
Q 006922 66 KRVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSGTLPDFSVWKNLTIINL 145 (625)
Q Consensus 66 ~~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l 145 (625)
..+..|++++|.+.+. ++ +..+++|+.|++++|.+.+..+ +..+++|++|+|++|++++..+ +..+++|++|++
T Consensus 177 ~~L~~L~l~~n~l~~~-~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l 250 (347)
T 4fmz_A 177 TDLYSLSLNYNQIEDI-SP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP-LANLSQLTWLEI 250 (347)
T ss_dssp TTCSEEECTTSCCCCC-GG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEEC
T ss_pred CCCCEEEccCCccccc-cc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc-hhcCCCCCEEEC
Confidence 3577888888888753 22 7778888888888888876443 7778888888888888875444 777788888888
Q ss_pred CCccCCCCCCCCccccccccceecccccccccCCCC-CCCCCcEEEcccCCCccccccccccCCC---CcccCCCCCC
Q 006922 146 SDNGFNGTIPRSLSNLTQLEALYLANNSLSGKIPDL-NLPNLQQLNLANNNLSGSIPQSLKRFPS---SAFVGNSISF 219 (625)
Q Consensus 146 s~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~-~l~~L~~L~l~~N~l~g~~p~~l~~~~~---~~~~~n~~~~ 219 (625)
++|.+++. ..+..+++|+.|++++|++++. +.. .+++|+.|++++|++++..|..+..++. +.+.+|.+..
T Consensus 251 ~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~ 325 (347)
T 4fmz_A 251 GTNQISDI--NAVKDLTKLKMLNVGSNQISDI-SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITD 325 (347)
T ss_dssp CSSCCCCC--GGGTTCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCC
T ss_pred CCCccCCC--hhHhcCCCcCEEEccCCccCCC-hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCcccc
Confidence 88887753 3577777888888888887764 332 6777888888888887777766665554 3445555443
No 366
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.39 E-value=8.1e-13 Score=145.32 Aligned_cols=117 Identities=26% Similarity=0.395 Sum_probs=76.1
Q ss_pred eEEEEEcCCCCcccccCcccccCCCCccEEEecCCCCCccCCcccccccccccccccccccCCCCCCcccccccceecCC
Q 006922 67 RVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSGTLPDFSVWKNLTIINLS 146 (625)
Q Consensus 67 ~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~ls 146 (625)
.++.|+|++|.++ .+| +.+++|++|+|++|.|++ +|. +.+ +|++|+|++|+|++ +|. .+++|+.|+|+
T Consensus 81 ~L~~L~Ls~N~l~-~ip----~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~--~l~~L~~L~Ls 148 (571)
T 3cvr_A 81 QITVLEITQNALI-SLP----ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE--LPALLEYINAD 148 (571)
T ss_dssp TCSEEECCSSCCS-CCC----CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC--CCTTCCEEECC
T ss_pred CCCEEECcCCCCc-ccc----cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC--cCccccEEeCC
Confidence 4677777777777 455 346777777777777776 555 554 77777777777776 444 56677777777
Q ss_pred CccCCCCCCCCccccccccceecccccccccCCCCCCCCCcEEEcccCCCcccccc
Q 006922 147 DNGFNGTIPRSLSNLTQLEALYLANNSLSGKIPDLNLPNLQQLNLANNNLSGSIPQ 202 (625)
Q Consensus 147 ~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~l~~L~~L~l~~N~l~g~~p~ 202 (625)
+|+|++ +|. .+++|+.|+|++|+|++ +|... ++|+.|+|++|+|+ .+|.
T Consensus 149 ~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~l~-~~L~~L~Ls~N~L~-~lp~ 197 (571)
T 3cvr_A 149 NNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPELP-ESLEALDVSTNLLE-SLPA 197 (571)
T ss_dssp SSCCSC-CCC---CCTTCCEEECCSSCCSC-CCCCC-TTCCEEECCSSCCS-SCCC
T ss_pred CCccCc-CCC---cCCCcCEEECCCCCCCC-cchhh-CCCCEEECcCCCCC-chhh
Confidence 777764 454 35566667777776665 33333 56666666666666 4554
No 367
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.39 E-value=1.9e-13 Score=127.27 Aligned_cols=124 Identities=18% Similarity=0.156 Sum_probs=102.4
Q ss_pred cccCCCCccEEEecCCCCCccCCccccccc-ccccccccccccCCCCCCcccccccceecCCCccCCCCCCCCccccccc
Q 006922 86 TISRLSALKILSLRSNVITGYFPSDFINLK-SLCYLYLQFNNFSGTLPDFSVWKNLTIINLSDNGFNGTIPRSLSNLTQL 164 (625)
Q Consensus 86 ~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~~~l~~L~~L~ls~N~l~~~~p~~l~~l~~L 164 (625)
.+.++.+|+.|+|++|.++. +|. +..+. +|++|+|++|.+++. +.+..+++|++|+|++|+|++..+..+..+++|
T Consensus 14 ~~~~~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~-~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 90 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL-DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDL 90 (176)
T ss_dssp EEECTTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE-CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTC
T ss_pred hcCCcCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc-cccccCCCCCEEECCCCcccccCcchhhcCCCC
Confidence 37788999999999999996 454 66665 999999999999975 889999999999999999996544445999999
Q ss_pred cceecccccccccCC--CC-CCCCCcEEEcccCCCccccccc----cccCCCCccc
Q 006922 165 EALYLANNSLSGKIP--DL-NLPNLQQLNLANNNLSGSIPQS----LKRFPSSAFV 213 (625)
Q Consensus 165 ~~L~l~~N~l~~~~p--~~-~l~~L~~L~l~~N~l~g~~p~~----l~~~~~~~~~ 213 (625)
++|+|++|+++...+ .. .+++|+.|++++|+++ .+|.. +..++.+...
T Consensus 91 ~~L~L~~N~i~~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~L 145 (176)
T 1a9n_A 91 TELILTNNSLVELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVL 145 (176)
T ss_dssp CEEECCSCCCCCGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEE
T ss_pred CEEECCCCcCCcchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCcccee
Confidence 999999999975433 22 7899999999999998 56664 7777766544
No 368
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.39 E-value=5.1e-13 Score=138.58 Aligned_cols=113 Identities=19% Similarity=0.252 Sum_probs=89.4
Q ss_pred CCCC-CCCCCCceEeCCCCCeEEEEEcCCCCcccccCcccccCCCCccEEEecC-CCCCccCCccccccccccccccccc
Q 006922 48 ESTS-VCNHWTGVKCSEDGKRVVAVRLPGVGFSGLIPPNTISRLSALKILSLRS-NVITGYFPSDFINLKSLCYLYLQFN 125 (625)
Q Consensus 48 ~~~~-~c~~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~-N~l~~~~p~~~~~l~~L~~L~L~~N 125 (625)
+..| .| .|.+|.|++. |+|++ +|+ |..+++|+.|+|++ |.|++..|..|.+|++|+.|+|++|
T Consensus 2 p~~c~~C-~~~~v~~~~~-----------n~l~~-ip~--l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N 66 (347)
T 2ifg_A 2 PDACCPH-GSSGLRCTRD-----------GALDS-LHH--LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKS 66 (347)
T ss_dssp CSSSCCS-SSSCEECCSS-----------CCCTT-TTT--SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSS
T ss_pred CCcCccc-cCCEEEcCCC-----------CCCCc-cCC--CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCC
Confidence 4455 56 6888888652 14553 665 89999999999996 9999988888999999999999999
Q ss_pred ccCCCCC-CcccccccceecCCCccCCCCCCCCccccccccceecccccccc
Q 006922 126 NFSGTLP-DFSVWKNLTIINLSDNGFNGTIPRSLSNLTQLEALYLANNSLSG 176 (625)
Q Consensus 126 ~l~~~~p-~~~~l~~L~~L~ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~ 176 (625)
+|++.+| .|..+++|+.|+|++|+|++..+..+..++ |+.|+|++|.+..
T Consensus 67 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 67 GLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPLHC 117 (347)
T ss_dssp CCCEECTTGGGSCSCCCEEECCSSCCSCCCSTTTCSCC-CCEEECCSSCCCC
T ss_pred ccceeCHHHhcCCcCCCEEeCCCCccceeCHHHcccCC-ceEEEeeCCCccC
Confidence 9998777 578899999999999999865555555554 8888888887763
No 369
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.39 E-value=4.7e-13 Score=148.71 Aligned_cols=141 Identities=30% Similarity=0.444 Sum_probs=119.3
Q ss_pred eEEEEEcCCCCcccccCcccccCCCCccEEEecCCCCCccCCcccccccccccccccccccCCCCCCcccccccceecCC
Q 006922 67 RVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSGTLPDFSVWKNLTIINLS 146 (625)
Q Consensus 67 ~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~ls 146 (625)
.+..|+|+++++.. ++ .|..|++|+.|+|++|.|++..| +..+++|+.|+|++|++++ +|.+..+++|+.|+|+
T Consensus 44 ~L~~L~l~~n~i~~-l~--~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~~l~~l~~L~~L~Ls 117 (605)
T 1m9s_A 44 SIDQIIANNSDIKS-VQ--GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LSSLKDLKKLKSLSLE 117 (605)
T ss_dssp TCCCCBCTTCCCCC-CT--TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CTTSTTCTTCCEEECT
T ss_pred CCCEEECcCCCCCC-Ch--HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-ChhhccCCCCCEEEec
Confidence 46778898888875 34 38999999999999999998554 9999999999999999985 6789999999999999
Q ss_pred CccCCCCCCCCccccccccceecccccccccCCCC-CCCCCcEEEcccCCCccccccccccCCC---CcccCCCCC
Q 006922 147 DNGFNGTIPRSLSNLTQLEALYLANNSLSGKIPDL-NLPNLQQLNLANNNLSGSIPQSLKRFPS---SAFVGNSIS 218 (625)
Q Consensus 147 ~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~-~l~~L~~L~l~~N~l~g~~p~~l~~~~~---~~~~~n~~~ 218 (625)
+|+|++. ..+..+++|+.|+|++|+|++. +.. .+++|+.|+|++|+|++..| +..++. +.+.+|.+.
T Consensus 118 ~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l-~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~ 188 (605)
T 1m9s_A 118 HNGISDI--NGLVHLPQLESLYLGNNKITDI-TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHIS 188 (605)
T ss_dssp TSCCCCC--GGGGGCTTCSEEECCSSCCCCC-GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC
T ss_pred CCCCCCC--ccccCCCccCEEECCCCccCCc-hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCC
Confidence 9999863 4689999999999999999976 443 89999999999999997766 666555 455566544
No 370
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.39 E-value=8.3e-13 Score=142.24 Aligned_cols=138 Identities=20% Similarity=0.163 Sum_probs=87.8
Q ss_pred eEEEEEcCCCCcccccCcccccCCCCccEEEecCCCCCccCCcccccccccccccccccccCCCCCCcccccccceecCC
Q 006922 67 RVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSGTLPDFSVWKNLTIINLS 146 (625)
Q Consensus 67 ~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~ls 146 (625)
.++.|++.+|...+.++ ++.+++|+.|++++|.+++ +| +..+++|+.|++++|++++. .++.+++|+.|+++
T Consensus 149 ~L~~L~l~~n~~~~~~~---~~~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~--~l~~l~~L~~L~Ls 220 (457)
T 3bz5_A 149 QLTELDCHLNKKITKLD---VTPQTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL--DLNQNIQLTFLDCS 220 (457)
T ss_dssp TCCEEECTTCSCCCCCC---CTTCTTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC--CCTTCTTCSEEECC
T ss_pred cCCEEECCCCCcccccc---cccCCcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee--ccccCCCCCEEECc
Confidence 46677777776666652 6777777777777777776 44 66777777777777777754 36667777777777
Q ss_pred CccCCCCCCCCccccccccceecccccccccCCCCCCC----------CCcEEEcccCCCcccccc-ccccCCCCcccCC
Q 006922 147 DNGFNGTIPRSLSNLTQLEALYLANNSLSGKIPDLNLP----------NLQQLNLANNNLSGSIPQ-SLKRFPSSAFVGN 215 (625)
Q Consensus 147 ~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~l~----------~L~~L~l~~N~l~g~~p~-~l~~~~~~~~~~n 215 (625)
+|++++ +| +..+++|+.|++++|++++..+. .++ +|+.|++++|.+.|.+|. .+.++..+.+.+|
T Consensus 221 ~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~~-~l~~L~~L~l~~n~L~~L~l~~n~~~~~~~~~~l~~L~~L~Ls~n 296 (457)
T 3bz5_A 221 SNKLTE-ID--VTPLTQLTYFDCSVNPLTELDVS-TLSKLTTLHCIQTDLLEIDLTHNTQLIYFQAEGCRKIKELDVTHN 296 (457)
T ss_dssp SSCCSC-CC--CTTCTTCSEEECCSSCCSCCCCT-TCTTCCEEECTTCCCSCCCCTTCTTCCEEECTTCTTCCCCCCTTC
T ss_pred CCcccc-cC--ccccCCCCEEEeeCCcCCCcCHH-HCCCCCEEeccCCCCCEEECCCCccCCcccccccccCCEEECCCC
Confidence 777775 45 66777777777777777765432 222 344555555555555552 1233333444444
Q ss_pred C
Q 006922 216 S 216 (625)
Q Consensus 216 ~ 216 (625)
.
T Consensus 297 ~ 297 (457)
T 3bz5_A 297 T 297 (457)
T ss_dssp T
T ss_pred c
Confidence 3
No 371
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.38 E-value=6.3e-13 Score=143.77 Aligned_cols=124 Identities=31% Similarity=0.385 Sum_probs=74.3
Q ss_pred eEEEEEcCCCCcccccCcccccCCCCccEEEecCCCCCccCCcccccccccccccccccccCCCCCCcccccccceecCC
Q 006922 67 RVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSGTLPDFSVWKNLTIINLS 146 (625)
Q Consensus 67 ~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~ls 146 (625)
.+..|++.+|.+.+. + .+..+++|+.|++++|.+++..| +..+++|++|+|++|.+++..+ +..+++|+.|+|+
T Consensus 222 ~L~~L~l~~n~l~~~--~-~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~L~ 295 (466)
T 1o6v_A 222 NLDELSLNGNQLKDI--G-TLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP-LAGLTALTNLELN 295 (466)
T ss_dssp TCCEEECCSSCCCCC--G-GGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG-GTTCTTCSEEECC
T ss_pred CCCEEECCCCCcccc--h-hhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc-ccCCCccCeEEcC
Confidence 466667777666642 1 36666666666666666665433 6666666666666666665433 5566666666666
Q ss_pred CccCCCCCCCCccccccccceecccccccccCCCCCCCCCcEEEcccCCCcc
Q 006922 147 DNGFNGTIPRSLSNLTQLEALYLANNSLSGKIPDLNLPNLQQLNLANNNLSG 198 (625)
Q Consensus 147 ~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~l~~L~~L~l~~N~l~g 198 (625)
+|++++..+ +..+++|+.|+|++|++++..|...+++|+.|++++|++++
T Consensus 296 ~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~l~~n~l~~ 345 (466)
T 1o6v_A 296 ENQLEDISP--ISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSD 345 (466)
T ss_dssp SSCCSCCGG--GGGCTTCSEEECCSSCCSCCGGGGGCTTCCEEECCSSCCCC
T ss_pred CCcccCchh--hcCCCCCCEEECcCCcCCCchhhccCccCCEeECCCCccCC
Confidence 666664333 55566666666666666655543355556666666666554
No 372
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.38 E-value=5.2e-13 Score=144.40 Aligned_cols=144 Identities=29% Similarity=0.380 Sum_probs=121.0
Q ss_pred CeEEEEEcCCCCcccccCcccccCCCCccEEEecCCCCCccCCcccccccccccccccccccCCCCCCcccccccceecC
Q 006922 66 KRVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSGTLPDFSVWKNLTIINL 145 (625)
Q Consensus 66 ~~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l 145 (625)
..+..|++.+|.+.+..+ +..+++|+.|++++|.+++..+ +..+++|+.|+|++|++++..+ +..+++|+.|+|
T Consensus 243 ~~L~~L~l~~n~l~~~~~---~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~-~~~l~~L~~L~L 316 (466)
T 1o6v_A 243 TNLTDLDLANNQISNLAP---LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP-ISNLKNLTYLTL 316 (466)
T ss_dssp TTCSEEECCSSCCCCCGG---GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG-GGGCTTCSEEEC
T ss_pred CCCCEEECCCCccccchh---hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh-hcCCCCCCEEEC
Confidence 358889999999987643 8999999999999999998544 8899999999999999997555 889999999999
Q ss_pred CCccCCCCCCCCccccccccceecccccccccCCCCCCCCCcEEEcccCCCccccccccccCCC---CcccCCCCCC
Q 006922 146 SDNGFNGTIPRSLSNLTQLEALYLANNSLSGKIPDLNLPNLQQLNLANNNLSGSIPQSLKRFPS---SAFVGNSISF 219 (625)
Q Consensus 146 s~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~l~~L~~L~l~~N~l~g~~p~~l~~~~~---~~~~~n~~~~ 219 (625)
++|++++..| +..+++|+.|++++|++++...-..+++|+.|++++|++++..| +..++. +.+.+|.+..
T Consensus 317 ~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~~~~ 389 (466)
T 1o6v_A 317 YFNNISDISP--VSSLTKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTN 389 (466)
T ss_dssp CSSCCSCCGG--GGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCBCGG--GTTCTTCCEEECCCEEEEC
T ss_pred cCCcCCCchh--hccCccCCEeECCCCccCCchhhccCCCCCEEeCCCCccCccch--hhcCCCCCEEeccCCcccC
Confidence 9999998766 78999999999999999986333489999999999999998887 555554 4555666543
No 373
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.38 E-value=6.7e-13 Score=132.11 Aligned_cols=124 Identities=22% Similarity=0.334 Sum_probs=108.1
Q ss_pred CeEEEEEcCCCCcccccCcccccCCCCccEEEecCCCCCccCCcccccccccccccccccccCCCCCCcccccccceecC
Q 006922 66 KRVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSGTLPDFSVWKNLTIINL 145 (625)
Q Consensus 66 ~~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l 145 (625)
..++.|+|++|.+++. ++ +..+++|+.|+|++|++++ +|. +.. ++|+.|+|++|++++ ++.+..+++|+.|+|
T Consensus 63 ~~L~~L~L~~N~i~~~-~~--l~~l~~L~~L~L~~N~l~~-l~~-~~~-~~L~~L~L~~N~l~~-~~~l~~l~~L~~L~L 135 (263)
T 1xeu_A 63 TNLKELHLSHNQISDL-SP--LKDLTKLEELSVNRNRLKN-LNG-IPS-ACLSRLFLDNNELRD-TDSLIHLKNLEILSI 135 (263)
T ss_dssp TTCCEEECCSSCCCCC-GG--GTTCSSCCEEECCSSCCSC-CTT-CCC-SSCCEEECCSSCCSB-SGGGTTCTTCCEEEC
T ss_pred CCCCEEECCCCccCCC-hh--hccCCCCCEEECCCCccCC-cCc-ccc-CcccEEEccCCccCC-ChhhcCcccccEEEC
Confidence 4688999999999874 33 9999999999999999998 443 333 999999999999996 577999999999999
Q ss_pred CCccCCCCCCCCccccccccceecccccccccCCC-CCCCCCcEEEcccCCCccc
Q 006922 146 SDNGFNGTIPRSLSNLTQLEALYLANNSLSGKIPD-LNLPNLQQLNLANNNLSGS 199 (625)
Q Consensus 146 s~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~-~~l~~L~~L~l~~N~l~g~ 199 (625)
++|+|++. + .+..+++|+.|+|++|++++. +. ..+++|+.|++++|++++.
T Consensus 136 s~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~~-~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 136 RNNKLKSI-V-MLGFLSKLEVLDLHGNEITNT-GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp TTSCCCBC-G-GGGGCTTCCEEECTTSCCCBC-TTSTTCCCCCEEEEEEEEEECC
T ss_pred CCCcCCCC-h-HHccCCCCCEEECCCCcCcch-HHhccCCCCCEEeCCCCcccCC
Confidence 99999964 4 689999999999999999987 43 3889999999999999855
No 374
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.36 E-value=2.6e-12 Score=138.24 Aligned_cols=127 Identities=27% Similarity=0.446 Sum_probs=82.5
Q ss_pred eEEEEEcCCCCcccccCcccccCCCCccEEEecCCCCCccCCcccccccccccccccccccCCCCCCcccccccceecCC
Q 006922 67 RVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSGTLPDFSVWKNLTIINLS 146 (625)
Q Consensus 67 ~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~ls 146 (625)
.++.|++++|.+++ ++. + .++|++|++++|.+++ +| .|+++++|++|++++|++++ +|.. ..+|++|+++
T Consensus 112 ~L~~L~l~~n~l~~-l~~--~--~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~--~~~L~~L~L~ 181 (454)
T 1jl5_A 112 SLKSLLVDNNNLKA-LSD--L--PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDL--PPSLEFIAAG 181 (454)
T ss_dssp TCCEEECCSSCCSC-CCS--C--CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCC--CTTCCEEECC
T ss_pred CCcEEECCCCccCc-ccC--C--CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCC--cccccEEECc
Confidence 34555555555553 221 1 1577888888888876 66 57778888888888888775 4432 2477777888
Q ss_pred CccCCCCCCCCccccccccceecccccccccCCCCCCCCCcEEEcccCCCccccccccccCCC
Q 006922 147 DNGFNGTIPRSLSNLTQLEALYLANNSLSGKIPDLNLPNLQQLNLANNNLSGSIPQSLKRFPS 209 (625)
Q Consensus 147 ~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~l~~L~~L~l~~N~l~g~~p~~l~~~~~ 209 (625)
+|++++ +| .++.+++|+.|++++|++++ +|.. .++|+.|++++|+++ .+|. +..++.
T Consensus 182 ~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~-~~~L~~L~l~~n~l~-~lp~-~~~l~~ 238 (454)
T 1jl5_A 182 NNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDL-PLSLESIVAGNNILE-ELPE-LQNLPF 238 (454)
T ss_dssp SSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCC-CTTCCEEECCSSCCS-SCCC-CTTCTT
T ss_pred CCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCC-cCcccEEECcCCcCC-cccc-cCCCCC
Confidence 887775 45 57777777777777777775 3332 356777777777776 5663 544444
No 375
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.34 E-value=5.3e-13 Score=138.35 Aligned_cols=144 Identities=26% Similarity=0.412 Sum_probs=119.5
Q ss_pred CeEEEEEcCCCCcccccCcccccCCCCccEEEecCCCCCccCCcccccccccccccccccccCCCCCCcccccccceecC
Q 006922 66 KRVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSGTLPDFSVWKNLTIINL 145 (625)
Q Consensus 66 ~~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l 145 (625)
..+..+++.+|.+.+..+ +..+++|+.|++++|.+++..+ +..+++|++|++++|.+++ ++.+..+++|+.|++
T Consensus 199 ~~L~~L~l~~n~l~~~~~---~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~~~~~~l~~L~~L~l 272 (347)
T 4fmz_A 199 TSLHYFTAYVNQITDITP---VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISD-INAVKDLTKLKMLNV 272 (347)
T ss_dssp TTCCEEECCSSCCCCCGG---GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-CGGGTTCTTCCEEEC
T ss_pred CccceeecccCCCCCCch---hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCC-ChhHhcCCCcCEEEc
Confidence 357889999999886533 8899999999999999997544 8999999999999999986 578899999999999
Q ss_pred CCccCCCCCCCCccccccccceecccccccccCCCC--CCCCCcEEEcccCCCccccc-cccccCCCCcccCCCC
Q 006922 146 SDNGFNGTIPRSLSNLTQLEALYLANNSLSGKIPDL--NLPNLQQLNLANNNLSGSIP-QSLKRFPSSAFVGNSI 217 (625)
Q Consensus 146 s~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~L~l~~N~l~g~~p-~~l~~~~~~~~~~n~~ 217 (625)
++|++++. ..+..+++|+.|+|++|++++..|.. .+++|+.|+|++|++++..| ..+.++..+.+.+|++
T Consensus 273 ~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~l~~N~i 345 (347)
T 4fmz_A 273 GSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRPLASLSKMDSADFANQVI 345 (347)
T ss_dssp CSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGGGGGCTTCSEESSSCC--
T ss_pred cCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccChhhhhccceeehhhhcc
Confidence 99999864 45889999999999999999877763 78999999999999998777 2333444456666654
No 376
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.34 E-value=3.5e-12 Score=137.33 Aligned_cols=137 Identities=18% Similarity=0.146 Sum_probs=99.8
Q ss_pred CeEEEEEcCCCCcccccCcccccCCCCccEEEecCCCCCccCCcccccccccccccccccccCCCCCCcccccccceecC
Q 006922 66 KRVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSGTLPDFSVWKNLTIINL 145 (625)
Q Consensus 66 ~~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l 145 (625)
..++.|+|++|.+++ ++ ++.+++|++|++++|.+++. + ++++++|++|++++|+..+.+ .+..+++|+.|++
T Consensus 106 ~~L~~L~L~~N~l~~-l~---~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~-~~~~l~~L~~L~l 177 (457)
T 3bz5_A 106 TKLTYLNCDTNKLTK-LD---VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKL-DVTPQTQLTTLDC 177 (457)
T ss_dssp TTCCEEECCSSCCSC-CC---CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC-CCTTCTTCCEEEC
T ss_pred CcCCEEECCCCcCCe-ec---CCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCccccc-ccccCCcCCEEEC
Confidence 357889999999987 43 88999999999999999884 3 778888888888888665555 4677788888888
Q ss_pred CCccCCCCCCCCccccccccceecccccccccCCCCCCCCCcEEEcccCCCccccccccccCCC---CcccCCCC
Q 006922 146 SDNGFNGTIPRSLSNLTQLEALYLANNSLSGKIPDLNLPNLQQLNLANNNLSGSIPQSLKRFPS---SAFVGNSI 217 (625)
Q Consensus 146 s~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~l~~L~~L~l~~N~l~g~~p~~l~~~~~---~~~~~n~~ 217 (625)
++|++++ +| +..+++|+.|++++|++++. +-..+++|+.|++++|++++ +| +..++. +.+.+|.+
T Consensus 178 s~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~-~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l 245 (457)
T 3bz5_A 178 SFNKITE-LD--VSQNKLLNRLNCDTNNITKL-DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPL 245 (457)
T ss_dssp CSSCCCC-CC--CTTCTTCCEEECCSSCCSCC-CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCC
T ss_pred CCCccce-ec--cccCCCCCEEECcCCcCCee-ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcC
Confidence 8888875 44 67777777777777777764 33367777777777777776 45 444443 34444543
No 377
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.34 E-value=1.1e-12 Score=144.74 Aligned_cols=105 Identities=27% Similarity=0.386 Sum_probs=74.4
Q ss_pred CccEEEecCCCCCccCCcccccccccccccccccccCCCCC-CcccccccceecCCCccCCCCCCCCccccccccceecc
Q 006922 92 ALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSGTLP-DFSVWKNLTIINLSDNGFNGTIPRSLSNLTQLEALYLA 170 (625)
Q Consensus 92 ~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~ls~N~l~~~~p~~l~~l~~L~~L~l~ 170 (625)
.|+.|+|++|.|++ +|. |+++++|+.|+|++|+|+ .+| .++.+++|+.|+|++|+|++ +| .++.+++|+.|+|+
T Consensus 442 ~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls 516 (567)
T 1dce_A 442 DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLC 516 (567)
T ss_dssp TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECC
T ss_pred CceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECC
Confidence 45677777777776 554 777777777777777777 444 67777777777777777775 56 67777777777777
Q ss_pred cccccccC-CCC--CCCCCcEEEcccCCCccccc
Q 006922 171 NNSLSGKI-PDL--NLPNLQQLNLANNNLSGSIP 201 (625)
Q Consensus 171 ~N~l~~~~-p~~--~l~~L~~L~l~~N~l~g~~p 201 (625)
+|+|++.+ |.. .+++|+.|+|++|+|++.+|
T Consensus 517 ~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 550 (567)
T 1dce_A 517 NNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEG 550 (567)
T ss_dssp SSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSS
T ss_pred CCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCcc
Confidence 77777764 542 67777777777777775544
No 378
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.33 E-value=4.5e-13 Score=144.19 Aligned_cols=143 Identities=19% Similarity=0.166 Sum_probs=67.1
Q ss_pred CeEEEEEcCCCCcccccCcccccCCCCccEEEecCCCCCccCCccccccccc-------------ccccccccccCCCCC
Q 006922 66 KRVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPSDFINLKSL-------------CYLYLQFNNFSGTLP 132 (625)
Q Consensus 66 ~~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L-------------~~L~L~~N~l~~~~p 132 (625)
.++..++++++++ |.+|++ |++|++|++|++++|.+.|.+|..++++.+| ++|++++|.+++. |
T Consensus 11 ~~L~~L~l~~n~l-~~iP~~-i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~l-p 87 (454)
T 1jl5_A 11 TFLQEPLRHSSNL-TEMPVE-AENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSSL-P 87 (454)
T ss_dssp -------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSCC-C
T ss_pred ccchhhhcccCch-hhCChh-HhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCccccC-C
Confidence 4577788888888 788765 8888888888888888888888888777654 6677777766652 2
Q ss_pred CcccccccceecCCCccCCCCCCCCcc----------------cc-ccccceecccccccccCCCC-CCCCCcEEEcccC
Q 006922 133 DFSVWKNLTIINLSDNGFNGTIPRSLS----------------NL-TQLEALYLANNSLSGKIPDL-NLPNLQQLNLANN 194 (625)
Q Consensus 133 ~~~~l~~L~~L~ls~N~l~~~~p~~l~----------------~l-~~L~~L~l~~N~l~~~~p~~-~l~~L~~L~l~~N 194 (625)
.+ .++|+.|++++|++++ +|..+. .+ ++|++|++++|++++ +|.. .+++|+.|++++|
T Consensus 88 ~~--~~~L~~L~l~~n~l~~-lp~~~~~L~~L~l~~n~l~~l~~~~~~L~~L~L~~n~l~~-lp~~~~l~~L~~L~l~~N 163 (454)
T 1jl5_A 88 EL--PPHLESLVASCNSLTE-LPELPQSLKSLLVDNNNLKALSDLPPLLEYLGVSNNQLEK-LPELQNSSFLKIIDVDNN 163 (454)
T ss_dssp SC--CTTCSEEECCSSCCSS-CCCCCTTCCEEECCSSCCSCCCSCCTTCCEEECCSSCCSS-CCCCTTCTTCCEEECCSS
T ss_pred CC--cCCCCEEEccCCcCCc-cccccCCCcEEECCCCccCcccCCCCCCCEEECcCCCCCC-CcccCCCCCCCEEECCCC
Confidence 21 2445555555555553 333210 01 345555555555554 3332 4555555555555
Q ss_pred CCccccccccccCCCCcccCCC
Q 006922 195 NLSGSIPQSLKRFPSSAFVGNS 216 (625)
Q Consensus 195 ~l~g~~p~~l~~~~~~~~~~n~ 216 (625)
++++ +|..+.++..+.+.+|.
T Consensus 164 ~l~~-lp~~~~~L~~L~L~~n~ 184 (454)
T 1jl5_A 164 SLKK-LPDLPPSLEFIAAGNNQ 184 (454)
T ss_dssp CCSC-CCCCCTTCCEEECCSSC
T ss_pred cCcc-cCCCcccccEEECcCCc
Confidence 5553 44444444444444444
No 379
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.32 E-value=6.3e-13 Score=147.92 Aligned_cols=150 Identities=20% Similarity=0.327 Sum_probs=95.1
Q ss_pred CCCCCCCCCCCCCce--------EeCCCCCeEEEEEcCCCCcccccCcccccCCCCccEEEecCCCCCccCCcccccccc
Q 006922 45 NWNESTSVCNHWTGV--------KCSEDGKRVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPSDFINLKS 116 (625)
Q Consensus 45 ~w~~~~~~c~~w~gv--------~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~ 116 (625)
.|....++| .|.|. .|.. ..++.|++++++++ .+|.. +. ++|+.|+|++|.|+. +|. .+++
T Consensus 14 ~W~~~~~~~-~~~~r~~~~~~~~~c~~--~~l~~L~ls~n~L~-~lp~~-l~--~~L~~L~L~~N~l~~-lp~---~l~~ 82 (622)
T 3g06_A 14 AWRRAAPAE-ESRGRAAVVQKMRACLN--NGNAVLNVGESGLT-TLPDC-LP--AHITTLVIPDNNLTS-LPA---LPPE 82 (622)
T ss_dssp HHHHTCCGG-GHHHHHHHHHHHHHHHH--HCCCEEECCSSCCS-CCCSC-CC--TTCSEEEECSCCCSC-CCC---CCTT
T ss_pred HHHhcCCcc-hhccccccCcccccccC--CCCcEEEecCCCcC-ccChh-hC--CCCcEEEecCCCCCC-CCC---cCCC
Confidence 465444444 78663 2332 34777888888887 66654 43 788888888888885 554 4678
Q ss_pred cccccccccccCCCCCCcccccccceecCCCccCCCCCCCCccccccccceecccccccccCCCCCCCCCcEEEcccCCC
Q 006922 117 LCYLYLQFNNFSGTLPDFSVWKNLTIINLSDNGFNGTIPRSLSNLTQLEALYLANNSLSGKIPDLNLPNLQQLNLANNNL 196 (625)
Q Consensus 117 L~~L~L~~N~l~~~~p~~~~l~~L~~L~ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~l~~L~~L~l~~N~l 196 (625)
|++|+|++|++++ +|. .+++|++|+|++|+|++ +|. .+++|+.|+|++|++++ +|. .+++|++|+|++|++
T Consensus 83 L~~L~Ls~N~l~~-lp~--~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N~l~~-lp~-~l~~L~~L~Ls~N~l 153 (622)
T 3g06_A 83 LRTLEVSGNQLTS-LPV--LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIFGNQLTS-LPV-LPPGLQELSVSDNQL 153 (622)
T ss_dssp CCEEEECSCCCSC-CCC--CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECCSSCCSC-CCC-CCTTCCEEECCSSCC
T ss_pred CCEEEcCCCcCCc-CCC--CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECCCCCCCc-CCC-CCCCCCEEECcCCcC
Confidence 8888888888874 443 56777788888887774 444 34566677777777665 333 246666666666666
Q ss_pred ccccccccccCCCCcccCC
Q 006922 197 SGSIPQSLKRFPSSAFVGN 215 (625)
Q Consensus 197 ~g~~p~~l~~~~~~~~~~n 215 (625)
++ +|..+..+..+.+.+|
T Consensus 154 ~~-l~~~~~~L~~L~L~~N 171 (622)
T 3g06_A 154 AS-LPALPSELCKLWAYNN 171 (622)
T ss_dssp SC-CCCCCTTCCEEECCSS
T ss_pred CC-cCCccCCCCEEECCCC
Confidence 63 4444444444434333
No 380
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.22 E-value=1e-11 Score=128.78 Aligned_cols=104 Identities=19% Similarity=0.195 Sum_probs=91.4
Q ss_pred cEEEecCC-CCCccCCcccccccccccccccc-cccCCCCC-CcccccccceecCCCccCCCCCCCCccccccccceecc
Q 006922 94 KILSLRSN-VITGYFPSDFINLKSLCYLYLQF-NNFSGTLP-DFSVWKNLTIINLSDNGFNGTIPRSLSNLTQLEALYLA 170 (625)
Q Consensus 94 ~~L~l~~N-~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p-~~~~l~~L~~L~ls~N~l~~~~p~~l~~l~~L~~L~l~ 170 (625)
..+++++| .|++ +|. |..+++|+.|+|++ |+|++.++ .|..+++|+.|+|++|+|++..|..|.++++|+.|+|+
T Consensus 11 ~~v~~~~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 11 SGLRCTRDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SCEECCSSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CEEEcCCCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 35688888 8997 787 99999999999996 99998776 69999999999999999999888899999999999999
Q ss_pred cccccccCCCC-CCCCCcEEEcccCCCccc
Q 006922 171 NNSLSGKIPDL-NLPNLQQLNLANNNLSGS 199 (625)
Q Consensus 171 ~N~l~~~~p~~-~l~~L~~L~l~~N~l~g~ 199 (625)
+|+|++.++.. ....|+.|+|++|+|...
T Consensus 89 ~N~l~~~~~~~~~~~~L~~l~l~~N~~~c~ 118 (347)
T 2ifg_A 89 FNALESLSWKTVQGLSLQELVLSGNPLHCS 118 (347)
T ss_dssp SSCCSCCCSTTTCSCCCCEEECCSSCCCCC
T ss_pred CCccceeCHHHcccCCceEEEeeCCCccCC
Confidence 99999876653 333499999999999743
No 381
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.21 E-value=4.3e-11 Score=133.14 Aligned_cols=52 Identities=25% Similarity=0.393 Sum_probs=23.3
Q ss_pred ccccceecccccccccCCCCCCCCCcEEEcccCCCccccccccccCCCCcccCCC
Q 006922 162 TQLEALYLANNSLSGKIPDLNLPNLQQLNLANNNLSGSIPQSLKRFPSSAFVGNS 216 (625)
Q Consensus 162 ~~L~~L~l~~N~l~~~~p~~~l~~L~~L~l~~N~l~g~~p~~l~~~~~~~~~~n~ 216 (625)
++|+.|+|++|+|++ +| ..+++|+.|+|++|+|+ .+|..+.++..+.+.+|.
T Consensus 221 ~~L~~L~Ls~N~L~~-lp-~~l~~L~~L~Ls~N~L~-~lp~~~~~L~~L~Ls~N~ 272 (622)
T 3g06_A 221 SGLKELIVSGNRLTS-LP-VLPSELKELMVSGNRLT-SLPMLPSGLLSLSVYRNQ 272 (622)
T ss_dssp TTCCEEECCSSCCSC-CC-CCCTTCCEEECCSSCCS-CCCCCCTTCCEEECCSSC
T ss_pred CCCCEEEccCCccCc-CC-CCCCcCcEEECCCCCCC-cCCcccccCcEEeCCCCC
Confidence 345555555555554 22 23344555555555554 344333333334444443
No 382
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.21 E-value=3.1e-13 Score=139.43 Aligned_cols=126 Identities=22% Similarity=0.232 Sum_probs=72.8
Q ss_pred eEEEEEcCCCCcccccCcccccCCCCccEEEecCCCCCcc-CCcccccccccccccccccccCCCCC-Ccccccccceec
Q 006922 67 RVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGY-FPSDFINLKSLCYLYLQFNNFSGTLP-DFSVWKNLTIIN 144 (625)
Q Consensus 67 ~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~ 144 (625)
.++.++++++.+.+..+. +..+++|++|+|++|.+++. +|..+..+++|++|+|++|.+++..+ .++.+++|++|+
T Consensus 71 ~l~~L~l~~n~l~~~~~~--~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~ 148 (336)
T 2ast_B 71 GVIAFRCPRSFMDQPLAE--HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLN 148 (336)
T ss_dssp TCSEEECTTCEECSCCCS--CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEE
T ss_pred cceEEEcCCccccccchh--hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEE
Confidence 456666666666655443 45566666666666666544 55556666666666666666654443 455566666666
Q ss_pred CCCc-cCCCC-CCCCccccccccceecccc-ccccc-CCCC--CCC-CCcEEEcccC
Q 006922 145 LSDN-GFNGT-IPRSLSNLTQLEALYLANN-SLSGK-IPDL--NLP-NLQQLNLANN 194 (625)
Q Consensus 145 ls~N-~l~~~-~p~~l~~l~~L~~L~l~~N-~l~~~-~p~~--~l~-~L~~L~l~~N 194 (625)
|++| .+++. ++..+..+++|++|+|++| .+++. ++.. .++ +|+.|+|++|
T Consensus 149 L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~ 205 (336)
T 2ast_B 149 LSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGY 205 (336)
T ss_dssp CTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSC
T ss_pred CCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCC
Confidence 6666 45542 4444555666666666666 55532 2221 445 5666666655
No 383
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.19 E-value=5.6e-13 Score=140.47 Aligned_cols=133 Identities=23% Similarity=0.334 Sum_probs=77.3
Q ss_pred CeEEEEEcCCCCccc----ccCcccccCCCCccEEEecCCCCCccCCccc----ccc---------cccccccccccccC
Q 006922 66 KRVVAVRLPGVGFSG----LIPPNTISRLSALKILSLRSNVITGYFPSDF----INL---------KSLCYLYLQFNNFS 128 (625)
Q Consensus 66 ~~v~~l~l~~~~l~g----~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~----~~l---------~~L~~L~L~~N~l~ 128 (625)
.+++.|+|++|.+++ .++. .+..+++|++|+|++|.|++..+..+ ..+ ++|++|+|++|+++
T Consensus 94 ~~L~~L~Ls~n~l~~~~~~~l~~-~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~ 172 (386)
T 2ca6_A 94 PKLHTVRLSDNAFGPTAQEPLID-FLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLE 172 (386)
T ss_dssp TTCCEEECCSCCCCTTTHHHHHH-HHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCT
T ss_pred CcccEEECCCCcCCHHHHHHHHH-HHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCC
Confidence 346677777777765 3433 36667777777777777654322222 223 66777777777665
Q ss_pred -CCCC----CcccccccceecCCCccCC--C---CCCCCccccccccceeccccccc----ccCCCC--CCCCCcEEEcc
Q 006922 129 -GTLP----DFSVWKNLTIINLSDNGFN--G---TIPRSLSNLTQLEALYLANNSLS----GKIPDL--NLPNLQQLNLA 192 (625)
Q Consensus 129 -~~~p----~~~~l~~L~~L~ls~N~l~--~---~~p~~l~~l~~L~~L~l~~N~l~----~~~p~~--~l~~L~~L~l~ 192 (625)
+.++ .+..+++|+.|+|++|+|+ | ..|..+..+++|+.|+|++|.++ +.+|.. .+++|+.|+|+
T Consensus 173 ~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~ 252 (386)
T 2ca6_A 173 NGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLN 252 (386)
T ss_dssp GGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECT
T ss_pred cHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECC
Confidence 3333 2445566666666666665 2 23445666666666666666664 333321 45666666666
Q ss_pred cCCCccc
Q 006922 193 NNNLSGS 199 (625)
Q Consensus 193 ~N~l~g~ 199 (625)
+|++++.
T Consensus 253 ~n~i~~~ 259 (386)
T 2ca6_A 253 DCLLSAR 259 (386)
T ss_dssp TCCCCHH
T ss_pred CCCCchh
Confidence 6666544
No 384
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.19 E-value=4.6e-13 Score=138.11 Aligned_cols=140 Identities=18% Similarity=0.251 Sum_probs=68.3
Q ss_pred CCCCCCceEeCCCCCeEEEEEcCCCCcccccCcccccCC--CCccEEEecCCCCCccCCcccccccccccccccccccCC
Q 006922 52 VCNHWTGVKCSEDGKRVVAVRLPGVGFSGLIPPNTISRL--SALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSG 129 (625)
Q Consensus 52 ~c~~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~l--~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 129 (625)
.|..|.++.|+. ..+..++++++.+. +..+..+ ++++.|++++|.+.+..+. +..+++|++|+|++|.+++
T Consensus 35 vc~~W~~~~~~~--~~~~~l~l~~~~~~----~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~ 107 (336)
T 2ast_B 35 VCKRWYRLASDE--SLWQTLDLTGKNLH----PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEV 107 (336)
T ss_dssp SCHHHHHHHTCS--TTSSEEECTTCBCC----HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECH
T ss_pred HHHHHHHHhcCc--hhheeeccccccCC----HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCH
Confidence 343455555542 12344555555444 2234444 5555555555555554332 3445555555555555543
Q ss_pred C-CC-CcccccccceecCCCccCCCCCCCCccccccccceecccc-ccccc-CCCC--CCCCCcEEEcccC-CCcc
Q 006922 130 T-LP-DFSVWKNLTIINLSDNGFNGTIPRSLSNLTQLEALYLANN-SLSGK-IPDL--NLPNLQQLNLANN-NLSG 198 (625)
Q Consensus 130 ~-~p-~~~~l~~L~~L~ls~N~l~~~~p~~l~~l~~L~~L~l~~N-~l~~~-~p~~--~l~~L~~L~l~~N-~l~g 198 (625)
. +| .+..+++|++|+|++|.+++..+..+..+++|++|+|++| .+++. ++.. .+++|+.|++++| .+++
T Consensus 108 ~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~ 183 (336)
T 2ast_B 108 STLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTE 183 (336)
T ss_dssp HHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCH
T ss_pred HHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcCh
Confidence 2 33 3444555555555555555444445555555555555555 34431 2221 3455555555555 5543
No 385
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.18 E-value=6e-13 Score=140.23 Aligned_cols=152 Identities=17% Similarity=0.266 Sum_probs=108.9
Q ss_pred CeEEEEEcCCC---CcccccCccc------ccCCCCccEEEecCCCCCc----cCCcccccccccccccccccccCCCCC
Q 006922 66 KRVVAVRLPGV---GFSGLIPPNT------ISRLSALKILSLRSNVITG----YFPSDFINLKSLCYLYLQFNNFSGTLP 132 (625)
Q Consensus 66 ~~v~~l~l~~~---~l~g~~~~~~------~~~l~~L~~L~l~~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p 132 (625)
..++.|+|++| .+++.+|... +..+++|++|+|++|.|++ .+|..+.++++|++|+|++|.+++..+
T Consensus 60 ~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~ 139 (386)
T 2ca6_A 60 KDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAG 139 (386)
T ss_dssp TTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHH
T ss_pred CCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHH
Confidence 35777888874 5566666542 4788899999999998887 466678888899999999998864322
Q ss_pred -C----cccc---------cccceecCCCccCC-CCCC---CCccccccccceeccccccc--c---cCC-CC-CCCCCc
Q 006922 133 -D----FSVW---------KNLTIINLSDNGFN-GTIP---RSLSNLTQLEALYLANNSLS--G---KIP-DL-NLPNLQ 187 (625)
Q Consensus 133 -~----~~~l---------~~L~~L~ls~N~l~-~~~p---~~l~~l~~L~~L~l~~N~l~--~---~~p-~~-~l~~L~ 187 (625)
. +..+ ++|++|+|++|+++ +.+| ..+..+++|+.|+|++|+++ | .+| .. .+++|+
T Consensus 140 ~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~ 219 (386)
T 2ca6_A 140 AKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELK 219 (386)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCC
T ss_pred HHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCcc
Confidence 1 3333 78899999999887 3444 35667888999999999887 3 344 32 678889
Q ss_pred EEEcccCCCc----cccccccccCCCC---cccCCCC
Q 006922 188 QLNLANNNLS----GSIPQSLKRFPSS---AFVGNSI 217 (625)
Q Consensus 188 ~L~l~~N~l~----g~~p~~l~~~~~~---~~~~n~~ 217 (625)
.|+|++|.++ +.+|..+..++.+ .+.+|.+
T Consensus 220 ~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i 256 (386)
T 2ca6_A 220 VLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLL 256 (386)
T ss_dssp EEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCC
T ss_pred EEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCC
Confidence 9999999886 6677776666554 4445543
No 386
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.17 E-value=8.1e-11 Score=116.79 Aligned_cols=135 Identities=16% Similarity=0.103 Sum_probs=105.6
Q ss_pred HcccCCceeEEEEEEcCCcEEEEEEecccc-CChHHHHHHHHHHHcCC-CCceecceeEEEecCceEEEEEeccCCChhh
Q 006922 331 VLGKGTFGMAYKAILEDGTTVVVKRLKDVN-VGKRDFEQQMEIVGSIR-HENVVELKAYYYSKDEKLMVYDYYSLGSVSA 408 (625)
Q Consensus 331 ~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~-~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~ 408 (625)
.++.|+.+.||++... ++.+++|+..... .....+.+|++++..+. +..+.++++++...+..++||||++|.++.+
T Consensus 21 ~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~ 99 (263)
T 3tm0_A 21 DTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCSE 99 (263)
T ss_dssp CCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEEHHH
T ss_pred eccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecCCeehhh
Confidence 4677888999999754 6899999987532 23457899999999884 6778889999988888999999999999877
Q ss_pred hhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcC--------------------------------------------
Q 006922 409 MLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAAN-------------------------------------------- 444 (625)
Q Consensus 409 ~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~-------------------------------------------- 444 (625)
.+... .....++.+++++++.||...
T Consensus 100 ~~~~~----------~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (263)
T 3tm0_A 100 EYEDE----------QSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPRE 169 (263)
T ss_dssp HCCTT----------TCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSSHHH
T ss_pred ccCCc----------ccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCCCHHH
Confidence 64211 123468889999999999811
Q ss_pred ------------CCCceecCCCCCCEEeCCCCCeeEeccccccc
Q 006922 445 ------------GGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTI 476 (625)
Q Consensus 445 ------------~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~ 476 (625)
.+.++|+|+++.||+++++..+.|+||+.+..
T Consensus 170 l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~ 213 (263)
T 3tm0_A 170 LYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR 213 (263)
T ss_dssp HHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhccc
Confidence 13489999999999998765567999997654
No 387
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.16 E-value=2.7e-12 Score=134.00 Aligned_cols=136 Identities=21% Similarity=0.272 Sum_probs=80.9
Q ss_pred eEEEEEcCCCCcccccCc---ccccCCC-CccEEEecCCCCCccCCcccccc-----cccccccccccccCCCCCC----
Q 006922 67 RVVAVRLPGVGFSGLIPP---NTISRLS-ALKILSLRSNVITGYFPSDFINL-----KSLCYLYLQFNNFSGTLPD---- 133 (625)
Q Consensus 67 ~v~~l~l~~~~l~g~~~~---~~~~~l~-~L~~L~l~~N~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~~p~---- 133 (625)
.++.|+|++|.+++.-+. +.+..++ +|++|+|++|.|++..+..+..+ ++|++|+|++|++++..+.
T Consensus 23 ~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~ 102 (362)
T 3goz_A 23 GVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVK 102 (362)
T ss_dssp TCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHH
T ss_pred CceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHHH
Confidence 366677777776643220 3466666 67777777777776656556554 6777777777777655442
Q ss_pred -cccc-cccceecCCCccCCCCCCCCccc-----cccccceecccccccccCCC----C--CCC-CCcEEEcccCCCccc
Q 006922 134 -FSVW-KNLTIINLSDNGFNGTIPRSLSN-----LTQLEALYLANNSLSGKIPD----L--NLP-NLQQLNLANNNLSGS 199 (625)
Q Consensus 134 -~~~l-~~L~~L~ls~N~l~~~~p~~l~~-----l~~L~~L~l~~N~l~~~~p~----~--~l~-~L~~L~l~~N~l~g~ 199 (625)
+..+ ++|++|+|++|+|++..+..+.. .++|++|+|++|.+++.... . .++ +|+.|+|++|++++.
T Consensus 103 ~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~ 182 (362)
T 3goz_A 103 TLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASK 182 (362)
T ss_dssp HHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGS
T ss_pred HHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCchh
Confidence 3333 66777777777776544433322 24677777777777642221 1 233 677777777777655
Q ss_pred ccc
Q 006922 200 IPQ 202 (625)
Q Consensus 200 ~p~ 202 (625)
.+.
T Consensus 183 ~~~ 185 (362)
T 3goz_A 183 NCA 185 (362)
T ss_dssp CHH
T ss_pred hHH
Confidence 543
No 388
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.12 E-value=5e-12 Score=131.96 Aligned_cols=146 Identities=24% Similarity=0.176 Sum_probs=113.0
Q ss_pred EEcCCCCcccccCcccccCCCCccEEEecCCCCCccCC----ccccccc-ccccccccccccCCCCC-Ccccc-----cc
Q 006922 71 VRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFP----SDFINLK-SLCYLYLQFNNFSGTLP-DFSVW-----KN 139 (625)
Q Consensus 71 l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~~~p----~~~~~l~-~L~~L~L~~N~l~~~~p-~~~~l-----~~ 139 (625)
.+|+.++++|.+|. .+...++|++|+|++|.|++..+ ..+..++ +|++|+|++|++++..+ .+..+ ++
T Consensus 3 ~~ls~n~~~~~~~~-~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 3 YKLTLHPGSNPVEE-FTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EECCCCTTCCHHHH-HHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred cccccccchHHHHH-HHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 57888999998865 46666779999999999998766 6778888 99999999999987655 45544 89
Q ss_pred cceecCCCccCCCCCCCCccc----c-ccccceecccccccccCCCC------C-CCCCcEEEcccCCCcccc----ccc
Q 006922 140 LTIINLSDNGFNGTIPRSLSN----L-TQLEALYLANNSLSGKIPDL------N-LPNLQQLNLANNNLSGSI----PQS 203 (625)
Q Consensus 140 L~~L~ls~N~l~~~~p~~l~~----l-~~L~~L~l~~N~l~~~~p~~------~-l~~L~~L~l~~N~l~g~~----p~~ 203 (625)
|++|+|++|++++..+..+.. + ++|++|+|++|++++..+.. . .++|+.|+|++|++++.. +..
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~ 161 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQI 161 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHH
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHH
Confidence 999999999999776665444 3 89999999999998765531 2 369999999999998533 333
Q ss_pred cc----cCCCCcccCCCC
Q 006922 204 LK----RFPSSAFVGNSI 217 (625)
Q Consensus 204 l~----~~~~~~~~~n~~ 217 (625)
+. ++..+.+.+|.+
T Consensus 162 l~~~~~~L~~L~Ls~n~l 179 (362)
T 3goz_A 162 LAAIPANVNSLNLRGNNL 179 (362)
T ss_dssp HHTSCTTCCEEECTTSCG
T ss_pred HhcCCccccEeeecCCCC
Confidence 33 344455556654
No 389
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.11 E-value=1.4e-10 Score=120.46 Aligned_cols=140 Identities=15% Similarity=0.117 Sum_probs=106.6
Q ss_pred eEeCCCCCeEEEEEcCCCCcccccCcccccCCCCccEEEecCCCCCccCCcccccccccccccccccccCCCCC--Cccc
Q 006922 59 VKCSEDGKRVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSGTLP--DFSV 136 (625)
Q Consensus 59 v~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p--~~~~ 136 (625)
.+|+. .. ++-++++|+ .+|.+ + .++|++|+|++|+|+...+..|.++++|++|+|++|++.+.+| .|..
T Consensus 7 C~C~~--~~---v~C~~~~Lt-~iP~~-l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~ 77 (350)
T 4ay9_X 7 CHCSN--RV---FLCQESKVT-EIPSD-L--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSN 77 (350)
T ss_dssp SEEET--TE---EEEESTTCC-SCCTT-C--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCS
T ss_pred cEeeC--CE---EEecCCCCC-ccCcC-c--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhc
Confidence 56764 22 455677887 56754 4 3689999999999998666789999999999999999988776 4788
Q ss_pred ccccce-ecCCCccCCCCCCCCccccccccceecccccccccCCCC--CCCCCcEEEccc-CCCccccccccccC
Q 006922 137 WKNLTI-INLSDNGFNGTIPRSLSNLTQLEALYLANNSLSGKIPDL--NLPNLQQLNLAN-NNLSGSIPQSLKRF 207 (625)
Q Consensus 137 l~~L~~-L~ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~L~l~~-N~l~g~~p~~l~~~ 207 (625)
+++|+. +.+++|+|+...|..|..+++|++|++++|++++..+.. ...++..|++.+ |+++...+..+..+
T Consensus 78 L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~ 152 (350)
T 4ay9_X 78 LPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGL 152 (350)
T ss_dssp CTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTS
T ss_pred chhhhhhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhc
Confidence 888765 677789999877889999999999999999998766543 445667777755 45653333344433
No 390
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.11 E-value=1.7e-10 Score=113.97 Aligned_cols=129 Identities=9% Similarity=0.080 Sum_probs=97.8
Q ss_pred ccCCceeEEEEEEcCCcEEEEEEeccccCChHHHHHHHHHHHcCCCCc--eecceeEEEecCceEEEEEeccCCChhhhh
Q 006922 333 GKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHEN--VVELKAYYYSKDEKLMVYDYYSLGSVSAML 410 (625)
Q Consensus 333 g~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~n--iv~l~~~~~~~~~~~lv~e~~~~g~L~~~l 410 (625)
+.|..+.||++...+|..+++|+.... ....+.+|++++..+.+.+ +.+++++....+..++||||++|.++. .
T Consensus 29 ~gg~~~~v~~~~~~~g~~~vlK~~~~~--~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~--~ 104 (264)
T 1nd4_A 29 IGCSDAAVFRLSAQGRPVLFVKTDLSG--ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL--S 104 (264)
T ss_dssp CTTSSCEEEEEECTTSCCEEEEEECSC--TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT--T
T ss_pred cCCCCceEEEEecCCCCeEEEEeCCcc--cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC--c
Confidence 356669999998777888999997654 2356889999998886444 455888888777889999999998884 2
Q ss_pred ccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcC----------------------------------------------
Q 006922 411 HSERGEGRIPLDWDTRMRIAIGAARGIARIHAAN---------------------------------------------- 444 (625)
Q Consensus 411 ~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~---------------------------------------------- 444 (625)
.. .+ ...++.++++.|+.||...
T Consensus 105 ~~--------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (264)
T 1nd4_A 105 SH--------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFAR 173 (264)
T ss_dssp SC--------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHH
T ss_pred Cc--------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHHH
Confidence 11 11 2356777888888888643
Q ss_pred ---------CCCceecCCCCCCEEeCCCCCeeEeccccccc
Q 006922 445 ---------GGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTI 476 (625)
Q Consensus 445 ---------~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~ 476 (625)
...++|+|++|.||+++.+..+.|+|||.+..
T Consensus 174 l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 174 LKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp HHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred HHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 11299999999999998776667999998764
No 391
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.11 E-value=4.1e-13 Score=127.59 Aligned_cols=128 Identities=22% Similarity=0.299 Sum_probs=106.1
Q ss_pred ccCCCCccEEEecCCCCCccCCc------ccccccccccccccccccCCCCCCcccccccceecCCCccCCCCCCCCccc
Q 006922 87 ISRLSALKILSLRSNVITGYFPS------DFINLKSLCYLYLQFNNFSGTLPDFSVWKNLTIINLSDNGFNGTIPRSLSN 160 (625)
Q Consensus 87 ~~~l~~L~~L~l~~N~l~~~~p~------~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~ls~N~l~~~~p~~l~~ 160 (625)
+.....++.++++.|.++|.+|. .|.++++|++|+|++|++++ +|.+..+++|++|+|++|+++ .+|..+..
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~~~~~l~~L~~L~l~~n~l~-~l~~~~~~ 91 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-ISSLSGMENLRILSLGRNLIK-KIENLDAV 91 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CCCHHHHTTCCEEEEEEEEEC-SCSSHHHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-ccccccCCCCCEEECCCCCcc-cccchhhc
Confidence 56677888889999999988887 89999999999999999997 669999999999999999999 67888888
Q ss_pred cccccceecccccccccCCCC-CCCCCcEEEcccCCCccccc-cccccCCC---CcccCCCC
Q 006922 161 LTQLEALYLANNSLSGKIPDL-NLPNLQQLNLANNNLSGSIP-QSLKRFPS---SAFVGNSI 217 (625)
Q Consensus 161 l~~L~~L~l~~N~l~~~~p~~-~l~~L~~L~l~~N~l~g~~p-~~l~~~~~---~~~~~n~~ 217 (625)
+++|+.|+|++|++++. |.. .+++|+.|+|++|++++..+ ..+..++. +.+.+|++
T Consensus 92 ~~~L~~L~L~~N~l~~l-~~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l 152 (198)
T 1ds9_A 92 ADTLEELWISYNQIASL-SGIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPL 152 (198)
T ss_dssp HHHCSEEEEEEEECCCH-HHHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHH
T ss_pred CCcCCEEECcCCcCCcC-CccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCcc
Confidence 89999999999999974 443 67899999999999985322 35555554 44455554
No 392
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=99.05 E-value=6.4e-13 Score=131.10 Aligned_cols=160 Identities=18% Similarity=0.175 Sum_probs=111.9
Q ss_pred CCCCCCceEeCCCCCeEEEEEcCC---CCcccccCcccccCCCCccEEEecCCCCCccCCc-cccccccccc--cccccc
Q 006922 52 VCNHWTGVKCSEDGKRVVAVRLPG---VGFSGLIPPNTISRLSALKILSLRSNVITGYFPS-DFINLKSLCY--LYLQFN 125 (625)
Q Consensus 52 ~c~~w~gv~C~~~~~~v~~l~l~~---~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~~~p~-~~~~l~~L~~--L~L~~N 125 (625)
.| +|.|+.|+.++.+|..+..++ .++.|.+.++.+..|.. .|...+|..++.++- .|...+.|.. ++++.|
T Consensus 77 l~-~~~g~i~~~~~~ki~~~v~~~~~~~~~~~~l~~~~~~~Lk~--~l~~ryn~~~~~LdLs~l~~dp~L~~~~l~l~~N 153 (267)
T 3rw6_A 77 LK-AVNYKILDRENRRISIIINSSAPPHTILNELKPEQVEQLKL--IMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLN 153 (267)
T ss_dssp HH-HTTSSCBCTTSCBCCCEEEECCCCHHHHTSCCHHHHHHHHH--HHHHTEETTTTEEECTTGGGCHHHHHTTCCCCTT
T ss_pred HH-hcCcEEECCCCCEEEEEEecCCCcccccccCCHHHHHHHHH--HHHhccchhccccCHHHcCCCcchhhcCccccCC
Confidence 35 799999998777887776665 45667777766655554 344455555544432 2556666776 778888
Q ss_pred ccC---CCCC-CcccccccceecCCCccCCC--CCCCCccccccccceecccccccccCCCCCCC--CCcEEEcccCCCc
Q 006922 126 NFS---GTLP-DFSVWKNLTIINLSDNGFNG--TIPRSLSNLTQLEALYLANNSLSGKIPDLNLP--NLQQLNLANNNLS 197 (625)
Q Consensus 126 ~l~---~~~p-~~~~l~~L~~L~ls~N~l~~--~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~l~--~L~~L~l~~N~l~ 197 (625)
+.. +.++ ....+++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++.-.-..+. +|+.|+|++|+++
T Consensus 154 ~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~~~l~~l~~l~L~~L~L~~Npl~ 233 (267)
T 3rw6_A 154 RRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLC 233 (267)
T ss_dssp SHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSGGGGGGGTTSCCSEEECTTSTTG
T ss_pred HHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCchhhhhcccCCcceEEccCCcCc
Confidence 543 2222 12467899999999999997 55677788999999999999998752211233 8999999999999
Q ss_pred ccccc-------ccccCCCCcccC
Q 006922 198 GSIPQ-------SLKRFPSSAFVG 214 (625)
Q Consensus 198 g~~p~-------~l~~~~~~~~~~ 214 (625)
+.+|. .+..+|++..++
T Consensus 234 ~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 234 DTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp GGCSSHHHHHHHHHHHCTTCCEES
T ss_pred cccCcchhHHHHHHHHCcccCeEC
Confidence 87763 366788776554
No 393
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=99.01 E-value=1.1e-09 Score=113.98 Aligned_cols=141 Identities=17% Similarity=0.221 Sum_probs=106.0
Q ss_pred hHcccCCceeEEEEEEcCCcEEEEEEec--ccc--CChHHHHHHHHHHHcCC--CCceecceeEEEec---CceEEEEEe
Q 006922 330 EVLGKGTFGMAYKAILEDGTTVVVKRLK--DVN--VGKRDFEQQMEIVGSIR--HENVVELKAYYYSK---DEKLMVYDY 400 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~--~~~--~~~~~~~~e~~~l~~l~--h~niv~l~~~~~~~---~~~~lv~e~ 400 (625)
+.|+.|.++.||+.... +..+++|+.. ... .....+.+|++++..+. +..+.+++.++.+. +..++||||
T Consensus 44 ~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme~ 122 (359)
T 3dxp_A 44 EQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIMEF 122 (359)
T ss_dssp EECCC-CCSCEEEEECS-SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEEC
T ss_pred EEcCCcccceEEEEEEC-CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEEe
Confidence 34789999999999875 4678888776 332 22457889999999886 45678888888766 458999999
Q ss_pred ccCCChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcC------------------------------------
Q 006922 401 YSLGSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAAN------------------------------------ 444 (625)
Q Consensus 401 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~------------------------------------ 444 (625)
+++..+.+... ..++..++..++.++++.|+.||...
T Consensus 123 v~G~~l~~~~~-------~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (359)
T 3dxp_A 123 VSGRVLWDQSL-------PGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIP 195 (359)
T ss_dssp CCCBCCCCTTC-------TTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCH
T ss_pred cCCeecCCCcc-------ccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCCh
Confidence 99988754221 12678888999999999999999831
Q ss_pred -------------------CCCceecCCCCCCEEeCCCCC--eeEeccccccccc
Q 006922 445 -------------------GGKLVHGNIKSSNIFLNSQQY--GCVSDLGLTTITS 478 (625)
Q Consensus 445 -------------------~~~ivHrDlk~~NIll~~~~~--~kl~DfGla~~~~ 478 (625)
.+.++|+|+++.||+++.++. +.|+||+.+....
T Consensus 196 ~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~g~ 250 (359)
T 3dxp_A 196 AMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTLGH 250 (359)
T ss_dssp HHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEEEC
T ss_pred HHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccccccCC
Confidence 245999999999999997753 5899999987643
No 394
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=98.95 E-value=1.1e-11 Score=133.42 Aligned_cols=153 Identities=19% Similarity=0.114 Sum_probs=115.0
Q ss_pred CeEEEEEcCCCCcccc----cCcccccCCCCccEEEecCCCCCcc----CCcccccccccccccccccccCCCCC-Ccc-
Q 006922 66 KRVVAVRLPGVGFSGL----IPPNTISRLSALKILSLRSNVITGY----FPSDFINLKSLCYLYLQFNNFSGTLP-DFS- 135 (625)
Q Consensus 66 ~~v~~l~l~~~~l~g~----~~~~~~~~l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~- 135 (625)
..++.|+|++|.+.+. +.+..+..+++|++|+|++|.+++. ++..+.++++|++|+|++|.+++..+ .+.
T Consensus 227 ~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~ 306 (461)
T 1z7x_W 227 ASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCE 306 (461)
T ss_dssp TTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHH
T ss_pred CCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHH
Confidence 4588899999988754 2233345689999999999999864 56677789999999999999865332 222
Q ss_pred ----cccccceecCCCccCCCC----CCCCccccccccceecccccccccCCCC-------CCCCCcEEEcccCCCcc--
Q 006922 136 ----VWKNLTIINLSDNGFNGT----IPRSLSNLTQLEALYLANNSLSGKIPDL-------NLPNLQQLNLANNNLSG-- 198 (625)
Q Consensus 136 ----~l~~L~~L~ls~N~l~~~----~p~~l~~l~~L~~L~l~~N~l~~~~p~~-------~l~~L~~L~l~~N~l~g-- 198 (625)
..++|+.|+|++|.+++. ++..+..+++|++|+|++|.+++..+.. ..++|+.|+|++|++++
T Consensus 307 ~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~ 386 (461)
T 1z7x_W 307 TLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSS 386 (461)
T ss_dssp HHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHH
T ss_pred HhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhh
Confidence 236899999999999865 4566777899999999999988653321 26789999999999986
Q ss_pred --ccccccccCCC---CcccCCCCC
Q 006922 199 --SIPQSLKRFPS---SAFVGNSIS 218 (625)
Q Consensus 199 --~~p~~l~~~~~---~~~~~n~~~ 218 (625)
.+|..+..++. +.+.+|.+.
T Consensus 387 ~~~l~~~l~~~~~L~~L~l~~N~i~ 411 (461)
T 1z7x_W 387 CSSLAATLLANHSLRELDLSNNCLG 411 (461)
T ss_dssp HHHHHHHHHHCCCCCEEECCSSSCC
T ss_pred HHHHHHHHHhCCCccEEECCCCCCC
Confidence 77877665554 455666644
No 395
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=98.90 E-value=1.7e-11 Score=131.96 Aligned_cols=151 Identities=19% Similarity=0.209 Sum_probs=113.8
Q ss_pred eEEEEEcCCCCcccc----cCcccccCCCCccEEEecCCCCCccC-----CcccccccccccccccccccCCC----CC-
Q 006922 67 RVVAVRLPGVGFSGL----IPPNTISRLSALKILSLRSNVITGYF-----PSDFINLKSLCYLYLQFNNFSGT----LP- 132 (625)
Q Consensus 67 ~v~~l~l~~~~l~g~----~~~~~~~~l~~L~~L~l~~N~l~~~~-----p~~~~~l~~L~~L~L~~N~l~~~----~p- 132 (625)
+++.|+|++|++++. ++. .+..+++|++|+|++|.+++.. +..+..+++|++|+|++|.++.. ++
T Consensus 200 ~L~~L~L~~n~l~~~~~~~l~~-~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~ 278 (461)
T 1z7x_W 200 QLEALKLESCGVTSDNCRDLCG-IVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCR 278 (461)
T ss_dssp CCCEEECTTSCCBTTHHHHHHH-HHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHH
T ss_pred CceEEEccCCCCcHHHHHHHHH-HHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHH
Confidence 688999999999863 443 4788999999999999987532 22334689999999999999863 33
Q ss_pred CcccccccceecCCCccCCCCCCCCccc-----cccccceeccccccccc----CCCC--CCCCCcEEEcccCCCccccc
Q 006922 133 DFSVWKNLTIINLSDNGFNGTIPRSLSN-----LTQLEALYLANNSLSGK----IPDL--NLPNLQQLNLANNNLSGSIP 201 (625)
Q Consensus 133 ~~~~l~~L~~L~ls~N~l~~~~p~~l~~-----l~~L~~L~l~~N~l~~~----~p~~--~l~~L~~L~l~~N~l~g~~p 201 (625)
.+..+++|++|+|++|.+++..+..+.. .++|+.|+|++|.+++. ++.. .+++|+.|+|++|++++..+
T Consensus 279 ~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~ 358 (461)
T 1z7x_W 279 VLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGV 358 (461)
T ss_dssp HHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHH
T ss_pred HHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccH
Confidence 4677899999999999997544433432 26999999999999865 2322 57899999999999987655
Q ss_pred cccc--------cCCCCcccCCCCC
Q 006922 202 QSLK--------RFPSSAFVGNSIS 218 (625)
Q Consensus 202 ~~l~--------~~~~~~~~~n~~~ 218 (625)
..+. .+..+.+.+|.+.
T Consensus 359 ~~l~~~l~~~~~~L~~L~L~~n~i~ 383 (461)
T 1z7x_W 359 RELCQGLGQPGSVLRVLWLADCDVS 383 (461)
T ss_dssp HHHHHHHTSTTCCCCEEECTTSCCC
T ss_pred HHHHHHHcCCCCceEEEECCCCCCC
Confidence 5443 4555666666543
No 396
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.80 E-value=2.3e-09 Score=108.81 Aligned_cols=181 Identities=16% Similarity=0.178 Sum_probs=118.7
Q ss_pred HcccCCceeEEEEEEcCCcEEEEEEeccccCChHHHHHHHHHHHcC-CCCc--eecceeEEEecC---ceEEEEEeccCC
Q 006922 331 VLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSI-RHEN--VVELKAYYYSKD---EKLMVYDYYSLG 404 (625)
Q Consensus 331 ~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l-~h~n--iv~l~~~~~~~~---~~~lv~e~~~~g 404 (625)
.++.|.+..||+.. ..+++|+-... .....+.+|++++..+ .+.. +.+.+.+....+ ..++||++++|.
T Consensus 27 ~~~~G~~n~v~~v~----~~~vlR~~~~~-~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~G~ 101 (304)
T 3sg8_A 27 ISGEGNDCIAYEIN----RDFIFKFPKHS-RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIKGV 101 (304)
T ss_dssp EEEECSSEEEEEST----TSEEEEEESSH-HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCCCE
T ss_pred ecCCCCcceEEEEC----CEEEEEecCCc-chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccCCe
Confidence 47889999999863 56888876532 2235788999999887 3333 333444433322 347899999998
Q ss_pred ChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcC----------------------------------------
Q 006922 405 SVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAAN---------------------------------------- 444 (625)
Q Consensus 405 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~---------------------------------------- 444 (625)
++...... .++..++..++.++++.++.||...
T Consensus 102 ~l~~~~~~-------~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 174 (304)
T 3sg8_A 102 PLTPLLLN-------NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVD 174 (304)
T ss_dssp ECCHHHHH-------TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHH
T ss_pred ECCccccc-------cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHH
Confidence 88653321 2667778888888888888888611
Q ss_pred ---------------CCCceecCCCCCCEEeCC--CCCeeEecccccccccccccccccCCCc---CCccccC------C
Q 006922 445 ---------------GGKLVHGNIKSSNIFLNS--QQYGCVSDLGLTTITSALAPVIARAAGY---RAPEVTD------S 498 (625)
Q Consensus 445 ---------------~~~ivHrDlk~~NIll~~--~~~~kl~DfGla~~~~~~~~~~~~~~~y---~aPE~~~------~ 498 (625)
.+.++|+|+++.||+++. ...+.|+||+.+........ ......+ ..|+... +
T Consensus 175 ~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~D-l~~~~~~~~~~~~~~~~~~l~~Y~ 253 (304)
T 3sg8_A 175 DFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDND-FISLMEDDEEYGMEFVSKILNHYK 253 (304)
T ss_dssp HHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHH-HHTTCCTTTSCCHHHHHHHHHHHT
T ss_pred HHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHH-HHHHHhhccccCHHHHHHHHHHcC
Confidence 134899999999999998 45678999998875432111 0111111 1222110 0
Q ss_pred --------CCCCCccchhhhHHHHHHHHhCCCCC
Q 006922 499 --------RKATQASDVYSFGVVLLEILTGKSPI 524 (625)
Q Consensus 499 --------~~~~~~~DvwS~Gvil~elltG~~p~ 524 (625)
.+.....+.|++|.++|++.+|+.+|
T Consensus 254 ~~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 254 HKDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHH
Confidence 01122368999999999999998876
No 397
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.73 E-value=1.2e-10 Score=121.61 Aligned_cols=107 Identities=22% Similarity=0.166 Sum_probs=47.3
Q ss_pred CCccEEEecCCCCCccCCccc-ccccccccccccccccCCCCC-Cc-----ccccccceecCCCccCCC----CCCCCcc
Q 006922 91 SALKILSLRSNVITGYFPSDF-INLKSLCYLYLQFNNFSGTLP-DF-----SVWKNLTIINLSDNGFNG----TIPRSLS 159 (625)
Q Consensus 91 ~~L~~L~l~~N~l~~~~p~~~-~~l~~L~~L~L~~N~l~~~~p-~~-----~~l~~L~~L~ls~N~l~~----~~p~~l~ 159 (625)
++|+.|+|++|.|+......+ ..+++|+.|+|++|.++.... .+ ...++|+.|+|++|.|+. .++..+.
T Consensus 101 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~ 180 (372)
T 3un9_A 101 HALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLA 180 (372)
T ss_dssp SCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHH
T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHh
Confidence 455555555555543211111 234455555555555542111 11 123445555555555542 1222234
Q ss_pred ccccccceecccccccccC----CC--CCCCCCcEEEcccCCCc
Q 006922 160 NLTQLEALYLANNSLSGKI----PD--LNLPNLQQLNLANNNLS 197 (625)
Q Consensus 160 ~l~~L~~L~l~~N~l~~~~----p~--~~l~~L~~L~l~~N~l~ 197 (625)
.+++|++|+|++|.|++.- .. ...++|+.|+|++|.|+
T Consensus 181 ~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~ 224 (372)
T 3un9_A 181 GNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAG 224 (372)
T ss_dssp TCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCC
T ss_pred cCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCC
Confidence 4455555555555554211 11 02345555555555554
No 398
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.65 E-value=4.1e-08 Score=100.65 Aligned_cols=139 Identities=15% Similarity=0.154 Sum_probs=82.7
Q ss_pred eEEEEEcCCCCcccccCcccccCCCCccEEEecCCCCCccCCcccccccccccccccccccC---CCCC--Cc-------
Q 006922 67 RVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFS---GTLP--DF------- 134 (625)
Q Consensus 67 ~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~---~~~p--~~------- 134 (625)
.++.|+|+. ++. .|++..|.++++|+.|+|++|.+....+..|.++.++..|.+..+... ..+. .|
T Consensus 102 ~L~~l~L~~-~i~-~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~ 179 (329)
T 3sb4_A 102 TLEKVILSE-KIK-NIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLE 179 (329)
T ss_dssp TCCC-CBCT-TCC-EECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCE
T ss_pred CCcEEECCc-ccc-chhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccc
Confidence 477788887 665 577778999999999999999887666666666555555554442110 0000 00
Q ss_pred -------------------------------------------ccccccceecCCCccCCCCCCCCccccccccceeccc
Q 006922 135 -------------------------------------------SVWKNLTIINLSDNGFNGTIPRSLSNLTQLEALYLAN 171 (625)
Q Consensus 135 -------------------------------------------~~l~~L~~L~ls~N~l~~~~p~~l~~l~~L~~L~l~~ 171 (625)
..+++|+.|+|++|+++..-+..|.++++|+.|+|.+
T Consensus 180 ~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~ 259 (329)
T 3sb4_A 180 TTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPH 259 (329)
T ss_dssp EEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCT
T ss_pred eeEEecCCCcHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCc
Confidence 0155677777777777644445567777777777776
Q ss_pred ccccccCCCC--CCCCCc-EEEcccCCCccccccccccCCC
Q 006922 172 NSLSGKIPDL--NLPNLQ-QLNLANNNLSGSIPQSLKRFPS 209 (625)
Q Consensus 172 N~l~~~~p~~--~l~~L~-~L~l~~N~l~g~~p~~l~~~~~ 209 (625)
| ++...+.. .+++|+ .|++.+ .++..-+.++..+++
T Consensus 260 n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~ 298 (329)
T 3sb4_A 260 N-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDN 298 (329)
T ss_dssp T-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTT
T ss_pred c-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCcc
Confidence 6 54332221 566666 777666 555333345555444
No 399
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.61 E-value=4.2e-10 Score=117.51 Aligned_cols=141 Identities=20% Similarity=0.190 Sum_probs=105.1
Q ss_pred CeEEEEEcCCCCcccccCcccccCCCCccEEEecCCCCCccCCccc-----ccccccccccccccccCCC----CC-Ccc
Q 006922 66 KRVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPSDF-----INLKSLCYLYLQFNNFSGT----LP-DFS 135 (625)
Q Consensus 66 ~~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~-----~~l~~L~~L~L~~N~l~~~----~p-~~~ 135 (625)
..++.|+|++|.++..-.......+++|+.|+|++|.|+......+ ...++|++|+|++|.++.. ++ .+.
T Consensus 101 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~ 180 (372)
T 3un9_A 101 HALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLA 180 (372)
T ss_dssp SCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHH
T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHh
Confidence 4699999999998754333334457789999999999985433333 2457899999999998642 22 346
Q ss_pred cccccceecCCCccCCCC----CCCCccccccccceecccccccccC----CCC--CCCCCcEEEcccCCCccccccccc
Q 006922 136 VWKNLTIINLSDNGFNGT----IPRSLSNLTQLEALYLANNSLSGKI----PDL--NLPNLQQLNLANNNLSGSIPQSLK 205 (625)
Q Consensus 136 ~l~~L~~L~ls~N~l~~~----~p~~l~~l~~L~~L~l~~N~l~~~~----p~~--~l~~L~~L~l~~N~l~g~~p~~l~ 205 (625)
..++|++|+|++|.|++. ++..+..+++|+.|+|++|.|++.- ... ..++|+.|+|++|.|+..-...+.
T Consensus 181 ~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L~ 260 (372)
T 3un9_A 181 GNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSEGRQVLR 260 (372)
T ss_dssp TCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHHHHHHHH
T ss_pred cCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHHHHHHHH
Confidence 788999999999999752 3455677789999999999997532 111 468899999999999865555554
Q ss_pred c
Q 006922 206 R 206 (625)
Q Consensus 206 ~ 206 (625)
.
T Consensus 261 ~ 261 (372)
T 3un9_A 261 D 261 (372)
T ss_dssp H
T ss_pred H
Confidence 4
No 400
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.44 E-value=1.3e-07 Score=96.81 Aligned_cols=129 Identities=15% Similarity=0.110 Sum_probs=91.5
Q ss_pred ccCcccccC--------CCCccEEEecCCCCCccCCcccccccccccccccccccCCCCC-CcccccccceecCCCccC-
Q 006922 81 LIPPNTISR--------LSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSGTLP-DFSVWKNLTIINLSDNGF- 150 (625)
Q Consensus 81 ~~~~~~~~~--------l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~ls~N~l- 150 (625)
.||+..|.+ +++|+.|+|.+ .++..-+..|.++++|+.|+|+.|.+....+ .|..+.++..+.++.+..
T Consensus 83 ~I~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~ 161 (329)
T 3sb4_A 83 FVPAYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAY 161 (329)
T ss_dssp EECTTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHH
T ss_pred ccCHHHhcccccccccccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhh
Confidence 466677888 99999999999 8888777889999999999999999874444 577777777776655221
Q ss_pred ---CCCCCCCc--------------------------------------------------cccccccceeccccccccc
Q 006922 151 ---NGTIPRSL--------------------------------------------------SNLTQLEALYLANNSLSGK 177 (625)
Q Consensus 151 ---~~~~p~~l--------------------------------------------------~~l~~L~~L~l~~N~l~~~ 177 (625)
...-...| ..+++|+.|+|++|+++..
T Consensus 162 ~~~~~i~~~~f~~~~~L~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I 241 (329)
T 3sb4_A 162 RFKNRWEHFAFIEGEPLETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTI 241 (329)
T ss_dssp HTSTTTTTSCEEESCCCEEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEE
T ss_pred hccccccccccccccccceeEEecCCCcHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCccee
Confidence 00000001 0267999999999999855
Q ss_pred CCCC--CCCCCcEEEcccCCCccccccccccCCCCc
Q 006922 178 IPDL--NLPNLQQLNLANNNLSGSIPQSLKRFPSSA 211 (625)
Q Consensus 178 ~p~~--~l~~L~~L~l~~N~l~g~~p~~l~~~~~~~ 211 (625)
.+.. .+++|+.|+|.+| ++..-+.++..++++.
T Consensus 242 ~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~ 276 (329)
T 3sb4_A 242 PDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLA 276 (329)
T ss_dssp CTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCC
T ss_pred cHhhhhCCCCCCEEECCcc-cceehHHHhhCChhcc
Confidence 4443 7899999999998 7643345666666554
No 401
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.42 E-value=4.3e-07 Score=92.67 Aligned_cols=133 Identities=14% Similarity=0.165 Sum_probs=96.8
Q ss_pred hHcccCCceeEEEEEEcCCcEEEEEEeccccCChHHHHHHHHHHHcCCC----CceecceeEEEecCceEEEEEeccCCC
Q 006922 330 EVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRH----ENVVELKAYYYSKDEKLMVYDYYSLGS 405 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h----~niv~l~~~~~~~~~~~lv~e~~~~g~ 405 (625)
+.++.|....||+. |..+++|+..... ....+.+|.+++..+.+ ..+.+++++ +..++||||++|.+
T Consensus 43 ~~l~~G~~n~vy~v----g~~~vlR~~~~~~-~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme~i~G~~ 113 (320)
T 3r70_A 43 RYLSSGDDSDTFLC----NEQYVVKVPKRDS-VRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMKYIKGER 113 (320)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEESSHH-HHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEECCCCBC
T ss_pred EeCCCCCCceEEEE----CCEEEEEeCCcHH-HHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEeecCCcc
Confidence 35789999999998 6678888764322 13458899988888765 123344444 56789999999988
Q ss_pred hhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCC----------------------------------------
Q 006922 406 VSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANG---------------------------------------- 445 (625)
Q Consensus 406 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~---------------------------------------- 445 (625)
+...... .++..++..++.++++.++.||....
T Consensus 114 l~~~~~~-------~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (320)
T 3r70_A 114 ITYEQYH-------KLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDEML 186 (320)
T ss_dssp CCHHHHT-------TSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHHHH
T ss_pred ccccccc-------cCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccccccch
Confidence 8643321 25666777888888888888885432
Q ss_pred --------------------CCceecCCCCCCEEeCCCCCeeEeccccccccc
Q 006922 446 --------------------GKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITS 478 (625)
Q Consensus 446 --------------------~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~ 478 (625)
+.++|+|+++.||+++.+..+.|+||+.+....
T Consensus 187 ~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~~ 239 (320)
T 3r70_A 187 EHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVGD 239 (320)
T ss_dssp HHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEEC
T ss_pred HHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccCC
Confidence 235999999999999986667899999886543
No 402
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.36 E-value=1.3e-07 Score=93.06 Aligned_cols=111 Identities=24% Similarity=0.275 Sum_probs=70.7
Q ss_pred cccccCcccccCCCCccE--EEecCCCCC---ccCCcccccccccccccccccccCC--CCC-CcccccccceecCCCcc
Q 006922 78 FSGLIPPNTISRLSALKI--LSLRSNVIT---GYFPSDFINLKSLCYLYLQFNNFSG--TLP-DFSVWKNLTIINLSDNG 149 (625)
Q Consensus 78 l~g~~~~~~~~~l~~L~~--L~l~~N~l~---~~~p~~~~~l~~L~~L~L~~N~l~~--~~p-~~~~l~~L~~L~ls~N~ 149 (625)
.++.+.-+.|...+.|.. ++++.|... +.++....++++|+.|+|++|+|++ .+| .+..+++|+.|+|++|+
T Consensus 128 ~~~~LdLs~l~~dp~L~~~~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~ 207 (267)
T 3rw6_A 128 SQQALDLKGLRSDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNE 207 (267)
T ss_dssp TTTEEECTTGGGCHHHHHTTCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSC
T ss_pred hccccCHHHcCCCcchhhcCccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCc
Confidence 334444333555555665 667777433 2222222457788888888888876 333 24577888888888888
Q ss_pred CCCCCCCCccccc--cccceecccccccccCCCC---------CCCCCcEEE
Q 006922 150 FNGTIPRSLSNLT--QLEALYLANNSLSGKIPDL---------NLPNLQQLN 190 (625)
Q Consensus 150 l~~~~p~~l~~l~--~L~~L~l~~N~l~~~~p~~---------~l~~L~~L~ 190 (625)
|++. ..+..+. +|++|+|++|.+++.+|+. .+++|+.||
T Consensus 208 i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 208 LKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp CCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred cCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 8754 3344444 7888888888888777631 577887776
No 403
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.30 E-value=1.2e-08 Score=113.44 Aligned_cols=113 Identities=18% Similarity=0.147 Sum_probs=62.6
Q ss_pred ccCCCCccEEEecCCCCCccCCccccc-cccccccccc----ccccCCCCCC------cccccccceecCCCc--cCCCC
Q 006922 87 ISRLSALKILSLRSNVITGYFPSDFIN-LKSLCYLYLQ----FNNFSGTLPD------FSVWKNLTIINLSDN--GFNGT 153 (625)
Q Consensus 87 ~~~l~~L~~L~l~~N~l~~~~p~~~~~-l~~L~~L~L~----~N~l~~~~p~------~~~l~~L~~L~ls~N--~l~~~ 153 (625)
+..+++|++|+++.|.+++..+..+.. +++|+.|+|+ .|++++.+.+ +..+++|+.|+|++| .+++.
T Consensus 374 ~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~ 453 (592)
T 3ogk_B 374 AQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDL 453 (592)
T ss_dssp HHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHH
T ss_pred HhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHH
Confidence 345677777777777776655445544 6667777775 5556543211 344666666666532 24443
Q ss_pred CCCCcc-ccccccceeccccccccc-CCC--CCCCCCcEEEcccCCCccc
Q 006922 154 IPRSLS-NLTQLEALYLANNSLSGK-IPD--LNLPNLQQLNLANNNLSGS 199 (625)
Q Consensus 154 ~p~~l~-~l~~L~~L~l~~N~l~~~-~p~--~~l~~L~~L~l~~N~l~g~ 199 (625)
.+..+. .+++|+.|+|++|++++. ++. ..+++|+.|+|++|++++.
T Consensus 454 ~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~ 503 (592)
T 3ogk_B 454 GLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSER 503 (592)
T ss_dssp HHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHH
T ss_pred HHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHH
Confidence 333332 255666666666666541 222 1456666666666666543
No 404
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.29 E-value=5.1e-06 Score=83.18 Aligned_cols=140 Identities=15% Similarity=0.190 Sum_probs=91.8
Q ss_pred hHcccCCceeEEEEEEcCCcEEEEEEecccc-CChHHHHHHHHHHHcCCCC---ceecceeEEEecCceEEEEEeccCCC
Q 006922 330 EVLGKGTFGMAYKAILEDGTTVVVKRLKDVN-VGKRDFEQQMEIVGSIRHE---NVVELKAYYYSKDEKLMVYDYYSLGS 405 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~-~~~~~~~~e~~~l~~l~h~---niv~l~~~~~~~~~~~lv~e~~~~g~ 405 (625)
+.|+.|.++.||++...+|+.+++|+..... .....+.+|++.|+.+++. .+.+++++. ..++||||++++.
T Consensus 21 ~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g~~ 96 (288)
T 3d1u_A 21 AERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDERP 96 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCCCC
T ss_pred eeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEecccCC
Confidence 3588999999999998889999999975432 2346789999999999765 466777663 4689999999987
Q ss_pred hhh-----------hhccccCCC----------------CccCCHHHHHH---H-----------------HHHHHHHHH
Q 006922 406 VSA-----------MLHSERGEG----------------RIPLDWDTRMR---I-----------------AIGAARGIA 438 (625)
Q Consensus 406 L~~-----------~l~~~~~~~----------------~~~l~~~~~~~---i-----------------~~~ia~~l~ 438 (625)
+.. .+|...... .-.-+|..... + ...+-+.++
T Consensus 97 ~~~~~~~~lg~~LA~LH~~~~~~fG~~~~~~~G~~~q~~~w~~~W~~f~~~~rl~~~l~~a~~~~~~~~~~~~~~~~l~~ 176 (288)
T 3d1u_A 97 PTPEAAERFGHQLAAMHLAGAESFGATWDGYIGPLPMDNTPRSTWPEFYAEQRILPYLRRAADRGALTPGDVRLVEKVLD 176 (288)
T ss_dssp CCHHHHHHHHHHHHHHHHTCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHHTHHHHHHHHHTTSSCHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHcCCCCccCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHH
Confidence 532 233321110 00124543211 0 111112223
Q ss_pred HHH----hcCCCCceecCCCCCCEEeCCCCCeeEecccccc
Q 006922 439 RIH----AANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTT 475 (625)
Q Consensus 439 ~LH----~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~ 475 (625)
.+. ....+.++|+|+.+.||+++. +.+.|+|| .+.
T Consensus 177 ~l~~~l~~~~~~~l~HgD~~~~N~l~~~-~~~~~iD~-~~~ 215 (288)
T 3d1u_A 177 ALDHLAGDPEPPARIHGDLWNGNVLWQD-DGAVVIDP-AAH 215 (288)
T ss_dssp THHHHTCSCCCCEEECSCCSGGGEEEET-TEEEECSC-CCE
T ss_pred HHHHHhcCCCCCcceECCCCcCcEEEeC-CCeEEEcC-CcC
Confidence 332 123456999999999999988 45889999 554
No 405
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.28 E-value=3e-06 Score=85.73 Aligned_cols=135 Identities=18% Similarity=0.184 Sum_probs=90.9
Q ss_pred HcccCCceeEEEEEEcCCcEEEEEEeccccCChHHHHHHHHHHHcCCCC---ceecceeEEE-ecCceEEEEEeccCCCh
Q 006922 331 VLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHE---NVVELKAYYY-SKDEKLMVYDYYSLGSV 406 (625)
Q Consensus 331 ~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~---niv~l~~~~~-~~~~~~lv~e~~~~g~L 406 (625)
.++.|....||+. |..+++|+-.. ......+.+|++++..+.+. .+.+.+.++. ..+..++||||++|..+
T Consensus 26 ~l~~G~~n~v~~v----g~~~VlR~~~~-~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~~l 100 (306)
T 3tdw_A 26 SLGEGFRNYAILV----NGDWVFRFPKS-QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQIL 100 (306)
T ss_dssp EEEECSSEEEEEE----TTTEEEEEESS-HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSEEC
T ss_pred ecCCCcceeEEEE----CCEEEEEecCC-chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCeEC
Confidence 4778888899988 56788887432 12235788999999988642 3455666664 34567899999999887
Q ss_pred hhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhc-------------------------------------------
Q 006922 407 SAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAA------------------------------------------- 443 (625)
Q Consensus 407 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~------------------------------------------- 443 (625)
...... .++...+..++.++++.|+.||..
T Consensus 101 ~~~~~~-------~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~ 173 (306)
T 3tdw_A 101 GEDGMA-------VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLT 173 (306)
T ss_dssp HHHHHT-------TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHH
T ss_pred chhhhh-------hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHH
Confidence 653211 133444445555555555555542
Q ss_pred --------------CCCCceecCCCCCCEEeCC---CCCe-eEecccccccc
Q 006922 444 --------------NGGKLVHGNIKSSNIFLNS---QQYG-CVSDLGLTTIT 477 (625)
Q Consensus 444 --------------~~~~ivHrDlk~~NIll~~---~~~~-kl~DfGla~~~ 477 (625)
..+.++|+|+++.||+++. ++.+ .|+||+.+...
T Consensus 174 ~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~g 225 (306)
T 3tdw_A 174 LRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAIS 225 (306)
T ss_dssp HHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEE
T ss_pred HHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCC
Confidence 2234699999999999987 4554 79999987654
No 406
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.26 E-value=7.2e-08 Score=107.05 Aligned_cols=139 Identities=12% Similarity=0.036 Sum_probs=89.4
Q ss_pred eEEEEEcCCCC-cccccCcccccCCCCccEEEecCCCCCcc----CCcccccccccccccccccccCCCC----C-Cccc
Q 006922 67 RVVAVRLPGVG-FSGLIPPNTISRLSALKILSLRSNVITGY----FPSDFINLKSLCYLYLQFNNFSGTL----P-DFSV 136 (625)
Q Consensus 67 ~v~~l~l~~~~-l~g~~~~~~~~~l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~----p-~~~~ 136 (625)
.++.|+|.++. ++..-.+..+..+++|++|+|++|.+++. ++..+.++++|++|+|++|.+++.. + -+..
T Consensus 139 ~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~ 218 (592)
T 3ogk_B 139 DLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARN 218 (592)
T ss_dssp GCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHH
T ss_pred cCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhh
Confidence 37888887765 22111112244788999999999988764 3334567788999999999887432 2 2456
Q ss_pred ccccceecCCCccCCCCCCCCccccccccceecccccccc---cCCC--CCCCCCcEEEcccCCCccccccccccC
Q 006922 137 WKNLTIINLSDNGFNGTIPRSLSNLTQLEALYLANNSLSG---KIPD--LNLPNLQQLNLANNNLSGSIPQSLKRF 207 (625)
Q Consensus 137 l~~L~~L~ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~---~~p~--~~l~~L~~L~l~~N~l~g~~p~~l~~~ 207 (625)
+++|+.|+|++|.+.+ +|..+..+++|+.|+++.+.... ..+. ..+++|+.|+++++.. +.+|..+..+
T Consensus 219 ~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~-~~l~~~~~~~ 292 (592)
T 3ogk_B 219 CRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGP-NEMPILFPFA 292 (592)
T ss_dssp CTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCT-TTGGGGGGGG
T ss_pred CCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCccccch-hHHHHHHhhc
Confidence 7889999999988875 56677788888888887533221 1111 1456777777776533 3455544433
No 407
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.22 E-value=4.2e-06 Score=82.81 Aligned_cols=135 Identities=16% Similarity=0.193 Sum_probs=93.6
Q ss_pred cccCCce-eEEEEEEc-CCcEEEEEEeccccCChHHHHHHHHHHHcCC-CCceecceeEEEecCceEEEEEeccCCChhh
Q 006922 332 LGKGTFG-MAYKAILE-DGTTVVVKRLKDVNVGKRDFEQQMEIVGSIR-HENVVELKAYYYSKDEKLMVYDYYSLGSVSA 408 (625)
Q Consensus 332 lg~G~~g-~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~ 408 (625)
+..|..| .||+.... ++..+++|+-... ...++.+|++.|+.+. +--+.++++++.+.+..++|||++++.++.+
T Consensus 32 ~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~--~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~~ 109 (272)
T 4gkh_A 32 DNVGQSGATIYRLYGKPNAPELFLKHGKGS--VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAFQ 109 (272)
T ss_dssp EECSSSSCEEEEEECCTTCCCEEEEEEETH--HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEHHH
T ss_pred ccCCCcCCeEEEEEecCCCeEEEEEECCCC--CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccccc
Confidence 3445554 68987744 5678899976542 2356888999888774 3346778899998899999999999988766
Q ss_pred hhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcC--------------------------------------------
Q 006922 409 MLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAAN-------------------------------------------- 444 (625)
Q Consensus 409 ~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~-------------------------------------------- 444 (625)
...... .....+..++++.|+.||...
T Consensus 110 ~~~~~~---------~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (272)
T 4gkh_A 110 VLEEYP---------DSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVW 180 (272)
T ss_dssp HHHHCG---------GGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHH
T ss_pred cccCCH---------HHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHH
Confidence 543211 122345555556666665421
Q ss_pred -----------CCCceecCCCCCCEEeCCCCCeeEecccccccc
Q 006922 445 -----------GGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTIT 477 (625)
Q Consensus 445 -----------~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~ 477 (625)
.+.++|+|+.+.|||++.++.+-|+||+.+...
T Consensus 181 ~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~g 224 (272)
T 4gkh_A 181 KEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGIA 224 (272)
T ss_dssp HHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEEE
T ss_pred HHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccccC
Confidence 113799999999999998776779999977643
No 408
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.15 E-value=5.6e-06 Score=85.56 Aligned_cols=78 Identities=10% Similarity=0.062 Sum_probs=55.7
Q ss_pred Hc-ccCCceeEEEEEEc-------CCcEEEEEEecccc---C-ChHHHHHHHHHHHcCC-C--CceecceeEEEec---C
Q 006922 331 VL-GKGTFGMAYKAILE-------DGTTVVVKRLKDVN---V-GKRDFEQQMEIVGSIR-H--ENVVELKAYYYSK---D 392 (625)
Q Consensus 331 ~l-g~G~~g~Vy~~~~~-------~g~~vavK~l~~~~---~-~~~~~~~e~~~l~~l~-h--~niv~l~~~~~~~---~ 392 (625)
.| +.|....+|+.... ++..+++|+-.... . ....+.+|++++..+. + -.+.+++.++.+. +
T Consensus 27 ~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~g 106 (357)
T 3ats_A 27 GVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVLG 106 (357)
T ss_dssp EECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTTS
T ss_pred ECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCccC
Confidence 46 78889999998754 26788888765432 1 2356888999888874 3 3466777777654 3
Q ss_pred ceEEEEEeccCCChhh
Q 006922 393 EKLMVYDYYSLGSVSA 408 (625)
Q Consensus 393 ~~~lv~e~~~~g~L~~ 408 (625)
..++||||++|..+.+
T Consensus 107 ~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 107 TPFFLMDYVEGVVPPD 122 (357)
T ss_dssp SCEEEEECCCCBCCCB
T ss_pred CceEEEEecCCCChhh
Confidence 5689999999877654
No 409
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.12 E-value=9.3e-08 Score=89.29 Aligned_cols=112 Identities=13% Similarity=0.121 Sum_probs=81.1
Q ss_pred cccCCCCccEEEecCC-CCCcc----CCcccccccccccccccccccCCC----CC-CcccccccceecCCCccCCCC--
Q 006922 86 TISRLSALKILSLRSN-VITGY----FPSDFINLKSLCYLYLQFNNFSGT----LP-DFSVWKNLTIINLSDNGFNGT-- 153 (625)
Q Consensus 86 ~~~~l~~L~~L~l~~N-~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~----~p-~~~~l~~L~~L~ls~N~l~~~-- 153 (625)
.+...++|++|+|++| .|... +...+...++|++|+|++|.+... +. .+...++|++|+|++|.|+..
T Consensus 31 ~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~ 110 (185)
T 1io0_A 31 IQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGI 110 (185)
T ss_dssp HHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHH
T ss_pred HHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHH
Confidence 4677888999999998 88632 223455668899999999988632 11 244557899999999998753
Q ss_pred --CCCCccccccccceec--ccccccccC----CCC--CCCCCcEEEcccCCCc
Q 006922 154 --IPRSLSNLTQLEALYL--ANNSLSGKI----PDL--NLPNLQQLNLANNNLS 197 (625)
Q Consensus 154 --~p~~l~~l~~L~~L~l--~~N~l~~~~----p~~--~l~~L~~L~l~~N~l~ 197 (625)
+...+...++|++|+| ++|.|+..- ... ..++|+.|+|++|.+.
T Consensus 111 ~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 111 LALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 3456677788999999 789887421 111 4578999999999885
No 410
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.09 E-value=1e-05 Score=83.77 Aligned_cols=143 Identities=11% Similarity=0.065 Sum_probs=89.1
Q ss_pred HcccCCceeEEEEEEcCCcEEEEEEeccccCChHHHHHHHHHHHcCCCCc--eecceeEEEec-CceEEEEEeccCCChh
Q 006922 331 VLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHEN--VVELKAYYYSK-DEKLMVYDYYSLGSVS 407 (625)
Q Consensus 331 ~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~n--iv~l~~~~~~~-~~~~lv~e~~~~g~L~ 407 (625)
.++.|....+|+... +|..+++|.-... ..+.+|+.++..+.... +.++++++... +..++||||+++..+.
T Consensus 48 ~l~gG~~n~~y~v~~-~g~~~vlK~~~~~----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G~~l~ 122 (362)
T 3ovc_A 48 QLSEGEESRAFSFDV-GGRGYVLRVNSCA----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQGVTLQ 122 (362)
T ss_dssp EEEECSSEEEEEEEE-TTEEEEEEEESCC----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCSEETT
T ss_pred ECCCCCcceEEEEEE-CCcEEEEEeCCch----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCCCCcc
Confidence 478899999999876 5788999977542 36888999888876433 45667776654 5689999999986654
Q ss_pred hh------------------hccccCCC-----------C-ccCCHHHH---------------------HHHHHHHHHH
Q 006922 408 AM------------------LHSERGEG-----------R-IPLDWDTR---------------------MRIAIGAARG 436 (625)
Q Consensus 408 ~~------------------l~~~~~~~-----------~-~~l~~~~~---------------------~~i~~~ia~~ 436 (625)
+. +|...... . ..-+|... ......+.+.
T Consensus 123 ~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l 202 (362)
T 3ovc_A 123 DLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSASVAQALDEL 202 (362)
T ss_dssp TSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhcccccchHHHHHH
Confidence 21 11110000 0 00112111 0111122222
Q ss_pred HHHHHhcC-CCCceecCCCCCCEEeCCCCCeeEeccccccccc
Q 006922 437 IARIHAAN-GGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITS 478 (625)
Q Consensus 437 l~~LH~~~-~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~ 478 (625)
++++.... .+.++|+|+.+.||+++.++.+.|+||+.+....
T Consensus 203 ~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~gd 245 (362)
T 3ovc_A 203 MLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMFGD 245 (362)
T ss_dssp HHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEEEC
T ss_pred HHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCcccccCC
Confidence 23332211 2458999999999999877777899999887543
No 411
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.05 E-value=1.2e-07 Score=105.18 Aligned_cols=63 Identities=16% Similarity=0.140 Sum_probs=30.5
Q ss_pred ccccccceecCCCccCCCCCCCCccc-cccccceecccccccccCCC---CCCCCCcEEEcccCCCcc
Q 006922 135 SVWKNLTIINLSDNGFNGTIPRSLSN-LTQLEALYLANNSLSGKIPD---LNLPNLQQLNLANNNLSG 198 (625)
Q Consensus 135 ~~l~~L~~L~ls~N~l~~~~p~~l~~-l~~L~~L~l~~N~l~~~~p~---~~l~~L~~L~l~~N~l~g 198 (625)
..+++|+.|+|++ .+++..+..+.. +++|+.|+|++|.+++.... ..+++|+.|+|++|++++
T Consensus 429 ~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~ 495 (594)
T 2p1m_B 429 EHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGD 495 (594)
T ss_dssp HHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCH
T ss_pred hhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcH
Confidence 3445555555544 443332223332 45566666666655432221 135556666666666643
No 412
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.98 E-value=2.6e-05 Score=79.80 Aligned_cols=141 Identities=16% Similarity=0.190 Sum_probs=80.5
Q ss_pred cccCCceeEEEEEEcCCcEEEEEEeccccCChHHHHHHHHHHHcCC-----CCceecce-e--EEEecCceEEEEEeccC
Q 006922 332 LGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIR-----HENVVELK-A--YYYSKDEKLMVYDYYSL 403 (625)
Q Consensus 332 lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~-----h~niv~l~-~--~~~~~~~~~lv~e~~~~ 403 (625)
|+.|..+.||+....+| .+++|+.... ......|++++..+. .|.++... | +....+..++||+|++|
T Consensus 40 l~gG~~n~~~~v~~~~~-~~vlk~~~~~---~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~i~G 115 (346)
T 2q83_A 40 IQGNQMALVWKVHTDSG-AVCLKRIHRP---EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDWIEG 115 (346)
T ss_dssp CC----CEEEEEEETTE-EEEEEEECSC---HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEECCCC
T ss_pred ccccccCcEEEEEeCCC-CEEEEecCCC---HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEeecC
Confidence 56677889999987655 5889988752 334445555555442 34444311 1 12345677899999998
Q ss_pred CChh--------------hhhccccCCC---------CccCCHHHHH-------------------------------HH
Q 006922 404 GSVS--------------AMLHSERGEG---------RIPLDWDTRM-------------------------------RI 429 (625)
Q Consensus 404 g~L~--------------~~l~~~~~~~---------~~~l~~~~~~-------------------------------~i 429 (625)
..+. ..+|...... ...-.|.... .+
T Consensus 116 ~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (346)
T 2q83_A 116 RPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEIDGF 195 (346)
T ss_dssp BCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHH
T ss_pred ccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHH
Confidence 6543 1122211100 0112343211 11
Q ss_pred HHHHHHHHHHHHh----------cCCCCceecCCCCCCEEeCCCCCeeEeccccccc
Q 006922 430 AIGAARGIARIHA----------ANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTI 476 (625)
Q Consensus 430 ~~~ia~~l~~LH~----------~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~ 476 (625)
...+.+++++|+. ...+.++|+|+++.||+++.++.+.|+||+.+..
T Consensus 196 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~ 252 (346)
T 2q83_A 196 IEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF 252 (346)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred HHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence 1123446666763 1234599999999999998888999999997653
No 413
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=97.98 E-value=3e-07 Score=101.94 Aligned_cols=122 Identities=22% Similarity=0.257 Sum_probs=75.4
Q ss_pred cCCCCccEEEecCCCCCccCCcccc-ccccccccccccc-ccCCC-CCC-cccccccceecCCCccCCCCCCCCc----c
Q 006922 88 SRLSALKILSLRSNVITGYFPSDFI-NLKSLCYLYLQFN-NFSGT-LPD-FSVWKNLTIINLSDNGFNGTIPRSL----S 159 (625)
Q Consensus 88 ~~l~~L~~L~l~~N~l~~~~p~~~~-~l~~L~~L~L~~N-~l~~~-~p~-~~~l~~L~~L~ls~N~l~~~~p~~l----~ 159 (625)
..+++|+.|+|++|.+++..+..+. .+++|++|+|++| .++.. ++. +..+++|++|+|++|.+++..+..+ .
T Consensus 102 ~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~ 181 (594)
T 2p1m_B 102 SSYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPD 181 (594)
T ss_dssp HHCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCT
T ss_pred HhCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhh
Confidence 4567788888888877765555554 5778888888777 44321 333 2367778888888887765433333 3
Q ss_pred ccccccceecccccccccCCC-----C--CCCCCcEEEcccCCCccccccccccCCCCc
Q 006922 160 NLTQLEALYLANNSLSGKIPD-----L--NLPNLQQLNLANNNLSGSIPQSLKRFPSSA 211 (625)
Q Consensus 160 ~l~~L~~L~l~~N~l~~~~p~-----~--~l~~L~~L~l~~N~l~g~~p~~l~~~~~~~ 211 (625)
.+++|+.|+|++|. +.+.. . .+++|+.|+|++|...+.+|..+.+++.+.
T Consensus 182 ~~~~L~~L~l~~~~--~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~ 238 (594)
T 2p1m_B 182 TYTSLVSLNISCLA--SEVSFSALERLVTRCPNLKSLKLNRAVPLEKLATLLQRAPQLE 238 (594)
T ss_dssp TCCCCCEEECTTCC--SCCCHHHHHHHHHHCTTCCEEECCTTSCHHHHHHHHHHCTTCS
T ss_pred cCCcCcEEEecccC--CcCCHHHHHHHHHhCCCCcEEecCCCCcHHHHHHHHhcCCcce
Confidence 55678888888776 12221 1 357788888887733223666555555543
No 414
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=97.95 E-value=9.2e-07 Score=91.52 Aligned_cols=110 Identities=14% Similarity=0.162 Sum_probs=61.0
Q ss_pred cccCCCCccEEEecCCCCCccCCcccccccccccccccccccCCCC-CCc--ccccccceecCCC--ccCCCC-----CC
Q 006922 86 TISRLSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSGTL-PDF--SVWKNLTIINLSD--NGFNGT-----IP 155 (625)
Q Consensus 86 ~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~-p~~--~~l~~L~~L~ls~--N~l~~~-----~p 155 (625)
.+..+++|+.|+|++|.-.. ++. + .+++|+.|+|..|.++... ..+ ..+++|+.|+|+. |...+. +.
T Consensus 167 ll~~~P~L~~L~L~g~~~l~-l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~ 243 (362)
T 2ra8_A 167 VLDAMPLLNNLKIKGTNNLS-IGK-K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFR 243 (362)
T ss_dssp HHHTCTTCCEEEEECCBTCB-CCS-C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTG
T ss_pred HHhcCCCCcEEEEeCCCCce-ecc-c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHH
Confidence 35667778888887763111 232 3 2677777777766654211 122 2567777777642 221111 01
Q ss_pred CCc--cccccccceecccccccccCCC-----CCCCCCcEEEcccCCCcc
Q 006922 156 RSL--SNLTQLEALYLANNSLSGKIPD-----LNLPNLQQLNLANNNLSG 198 (625)
Q Consensus 156 ~~l--~~l~~L~~L~l~~N~l~~~~p~-----~~l~~L~~L~l~~N~l~g 198 (625)
..+ ..+++|+.|+|++|.+.+..+. ..+++|+.|+|+.|.|++
T Consensus 244 ~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d 293 (362)
T 2ra8_A 244 PLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTD 293 (362)
T ss_dssp GGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBH
T ss_pred HHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCCh
Confidence 112 2456777777777776542211 146677777777777765
No 415
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=97.81 E-value=9.4e-07 Score=82.40 Aligned_cols=110 Identities=14% Similarity=0.093 Sum_probs=82.1
Q ss_pred CeEEEEEcCCC-Cccccc---CcccccCCCCccEEEecCCCCCcc----CCcccccccccccccccccccCCC----C-C
Q 006922 66 KRVVAVRLPGV-GFSGLI---PPNTISRLSALKILSLRSNVITGY----FPSDFINLKSLCYLYLQFNNFSGT----L-P 132 (625)
Q Consensus 66 ~~v~~l~l~~~-~l~g~~---~~~~~~~l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~----~-p 132 (625)
..++.|+|++| ++...- -...+...++|++|+|++|.|... +...+...++|++|+|++|.+... + .
T Consensus 36 ~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~~ 115 (185)
T 1io0_A 36 PDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVE 115 (185)
T ss_dssp TTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHH
T ss_pred CCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHHH
Confidence 45888999998 775321 122467789999999999999742 233345567899999999999752 1 2
Q ss_pred CcccccccceecC--CCccCCCC----CCCCccccccccceeccccccc
Q 006922 133 DFSVWKNLTIINL--SDNGFNGT----IPRSLSNLTQLEALYLANNSLS 175 (625)
Q Consensus 133 ~~~~l~~L~~L~l--s~N~l~~~----~p~~l~~l~~L~~L~l~~N~l~ 175 (625)
.+...++|++|+| ++|.|... +...+...++|++|+|++|.+.
T Consensus 116 ~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 116 ALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp GGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 4667789999999 88999753 2334556689999999999985
No 416
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=97.75 E-value=5.3e-05 Score=79.57 Aligned_cols=124 Identities=19% Similarity=0.227 Sum_probs=84.4
Q ss_pred eEEEEEcCCCCcccccCcccccCCCCccEEEecCCCCCccCCcccccccccccccccccccCCCCC-CcccccccceecC
Q 006922 67 RVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSGTLP-DFSVWKNLTIINL 145 (625)
Q Consensus 67 ~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l 145 (625)
.+..+.|+.+ +. .|+...|.++++|+.++|..| ++..-...|.+ .+|+.++|. |.++..-+ .|..+++|+.+++
T Consensus 204 ~L~~l~lp~~-l~-~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~lp-~~i~~I~~~aF~~c~~L~~l~l 278 (401)
T 4fdw_A 204 GIEEVLLPVT-LK-EIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKLP-NGVTNIASRAFYYCPELAEVTT 278 (401)
T ss_dssp CCSEEECCTT-CC-EECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEEE-TTCCEECTTTTTTCTTCCEEEE
T ss_pred ccCEEEeCCc-hh-eehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEeC-CCccEEChhHhhCCCCCCEEEe
Confidence 4667777744 43 567778889999999999875 56555566766 778888884 44542222 5778888888888
Q ss_pred CCccCC-----CCCCCCccccccccceecccccccccCCCC--CCCCCcEEEcccCCCc
Q 006922 146 SDNGFN-----GTIPRSLSNLTQLEALYLANNSLSGKIPDL--NLPNLQQLNLANNNLS 197 (625)
Q Consensus 146 s~N~l~-----~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~L~l~~N~l~ 197 (625)
.+|.+. ..-+..|..|++|+.++|.+ .++..-... .+++|+.++|..| ++
T Consensus 279 ~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~~-~i~~I~~~aF~~c~~L~~l~lp~~-l~ 335 (401)
T 4fdw_A 279 YGSTFNDDPEAMIHPYCLEGCPKLARFEIPE-SIRILGQGLLGGNRKVTQLTIPAN-VT 335 (401)
T ss_dssp ESSCCCCCTTCEECTTTTTTCTTCCEECCCT-TCCEECTTTTTTCCSCCEEEECTT-CC
T ss_pred CCccccCCcccEECHHHhhCCccCCeEEeCC-ceEEEhhhhhcCCCCccEEEECcc-cc
Confidence 887764 23355778888888888884 455332322 6778888888554 54
No 417
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.74 E-value=8.5e-05 Score=77.88 Aligned_cols=73 Identities=8% Similarity=0.093 Sum_probs=48.0
Q ss_pred hHcccCCceeEEEEEEc-CCcEEEEEEecccc--------CChHHHHHHHHHHHcCCC--Ccee-cceeEEEecCceEEE
Q 006922 330 EVLGKGTFGMAYKAILE-DGTTVVVKRLKDVN--------VGKRDFEQQMEIVGSIRH--ENVV-ELKAYYYSKDEKLMV 397 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~--------~~~~~~~~e~~~l~~l~h--~niv-~l~~~~~~~~~~~lv 397 (625)
+.||.|.++.||++... +++.++||...... .....+..|.+++..+.. +..+ +++.+ +.+..++|
T Consensus 36 ~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~lv 113 (397)
T 2olc_A 36 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVTV 113 (397)
T ss_dssp EECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEEE
T ss_pred EECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEEE
Confidence 35899999999999754 47889999865321 123456778888877632 3333 44433 44567899
Q ss_pred EEeccCC
Q 006922 398 YDYYSLG 404 (625)
Q Consensus 398 ~e~~~~g 404 (625)
|||+++.
T Consensus 114 mE~l~g~ 120 (397)
T 2olc_A 114 MEDLSHL 120 (397)
T ss_dssp ECCCTTS
T ss_pred EEeCCCc
Confidence 9999764
No 418
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=97.67 E-value=1.2e-05 Score=83.13 Aligned_cols=138 Identities=13% Similarity=0.145 Sum_probs=90.0
Q ss_pred CeEEEEEcCCCCccc-ccC------cccccCCCCccEEEecCCCCC---------ccCCcccccccccccccccccccCC
Q 006922 66 KRVVAVRLPGVGFSG-LIP------PNTISRLSALKILSLRSNVIT---------GYFPSDFINLKSLCYLYLQFNNFSG 129 (625)
Q Consensus 66 ~~v~~l~l~~~~l~g-~~~------~~~~~~l~~L~~L~l~~N~l~---------~~~p~~~~~l~~L~~L~L~~N~l~~ 129 (625)
.+|+.|.+...++.| ... .+++..+++|+.|.+..+.+. +.+...+..+++|+.|+|++|.-.
T Consensus 107 ~~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l- 185 (362)
T 2ra8_A 107 PSLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL- 185 (362)
T ss_dssp GGCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-
T ss_pred hhcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-
Confidence 357777777666553 210 123567899999999876542 113334567789999999988311
Q ss_pred CCCCcccccccceecCCCccCCCCCCCCcc--ccccccceeccc--cccccc---------CCCCCCCCCcEEEcccCCC
Q 006922 130 TLPDFSVWKNLTIINLSDNGFNGTIPRSLS--NLTQLEALYLAN--NSLSGK---------IPDLNLPNLQQLNLANNNL 196 (625)
Q Consensus 130 ~~p~~~~l~~L~~L~ls~N~l~~~~p~~l~--~l~~L~~L~l~~--N~l~~~---------~p~~~l~~L~~L~l~~N~l 196 (625)
.++.+ .+++|+.|+|..|.++...-..+. .+++|+.|+|+. |...+. +....+++|+.|+|++|.+
T Consensus 186 ~l~~~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i 264 (362)
T 2ra8_A 186 SIGKK-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEE 264 (362)
T ss_dssp BCCSC-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTT
T ss_pred eeccc-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCC
Confidence 33444 388999999999988643323333 688999999863 332221 1112578999999999999
Q ss_pred ccccccccc
Q 006922 197 SGSIPQSLK 205 (625)
Q Consensus 197 ~g~~p~~l~ 205 (625)
+...+..+.
T Consensus 265 ~~~~~~~la 273 (362)
T 2ra8_A 265 QNVVVEMFL 273 (362)
T ss_dssp HHHHHHHHH
T ss_pred chHHHHHHH
Confidence 865554443
No 419
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=97.66 E-value=0.00012 Score=76.88 Aligned_cols=64 Identities=17% Similarity=0.172 Sum_probs=28.8
Q ss_pred cCcccccCCCCccEEEecCCCCCccCCcccccccccccccccccccCCCCC-CcccccccceecCCC
Q 006922 82 IPPNTISRLSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSGTLP-DFSVWKNLTIINLSD 147 (625)
Q Consensus 82 ~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~ls~ 147 (625)
|++..|.++.+|+.++|++|.++......|. ..+|+.+.|..| ++..-. .|..+++|+.+++.+
T Consensus 171 I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~ 235 (401)
T 4fdw_A 171 LKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPE 235 (401)
T ss_dssp ECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCT
T ss_pred ehHHHhhCcccCCeeecCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCC
Confidence 3344455555555555555555543333333 345555555422 221111 344455555555544
No 420
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.61 E-value=0.00027 Score=71.29 Aligned_cols=138 Identities=15% Similarity=0.141 Sum_probs=90.8
Q ss_pred HcccCCceeEEEEEEcCCcEEEEEEeccccCChHHHHHHHHHHHcCC---CCceecceeEEEecCceEEEEEeccCCChh
Q 006922 331 VLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIR---HENVVELKAYYYSKDEKLMVYDYYSLGSVS 407 (625)
Q Consensus 331 ~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~~~~~~lv~e~~~~g~L~ 407 (625)
.|+.|....+|+... ++..+++|+-... ....+..|++.|..+. ...+.++++++...+..++||||+++..+.
T Consensus 43 ~l~gG~~n~~y~v~~-~~~~~vlK~~~~~--~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~~~~ 119 (312)
T 3jr1_A 43 KLYSGEMNEIWLIND-EVQTVFVKINERS--YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKSKNK 119 (312)
T ss_dssp EECCSSSSEEEEEES-SSCEEEEEEEEGG--GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCCCCC
T ss_pred EeCCccceeeeEEEE-CCCeEEEEeCCcc--cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCCCCC
Confidence 478899999999886 4678888987643 2456888988888773 356788888888888899999999987653
Q ss_pred h-----------hhccccC-CC----------------CccCCHHHHH---HHHH----------------HHHH-HHHH
Q 006922 408 A-----------MLHSERG-EG----------------RIPLDWDTRM---RIAI----------------GAAR-GIAR 439 (625)
Q Consensus 408 ~-----------~l~~~~~-~~----------------~~~l~~~~~~---~i~~----------------~ia~-~l~~ 439 (625)
. .+|.... .. .-.-+|.... ++.. .+.. ....
T Consensus 120 ~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~l~~~ 199 (312)
T 3jr1_A 120 QSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIVADT 199 (312)
T ss_dssp TTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHH
Confidence 1 2333221 00 0012565432 1111 1111 1123
Q ss_pred HHh-cCCCCceecCCCCCCEEeCCCCCeeEeccc
Q 006922 440 IHA-ANGGKLVHGNIKSSNIFLNSQQYGCVSDLG 472 (625)
Q Consensus 440 LH~-~~~~~ivHrDlk~~NIll~~~~~~kl~DfG 472 (625)
|.. ...+.++|+|+.+.|++++.++ +.|.|+.
T Consensus 200 L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 200 LSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred hccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 321 2245699999999999999887 8899974
No 421
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.30 E-value=0.0017 Score=65.72 Aligned_cols=143 Identities=15% Similarity=0.106 Sum_probs=82.7
Q ss_pred cccCCceeEEEEEEcCCcEEEEEEeccccCChHHHHHHHHHHHcCCCC--ceecceeE-----EEecCceEEEEEeccCC
Q 006922 332 LGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHE--NVVELKAY-----YYSKDEKLMVYDYYSLG 404 (625)
Q Consensus 332 lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~--niv~l~~~-----~~~~~~~~lv~e~~~~g 404 (625)
++ |....||+....+|+.+++|+..........+..|..++..+... .+.+++.. ....+..++||+|++|.
T Consensus 34 l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i~G~ 112 (328)
T 1zyl_A 34 LN-SYENRVYQFQDEDRRRFVVKFYRPERWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGGR 112 (328)
T ss_dssp EC-CSSSEEEEECCTTCCCEEEEEECTTTSCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCCE
T ss_pred ec-CcccceEEEEcCCCCEEEEEEcCCCCCCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEecCCC
Confidence 55 777789988877787899999875444556777788877766421 23334432 12245567899999885
Q ss_pred Chhh--------------hhccccCC----CCccCCHHHH----HHH---------------HHHHHHHHHHHHhc----
Q 006922 405 SVSA--------------MLHSERGE----GRIPLDWDTR----MRI---------------AIGAARGIARIHAA---- 443 (625)
Q Consensus 405 ~L~~--------------~l~~~~~~----~~~~l~~~~~----~~i---------------~~~ia~~l~~LH~~---- 443 (625)
.+.. .+|..... .....++... ..+ ...+.+.++.+...
T Consensus 113 ~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 192 (328)
T 1zyl_A 113 QFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWRED 192 (328)
T ss_dssp ECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHCCSC
T ss_pred CCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 5421 11211110 1112233211 000 11111223333321
Q ss_pred CCCCceecCCCCCCEEeCCCCCeeEecccccccc
Q 006922 444 NGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTIT 477 (625)
Q Consensus 444 ~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~ 477 (625)
....++|+|+++.||+++ + .+.|+||+.+...
T Consensus 193 ~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~g 224 (328)
T 1zyl_A 193 FTVLRLHGDCHAGNILWR-D-GPMFVDLDDARNG 224 (328)
T ss_dssp SCCEECCSSCSGGGEEES-S-SEEECCCTTCCEE
T ss_pred CCeeeeeCCCCcccEeEc-C-CCEEEECCCCCcC
Confidence 233489999999999998 4 8899999877643
No 422
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.29 E-value=0.0009 Score=70.62 Aligned_cols=76 Identities=8% Similarity=0.112 Sum_probs=48.6
Q ss_pred CCCceecCCCCCCEEeCCCCCeeEeccccccccccccc---ccc-cCCCcCCccccCCC---CCCCccchhhhHHHHHHH
Q 006922 445 GGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAP---VIA-RAAGYRAPEVTDSR---KATQASDVYSFGVVLLEI 517 (625)
Q Consensus 445 ~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~---~~~-~~~~y~aPE~~~~~---~~~~~~DvwS~Gvil~el 517 (625)
.+.++|+|+++.|||++.++ ++++||+.+........ ... -...|.+|+..... ......++.+....+|+.
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWNL 309 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHHH
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHHH
Confidence 34599999999999998876 99999998876542211 000 01235666654321 112345566888888887
Q ss_pred HhCC
Q 006922 518 LTGK 521 (625)
Q Consensus 518 ltG~ 521 (625)
++++
T Consensus 310 y~~~ 313 (420)
T 2pyw_A 310 FNKR 313 (420)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7754
No 423
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.27 E-value=0.0015 Score=65.05 Aligned_cols=73 Identities=18% Similarity=0.205 Sum_probs=52.3
Q ss_pred hHcccCCceeEEEEEEcCCcEEEEEEeccccC-ChHHHHHHHHHHHcCCCC---ceecceeEEEecCceEEEEEeccCCC
Q 006922 330 EVLGKGTFGMAYKAILEDGTTVVVKRLKDVNV-GKRDFEQQMEIVGSIRHE---NVVELKAYYYSKDEKLMVYDYYSLGS 405 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~-~~~~~~~e~~~l~~l~h~---niv~l~~~~~~~~~~~lv~e~~~~g~ 405 (625)
+.+|.|..+.||+....||+.|.+|+-..... ....|..|++.|..+.-. .+.+++++ +..++||||++++.
T Consensus 21 ~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~----~~~~lv~e~l~~~~ 96 (288)
T 3f7w_A 21 AERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW----DDRTLAMEWVDERP 96 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE----ETTEEEEECCCCCC
T ss_pred EecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEec----cCceEEEEeecccC
Confidence 34789999999999999999999998764432 234688899988877421 23344443 23578999998765
Q ss_pred h
Q 006922 406 V 406 (625)
Q Consensus 406 L 406 (625)
.
T Consensus 97 ~ 97 (288)
T 3f7w_A 97 P 97 (288)
T ss_dssp C
T ss_pred C
Confidence 4
No 424
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.15 E-value=0.0012 Score=66.19 Aligned_cols=70 Identities=10% Similarity=0.041 Sum_probs=42.9
Q ss_pred hHcccCCceeEEEEEEcCCcEEEEEEeccccCChHHHHHHHHHHHcCCCCce-ecceeEEEecCceEEEEEec-cCCCh
Q 006922 330 EVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENV-VELKAYYYSKDEKLMVYDYY-SLGSV 406 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e~~-~~g~L 406 (625)
+.|+.|....+|+. ..+++|+.........+..+|+.++..+....+ .+++++ +.+.-++|+||+ ++.++
T Consensus 24 ~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i~~g~~l 95 (301)
T 3dxq_A 24 LERLGGLTNLVFRA-----GDLCLRIPGKGTEEYINRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYIAGAQTM 95 (301)
T ss_dssp EEEESCSSEEEEEE-----TTEEEEEECC----CCCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECCTTCEEC
T ss_pred eEcCCcccccccee-----eeEEEECCCCCccceeCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeecCCCccC
Confidence 34788999999998 558888876532222344667777776643233 344443 344467899999 55444
No 425
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=97.04 E-value=0.0016 Score=67.38 Aligned_cols=143 Identities=11% Similarity=0.131 Sum_probs=82.4
Q ss_pred HcccCCceeEEEEEEc--------CCcEEEEEEeccccCChHHHHHHHHHHHcCCCCc-eecceeEEEecCceEEEEEec
Q 006922 331 VLGKGTFGMAYKAILE--------DGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHEN-VVELKAYYYSKDEKLMVYDYY 401 (625)
Q Consensus 331 ~lg~G~~g~Vy~~~~~--------~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~n-iv~l~~~~~~~~~~~lv~e~~ 401 (625)
.|..|-...+|+.... +++.+++|+.........++.+|.++++.+.-.. ..++++++.+ .+||||+
T Consensus 57 ~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e~i 132 (379)
T 3feg_A 57 PVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAILQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQYI 132 (379)
T ss_dssp EC-----CCEEEEECCTTSCCCSSCCSEEEEEECC---CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEECC
T ss_pred EcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCccchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEEEe
Confidence 3666778888998864 2578999986443334566778999888774222 3456655533 3999999
Q ss_pred cCCChhhh-----------------hccccCCCCccCC--HHHHHHHHHHHHH-------------------HHHHH---
Q 006922 402 SLGSVSAM-----------------LHSERGEGRIPLD--WDTRMRIAIGAAR-------------------GIARI--- 440 (625)
Q Consensus 402 ~~g~L~~~-----------------l~~~~~~~~~~l~--~~~~~~i~~~ia~-------------------~l~~L--- 440 (625)
+|..+... +|........+.. |.+..++..++.. .+.+|
T Consensus 133 ~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~ 212 (379)
T 3feg_A 133 PSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLRKL 212 (379)
T ss_dssp SEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHHHH
T ss_pred cCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHHHH
Confidence 98665421 1211111111122 4555555443321 22333
Q ss_pred -HhcC-CCCceecCCCCCCEEeCCC----CCeeEecccccccc
Q 006922 441 -HAAN-GGKLVHGNIKSSNIFLNSQ----QYGCVSDLGLTTIT 477 (625)
Q Consensus 441 -H~~~-~~~ivHrDlk~~NIll~~~----~~~kl~DfGla~~~ 477 (625)
.... ...++|+|+.+.||+++.+ +.+.++||..+...
T Consensus 213 L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~~ 255 (379)
T 3feg_A 213 LESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSYN 255 (379)
T ss_dssp HHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEEE
T ss_pred HhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCcC
Confidence 2222 2358999999999999876 68999999987643
No 426
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=96.92 E-value=0.0041 Score=62.69 Aligned_cols=144 Identities=8% Similarity=0.064 Sum_probs=80.2
Q ss_pred HcccCCceeEEEEEEcCCcEEEEEEeccccCChHHHHHHHHHHHcCCCCc--eecceeE------EEecCceEEEEEecc
Q 006922 331 VLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHEN--VVELKAY------YYSKDEKLMVYDYYS 402 (625)
Q Consensus 331 ~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~n--iv~l~~~------~~~~~~~~lv~e~~~ 402 (625)
.|+.|....+|+....+| .+++|+.... .....+..|++++..+.... +.+++.. ....+..+++|+|++
T Consensus 29 ~i~~G~~n~~~~v~~~~g-~~vlk~~~~~-~~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l~~~l~ 106 (322)
T 2ppq_A 29 GIAEGVENSNFLLHTTKD-PLILTLYEKR-VEKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALISFLE 106 (322)
T ss_dssp EECC---EEEEEEEESSC-CEEEEEECC----CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEEECCC
T ss_pred ccCCCcccceEEEEeCCc-cEEEEEeCCC-CCHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEEEEeCC
Confidence 367788889999987665 6788988752 22345667777776653211 2223211 122356789999999
Q ss_pred CCChhh--------------hhccccCC---C----CccCCHHHHHH------------HHHHHHHHHHHHHhcC----C
Q 006922 403 LGSVSA--------------MLHSERGE---G----RIPLDWDTRMR------------IAIGAARGIARIHAAN----G 445 (625)
Q Consensus 403 ~g~L~~--------------~l~~~~~~---~----~~~l~~~~~~~------------i~~~ia~~l~~LH~~~----~ 445 (625)
|..+.. .+|..... . .....|..... +...+.+.+++++... .
T Consensus 107 G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~~~~~~~~ 186 (322)
T 2ppq_A 107 GMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHWPKDLP 186 (322)
T ss_dssp CBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHCCCSSC
T ss_pred CcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCcccCC
Confidence 865421 12221110 0 00112433111 1112445556665421 2
Q ss_pred CCceecCCCCCCEEeCCCCCeeEeccccccc
Q 006922 446 GKLVHGNIKSSNIFLNSQQYGCVSDLGLTTI 476 (625)
Q Consensus 446 ~~ivHrDlk~~NIll~~~~~~kl~DfGla~~ 476 (625)
..++|+|+.+.|||++.+..+.|+||+.+..
T Consensus 187 ~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~ 217 (322)
T 2ppq_A 187 AGVIHADLFQDNVFFLGDELSGLIDFYFACN 217 (322)
T ss_dssp EEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred cccCCCCCCccCEEEeCCceEEEecchhccC
Confidence 3589999999999998876567999997654
No 427
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.92 E-value=0.0021 Score=67.93 Aligned_cols=71 Identities=10% Similarity=0.134 Sum_probs=47.9
Q ss_pred HcccCCceeEEEEEEcC--------CcEEEEEEeccccCChHHHHHHHHHHHcCCCCce-ecceeEEEecCceEEEEEec
Q 006922 331 VLGKGTFGMAYKAILED--------GTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENV-VELKAYYYSKDEKLMVYDYY 401 (625)
Q Consensus 331 ~lg~G~~g~Vy~~~~~~--------g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e~~ 401 (625)
.|+.|....+|+....+ +..+++|+.... .....+.+|..++..+...++ .++++.+.+ .+|+||+
T Consensus 80 ~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~-~~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~e~l 154 (429)
T 1nw1_A 80 RIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP-ETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLEEYI 154 (429)
T ss_dssp EECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC-CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEECCC
T ss_pred EeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC-CcHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEEEEe
Confidence 47788889999998753 578999988432 111556678888887753333 456655432 3899999
Q ss_pred cCCCh
Q 006922 402 SLGSV 406 (625)
Q Consensus 402 ~~g~L 406 (625)
++.++
T Consensus 155 ~G~~l 159 (429)
T 1nw1_A 155 PSRPL 159 (429)
T ss_dssp CEEEC
T ss_pred CCccc
Confidence 87444
No 428
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=96.85 E-value=9.2e-05 Score=67.58 Aligned_cols=34 Identities=9% Similarity=-0.012 Sum_probs=17.6
Q ss_pred CccEEEecCCCCCccCCccccccccccccccccc
Q 006922 92 ALKILSLRSNVITGYFPSDFINLKSLCYLYLQFN 125 (625)
Q Consensus 92 ~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N 125 (625)
.|+.|||+++.++..--..+.++++|+.|+|+++
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C 95 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKC 95 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCC
Confidence 4566666666554322223445555555555555
No 429
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.85 E-value=0.0056 Score=65.05 Aligned_cols=72 Identities=7% Similarity=0.101 Sum_probs=46.9
Q ss_pred HcccCCceeEEEEEEcC-CcEEEEEEeccccCChHHHHHHHHHHHcCCCCce-ecceeEEEecCceEEEEEeccCCCh
Q 006922 331 VLGKGTFGMAYKAILED-GTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENV-VELKAYYYSKDEKLMVYDYYSLGSV 406 (625)
Q Consensus 331 ~lg~G~~g~Vy~~~~~~-g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e~~~~g~L 406 (625)
.|+.|-...+|+....+ +..+++|+.........+..+|..++..+...++ .++++++. + .+||||+++.++
T Consensus 115 ~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~~l 188 (458)
T 2qg7_A 115 IINGGITNILIKVKDMSKQAKYLIRLYGPKTDEIINREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGYAL 188 (458)
T ss_dssp EECC--CEEEEEEEETTTTEEEEEEEECC-CCSCSCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSEEC
T ss_pred EcCCCeEeEEEEEEECCCCceEEEEECCCChhhhcCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCccC
Confidence 47788889999998765 5788888875432222234688888888864444 45666652 2 359999987554
No 430
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.80 E-value=0.0024 Score=65.98 Aligned_cols=72 Identities=8% Similarity=0.072 Sum_probs=42.7
Q ss_pred HcccCCceeEEEEEEcC---------CcEEEEEEeccccCChHHHHHHHHHHHcCCCCce-ecceeEEEecCceEEEEEe
Q 006922 331 VLGKGTFGMAYKAILED---------GTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENV-VELKAYYYSKDEKLMVYDY 400 (625)
Q Consensus 331 ~lg~G~~g~Vy~~~~~~---------g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e~ 400 (625)
.++.|..-.+|+....+ +..+++|+.........+...|.+++..+...++ .++++.. .-++||||
T Consensus 40 ~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~~~~~~~E~~~l~~L~~~g~~P~~~~~~----~~~~v~e~ 115 (369)
T 3c5i_A 40 QILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDELYNTISEFEVYKTMSKYKIAPQLLNTF----NGGRIEEW 115 (369)
T ss_dssp EC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGGTSCHHHHHHHHHHHHHTTSSCCEEEEE----TTEEEEEC
T ss_pred EeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccceecHHHHHHHHHHHHhcCCCCceEEec----CCcEEEEE
Confidence 36778888999988654 2678888775432211234678887777743333 3555443 23689999
Q ss_pred ccCCCh
Q 006922 401 YSLGSV 406 (625)
Q Consensus 401 ~~~g~L 406 (625)
+++..+
T Consensus 116 i~G~~l 121 (369)
T 3c5i_A 116 LYGDPL 121 (369)
T ss_dssp CCSEEC
T ss_pred ecCCcC
Confidence 987544
No 431
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.79 E-value=0.0063 Score=61.76 Aligned_cols=143 Identities=13% Similarity=0.091 Sum_probs=71.6
Q ss_pred cccCCcee-EEEEEEcCCcEEEEEEeccccCChHHHHHHHHHHHcCCC--CceecceeEEEecCceEEEEEeccCCChhh
Q 006922 332 LGKGTFGM-AYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRH--ENVVELKAYYYSKDEKLMVYDYYSLGSVSA 408 (625)
Q Consensus 332 lg~G~~g~-Vy~~~~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h--~niv~l~~~~~~~~~~~lv~e~~~~g~L~~ 408 (625)
|+.|+... +|+....+|..+++|.-.... ..++..|++++..+.. -.+.+++.+... .-++|||++.+..+.+
T Consensus 26 l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~--~~~~~~e~~~l~~L~~~g~~vP~v~~~d~~--~g~ll~e~l~~~~l~~ 101 (333)
T 3csv_A 26 LAGDASSRRYQRLRSPTGAKAVLMDWSPEE--GGDTQPFVDLAQYLRNLDISAPEIYAEEHA--RGLLLIEDLGDALFTE 101 (333)
T ss_dssp --------CCEEEECTTCCEEEEEECCTTT--TCCSHHHHHHHHHHHHTTCBCCCEEEEETT--TTEEEECCCCSCBHHH
T ss_pred CCCCCCCceEEEEEcCCCCeEEEEECCCCC--CccccHHHHHHHHHHhCCCCCCceeeecCC--CCEEEEeeCCCcchHH
Confidence 44454443 667765446777777544321 1345566776666532 234455655332 2378999987766544
Q ss_pred hhccc---------------------cCCCCccCCHHHHH-------H-------------HHHHHHHHHHHHHh---cC
Q 006922 409 MLHSE---------------------RGEGRIPLDWDTRM-------R-------------IAIGAARGIARIHA---AN 444 (625)
Q Consensus 409 ~l~~~---------------------~~~~~~~l~~~~~~-------~-------------i~~~ia~~l~~LH~---~~ 444 (625)
.+... .......++..... . ....+.+.++.+.. ..
T Consensus 102 ~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~~~~ 181 (333)
T 3csv_A 102 VINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQLEG 181 (333)
T ss_dssp HHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHHCCS
T ss_pred HhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhcccC
Confidence 33211 00000111111100 0 00111222233311 12
Q ss_pred CCCceecCCCCCCEEeCCC----CCeeEeccccccccc
Q 006922 445 GGKLVHGNIKSSNIFLNSQ----QYGCVSDLGLTTITS 478 (625)
Q Consensus 445 ~~~ivHrDlk~~NIll~~~----~~~kl~DfGla~~~~ 478 (625)
.+.++|+|+.+.||+++.+ +.+.|+||+.+....
T Consensus 182 ~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G~ 219 (333)
T 3csv_A 182 DMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLGH 219 (333)
T ss_dssp CCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEEC
T ss_pred CCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcCC
Confidence 3459999999999999875 678999999887543
No 432
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=96.38 E-value=0.00036 Score=63.60 Aligned_cols=84 Identities=12% Similarity=0.072 Sum_probs=60.3
Q ss_pred ccccccccccccccCC-CCCCcccccccceecCCCcc-CCCCCCCCcccc----ccccceeccccc-ccc--cCCCCCCC
Q 006922 114 LKSLCYLYLQFNNFSG-TLPDFSVWKNLTIINLSDNG-FNGTIPRSLSNL----TQLEALYLANNS-LSG--KIPDLNLP 184 (625)
Q Consensus 114 l~~L~~L~L~~N~l~~-~~p~~~~l~~L~~L~ls~N~-l~~~~p~~l~~l----~~L~~L~l~~N~-l~~--~~p~~~l~ 184 (625)
-.+|+.|||+++.++. .+..+..+++|+.|+|++|. |+..--..+..+ ++|++|+|+++. ++. ...-..++
T Consensus 60 ~~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~ 139 (176)
T 3e4g_A 60 KYKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFR 139 (176)
T ss_dssp CCCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCT
T ss_pred CceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCC
Confidence 3579999999999864 24467889999999999995 764322234432 479999999974 763 11112689
Q ss_pred CCcEEEcccCC-Cc
Q 006922 185 NLQQLNLANNN-LS 197 (625)
Q Consensus 185 ~L~~L~l~~N~-l~ 197 (625)
+|+.|+|+++. ++
T Consensus 140 ~L~~L~L~~c~~It 153 (176)
T 3e4g_A 140 NLKYLFLSDLPGVK 153 (176)
T ss_dssp TCCEEEEESCTTCC
T ss_pred CCCEEECCCCCCCC
Confidence 99999999985 44
No 433
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.24 E-value=0.0052 Score=53.12 Aligned_cols=34 Identities=32% Similarity=0.472 Sum_probs=15.5
Q ss_pred cccceecccccccccCCCC--CCCCCcEEEcccCCC
Q 006922 163 QLEALYLANNSLSGKIPDL--NLPNLQQLNLANNNL 196 (625)
Q Consensus 163 ~L~~L~l~~N~l~~~~p~~--~l~~L~~L~l~~N~l 196 (625)
+|+.|+|++|+|+...+.. .+++|+.|+|++|.+
T Consensus 32 ~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 32 DTTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp TCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred CCCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 3444455555444332221 344555555555544
No 434
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.22 E-value=0.03 Score=56.89 Aligned_cols=33 Identities=15% Similarity=0.278 Sum_probs=28.3
Q ss_pred CCceecCCCCCCEEeCCCCCeeEeccccccccc
Q 006922 446 GKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITS 478 (625)
Q Consensus 446 ~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~ 478 (625)
..++|+|+.+.||+++.++.+.|+||+.+....
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~~~ 238 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPMLAP 238 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEEEC
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCeeCC
Confidence 358999999999999988889999998776543
No 435
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.16 E-value=0.005 Score=53.23 Aligned_cols=54 Identities=20% Similarity=0.252 Sum_probs=29.4
Q ss_pred EEEecCCCCC-ccCCcccccccccccccccccccCCCCC-CcccccccceecCCCccC
Q 006922 95 ILSLRSNVIT-GYFPSDFINLKSLCYLYLQFNNFSGTLP-DFSVWKNLTIINLSDNGF 150 (625)
Q Consensus 95 ~L~l~~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~ls~N~l 150 (625)
.++.+++.++ ..+|..+. .+|++|+|++|+|+...+ .|..+++|+.|+|++|.+
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 6677777776 23554332 346666666666653333 345555555555555554
No 436
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=95.94 E-value=0.014 Score=60.34 Aligned_cols=102 Identities=17% Similarity=0.163 Sum_probs=42.6
Q ss_pred ccCCCCccEEEecCCCCCccCCcccccccccccccccccccCCCCC-CcccccccceecCCCccCCCCCCCCcccccccc
Q 006922 87 ISRLSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSGTLP-DFSVWKNLTIINLSDNGFNGTIPRSLSNLTQLE 165 (625)
Q Consensus 87 ~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~ls~N~l~~~~p~~l~~l~~L~ 165 (625)
+....+|+.+.+..+ +.......|.++..|+.+.+..+ ++..-. .|..+.+|+.+.+.++ ++..-...|..+++|+
T Consensus 213 f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~ 289 (379)
T 4h09_A 213 FSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLT 289 (379)
T ss_dssp TTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCC
T ss_pred cccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccc
Confidence 444555555555433 22223334445555555555443 221111 2444444555544332 2212223444455555
Q ss_pred ceecccccccccCCCC--CCCCCcEEEc
Q 006922 166 ALYLANNSLSGKIPDL--NLPNLQQLNL 191 (625)
Q Consensus 166 ~L~l~~N~l~~~~p~~--~l~~L~~L~l 191 (625)
.+.+.+|.++..-... ++.+|+.+.|
T Consensus 290 ~i~l~~~~i~~I~~~aF~~c~~L~~i~l 317 (379)
T 4h09_A 290 KVVMDNSAIETLEPRVFMDCVKLSSVTL 317 (379)
T ss_dssp EEEECCTTCCEECTTTTTTCTTCCEEEC
T ss_pred cccccccccceehhhhhcCCCCCCEEEc
Confidence 5555544444222211 3444555544
No 437
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=95.74 E-value=0.0098 Score=61.91 Aligned_cols=109 Identities=17% Similarity=0.328 Sum_probs=77.6
Q ss_pred cCcccccCCCCccEEEecCCCCCccCCcccccccccccccccccccCCCCC--CcccccccceecCCCccCCCCCCCCcc
Q 006922 82 IPPNTISRLSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSGTLP--DFSVWKNLTIINLSDNGFNGTIPRSLS 159 (625)
Q Consensus 82 ~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p--~~~~l~~L~~L~ls~N~l~~~~p~~l~ 159 (625)
+....|.++..|+.+.+..+..+ .-...|.++.+|+.+.+. +.++ .++ .|..+.+|+.++|.+| ++..-..+|.
T Consensus 256 i~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~-~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~ 331 (394)
T 4gt6_A 256 IETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRIT-ELPESVFAGCISLKSIDIPEG-ITQILDDAFA 331 (394)
T ss_dssp ECTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCC-EECTTTTTTCTTCCEEECCTT-CCEECTTTTT
T ss_pred cccceeeecccccEEecccccce-ecCcccccccccccccCC-Cccc-ccCceeecCCCCcCEEEeCCc-ccEehHhHhh
Confidence 34456888889999988765543 445678888889988886 3444 333 5888889999998765 5534456788
Q ss_pred ccccccceecccccccccCCC---CCCCCCcEEEcccCCC
Q 006922 160 NLTQLEALYLANNSLSGKIPD---LNLPNLQQLNLANNNL 196 (625)
Q Consensus 160 ~l~~L~~L~l~~N~l~~~~p~---~~l~~L~~L~l~~N~l 196 (625)
+|++|+.+.|.++ ++ .+.. .++++|+.+++.+|..
T Consensus 332 ~C~~L~~i~ip~s-v~-~I~~~aF~~C~~L~~i~~~~~~~ 369 (394)
T 4gt6_A 332 GCEQLERIAIPSS-VT-KIPESAFSNCTALNNIEYSGSRS 369 (394)
T ss_dssp TCTTCCEEEECTT-CC-BCCGGGGTTCTTCCEEEESSCHH
T ss_pred CCCCCCEEEECcc-cC-EEhHhHhhCCCCCCEEEECCcee
Confidence 8899999988655 54 3443 2788899999888754
No 438
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=95.54 E-value=0.00068 Score=63.01 Aligned_cols=86 Identities=15% Similarity=0.088 Sum_probs=47.4
Q ss_pred ccCCCCccEEEecCC-CCCcc----CCcccccccccccccccccccCCC----CC-CcccccccceecCCCccCCCC---
Q 006922 87 ISRLSALKILSLRSN-VITGY----FPSDFINLKSLCYLYLQFNNFSGT----LP-DFSVWKNLTIINLSDNGFNGT--- 153 (625)
Q Consensus 87 ~~~l~~L~~L~l~~N-~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~----~p-~~~~l~~L~~L~ls~N~l~~~--- 153 (625)
+.+-+.|+.|+|++| .|... +-..+..-+.|+.|+|++|++... +. .+..-+.|+.|+|++|.|...
T Consensus 37 l~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ 116 (197)
T 1pgv_A 37 REDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLA 116 (197)
T ss_dssp HTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHH
T ss_pred HhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHH
Confidence 445677888888875 66521 112233446677777777777521 11 133445677777777777532
Q ss_pred -CCCCccccccccceecccc
Q 006922 154 -IPRSLSNLTQLEALYLANN 172 (625)
Q Consensus 154 -~p~~l~~l~~L~~L~l~~N 172 (625)
+-..+..-+.|+.|+|++|
T Consensus 117 ala~aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 117 RLLRSTLVTQSIVEFKADNQ 136 (197)
T ss_dssp HHHHHTTTTCCCSEEECCCC
T ss_pred HHHHHHhhCCceeEEECCCC
Confidence 1122333345666666543
No 439
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=95.35 E-value=0.095 Score=48.99 Aligned_cols=99 Identities=10% Similarity=0.086 Sum_probs=64.6
Q ss_pred CChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCEEeCCCCCeeEecccccccccccccc
Q 006922 404 GSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPV 483 (625)
Q Consensus 404 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~ 483 (625)
-+|.+.|.... .+++++++..++.|.+++|.-+-.... + ..+=+.|..|++..+|.+...+ ..+.
T Consensus 33 vSL~eIL~~~~----~PlsEEqaWALc~Qc~~~L~~~~~~~~-~-~~~i~~~~~i~l~~dG~V~f~~-~~s~-------- 97 (229)
T 2yle_A 33 LSLEEILRLYN----QPINEEQAWAVCYQCCGSLRAAARRRQ-P-RHRVRSAAQIRVWRDGAVTLAP-AADD-------- 97 (229)
T ss_dssp EEHHHHHHHHT----SCCCHHHHHHHHHHHHHHHHHHHHTTC-C-CCCCCSGGGEEEETTSCEEECC-C-----------
T ss_pred ccHHHHHHHcC----CCcCHHHHHHHHHHHHHHHHhhhhccc-C-CceecCCcceEEecCCceeccc-cccc--------
Confidence 37888887654 379999999999999998876622111 1 1233456889999999887764 2111
Q ss_pred cccCCCcCCccccCCCCCCCccchhhhHHHHHHHHh
Q 006922 484 IARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILT 519 (625)
Q Consensus 484 ~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt 519 (625)
.....+.|||... ...+.+.=|||+|+++|.-+-
T Consensus 98 -~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALD 131 (229)
T 2yle_A 98 -AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALD 131 (229)
T ss_dssp ----------CCSS-SSSCHHHHHHHHHHHHHHHHT
T ss_pred -ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhh
Confidence 1122367888764 355678899999999999887
No 440
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=95.00 E-value=0.048 Score=56.61 Aligned_cols=107 Identities=18% Similarity=0.135 Sum_probs=48.4
Q ss_pred cCcccccCCCCccEEEecCCCCCccCCcccccccccccccccccc--------------------cCCCCC--Ccccccc
Q 006922 82 IPPNTISRLSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNN--------------------FSGTLP--DFSVWKN 139 (625)
Q Consensus 82 ~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~--------------------l~~~~p--~~~~l~~ 139 (625)
+....+.....|+.+.+..|... .....|.++..|+.+.+..+. ++ .++ .|..+.+
T Consensus 244 i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~~~~F~~~~~L~~i~l~~~i~-~I~~~aF~~c~~ 321 (394)
T 4fs7_A 244 LGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVPEKTFYGCSSLTEVKLLDSVK-FIGEEAFESCTS 321 (394)
T ss_dssp ECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEECTTTTTTCTTCCEEEECTTCC-EECTTTTTTCTT
T ss_pred cccccccccccceeEEcCCCcce-eeccccccccccceeccCceeeccccccccccccccccccccc-eechhhhcCCCC
Confidence 33445666666666666655432 223334444444444443332 22 121 3445555
Q ss_pred cceecCCCccCCCCCCCCccccccccceecccccccccCCCC--CCCCCcEEEcc
Q 006922 140 LTIINLSDNGFNGTIPRSLSNLTQLEALYLANNSLSGKIPDL--NLPNLQQLNLA 192 (625)
Q Consensus 140 L~~L~ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~L~l~ 192 (625)
|+.++|.++ ++..-..+|.+|++|+.+.+..| ++..-... ++.+|+.+++.
T Consensus 322 L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp 374 (394)
T 4fs7_A 322 LVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELP 374 (394)
T ss_dssp CCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEE
T ss_pred CCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEEC
Confidence 555555433 33222344555555555555444 33211111 44555555543
No 441
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=94.82 E-value=0.047 Score=56.64 Aligned_cols=103 Identities=12% Similarity=0.158 Sum_probs=62.0
Q ss_pred CCccCCcccccccccccccccccccCCCCCCcccccccceecCCCccCCCCCCCCccccccccceecccccccccCCCC-
Q 006922 103 ITGYFPSDFINLKSLCYLYLQFNNFSGTLPDFSVWKNLTIINLSDNGFNGTIPRSLSNLTQLEALYLANNSLSGKIPDL- 181 (625)
Q Consensus 103 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~- 181 (625)
++..-...|.++.+|+.+.+..+..+-.--.|..+.+|+.+.+. +.++..-...|.++.+|+.++|.+| ++..-...
T Consensus 253 v~~i~~~aF~~c~~L~~i~lp~~~~~I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF 330 (394)
T 4gt6_A 253 VARIETHAFDSCAYLASVKMPDSVVSIGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAF 330 (394)
T ss_dssp EEEECTTTTTTCSSCCEEECCTTCCEECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTT
T ss_pred ceEcccceeeecccccEEecccccceecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHh
Confidence 33334456777788888888665443111257777888888885 4455344557788888888888755 44222221
Q ss_pred -CCCCCcEEEcccCCCccccc-cccccCCC
Q 006922 182 -NLPNLQQLNLANNNLSGSIP-QSLKRFPS 209 (625)
Q Consensus 182 -~l~~L~~L~l~~N~l~g~~p-~~l~~~~~ 209 (625)
++.+|+.+.|..+ ++ .|+ .++..+.+
T Consensus 331 ~~C~~L~~i~ip~s-v~-~I~~~aF~~C~~ 358 (394)
T 4gt6_A 331 AGCEQLERIAIPSS-VT-KIPESAFSNCTA 358 (394)
T ss_dssp TTCTTCCEEEECTT-CC-BCCGGGGTTCTT
T ss_pred hCCCCCCEEEECcc-cC-EEhHhHhhCCCC
Confidence 6778888887544 54 332 34544443
No 442
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=94.67 E-value=0.037 Score=57.50 Aligned_cols=87 Identities=17% Similarity=0.189 Sum_probs=68.8
Q ss_pred cCcccccCCCCccEEEecCCCCCccCCcccccccccccccccccccCCCCC--CcccccccceecCCCccCCCCCCCCcc
Q 006922 82 IPPNTISRLSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSGTLP--DFSVWKNLTIINLSDNGFNGTIPRSLS 159 (625)
Q Consensus 82 ~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p--~~~~l~~L~~L~ls~N~l~~~~p~~l~ 159 (625)
++...+..+.+|+.+.+..+ ++..-...|.++.+|+.++|..+ ++ .+. .|..+.+|+.+++..| ++..-..+|.
T Consensus 288 i~~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~-~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~ 363 (394)
T 4fs7_A 288 VPEKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VE-EIGKRSFRGCTSLSNINFPLS-LRKIGANAFQ 363 (394)
T ss_dssp ECTTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CC-EECTTTTTTCTTCCEECCCTT-CCEECTTTBT
T ss_pred eccccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-cc-EEhHHhccCCCCCCEEEECcc-ccEehHHHhh
Confidence 44556778888999998765 66656678999999999999754 54 343 6889999999999877 6645567899
Q ss_pred ccccccceecccc
Q 006922 160 NLTQLEALYLANN 172 (625)
Q Consensus 160 ~l~~L~~L~l~~N 172 (625)
+|++|+.+++..|
T Consensus 364 ~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 364 GCINLKKVELPKR 376 (394)
T ss_dssp TCTTCCEEEEEGG
T ss_pred CCCCCCEEEECCC
Confidence 9999999999766
No 443
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=94.58 E-value=0.042 Score=56.59 Aligned_cols=133 Identities=20% Similarity=0.242 Sum_probs=92.7
Q ss_pred EEEEEcCCCCcccccCcccccCCCCccEEEecCCCCCccCCcccccccccccccccccccCCCCC--CcccccccceecC
Q 006922 68 VVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSGTLP--DFSVWKNLTIINL 145 (625)
Q Consensus 68 v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p--~~~~l~~L~~L~l 145 (625)
+..+.++.+ + ..+....+.+...|+.+.+..+ ++..-...|.++.+|+.+.+..+ +. .++ .|..+.+|+.+.+
T Consensus 219 l~~i~~~~~-~-~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~-~i~~~aF~~c~~L~~i~l 293 (379)
T 4h09_A 219 LKKITITSG-V-TTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VK-TVPYLLCSGCSNLTKVVM 293 (379)
T ss_dssp CSEEECCTT-C-CEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CS-EECTTTTTTCTTCCEEEE
T ss_pred cceeeeccc-e-eEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ce-eccccccccccccccccc
Confidence 444555433 2 2355566888999999999876 66556677888999999998755 33 233 5888999999999
Q ss_pred CCccCCCCCCCCccccccccceecccccccccCCCC---CCCCCcEEEcccCCCccccccccccCCCCcccCCC
Q 006922 146 SDNGFNGTIPRSLSNLTQLEALYLANNSLSGKIPDL---NLPNLQQLNLANNNLSGSIPQSLKRFPSSAFVGNS 216 (625)
Q Consensus 146 s~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~---~l~~L~~L~l~~N~l~g~~p~~l~~~~~~~~~~n~ 216 (625)
.+|.++..-..+|.++.+|+.+.|.++ ++ .+... ++.+|+.+.+. ..+..+..-+|.|..
T Consensus 294 ~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~aF~~C~~L~~i~ip---------~~v~~I~~~aF~~c~ 356 (379)
T 4h09_A 294 DNSAIETLEPRVFMDCVKLSSVTLPTA-LK-TIQVYAFKNCKALSTISYP---------KSITLIESGAFEGSS 356 (379)
T ss_dssp CCTTCCEECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCTTCCCCCCC---------TTCCEECTTTTTTSS
T ss_pred cccccceehhhhhcCCCCCCEEEcCcc-cc-EEHHHHhhCCCCCCEEEEC---------CccCEEchhHhhCCC
Confidence 999888555678999999999999765 54 33432 67778777653 334444455565543
No 444
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=94.55 E-value=0.13 Score=53.20 Aligned_cols=30 Identities=20% Similarity=0.262 Sum_probs=26.4
Q ss_pred CceecCCCCCCEEeCCC------CCeeEeccccccc
Q 006922 447 KLVHGNIKSSNIFLNSQ------QYGCVSDLGLTTI 476 (625)
Q Consensus 447 ~ivHrDlk~~NIll~~~------~~~kl~DfGla~~ 476 (625)
.++|+|+.+.||+++.+ +.+.++||..+..
T Consensus 245 v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~ 280 (401)
T 3f2s_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEE
T ss_pred eEEeccCCcccEEEcCCcccCcccceEEEeeccCCc
Confidence 58999999999999887 7899999987764
No 445
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=94.39 E-value=0.17 Score=52.94 Aligned_cols=142 Identities=10% Similarity=0.116 Sum_probs=82.9
Q ss_pred HcccCCceeEEEEEEcC--------CcEEEEEEeccccCChHHHHHHHHHHHcCCCCc-eecceeEEEecCceEEEEEec
Q 006922 331 VLGKGTFGMAYKAILED--------GTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHEN-VVELKAYYYSKDEKLMVYDYY 401 (625)
Q Consensus 331 ~lg~G~~g~Vy~~~~~~--------g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~n-iv~l~~~~~~~~~~~lv~e~~ 401 (625)
.+..|-...+|+....+ +..+++|+.........+..+|.+++..+...+ ..++++.+ .-++||||+
T Consensus 77 ~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~~idR~~E~~~l~~L~~~gi~P~l~~~~----~~~~I~efI 152 (424)
T 3mes_A 77 QIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGKFYDSKVELDVFRYLSNINIAPNIIADF----PEGRIEEFI 152 (424)
T ss_dssp EECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-CCCCHHHHHHHHHHHHHTTSSCCEEEEE----TTEEEEECC
T ss_pred EcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcchhcCHHHHHHHHHHHHhcCCCCCEEEEc----CCCEEEEEe
Confidence 36667788899888653 578888886543222234567888877774323 34455433 237899999
Q ss_pred cCCChhhh-----------------hccccC------C--CCccCCHHHHHHHHHHH-------------------HHHH
Q 006922 402 SLGSVSAM-----------------LHSERG------E--GRIPLDWDTRMRIAIGA-------------------ARGI 437 (625)
Q Consensus 402 ~~g~L~~~-----------------l~~~~~------~--~~~~l~~~~~~~i~~~i-------------------a~~l 437 (625)
++..+... +|.... . ...+--|.+..++..++ ...+
T Consensus 153 ~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~~L~~~~~~~p~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~e~ 232 (424)
T 3mes_A 153 DGEPLTTKQLQLTHICVEVAKNMGSLHIINSKRADFPSRFDKEPILFKRIYLWREEAKIQVSKNNFQIDKELYSKILEEI 232 (424)
T ss_dssp CSEECCTGGGGSHHHHHHHHHHHHHHHTHHHHCTTSCTTSCCSCCHHHHHHHHHHHHHHHHHTCC--CCHHHHHHHHHHH
T ss_pred CCccCChhhcCCHHHHHHHHHHHHHHhcCchhhccCccccCCCCcHHHHHHHHHHHHHHhhcccchhhccccHHHHHHHH
Confidence 98664320 111100 0 11122344443333222 2223
Q ss_pred HHHHhc---------------------CCCCceecCCCCCCEEeCCCCCeeEecccccccc
Q 006922 438 ARIHAA---------------------NGGKLVHGNIKSSNIFLNSQQYGCVSDLGLTTIT 477 (625)
Q Consensus 438 ~~LH~~---------------------~~~~ivHrDlk~~NIll~~~~~~kl~DfGla~~~ 477 (625)
.+|... ....++|+|+.+.||+ +.++.+.++||..+...
T Consensus 233 ~~L~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~~ 292 (424)
T 3mes_A 233 DQLEELIMGGEKFSMERALELKLYSPAFSLVFAHNDLQENNLL-QTQNNIRMIDYEYSAIN 292 (424)
T ss_dssp HHHHHHHHTSSCCCHHHHHHHHTTCGGGCEEEECSCCCGGGEE-ECSSCEEECCCTTCEEE
T ss_pred HHHHHHHhhhcccccccccccccccCCCCceEECCCCCcccee-cCCCcEEEEecccCCcC
Confidence 333211 1234899999999999 78889999999988653
No 446
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=93.99 E-value=0.0041 Score=57.71 Aligned_cols=84 Identities=13% Similarity=0.044 Sum_probs=57.1
Q ss_pred CeEEEEEcCCC-Ccccc---cCcccccCCCCccEEEecCCCCCccC----CcccccccccccccccccccCCCC-----C
Q 006922 66 KRVVAVRLPGV-GFSGL---IPPNTISRLSALKILSLRSNVITGYF----PSDFINLKSLCYLYLQFNNFSGTL-----P 132 (625)
Q Consensus 66 ~~v~~l~l~~~-~l~g~---~~~~~~~~l~~L~~L~l~~N~l~~~~----p~~~~~l~~L~~L~L~~N~l~~~~-----p 132 (625)
..++.|+|+++ ++... .-.+.+..=..|+.|+|++|.|...- -..+..=+.|+.|+|++|+|...- .
T Consensus 41 ~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~ 120 (197)
T 1pgv_A 41 TDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLR 120 (197)
T ss_dssp SSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHH
T ss_pred CCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHH
Confidence 45888999875 55321 01223666789999999999998322 122334478999999999997421 1
Q ss_pred CcccccccceecCCCcc
Q 006922 133 DFSVWKNLTIINLSDNG 149 (625)
Q Consensus 133 ~~~~l~~L~~L~ls~N~ 149 (625)
.+..-+.|+.|+|++|.
T Consensus 121 aL~~N~tL~~L~L~n~~ 137 (197)
T 1pgv_A 121 STLVTQSIVEFKADNQR 137 (197)
T ss_dssp HTTTTCCCSEEECCCCS
T ss_pred HHhhCCceeEEECCCCc
Confidence 35556779999998764
No 447
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=91.01 E-value=0.17 Score=33.92 Aligned_cols=9 Identities=22% Similarity=0.143 Sum_probs=3.6
Q ss_pred Hhhhhhccc
Q 006922 271 IVACCVRKK 279 (625)
Q Consensus 271 ~~~~~~~~~ 279 (625)
++++++||+
T Consensus 31 ~~~~~RRr~ 39 (44)
T 2ks1_B 31 IGLFMRRRH 39 (44)
T ss_dssp HHHHHHTTT
T ss_pred HHHHhhhhH
Confidence 334444433
No 448
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=90.95 E-value=0.13 Score=33.35 Aligned_cols=31 Identities=10% Similarity=0.138 Sum_probs=16.7
Q ss_pred ccccceeeehhhhHHHHHHHHHHHHHhhhhhc
Q 006922 246 RIGETTLLGIVIAASVLGLLAFLFLIVACCVR 277 (625)
Q Consensus 246 ~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~ 277 (625)
..+..++.+++++.++.++++.. +++++|+|
T Consensus 7 ~ls~GaIAGiVvG~v~gv~li~~-l~~~~~rr 37 (38)
T 2k1k_A 7 GLTGGEIVAVIFGLLLGAALLLG-ILVFRSRR 37 (38)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHH-HHHHHHCC
T ss_pred CCCCCceeeeehHHHHHHHHHHH-HHHHHeec
Confidence 34556777777776655444333 33444433
No 449
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=90.55 E-value=0.17 Score=33.84 Aligned_cols=10 Identities=20% Similarity=0.145 Sum_probs=4.0
Q ss_pred Hhhhhhcccc
Q 006922 271 IVACCVRKKR 280 (625)
Q Consensus 271 ~~~~~~~~~~ 280 (625)
++++++||++
T Consensus 30 ~~~~~RRRr~ 39 (44)
T 2l2t_A 30 FAVYVRRKSI 39 (44)
T ss_dssp HHHHHHTTCS
T ss_pred HHHHhhhhhh
Confidence 3344444433
No 450
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=88.86 E-value=0.99 Score=46.71 Aligned_cols=30 Identities=20% Similarity=0.357 Sum_probs=25.3
Q ss_pred ceecCCCCCCEEe------CCCCCeeEecccccccc
Q 006922 448 LVHGNIKSSNIFL------NSQQYGCVSDLGLTTIT 477 (625)
Q Consensus 448 ivHrDlk~~NIll------~~~~~~kl~DfGla~~~ 477 (625)
++|+|+.+.|||+ +++..+.++||..|..-
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~n 281 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSYN 281 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEEE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhccCC
Confidence 5799999999999 45667999999988754
No 451
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=85.13 E-value=0.49 Score=31.60 Aligned_cols=7 Identities=14% Similarity=0.581 Sum_probs=2.8
Q ss_pred eeehhhh
Q 006922 252 LLGIVIA 258 (625)
Q Consensus 252 ~~~i~i~ 258 (625)
+++.+++
T Consensus 14 Ia~~vVG 20 (44)
T 2jwa_A 14 IISAVVG 20 (44)
T ss_dssp HHHHHHH
T ss_pred hHHHHHH
Confidence 3334444
No 452
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=76.34 E-value=4.8 Score=37.38 Aligned_cols=117 Identities=9% Similarity=0.104 Sum_probs=77.8
Q ss_pred CCCCceecceeEEEecCceEEEEEeccCCChhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCC
Q 006922 376 IRHENVVELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIARIHAANGGKLVHGNIKS 455 (625)
Q Consensus 376 l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~ 455 (625)
..||+.+.. .+-...+...+.|+.-+.+-=...++ .++...+++++..++.-..+++. -+|--+.|
T Consensus 42 ~~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~ik--------~~~~~eKlr~l~ni~~l~~~~~~-----r~tf~L~P 107 (215)
T 4ann_A 42 QHSPYFIDA-ELTELRDSFQIHYDINDNHTPFDNIK--------SFTKNEKLRYLLNIKNLEEVNRT-----RYTFVLAP 107 (215)
T ss_dssp SCCTTBCCE-EEEECSSEEEEEECCCTTSEEGGGGG--------GSCHHHHHHHHHHGGGGGGGGGS-----SEECCCSG
T ss_pred ccCCcccce-EEEEcccEEEEEEEcCcccCCHHHHH--------hcCHHHHHHHHHHHHHHHHHhcC-----ceEEEEec
Confidence 468888876 45555666666665443222222232 26788899999999887755543 57888999
Q ss_pred CCEEeCCCCCeeEecccccccccccccccccCCCcCCccccCCCCCCCccchhhhHHHHHHHHhCCCCCC
Q 006922 456 SNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIH 525 (625)
Q Consensus 456 ~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~ 525 (625)
+|++++.++.+++.-.|+-..+. |.- .+...=.-.+=+++..+++++..|+
T Consensus 108 ~NL~f~~~~~p~i~~RGik~~l~--------------P~~-----~~ee~fL~qyKAliiall~~K~~Fe 158 (215)
T 4ann_A 108 DELFFTRDGLPIAKTRGLQNVVD--------------PLP-----VSEAEFLTRYKALVICAFNEKQSFD 158 (215)
T ss_dssp GGEEECTTSCEEESCCEETTTBS--------------CCC-----CCHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred ceEEEcCCCCEEEEEccCccCCC--------------CCC-----CCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 99999999999999888644332 211 1111222347788889999999884
No 453
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=75.17 E-value=0.36 Score=51.18 Aligned_cols=58 Identities=7% Similarity=0.064 Sum_probs=17.1
Q ss_pred hHcccCCceeEEEEEEcC-CcEEEE------EEeccccCC---hHHHHHHHHHHHcCCCCceecceeEEEe
Q 006922 330 EVLGKGTFGMAYKAILED-GTTVVV------KRLKDVNVG---KRDFEQQMEIVGSIRHENVVELKAYYYS 390 (625)
Q Consensus 330 ~~lg~G~~g~Vy~~~~~~-g~~vav------K~l~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~ 390 (625)
+.|| ||.||+|.+.. ..+||| |..+..... ...+.+|..++...+|||+++.+++...
T Consensus 148 ~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~ 215 (463)
T 3cxl_A 148 EHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH 215 (463)
T ss_dssp TTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEEE
T ss_pred ccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEEe
Confidence 3465 99999999753 468888 776653322 2457888899999999999999888654
No 454
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=74.84 E-value=6.2 Score=36.76 Aligned_cols=114 Identities=14% Similarity=0.089 Sum_probs=74.4
Q ss_pred CCCceecceeEEEecCceEEEEEeccCCChhhhhccccCCCCccCCHHHHHHHHHHHHHHHH-HHHhcCCCCceecCCCC
Q 006922 377 RHENVVELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTRMRIAIGAARGIA-RIHAANGGKLVHGNIKS 455 (625)
Q Consensus 377 ~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~-~LH~~~~~~ivHrDlk~ 455 (625)
.||++ -...-.+.+...+.|+.-+++.-...++ .++...+++++..++.-.. +++. -+|--+.|
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~--------~~~~~eKlrll~nl~~L~~~~~~~-----r~tf~l~P 112 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIR--------KTTLLSRIRAAIHLVSKVKHHSAR-----RLIFIVCP 112 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHH--------TSCHHHHHHHHHHHHHHHSSCCSS-----SEECCCCG
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHH--------hcCHHHHHHHHHHHHHHHHHhhhC-----ceeEEEeC
Confidence 57777 3333455666667676554433333332 2677889999988887555 3432 67888999
Q ss_pred CCEEeCCCCCeeEecccccccccccccccccCCCcCCccccCCCCCCCccch-hhhHHHHHHHHhCCCCCC
Q 006922 456 SNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVTDSRKATQASDV-YSFGVVLLEILTGKSPIH 525 (625)
Q Consensus 456 ~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv-wS~Gvil~elltG~~p~~ 525 (625)
+|+++|.++.+++.-.|+-..+ +|.-+ + ..|. -.+=+++..++.++..|+
T Consensus 113 ~NL~f~~~~~p~i~hRGi~~~l--------------pP~e~-----~-ee~fl~qyKali~all~~K~~Fe 163 (219)
T 4ano_A 113 ENLMFNRALEPFFLHVGVKESL--------------PPDEW-----D-DERLLREVKATVLALTEGEYRFD 163 (219)
T ss_dssp GGEEECTTCCEEESCCEETTTB--------------SSCSC-----C-HHHHHHHHHHHHHHHTTCSSCHH
T ss_pred ceEEEeCCCcEEEEEcCCcccC--------------CCCCC-----C-HHHHHHHHHHHHHHHHcCCCCHH
Confidence 9999999999999988864433 22221 1 1222 246778888888888774
No 455
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=73.22 E-value=2 Score=28.66 Aligned_cols=29 Identities=14% Similarity=0.267 Sum_probs=12.3
Q ss_pred eehhhhHHHHHHHHHHHHHhhhhhccccc
Q 006922 253 LGIVIAASVLGLLAFLFLIVACCVRKKRE 281 (625)
Q Consensus 253 ~~i~i~~~~~~~~~~~~~~~~~~~~~~~~ 281 (625)
..++.+++.+++++++.+.++++.|||++
T Consensus 12 ~~Ia~~vVGvll~vi~~l~~~~~~RRR~~ 40 (44)
T 2jwa_A 12 TSIISAVVGILLVVVLGVVFGILIKRRQQ 40 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCS
T ss_pred cchHHHHHHHHHHHHHHHHHHhheehhhh
Confidence 33444444433333334444455454443
No 456
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=66.35 E-value=4.9 Score=29.05 Aligned_cols=18 Identities=28% Similarity=0.104 Sum_probs=9.1
Q ss_pred hhhhHHHHHHHHHHHHHh
Q 006922 255 IVIAASVLGLLAFLFLIV 272 (625)
Q Consensus 255 i~i~~~~~~~~~~~~~~~ 272 (625)
+++|+++.+++++.+.++
T Consensus 12 ivlGg~~~lll~~glcI~ 29 (70)
T 2klu_A 12 IVLGGVAGLLLFIGLGIF 29 (70)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHH
Confidence 566655555444444344
No 457
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=64.97 E-value=4.8 Score=26.89 Aligned_cols=16 Identities=13% Similarity=0.276 Sum_probs=7.5
Q ss_pred HHHHHhhhhhccccch
Q 006922 267 FLFLIVACCVRKKRED 282 (625)
Q Consensus 267 ~~~~~~~~~~~~~~~~ 282 (625)
+++++...+...||++
T Consensus 23 v~ii~~~~~~~~RRRr 38 (44)
T 2l2t_A 23 LVIVGLTFAVYVRRKS 38 (44)
T ss_dssp HHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhhhhh
Confidence 3333444555555543
No 458
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=63.85 E-value=4.8 Score=26.90 Aligned_cols=12 Identities=8% Similarity=0.108 Sum_probs=5.9
Q ss_pred Hhhhhhccccch
Q 006922 271 IVACCVRKKRED 282 (625)
Q Consensus 271 ~~~~~~~~~~~~ 282 (625)
+...+...||++
T Consensus 28 ~~~~~~~~RRr~ 39 (44)
T 2ks1_B 28 ALGIGLFMRRRH 39 (44)
T ss_dssp HHHHHHHHHTTT
T ss_pred HHHHHHHhhhhH
Confidence 444455555543
No 459
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=24.68 E-value=4.7e+02 Score=25.75 Aligned_cols=78 Identities=8% Similarity=0.004 Sum_probs=43.0
Q ss_pred ceEEEEEeccCCChhhhhccccCCCCccCCHHHHHHHHHHH--HHHHHHHHhcC-CCCcee-cCCCCCCEEeCCCCC-ee
Q 006922 393 EKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTRMRIAIGA--ARGIARIHAAN-GGKLVH-GNIKSSNIFLNSQQY-GC 467 (625)
Q Consensus 393 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i--a~~l~~LH~~~-~~~ivH-rDlk~~NIll~~~~~-~k 467 (625)
..+++|||.+|..|.+.-+.... ..+.. +.+.++ .-++.++.... ..+.+. ..-.+.|||++.++. +.
T Consensus 156 ~~~l~meyv~G~~L~e~~~~~~~---~~f~~----~~~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~n~~~~ 228 (342)
T 1cja_A 156 ANILLMELVRGITLNKLTTTSAP---EVLTK----STMQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSERGATVV 228 (342)
T ss_dssp SEEEEEECCCEEESTTCCSSSHH---HHSCH----HHHHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESBTTCEE
T ss_pred cceehhhhcCCCccccchhhhhh---hhcCH----HHHHhhchhheehhhhcCCccCcccccCCCChhheEEeCCCCeEE
Confidence 45699999997666544332100 00222 222222 23445555443 223222 235788999987655 78
Q ss_pred Eecccccccc
Q 006922 468 VSDLGLTTIT 477 (625)
Q Consensus 468 l~DfGla~~~ 477 (625)
++|-+++...
T Consensus 229 ~IDhn~af~~ 238 (342)
T 1cja_A 229 PIDSKIIPLD 238 (342)
T ss_dssp ECSCCCCCCC
T ss_pred EEcCCccccC
Confidence 8999887654
Done!