Query 006923
Match_columns 625
No_of_seqs 261 out of 792
Neff 6.2
Searched_HMMs 29240
Date Mon Mar 25 12:32:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006923.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006923hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ogz_A UDP-sugar pyrophosphory 100.0 8E-135 3E-139 1127.3 44.0 570 36-623 6-618 (630)
2 3gue_A UTP-glucose-1-phosphate 100.0 7.6E-96 3E-100 798.3 32.0 441 86-583 29-482 (484)
3 3r3i_A UTP--glucose-1-phosphat 100.0 7.6E-96 3E-100 803.3 27.0 454 51-583 53-520 (528)
4 2yqc_A UDP-N-acetylglucosamine 100.0 1.1E-90 3.7E-95 767.5 34.5 452 38-531 5-479 (486)
5 1jv1_A Glcnac1P uridyltransfer 100.0 2.1E-86 7.2E-91 735.8 38.1 459 39-531 3-485 (505)
6 2oeg_A UTP-glucose-1-phosphate 100.0 1.1E-88 3.7E-93 751.1 17.8 440 86-587 29-491 (505)
7 3oc9_A UDP-N-acetylglucosamine 100.0 1.1E-82 3.6E-87 684.6 27.8 368 127-531 20-397 (405)
8 2icy_A Probable UTP-glucose-1- 100.0 5.3E-80 1.8E-84 678.6 30.5 453 67-583 7-464 (469)
9 2i5k_A UTP--glucose-1-phosphat 100.0 7E-79 2.4E-83 673.1 28.4 456 54-583 20-480 (488)
10 3st8_A Bifunctional protein GL 98.5 1.1E-05 3.8E-10 89.0 23.8 190 140-396 12-204 (501)
11 4ecm_A Glucose-1-phosphate thy 97.8 0.00053 1.8E-08 69.3 16.3 181 140-395 24-207 (269)
12 4fce_A Bifunctional protein GL 97.8 0.00095 3.2E-08 72.0 19.2 64 140-219 8-71 (459)
13 2qh5_A PMI, ALGA, mannose-6-ph 97.6 0.00033 1.1E-08 72.4 12.8 192 140-396 4-204 (308)
14 3oam_A 3-deoxy-manno-octuloson 97.6 0.00026 9E-09 71.0 11.0 185 140-395 2-197 (252)
15 1fxo_A Glucose-1-phosphate thy 97.5 0.0011 3.8E-08 68.1 14.2 150 141-342 3-155 (293)
16 3brk_X Glucose-1-phosphate ade 97.5 0.0012 4.2E-08 70.8 15.0 205 139-395 11-221 (420)
17 1yp2_A Glucose-1-phosphate ade 97.5 0.0011 3.7E-08 71.8 14.4 216 140-396 20-246 (451)
18 2y6p_A 3-deoxy-manno-octuloson 97.3 0.0011 3.7E-08 64.9 11.3 113 140-314 2-115 (234)
19 1lvw_A Glucose-1-phosphate thy 97.3 0.0032 1.1E-07 64.8 15.1 70 141-225 4-76 (295)
20 3k8d_A 3-deoxy-manno-octuloson 97.3 0.0016 5.4E-08 66.2 12.0 187 140-395 18-213 (264)
21 1h7e_A 3-deoxy-manno-octuloson 97.2 0.0011 3.6E-08 65.5 10.1 126 140-324 2-129 (245)
22 1mc3_A Glucose-1-phosphate thy 97.2 0.0018 6.3E-08 66.7 11.6 70 141-225 4-76 (296)
23 3tqd_A 3-deoxy-manno-octuloson 97.2 0.0017 5.9E-08 65.6 11.0 188 140-394 9-205 (256)
24 3pnn_A Conserved domain protei 97.1 0.0079 2.7E-07 61.9 15.5 147 140-323 5-155 (303)
25 2v0h_A Bifunctional protein GL 97.0 0.008 2.8E-07 64.6 15.3 64 140-219 5-68 (456)
26 1hm9_A GLMU, UDP-N-acetylgluco 97.0 0.005 1.7E-07 66.6 12.8 180 142-395 13-194 (468)
27 2xwl_A 2-C-methyl-D-erythritol 97.0 0.001 3.4E-08 64.5 6.6 64 140-217 2-65 (223)
28 1vic_A 3-deoxy-manno-octuloson 96.9 0.0029 9.9E-08 63.4 9.9 128 140-324 2-130 (262)
29 1qwj_A Cytidine monophospho-N- 96.9 0.0059 2E-07 59.9 11.8 129 140-322 3-132 (229)
30 3q80_A 2-C-methyl-D-erythritol 96.9 0.0013 4.4E-08 65.5 7.0 65 140-218 7-71 (231)
31 2wee_A MOBA-related protein; u 96.9 0.00078 2.7E-08 63.9 5.1 61 140-218 5-65 (197)
32 2waw_A MOBA relate protein; un 96.9 0.00073 2.5E-08 64.1 4.5 61 140-218 5-65 (199)
33 3f1c_A Putative 2-C-methyl-D-e 96.8 0.0012 4.1E-08 65.8 5.6 68 140-221 3-71 (246)
34 1ezi_A CMP-N-acetylneuraminic 96.7 0.0024 8.1E-08 62.4 6.9 60 140-219 4-63 (228)
35 3juk_A UDP-glucose pyrophospho 96.7 0.003 1E-07 63.8 7.8 64 141-220 3-69 (281)
36 1tzf_A Glucose-1-phosphate cyt 96.7 0.0018 6.1E-08 64.3 5.9 158 141-334 3-167 (259)
37 2yc3_A 2-C-methyl-D-erythritol 96.7 0.00093 3.2E-08 65.2 3.7 41 140-183 4-44 (228)
38 1i52_A 4-diphosphocytidyl-2-C- 96.6 0.0011 3.9E-08 65.0 4.0 41 140-183 7-47 (236)
39 1vgw_A 4-diphosphocytidyl-2C-m 96.5 0.0011 3.9E-08 64.5 3.4 64 140-219 6-69 (231)
40 2vsh_A TARI, 2-C-methyl-D-eryt 96.5 0.0021 7.3E-08 62.6 5.2 65 141-219 3-68 (236)
41 1vpa_A 2-C-methyl-D-erythritol 96.5 0.0013 4.6E-08 64.3 3.6 41 140-183 13-53 (234)
42 3d5n_A Q97W15_sulso; NESG, SSR 96.4 0.0019 6.6E-08 62.1 4.3 38 140-182 2-39 (197)
43 1e5k_A Molybdopterin-guanine d 96.4 0.0021 7.1E-08 62.2 4.5 39 140-182 6-44 (201)
44 3rsb_A Adenosylcobinamide-phos 96.4 0.0023 7.9E-08 60.9 4.5 61 142-219 2-62 (196)
45 2px7_A 2-C-methyl-D-erythritol 96.3 0.0023 7.7E-08 63.4 3.8 37 140-180 25-61 (236)
46 1jyk_A LICC protein, CTP:phosp 96.1 0.0035 1.2E-07 62.8 4.0 41 140-183 25-68 (254)
47 3ngw_A Molybdopterin-guanine d 96.1 0.0032 1.1E-07 61.6 3.6 37 141-182 1-37 (208)
48 4fcu_A 3-deoxy-manno-octuloson 96.0 0.023 7.8E-07 57.2 10.0 126 141-323 2-130 (253)
49 2x65_A Mannose-1-phosphate gua 96.0 0.0061 2.1E-07 63.9 5.5 192 142-396 3-206 (336)
50 2e3d_A UTP--glucose-1-phosphat 95.9 0.008 2.7E-07 61.4 5.7 64 140-219 8-74 (302)
51 4evw_A Nucleoside-diphosphate- 95.8 0.0018 6.1E-08 65.2 0.7 38 143-183 2-42 (255)
52 2ux8_A Glucose-1-phosphate uri 95.8 0.0069 2.4E-07 61.8 4.8 64 140-219 14-80 (297)
53 2e8b_A Probable molybdopterin- 95.7 0.0017 5.9E-08 62.6 0.1 39 140-183 14-52 (201)
54 2xme_A CTP-inositol-1-phosphat 95.5 0.0058 2E-07 59.9 2.8 42 138-183 16-57 (232)
55 2pa4_A UTP-glucose-1-phosphate 95.3 0.012 4E-07 61.0 4.7 62 141-218 13-77 (323)
56 1w55_A ISPD/ISPF bifunctional 95.1 0.013 4.3E-07 62.6 4.2 41 140-183 3-43 (371)
57 2cu2_A Putative mannose-1-phos 94.7 0.02 7E-07 59.9 4.4 40 141-183 3-47 (337)
58 2dpw_A Hypothetical protein TT 93.9 0.034 1.2E-06 54.5 3.9 40 140-183 2-44 (232)
59 2ggo_A 401AA long hypothetical 93.8 0.034 1.2E-06 58.7 3.9 59 142-219 2-63 (401)
No 1
>3ogz_A UDP-sugar pyrophosphorylase; LEFT handed beta helix, rossmann fold, UDP sugar pyrophospho transferase; 2.03A {Leishmania major} PDB: 3oh3_A* 3oh1_A* 3oh0_A* 3oh2_A* 3oh4_A*
Probab=100.00 E-value=8.2e-135 Score=1127.33 Aligned_cols=570 Identities=35% Similarity=0.599 Sum_probs=511.3
Q ss_pred ChhHHHHHHHHHH--CCCccccccccc-CCCCHHHHHHHHHHHhhcCCCCCccHHHHHHHHHHHHhhccCCCCCCCCCC-
Q 006923 36 SSEQVELAKMLME--MGQSHLFEKWAA-PGVDDNEKRAFFDQVAKLNSSYPGGLKSYIKTARELLADSKAGKNPFDGFT- 111 (625)
Q Consensus 36 ~~~~~~l~~~L~~--~gQ~HL~~~~~~-~~~~~~ek~~Ll~qL~~id~~~~~~l~~y~~~~~~~l~~s~~~~~~~~~~~- 111 (625)
.++.++|+++|.+ +||+|||+||++ ++.+++||++|++||.+||..|++||.+|++++++++ .+..+.++++.+.
T Consensus 6 ~~~~~~L~~~l~~~~~gQ~HLf~~w~~~l~~~~~e~~~L~~qL~~~d~~~~~gl~~~~~~a~~~l-~~~~~~~~~~~~~p 84 (630)
T 3ogz_A 6 NSNLQALREELCTPGLDQGHLFEGWPETVDECNERQIALLTDLYMFSNMYPGGVAQYIRNGHELL-ARESEEVDFAALEM 84 (630)
T ss_dssp HHHHHHHHHHHTSTTTCCGGGGTTCCSSGGGCCHHHHHHHHHHHHGGGTSTTHHHHHHHHHHHHH-HHHTSCCCCSEEEC
T ss_pred hhhHHHHHHHhhhccCCchhhhhhcccccCCCHHHHHHHHHHHHhhChhhhhhHHHHHHHHHHHh-hccccCCccccccc
Confidence 3566889999997 999999999998 4433899999999999999999999999999999999 4455667778887
Q ss_pred -CCCCCcccccCCCchhhHHHHHHHHhhcceEEEEEcCCccccCCccCCcccCCCcCCCCcchHHHHHHHHHHHHHHhhh
Q 006923 112 -PSVPTGEVLKFGDDTFINYEQAGVKEAKNAAFVLVAGGLGERLGYNGIKVALPAETTTGTCFLQNYIECILALQESSCR 190 (625)
Q Consensus 112 -p~vP~~~~l~~~~~~~~~~~~~G~~~l~kvavvlLaGGlGTRLG~~~pK~~lpv~~~~~~s~lql~~~~i~~l~~~~~~ 190 (625)
|.+|.+..++.+++++.+|+++|+++|+|+|||+||||||||||+++||+++|+++++++||||++++||+ ++++
T Consensus 85 ~P~~~~~~~l~~~~~~~~~~~~~Gl~~i~kvavvllaGGlGTRLG~~~pK~~lpv~~~s~ks~lql~~e~i~---~~~g- 160 (630)
T 3ogz_A 85 PPLIFEAPSLHRRTAERTALENAGTAMLCKTVFVLVAGGLGERLGYSSIKVSLPVETATNTTYLAYYLRWAQ---RVGG- 160 (630)
T ss_dssp CSCEEECCCTTCCCHHHHHHHHHHHHHGGGEEEEEECCCEEGGGTEEEEGGGSBSCTTTCCBHHHHHHHHHH---HHHC-
T ss_pred CCCCCccccccCCHHHHHHHHHHhHHHHhhceEEEecCCcccccCCCCCcccceecCCCCCcHHHHHHHHHH---HHhC-
Confidence 33345667777778889999999999999999999999999999999999999999999999999999999 3454
Q ss_pred hccCCcccccEEEecCccchHHHHHHHHhCCCCCCCCCcEEEEEecceeEEecCCCceecCCCCCCccccccCCCchhhH
Q 006923 191 LAEGKCQEIPFAIMTSDDTHSRTQELLESNSYFGMKPTQVKLLKQEKVACLDDNDARLAMDPKNKYRIQTKPHGHGDVHA 270 (625)
Q Consensus 191 ~~~g~~~~iPl~IMTS~~T~~~T~~~l~~~~~FGl~~~~V~~F~Q~~~P~l~~~~g~~~l~~~~~~~i~~~P~GhGdi~~ 270 (625)
+.||||||||++||++|++||++ ||++++||+||+|+++||+++++|++++ +++++++|+|+||||+|.
T Consensus 161 ------~~iPl~IMTS~~T~~~T~~~~~~---fgl~~~~V~~F~Q~~~P~i~~~~g~l~l--~~~~~i~~~P~GhGdv~~ 229 (630)
T 3ogz_A 161 ------KEVPFVIMTSDDTHDRTLQLLRE---LQLEVPNLHVLKQGQVFCFADSAAHLAL--DETGKLLRKPHGHGDVHS 229 (630)
T ss_dssp ------TTCCEEEEECTTTHHHHHHHHHH---TTCCCTTEEEEECCCEECBSSTTCCBCB--CTTSSBCEECCCTTHHHH
T ss_pred ------CCCcEEEEecccchHHHHHHHHH---hCCCcccEEEEEcCCEEEEecCCCceee--cCCCcccCCCCCCHHHHH
Confidence 58999999999999999999999 9999999999999999999878899999 667899999999999999
Q ss_pred HHhhcC------------------hHHHHHHcCceEEEEEeCCCccccccchHHHHHHhhcCCceeeeeccCCccCccce
Q 006923 271 LLYSSG------------------LLKEWHDAGLKWVLFFQDTNGLLFKAIPASLGVSATKQYHVNSLAVPRKAKEAIGG 332 (625)
Q Consensus 271 aL~~sG------------------lL~~l~~~G~~yi~v~~vDN~L~~~~DP~~lG~~~~~~~~~~~kvv~r~~~E~vG~ 332 (625)
+|+++| +|++|+++|+||+||+||||+|++++||.||||++.++++|++|||+|+|+|++|+
T Consensus 230 aL~~sG~~~~~~~~~~~~~~~~~~lLd~l~~~Gieyi~v~~vDN~L~~~~DP~~lG~~~~~~~d~~~kvv~r~p~E~vG~ 309 (630)
T 3ogz_A 230 LIYNATVKRDVVPDSGDGTATAQPLVNDWLAAGYESIVFIQDTNAGATITIPISLALSAEHSLDMNFTCIPRVPKEPIGL 309 (630)
T ss_dssp HHHHCBC--------------CCBHHHHHHHTTCCEEEEECTTBTTHHHHHHHHHHHHHHTTCSEEEEEECCCSSCSSCE
T ss_pred HHHHcCCCcccccccccccccHHHHHHHHHHcCCEEEEEEccCCccccccCHHHhHHHHhcCCCEEEEEEECCCCcceee
Confidence 999999 99999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEecCCCce-eEEEEeccCccHHHHhcCCCCCC-CCCCCCCCCCccceeeEEEehhhhHHHHhhccCccccccCCccc
Q 006923 333 ITRLTHADGRS-MVINVEYNQLDPLLRATGFPDGD-VNCETGYSPFPGNINQLILELGPYMEELKKTGGAIKEFVNPKYK 410 (625)
Q Consensus 333 i~~~~~~dG~~-~v~nVEYsel~~~l~~~~~~~g~-l~~~~gf~~f~gNinn~~~~l~~l~~~l~~~~~~lp~~vnpK~~ 410 (625)
+|++++.||++ +|+||||+|++++++..++++|+ +.+.++|++||||||||||+|++|.+.+.++++.||+||||||.
T Consensus 310 l~~~~~~dGk~~~v~vVEYsei~~~~~~~~~~~g~~~~~~~~~~~f~GNtNnl~~~L~a~~~~l~~~~~~ip~~vNpK~~ 389 (630)
T 3ogz_A 310 LCRTKKNSGDPWLVANVEYNVFAEVSRALNKDGGDEVSDPTGFSPFPGSVNTLVFKLSSYVDRLRESHGIVPEFINPKYS 389 (630)
T ss_dssp EEEEESSTTSCCEEEEECHHHHHHHHHHC------------CCCSSCEEEEEEEEEHHHHHHHHHHHTTCCCCEECCCBS
T ss_pred EEEEecCCCceeeeeEEEeccCCHhHhhccCCCccccccccccccccccceeeeEEHHHHHHHHHhccCccceecCCccc
Confidence 99988899999 88889999999999999999998 77788899999999999999999999999888999999999999
Q ss_pred CCCCCcccCchhHhHhhccccccCCCCC-ceeEEEeeccceeecccCCCcccc-cCCCCCCCCChhhHHHHHHHHHHHHH
Q 006923 411 DASKTSFKSSTRLECMMQDYPKTLPPSA-KVGFTVMDTWLAYAPVKNNPEDAA-KVPKGNPYHSATSGEMAIYCANSLIL 488 (625)
Q Consensus 411 d~~~~~~~~~~rLE~~m~D~~~~f~~~~-~~g~~~v~R~~~FsPvKN~~~~~~-~~~~g~~~dsp~t~~~dl~~~~~~~L 488 (625)
|.+++.+++++||||||||++++|+..+ ++++++|+| .||+||||++++|+ |+++|++.|||.||++|||+++++||
T Consensus 390 d~~~~~~~~~~qLEt~m~d~~~~F~~~~~~v~~~~V~R-~~F~PVKn~~~~a~~k~~~g~~~~sp~t~~~dly~~~~~~L 468 (630)
T 3ogz_A 390 DETRRSFKKPARIESLMQDIALLFSEDDYRVGGTVFER-FSYQPVKNSLEEAAGLVAQGNGAYCAATGEAAFYELQRRRL 468 (630)
T ss_dssp SSSSCCBSSCBCEECCGGGGGGGCCTTTCCEEEEECCG-GGCCBCCBCHHHHHHHHHTTCCCCBHHHHHHHHHHHHHHHH
T ss_pred CCcccccCcchhhhhHHHHHHHhccccCcceeEEEECC-CeeecccCChhHhhhhhccCCCcCChHHHHHHHHHHHHHHH
Confidence 9999889999999999999999997445 889999999 99999999998884 46999999999999999999999999
Q ss_pred HHcCCccc---CCcccccCCe-eecCCCeEEEcCCCCCC--HHHHhhhcCC--CCccCCCceEEEEeceEEecCeEEEeE
Q 006923 489 RKAGAQVD---DPVQEVFNGQ-EVEVWPRLTWKPKWGLT--FSEIKNKVSG--SCSVSQKSTMVIKGRNVVLEDLSLNGA 560 (625)
Q Consensus 489 ~~~G~~v~---~~~~~~~~g~-~~~~~P~i~l~p~~~~~--~~~~~~k~~~--~~~i~~~s~L~v~G~~~~~~~v~l~G~ 560 (625)
++||++|+ ++...+++|. .++.+|+|.|+|+|+.+ ++++++||++ +++|+++|+|+|+|+ ++++||.|||+
T Consensus 469 ~~aG~~v~~~~~~~~~~~~~~~~~~~~P~i~l~p~~~~~~~~~~~~~k~~~~~~~~i~~~S~L~veg~-v~~~~l~LdG~ 547 (630)
T 3ogz_A 469 KAIGLPLFYSSQPEVTVAKDAFGVRLFPIIVLDTVCASSGSLDDLARVFPTPEKVHIDQHSTLIVEGR-VIIESLELYGA 547 (630)
T ss_dssp HHTTCCCCCCCSCSEEETTTTEEECCCSEEEECHHHHTTCCHHHHHHHCSSGGGEEECTTCEEEEESS-EEESCEEEESE
T ss_pred HHcCceecccccchhhhhcCccccCCCCEEEEeccccccccHHHHHHHhCCCCCceecCCcEEEEEEE-EEEEEEEEeeE
Confidence 99999998 4666678888 89999999999999999 9999999999 789999999999999 99999999999
Q ss_pred EEEEcCCCCe----eEeCCeeEccceeEeeC----CCCCCCCcccceeccceeeeeeeEEEEecCCCcccc
Q 006923 561 LIIDSVDDAE----VRVGGKVQNKGWTLEPV----DHKDTSVPEEIRIRGFKINKLEQLERSYSEPGKFSL 623 (625)
Q Consensus 561 liI~a~~g~~----~~i~~~v~N~g~~~~~~----~~~~~~~~~~~~~rg~~~~~~~~~~~~~~~~g~~~~ 623 (625)
|+|.|++|++ |.++++|+|+||+|+++ +++|+++||++|||||+++|+|+++++|++||+|..
T Consensus 548 lvI~a~~~~~~~~~v~~~~~v~n~g~~~~~~~~~~~~~~~~~~~~~~irg~~~~~~e~~~~~~~~~~~~~~ 618 (630)
T 3ogz_A 548 LTIRGPTDSMALPHVVRNAVVRNAGWSVHAILSLCAGRDSRLSEVDRIRGFVLKKTAMAVMDCNTKGESEA 618 (630)
T ss_dssp EEEECCSSTTSCCEEECSEEEECCCCEEEECCTTC----CCCCHHHHTTTEEEECCCCEEECC--------
T ss_pred EEEEcCCCCccCceEEecceEecCCcEEEEcccccccccCCCChhhcccceeEEeeeEEEEEecCCCcccc
Confidence 9999999999 88888999999999999 777889999999999999999999999999999974
No 2
>3gue_A UTP-glucose-1-phosphate uridylyltransferase 2; phosphatase, UDP, structural GE structural genomics consortium, SGC; HET: UPG PG4; 1.92A {Trypanosoma brucei}
Probab=100.00 E-value=7.6e-96 Score=798.32 Aligned_cols=441 Identities=18% Similarity=0.184 Sum_probs=372.6
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCCCCCCCCcccccCCCchhhHHHHHHHHhhcceEEEEEcCCccccCCccCCcccCCC
Q 006923 86 LKSYIKTARELLADSKAGKNPFDGFTPSVPTGEVLKFGDDTFINYEQAGVKEAKNAAFVLVAGGLGERLGYNGIKVALPA 165 (625)
Q Consensus 86 l~~y~~~~~~~l~~s~~~~~~~~~~~p~vP~~~~l~~~~~~~~~~~~~G~~~l~kvavvlLaGGlGTRLG~~~pK~~lpv 165 (625)
+..|.+.+.++++.. .+..+|+.+.| |. ...+|++..... .|+++|+|+|||+||||||||||+++||+++|+
T Consensus 29 ~~~f~~~~~~~~~~~-~~~i~~~~i~p--~~-~~~~~~~l~~~~---~G~~~L~kvavvlLaGGlGTRLG~~~pKg~~~v 101 (484)
T 3gue_A 29 IHIFLIQHALVRKGE-TGYIPEKSISP--VE-SLPFLQGIETKG---ENTALLRQAVVLKLNGGLGTGMGLNGPKSLLQV 101 (484)
T ss_dssp HHHHHHHHHHHHTTC-CCCCCGGGCEE--CC-CCCBHHHHCCSS---CCHHHHTTEEEEEEECCCCGGGTCSSCGGGSEE
T ss_pred HHHHHHHHHHHhcCC-CCccCHhhCCC--hh-ccCChhhcCCch---HHHHHHhhcEEEEEcCCcccccCCCCCceeeec
Confidence 456666777776653 35689999987 33 344443321111 699999999999999999999999999999999
Q ss_pred cCCCCcchHHHHHHHHHHHHHHhhhhccCCcccccEEEecCccchHHHHHHHHhCCCCCCCCCcEEEEEecceeEEecCC
Q 006923 166 ETTTGTCFLQNYIECILALQESSCRLAEGKCQEIPFAIMTSDDTHSRTQELLESNSYFGMKPTQVKLLKQEKVACLDDND 245 (625)
Q Consensus 166 ~~~~~~s~lql~~~~i~~l~~~~~~~~~g~~~~iPl~IMTS~~T~~~T~~~l~~~~~FGl~~~~V~~F~Q~~~P~l~~~~ 245 (625)
. +++||||++++||++++++++ +.||||||||+.||++|++||++|+|||+++++|++|+|+++||++.++
T Consensus 102 ~--sgksflql~~eqI~~l~~~~~-------~~iPl~IMTS~~T~~~T~~~~~k~~~Fgl~~~~v~~F~Q~~~P~i~~dg 172 (484)
T 3gue_A 102 K--NGQTFLDFTALQLEHFRQVRN-------CNVPFMLMNSFSTSGETKNFLRKYPTLYEVFDSDIELMQNRVPKIRQDN 172 (484)
T ss_dssp E--TTEEHHHHHHHHHHHHHHHHT-------CCCCEEEEECTTTHHHHHHHGGGCHHHHTTCCCCCEEECCCEECEETTT
T ss_pred C--CCCcHHHHHHHHHHHHHHHcC-------CCceEEEECCcchhHHHHHHHHhCcccCCCccceEEEEeCceeeEecCC
Confidence 5 899999999999999999986 5899999999999999999999999999999999999999999998655
Q ss_pred CceecCCCCCCccccccCCCchhhHHHhhcChHHHHHHcCceEEEEEeCCCccccccchHHHHHHhhcCCceeeeeccCC
Q 006923 246 ARLAMDPKNKYRIQTKPHGHGDVHALLYSSGLLKEWHDAGLKWVLFFQDTNGLLFKAIPASLGVSATKQYHVNSLAVPRK 325 (625)
Q Consensus 246 g~~~l~~~~~~~i~~~P~GhGdi~~aL~~sGlL~~l~~~G~~yi~v~~vDN~L~~~~DP~~lG~~~~~~~~~~~kvv~r~ 325 (625)
+++++++ ++++++|+|+||||+|.+|++||+|++|+++|+||+||+|||| |++++||.|||||++++++|++|||+|+
T Consensus 173 ~~~i~~~-~~~~i~~~P~GhGdiy~aL~~sGiLd~l~~~Gieyi~v~~vDN-L~a~~Dp~~lG~~~~~~~d~~~kvv~Kt 250 (484)
T 3gue_A 173 FFPVTYE-ADPTCEWVPPGHGDVYTVLYSSGKLDYLLGKGYRYMFISNGDN-LGATLDVRLLDYMHEKQLGFLMEVCRRT 250 (484)
T ss_dssp CCBCCCT-TCGGGGEECCCGGGHHHHHHHHSHHHHHHHTTCCEEEEEETTC-TTCCCCHHHHHHHHHTTCSEEEEEEECC
T ss_pred CceeecC-CCCceeeccCCchHHHHHHHhCCcHHHHHHcCCEEEEEEcCCC-cccccCHHHHHHHHhcCCCEEEEEEECC
Confidence 5555433 4569999999999999999999999999999999999999999 9999999999999999999999999997
Q ss_pred c-cCccceEEEE-------ecCCCceeEEEEeccCccHHHHhcCCCCCCCCCCCCCCCCccceeeEEEehhhhHHHHhhc
Q 006923 326 A-KEAIGGITRL-------THADGRSMVINVEYNQLDPLLRATGFPDGDVNCETGYSPFPGNINQLILELGPYMEELKKT 397 (625)
Q Consensus 326 ~-~E~vG~i~~~-------~~~dG~~~v~nVEYsel~~~l~~~~~~~g~l~~~~gf~~f~gNinn~~~~l~~l~~~l~~~ 397 (625)
+ .|++|++|++ ++.||++++ |||+|+++..+.. ..+.+||++| ||||+|+++.+|++++++.
T Consensus 251 ~~dekgG~l~~~~~~~~~~~~~dG~~~v--vEyseip~e~~~~------f~~~~g~~~F--NtnNi~~~l~~l~~~l~~~ 320 (484)
T 3gue_A 251 ESDKKGGHLAYKDVIDETTGQTRRRFVL--RESAQCPKEDEDS------FQNIAKHCFF--NTNNIWINLMELKKMMDEQ 320 (484)
T ss_dssp TTCCSSEEEEEEC--------CCCEEEE--EEGGGSCGGGHHH------HTCTTTSCEE--EEEEEEEEHHHHHHHHHHT
T ss_pred CCCCceeEEEEEccccccccCCCCCEEE--EEeccCCHHHHhh------hcCCCCceEe--EeeeEEEEHHHHHHHHHhc
Confidence 5 5677778876 356899887 9999998876653 1223457777 9999999999999999886
Q ss_pred c--CccccccCCcccCCCCCcccCchhHhHhhccccccCCCCCceeEEEeeccceeecccCCCcccccCCCCCCCCChhh
Q 006923 398 G--GAIKEFVNPKYKDASKTSFKSSTRLECMMQDYPKTLPPSAKVGFTVMDTWLAYAPVKNNPEDAAKVPKGNPYHSATS 475 (625)
Q Consensus 398 ~--~~lp~~vnpK~~d~~~~~~~~~~rLE~~m~D~~~~f~~~~~~g~~~v~R~~~FsPvKN~~~~~~~~~~g~~~dsp~t 475 (625)
. ..||+|+|+|++|..+...++++|||+||||++++|+ ++++++|+| +||+||||++++. +
T Consensus 321 ~g~~~Lp~~vn~K~id~~k~~~~~~iqlE~~~~d~~~~~~---~~~~ieV~R-~rF~PvKn~sdLl-------------~ 383 (484)
T 3gue_A 321 LGVLRLPVMRNPKTVNPQDSQSTKVYQLEVAMGAAISLFD---RSEAVVVPR-ERFAPVKTCSDLL-------------A 383 (484)
T ss_dssp TTCCCCCCEEEEEESSTTCTTSCEEEEEECCGGGGGTTSS---SEEEEECCG-GGCCCCSSHHHHH-------------H
T ss_pred cCcCCCCcEeccceecCCCCCCCCEeehHHHHHHHHHhCC---ccEEEEECh-hhccccccchHHH-------------H
Confidence 3 4679999999999877777889999999999998874 567889999 8999999999874 4
Q ss_pred HHHHHHHHHHHHHHHcCCcccCCcccccCCeeecCCCeEEEcCCCCCCHHHHhhhcCC-CCccCCCceEEEEeceEEecC
Q 006923 476 GEMAIYCANSLILRKAGAQVDDPVQEVFNGQEVEVWPRLTWKPKWGLTFSEIKNKVSG-SCSVSQKSTMVIKGRNVVLED 554 (625)
Q Consensus 476 ~~~dl~~~~~~~L~~~G~~v~~~~~~~~~g~~~~~~P~i~l~p~~~~~~~~~~~k~~~-~~~i~~~s~L~v~G~~~~~~~ 554 (625)
+++|+|.+.. |+.+ ..+.......|.|.|+|.+++++++|.+||++ +|+|.++++|+|+|||+||+|
T Consensus 384 ~~Sdly~l~~------~~~l------~~~~~~~~~~P~v~L~~~~~~~v~~f~~rf~~giPsl~~~~~L~V~Gdv~fg~~ 451 (484)
T 3gue_A 384 LRSDAYQVTE------DQRL------VLCEERNGKPPAIDLDGEHYKMIDGFEKLVKGGVPSLRQCTSLTVRGLVEFGAD 451 (484)
T ss_dssp HHSTTEEECT------TSCE------EECGGGTTCCCEEEECTTTSSSHHHHHHHHTTCCCBCTTEEEEEEESSEEECTT
T ss_pred HhhhceeccC------CceE------EeccccCCCCCeEEECchhcCcHHHHHHhcCCCCCChhhCCEEEEecceEECCC
Confidence 4555554332 2221 11111234579999999988999999999998 899999999999999999999
Q ss_pred eEEEeEEEEEcCCCCeeEeCC--eeEcccee
Q 006923 555 LSLNGALIIDSVDDAEVRVGG--KVQNKGWT 583 (625)
Q Consensus 555 v~l~G~liI~a~~g~~~~i~~--~v~N~g~~ 583 (625)
|+|+|+|+|+|++|.+++|++ +++|+-+.
T Consensus 452 v~l~G~v~i~~~~g~~~~ip~g~~l~~~~~~ 482 (484)
T 3gue_A 452 VSVRGNVVIKNLKEEPLIIGSGRVLDNEVVV 482 (484)
T ss_dssp CEEEEEEEEEECSSSCEEECTTCEEESCEEE
T ss_pred cEEEEEEEEEcCCCCeeecCCCCEecceecC
Confidence 999999999999999999986 99998654
No 3
>3r3i_A UTP--glucose-1-phosphate uridylyltransferase; rossmann fold, beta barrel, nucleotidyltransferase; 3.57A {Homo sapiens} PDB: 3r2w_A
Probab=100.00 E-value=7.6e-96 Score=803.25 Aligned_cols=454 Identities=17% Similarity=0.183 Sum_probs=374.0
Q ss_pred CcccccccccCCCCHHHHHHHHHHHhhcCCCCCccHHHHHHHHHHHHhhccCCCCCCCCCCCCCCCcccccCCCchhhHH
Q 006923 51 QSHLFEKWAAPGVDDNEKRAFFDQVAKLNSSYPGGLKSYIKTARELLADSKAGKNPFDGFTPSVPTGEVLKFGDDTFINY 130 (625)
Q Consensus 51 Q~HL~~~~~~~~~~~~ek~~Ll~qL~~id~~~~~~l~~y~~~~~~~l~~s~~~~~~~~~~~p~vP~~~~l~~~~~~~~~~ 130 (625)
|.||+++|+++. +++|+.|.+|++.+ ...++++++.. ....+|+.+.| +|++.+.+|.+. ..|
T Consensus 53 ~~~l~~~~~~l~--~~~~~~~~~el~~f-----------~~lf~r~l~~~-~~~~~~~~i~p-~p~~~~~~~~~l--~~~ 115 (528)
T 3r3i_A 53 KKELEKILTTAS--SHEFEHTKKDLDGF-----------RKLFHRFLQEK-GPSVDWGKIQR-PPEDSIQPYEKI--KAR 115 (528)
T ss_dssp TSSSTTTSSSCC--TTTTHHHHHHHHHH-----------HHHHHHHHHC--------CCCCC-CCTTTSEEHHHH--TTS
T ss_pred HHHHHHHHHhcC--HHHHHHHHHHHHHH-----------HHHHHHHHhhc-cCCCCHHHCcC-CCHHHccCHhhc--CCc
Confidence 999999999965 77999999999886 33444555443 23567888887 477777666432 122
Q ss_pred HHH--HHHhhcceEEEEEcCCccccCCccCCcccCCCcCCCCcchHHHHHHHHHHHHHHhhhhccCCcccccEEEecCcc
Q 006923 131 EQA--GVKEAKNAAFVLVAGGLGERLGYNGIKVALPAETTTGTCFLQNYIECILALQESSCRLAEGKCQEIPFAIMTSDD 208 (625)
Q Consensus 131 ~~~--G~~~l~kvavvlLaGGlGTRLG~~~pK~~lpv~~~~~~s~lql~~~~i~~l~~~~~~~~~g~~~~iPl~IMTS~~ 208 (625)
+.. ...+++|+|||+||||||||||+++||+++|+ ++++||||++++||++++++|+ +.||||||||++
T Consensus 116 ~~~~~~~~~l~kvavvlLaGGlGTRLG~~~PK~~i~V--~sgktflql~~eqI~~l~~~~g-------~~IPl~IMTS~~ 186 (528)
T 3r3i_A 116 GLPDNISSVLNKLVVVKLNGGLGTSMGCKGPKSLIGV--RNENTFLDLTVQQIEHLNKTYN-------TDVPLVLMNSFN 186 (528)
T ss_dssp CCCCSSCTTCTTEEEEEECCCBCTTTTCSSBGGGSEE--ETTEEHHHHHHHHHHHHHHHHT-------CCCCEEEEECTT
T ss_pred cccchhhhhcCceEEEEeCCCCccccCCCCCccceec--CCCCcHHHHHHHHHHHHHHHhC-------CCCCEEEEeccc
Confidence 222 24567799999999999999999999999998 6899999999999999999886 589999999999
Q ss_pred chHHHHHHHHhCCCCCCCCCcEEEEEecceeEEecCCCceecCCC----CCCccccccCCCchhhHHHhhcChHHHHHHc
Q 006923 209 THSRTQELLESNSYFGMKPTQVKLLKQEKVACLDDNDARLAMDPK----NKYRIQTKPHGHGDVHALLYSSGLLKEWHDA 284 (625)
Q Consensus 209 T~~~T~~~l~~~~~FGl~~~~V~~F~Q~~~P~l~~~~g~~~l~~~----~~~~i~~~P~GhGdi~~aL~~sGlL~~l~~~ 284 (625)
||++|++||++|+||| .||++|+|+++||++ .+|++++... ++++++|+|+||||+|.+|++||+|++|+++
T Consensus 187 T~~~T~~~f~k~~~fg---~~V~~F~Q~~~P~i~-~dg~l~l~~~~~~~~~~~~~~~P~GhGdiy~aL~~sGlLd~l~~~ 262 (528)
T 3r3i_A 187 TDEDTKKILQKYNHCR---VKIYTFNQSRYPRIN-KESLLPVAKDVSYSGENTEAWYPPGHGDIYASFYNSGLLDTFIGE 262 (528)
T ss_dssp THHHHHSSCGGGTTSS---CCEEEEECCCBCCEE-TTTCCCC-------------CBCCBTTTHHHHHHHHSHHHHHHHT
T ss_pred hhHHHHHHHHhcCccC---CCeEEEEeCCeeeEe-cCCceecccccccCCCcceeeCcCCChHHHHHHHHCChHHHHHhc
Confidence 9999999999999998 589999999999996 5788888321 2779999999999999999999999999999
Q ss_pred CceEEEEEeCCCccccccchHHHHHHhhc----CCceeeeeccCC-ccCccceEEEEecCCCceeEEEEeccCccHHHHh
Q 006923 285 GLKWVLFFQDTNGLLFKAIPASLGVSATK----QYHVNSLAVPRK-AKEAIGGITRLTHADGRSMVINVEYNQLDPLLRA 359 (625)
Q Consensus 285 G~~yi~v~~vDN~L~~~~DP~~lG~~~~~----~~~~~~kvv~r~-~~E~vG~i~~~~~~dG~~~v~nVEYsel~~~l~~ 359 (625)
|+||+||+||||+++. +||.||||++.+ +++|++|||+|+ |.|++|++|+. ||++++ |||+|++++.+.
T Consensus 263 Gieyi~v~nvDNlga~-vDp~~Lg~~~~~~~~~~~d~~~kVv~Kt~~dek~Gvl~~~---dGk~~v--vEyseip~e~~~ 336 (528)
T 3r3i_A 263 GKEYIFVSNIDNLGAT-VDLYILNHLMNPPNGKRCEFVMEVTNKTRADVKGGTLTQY---EGKLRL--VEIAQVPKAHVD 336 (528)
T ss_dssp TCCEEEEEETTBTTCC-CCHHHHHHHSSCSSSCCCSEEEEECCCCTTCCSSCEEECS---SSSCEE--ECTTSSCGGGTT
T ss_pred CCEEEEEEccCCcccc-cCHHHHHHHHhcccccCCcEEEEEeEccccCCcccEEEEE---CCeEEE--EEecCCChhHhh
Confidence 9999999999997655 699999999998 999999999985 88999999965 999877 999999886533
Q ss_pred cCCCCCCCCCCCCCCCCc-cceeeEEEehhhhHHHHhhccCccccccCCcccCCCCCcccCchhHhHhhccccccCCCCC
Q 006923 360 TGFPDGDVNCETGYSPFP-GNINQLILELGPYMEELKKTGGAIKEFVNPKYKDASKTSFKSSTRLECMMQDYPKTLPPSA 438 (625)
Q Consensus 360 ~~~~~g~l~~~~gf~~f~-gNinn~~~~l~~l~~~l~~~~~~lp~~vnpK~~d~~~~~~~~~~rLE~~m~D~~~~f~~~~ 438 (625)
+++|++.|+ ||||||||+|++|+++++...+.||+|||||+.|.+. +++|||++|||++++|++.
T Consensus 337 ---------~~~g~~~f~~~Ntnnlw~~L~~L~~v~~~~~l~Lp~ivn~K~vd~~~----~viqlEt~igd~i~~f~~~- 402 (528)
T 3r3i_A 337 ---------EFKSVSKFKIFNTNNLWISLAAVKRLQEQNAIDMEIIVNAKTLDGGL----NVIQLETAVGAAIKSFENS- 402 (528)
T ss_dssp ---------TSSCSSSCCCCEEEEEEEEHHHHHHHHHTTCCCCCCEEEEECCSSSS----CEEEEEBCSTTCSTTSSSC-
T ss_pred ---------ccCCcccCCeEEEEEEEEEHHHHHHHHHhCCCCCCceecCcccCCCC----CEEEeHHHHHHHHHhccCc-
Confidence 345544454 7999999999999999998888999999999998543 6789999999999998653
Q ss_pred ceeEEEeeccceeecccCCCcccccCCCCCCCCChhhHHHHHHHHHHHHHHHcCCcccCCcccccCCeeecCCCeEEEcC
Q 006923 439 KVGFTVMDTWLAYAPVKNNPEDAAKVPKGNPYHSATSGEMAIYCANSLILRKAGAQVDDPVQEVFNGQEVEVWPRLTWKP 518 (625)
Q Consensus 439 ~~g~~~v~R~~~FsPvKN~~~~~~~~~~g~~~dsp~t~~~dl~~~~~~~L~~~G~~v~~~~~~~~~g~~~~~~P~i~l~p 518 (625)
..++|+|+ ||+||||++++. ..++|+|.+.+ |.-+..+. +.....|.|.|+|
T Consensus 403 --~~i~VpR~-rF~PvKn~sdLl-------------l~~Sdly~l~~------g~l~~~~~------r~~~~~P~v~L~~ 454 (528)
T 3r3i_A 403 --LGINVPRS-RFLPVKTTSDLL-------------LVMSNLYSLNA------GSLTMSEK------REFPTVPLVKLGS 454 (528)
T ss_dssp --CCEECCGG-GCCBCCSHHHHH-------------HHHSTTSEEET------TEEECCSS------CSSCCCCEEEECT
T ss_pred --EEEEEehH-HcccccchHHHH-------------HHhcceeEeeC------CeEEeccc------ccCCCCCEEEeCc
Confidence 34699995 599999999984 55666555443 32222322 2345679999999
Q ss_pred CCCCCHHHHhhhcCCCCccCCCceEEEEeceEEecCeEEEeEEEEEcCCCCeeEeCC--eeEcccee
Q 006923 519 KWGLTFSEIKNKVSGSCSVSQKSTMVIKGRNVVLEDLSLNGALIIDSVDDAEVRVGG--KVQNKGWT 583 (625)
Q Consensus 519 ~~~~~~~~~~~k~~~~~~i~~~s~L~v~G~~~~~~~v~l~G~liI~a~~g~~~~i~~--~v~N~g~~ 583 (625)
. ++++++|.+||+++|+|.++++|+|+|||+||+||+|+|+|+|+|++|.+++||+ +++|+-+.
T Consensus 455 ~-~~~v~~f~~rf~~iP~l~~~~~LtV~Gdv~fg~~v~l~G~v~i~~~~g~~~~ip~g~~len~~v~ 520 (528)
T 3r3i_A 455 S-FTKVQDYLRRFESIPDMLELDHLTVSGDVTFGKNVSLKGTVIIIANHGDRIDIPPGAVLENKIVS 520 (528)
T ss_dssp T-SCSHHHHHHHCSSCCEEEEEEEEEEESEEECCTTCEEEEEEEEECCTTCEEECCTTCEEEEEEEC
T ss_pred c-cCcHHHHHHhCCCCCCcccCCEEEEecceEECCCcEEEEEEEEEcCCCCceecCCCCEEeccEEe
Confidence 9 6899999999999999999999999999999999999999999999999999986 99998554
No 4
>2yqc_A UDP-N-acetylglucosamine pyrophosphorylase; uridine-diphospho-N- acetylglucosamine, N-acetylglucosamine-1-phosphate, transferase; 1.90A {Candida albicans} PDB: 2yqh_A* 2yqj_A* 2yqs_A*
Probab=100.00 E-value=1.1e-90 Score=767.47 Aligned_cols=452 Identities=21% Similarity=0.312 Sum_probs=386.5
Q ss_pred hHHHHHHHHHHCCCcccccccccCCCCHHHHHHHHHHHhhc-CCCCCccHHHHHHHHHHHHhhccCCCCCCCCCCCCCCC
Q 006923 38 EQVELAKMLMEMGQSHLFEKWAAPGVDDNEKRAFFDQVAKL-NSSYPGGLKSYIKTARELLADSKAGKNPFDGFTPSVPT 116 (625)
Q Consensus 38 ~~~~l~~~L~~~gQ~HL~~~~~~~~~~~~ek~~Ll~qL~~i-d~~~~~~l~~y~~~~~~~l~~s~~~~~~~~~~~p~vP~ 116 (625)
...+++++|+++||+|||+||+++ +++||++|++||.++ |+ .++.+|++++.+ .++ .+.+++...|+|+
T Consensus 5 ~~~~l~~~l~~~gQ~hl~~~~~~l--~~~ek~~l~~ql~~~~d~---~~l~~~~~~~~~---~~~--~~~~~~~i~p~p~ 74 (486)
T 2yqc_A 5 SQQQIIDSFKQANQDQLFQYYDSL--TIDQQQEFIDQLSTIEEP---AKLISTVEQAIQ---FSQ--TNSTSRNFTQLPN 74 (486)
T ss_dssp CHHHHHHHHHHTTCGGGGTTGGGS--CHHHHHHHHHHHHTSSSH---HHHHHHHHHHHH---HTC------CCCEECCCG
T ss_pred hHHHHHHHHHHcCcHHHhhhhccC--CHHHHHHHHHHHHhCcCH---HHHHHHHHHHHh---ccc--cccccccccCCCh
Confidence 467899999999999999999996 499999999999999 85 467888888864 222 2234442334788
Q ss_pred cccccC---CCchhhHHHHHHHHhhc--ceEEEEEcCCccccCCccCCcccCCCcCCCCcchHHHHHHHHHHHHHHhhhh
Q 006923 117 GEVLKF---GDDTFINYEQAGVKEAK--NAAFVLVAGGLGERLGYNGIKVALPAETTTGTCFLQNYIECILALQESSCRL 191 (625)
Q Consensus 117 ~~~l~~---~~~~~~~~~~~G~~~l~--kvavvlLaGGlGTRLG~~~pK~~lpv~~~~~~s~lql~~~~i~~l~~~~~~~ 191 (625)
+...++ +++.+.+|++.|+++|+ |+|+|+||||+|||||+++||+++|+.+++++||||+++++|++++++|.+.
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~G~~~i~~gkvavvlLaGG~GTRLg~~~PK~l~~v~l~~gk~~l~~~~e~l~~~~~~~~~~ 154 (486)
T 2yqc_A 75 EQTASTLDLSKDILQNWTELGLKAIGNGEVAVLLMAGGQGTRLGSSAPKGCFNIELPSQKSLFQIQAEKILKIEQLAQQY 154 (486)
T ss_dssp GGEEETTTSCHHHHHHHHHHHHHHHHTTCEEEEEEEESBCGGGTCSSBGGGCBCCCTTCCBHHHHHHHHHHHHHHHHHHH
T ss_pred hhccccccCChHHHHHHHHHHHHHHhhCCeEEEEEcCCccccCCCCCCCccceecCCCCCcHHHHHHHHHHHHHHHhhhh
Confidence 776555 34567789999999996 8999999999999999999999999998899999999999999999998543
Q ss_pred ccC--CcccccEEEecCccchHHHHHHHHhCCCCCCCCCcEEEEEecceeEEecCCC-ceecCCCCCCccccccCCCchh
Q 006923 192 AEG--KCQEIPFAIMTSDDTHSRTQELLESNSYFGMKPTQVKLLKQEKVACLDDNDA-RLAMDPKNKYRIQTKPHGHGDV 268 (625)
Q Consensus 192 ~~g--~~~~iPl~IMTS~~T~~~T~~~l~~~~~FGl~~~~V~~F~Q~~~P~l~~~~g-~~~l~~~~~~~i~~~P~GhGdi 268 (625)
+| +.+.||||||||+.||+.|++||++|+|||++.++|+||+|+++||++ .+| ++++ ++++.++|+|+||||+
T Consensus 155 -~G~~~~~~ip~~ImtS~~t~~~t~~~~~~~~~fgl~~~~v~~f~Q~~~P~i~-~dg~~i~l--~~~~~i~~~P~G~Ggi 230 (486)
T 2yqc_A 155 -LKSTKKPIINWYIMTSGPTRNATESFFIENNYFGLNSHQVIFFNQGTLPCFN-LQGNKILL--ELKNSICQSPDGNGGL 230 (486)
T ss_dssp -HTCSSCCCCEEEEEECGGGHHHHHHHHHHTGGGGSCGGGEEEEECCEEECBC-TTSSSBCE--EETTEECEEECCGGGH
T ss_pred -cCCCcCCccCEEEEECCCCHHHHHHHHhhccccCCCcceEEEEecccceeEc-CCCCcccc--CCCCccccCcCCchHH
Confidence 23 335899999999999999999999999999999999999999999996 489 9999 6788999999999999
Q ss_pred hHHHhhcChHHHHHHcCceEEEEEeCCCccccccchHHHHHHhhcCCceeeeeccC-CccCccceEEEEecCCCceeEEE
Q 006923 269 HALLYSSGLLKEWHDAGLKWVLFFQDTNGLLFKAIPASLGVSATKQYHVNSLAVPR-KAKEAIGGITRLTHADGRSMVIN 347 (625)
Q Consensus 269 ~~aL~~sGlL~~l~~~G~~yi~v~~vDN~L~~~~DP~~lG~~~~~~~~~~~kvv~r-~~~E~vG~i~~~~~~dG~~~v~n 347 (625)
|.+|+++|+|++|+++|++|++|+|+||+|++++||.||||++.++++++++||+| .|.|++|++|+. ..||+.++
T Consensus 231 ~~aL~~sG~Ld~l~~~G~~yi~v~~vDN~l~~~~Dp~~lg~~~~~~~~~~~~vv~k~~~~e~~Gvl~~~-~~dg~~~v-- 307 (486)
T 2yqc_A 231 YKALKDNGILDDLNSKGIKHIHMYCVDNCLVKVADPIFIGFAIAKKFDLATKVVRKRDANESVGLIVLD-QDNQKPCV-- 307 (486)
T ss_dssp HHHHHHTTHHHHHHHHTCCEEEEEETTBTTCCTTCHHHHHHHHHHTCSEEEEEEECCSTTCCCCEEEEE-TTTTEEEE--
T ss_pred HHHHHHcCcHHHHHhcCCeEEEEECCCCceeeccCHHHHHHHHHcCCCEEEEEEEcCCCCCceeEEEEE-ecCCCEEE--
Confidence 99999999999999999999999999999999999999999999999999999998 688999999864 24788776
Q ss_pred EeccCccHHHHhcCCCC--CCCCCCCCCCCCccceeeEEEehhhhHHHHhhccCc---cccccCCc---ccCCCCCccc-
Q 006923 348 VEYNQLDPLLRATGFPD--GDVNCETGYSPFPGNINQLILELGPYMEELKKTGGA---IKEFVNPK---YKDASKTSFK- 418 (625)
Q Consensus 348 VEYsel~~~l~~~~~~~--g~l~~~~gf~~f~gNinn~~~~l~~l~~~l~~~~~~---lp~~vnpK---~~d~~~~~~~- 418 (625)
|||+|++++++...+++ |.+ +++++|||||||++++|++++.+..+. ||.|+|+| |.|.+.+.++
T Consensus 308 vEy~E~~~~~~~~~~~~~~~~~------~~~~~Ni~~~~~~l~~L~~~l~~~~~~~~~lp~~v~~Kki~~~d~~~g~~~~ 381 (486)
T 2yqc_A 308 IEYSEISQELANKKDPQDSSKL------FLRAANIVNHYYSVEFLNKMIPKWISSQKYLPFHIAKKKIPSLNLENGEFYK 381 (486)
T ss_dssp ECGGGSCHHHHHCEETTEEEEE------SSCEEEEEEEEEEHHHHHHHHHHHTTCTTTSCCEEEEECCCEECTTTCCEEC
T ss_pred EEEecCCHHHhhcccccccccc------cccceeEEEEEEeHHHHHHHHHhhcCcccCCcceEeccccCccccccCeecc
Confidence 99999999988766443 333 355889999999999999978766667 99999998 7775433332
Q ss_pred ----CchhHhHhhccccccCCCCCceeEEEeeccceeecccCCCcccccCCCCCCCCChhhHHHHHHHHHHHHHHHcCCc
Q 006923 419 ----SSTRLECMMQDYPKTLPPSAKVGFTVMDTWLAYAPVKNNPEDAAKVPKGNPYHSATSGEMAIYCANSLILRKAGAQ 494 (625)
Q Consensus 419 ----~~~rLE~~m~D~~~~f~~~~~~g~~~v~R~~~FsPvKN~~~~~~~~~~g~~~dsp~t~~~dl~~~~~~~L~~~G~~ 494 (625)
+++||||||||++.+++ ..++++++|+|++|||||||+++.+ .|||+||+.|||++|++||++||+.
T Consensus 382 p~~pn~~klE~~~~d~~~~~~-l~~~~~~~V~R~~~FsPvKn~~~~~--------~dsp~ta~~~l~~~~~~~l~~aG~~ 452 (486)
T 2yqc_A 382 PTEPNGIKLEQFIFDVFPSVE-LNKFGCLEVDRLDEFSPLKNADGAK--------NDTPTTCRNHYLERSSKWVIQNGGV 452 (486)
T ss_dssp CSSCCEEEEECCGGGGGGGSC-GGGEEEEEECHHHHCCBCCSCTTSS--------SSSHHHHHHHHHHHHHHHHHHTTCE
T ss_pred CCCCCeeeeeehHhhHHhhcc-cCceEEEEECcccceeeecCCCCCC--------CCCHHHHHHHHHHHHHHHHHHCCCe
Confidence 35799999999977763 1277899999999999999998864 7999999999999999999999999
Q ss_pred ccCCcccccCCeeecCCCeEEEcCCCCCCHHHHhhhc
Q 006923 495 VDDPVQEVFNGQEVEVWPRLTWKPKWGLTFSEIKNKV 531 (625)
Q Consensus 495 v~~~~~~~~~g~~~~~~P~i~l~p~~~~~~~~~~~k~ 531 (625)
+.+. ..++++|+|+|+ |+.++.+++|.
T Consensus 453 ~~~~-------~~~eisp~~sy~---ge~l~~~~~~~ 479 (486)
T 2yqc_A 453 IDNQ-------GLVEVDSKTSYG---GEGLEFVNGKH 479 (486)
T ss_dssp ECTT-------CCCBCCTTTCSS---STTCGGGTTCE
T ss_pred ecCC-------CcEEEcceeeEC---CCCchhhcCcc
Confidence 8643 248999999999 77777666543
No 5
>1jv1_A Glcnac1P uridyltransferase isoform 1: AGX1; nucleotidyltransferase, alternative splicing; HET: UD1; 1.90A {Homo sapiens} SCOP: c.68.1.5 PDB: 1jv3_A* 1jvg_A* 1jvd_A* 1vm8_A*
Probab=100.00 E-value=2.1e-86 Score=735.79 Aligned_cols=459 Identities=22% Similarity=0.309 Sum_probs=385.8
Q ss_pred HHHHHHHHHHCCCcccccccccCCCCHHHHHHHHHHHhhcCCCCCccHHHHHHHHHHHHhhccCCCCCCCCCCCCCCCcc
Q 006923 39 QVELAKMLMEMGQSHLFEKWAAPGVDDNEKRAFFDQVAKLNSSYPGGLKSYIKTARELLADSKAGKNPFDGFTPSVPTGE 118 (625)
Q Consensus 39 ~~~l~~~L~~~gQ~HL~~~~~~~~~~~~ek~~Ll~qL~~id~~~~~~l~~y~~~~~~~l~~s~~~~~~~~~~~p~vP~~~ 118 (625)
..+|+++|.++||+|||+||+++ +++||++|++||.++|.. ++..|++++.+.++.|+++....+.+.| +|++.
T Consensus 3 ~~~l~~~l~~~gQ~hl~~~~~~l--~~~ek~~l~~ql~~~d~~---~~~~~~~~~~~~~~~s~~~~~~~~~i~p-~p~~~ 76 (505)
T 1jv1_A 3 INDLKLTLSKAGQEHLLRFWNEL--EEAQQVELYAELQAMNFE---ELNFFFQKAIEGFNQSSHQKNVDARMEP-VPREV 76 (505)
T ss_dssp HHHHHHHHHHTTCGGGGTTGGGS--CHHHHHHHHHHHHTCCHH---HHHHHHHHHHHCC-----------CCBC-CCGGG
T ss_pred HHHHHHHHHHcCcHHHHhhhhcC--CHHHHHHHHHHHHHhCHH---HHHHHHHHHHHhhhhccccCcccccccC-CChHh
Confidence 46799999999999999999996 499999999999999964 5778888887655444333222345655 78877
Q ss_pred cccC--CCchhhHHHHHHHHhhc--ceEEEEEcCCccccCCccCCcccCCCcCCCCcchHHHHHHHHHHHHHHhhhhccC
Q 006923 119 VLKF--GDDTFINYEQAGVKEAK--NAAFVLVAGGLGERLGYNGIKVALPAETTTGTCFLQNYIECILALQESSCRLAEG 194 (625)
Q Consensus 119 ~l~~--~~~~~~~~~~~G~~~l~--kvavvlLaGGlGTRLG~~~pK~~lpv~~~~~~s~lql~~~~i~~l~~~~~~~~~g 194 (625)
..++ +.+++.+|++.|+++|+ |+|+|+||||+|||||+++||+++|+++++++||||+++++|+++|+++.+. +|
T Consensus 77 ~~~~~~~~~~~~~~~~~Gl~~i~~~kvavViLAGG~GTRLg~~~PK~l~pv~~~~gk~~le~~~e~l~~lq~la~~~-~G 155 (505)
T 1jv1_A 77 LGSATRDQDQLQAWESEGLFQISQNKVAVLLLAGGQGTRLGVAYPKGMYDVGLPSRKTLFQIQAERILKLQQVAEKY-YG 155 (505)
T ss_dssp EEETTTTGGGHHHHHHHHHHHHHTTCEEEEEECCCCCCTTSCSSCGGGCCCCCTTCCCHHHHHHHHHHHHHHHHHHH-HS
T ss_pred cccccCChHHHHHHHHHhHHhhccCceEEEEEcCCccccCCCCCCCccceeecCCCCcHHHHHHHHHHHHHHHHHHh-cC
Confidence 7666 34567789999999985 9999999999999999999999999998999999999999999999987543 45
Q ss_pred CcccccEEEecCccchHHHHHHHHhCCCCCCCCCcEEEEEecceeEEecCCCceecCCCCCCccccccCCCchhhHHHhh
Q 006923 195 KCQEIPFAIMTSDDTHSRTQELLESNSYFGMKPTQVKLLKQEKVACLDDNDARLAMDPKNKYRIQTKPHGHGDVHALLYS 274 (625)
Q Consensus 195 ~~~~iPl~IMTS~~T~~~T~~~l~~~~~FGl~~~~V~~F~Q~~~P~l~~~~g~~~l~~~~~~~i~~~P~GhGdi~~aL~~ 274 (625)
..+.|||+||||+.||+.|++||++|+|||+++++|++|+|+++||++ .+|++++ ++++.++|+|+||||+|.+|++
T Consensus 156 ~~~~ip~vImtS~~t~e~t~~~f~~~~~fGl~~~~I~~f~Q~~~P~i~-~~g~~~l--~~~~~~e~~P~GtGG~~~~L~~ 232 (505)
T 1jv1_A 156 NKCIIPWYIMTSGRTMESTKEFFTKHKYFGLKKENVIFFQQGMLPAMS-FDGKIIL--EEKNKVSMAPDGNGGLYRALAA 232 (505)
T ss_dssp SCCCCCEEEEECTTTHHHHHHHHHHTGGGGSCGGGEEEEECCEEECEE-TTSCBCE--EETTEECEEECCGGGHHHHHHH
T ss_pred CCccceEEEEecCCCHHHHHHHHHhhhhcCCCcCceEEEEecceEEEc-CCCcccc--cCCcccccCCCCchHHHHHHHH
Confidence 445899999999999999999999999999999999999999999997 5899999 7788999999999999999999
Q ss_pred cChHHHHHHcCceEEEEEeCCCccccccchHHHHHHhhcCCceeeeeccC-CccCccceEEEEecCCCceeEEEEeccCc
Q 006923 275 SGLLKEWHDAGLKWVLFFQDTNGLLFKAIPASLGVSATKQYHVNSLAVPR-KAKEAIGGITRLTHADGRSMVINVEYNQL 353 (625)
Q Consensus 275 sGlL~~l~~~G~~yi~v~~vDN~L~~~~DP~~lG~~~~~~~~~~~kvv~r-~~~E~vG~i~~~~~~dG~~~v~nVEYsel 353 (625)
+|+|++|+++|++|++|+|+||+|++++||.|+||++.++++++++|++| .+.+++|++|.. ||+.++ |||+|+
T Consensus 233 sg~L~~l~~~g~e~~~V~n~Dn~L~~~~d~~~lg~~~~~~~~~~~~v~~k~~~~e~~Gvl~~~---dg~~~v--vEy~E~ 307 (505)
T 1jv1_A 233 QNIVEDMEQRGIWSIHVYCVDNILVKVADPRFIGFCIQKGADCGAKVVEKTNPTEPVGVVCRV---DGVYQV--VEYSEI 307 (505)
T ss_dssp TTHHHHHHHTTCCEEEEEETTBTTCCTTCHHHHHHHHHTTCSEEEEEEECCSTTCSCCEEEEE---TTEEEE--ECGGGS
T ss_pred cCcHHHHHhcCCCEEEEEECCccccccchHHHHHHHHHcCCCEEEEEEEccCCccCcceEEEE---CCeEEE--EEEeeC
Confidence 99999999999999999999999999999999999999999999999985 688999999975 898766 999999
Q ss_pred cHHHHhcCCCCCCCCCCCCCCCCccceeeEEEehhhhHHHHhhccCccccccCCc---ccCCCCCcc----cCchhHhHh
Q 006923 354 DPLLRATGFPDGDVNCETGYSPFPGNINQLILELGPYMEELKKTGGAIKEFVNPK---YKDASKTSF----KSSTRLECM 426 (625)
Q Consensus 354 ~~~l~~~~~~~g~l~~~~gf~~f~gNinn~~~~l~~l~~~l~~~~~~lp~~vnpK---~~d~~~~~~----~~~~rLE~~ 426 (625)
+++.+...+++|.+. +.++|||||||++++++++.+...+.||.|+|+| |.|.++... ++.+|||||
T Consensus 308 p~~~~~~~~~~g~~~------~~~~N~~~~~f~l~~L~~i~~~~~~~l~~hv~~Kkip~~d~~g~~v~P~~pn~~klE~~ 381 (505)
T 1jv1_A 308 SLATAQKRSSDGRLL------FNAGNIANHFFTVPFLRDVVNVYEPQLQHHVAQKKIPYVDTQGQLIKPDKPNGIKMEKF 381 (505)
T ss_dssp CHHHHHCBCTTSSBS------SCEEEEEEEEEEHHHHHHHHHTTGGGCCCEEEEECCCEECTTSCEECCSSCCEEEEECC
T ss_pred CHHHhhhcccccccc------cceeeEEEEEecHHHHHHHHHhhcccCCceecccccccccCCCCCcCCCCCCceeHHHH
Confidence 999888777666543 4477999999999999998877667899999998 667543222 234699999
Q ss_pred hccccccCCCCCceeEEEeeccceeecccCCCcccccCCCCCCCCChhhHHHHHHHHHHHHHHHcCCcc-cCCcc-----
Q 006923 427 MQDYPKTLPPSAKVGFTVMDTWLAYAPVKNNPEDAAKVPKGNPYHSATSGEMAIYCANSLILRKAGAQV-DDPVQ----- 500 (625)
Q Consensus 427 m~D~~~~f~~~~~~g~~~v~R~~~FsPvKN~~~~~~~~~~g~~~dsp~t~~~dl~~~~~~~L~~~G~~v-~~~~~----- 500 (625)
|||++.+| .++++++|+|++||+||||+++.+ | .|||+|||+|||++|++||++||+.+ ++...
T Consensus 382 i~d~~~~~---~~~~~~~V~R~~~FsPvKn~~~~~-----~--~dsp~ta~~~l~~~~~~~l~~ag~~~~~~~~~~~~~~ 451 (505)
T 1jv1_A 382 VFDIFQFA---KKFVVYEVLREDEFSPLKNADSQN-----G--KDNPTTARHALMSLHHCWVLNAGGHFIDENGSRLPAI 451 (505)
T ss_dssp GGGGGGGC---SSEEEEEECHHHHCCBCCSCTTSS-----S--SSSHHHHHHHHHHHHHHHHHHTTCEEBCTTCCBCCSS
T ss_pred HHHHHhhc---CceEEEEECcccceeeccCCCCCC-----C--CCCHHHHHHHHHHHHHHHHHHCCCeeccccccccccc
Confidence 99998776 367889999988999999999863 1 69999999999999999999999998 33200
Q ss_pred -----cccCCeeecCCCeEEEcCCCCCCHHHH-hhhc
Q 006923 501 -----EVFNGQEVEVWPRLTWKPKWGLTFSEI-KNKV 531 (625)
Q Consensus 501 -----~~~~g~~~~~~P~i~l~p~~~~~~~~~-~~k~ 531 (625)
.......++++|.|+|. |+.++++ +.|.
T Consensus 452 ~~~~~~~~~~~~~Eisp~~sy~---ge~l~~~~~~~~ 485 (505)
T 1jv1_A 452 PRLKDANDVPIQCEISPLISYA---GEGLESYVADKE 485 (505)
T ss_dssp CCCCSTTCCCCCEEECTTTCSS---SCSCHHHHTTCE
T ss_pred ccccccccCCCeEEECCccccC---CCCchHHhcCCc
Confidence 00011247888999998 8888877 4443
No 6
>2oeg_A UTP-glucose-1-phosphate uridylyltransferase 2, putative; rossmann-fold, beta-helix, pyrophosphorylase; HET: UPG; 2.30A {Leishmania major} PDB: 2oef_A*
Probab=100.00 E-value=1.1e-88 Score=751.07 Aligned_cols=440 Identities=18% Similarity=0.205 Sum_probs=371.7
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCCCCCCCCcccccCCCchhhHHHHHHHHhhcceEEEEEcCCccccCCccCCcccCCC
Q 006923 86 LKSYIKTARELLADSKAGKNPFDGFTPSVPTGEVLKFGDDTFINYEQAGVKEAKNAAFVLVAGGLGERLGYNGIKVALPA 165 (625)
Q Consensus 86 l~~y~~~~~~~l~~s~~~~~~~~~~~p~vP~~~~l~~~~~~~~~~~~~G~~~l~kvavvlLaGGlGTRLG~~~pK~~lpv 165 (625)
+..|...++++++.+. +..+|+.+.|+ +...++.+... ..|+++|+++|||+||||+|||||+++||+++|+
T Consensus 29 ~~~f~~~~~~~~~~~~-~~i~~~~i~p~---~~~~~~~~~~~----~~g~~~l~k~avViLAGGlGTRLg~~~PK~llpV 100 (505)
T 2oeg_A 29 IRTFIAQHVMVSKGET-GSIPDSAIMPV---DSLDALDSLTI----ECDNAVLQSTVVLKLNGGLGTGMGLCDAKTLLEV 100 (505)
T ss_dssp HHHHHHHHHHHHTTCC-CCCCGGGCBCC---CCCCBGGGCCC----CCCHHHHHTEEEEEEECCCCGGGTCCSCGGGSEE
T ss_pred HHHHHHHHHHHHhcCC-CCcChhhcCCh---hhccChhhcch----hHHHHHHhcceEEEEcCCcccccCCCCCCccccc
Confidence 4566777777775532 46678888773 44455543221 3799999999999999999999999999999999
Q ss_pred cCCCCcchHHHHHHHHHHHHHHhhhhccCCcccccEEEecCccchHHHHHHHH-hCCCCCCCCCcEEEEEecceeEEecC
Q 006923 166 ETTTGTCFLQNYIECILALQESSCRLAEGKCQEIPFAIMTSDDTHSRTQELLE-SNSYFGMKPTQVKLLKQEKVACLDDN 244 (625)
Q Consensus 166 ~~~~~~s~lql~~~~i~~l~~~~~~~~~g~~~~iPl~IMTS~~T~~~T~~~l~-~~~~FGl~~~~V~~F~Q~~~P~l~~~ 244 (625)
+ +++||||+++++|++++.+|+ +.|||+||||+.||+.|++||+ +|++||+++++|++|+|+++||++.+
T Consensus 101 ~--~gk~fLe~~ie~l~~~~~~~g-------~~ip~viMtS~~t~e~t~~~f~~~~~~fGl~~~~I~~f~Q~~~P~~~~~ 171 (505)
T 2oeg_A 101 K--DGKTFLDFTALQVQYLRQHCS-------EHLRFMLMDSFNTSASTKSFLKARYPWLYQVFDSEVELMQNQVPKILQD 171 (505)
T ss_dssp E--TTEEHHHHHHHHHHHHHHHTC-------TTCEEEEEECHHHHHHHHHHHHHHCHHHHTTCCCCCEEECCCEECEETT
T ss_pred C--CCCcHHHHHHHHHHHHHHhcC-------CCcCEEEEeCCCCHHHHHHHHhhhhhccCCCccceEEEEEcCEEeEecC
Confidence 6 899999999999999999986 4899999999999999999999 99999999999999999999999876
Q ss_pred CCceecCCCCCCccccccCCCchhhHHHhhcChHHHHHHcCceEEEEEeCCCccccccchHHHHHHhhcCCceeeeeccC
Q 006923 245 DARLAMDPKNKYRIQTKPHGHGDVHALLYSSGLLKEWHDAGLKWVLFFQDTNGLLFKAIPASLGVSATKQYHVNSLAVPR 324 (625)
Q Consensus 245 ~g~~~l~~~~~~~i~~~P~GhGdi~~aL~~sGlL~~l~~~G~~yi~v~~vDN~L~~~~DP~~lG~~~~~~~~~~~kvv~r 324 (625)
+++++.. +++..++|+|+||||+|.+|++||+|++|+++|++|++|+|+|| |++.+||.||||+++++++++++|++|
T Consensus 172 ~~~~i~~-~~~~~~e~~P~G~Gg~~~aL~~sGlL~~l~~~G~e~i~V~N~DN-L~~~~D~~llg~~~~~~ad~~~~v~~k 249 (505)
T 2oeg_A 172 TLEPAAW-AENPAYEWAPPGHGDIYTALYGSGKLQELVEQGYRYMFVSNGDN-LGATIDKRVLAYMEKEKIDFLMEVCRR 249 (505)
T ss_dssp TCCBCCC-TTCGGGGEECCCTTHHHHHHHHTTHHHHHHHTTCCEEEEECTTC-TTCCCCHHHHHHHHHHTCSEEEEEEEC
T ss_pred CCceeec-CCCCccccCcCCchHHHHHHHhcChHHHHHhcCCCEEEEEECCc-cccccCHHHHHHHHhcCCcEEEEEEEe
Confidence 6687733 34446999999999999999999999999999999999999999 899999999999999999999999999
Q ss_pred CccC-ccceEEEEec-----CCCc-------eeEEEEeccCccHHHHhcCCCCCCCCCCCCCCCCc-cceeeEEEehhhh
Q 006923 325 KAKE-AIGGITRLTH-----ADGR-------SMVINVEYNQLDPLLRATGFPDGDVNCETGYSPFP-GNINQLILELGPY 390 (625)
Q Consensus 325 ~~~E-~vG~i~~~~~-----~dG~-------~~v~nVEYsel~~~l~~~~~~~g~l~~~~gf~~f~-gNinn~~~~l~~l 390 (625)
+..+ +.|+++. ++ .||+ +.+ +||+|+++.. ..+++|.+.|+ ||||||||+|++|
T Consensus 250 ~~~d~~~Gvl~~-~~~~~~~~dg~~nvEyn~~~l--lEyse~p~e~---------~~~~~g~~~f~~~Ninn~~~~l~~l 317 (505)
T 2oeg_A 250 TESDKKGGHLAR-QTVYVKGKDGQPDAEKRVLLL--RESAQCPKAD---------MESFQDINKYSFFNTNNLWIRLPVL 317 (505)
T ss_dssp CTTCCSSEEEEE-EEEEECCSSSCCCEEEEEEEE--EEGGGSCGGG---------HHHHHCTTTTCEEEEEEEEEEHHHH
T ss_pred cCCccceeEEEE-ecccccccCCccccccCceeE--EEeccCChhh---------hhcccCccccCeeEEEEEEEEHHHH
Confidence 8765 5555554 34 6898 444 6666665543 33345555666 7999999999999
Q ss_pred HHHHhhcc--CccccccCCcccCCCCCcccCchhHhHhhccccccCCCCCceeEEEeeccceeecccCCCcccccCCCCC
Q 006923 391 MEELKKTG--GAIKEFVNPKYKDASKTSFKSSTRLECMMQDYPKTLPPSAKVGFTVMDTWLAYAPVKNNPEDAAKVPKGN 468 (625)
Q Consensus 391 ~~~l~~~~--~~lp~~vnpK~~d~~~~~~~~~~rLE~~m~D~~~~f~~~~~~g~~~v~R~~~FsPvKN~~~~~~~~~~g~ 468 (625)
+++++.+. ..||+|+|+|+.|..++..++++||||||||++++|++ +++++|+|+ ||+||||+++
T Consensus 318 ~~~~~~~~~~~~Lp~~vn~K~i~~~d~~~~~~~qlE~~~~d~~~~~~~---~~~~~V~R~-~FsPvKn~~d--------- 384 (505)
T 2oeg_A 318 LETMQEHGGTLPLPVIRNEKTVDSSNSASPKVYQLETAMGAAIAMFES---ASAIVVPRS-RFAPVKTCAD--------- 384 (505)
T ss_dssp HHHHHHTTSSCCCCCEEEEEESSSSCTTSCEEEEEECCGGGGGGSCTT---CEEEECCGG-GCCCCSSHHH---------
T ss_pred HHHHhhhcCccCCcceecccccCCCCCCCCCeEEEeEHHHHHHHhcCc---ceEEEeccc-eeecccCCCC---------
Confidence 99998753 35789999999887666677899999999999999854 588899997 9999999644
Q ss_pred CCCChhhHHHHHHHHHH--HHHHHcCCcccCCcccccCCeeecCCCeEEEcCCCCCCHHHHhhhcCC-CCccCCCceEEE
Q 006923 469 PYHSATSGEMAIYCANS--LILRKAGAQVDDPVQEVFNGQEVEVWPRLTWKPKWGLTFSEIKNKVSG-SCSVSQKSTMVI 545 (625)
Q Consensus 469 ~~dsp~t~~~dl~~~~~--~~L~~~G~~v~~~~~~~~~g~~~~~~P~i~l~p~~~~~~~~~~~k~~~-~~~i~~~s~L~v 545 (625)
+.++|+|+|.+++ +|+. +|+++ ..+|.|.|+|.|++++++|++||++ +|+|+++|+|+|
T Consensus 385 ----l~~~~sdly~~~~~~~~~~-~~~~~-------------~~~p~i~l~p~~~~~~~~~~~r~~~g~psi~~~~~L~v 446 (505)
T 2oeg_A 385 ----LLALRSDAYVVTDDFRLVL-DDRCH-------------GHPPVVDLDSAHYKMMNGFEKLVQHGVPSLVECKRVTV 446 (505)
T ss_dssp ----HHHHHSTTEEECTTCCEEE-CGGGT-------------TCCCEEEECHHHHSSHHHHHHHSTTCCCBCTTEEEEEE
T ss_pred ----HHHHHHHHHhhcCCceEEE-ccccc-------------CcCCeEEEChhHcCcHHHHHHhcCCCCCccccCcEEEE
Confidence 5699999999887 5655 44432 2479999999999999999999998 699999999999
Q ss_pred EeceEEecCeEEEeEEEEEcC-CCCeeEeC-C-eeEccceeEeeC
Q 006923 546 KGRNVVLEDLSLNGALIIDSV-DDAEVRVG-G-KVQNKGWTLEPV 587 (625)
Q Consensus 546 ~G~~~~~~~v~l~G~liI~a~-~g~~~~i~-~-~v~N~g~~~~~~ 587 (625)
+|+++||+||+|+|+|+|.|+ +|++++|+ + +|+|+||.....
T Consensus 447 ~G~~~f~~~v~l~G~v~i~a~~~~~~~~ip~g~~l~n~~~~~~~~ 491 (505)
T 2oeg_A 447 KGLVQFGAGNVLTGTVTIENTDSASAFVIPDGAKLNDTTASPQQS 491 (505)
T ss_dssp ESSEECCTTCEEEEEEEEECCSCSSCEECCTTCEEESCEECC---
T ss_pred EcceEEccCcEEEEEEEEEecCCCCcEEeCCCCEEeCceechhhh
Confidence 999999999999999999999 99999995 5 999999986654
No 7
>3oc9_A UDP-N-acetylglucosamine pyrophosphorylase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.80A {Entamoeba histolytica}
Probab=100.00 E-value=1.1e-82 Score=684.62 Aligned_cols=368 Identities=21% Similarity=0.274 Sum_probs=326.3
Q ss_pred hhHHHHHHHHhhc--ceEEEEEcCCccccCCccCCcccCCCcCCCCcchHHHHHHHHHHHHHHhhhhccCCcccccEEEe
Q 006923 127 FINYEQAGVKEAK--NAAFVLVAGGLGERLGYNGIKVALPAETTTGTCFLQNYIECILALQESSCRLAEGKCQEIPFAIM 204 (625)
Q Consensus 127 ~~~~~~~G~~~l~--kvavvlLaGGlGTRLG~~~pK~~lpv~~~~~~s~lql~~~~i~~l~~~~~~~~~g~~~~iPl~IM 204 (625)
.++|++.|+++|+ |+|||+||||||||||+++||+++|+++++++||||+++++|+++|+++.+..+|..+.||||||
T Consensus 20 ~~~~~~~Gl~~i~~gkvavvlLAGG~GTRLG~~~PK~~~~Vgl~~gks~lq~~~e~i~~lq~l~~~~~~~~~~~Ip~~IM 99 (405)
T 3oc9_A 20 TKEHYYRGLELISQGKTALITPAGGQGSRLGFEHPKGMFVLPFEIPKSIFQMTSERLLRLQELASEYSHQKNVMIHWFLM 99 (405)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEECCSBCTTTTCCSBGGGCEECSSSCEEHHHHHHHHHHHHHHHHHHHHCCSCCCCEEEEE
T ss_pred cHHHHHHHHHHHhcCceEEEEecCCCcccccCCCCCccccccCCCCCcHHHHHHHHHHHHHHHHhhhccccCCCCCEEEE
Confidence 3689999999996 99999999999999999999999999999999999999999999999876432344468999999
Q ss_pred cCccchHHHHHHHHhCCCCCCCCCcEEEEEecceeEEecCCCceecCCCCCCccccccCCCchhhHHHhhcChHHHHHHc
Q 006923 205 TSDDTHSRTQELLESNSYFGMKPTQVKLLKQEKVACLDDNDARLAMDPKNKYRIQTKPHGHGDVHALLYSSGLLKEWHDA 284 (625)
Q Consensus 205 TS~~T~~~T~~~l~~~~~FGl~~~~V~~F~Q~~~P~l~~~~g~~~l~~~~~~~i~~~P~GhGdi~~aL~~sGlL~~l~~~ 284 (625)
||+.||+.|++||++|+|||++++||++|+|+++||+ +.+|++++ +++++++|+|+||||+|.+|+++|+|++|+++
T Consensus 100 tS~~t~e~t~~~f~~~~~fGl~~~~i~~f~Q~~~P~i-~~dg~i~l--~~~~~i~~~P~GhGgi~~aL~~sG~Ld~l~~~ 176 (405)
T 3oc9_A 100 TNEETIEEINNYFKEHQYFGLSSEQIHCFPQGMLPVV-DFNGKILY--EKKDKPYMAPNGHGGLFKALKDNGILEFMNEK 176 (405)
T ss_dssp ECTTTHHHHHHHHHHTGGGGSCTTSEEEEECCEEECB-CTTSCBCE--EETTEECEEECCGGGHHHHHHHTTHHHHHHHH
T ss_pred eCCccHHHHHHHHHhCcccCCCccceEEEeeCceeEE-ecCCCeec--CCCCccccccCCChHHHHHHHHCCcHHHHHhc
Confidence 9999999999999999999999999999999999999 57999999 67889999999999999999999999999999
Q ss_pred CceEEEEEeCCCccccccchHHHHHHhhcCCceeeeeccCC-ccCccceEEEEecCCCceeEEEEeccCccHHHHhcCCC
Q 006923 285 GLKWVLFFQDTNGLLFKAIPASLGVSATKQYHVNSLAVPRK-AKEAIGGITRLTHADGRSMVINVEYNQLDPLLRATGFP 363 (625)
Q Consensus 285 G~~yi~v~~vDN~L~~~~DP~~lG~~~~~~~~~~~kvv~r~-~~E~vG~i~~~~~~dG~~~v~nVEYsel~~~l~~~~~~ 363 (625)
|++|+||+|+||+|++++||.|||||++++++|+++||+|+ |.|++|++|++ ||+++| |||+|++++ +..+++
T Consensus 177 Gieyi~v~nvDN~L~~~~Dp~~lg~~~~~~~d~~~kvv~k~~~dek~Gvl~~~---dg~~~v--vEysei~~e-~e~~~~ 250 (405)
T 3oc9_A 177 GIKYSVAHNVDNILCKDVDPNMIGYMDLLQSEICIKIVKKGFKEEKVGVLVKE---QERIKV--VEYTELTDE-LNKQLS 250 (405)
T ss_dssp TCCEEEEECTTBTTCCSSCHHHHHHHHHTTCSEEEEEEECCSTTCSCCEEEEE---TTEEEE--ECGGGCCTT-TTCBCT
T ss_pred CCEEEEEEeCCCcccccCCHHHHHHHHHcCCCEEEEEEECCCCCCccceEEEE---CCeeEE--EEEeeCCHH-HhhcCC
Confidence 99999999999999999999999999999999999999986 67999999986 999877 999999998 777777
Q ss_pred CCCCCCCCCCCCCccceeeEEEehhhhHHHHhhccCccccccCCc---ccCCCCCc----ccCchhHhHhhccccccCCC
Q 006923 364 DGDVNCETGYSPFPGNINQLILELGPYMEELKKTGGAIKEFVNPK---YKDASKTS----FKSSTRLECMMQDYPKTLPP 436 (625)
Q Consensus 364 ~g~l~~~~gf~~f~gNinn~~~~l~~l~~~l~~~~~~lp~~vnpK---~~d~~~~~----~~~~~rLE~~m~D~~~~f~~ 436 (625)
+|++. +..+||+||+|++++|++++ ...||.|++.| |.|.++.. ..+.+|||+||||+++++
T Consensus 251 ~g~l~------fn~~Ni~~h~fs~~fL~~i~---~~~l~~h~a~Kkip~~d~~g~~~~p~~~ngiklE~fifd~f~~~-- 319 (405)
T 3oc9_A 251 NGEFI------YNCGHISINGYSTSFLEKAA---EYQLPYHIAKKKVPFVNEQGIVIHPSENNGIKKEIFFFDVFPLA-- 319 (405)
T ss_dssp TSCBS------SCEEEEEEEEEEHHHHHHHT---TCCCCCEEEEECCCEECTTSCEECCSSCCEEEEECCGGGGGGGC--
T ss_pred CCcee------eccceeEeeecCHHHHHHhh---hccCCcEEeccccCccCCCCCCcccCCcceeehHHHHHHHHHhc--
Confidence 66654 33789999999999999988 34689999877 44544322 224689999999997775
Q ss_pred CCceeEEEeeccceeecccCCCcccccCCCCCCCCChhhHHHHHHHHHHHHHHHcCCcccCCcccccCCeeecCCCeEEE
Q 006923 437 SAKVGFTVMDTWLAYAPVKNNPEDAAKVPKGNPYHSATSGEMAIYCANSLILRKAGAQVDDPVQEVFNGQEVEVWPRLTW 516 (625)
Q Consensus 437 ~~~~g~~~v~R~~~FsPvKN~~~~~~~~~~g~~~dsp~t~~~dl~~~~~~~L~~~G~~v~~~~~~~~~g~~~~~~P~i~l 516 (625)
.++.+++|+|++||+||||+++.+ .|||+|||+|++++|++||+++|+.+.+... ..+|++|+|+|
T Consensus 320 -~~~~~~eV~R~~eF~PlKn~~g~~--------~dsp~tar~~l~~~~~~wl~~ag~~~~~~~~-----~~~Eispl~sy 385 (405)
T 3oc9_A 320 -TKVSIFEIQRFIEFSALKNSLNES--------FDNVNTVKRDWYRLNIYYLKKAGAIVDDSKS-----PICEISFRKSF 385 (405)
T ss_dssp -SCEEEEECCHHHHCCBCCCCTTSS--------SSSHHHHHHHHHHHHHHHHHHTTCEEECSSC-----CCEEECTTTCS
T ss_pred -cceEEEEEChHhcccceecCCCCC--------CCCHHHHHHHHHHHHHHHHHHCCCEEcCCCC-----ccEEeCccccc
Confidence 567889999999999999999864 7999999999999999999999999864321 35788999999
Q ss_pred cCCCCCCHHHHhhhc
Q 006923 517 KPKWGLTFSEIKNKV 531 (625)
Q Consensus 517 ~p~~~~~~~~~~~k~ 531 (625)
+ |+.++.++.|.
T Consensus 386 ~---ge~l~~~~~~~ 397 (405)
T 3oc9_A 386 E---EEGLKEFKGKT 397 (405)
T ss_dssp S---SGGGGGGTTCE
T ss_pred C---ccCccccCCcE
Confidence 9 88888766554
No 8
>2icy_A Probable UTP-glucose-1-phosphate uridylyltransferase 2; AT3G03250, UDP, putative UDP-glucose pyrophosphorylase; HET: UPG U5P; 1.64A {Arabidopsis thaliana} SCOP: b.81.1.4 c.68.1.5 PDB: 2icx_A* 1z90_A 2q4j_A
Probab=100.00 E-value=5.3e-80 Score=678.60 Aligned_cols=453 Identities=16% Similarity=0.177 Sum_probs=372.6
Q ss_pred HHHHHHHHHhhcCCCCCccHHHHHHHHHHHHhhccCCCCCCCCCCCCCCCcccccCCCchh-hHHHHHHHHhhcceEEEE
Q 006923 67 EKRAFFDQVAKLNSSYPGGLKSYIKTARELLADSKAGKNPFDGFTPSVPTGEVLKFGDDTF-INYEQAGVKEAKNAAFVL 145 (625)
Q Consensus 67 ek~~Ll~qL~~id~~~~~~l~~y~~~~~~~l~~s~~~~~~~~~~~p~vP~~~~l~~~~~~~-~~~~~~G~~~l~kvavvl 145 (625)
+..+|+..+..-+....-.+..|.+.++++++.+ ...++|+.+.| +|++...++.+... .++++.|+++++|+|+|+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~-~~~~~~~~i~p-~~~~~~~~~~~~~~~~~~~~~g~~~l~k~~vvi 84 (469)
T 2icy_A 7 NLPQLKSAVDGLTEMSESEKSGFISLVSRYLSGE-AQHIEWSKIQT-PTDEIVVPYEKMTPVSQDVAETKNLLDKLVVLK 84 (469)
T ss_dssp CHHHHHHHHHHCTTSCHHHHHHHHHHHHHHC-------CCGGGCBC-CCTTTEEEGGGSCCCCSCHHHHHHHHTTEEEEE
T ss_pred HHHHHHhhcCchhccchhhHHHHHHHHHHHHhcc-CCCCccccccc-CCcccccChhhcccchhhHHHHHHhhccceEEE
Confidence 3455555554333322223456666777766543 23568888887 68887777765432 456778999999999999
Q ss_pred EcCCccccCCccCCcccCCCcCCCCcchHHHHHHHHHHHHHHhhhhccCCcccccEEEecCccchHHHHHHHHhCCCCCC
Q 006923 146 VAGGLGERLGYNGIKVALPAETTTGTCFLQNYIECILALQESSCRLAEGKCQEIPFAIMTSDDTHSRTQELLESNSYFGM 225 (625)
Q Consensus 146 LaGGlGTRLG~~~pK~~lpv~~~~~~s~lql~~~~i~~l~~~~~~~~~g~~~~iPl~IMTS~~T~~~T~~~l~~~~~FGl 225 (625)
||||+|||||+++||+++|+ .+++||||+++++|++++.+|+ +.|||+||||+.||+.|++||++|++||+
T Consensus 85 LAGGlGTRLg~~~PK~llpv--~~gkp~Le~~i~~l~~~~~~~G-------~~ip~vimts~~t~e~t~~~f~~~~~fG~ 155 (469)
T 2icy_A 85 LNGGLGTTMGCTGPKSVIEV--RDGLTFLDLIVIQIENLNNKYG-------CKVPLVLMNSFNTHDDTHKIVEKYTNSNV 155 (469)
T ss_dssp EECCBSGGGTCCSBGGGSEE--ETTEEHHHHHHHHHHHHHHHHS-------CCCCEEEEECTTTHHHHHHHHGGGTTSSS
T ss_pred EcCCccccCCCCCCcccccc--CCCCCHHHHHHHHHHHHHHhcC-------CCccEEEEeCCCCHHHHHHHHHhcccCCc
Confidence 99999999999999999999 5799999999999999998886 47999999999999999999999999998
Q ss_pred CCCcEEEEEecceeEEecCCCceecC-CCCCCccccccCCCchhhHHHhhcChHHHHHHcCceEEEEEeCCCccccccch
Q 006923 226 KPTQVKLLKQEKVACLDDNDARLAMD-PKNKYRIQTKPHGHGDVHALLYSSGLLKEWHDAGLKWVLFFQDTNGLLFKAIP 304 (625)
Q Consensus 226 ~~~~V~~F~Q~~~P~l~~~~g~~~l~-~~~~~~i~~~P~GhGdi~~aL~~sGlL~~l~~~G~~yi~v~~vDN~L~~~~DP 304 (625)
+|++|+|+++||++. +++++++ +.+++.++|+|+||||+|.+|+++|+|++|+++|++|++|+|+|| |++.+||
T Consensus 156 ---~I~~f~Q~~~P~i~~-e~~~~l~~~~~~~~~e~~P~GtGG~~~~L~~sGll~~l~~~G~e~~~V~n~Dn-L~~~~d~ 230 (469)
T 2icy_A 156 ---DIHTFNQSKYPRVVA-DEFVPWPSKGKTDKEGWYPPGHGDVFPALMNSGKLDTFLSQGKEYVFVANSDN-LGAIVDL 230 (469)
T ss_dssp ---CEEEEECCCEECEET-TTTEEGGGGTCCSGGGEECCCGGGHHHHHHHHSHHHHHHTTTCCEEEEEETTB-TTCCCCH
T ss_pred ---eEEEEEecceeeEcc-ccCccccCCCCCccccCCcCCchHHHHHHHhcCcHHHHHhcCCCEEEEEECCc-CCcccCH
Confidence 799999999999975 7888883 334478999999999999999999999999999999999999999 8999999
Q ss_pred HHHHHHhhcCCceeeeeccCC-ccCccceEEEEecCCCceeEEEEeccCccHHHHhcCCCCCCCCCCCCCCCCccceeeE
Q 006923 305 ASLGVSATKQYHVNSLAVPRK-AKEAIGGITRLTHADGRSMVINVEYNQLDPLLRATGFPDGDVNCETGYSPFPGNINQL 383 (625)
Q Consensus 305 ~~lG~~~~~~~~~~~kvv~r~-~~E~vG~i~~~~~~dG~~~v~nVEYsel~~~l~~~~~~~g~l~~~~gf~~f~gNinn~ 383 (625)
.|+||+.+++++++++|++|+ |.++.|++|.. ||+..+ +||+|++....... .+...|++| |||||
T Consensus 231 ~ll~~~~~~~a~~t~~v~~k~~~~~~~Gvl~~~---dg~~~v--vE~~e~p~~~~~e~------k~~~~~~~~--N~g~y 297 (469)
T 2icy_A 231 TILKHLIQNKNEYCMEVTPKTLADVKGGTLISY---EGKVQL--LEIAQVPDEHVNEF------KSIEKFKIF--NTNNL 297 (469)
T ss_dssp HHHHHHHHHTCSEEEEEEECCTTCCSSCEEEEE---TTEEEE--ECGGGSCGGGHHHH------HSSSSCCEE--EEEEE
T ss_pred HHHHHHHHcCCCeeEEEEEeccCCCceeEEEEE---CCEEEE--EEEeccChhhhhhh------cccccccee--eEEEE
Confidence 999999999999999999986 56889999864 888766 99999987543210 011346655 99999
Q ss_pred EEehhhhHHHHhhccCccccccCCcccCCCCCcccCchhHhHhhccccccCCCCCceeEEEeeccceeecccCCCccccc
Q 006923 384 ILELGPYMEELKKTGGAIKEFVNPKYKDASKTSFKSSTRLECMMQDYPKTLPPSAKVGFTVMDTWLAYAPVKNNPEDAAK 463 (625)
Q Consensus 384 ~~~l~~l~~~l~~~~~~lp~~vnpK~~d~~~~~~~~~~rLE~~m~D~~~~f~~~~~~g~~~v~R~~~FsPvKN~~~~~~~ 463 (625)
||++++|+++++.....||.|+|||+.|+ .+++|||+||||++.+|++ +..++|+|+ ||+||||+++..
T Consensus 298 ~~~~~~L~~i~~~~~~~lp~~v~~K~id~-----~~~~klE~~~~D~~~~~~~---~~~~~V~R~-~F~PvKn~~dll-- 366 (469)
T 2icy_A 298 WVNLKAIKKLVEADALKMEIIPNPKEVDG-----VKVLQLETAAGAAIRFFDN---AIGVNVPRS-RFLPVKASSDLL-- 366 (469)
T ss_dssp EEEHHHHHHHHHTTCCCCCCBCCEEEETT-----EEEECCBCCGGGGGGGSTT---CEEEECCGG-GCCBCCSHHHHH--
T ss_pred EEcHHHHHHHHhcccCCchhhccceecCC-----CceEeehHhhHHHHHhcCC---eEEEEechh-HcCcCCCHHHHH--
Confidence 99999999999877788999999999972 3689999999999988853 244589995 899999976542
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHHcCCcccCCcccccCCeeecCCCeEEEcCCCCCCHHHHhhhcCCCCccCCCceE
Q 006923 464 VPKGNPYHSATSGEMAIYCANSLILRKAGAQVDDPVQEVFNGQEVEVWPRLTWKPKWGLTFSEIKNKVSGSCSVSQKSTM 543 (625)
Q Consensus 464 ~~~g~~~dsp~t~~~dl~~~~~~~L~~~G~~v~~~~~~~~~g~~~~~~P~i~l~p~~~~~~~~~~~k~~~~~~i~~~s~L 543 (625)
++++|+ |...+|..+.++. +.++.+|.|+|+|+ ++++++|.+||+++|+|.++|||
T Consensus 367 -----------~~~s~l------~~~~~g~~~~~~~------~~~~~~P~v~l~~~-~~~v~~f~~rf~~~p~~~~~~~l 422 (469)
T 2icy_A 367 -----------LVQSDL------YTLVDGFVTRNKA------RTNPSNPSIELGPE-FKKVATFLSRFKSIPSIVELDSL 422 (469)
T ss_dssp -----------HHHSTT------EEEETTEEEECTT------CCSSSCCEEEECGG-GCSHHHHHHTBSSCCBCTTEEEE
T ss_pred -----------HHHHHH------HHHhcCcEEecCc------ccCCCCCeEEcChh-hhhHHHHHHhcCCCcccccCCeE
Confidence 344443 4444455443322 24788999999999 57999999999999999999999
Q ss_pred EEEeceEEecCeEEEeEEEEEcCCCCeeEeCC--eeEcccee
Q 006923 544 VIKGRNVVLEDLSLNGALIIDSVDDAEVRVGG--KVQNKGWT 583 (625)
Q Consensus 544 ~v~G~~~~~~~v~l~G~liI~a~~g~~~~i~~--~v~N~g~~ 583 (625)
+|+|||+||+||+|+|+|+|.|++|.+++||+ +++|+.+.
T Consensus 423 ~v~gdv~fg~~v~l~G~v~i~~~~~~~~~ip~g~~l~~~~~~ 464 (469)
T 2icy_A 423 KVSGDVWFGSSIVLKGKVTVAAKSGVKLEIPDRAVVENKNIN 464 (469)
T ss_dssp EEESEEEECSSCEEEEEEEEECCTTCEEEECTTCEEESCEEC
T ss_pred EEEeeeEEcCCcEEEEEEEEEcCCCCeeecCCCCEeecceee
Confidence 99999999999999999999999999999986 99999764
No 9
>2i5k_A UTP--glucose-1-phosphate uridylyltransferase; LEFT-handed beta-helix, SGC domain; 3.10A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7e-79 Score=673.08 Aligned_cols=456 Identities=18% Similarity=0.188 Sum_probs=371.9
Q ss_pred cccccccCCCCHHHHHHHHHHHhhcCCCCCccHHHHHHHHHHHHhh-ccCCCCCCCCCCCCCCCcccccCCCchhhHHHH
Q 006923 54 LFEKWAAPGVDDNEKRAFFDQVAKLNSSYPGGLKSYIKTARELLAD-SKAGKNPFDGFTPSVPTGEVLKFGDDTFINYEQ 132 (625)
Q Consensus 54 L~~~~~~~~~~~~ek~~Ll~qL~~id~~~~~~l~~y~~~~~~~l~~-s~~~~~~~~~~~p~vP~~~~l~~~~~~~~~~~~ 132 (625)
|-+.|+....++++|++|.+||..++ +.++++++. ++.+..+|+.+.| +|++...++.+... ++
T Consensus 20 l~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~i~p-~~~~~~~~~~~~~~--~~- 84 (488)
T 2i5k_A 20 LNKLADSSKLDDAARAKFENELDSFF-----------TLFRRYLVEKSSRTTLEWDKIKS-PNPDEVVKYEIISQ--QP- 84 (488)
T ss_dssp TTCCC--------CCSCTHHHHHHHH-----------HHHHHHHHHHHSCCSCCGGGEEC-CCTTTEEEHHHHHS--SC-
T ss_pred HHHHHhhcCCCHHHHHHHHHHHHHHH-----------HHHHHHHhcccccCCCccccccc-CChhcccChhhccc--ch-
Confidence 55566664322678888999998654 233444543 3346788998887 57777766643211 11
Q ss_pred HHHHhhcceEEEEEcCCccccCCccCCcccCCCcCCCCcchHHHHHHHHHHHHHHhhhhccCCcccccEEEecCccchHH
Q 006923 133 AGVKEAKNAAFVLVAGGLGERLGYNGIKVALPAETTTGTCFLQNYIECILALQESSCRLAEGKCQEIPFAIMTSDDTHSR 212 (625)
Q Consensus 133 ~G~~~l~kvavvlLaGGlGTRLG~~~pK~~lpv~~~~~~s~lql~~~~i~~l~~~~~~~~~g~~~~iPl~IMTS~~T~~~ 212 (625)
.|..+++|+|||+||||+|||||++.||+++|+ .+|+||||++++++++++..++ +.|||+||||+.||+.
T Consensus 85 ~~~~~~~k~avViLAGG~GTRmgs~~PK~l~~V--~~gk~~Le~~i~~i~~l~~~~G-------~~Ip~vImts~~t~e~ 155 (488)
T 2i5k_A 85 ENVSNLSKLAVLKLNGGLGTSMGCVGPKSVIEV--REGNTFLDLSVRQIEYLNRQYD-------SDVPLLLMNSFNTDKD 155 (488)
T ss_dssp CCSTTGGGEEEEEECCCBSGGGTCCSBSTTSCC--BTTBCHHHHHHHHHHHHHHHHT-------CCCEEEEECCTTTHHH
T ss_pred hhhhhcCCceEEEEcCCCcccCCCCCCcccccc--CCCCcHHHHHHHHHHHhHHhcC-------CCccEEEEECCCCHHH
Confidence 378888899999999999999999999999999 6799999999999999988876 4899999999999999
Q ss_pred HHHHHHhCCCCCCCCCcEEEEEecceeEEecCCCceecC-CCCCCccccccCCCchhhHHHhhcChHHHHHHcCceEEEE
Q 006923 213 TQELLESNSYFGMKPTQVKLLKQEKVACLDDNDARLAMD-PKNKYRIQTKPHGHGDVHALLYSSGLLKEWHDAGLKWVLF 291 (625)
Q Consensus 213 T~~~l~~~~~FGl~~~~V~~F~Q~~~P~l~~~~g~~~l~-~~~~~~i~~~P~GhGdi~~aL~~sGlL~~l~~~G~~yi~v 291 (625)
|++||++|++||+ +|++|.|+++||++ .+|++++. +.+++.++|+|+|||++|.+|+.+|++++|.++|++|++|
T Consensus 156 t~~~~~~~~~fg~---~i~~f~Q~~~P~i~-~d~~~~l~~~~~~~~~~~~P~GtGga~~~L~~sg~l~~l~~~g~~~v~V 231 (488)
T 2i5k_A 156 TEHLIKKYSANRI---RIRSFNQSRFPRVY-KDSLLPVPTEYDSPLDAWYPPGHGDLFESLHVSGELDALIAQGREILFV 231 (488)
T ss_dssp HHHHHGGGCSSSC---EEEEECCCCEECEE-TTTCCBSCSSSSSCTTSEECCCGGGHHHHHHHHTHHHHHHHTTCCEEEE
T ss_pred HHHHHHhccccCc---eEEEEEeCccceEc-cccceeeccCCCCCceeeecCCCchhhhhhhhcCcHHHHHhcCCCEEEE
Confidence 9999999999997 69999999999996 57888884 2234579999999999999999999999999999999999
Q ss_pred EeCCCccccccchHHHHHHhhcCCceeeeeccC-CccCccceEEEEecCCCceeEEEEeccCccHHHHhcCCCCCCCCCC
Q 006923 292 FQDTNGLLFKAIPASLGVSATKQYHVNSLAVPR-KAKEAIGGITRLTHADGRSMVINVEYNQLDPLLRATGFPDGDVNCE 370 (625)
Q Consensus 292 ~~vDN~L~~~~DP~~lG~~~~~~~~~~~kvv~r-~~~E~vG~i~~~~~~dG~~~v~nVEYsel~~~l~~~~~~~g~l~~~ 370 (625)
+|+|| |++.+||.+|||+..++++++++++++ .|.++.|++|+. +|+..+ |||+|++++.+.... +.
T Consensus 232 ~ngDn-L~~~~d~~~L~~~~~~~a~~t~~v~~~~~p~~~yG~Iv~~---dG~~~i--VE~~e~~~e~~~~~~------~~ 299 (488)
T 2i5k_A 232 SNGDN-LGATVDLKILNHMIETGAEYIMELTDKTRADVKGGTLISY---DGQVRL--LEVAQVPKEHIDEFK------NI 299 (488)
T ss_dssp ECTTB-SSCCCCHHHHHHHHHSCCSEEEEEEECCGGGSSSCEEEEE---TTEEEE--ECGGGSCTTSHHHHT------CT
T ss_pred EeCCc-CCCcccHHHHHHHHhcCCcEEEEEEEecCCCCceeEEEEE---CCcEEE--EEeccCCHHHHhhcc------cc
Confidence 99999 999999999999999999999999997 588889998864 888555 999999987554331 12
Q ss_pred CCCCCCccceeeEEEehhhhHHHHhhccCccccccCCcccCCCCCcccCchhHhHhhccccccCCCCCceeEEEeeccce
Q 006923 371 TGYSPFPGNINQLILELGPYMEELKKTGGAIKEFVNPKYKDASKTSFKSSTRLECMMQDYPKTLPPSAKVGFTVMDTWLA 450 (625)
Q Consensus 371 ~gf~~f~gNinn~~~~l~~l~~~l~~~~~~lp~~vnpK~~d~~~~~~~~~~rLE~~m~D~~~~f~~~~~~g~~~v~R~~~ 450 (625)
.+|++| |||+|||++++|.+.+++....||.|+|+|+.+. .....+++||||||||++++|++ ..+++|+|+ |
T Consensus 300 ~~~~~~--Ntgi~~f~~~~L~~~l~~~~~~lp~~v~~K~i~~-~~~~~~~~qlE~~~~d~~~~~~~---~~~~~V~R~-~ 372 (488)
T 2i5k_A 300 RKFTNF--NTNNLWINLKAVKRLIESSNLEMEIIPNQKTITR-DGHEINVLQLETACGAAIRHFDG---AHGVVVPRS-R 372 (488)
T ss_dssp TTCCEE--EEEEEEEEHHHHHHHHHTTCCCCCCBCCEECCCC------CEECCBCCGGGGGGGSSS---CEEEEECGG-G
T ss_pred cccCEE--EEEEEEEeHHHHHHHHhhccCCCcceecCccccC-CCCCCceEEeeehhhhHHhhccC---ceEEEeccc-c
Confidence 236655 9999999999999999987788999999998752 12223789999999999999853 245689996 8
Q ss_pred eecccCCCcccccCCCCCCCCChhhHHHHHHHHHHHHHHHcCCcccCCcccccCCeeecCCCeEEEcCCCCCCHHHHhhh
Q 006923 451 YAPVKNNPEDAAKVPKGNPYHSATSGEMAIYCANSLILRKAGAQVDDPVQEVFNGQEVEVWPRLTWKPKWGLTFSEIKNK 530 (625)
Q Consensus 451 FsPvKN~~~~~~~~~~g~~~dsp~t~~~dl~~~~~~~L~~~G~~v~~~~~~~~~g~~~~~~P~i~l~p~~~~~~~~~~~k 530 (625)
|+||||++++. ++++++ |...+|..+.++. .++++|+|+|+|.| .++++|.+|
T Consensus 373 F~PvKn~~~ll-------------~~~~~~------~~~~~g~~~~~~~-------~~e~~P~v~~~~~~-~~~~~~~~r 425 (488)
T 2i5k_A 373 FLPVKTCSDLL-------------LVKSDL------FRLEHGSLKLDPS-------RFGPNPLIKLGSHF-KKVSGFNAR 425 (488)
T ss_dssp CCBCCSHHHHH-------------HHTSTT------EEEETTEEEECTT-------CCSSCCEEEECGGG-SSHHHHHHH
T ss_pred cccccCCccHH-------------HHHHHH------HHHhcCcEeecCC-------cCCCCCeEEECCcc-cchhhHHhh
Confidence 99999987542 444444 4444566654332 27789999999995 589999999
Q ss_pred cCCCCccCCCceEEEEeceEEecCeEEEeEEEEEcCCCCeeEeCC--eeEcccee
Q 006923 531 VSGSCSVSQKSTMVIKGRNVVLEDLSLNGALIIDSVDDAEVRVGG--KVQNKGWT 583 (625)
Q Consensus 531 ~~~~~~i~~~s~L~v~G~~~~~~~v~l~G~liI~a~~g~~~~i~~--~v~N~g~~ 583 (625)
|+++|+|.++++|+|+|||+||+||+|+|+|+|.|++|.+++||+ +|+|+++.
T Consensus 426 f~~~p~i~~~~~l~v~Gdv~fg~~v~l~G~v~i~a~~~~~~~ip~g~~l~n~~~~ 480 (488)
T 2i5k_A 426 IPHIPKIVELDHLTITGNVFLGKDVTLRGTVIIVCSDGHKIDIPNGSILENVVVT 480 (488)
T ss_dssp CSSCCBCTTEEEEEEESSEEECTTCEEEEEEEEECCTTCCEEECTTCEEEEEEEE
T ss_pred cCCCccccccceEEEEeeeEEcCCcEEEEEEEEEcCCCCeEEeCCCCEEecceee
Confidence 999999999999999999999999999999999999999999965 99999886
No 10
>3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A*
Probab=98.51 E-value=1.1e-05 Score=89.03 Aligned_cols=190 Identities=19% Similarity=0.235 Sum_probs=122.2
Q ss_pred ceEEEEEcCCccccCCccCCcccCCCcCCCCcchHHHHHHHHHHHHHHhhhhccCCcccccEEEecCccchHHHHHHHHh
Q 006923 140 NAAFVLVAGGLGERLGYNGIKVALPAETTTGTCFLQNYIECILALQESSCRLAEGKCQEIPFAIMTSDDTHSRTQELLES 219 (625)
Q Consensus 140 kvavvlLaGGlGTRLG~~~pK~~lpv~~~~~~s~lql~~~~i~~l~~~~~~~~~g~~~~iPl~IMTS~~T~~~T~~~l~~ 219 (625)
.+|||+||||.||||....||.++|+. |++++++.++.+..+ + .--++|.++ ...+.++++|.+
T Consensus 12 ~~~vvILAaG~GtRm~~~~pK~l~pv~---gkp~i~~~l~~~~~~----g--------~~~i~vv~~-~~~~~i~~~~~~ 75 (501)
T 3st8_A 12 DTAVLVLAAGPGTRMRSDTPKVLHTLA---GRSMLSHVLHAIAKL----A--------PQRLIVVLG-HDHQRIAPLVGE 75 (501)
T ss_dssp CEEEEEEECSCCGGGCCSSCGGGCEET---TEEHHHHHHHHHHHH----C--------CSEEEEEEC-TTHHHHHHHHHH
T ss_pred CceEEEECCcCcccCCCCCCHHHeEEC---ChhHHHHHHHHHHhC----C--------CCEEEEEeC-CCHHHHHHHHHH
Confidence 689999999999999999999999995 999999999988654 2 223566666 456789999986
Q ss_pred C-CCCCCCCCcEEEEEecceeEEecCCCceecCCCCCCccccccCCCchh-hHHHhhcChHHHHHHcCceEEEEEeCCCc
Q 006923 220 N-SYFGMKPTQVKLLKQEKVACLDDNDARLAMDPKNKYRIQTKPHGHGDV-HALLYSSGLLKEWHDAGLKWVLFFQDTNG 297 (625)
Q Consensus 220 ~-~~FGl~~~~V~~F~Q~~~P~l~~~~g~~~l~~~~~~~i~~~P~GhGdi-~~aL~~sGlL~~l~~~G~~yi~v~~vDN~ 297 (625)
. +.||. +|.+..|. .|-|-|+- +.++ +.+...-...+.+.+-|.+
T Consensus 76 ~~~~~~~---~i~~~~q~------------------------~~lGTa~Av~~a~------~~l~~~~~~~~lvl~gd~~ 122 (501)
T 3st8_A 76 LADTLGR---TIDVALQD------------------------RPLGTGHAVLCGL------SALPDDYAGNVVVTSGDTP 122 (501)
T ss_dssp HHHHHTS---CCEEEECS------------------------SCCCHHHHHHHHH------TTSCTTCCSEEEEEETTCT
T ss_pred HHHhcCC---cEEEEEcC------------------------CCCCcHHHHHHHH------HHhccccccceeeecCcce
Confidence 3 34443 35554442 23455553 2222 2222223456777777776
Q ss_pred ccccc-chHHHHHHhhcCCceeeeeccCCccCccceEEEEecCCCceeEEEEeccCccHHHHhcCCCCCCCCCCCCCCCC
Q 006923 298 LLFKA-IPASLGVSATKQYHVNSLAVPRKAKEAIGGITRLTHADGRSMVINVEYNQLDPLLRATGFPDGDVNCETGYSPF 376 (625)
Q Consensus 298 L~~~~-DP~~lG~~~~~~~~~~~kvv~r~~~E~vG~i~~~~~~dG~~~v~nVEYsel~~~l~~~~~~~g~l~~~~gf~~f 376 (625)
|...- .-.++-++..+++++.+.+++-.....-|.+.+ ..+|+.. .-||.-+-++.-.. ..
T Consensus 123 l~~~~~~~~l~~~h~~~~~~~ti~~~~~~dp~~yG~i~~--~~~g~v~-~ivEk~~~~~~~~~---------------i~ 184 (501)
T 3st8_A 123 LLDADTLADLIATHRAVSAAVTVLTTTLDDPFGYGRILR--TQDHEVM-AIVEQTDATPSQRE---------------IR 184 (501)
T ss_dssp TCCHHHHHHHHHHHHHTTCSEEEEEEECSCCTTSCEEEE--CTTCCEE-EEECGGGCCHHHHH---------------CC
T ss_pred eecHHHHHHHHHHHhhccccceEeeeccCCchhcccccc--ccceeEE-eeccccCCChhhcc---------------ce
Confidence 65432 234567778888888877766543345676654 4566543 22776555443221 11
Q ss_pred ccceeeEEEehhhhHHHHhh
Q 006923 377 PGNINQLILELGPYMEELKK 396 (625)
Q Consensus 377 ~gNinn~~~~l~~l~~~l~~ 396 (625)
-.|+..++|+-+.+.+.+.+
T Consensus 185 ~in~Giy~f~~~~l~~~l~~ 204 (501)
T 3st8_A 185 EVNAGVYAFDIAALRSALSR 204 (501)
T ss_dssp EEEEEEEEEEHHHHHHHHTT
T ss_pred eeeceeeeecchhHHHhhhh
Confidence 23899999999887777753
No 11
>4ecm_A Glucose-1-phosphate thymidylyltransferase; HET: DAU; 2.30A {Bacillus anthracis} PDB: 3hl3_A*
Probab=97.77 E-value=0.00053 Score=69.27 Aligned_cols=181 Identities=15% Similarity=0.124 Sum_probs=109.4
Q ss_pred ceEEEEEcCCccccCCc---cCCcccCCCcCCCCcchHHHHHHHHHHHHHHhhhhccCCcccccEEEecCccchHHHHHH
Q 006923 140 NAAFVLVAGGLGERLGY---NGIKVALPAETTTGTCFLQNYIECILALQESSCRLAEGKCQEIPFAIMTSDDTHSRTQEL 216 (625)
Q Consensus 140 kvavvlLaGGlGTRLG~---~~pK~~lpv~~~~~~s~lql~~~~i~~l~~~~~~~~~g~~~~iPl~IMTS~~T~~~T~~~ 216 (625)
++.+|+||||.||||+- ..||.++|+. |++++++.++++... + .-.++|.|.....+.+.++
T Consensus 24 ~m~aiIlAaG~g~Rl~~lt~~~pK~ll~i~---g~pli~~~l~~l~~~----g--------~~~iivv~~~~~~~~~~~~ 88 (269)
T 4ecm_A 24 AMKGIILAGGTGSRLYPITKVTNKHLLPVG---RYPMIYHAVYKLKQC----D--------ITDIMIITGKEHMGDVVSF 88 (269)
T ss_dssp CEEEEEECCSCCGGGTTTTSSSCGGGSEET---TEEHHHHHHHHHHHT----T--------CCEEEEEECTTTHHHHHHH
T ss_pred CcEEEEECCCCccccccccCCCCceecEEC---CEEHHHHHHHHHHHC----C--------CCEEEEECChhhHHHHHHH
Confidence 67889999999999986 8899999984 999999999988642 1 1245677766555778888
Q ss_pred HHhCCCCCCCCCcEEEEEecceeEEecCCCceecCCCCCCccccccCCCchhhHHHhhcChHHHHHHcCceEEEEEeCCC
Q 006923 217 LESNSYFGMKPTQVKLLKQEKVACLDDNDARLAMDPKNKYRIQTKPHGHGDVHALLYSSGLLKEWHDAGLKWVLFFQDTN 296 (625)
Q Consensus 217 l~~~~~FGl~~~~V~~F~Q~~~P~l~~~~g~~~l~~~~~~~i~~~P~GhGdi~~aL~~sGlL~~l~~~G~~yi~v~~vDN 296 (625)
+.....||+. +.+..| ..+.|.|+.... .++.+ +-+++.|.+.|.
T Consensus 89 ~~~~~~~~~~---i~~~~~------------------------~~~~G~~~al~~-----a~~~~---~~~~~lv~~~D~ 133 (269)
T 4ecm_A 89 LGSGQEFGVS---FTYRVQ------------------------DKAGGIAQALGL-----CEDFV---GNDRMVVILGDN 133 (269)
T ss_dssp HTTSGGGTCE---EEEEEC------------------------SSCCCHHHHHHT-----THHHH---TTSEEEEEETTE
T ss_pred HhhccccCce---EEEeeC------------------------CccCcHHHHHHH-----HHHhc---CCCcEEEEeCCc
Confidence 8765555542 211111 013344332221 12222 147888999999
Q ss_pred ccccccchHHHHHHhhcCCceeeeeccCCccCccceEEEEecCCCceeEEEEeccCccHHHHhcCCCCCCCCCCCCCCCC
Q 006923 297 GLLFKAIPASLGVSATKQYHVNSLAVPRKAKEAIGGITRLTHADGRSMVINVEYNQLDPLLRATGFPDGDVNCETGYSPF 376 (625)
Q Consensus 297 ~L~~~~DP~~lG~~~~~~~~~~~kvv~r~~~E~vG~i~~~~~~dG~~~v~nVEYsel~~~l~~~~~~~g~l~~~~gf~~f 376 (625)
++. ..--.++..+..+++++.+-+++.......|.+.. .+|+ + +.+.|-+ ..+ . .+
T Consensus 134 ~~~-~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~g~v~~---d~g~--v--~~~~ekp------~~~----~------~~ 189 (269)
T 4ecm_A 134 IFS-DDIRPYVEEFTNQKEGAKVLLQSVDDPERFGVANI---QNRK--I--IEIEEKP------KEP----K------SS 189 (269)
T ss_dssp EES-SCSHHHHHHHHTSSSSEEEEEEECSCGGGSEEEEE---ETTE--E--EEEEESC------SSC----S------CS
T ss_pred cCc-cCHHHHHHHHHhcCCCeEEEEEECCCCCCceEEEE---cCCE--E--EEEEECC------CCC----C------Cc
Confidence 654 22334667777778887777666433345565543 1453 2 2332221 011 0 11
Q ss_pred ccceeeEEEehhhhHHHHh
Q 006923 377 PGNINQLILELGPYMEELK 395 (625)
Q Consensus 377 ~gNinn~~~~l~~l~~~l~ 395 (625)
..|+..++|+-+.+ +.+.
T Consensus 190 ~~~~Giy~~~~~~l-~~l~ 207 (269)
T 4ecm_A 190 YAVTGIYLYDSKVF-SYIK 207 (269)
T ss_dssp EEEEEEEEECTTHH-HHHT
T ss_pred EEEEEEEEECHHHH-Hhhh
Confidence 34999999997644 4443
No 12
>4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A*
Probab=97.77 E-value=0.00095 Score=72.02 Aligned_cols=64 Identities=20% Similarity=0.278 Sum_probs=50.0
Q ss_pred ceEEEEEcCCccccCCccCCcccCCCcCCCCcchHHHHHHHHHHHHHHhhhhccCCcccccEEEecCccchHHHHHHHHh
Q 006923 140 NAAFVLVAGGLGERLGYNGIKVALPAETTTGTCFLQNYIECILALQESSCRLAEGKCQEIPFAIMTSDDTHSRTQELLES 219 (625)
Q Consensus 140 kvavvlLaGGlGTRLG~~~pK~~lpv~~~~~~s~lql~~~~i~~l~~~~~~~~~g~~~~iPl~IMTS~~T~~~T~~~l~~ 219 (625)
++.+|+||||.|||||-+.||.++|+ .|++++++.++++.... .-.++|.|+.. ++.+.+++++
T Consensus 8 ~~~aiIlA~G~g~Rl~~~~pK~l~~i---~g~pli~~~l~~l~~~~------------~~~i~vv~~~~-~~~i~~~~~~ 71 (459)
T 4fce_A 8 SMSVVILAAGKGTRMYSDLPKVLHPL---AGKPMVQHVIDAAMKLG------------AQHVHLVYGHG-GELLKKTLAD 71 (459)
T ss_dssp CEEEEEEECCCCGGGCCSSCGGGSEE---TTEEHHHHHHHHHHHHT------------CSCEEEEESSC-HHHHHHHC--
T ss_pred cceEEEECCCCCccCCCCCCcccCee---CCeeHHHHHHHHHHhCC------------CCcEEEEeCCC-HHHHHHHhcc
Confidence 68899999999999998899999998 49999999999886541 12466777655 6677777654
No 13
>2qh5_A PMI, ALGA, mannose-6-phosphate isomerase; structural genomics, PSI, protein structure initi nysgrc; 2.30A {Helicobacter pylori}
Probab=97.65 E-value=0.00033 Score=72.43 Aligned_cols=192 Identities=16% Similarity=0.096 Sum_probs=99.5
Q ss_pred ceEEEEEcCCccccCC---c-cCCcccCCCcCCCCcchHHHHHHHHHHHHHHhhhhccCCcccccEEEecCccchHHHHH
Q 006923 140 NAAFVLVAGGLGERLG---Y-NGIKVALPAETTTGTCFLQNYIECILALQESSCRLAEGKCQEIPFAIMTSDDTHSRTQE 215 (625)
Q Consensus 140 kvavvlLaGGlGTRLG---~-~~pK~~lpv~~~~~~s~lql~~~~i~~l~~~~~~~~~g~~~~iPl~IMTS~~T~~~T~~ 215 (625)
++.+|+||||.||||+ . +.||.++|+ ..+++++++.++++... . -.++|.|+....+.+.+
T Consensus 4 ~~~avIlAgG~gtRl~plt~~~~pK~ll~i--~gg~pli~~~l~~l~~~---~----------~~i~vv~~~~~~~~i~~ 68 (308)
T 2qh5_A 4 KIKNILLSGGSGKRLWPLSRSLYPKQFLKL--FDHKSLFELSFKRNASL---V----------DETLIVCNEKHYFLALE 68 (308)
T ss_dssp CEEEEEECC-------------CCGGGCTT--BTTBCHHHHHHHHHHTT---C----------SEEEEEEEGGGHHHHHH
T ss_pred ccEEEEEcCCCCccCCccCCCCCCCEEEEC--CCCCCHHHHHHHHHHcc---C----------CCEEEEEChhHHHHHHH
Confidence 4678899999999995 2 579999998 24899999999988643 1 14577787765577788
Q ss_pred HHHhCCCCCCCCCcEEEEEecceeEEecCCCceecCCCCCCccccccCCCchh-hHHHhhcChHHHHHHcCceEEEEEeC
Q 006923 216 LLESNSYFGMKPTQVKLLKQEKVACLDDNDARLAMDPKNKYRIQTKPHGHGDV-HALLYSSGLLKEWHDAGLKWVLFFQD 294 (625)
Q Consensus 216 ~l~~~~~FGl~~~~V~~F~Q~~~P~l~~~~g~~~l~~~~~~~i~~~P~GhGdi-~~aL~~sGlL~~l~~~G~~yi~v~~v 294 (625)
+++++ ||++ ++.+..| . .|.|.|+. +.++. .+ ..-.++.+.+.
T Consensus 69 ~~~~~--~~~~--~~~~i~~------------------~------~~~gt~~al~~a~~------~l--~~~~~~lv~~~ 112 (308)
T 2qh5_A 69 EIKNE--IKNK--SVGFLLE------------------S------LSKNTANAIALSAL------MS--DKEDLLIVTPS 112 (308)
T ss_dssp HTTTT--CSSC--EEEEEEE------------------S------SCCCHHHHHHHHHH------TS--CTTSEEEEEES
T ss_pred HHHHh--hCCC--ccEEEeC------------------C------CCCChHHHHHHHHH------Hh--CCCCeEEEEcC
Confidence 88753 4432 2222111 0 13344443 22221 11 12347888999
Q ss_pred CCcccccc-chHHHHH---HhhcCCceeeeeccCCccCccceEEEEecCCCceeEEEEeccCccHHHHhcCCCCCCCCCC
Q 006923 295 TNGLLFKA-IPASLGV---SATKQYHVNSLAVPRKAKEAIGGITRLTHADGRSMVINVEYNQLDPLLRATGFPDGDVNCE 370 (625)
Q Consensus 295 DN~L~~~~-DP~~lG~---~~~~~~~~~~kvv~r~~~E~vG~i~~~~~~dG~~~v~nVEYsel~~~l~~~~~~~g~l~~~ 370 (625)
|.++...- --.++.. +..++.++.+-+.+..+...-|.+. + ..+|+. +++.|-+..-..+. ...
T Consensus 113 D~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~g~i~-~-d~~~~V----~~~~Ekp~~~~~~~-----~~~- 180 (308)
T 2qh5_A 113 DHLIKDLQAYENAIKKAIDLAQKGFLVTFGVSIDKPNTEFGYIE-S-PNGLDV----KRFIEKPSLDKAIE-----FQK- 180 (308)
T ss_dssp SCBCCCHHHHHHHHHHHHHHHHTTCEEEEEEECSSCCTTSEEEE-C-SSSSBC----SEEEESCCHHHHHH-----HHH-
T ss_pred CccccCHHHHHHHHHHHHHHHhcCCEEEEEEecCCCCCCceEEE-E-CCCCEE----EEEEECCChHHHHH-----Hhh-
Confidence 98642211 1223443 3455666666555544555567653 2 223432 33333332211100 000
Q ss_pred CCCCCCccceeeEEEehhhhHHHHhh
Q 006923 371 TGYSPFPGNINQLILELGPYMEELKK 396 (625)
Q Consensus 371 ~gf~~f~gNinn~~~~l~~l~~~l~~ 396 (625)
.| .+..|+..++|+-+.+.+.+.+
T Consensus 181 ~g--~~~~n~Giy~~~~~~ll~~l~~ 204 (308)
T 2qh5_A 181 SG--GFYFNSGMFVFQAGVFLDELKK 204 (308)
T ss_dssp HC--CEEEEEEEEEEEHHHHHHHHHH
T ss_pred cC--CeEEEeEEEEEEHHHHHHHHHH
Confidence 00 1134999999998876666654
No 14
>3oam_A 3-deoxy-manno-octulosonate cytidylyltransferase; center for structural genomics of infectious diseases; 1.75A {Vibrio cholerae o1 biovar el tor} SCOP: c.68.1.13
Probab=97.61 E-value=0.00026 Score=71.00 Aligned_cols=185 Identities=16% Similarity=0.094 Sum_probs=110.6
Q ss_pred ceEEEEEcCCccccCCccCCcccCCCcCCCCcchHHHHHHHHHHHHHHhhhhccCCcccccEEEecCccchHHHHHHHHh
Q 006923 140 NAAFVLVAGGLGERLGYNGIKVALPAETTTGTCFLQNYIECILALQESSCRLAEGKCQEIPFAIMTSDDTHSRTQELLES 219 (625)
Q Consensus 140 kvavvlLaGGlGTRLG~~~pK~~lpv~~~~~~s~lql~~~~i~~l~~~~~~~~~g~~~~iPl~IMTS~~T~~~T~~~l~~ 219 (625)
++.+|+||||.||||+ +|.++|+ .|++++++.++++... + .-.++|-|. ++.+.+++++
T Consensus 2 ~~~aiIlA~G~stRlp---~K~L~~i---~GkPli~~~l~~l~~~----~--------~~~ivVv~~---~~~i~~~~~~ 60 (252)
T 3oam_A 2 SFTVVIPARYQSTRLP---GKPLADI---GGKPMIQWVYEQAMQA----G--------ADRVIIATD---DERVEQAVQA 60 (252)
T ss_dssp CEEEEEECCCCCSSST---TGGGCEE---TTEEHHHHHHHHHHHT----T--------CSEEEEEES---CHHHHHHHHH
T ss_pred ceEEEEecCcCCCCCC---CcceeeE---CCEEHHHHHHHHHHhC----C--------CCeEEEECC---HHHHHHHHHH
Confidence 5789999999999995 7999998 4999999999987653 1 113456663 5888898886
Q ss_pred CCCCCCCCCcEEEEEecceeEEecCCCceecCCCCCCccccccCCCchhhHHHhhcChHHHHHHcCceEEEEEeCCCccc
Q 006923 220 NSYFGMKPTQVKLLKQEKVACLDDNDARLAMDPKNKYRIQTKPHGHGDVHALLYSSGLLKEWHDAGLKWVLFFQDTNGLL 299 (625)
Q Consensus 220 ~~~FGl~~~~V~~F~Q~~~P~l~~~~g~~~l~~~~~~~i~~~P~GhGdi~~aL~~sGlL~~l~~~G~~yi~v~~vDN~L~ 299 (625)
||.. + +... + ..|.|-|.++.++.. +...+-+++.+.+-|++|.
T Consensus 61 ---~g~~---v----------~~~~--------~------~~~~Gt~~~~~~~~~------l~~~~~d~vlv~~gD~Pli 104 (252)
T 3oam_A 61 ---FGGV---V----------CMTS--------P------NHQSGTERLAEVVAK------MAIPADHIVVNVQGDEPLI 104 (252)
T ss_dssp ---TTCE---E----------EECC--------T------TCCSHHHHHHHHHHH------TTCCTTSEEEECCTTCTTC
T ss_pred ---cCCE---E----------EEcC--------C------CCCCcHHHHHHHHHh------cCcCCCCEEEEEeCCeeec
Confidence 3421 1 1100 0 135566766665432 2112568899999999875
Q ss_pred cccch-HHHHHHhhcCCceeeeecc-CCccCc----cceEEEEecCCCceeEEEEeccCc--c--HH-HHhcCCCCCCCC
Q 006923 300 FKAIP-ASLGVSATKQYHVNSLAVP-RKAKEA----IGGITRLTHADGRSMVINVEYNQL--D--PL-LRATGFPDGDVN 368 (625)
Q Consensus 300 ~~~DP-~~lG~~~~~~~~~~~kvv~-r~~~E~----vG~i~~~~~~dG~~~v~nVEYsel--~--~~-l~~~~~~~g~l~ 368 (625)
...+. .++..+..+++++++-+++ .+|.+- +|.++. ..+|+. +.+++- + +. ...++. ...
T Consensus 105 ~~~~i~~l~~~~~~~~~~~~~~~~~v~~~~~~~~p~~g~vv~--d~~g~v----~~fsr~~i~~~~~~~~~~~~---~~~ 175 (252)
T 3oam_A 105 PPAIIRQVADNLAACSAPMATLAVEIEDEAEVFNPNAVKVIT--DKSGYA----LYFSRATIPWDRDNFAKADK---AIV 175 (252)
T ss_dssp CHHHHHHHHHHHHHSSCSEEEEEEEECCHHHHTCTTSCEEEE--CTTSBE----EEEESSCSSCCHHHHHSSSC---CCC
T ss_pred CHHHHHHHHHHHHhcCCCEEEEeeecCCHHHhhCCCceEEEE--CCCCeE----EEEeCCCCCCCCCccccccc---ccc
Confidence 44332 3455666667888777766 333322 244432 456652 334432 1 11 001100 000
Q ss_pred CCCCCCCCccceeeEEEehhhhHHHHh
Q 006923 369 CETGYSPFPGNINQLILELGPYMEELK 395 (625)
Q Consensus 369 ~~~gf~~f~gNinn~~~~l~~l~~~l~ 395 (625)
. .+-.|+..+.|+-+.+.+...
T Consensus 176 ----~-~~~~n~GiY~~~~~~l~~~~~ 197 (252)
T 3oam_A 176 ----Q-PLLRHIGIYAYRAGFINTYLD 197 (252)
T ss_dssp ----S-CEEEEEEEEEEETTHHHHHHH
T ss_pred ----c-cceEEEEEEEcCHHHHHHHHc
Confidence 1 123499999999988776654
No 15
>1fxo_A Glucose-1-phosphate thymidylyltransferase; rhamnose, nucleotidyltransferase, pyrophosphorylase, allostery; HET: TMP; 1.66A {Pseudomonas aeruginosa} SCOP: c.68.1.6 PDB: 1fzw_A 1g0r_A* 1g1l_A* 1g23_A* 1g2v_A* 1g3l_A* 1h5r_A* 1h5s_C* 1h5t_A* 1h5s_D* 1h5s_A* 1h5r_B* 1h5s_B* 1h5t_B* 1iim_A* 1iin_A* 3pkp_A* 3pkq_A* 1mp5_A* 1mp3_A* ...
Probab=97.50 E-value=0.0011 Score=68.12 Aligned_cols=150 Identities=18% Similarity=0.194 Sum_probs=87.3
Q ss_pred eEEEEEcCCccccCC---ccCCcccCCCcCCCCcchHHHHHHHHHHHHHHhhhhccCCcccccEEEecCccchHHHHHHH
Q 006923 141 AAFVLVAGGLGERLG---YNGIKVALPAETTTGTCFLQNYIECILALQESSCRLAEGKCQEIPFAIMTSDDTHSRTQELL 217 (625)
Q Consensus 141 vavvlLaGGlGTRLG---~~~pK~~lpv~~~~~~s~lql~~~~i~~l~~~~~~~~~g~~~~iPl~IMTS~~T~~~T~~~l 217 (625)
+..|+||||.||||+ ...||.++|+. |++++++.++.+... + .-.++|.|+....+...+++
T Consensus 3 ~~aIILAgG~gtRl~plT~~~pK~llpi~---gkpli~~~l~~l~~~----g--------i~~I~vv~~~~~~~~i~~~l 67 (293)
T 1fxo_A 3 RKGIILAGGSGTRLHPATLAISKQLLPVY---DKPMIYYPLSTLMLA----G--------IREILIISTPQDTPRFQQLL 67 (293)
T ss_dssp EEEEEECCCCCTTTTTHHHHSCGGGSEET---TEETTHHHHHHHHHT----T--------CCEEEEEECTTTHHHHHHHH
T ss_pred ceEEEECCCCCCcCccccCCCCceeCeEC---CEeHHHHHHHHHHHC----C--------CCEEEEEeccccHHHHHHHH
Confidence 567889999999998 46799999984 899999999887542 2 11345667666677888888
Q ss_pred HhCCCCCCCCCcEEEEEecceeEEecCCCceecCCCCCCccccccCCCchhhHHHhhcChHHHHHHcCceEEEEEeCCCc
Q 006923 218 ESNSYFGMKPTQVKLLKQEKVACLDDNDARLAMDPKNKYRIQTKPHGHGDVHALLYSSGLLKEWHDAGLKWVLFFQDTNG 297 (625)
Q Consensus 218 ~~~~~FGl~~~~V~~F~Q~~~P~l~~~~g~~~l~~~~~~~i~~~P~GhGdi~~aL~~sGlL~~l~~~G~~yi~v~~vDN~ 297 (625)
.+...||+. +.+..| + .|.|-++.+..- ++.+ . + +.+.+...||+
T Consensus 68 ~~g~~~g~~---i~~~~~-------------------~-----~~~G~~~al~~a-----~~~i-~-~-~~~~lv~gD~~ 112 (293)
T 1fxo_A 68 GDGSNWGLD---LQYAVQ-------------------P-----SPDGLAQAFLIG-----ESFI-G-N-DLSALVLGDNL 112 (293)
T ss_dssp TTSGGGTCE---EEEEEC-------------------S-----SCCCGGGHHHHT-----HHHH-T-T-SEEEEEETTEE
T ss_pred hcccccCce---EEEeeC-------------------C-----CCCCHHHHHHHH-----HHHh-C-C-CCEEEEECChh
Confidence 764444532 221111 0 255655543321 1222 1 2 44555568998
Q ss_pred cccccchHHHHHHhhcCCceeeeeccCCccCccceEEEEecCCCc
Q 006923 298 LLFKAIPASLGVSATKQYHVNSLAVPRKAKEAIGGITRLTHADGR 342 (625)
Q Consensus 298 L~~~~DP~~lG~~~~~~~~~~~kvv~r~~~E~vG~i~~~~~~dG~ 342 (625)
+....--.++-.+.+++.+...-+++-...++.|++.. ..+|+
T Consensus 113 ~~~~~l~~~l~~~~~~~~~~~v~~~~v~dp~~~g~v~~--d~~g~ 155 (293)
T 1fxo_A 113 YYGHDFHELLGSASQRQTGASVFAYHVLDPERYGVVEF--DQGGK 155 (293)
T ss_dssp EECTTHHHHHHHHHTCCSSEEEEEEECSCGGGSEEEEE--CTTSC
T ss_pred ccCccHHHHHHHHHhcCCCcEEEEEECCCcccCcEEEE--CCCCc
Confidence 75432234455555455555444444222345665542 33454
No 16
>3brk_X Glucose-1-phosphate adenylyltransferase; ADP-glucose pyrophosphorylase, allostery, kinetics, structure-function relationships; 2.10A {Agrobacterium tumefaciens}
Probab=97.49 E-value=0.0012 Score=70.78 Aligned_cols=205 Identities=13% Similarity=0.133 Sum_probs=110.5
Q ss_pred cceEEEEEcCCccccCC---ccCCcccCCCcCCCCc-chHHHHHHHHHHHHHHhhhhccCCcccccEEEecCccchHHHH
Q 006923 139 KNAAFVLVAGGLGERLG---YNGIKVALPAETTTGT-CFLQNYIECILALQESSCRLAEGKCQEIPFAIMTSDDTHSRTQ 214 (625)
Q Consensus 139 ~kvavvlLaGGlGTRLG---~~~pK~~lpv~~~~~~-s~lql~~~~i~~l~~~~~~~~~g~~~~iPl~IMTS~~T~~~T~ 214 (625)
.++.+|+||||.||||+ .+.||.++|+. |+ +++++.++++.+. + .-.++|.|.. .++.+.
T Consensus 11 ~~~~avILAaG~gtRl~plT~~~pK~llpi~---gk~pli~~~l~~l~~~----g--------i~~i~vv~~~-~~~~i~ 74 (420)
T 3brk_X 11 RDAMAYVLAGGRGSRLKELTDRRAKPAVYFG---GKARIIDFALSNALNS----G--------IRRIGVATQY-KAHSLI 74 (420)
T ss_dssp GGEEEEEEECCCCGGGGGGGSSSCGGGSEET---TTEETHHHHHHHHHHT----T--------CCEEEEEECT-TCHHHH
T ss_pred hceEEEEEcCCCCCccchhhcCCcccccccC---CCCcHHHHHHHHHHhC----C--------CCeEEEEeCC-ChHHHH
Confidence 46788999999999998 77899999984 88 9999999988652 1 1135666654 457888
Q ss_pred HHHHhCCCCCCCCCcEEEEEecceeEEecCCCceecCCCCCCccccccCCCchhhHHHhhcChHHHHHHcCceEEEEEeC
Q 006923 215 ELLESNSYFGMKPTQVKLLKQEKVACLDDNDARLAMDPKNKYRIQTKPHGHGDVHALLYSSGLLKEWHDAGLKWVLFFQD 294 (625)
Q Consensus 215 ~~l~~~~~FGl~~~~V~~F~Q~~~P~l~~~~g~~~l~~~~~~~i~~~P~GhGdi~~aL~~sGlL~~l~~~G~~yi~v~~v 294 (625)
+++++. ||+... +.+..++.+..... . .++ .| +-|-++. ++. .++.+...+-+++.+.+.
T Consensus 75 ~~~~~~--~~~~~~----~~~~~v~i~~~~~~---~--~~~---~~-~~Gt~~a---l~~--a~~~l~~~~~~~~lv~~~ 134 (420)
T 3brk_X 75 RHLQRG--WDFFRP----ERNESFDILPASQR---V--SET---QW-YEGTADA---VYQ--NIDIIEPYAPEYMVILAG 134 (420)
T ss_dssp HHHHHH--SCCCCG----GGTCEEEEECCC---------------C-CCCHHHH---HHT--THHHHHHHCCSEEEEEES
T ss_pred HHHhhh--hccccc----cccCCEEEeCcccc---c--cCC---cc-ccCCHHH---HHH--HHHHHHhcCCCEEEEecc
Confidence 888874 444210 00111222210000 0 000 00 1343332 221 134443335678999999
Q ss_pred CCccccccchHHHHHHhhcCCceeeeeccC--CccCccceEEEEecCCCceeEEEEeccCccHHHHhcCCCCCCCCCCCC
Q 006923 295 TNGLLFKAIPASLGVSATKQYHVNSLAVPR--KAKEAIGGITRLTHADGRSMVINVEYNQLDPLLRATGFPDGDVNCETG 372 (625)
Q Consensus 295 DN~L~~~~DP~~lG~~~~~~~~~~~kvv~r--~~~E~vG~i~~~~~~dG~~~v~nVEYsel~~~l~~~~~~~g~l~~~~g 372 (625)
|. +....--.++..+..+++++.+-+.+. .....-|.+.. ..+|+. +.+.|-+.. + ....+..+
T Consensus 135 D~-~~~~~l~~l~~~~~~~~~~~tl~~~~~~~~~~~~~g~v~~--d~~g~v----~~~~ekp~~------~-~~~~~~~~ 200 (420)
T 3brk_X 135 DH-IYKMDYEYMLQQHVDSGADVTIGCLEVPRMEATGFGVMHV--NEKDEI----IDFIEKPAD------P-PGIPGNEG 200 (420)
T ss_dssp SC-EECBCTHHHHHHHHHTTCSEEEEEEEEETTGGGGSEEEEE--CTTSBE----EEEEESCSS------C-CCBTTBTT
T ss_pred cE-EEchHHHHHHHHHHHcCCeEEEEEeecCccccCcccEEEE--CCCCcE----EEeEeCCCc------c-cccccccc
Confidence 98 433222346677777777776555442 22334565432 334542 333332210 0 00000000
Q ss_pred CCCCccceeeEEEehhhhHHHHh
Q 006923 373 YSPFPGNINQLILELGPYMEELK 395 (625)
Q Consensus 373 f~~f~gNinn~~~~l~~l~~~l~ 395 (625)
.+..|+..++|+-+.+.+.++
T Consensus 201 --~~~~~~Giy~~~~~~l~~~l~ 221 (420)
T 3brk_X 201 --FALASMGIYVFHTKFLMEAVR 221 (420)
T ss_dssp --EEEEEEEEEEEEHHHHHHHHT
T ss_pred --ceEEeeeeEEEeHHHHHHHHH
Confidence 123499999999887666664
No 17
>1yp2_A Glucose-1-phosphate adenylyltransferase small subunit; ADP-glucose synthase, ADP-glucose pyrophosphorylase, agpase B; HET: PMB; 2.11A {Solanum tuberosum} SCOP: b.81.1.4 c.68.1.6 PDB: 1yp3_A* 1yp4_A*
Probab=97.47 E-value=0.0011 Score=71.77 Aligned_cols=216 Identities=13% Similarity=0.156 Sum_probs=106.3
Q ss_pred ceEEEEEcCCccccCC---ccCCcccCCCcCCCCc-chHHHHHHHHHHHHHHhhhhccCCcccccEEEecCccchHHHHH
Q 006923 140 NAAFVLVAGGLGERLG---YNGIKVALPAETTTGT-CFLQNYIECILALQESSCRLAEGKCQEIPFAIMTSDDTHSRTQE 215 (625)
Q Consensus 140 kvavvlLaGGlGTRLG---~~~pK~~lpv~~~~~~-s~lql~~~~i~~l~~~~~~~~~g~~~~iPl~IMTS~~T~~~T~~ 215 (625)
++.+|+||||.||||+ .+.||.++|+. |+ +++++.++++.+. + .-.++|.|+. .++.+.+
T Consensus 20 ~~~avILAaG~gtRl~plT~~~pK~llpi~---g~~pli~~~l~~l~~~----g--------~~~i~vv~~~-~~~~i~~ 83 (451)
T 1yp2_A 20 SVLGIILGGGAGTRLYPLTKKRAKPAVPLG---ANYRLIDIPVSNCLNS----N--------ISKIYVLTQF-NSASLNR 83 (451)
T ss_dssp HEEEEEC------CCTTTTTTSCGGGCEET---TTEETTHHHHHHHHHT----T--------CCEEEEEESC-CCHHHHH
T ss_pred ceEEEEECCCCCCcccchhcCCcceeeEEC---CcceeHHHHHHHHHHC----C--------CCEEEEEecc-CHHHHHH
Confidence 4788999999999998 67899999984 88 9999999888642 2 1235666765 4567888
Q ss_pred HHHhCCCCCCCCCcEEEEEecceeEEecCCCceecCCCCCCccccccCCCchhhHHHhhcChHHHHHHcCceEEEEEeCC
Q 006923 216 LLESNSYFGMKPTQVKLLKQEKVACLDDNDARLAMDPKNKYRIQTKPHGHGDVHALLYSSGLLKEWHDAGLKWVLFFQDT 295 (625)
Q Consensus 216 ~l~~~~~FGl~~~~V~~F~Q~~~P~l~~~~g~~~l~~~~~~~i~~~P~GhGdi~~aL~~sGlL~~l~~~G~~yi~v~~vD 295 (625)
+|.+. +|.+-. .++.++.+..+... ..+.. ...+-|.|+-.... ++.+...+-+++.+.+.|
T Consensus 84 ~~~~~--~~~~~~--~~~~~~~v~i~~~~--------~~~~~-~~~~~Gt~~al~~a-----~~~~~~~~~~~~lv~~~D 145 (451)
T 1yp2_A 84 HLSRA--YASNMG--GYKNEGFVEVLAAQ--------QSPEN-PDWFQGTADAVRQY-----LWLFEEHTVLEYLILAGD 145 (451)
T ss_dssp HHHHH--CC----------CCEEEEEESC--------SSTTS-CCCCCSHHHHHHHT-----HHHHTTSCCSEEEEECSC
T ss_pred HHhhh--hhcccc--cccccCcEEEeccc--------ccccc-cccccCcHHHHHHH-----HHHHHhcCCCeEEEecCc
Confidence 88752 121000 01122223332110 00000 01234554322221 233322346889999999
Q ss_pred CccccccchHHHHHHhhcCCceeeeeccCC--ccCccceEEEEecCCCceeEEEEeccCccHHHH--hcCCCCCCCCCCC
Q 006923 296 NGLLFKAIPASLGVSATKQYHVNSLAVPRK--AKEAIGGITRLTHADGRSMVINVEYNQLDPLLR--ATGFPDGDVNCET 371 (625)
Q Consensus 296 N~L~~~~DP~~lG~~~~~~~~~~~kvv~r~--~~E~vG~i~~~~~~dG~~~v~nVEYsel~~~l~--~~~~~~g~l~~~~ 371 (625)
. +....--.++.++..+++++.+-+.+.. +...-|.+. + ..+|+ + +++.|-+..-. ....+..-+....
T Consensus 146 ~-~~~~~l~~l~~~~~~~~~~~tl~~~~~~~~~~~~~g~v~-~-d~~~~--v--~~~~ekp~~~~~~~~~~~~~~l~~~~ 218 (451)
T 1yp2_A 146 H-LYRMDYEKFIQAHRETDADITVAALPMDEKRATAFGLMK-I-DEEGR--I--IEFAEKPQGEQLQAMKVDTTILGLDD 218 (451)
T ss_dssp E-ECCCCHHHHHHHHHHTTCSEEEEEEEECHHHHTTSEEEE-E-CTTSB--E--EEEEESCCHHHHHHTCCCGGGGSCCH
T ss_pred E-EEcCCHHHHHHHHHHcCCcEEEEEEEcChhhcccCCEEE-E-CCCCC--E--EEEEECCCchhhcccccccccccccc
Confidence 8 4332223567777777887766444422 334556543 2 23454 2 44444432211 0000000000000
Q ss_pred ---CCCCCccceeeEEEehhhhHHHHhh
Q 006923 372 ---GYSPFPGNINQLILELGPYMEELKK 396 (625)
Q Consensus 372 ---gf~~f~gNinn~~~~l~~l~~~l~~ 396 (625)
.-..+..|+..++|+-+.+.+.++.
T Consensus 219 ~~~~~~~~~~~~Giy~~~~~~l~~~l~~ 246 (451)
T 1yp2_A 219 KRAKEMPFIASMGIYVISKDVMLNLLRD 246 (451)
T ss_dssp HHHHHCCEEEEEEEEEEEHHHHHHHHHT
T ss_pred ccccCCcceEEeeEEEEcHHHHHHHHHh
Confidence 0001234899999998877666654
No 18
>2y6p_A 3-deoxy-manno-octulosonate cytidylyltransferase; lipid A; HET: CTP; 2.10A {Aquifex aeolicus}
Probab=97.34 E-value=0.0011 Score=64.86 Aligned_cols=113 Identities=13% Similarity=0.144 Sum_probs=71.5
Q ss_pred ceEEEEEcCCccccCCccCCcccCCCcCCCCcchHHHHHHHHHHHHHHhhhhccCCcccccEEEecCccchHHHHHHHHh
Q 006923 140 NAAFVLVAGGLGERLGYNGIKVALPAETTTGTCFLQNYIECILALQESSCRLAEGKCQEIPFAIMTSDDTHSRTQELLES 219 (625)
Q Consensus 140 kvavvlLaGGlGTRLG~~~pK~~lpv~~~~~~s~lql~~~~i~~l~~~~~~~~~g~~~~iPl~IMTS~~T~~~T~~~l~~ 219 (625)
++.+|+||||.||||| ||.++|+. |++++++.++++... .. .++|.|.. +.+.+++++
T Consensus 2 ~~~aiIlA~G~g~R~~---~K~l~~i~---g~pli~~~l~~~~~~---~~----------~i~v~~~~---~~i~~~~~~ 59 (234)
T 2y6p_A 2 RRAVIIPARLGSTRLK---EKPLKNLL---GKPLIRWVVEGLVKT---GE----------RVILATDS---ERVKEVVED 59 (234)
T ss_dssp CEEEEEECCSCCTTTT---TGGGCEET---TEEHHHHHHHHHHTT---TS----------CEEEEESC---HHHHHHHTT
T ss_pred ceEEEEEcCCCCCCCC---CCcceeEC---CEEHHHHHHHHHHHh---CC----------EEEEECCh---HHHHHHHHh
Confidence 4678999999999998 99999984 999999999988643 11 35666654 566666653
Q ss_pred CCCCCCCCCcEEEEEecceeEEecCCCceecCCCCCCccccccCCCchhhHHHhhcChHHHHHHcCceEEEEEeCCCccc
Q 006923 220 NSYFGMKPTQVKLLKQEKVACLDDNDARLAMDPKNKYRIQTKPHGHGDVHALLYSSGLLKEWHDAGLKWVLFFQDTNGLL 299 (625)
Q Consensus 220 ~~~FGl~~~~V~~F~Q~~~P~l~~~~g~~~l~~~~~~~i~~~P~GhGdi~~aL~~sGlL~~l~~~G~~yi~v~~vDN~L~ 299 (625)
+ . . .+... + ..+.|.|+++.++.. -+-+++.+.+.|.++.
T Consensus 60 ~----~---~----------~~~~~--------~------~~~~g~~~~~~~~~~---------~~~~~vlv~~~D~P~~ 99 (234)
T 2y6p_A 60 L----C---E----------VFLTP--------S------DLPSGSDRVLYVVRD---------LDVDLIINYQGDEPFV 99 (234)
T ss_dssp T----S---E----------EEECC--------T------TCCSHHHHHHHHHTT---------CCCSEEEECCTTCCCC
T ss_pred c----e---E----------EEECC--------c------ccccchHHHHHHHHh---------CCCCEEEEecCCcCcC
Confidence 1 0 1 11100 0 124455666544432 1457999999999876
Q ss_pred cccc-hHHHHHHhhcC
Q 006923 300 FKAI-PASLGVSATKQ 314 (625)
Q Consensus 300 ~~~D-P~~lG~~~~~~ 314 (625)
...+ -.++..+...+
T Consensus 100 ~~~~i~~l~~~~~~~~ 115 (234)
T 2y6p_A 100 YEEDIKLIFRELEKGE 115 (234)
T ss_dssp CHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHhCC
Confidence 5322 23345555555
No 19
>1lvw_A Glucose-1-phosphate thymidylyltransferase; protein nucleotide complex, nucleotide binding fold; HET: TYD; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.68.1.6
Probab=97.32 E-value=0.0032 Score=64.80 Aligned_cols=70 Identities=21% Similarity=0.244 Sum_probs=52.3
Q ss_pred eEEEEEcCCccccCC---ccCCcccCCCcCCCCcchHHHHHHHHHHHHHHhhhhccCCcccccEEEecCccchHHHHHHH
Q 006923 141 AAFVLVAGGLGERLG---YNGIKVALPAETTTGTCFLQNYIECILALQESSCRLAEGKCQEIPFAIMTSDDTHSRTQELL 217 (625)
Q Consensus 141 vavvlLaGGlGTRLG---~~~pK~~lpv~~~~~~s~lql~~~~i~~l~~~~~~~~~g~~~~iPl~IMTS~~T~~~T~~~l 217 (625)
+..|+||||.||||+ ...||.++|+. |++++++.++.+... + .-.++|.|+....+...+++
T Consensus 4 m~aIILAgG~GtRl~plT~~~pK~llpi~---gkpli~~~l~~l~~~----g--------i~~Iivv~~~~~~~~i~~~l 68 (295)
T 1lvw_A 4 MKGIVLAGGSGTRLYPITRAVSKQLLPIY---DKPMIYYPLSVLMLA----G--------IRDILIISTPRDLPLYRDLL 68 (295)
T ss_dssp CEEEEECCCCCSTTTTTTTSSCGGGSEET---TEETTHHHHHHHHHT----T--------CCEEEEEECTTTHHHHHHHH
T ss_pred eEEEEECCCCCCccccccCCCCceecEEC---CeeHHHHHHHHHHHC----C--------CCeEEEEeccchHHHHHHHh
Confidence 467889999999998 57899999984 899999999888642 2 11356667666667788888
Q ss_pred HhCCCCCC
Q 006923 218 ESNSYFGM 225 (625)
Q Consensus 218 ~~~~~FGl 225 (625)
.+...+|+
T Consensus 69 ~~g~~~g~ 76 (295)
T 1lvw_A 69 GDGSQFGV 76 (295)
T ss_dssp TTSGGGTS
T ss_pred hhccccCc
Confidence 76444554
No 20
>3k8d_A 3-deoxy-manno-octulosonate cytidylyltransferase; KDSB synthetase KDO complex, lipopolysaccharide biosynthesis magnesium, nucleotidyltransferase; HET: KDO CTP; 1.90A {Escherichia coli} SCOP: c.68.1.13 PDB: 3k8e_C 1vh1_A 3jtj_A*
Probab=97.27 E-value=0.0016 Score=66.24 Aligned_cols=187 Identities=16% Similarity=0.136 Sum_probs=109.7
Q ss_pred ceEEEEEcCCccccCCccCCcccCCCcCCCCcchHHHHHHHHHHHHHHhhhhccCCcccccEEEecCccchHHHHHHHHh
Q 006923 140 NAAFVLVAGGLGERLGYNGIKVALPAETTTGTCFLQNYIECILALQESSCRLAEGKCQEIPFAIMTSDDTHSRTQELLES 219 (625)
Q Consensus 140 kvavvlLaGGlGTRLG~~~pK~~lpv~~~~~~s~lql~~~~i~~l~~~~~~~~~g~~~~iPl~IMTS~~T~~~T~~~l~~ 219 (625)
++.+|+||||.||||+ .|.++|+ .|++++++.++++... + .-.++|-|. ++.+.+++++
T Consensus 18 ~~~aIIlA~G~stRlp---~K~L~~i---~GkPmi~~~l~~l~~~----~--------i~~IvV~t~---~~~i~~~~~~ 76 (264)
T 3k8d_A 18 SFVVIIPARYASTRLP---GKPLVDI---NGKPMIVHVLERARES----G--------AERIIVATD---HEDVARAVEA 76 (264)
T ss_dssp CCEEEEECCSCCSSST---TGGGCEE---TTEEHHHHHHHHHHHT----T--------CSEEEEEES---CHHHHHHHHH
T ss_pred ceEEEEEcCCCCCCCC---CcceeeE---CCeEHHHHHHHHHHhC----C--------CCEEEEECC---HHHHHHHHHH
Confidence 6889999999999995 5999998 4999999999988643 1 113466663 5778888875
Q ss_pred CCCCCCCCCcEEEEEecceeEEecCCCceecCCCCCCccccccCCCchhhHHHhhcChHHHHHHcCceEEEEEeCCCccc
Q 006923 220 NSYFGMKPTQVKLLKQEKVACLDDNDARLAMDPKNKYRIQTKPHGHGDVHALLYSSGLLKEWHDAGLKWVLFFQDTNGLL 299 (625)
Q Consensus 220 ~~~FGl~~~~V~~F~Q~~~P~l~~~~g~~~l~~~~~~~i~~~P~GhGdi~~aL~~sGlL~~l~~~G~~yi~v~~vDN~L~ 299 (625)
||.. + .+.. . ..|.|-|.+..++. .+...+-+++.+.+-|++|.
T Consensus 77 ---~g~~---v---------~~~~---------~------~~~~Gt~~i~~~~~------~l~~~~~d~vlv~~gD~Pli 120 (264)
T 3k8d_A 77 ---AGGE---V---------CMTR---------A------DHQSGTERLAEVVE------KCAFSDDTVIVNVQGDEPMI 120 (264)
T ss_dssp ---TTCE---E---------EECC---------T------TCCSHHHHHHHHHH------HHTCCTTCEEEEECTTCTTC
T ss_pred ---cCCE---E---------EEec---------C------CCCCCHHHHHHHHH------HhccCCCCEEEEEcCCcccC
Confidence 3321 1 1110 0 13456666665543 22223568999999999886
Q ss_pred cccc-hHHHHHHhhcCCceeeeecc-CCccC-----ccceEEEEecCCCceeEEEEeccCccH-HHHhcC-CCCCCCCCC
Q 006923 300 FKAI-PASLGVSATKQYHVNSLAVP-RKAKE-----AIGGITRLTHADGRSMVINVEYNQLDP-LLRATG-FPDGDVNCE 370 (625)
Q Consensus 300 ~~~D-P~~lG~~~~~~~~~~~kvv~-r~~~E-----~vG~i~~~~~~dG~~~v~nVEYsel~~-~l~~~~-~~~g~l~~~ 370 (625)
...+ -.++..+...++++++-+++ +.+.+ .++++ ...+|+. +.+++-+. .-+... .......
T Consensus 121 ~~~~i~~li~~~~~~~~~~~~~~~~v~d~~~~~~p~~vkVv---~d~~g~~----l~fsr~~ip~~r~~~~~~~~~~~-- 191 (264)
T 3k8d_A 121 PATIIRQVADNLAQRQVGMATLAVPIHNAEEAFNPNAVKVV---LDAEGYA----LYFSRATIPWDRDRFAEGLETVG-- 191 (264)
T ss_dssp CHHHHHHHHHHHHTSSCSEEEEEEECCSHHHHTCTTSCEEE---ECTTSBE----EEEESSCCSCCHHHHHHCSSCCC--
T ss_pred CHHHHHHHHHHHhhcCCCEEEEEEEcCCHHHccCCCceEEE---ECCCCeE----EEEecCCCCCCCccccccccccC--
Confidence 5332 23455555677888888876 33332 23333 2456753 44555321 001000 0000000
Q ss_pred CCCCCCccceeeEEEehhhhHHHHh
Q 006923 371 TGYSPFPGNINQLILELGPYMEELK 395 (625)
Q Consensus 371 ~gf~~f~gNinn~~~~l~~l~~~l~ 395 (625)
. .+-.|+....|+-+++.....
T Consensus 192 --~-~~~~~~GiY~y~~~~l~~~~~ 213 (264)
T 3k8d_A 192 --D-NFLRHLGIYGYRAGFIRRYVN 213 (264)
T ss_dssp --S-CCEEECSEEEEEHHHHHHHHH
T ss_pred --C-cceEEEEEEEECHHHHHHHHh
Confidence 1 123599999999987766553
No 21
>1h7e_A 3-deoxy-manno-octulosonate cytidylyltransferase; nucleotidyltransferase, CMP-KDO synthetase, nucleoside monophosphate glycosides; 1.83A {Escherichia coli} SCOP: c.68.1.13 PDB: 1gqc_A* 1gq9_A 1h6j_A 1h7f_A* 1h7g_A* 1h7h_A* 1h7t_A*
Probab=97.25 E-value=0.0011 Score=65.49 Aligned_cols=126 Identities=16% Similarity=0.114 Sum_probs=78.8
Q ss_pred ceEEEEEcCCccccCCccCCcccCCCcCCCCcchHHHHHHHHHHHHHHhhhhccCCcccccEEEecCccchHHHHHHHHh
Q 006923 140 NAAFVLVAGGLGERLGYNGIKVALPAETTTGTCFLQNYIECILALQESSCRLAEGKCQEIPFAIMTSDDTHSRTQELLES 219 (625)
Q Consensus 140 kvavvlLaGGlGTRLG~~~pK~~lpv~~~~~~s~lql~~~~i~~l~~~~~~~~~g~~~~iPl~IMTS~~T~~~T~~~l~~ 219 (625)
++.+|+||||.||||| ||.++|+ .|++++++.++++... + ..-.++|.|+. +.+.+++++
T Consensus 2 ~~~aiIlA~G~~~R~~---~K~l~~i---~g~pli~~~i~~~~~~----~-------~~~~ivvv~~~---~~i~~~~~~ 61 (245)
T 1h7e_A 2 KAVIVIPARYGSSRLP---GKPLLDI---VGKPMIQHVYERALQV----A-------GVAEVWVATDD---PRVEQAVQA 61 (245)
T ss_dssp CEEEEEECCSCCSSST---TGGGCEE---TTEEHHHHHHHHHHTC----T-------TCCEEEEEESC---HHHHHHHHH
T ss_pred CeEEEEEcCCcCCCCC---CCccccc---CCchHHHHHHHHHHhC----C-------CCCeEEEECCc---HHHHHHHHH
Confidence 4678999999999997 9999998 4999999998887542 1 01246677753 677888876
Q ss_pred CCCCCCCCCcEEEEEecceeEEecCCCceecCCCCCCccccccCCCchhhHHHhhcChHHHHHHcCceEEEEEeCCCccc
Q 006923 220 NSYFGMKPTQVKLLKQEKVACLDDNDARLAMDPKNKYRIQTKPHGHGDVHALLYSSGLLKEWHDAGLKWVLFFQDTNGLL 299 (625)
Q Consensus 220 ~~~FGl~~~~V~~F~Q~~~P~l~~~~g~~~l~~~~~~~i~~~P~GhGdi~~aL~~sGlL~~l~~~G~~yi~v~~vDN~L~ 299 (625)
+ |. .++... + ..+.|.++++.++.. + +-+++.+.+.|.++.
T Consensus 62 ~---~~-------------~~~~~~--------~------~~~~g~~~~~~~~~~------~---~~~~~lv~~~D~P~~ 102 (245)
T 1h7e_A 62 F---GG-------------KAIMTR--------N------DHESGTDRLVEVMHK------V---EADIYINLQGDEPMI 102 (245)
T ss_dssp T---TC-------------EEEECC--------S------CCSSHHHHHHHHHHH------S---CCSEEEECCTTCTTC
T ss_pred c---CC-------------eEEeCC--------C------ccCCcHHHHHHHHHh------C---CCCEEEEEcCCcCcC
Confidence 3 21 112110 0 113344555554432 1 457899999999875
Q ss_pred cccc-hHHHHHHhhc-CCceeeeeccC
Q 006923 300 FKAI-PASLGVSATK-QYHVNSLAVPR 324 (625)
Q Consensus 300 ~~~D-P~~lG~~~~~-~~~~~~kvv~r 324 (625)
...+ -.++..+..+ +++++.-+++.
T Consensus 103 ~~~~i~~l~~~~~~~~~~~~~~~~~~~ 129 (245)
T 1h7e_A 103 RPRDVETLLQGMRDDPALPVATLCHAI 129 (245)
T ss_dssp CHHHHHHHHHHHHHCTTCCEEEEEEEE
T ss_pred CHHHHHHHHHHHHhCCCCCEEEEeecC
Confidence 4322 2344455555 67766555543
No 22
>1mc3_A Glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylytransferase, RFFH; HET: TTP; 2.60A {Escherichia coli} SCOP: c.68.1.6
Probab=97.19 E-value=0.0018 Score=66.68 Aligned_cols=70 Identities=24% Similarity=0.302 Sum_probs=52.6
Q ss_pred eEEEEEcCCccccCC---ccCCcccCCCcCCCCcchHHHHHHHHHHHHHHhhhhccCCcccccEEEecCccchHHHHHHH
Q 006923 141 AAFVLVAGGLGERLG---YNGIKVALPAETTTGTCFLQNYIECILALQESSCRLAEGKCQEIPFAIMTSDDTHSRTQELL 217 (625)
Q Consensus 141 vavvlLaGGlGTRLG---~~~pK~~lpv~~~~~~s~lql~~~~i~~l~~~~~~~~~g~~~~iPl~IMTS~~T~~~T~~~l 217 (625)
+..|+||||.||||+ ...||.++|+. |++++++.++.+.. ++ .-.++|.|+....+...+++
T Consensus 4 m~aIILAgG~GtRl~plT~~~pK~llpi~---gkpli~~~l~~l~~----~g--------i~~I~vv~~~~~~~~i~~~l 68 (296)
T 1mc3_A 4 MKGIILAGGSGTRLHPITRGVSKQLLPIY---DKPMIYYPLSVLML----AG--------IREILIITTPEDKGYFQRLL 68 (296)
T ss_dssp CEEEEECCCCCGGGHHHHTTSCGGGSEET---TEETTHHHHHHHHH----TT--------CCEEEEEECTTTHHHHHHHH
T ss_pred cEEEEECCCCCCcCCcccCCCCceeeEEC---CeeHHHHHHHHHHh----CC--------CCcEEEEechhHHHHHHHHH
Confidence 467889999999998 57899999984 89999999988764 22 11356667666677788888
Q ss_pred HhCCCCCC
Q 006923 218 ESNSYFGM 225 (625)
Q Consensus 218 ~~~~~FGl 225 (625)
.+...||+
T Consensus 69 ~~g~~~g~ 76 (296)
T 1mc3_A 69 GDGSEFGI 76 (296)
T ss_dssp TTSGGGTC
T ss_pred hcccccCc
Confidence 76444554
No 23
>3tqd_A 3-deoxy-manno-octulosonate cytidylyltransferase; cell envelope; 1.80A {Coxiella burnetii} SCOP: c.68.1.0
Probab=97.18 E-value=0.0017 Score=65.63 Aligned_cols=188 Identities=14% Similarity=0.073 Sum_probs=103.3
Q ss_pred ceEEEEEcCCccccCCccCCcccCCCcCCCCcchHHHHHHHHHHHHHHhhhhccCCcccccEEEecCccchHHHHHHHHh
Q 006923 140 NAAFVLVAGGLGERLGYNGIKVALPAETTTGTCFLQNYIECILALQESSCRLAEGKCQEIPFAIMTSDDTHSRTQELLES 219 (625)
Q Consensus 140 kvavvlLaGGlGTRLG~~~pK~~lpv~~~~~~s~lql~~~~i~~l~~~~~~~~~g~~~~iPl~IMTS~~T~~~T~~~l~~ 219 (625)
++.+|+||||.||||+ +|.++|+ .|++++++.++++.+. + --.++|-|. ++.+.+++++
T Consensus 9 ~~~aIIlA~G~stRl~---~K~L~~i---~GkPli~~~l~~l~~~----~--------i~~VvVvt~---~~~i~~~~~~ 67 (256)
T 3tqd_A 9 EFRVIIPARFDSTRLP---GKALVDI---AGKPMIQHVYESAIKS----G--------AEEVVIATD---DKRIRQVAED 67 (256)
T ss_dssp CCEEEEECCCC---CT---TGGGCEE---TTEEHHHHHHHHHHHT----T--------CSEEEEEES---CHHHHHHHHH
T ss_pred CceEEEEcCCCCCCCC---CCCeeeE---CCchHHHHHHHHHHhC----C--------CCEEEEECC---HHHHHHHHHH
Confidence 6889999999999997 8999998 4999999999988642 1 112455563 5788888875
Q ss_pred CCCCCCCCCcEEEEEecceeEEecCCCceecCCCCCCccccccCCCchhhHHHhhcChHHHHHHcCceEEEEEeCCCccc
Q 006923 220 NSYFGMKPTQVKLLKQEKVACLDDNDARLAMDPKNKYRIQTKPHGHGDVHALLYSSGLLKEWHDAGLKWVLFFQDTNGLL 299 (625)
Q Consensus 220 ~~~FGl~~~~V~~F~Q~~~P~l~~~~g~~~l~~~~~~~i~~~P~GhGdi~~aL~~sGlL~~l~~~G~~yi~v~~vDN~L~ 299 (625)
||.. ++... . -.|.|-+.++.++.. +...+.+++.+.+-|++|.
T Consensus 68 ---~g~~-------------v~~~~--------~------~~~~Gt~~i~~a~~~------l~~~~~d~vlv~~gD~Pli 111 (256)
T 3tqd_A 68 ---FGAV-------------VCMTS--------S------DHQSGTERIAEAAVA------LGFEDDEIIVCLQGDEPLI 111 (256)
T ss_dssp ---TTCE-------------EEECC--------T------TCCSHHHHHHHHHHH------TTCCTTCEEEEECTTCCCC
T ss_pred ---cCCe-------------EEEeC--------C------CCCCcHHHHHHHHHH------hCcCCCCEEEEEeCCcccC
Confidence 3431 11100 0 134566666665532 2113578999999999876
Q ss_pred cccch-HHHHHHhhc-CCceeeeecc-CCccC-----ccceEEEEecCCCceeEEEEeccCccHHHHhcCCCCCCCCC-C
Q 006923 300 FKAIP-ASLGVSATK-QYHVNSLAVP-RKAKE-----AIGGITRLTHADGRSMVINVEYNQLDPLLRATGFPDGDVNC-E 370 (625)
Q Consensus 300 ~~~DP-~~lG~~~~~-~~~~~~kvv~-r~~~E-----~vG~i~~~~~~dG~~~v~nVEYsel~~~l~~~~~~~g~l~~-~ 370 (625)
...+. .++..+..+ ++++++-+++ +.+.+ .+++++ ..+|+. +.+++-+.- ..++....-.+ .
T Consensus 112 ~~~~i~~li~~~~~~~~~~~a~l~~~v~~~~~~~~p~~vkvv~---d~~g~~----l~fsr~pip--~~r~~~~~~~~~~ 182 (256)
T 3tqd_A 112 PPDAIRKLAEDLDEHDNVKVASLCTPITEVDELFNPHSTKVVL---NRRNYA----LYFSHAPIP--WGRDTFSDKENLQ 182 (256)
T ss_dssp CHHHHHHHHHHHHHCC--CEEEEEEECCCHHHHTCTTSCEEEE---CTTSBE----EEEESSCSS--CCTTTTTCGGGCC
T ss_pred CHHHHHHHHHHHHhCCCCCEEEEeeEcCCHHHhhCCCccEEEE---CCCCEE----eEEecCCCC--CCCcccccccccc
Confidence 43222 234444443 5677777765 22221 234433 456753 344443210 00000000000 0
Q ss_pred CCCCCCccceeeEEEehhhhHHHH
Q 006923 371 TGYSPFPGNINQLILELGPYMEEL 394 (625)
Q Consensus 371 ~gf~~f~gNinn~~~~l~~l~~~l 394 (625)
...+ +..|+....|+-+++.+..
T Consensus 183 ~~~~-~~~~~GiY~y~~~~l~~~~ 205 (256)
T 3tqd_A 183 LNGS-HYRHVGIYAYRVGFLEEYL 205 (256)
T ss_dssp CSSC-CEEEEEEEEEEHHHHHHHH
T ss_pred cCCc-ceEEEEEEEcCHHHHHHHH
Confidence 0112 2359999999998766654
No 24
>3pnn_A Conserved domain protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: MSE GOL; 1.90A {Porphyromonas gingivalis}
Probab=97.12 E-value=0.0079 Score=61.94 Aligned_cols=147 Identities=13% Similarity=0.077 Sum_probs=85.3
Q ss_pred ceEEEEEcCCccccCCccCCcccCCCcCCCCcchHHHHHHHHHHHHHHhhhhccCCcccccEEEecCccchHHHHHHHHh
Q 006923 140 NAAFVLVAGGLGERLGYNGIKVALPAETTTGTCFLQNYIECILALQESSCRLAEGKCQEIPFAIMTSDDTHSRTQELLES 219 (625)
Q Consensus 140 kvavvlLaGGlGTRLG~~~pK~~lpv~~~~~~s~lql~~~~i~~l~~~~~~~~~g~~~~iPl~IMTS~~T~~~T~~~l~~ 219 (625)
++.+|+||||.|||||- ||.++|++ ..|++++++.++.+... + .-.++|.|.....+.+.++|..
T Consensus 5 ~~~~vIlAaG~g~R~~~--~K~l~~ig-~~g~pli~~~l~~~~~~----~--------~~~i~vv~~~~~~~~~~~~~~~ 69 (303)
T 3pnn_A 5 KPTLFVLAAGMGSRYGS--LKQLDGIG-PGGDTIMDYSVYDAIRA----G--------FGRLVFVIRHSFEKEFREKILT 69 (303)
T ss_dssp CCEEEEECTTCBCTTSS--BCCCCCCS-TTSCCHHHHHHHHHHHH----T--------CCEEEEEECGGGHHHHHHHTHH
T ss_pred ceEEEEECCCCcccCCC--CceEeEcC-CCCeeHHHHHHHHHHHC----C--------CCeEEEEcCchHHHHHHHHHHH
Confidence 46789999999999985 89999983 14899999999987543 2 2246777776656888888876
Q ss_pred CCCCCCCCCcEEEEEecceeEEecCCCceecCCCCCCccccccCCCchhhHHHhhcChHHHHHHcCceEEEEEeCCCccc
Q 006923 220 NSYFGMKPTQVKLLKQEKVACLDDNDARLAMDPKNKYRIQTKPHGHGDVHALLYSSGLLKEWHDAGLKWVLFFQDTNGLL 299 (625)
Q Consensus 220 ~~~FGl~~~~V~~F~Q~~~P~l~~~~g~~~l~~~~~~~i~~~P~GhGdi~~aL~~sGlL~~l~~~G~~yi~v~~vDN~L~ 299 (625)
...++ .+|.+..|+..- + .....+.. . ...|-|.|+-...... .++ +.+.|.+-|+ +.
T Consensus 70 ~~~~~---~~i~~~~~~~~~-~-~~~~~~~~--~-----~~~~~Gt~~al~~a~~--~i~-------~~~lV~~gD~-l~ 127 (303)
T 3pnn_A 70 KYEGR---IPVELVFQELDR-L-PEGFSCPE--G-----REKPWGTNHAVLMGRD--AIR-------EPFAVINADD-FY 127 (303)
T ss_dssp HHTTT---SCEEEEECCTTC-C-CTTCCCCT--T-----CCSCCCHHHHHHTTTT--TCC-------SCEEEEESSC-BC
T ss_pred HhccC---CcEEEEeccccc-c-cccccccc--c-----ccccCCcHHHHHHHHH--hcC-------CCEEEEECCe-ec
Confidence 43333 246666665321 1 01111111 0 0235566554333221 221 3345666777 33
Q ss_pred cc-cchHHHHHHhh---cCCceeeeecc
Q 006923 300 FK-AIPASLGVSAT---KQYHVNSLAVP 323 (625)
Q Consensus 300 ~~-~DP~~lG~~~~---~~~~~~~kvv~ 323 (625)
.. .--.++-++.+ .+.++++-+.+
T Consensus 128 ~~~~~~~l~~~~~~~~~~~~~~~v~~~~ 155 (303)
T 3pnn_A 128 GRNGFEVLARKLMTLEGKQGEYCMVGYR 155 (303)
T ss_dssp CHHHHHHHHHHHHTTTTCSSEEEEEEEE
T ss_pred CHHHHHHHHHHHHHhccccCceEEEEEE
Confidence 21 11225666654 46677666554
No 25
>2v0h_A Bifunctional protein GLMU; cell WALL, magnesium, cell shape, transferase, peptidoglycan synthesis, associative mechanism; 1.79A {Haemophilus influenzae} PDB: 2v0i_A* 2v0j_A* 2v0k_A* 2v0l_A* 2vd4_A* 2w0v_A* 2w0w_A* 3twd_A*
Probab=97.04 E-value=0.008 Score=64.62 Aligned_cols=64 Identities=17% Similarity=0.182 Sum_probs=48.8
Q ss_pred ceEEEEEcCCccccCCccCCcccCCCcCCCCcchHHHHHHHHHHHHHHhhhhccCCcccccEEEecCccchHHHHHHHHh
Q 006923 140 NAAFVLVAGGLGERLGYNGIKVALPAETTTGTCFLQNYIECILALQESSCRLAEGKCQEIPFAIMTSDDTHSRTQELLES 219 (625)
Q Consensus 140 kvavvlLaGGlGTRLG~~~pK~~lpv~~~~~~s~lql~~~~i~~l~~~~~~~~~g~~~~iPl~IMTS~~T~~~T~~~l~~ 219 (625)
++.+|+||||.||||+.+.||.++|+. |++++++.++++... + .-.++|.|+.. .+.+.+++.+
T Consensus 5 ~~~aiIlA~G~g~Rl~~~~pK~l~~i~---gkpli~~~l~~l~~~----~--------~~~iivv~~~~-~~~i~~~~~~ 68 (456)
T 2v0h_A 5 ALSAVILAAGKGTRMYSDLPKVLHTIA---GKPMVKHVIDTAHQL----G--------SENIHLIYGHG-GDLMRTHLAN 68 (456)
T ss_dssp CEEEEEECCCCCGGGCSSSCGGGSEET---TEEHHHHHHHHHHHT----T--------CSCEEEEECTT-HHHHHHHTTT
T ss_pred cceEEEECCCCCcccCCCCCccccEEC---CccHHHHHHHHHHhC----C--------CCcEEEEeCCC-HHHHHHHhhc
Confidence 578899999999999977899999984 999999999988653 1 11356666653 4666666654
No 26
>1hm9_A GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltransfe; acetyltransferase, bifunctional, drug design; HET: ACO UD1; 1.75A {Streptococcus pneumoniae} SCOP: b.81.1.4 c.68.1.5 PDB: 1hm8_A* 1hm0_A* 4ac3_A* 4aaw_A* 1g97_A* 1g95_A*
Probab=96.96 E-value=0.005 Score=66.64 Aligned_cols=180 Identities=14% Similarity=0.124 Sum_probs=101.0
Q ss_pred EEEEEcCCccccCCccCCcccCCCcCCCCcchHHHHHHHHHHHHHHhhhhccCCcccccEEEecCccchHHHHHHHHhCC
Q 006923 142 AFVLVAGGLGERLGYNGIKVALPAETTTGTCFLQNYIECILALQESSCRLAEGKCQEIPFAIMTSDDTHSRTQELLESNS 221 (625)
Q Consensus 142 avvlLaGGlGTRLG~~~pK~~lpv~~~~~~s~lql~~~~i~~l~~~~~~~~~g~~~~iPl~IMTS~~T~~~T~~~l~~~~ 221 (625)
-+|+||||.||||+.+.||.++|+. |++++++.++++.+. + --.++|.|+.. .+.+.+++.+
T Consensus 13 ~~vIlAaG~g~R~~~~~pK~l~~i~---gkpli~~~l~~l~~~----g--------~~~iivv~~~~-~~~i~~~~~~-- 74 (468)
T 1hm9_A 13 FAIILAAGKGTRMKSDLPKVLHKVA---GISMLEHVFRSVGAI----Q--------PEKTVTVVGHK-AELVEEVLAG-- 74 (468)
T ss_dssp EEEEECCCCCGGGCCSSCGGGSEET---TEEHHHHHHHHHHTT----C--------CSEEEEEECTT-HHHHHHSSSS--
T ss_pred cEEEEcCCCCccCCCCCCcEeeEEC---CccHHHHHHHHHHhc----C--------CCCEEEEECCC-HHHHHHHhCC--
Confidence 4688999999999977899999984 999999999887542 1 12456666554 4444444332
Q ss_pred CCCCCCCcEEEEEecceeEEecCCCceecCCCCCCccccccCCCch-hhHHHhhcChHHHHHHcCceEEEEEeCCCcccc
Q 006923 222 YFGMKPTQVKLLKQEKVACLDDNDARLAMDPKNKYRIQTKPHGHGD-VHALLYSSGLLKEWHDAGLKWVLFFQDTNGLLF 300 (625)
Q Consensus 222 ~FGl~~~~V~~F~Q~~~P~l~~~~g~~~l~~~~~~~i~~~P~GhGd-i~~aL~~sGlL~~l~~~G~~yi~v~~vDN~L~~ 300 (625)
.+. .+ . +. .+.|-++ ++.++ +.+ ...-+++.+.+.|.+|..
T Consensus 75 -------~i~--------~v--------~--~~------~~~G~~~sl~~a~------~~~-~~~~~~vlv~~~D~P~i~ 116 (468)
T 1hm9_A 75 -------QTE--------FV--------T--QS------EQLGTGHAVMMTE------PIL-EGLSGHTLVIAGDTPLIT 116 (468)
T ss_dssp -------SSE--------EE--------E--CS------SCCCHHHHHHTTH------HHH-TTCCSEEEEEETTCTTCC
T ss_pred -------CcE--------EE--------e--CC------ccCChHHHHHHHH------HHh-ccCCCeEEEEeCCccccC
Confidence 111 11 1 00 1223332 23232 323 222478999999998655
Q ss_pred ccch-HHHHHHhhcCCceeeeeccCCccCccceEEEEecCCCceeEEEEeccCccHHHHhcCCCCCCCCCCCCCCCCccc
Q 006923 301 KAIP-ASLGVSATKQYHVNSLAVPRKAKEAIGGITRLTHADGRSMVINVEYNQLDPLLRATGFPDGDVNCETGYSPFPGN 379 (625)
Q Consensus 301 ~~DP-~~lG~~~~~~~~~~~kvv~r~~~E~vG~i~~~~~~dG~~~v~nVEYsel~~~l~~~~~~~g~l~~~~gf~~f~gN 379 (625)
..+. .++-.+.+.++++.+-+.+.......|.+.. ..+|+. +++.+-+. ..+ +.. ..+..|
T Consensus 117 ~~~i~~l~~~~~~~~~~~~i~~~~~~~~~~~g~v~~--d~~g~v----~~~~ek~~-----~~~--~~~-----~~~~~~ 178 (468)
T 1hm9_A 117 GESLKNLIDFHINHKNVATILTAETDNPFGYGRIVR--NDNAEV----LRIVEQKD-----ATD--FEK-----QIKEIN 178 (468)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEEEECSCCTTSCEEEE--CTTCCE----EEEECTTT-----CCT--TGG-----GCCEEE
T ss_pred HHHHHHHHHHHHhcCCcEEEEEeccCCCCceeEEEE--CCCCCE----EEEEECCC-----CCh--HHh-----cCeEEE
Confidence 4322 3455666677777766665433334565432 334542 33333221 000 000 012348
Q ss_pred eeeEEEehhhhHHHHh
Q 006923 380 INQLILELGPYMEELK 395 (625)
Q Consensus 380 inn~~~~l~~l~~~l~ 395 (625)
+...+|+-+.+.+.+.
T Consensus 179 ~Giy~f~~~~l~~~l~ 194 (468)
T 1hm9_A 179 TGTYVFDNERLFEALK 194 (468)
T ss_dssp EEEEEEEHHHHHHHHT
T ss_pred EEEEEEEHHHHHHHHH
Confidence 8889999887766664
No 27
>2xwl_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; transferase, MEP pathway; HET: CTP; 1.49A {Mycobacterium smegmatis} PDB: 2xwm_A*
Probab=96.96 E-value=0.001 Score=64.48 Aligned_cols=64 Identities=20% Similarity=0.174 Sum_probs=46.6
Q ss_pred ceEEEEEcCCccccCCccCCcccCCCcCCCCcchHHHHHHHHHHHHHHhhhhccCCcccccEEEecCccchHHHHHHH
Q 006923 140 NAAFVLVAGGLGERLGYNGIKVALPAETTTGTCFLQNYIECILALQESSCRLAEGKCQEIPFAIMTSDDTHSRTQELL 217 (625)
Q Consensus 140 kvavvlLaGGlGTRLG~~~pK~~lpv~~~~~~s~lql~~~~i~~l~~~~~~~~~g~~~~iPl~IMTS~~T~~~T~~~l 217 (625)
++.+|+||||.|||||...||.++|+. |++++++.++++.+. + ..-.++|.|+..-.+...+++
T Consensus 2 ~~~~vIlA~G~g~R~~~~~~K~l~~~~---g~pli~~~l~~l~~~----~-------~~~~i~vv~~~~~~~~~~~~~ 65 (223)
T 2xwl_A 2 ATVAVVPAAGSGERLRAGRPKAFVTLG---GTPLLEHALSGLRAS----G-------VIDRIVIAVPPALTDESKLVF 65 (223)
T ss_dssp CEEEEEECCCCCGGGTSSSCGGGSEET---TEEHHHHHHHHHHHH----S-------CCSEEEEEECGGGHHHHHHHT
T ss_pred ceEEEEECCccCcccCCCCCCeeeEEC---CeEHHHHHHHHHhcC----C-------CCCeEEEEEcccHHHHHHHHh
Confidence 467899999999999977899999984 999999999988653 1 012456666654434444443
No 28
>1vic_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics; 1.80A {Haemophilus influenzae} SCOP: c.68.1.13 PDB: 1vh3_A 3duv_A*
Probab=96.93 E-value=0.0029 Score=63.36 Aligned_cols=128 Identities=16% Similarity=0.108 Sum_probs=78.2
Q ss_pred ceEEEEEcCCccccCCccCCcccCCCcCCCCcchHHHHHHHHHHHHHHhhhhccCCcccccEEEecCccchHHHHHHHHh
Q 006923 140 NAAFVLVAGGLGERLGYNGIKVALPAETTTGTCFLQNYIECILALQESSCRLAEGKCQEIPFAIMTSDDTHSRTQELLES 219 (625)
Q Consensus 140 kvavvlLaGGlGTRLG~~~pK~~lpv~~~~~~s~lql~~~~i~~l~~~~~~~~~g~~~~iPl~IMTS~~T~~~T~~~l~~ 219 (625)
++.+|+||||.||||| +|.++|+. |++++++.++++... + .-.++|.|.. +.+.+++++
T Consensus 2 ~~~aiIlA~G~g~R~~---~K~l~~~~---gkpli~~~l~~l~~~----~--------~~~ivvv~~~---~~i~~~~~~ 60 (262)
T 1vic_A 2 SFTVIIPARFASSRLP---GKPLADIK---GKPMIQHVFEKALQS----G--------ASRVIIATDN---ENVADVAKS 60 (262)
T ss_dssp CCEEEEECCCCCSSST---TGGGCEET---TEEHHHHHHHHHHHT----T--------CSEEEEEESC---HHHHHHHHH
T ss_pred CcEEEEEcCCCCCCCC---CCccccCC---CeEHHHHHHHHHHhC----C--------CceEEEECCc---HHHHHHHHh
Confidence 4678999999999997 59999984 999999999888653 1 1245666653 567777765
Q ss_pred CCCCCCCCCcEEEEEecceeEEecCCCceecCCCCCCccccccCCCchhhHHHhhcChHHHHHHcCceEEEEEeCCCccc
Q 006923 220 NSYFGMKPTQVKLLKQEKVACLDDNDARLAMDPKNKYRIQTKPHGHGDVHALLYSSGLLKEWHDAGLKWVLFFQDTNGLL 299 (625)
Q Consensus 220 ~~~FGl~~~~V~~F~Q~~~P~l~~~~g~~~l~~~~~~~i~~~P~GhGdi~~aL~~sGlL~~l~~~G~~yi~v~~vDN~L~ 299 (625)
+ |. . ++... + ..|.|-|.+..+ ++.+...+-+++.+.+.|.++.
T Consensus 61 ~---~~-----~--------~~~~~--------~------~~~~g~~~~~~~------~~~l~~~~~~~vlv~~~D~P~i 104 (262)
T 1vic_A 61 F---GA-----E--------VCMTS--------V------NHNSGTERLAEV------VEKLAIPDNEIIVNIQGDEPLI 104 (262)
T ss_dssp T---TC-----E--------EEECC--------C------SSCCHHHHHHHH------HHHTTCCTTCEEEECCTTCTTC
T ss_pred c---CC-----E--------EEECC--------c------cccCChHHHHHH------HHHhccCCCCEEEEEeCCcCcc
Confidence 2 31 1 11100 0 113344432222 2222223568899999999875
Q ss_pred cccc-hHHHHHHhhcCCceeeeeccC
Q 006923 300 FKAI-PASLGVSATKQYHVNSLAVPR 324 (625)
Q Consensus 300 ~~~D-P~~lG~~~~~~~~~~~kvv~r 324 (625)
...+ -.++..+...+++++.-+++.
T Consensus 105 ~~~~i~~l~~~~~~~~~~~~~~~~~~ 130 (262)
T 1vic_A 105 PPVIVRQVADNLAKFNVNMASLAVKI 130 (262)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEEEEC
T ss_pred CHHHHHHHHHHHHhcCCCEEEEEEec
Confidence 5332 234555556677776666663
No 29
>1qwj_A Cytidine monophospho-N-acetylneuraminic acid synthetase; CMP-5-N-acetylneuraminic acid synthetase, CMP-NEU5AC, sialic acid, glycosylation; HET: NCC; 2.80A {Mus musculus} SCOP: c.68.1.13
Probab=96.92 E-value=0.0059 Score=59.88 Aligned_cols=129 Identities=12% Similarity=0.074 Sum_probs=77.7
Q ss_pred ceEEEEEcCCccccCCccCCcccCCCcCCCCcchHHHHHHHHHHHHHHhhhhccCCcccccEEEecCccchHHHHHHHHh
Q 006923 140 NAAFVLVAGGLGERLGYNGIKVALPAETTTGTCFLQNYIECILALQESSCRLAEGKCQEIPFAIMTSDDTHSRTQELLES 219 (625)
Q Consensus 140 kvavvlLaGGlGTRLG~~~pK~~lpv~~~~~~s~lql~~~~i~~l~~~~~~~~~g~~~~iPl~IMTS~~T~~~T~~~l~~ 219 (625)
++++|+||||.||||+ +|.++|+ .|++++++.++++.+. + .--.++|-| .++.+.+++++
T Consensus 3 ~~~aiIlA~G~s~R~~---~K~l~~i---~Gkpli~~~i~~~~~~----~-------~~~~ivv~~---~~~~i~~~~~~ 62 (229)
T 1qwj_A 3 HLAALVLARGGSKGIP---LKNIKRL---AGVPLIGWVLRAALDA----G-------VFQSVWVST---DHDEIENVAKQ 62 (229)
T ss_dssp CEEEEEECCSCCSSSS---CTTTSEE---TTEEHHHHHHHHHHHH----T-------CCSEEEEEE---SCHHHHHHHHH
T ss_pred cEEEEEEcCCCCCCCC---CcccceE---CCEEHHHHHHHHHHhC----C-------CcCEEEEEC---ChHHHHHHHHH
Confidence 5788999999999996 5999998 4999999999988654 1 012355555 35677888775
Q ss_pred CCCCCCCCCcEEEEEecceeEEecCCCceecCCCCCCccccccCCCchhhHHHhhcChHHHHHHcCceEEEEEeCCCccc
Q 006923 220 NSYFGMKPTQVKLLKQEKVACLDDNDARLAMDPKNKYRIQTKPHGHGDVHALLYSSGLLKEWHDAGLKWVLFFQDTNGLL 299 (625)
Q Consensus 220 ~~~FGl~~~~V~~F~Q~~~P~l~~~~g~~~l~~~~~~~i~~~P~GhGdi~~aL~~sGlL~~l~~~G~~yi~v~~vDN~L~ 299 (625)
+ |. .++.+ ...+.. ..+.|.+.+..+|.. + .+.+++.+.+.|++|.
T Consensus 63 ~---g~-----~~~~~---------~~~~~~---------~~~~~~~~v~~al~~------~--~~~d~vlv~~~D~Pli 108 (229)
T 1qwj_A 63 F---GA-----QVHRR---------SSETSK---------DSSTSLDAIVEFLNY------H--NEVDIVGNIQATSPCL 108 (229)
T ss_dssp T---TC-----EEEEC---------CGGGSS---------TTCCHHHHHHHHHTT------C--TTCSEEEEECTTCTTC
T ss_pred c---CC-----EEEeC---------hhhhcC---------CCCcHHHHHHHHHHh------c--CCCCEEEEecCCCCcC
Confidence 3 32 11111 100000 112233344555432 1 2468899999999876
Q ss_pred cccch-HHHHHHhhcCCceeeeec
Q 006923 300 FKAIP-ASLGVSATKQYHVNSLAV 322 (625)
Q Consensus 300 ~~~DP-~~lG~~~~~~~~~~~kvv 322 (625)
...+. .++..+...++++.+-++
T Consensus 109 ~~~~i~~l~~~~~~~~~~~~~~~~ 132 (229)
T 1qwj_A 109 HPTDLQKVAEMIREEGYDSVFSVV 132 (229)
T ss_dssp CHHHHHHHHHHHHSSCCSEEEEEE
T ss_pred CHHHHHHHHHHHHhCCCCEEEEEe
Confidence 53222 345555556666555444
No 30
>3q80_A 2-C-methyl-D-erythritol 4-phosphate cytidyltransf; TB structural genomics consortium, TBSGC, rossman fold; HET: CDM; 2.00A {Mycobacterium tuberculosis} SCOP: c.68.1.0 PDB: 3q7u_A* 3okr_A 2xwn_A*
Probab=96.90 E-value=0.0013 Score=65.52 Aligned_cols=65 Identities=17% Similarity=0.254 Sum_probs=50.0
Q ss_pred ceEEEEEcCCccccCCccCCcccCCCcCCCCcchHHHHHHHHHHHHHHhhhhccCCcccccEEEecCccchHHHHHHHH
Q 006923 140 NAAFVLVAGGLGERLGYNGIKVALPAETTTGTCFLQNYIECILALQESSCRLAEGKCQEIPFAIMTSDDTHSRTQELLE 218 (625)
Q Consensus 140 kvavvlLaGGlGTRLG~~~pK~~lpv~~~~~~s~lql~~~~i~~l~~~~~~~~~g~~~~iPl~IMTS~~T~~~T~~~l~ 218 (625)
++++|+||||.|||||.+.||.++|+ .|++++++.++.+.+. . ..-.++|.|+....+...+++.
T Consensus 7 ~~~aIIlAaG~g~Rmg~~~~K~l~~l---~Gkpll~~~l~~~~~~----~-------~~~~ivVv~~~~~~~~~~~~~~ 71 (231)
T 3q80_A 7 EVVAIVPAAGSGERLAVGVPKAFYQL---DGQTLIERAVDGLLDS----G-------VVDTVVVAVPADRTDEARQILG 71 (231)
T ss_dssp CEEEEEECCCCCTTTCSSSCGGGCEE---TTEEHHHHHHHHHHHT----S-------CCCEEEEEECGGGHHHHHHHHG
T ss_pred ceEEEEECCCCCccCCCCCCceEEEE---CCeEHHHHHHHHHHhC----C-------CCCeEEEECChHHHHHHHHHhc
Confidence 68899999999999998889999998 4999999999987543 0 0124667777665566666554
No 31
>2wee_A MOBA-related protein; unknown function; 1.65A {Mycobacterium tuberculosis H37RV} PDB: 2we9_A 2yes_A
Probab=96.90 E-value=0.00078 Score=63.88 Aligned_cols=61 Identities=20% Similarity=0.180 Sum_probs=45.1
Q ss_pred ceEEEEEcCCccccCCccCCcccCCCcCCCCcchHHHHHHHHHHHHHHhhhhccCCcccccEEEecCccchHHHHHHHH
Q 006923 140 NAAFVLVAGGLGERLGYNGIKVALPAETTTGTCFLQNYIECILALQESSCRLAEGKCQEIPFAIMTSDDTHSRTQELLE 218 (625)
Q Consensus 140 kvavvlLaGGlGTRLG~~~pK~~lpv~~~~~~s~lql~~~~i~~l~~~~~~~~~g~~~~iPl~IMTS~~T~~~T~~~l~ 218 (625)
++.+|+||||.||||| .||.++|+ .|+++++..++++... + .-.++|.|+.. .+.+.+++.
T Consensus 5 ~~~~iIlA~G~~~R~g--~~K~l~~~---~g~pll~~~l~~l~~~----~--------~~~i~vv~~~~-~~~~~~~~~ 65 (197)
T 2wee_A 5 QITGVVLAAGRSNRLG--TPKQLLPY---RDTTVLGATLDVARQA----G--------FDQLILTLGGA-ASAVRAAMA 65 (197)
T ss_dssp EEEEEEEECCCCTTTS--SCGGGSEE---TTEEHHHHHHHHHHHT----T--------CSEEEEEECTT-HHHHHHHSC
T ss_pred ceEEEEECCCCcccCC--CCeEcCee---CCccHHHHHHHHHHhc----C--------CCcEEEEeCCC-HHHHHHHhc
Confidence 5778999999999997 79999998 4999999999888653 1 11456666554 455555543
No 32
>2waw_A MOBA relate protein; unknown function; HET: PGE; 1.60A {Mycobacterium SP}
Probab=96.86 E-value=0.00073 Score=64.08 Aligned_cols=61 Identities=21% Similarity=0.199 Sum_probs=44.9
Q ss_pred ceEEEEEcCCccccCCccCCcccCCCcCCCCcchHHHHHHHHHHHHHHhhhhccCCcccccEEEecCccchHHHHHHHH
Q 006923 140 NAAFVLVAGGLGERLGYNGIKVALPAETTTGTCFLQNYIECILALQESSCRLAEGKCQEIPFAIMTSDDTHSRTQELLE 218 (625)
Q Consensus 140 kvavvlLaGGlGTRLG~~~pK~~lpv~~~~~~s~lql~~~~i~~l~~~~~~~~~g~~~~iPl~IMTS~~T~~~T~~~l~ 218 (625)
++.+|+||||.||||| .||.++|+ .|+++++..++++.... .-.++|.|+.. ++.+.++++
T Consensus 5 ~~~~iIlA~G~~~R~g--~~K~l~~~---~g~pli~~~l~~l~~~~------------~~~i~vv~~~~-~~~~~~~~~ 65 (199)
T 2waw_A 5 RVTGVVLAAGYSRRLG--TPKQLLPL---GDTTLLGATLAMARRCP------------FDQLIVTLGGA-ADEVLEKVE 65 (199)
T ss_dssp CEEEEEEESSCCTTTT--SCGGGCEE---TTEEHHHHHHHHHHTSS------------CSEEEEEECTT-HHHHHHHSC
T ss_pred ceEEEEECCCCCCCCC--CCEEeCEe---CccCHHHHHHHHHHhCC------------CCcEEEEeCCC-HHHHHHHhc
Confidence 5788999999999998 79999998 48999999988875420 12456666543 345555543
No 33
>3f1c_A Putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2; structural genomics, PSI-2, protein structure initiative; 2.30A {Listeria monocytogenes str} SCOP: c.68.1.0
Probab=96.78 E-value=0.0012 Score=65.79 Aligned_cols=68 Identities=18% Similarity=0.203 Sum_probs=45.3
Q ss_pred ceEEEEEcCCccccCCc-cCCcccCCCcCCCCcchHHHHHHHHHHHHHHhhhhccCCcccccEEEecCccchHHHHHHHH
Q 006923 140 NAAFVLVAGGLGERLGY-NGIKVALPAETTTGTCFLQNYIECILALQESSCRLAEGKCQEIPFAIMTSDDTHSRTQELLE 218 (625)
Q Consensus 140 kvavvlLaGGlGTRLG~-~~pK~~lpv~~~~~~s~lql~~~~i~~l~~~~~~~~~g~~~~iPl~IMTS~~T~~~T~~~l~ 218 (625)
++.+|+||||.|||||. +.||.++|+ .|++++++.++.+.+. + ..-.++|.|+..-.+...+.++
T Consensus 3 ~~~aIIlAaG~g~Rm~~~~~pK~l~~l---~Gkpll~~~l~~~~~~----~-------~~~~ivvv~~~~~~~~~~~~~~ 68 (246)
T 3f1c_A 3 LIYAQILAGGKGTRMGNVSMPKQFLPL---NGKPIIVHTVEKFILN----T-------RFDKILISSPKEWMNHAEDNIK 68 (246)
T ss_dssp CEEEEEECC-----C-CSSCCGGGSEE---TTEEHHHHHHHHHHTC----T-------TCSEEEEEECGGGHHHHHHHHH
T ss_pred ccEEEEECCccccccCCCCCCCeEEEE---CCeeHHHHHHHHHHcC----C-------CCCEEEEEeCHHHHHHHHHHHH
Confidence 56889999999999998 779999998 4999999999887532 0 0224667777665555677777
Q ss_pred hCC
Q 006923 219 SNS 221 (625)
Q Consensus 219 ~~~ 221 (625)
++.
T Consensus 69 ~~~ 71 (246)
T 3f1c_A 69 KYI 71 (246)
T ss_dssp HHC
T ss_pred HhC
Confidence 643
No 34
>1ezi_A CMP-N-acetylneuraminic acid synthetase; homodimer, alpha-beta-alpha, transferase; 2.00A {Neisseria meningitidis} SCOP: c.68.1.13 PDB: 1eyr_A
Probab=96.69 E-value=0.0024 Score=62.41 Aligned_cols=60 Identities=15% Similarity=0.065 Sum_probs=45.8
Q ss_pred ceEEEEEcCCccccCCccCCcccCCCcCCCCcchHHHHHHHHHHHHHHhhhhccCCcccccEEEecCccchHHHHHHHHh
Q 006923 140 NAAFVLVAGGLGERLGYNGIKVALPAETTTGTCFLQNYIECILALQESSCRLAEGKCQEIPFAIMTSDDTHSRTQELLES 219 (625)
Q Consensus 140 kvavvlLaGGlGTRLG~~~pK~~lpv~~~~~~s~lql~~~~i~~l~~~~~~~~~g~~~~iPl~IMTS~~T~~~T~~~l~~ 219 (625)
++.+|+||||.||||| ||.++|+. |++++++.++++.+. + ..-.++|.|. ++.+.+++++
T Consensus 4 ~~~aiIlA~G~g~R~~---~K~l~~i~---gkpll~~~l~~~~~~----~-------~~~~ivvv~~---~~~i~~~~~~ 63 (228)
T 1ezi_A 4 QNIAVILARQNSKGLP---LKNLRKMN---GISLLGHTINAAISS----K-------CFDRIIVSTD---GGLIAEEAKN 63 (228)
T ss_dssp EEEEEEECCSSCSSST---TTTTCEET---TEEHHHHHHHHHHHH----C-------CCSEEEEEES---CHHHHHHHHH
T ss_pred ceEEEEecCCCCCCCC---CcccceeC---CcCHHHHHHHHHHhC----C-------CCCEEEEECC---CHHHHHHHHH
Confidence 4778999999999999 99999984 999999999988653 1 0124566664 4566777765
No 35
>3juk_A UDP-glucose pyrophosphorylase (GALU); transfer; HET: UPG; 2.30A {Helicobacter pylori} PDB: 3juj_A*
Probab=96.68 E-value=0.003 Score=63.82 Aligned_cols=64 Identities=19% Similarity=0.198 Sum_probs=49.6
Q ss_pred eEEEEEcCCccccCCc---cCCcccCCCcCCCCcchHHHHHHHHHHHHHHhhhhccCCcccccEEEecCccchHHHHHHH
Q 006923 141 AAFVLVAGGLGERLGY---NGIKVALPAETTTGTCFLQNYIECILALQESSCRLAEGKCQEIPFAIMTSDDTHSRTQELL 217 (625)
Q Consensus 141 vavvlLaGGlGTRLG~---~~pK~~lpv~~~~~~s~lql~~~~i~~l~~~~~~~~~g~~~~iPl~IMTS~~T~~~T~~~l 217 (625)
+.+|+||||.||||+- ..||.++|+. |++++++.++++... + .-.++|.|+ ...+.+.++|
T Consensus 3 ~~avIlAaG~gtRl~plt~~~pK~ll~i~---gkpli~~~l~~l~~~----g--------i~~i~vv~~-~~~~~i~~~~ 66 (281)
T 3juk_A 3 KKCLFPAAGYGTRFLPITKTIPKEMLPIV---DKPLIQYAVEEAMEA----G--------CEVMAIVTG-RNKRSLEDYF 66 (281)
T ss_dssp CEEEEECCSCCGGGTTGGGTSCGGGCBSS---SSBHHHHHHHHHHHH----T--------CCEEEEEEC-TTHHHHHHHT
T ss_pred eEEEEECCcCCcccCccccCCCcccceEC---CEEHHHHHHHHHHhC----C--------CCEEEEEec-CCHHHHHHHH
Confidence 4578999999999986 8899999985 899999999998653 2 123556665 4567888888
Q ss_pred HhC
Q 006923 218 ESN 220 (625)
Q Consensus 218 ~~~ 220 (625)
.+.
T Consensus 67 ~~~ 69 (281)
T 3juk_A 67 DTS 69 (281)
T ss_dssp SCC
T ss_pred hcc
Confidence 764
No 36
>1tzf_A Glucose-1-phosphate cytidylyltransferase; nucleotidyltransferase, mixed alpha/beta fold; HET: C5G; 2.10A {Salmonella enterica subsp} SCOP: c.68.1.13 PDB: 1wvc_A*
Probab=96.67 E-value=0.0018 Score=64.31 Aligned_cols=158 Identities=16% Similarity=0.123 Sum_probs=83.0
Q ss_pred eEEEEEcCCccccCCc---cCCcccCCCcCCCCcchHHHHHHHHHHHHHHhhhhccCCcccccEEEecCccchHHHHHHH
Q 006923 141 AAFVLVAGGLGERLGY---NGIKVALPAETTTGTCFLQNYIECILALQESSCRLAEGKCQEIPFAIMTSDDTHSRTQELL 217 (625)
Q Consensus 141 vavvlLaGGlGTRLG~---~~pK~~lpv~~~~~~s~lql~~~~i~~l~~~~~~~~~g~~~~iPl~IMTS~~T~~~T~~~l 217 (625)
+.+|+||||.||||+- +.||.++|+. |++++++.++++.+. + .-.++|.|+.. ++.+.+++
T Consensus 3 ~~avIlAaG~gtRl~~lt~~~pK~l~~i~---gkpli~~~l~~l~~~----g--------~~~i~vv~~~~-~~~i~~~~ 66 (259)
T 1tzf_A 3 SKAVILAGGLGTRLSEETIVKPKPMVEIG---GKPILWHIMKMYSVH----G--------IKDFIICCGYK-GYVIKEYF 66 (259)
T ss_dssp CEEEEEECSCC--------CCCGGGCEET---TEEHHHHHHHHHHHT----T--------CCEEEEEECTT-HHHHHHHH
T ss_pred cEEEEECCCCcccCCCccCCCCccccEEC---CEEHHHHHHHHHHHC----C--------CCEEEEEcccC-HHHHHHHH
Confidence 4678899999999985 6799999984 999999998887653 1 12467777654 47888888
Q ss_pred HhCCCCCCCCCcEEEEEecceeEEecCCCceecCCCCCCcc----ccccCCCchhhHHHhhcChHHHHHHcCceEEEEEe
Q 006923 218 ESNSYFGMKPTQVKLLKQEKVACLDDNDARLAMDPKNKYRI----QTKPHGHGDVHALLYSSGLLKEWHDAGLKWVLFFQ 293 (625)
Q Consensus 218 ~~~~~FGl~~~~V~~F~Q~~~P~l~~~~g~~~l~~~~~~~i----~~~P~GhGdi~~aL~~sGlL~~l~~~G~~yi~v~~ 293 (625)
.++..++ .++.+..|+.--.+. ... ..++.+ .-.+-|.|+....... .++ +-+++.+.+
T Consensus 67 ~~~~~~~---~~~~~~~~~~~~~~~--~~~-----~~~~~v~~~~~~~~~gt~~al~~a~~--~~~-----~~~~~lv~~ 129 (259)
T 1tzf_A 67 ANYFLHM---SDVTFHMAENRMEVH--HKR-----VEPWNVTLVDTGDSSMTGGRLKRVAE--YVK-----DDEAFLFTY 129 (259)
T ss_dssp HTHHHHH---SCEEEEGGGTEEEET--TCC-----CCCCEEEEEECCSSCCHHHHHHHTGG--GTT-----TSSCEEEEE
T ss_pred hhccccc---ccccccccccceeee--ecc-----ccccceeeeecccccCcHHHHHHHHH--hcC-----CCCcEEEEE
Confidence 7642110 123333332200010 000 011111 1135566654433221 121 236777888
Q ss_pred CCCccccccchHHHHHHhhcCCceeeeeccCCccCccceEE
Q 006923 294 DTNGLLFKAIPASLGVSATKQYHVNSLAVPRKAKEAIGGIT 334 (625)
Q Consensus 294 vDN~L~~~~DP~~lG~~~~~~~~~~~kvv~r~~~E~vG~i~ 334 (625)
-|+ +....--.++..+..+++++.+..+. +....|.+.
T Consensus 130 ~D~-~~~~~~~~~~~~~~~~~~~~t~~~~~--~~~~~g~v~ 167 (259)
T 1tzf_A 130 GDG-VADLDIKATIDFHKAHGKKATLTATF--PPGRFGALD 167 (259)
T ss_dssp TTE-EECCCHHHHHHHHHHHCCSEEEEEEC--CCCCSEEEE
T ss_pred CCE-ecccCHHHHHHHHHHhCCeEEEEEec--CCCCccEEE
Confidence 888 33322234566666667766543322 334456544
No 37
>2yc3_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran chloroplastic; transferase, non-mevalonate-pathway, herbicide, allosteric P; HET: MW5; 1.40A {Arabidopsis thaliana} PDB: 2yc5_A* 1w77_A* 2ycm_A*
Probab=96.66 E-value=0.00093 Score=65.16 Aligned_cols=41 Identities=22% Similarity=0.271 Sum_probs=30.1
Q ss_pred ceEEEEEcCCccccCCccCCcccCCCcCCCCcchHHHHHHHHHH
Q 006923 140 NAAFVLVAGGLGERLGYNGIKVALPAETTTGTCFLQNYIECILA 183 (625)
Q Consensus 140 kvavvlLaGGlGTRLG~~~pK~~lpv~~~~~~s~lql~~~~i~~ 183 (625)
++.+|+||||.|||||.+.||.++|+. |++++++.++++.+
T Consensus 4 ~~~aiIlAaG~g~R~~~~~~K~l~~i~---g~pli~~~l~~l~~ 44 (228)
T 2yc3_A 4 SVSVILLAGGQGKRMKMSMPKQYIPLL---GQPIALYSFFTFSR 44 (228)
T ss_dssp CEEEEEECCCCC-------CGGGSEET---TEEHHHHHHHHHHH
T ss_pred ceEEEEECCccccccCCCCCccEeEEC---CEEHHHHHHHHHHc
Confidence 578899999999999977899999984 99999999888754
No 38
>1i52_A 4-diphosphocytidyl-2-C-methylerythritol synthase; cytidylyltransferase, deoxyxylulose-5-phosphate pathway (DXP isoprenoid biosynthesys, MEP; HET: CTP; 1.50A {Escherichia coli} SCOP: c.68.1.13 PDB: 1ini_A* 1inj_A 1vgt_A 1vgu_A 3n9w_A 1h3m_A
Probab=96.61 E-value=0.0011 Score=65.03 Aligned_cols=41 Identities=24% Similarity=0.365 Sum_probs=36.3
Q ss_pred ceEEEEEcCCccccCCccCCcccCCCcCCCCcchHHHHHHHHHH
Q 006923 140 NAAFVLVAGGLGERLGYNGIKVALPAETTTGTCFLQNYIECILA 183 (625)
Q Consensus 140 kvavvlLaGGlGTRLG~~~pK~~lpv~~~~~~s~lql~~~~i~~ 183 (625)
++.+|+||||.|||||.+.||.++|+. |++++++.++++..
T Consensus 7 ~~~~iIlA~G~g~R~~~~~~K~l~~i~---g~pll~~~i~~l~~ 47 (236)
T 1i52_A 7 DVCAVVPAAGFGRRMQTECPKQYLSIG---NQTILEHSVHALLA 47 (236)
T ss_dssp CEEEEEEECCCCGGGCCSSCGGGSEET---TEEHHHHHHHHHHT
T ss_pred ceeEEEECCcCccccCCCCCcceeeEC---CEEHHHHHHHHHHh
Confidence 578899999999999976799999984 99999999988754
No 39
>1vgw_A 4-diphosphocytidyl-2C-methyl-D-erythritol synthas; structural genomics, transferase; 2.35A {Neisseria gonorrhoeae} SCOP: c.68.1.13 PDB: 1vgz_A
Probab=96.53 E-value=0.0011 Score=64.55 Aligned_cols=64 Identities=13% Similarity=0.159 Sum_probs=37.6
Q ss_pred ceEEEEEcCCccccCCccCCcccCCCcCCCCcchHHHHHHHHHHHHHHhhhhccCCcccccEEEecCccchHHHHHHHHh
Q 006923 140 NAAFVLVAGGLGERLGYNGIKVALPAETTTGTCFLQNYIECILALQESSCRLAEGKCQEIPFAIMTSDDTHSRTQELLES 219 (625)
Q Consensus 140 kvavvlLaGGlGTRLG~~~pK~~lpv~~~~~~s~lql~~~~i~~l~~~~~~~~~g~~~~iPl~IMTS~~T~~~T~~~l~~ 219 (625)
++.+|+||||.|||||.+.||.++|+. |++++++.++++... + ..-.++|.|+... +.+.+ +.+
T Consensus 6 ~~~aiIlA~G~g~R~~~~~~K~l~~~~---gkpli~~~l~~l~~~----~-------~~~~ivvv~~~~~-~~~~~-~~~ 69 (231)
T 1vgw_A 6 KNIALIPAAGIGVRFGADKPKQYVEIG---SKTVLEHVLGIFERH----E-------AVDLTVVVVSPED-TFADK-VQT 69 (231)
T ss_dssp CEEEEEECC----------CCSCCEET---TEEHHHHHHHHHHTC----T-------TCCEEEEECCTTC-STHHH-HHH
T ss_pred ceEEEEEcccccccCCCCCCceEeEEC---CeEHHHHHHHHHHcC----C-------CCCeEEEEECccH-HHHHH-HHh
Confidence 678899999999999976799999984 999999999887542 0 0124566666543 45555 554
No 40
>2vsh_A TARI, 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; nucleotidyltransferase; HET: 1PE PG4 P6G; 2.00A {Streptococcus pneumoniae} PDB: 2vsi_A*
Probab=96.51 E-value=0.0021 Score=62.59 Aligned_cols=65 Identities=23% Similarity=0.197 Sum_probs=40.7
Q ss_pred eEEEEEcCCccccCCc-cCCcccCCCcCCCCcchHHHHHHHHHHHHHHhhhhccCCcccccEEEecCccchHHHHHHHHh
Q 006923 141 AAFVLVAGGLGERLGY-NGIKVALPAETTTGTCFLQNYIECILALQESSCRLAEGKCQEIPFAIMTSDDTHSRTQELLES 219 (625)
Q Consensus 141 vavvlLaGGlGTRLG~-~~pK~~lpv~~~~~~s~lql~~~~i~~l~~~~~~~~~g~~~~iPl~IMTS~~T~~~T~~~l~~ 219 (625)
+.+|+||||.|||||- +.||.++|+. |++++++.++++... + ..-.++|.|+....+.+.+++++
T Consensus 3 ~~~iIlA~G~g~R~~~~~~~K~l~~i~---g~pli~~~l~~l~~~----~-------~~~~i~vv~~~~~~~~~~~~~~~ 68 (236)
T 2vsh_A 3 IYAGILAGGTGTRMGISNLPKQFLELG---DRPILIHTIEKFVLE----P-------SIEKIVVGVHGDWVSHAEDLVDK 68 (236)
T ss_dssp EEEEEEEC-----------CGGGSEET---TEEHHHHHHHHHHTC----T-------TCCCEEEEECGGGHHHHHHHHHH
T ss_pred eEEEEeCCccccccCCCCCCCeeeeeC---CccHHHHHHHHHHcC----C-------CCCeEEEEeCHHHHHHHHHHHHh
Confidence 5678999999999985 5699999984 999999998887532 0 01256777776655777888765
No 41
>1vpa_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; TM1393, JCSG, joint center for structural GENO PSI, protein structure initiative; HET: CTP; 2.67A {Thermotoga maritima} SCOP: c.68.1.13
Probab=96.49 E-value=0.0013 Score=64.27 Aligned_cols=41 Identities=27% Similarity=0.332 Sum_probs=36.4
Q ss_pred ceEEEEEcCCccccCCccCCcccCCCcCCCCcchHHHHHHHHHH
Q 006923 140 NAAFVLVAGGLGERLGYNGIKVALPAETTTGTCFLQNYIECILA 183 (625)
Q Consensus 140 kvavvlLaGGlGTRLG~~~pK~~lpv~~~~~~s~lql~~~~i~~ 183 (625)
-+..|+||||.|||||.+.||.++|+ .|++++++.++++..
T Consensus 13 ~~~aiILAaG~s~Rm~~~~~K~l~~i---~Gkpli~~~i~~l~~ 53 (234)
T 1vpa_A 13 MNVAILLAAGKGERMSENVPKQFLEI---EGRMLFEYPLSTFLK 53 (234)
T ss_dssp CEEEEEEECCCCGGGCCSSCGGGCEE---TTEETTHHHHHHHHH
T ss_pred cCeEEEEcCcchhhcCCCCCceEEEE---CCeEHHHHHHHHHHc
Confidence 57889999999999997779999998 499999999988754
No 42
>3d5n_A Q97W15_sulso; NESG, SSR125, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.80A {Sulfolobus solfataricus}
Probab=96.45 E-value=0.0019 Score=62.06 Aligned_cols=38 Identities=24% Similarity=0.280 Sum_probs=33.1
Q ss_pred ceEEEEEcCCccccCCccCCcccCCCcCCCCcchHHHHHHHHH
Q 006923 140 NAAFVLVAGGLGERLGYNGIKVALPAETTTGTCFLQNYIECIL 182 (625)
Q Consensus 140 kvavvlLaGGlGTRLG~~~pK~~lpv~~~~~~s~lql~~~~i~ 182 (625)
++.+|+||||.|||||. ||.++|+ .|+++++..++++.
T Consensus 2 ~~~~iIlAgG~g~Rmg~--~K~l~~i---~g~pll~~~l~~l~ 39 (197)
T 3d5n_A 2 NIGVIILAAGEGKRFGG--DKLLAKI---DNTPIIMRTIRIYG 39 (197)
T ss_dssp CEEEEEECSCCTTCCCS--SGGGSBS---SSSBHHHHHHHHTT
T ss_pred ceEEEEECCcCcccCCC--CeeeCEe---CceEHHHHHHHHHH
Confidence 36789999999999984 9999998 49999999888774
No 43
>1e5k_A Molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin nucleotidyl-transferase,; HET: CIT; 1.35A {Escherichia coli} SCOP: c.68.1.8 PDB: 1h4e_A* 1hjl_A* 1hjj_A* 1h4c_A* 1h4d_A* 1fr9_A 1frw_A*
Probab=96.44 E-value=0.0021 Score=62.16 Aligned_cols=39 Identities=26% Similarity=0.353 Sum_probs=35.0
Q ss_pred ceEEEEEcCCccccCCccCCcccCCCcCCCCcchHHHHHHHHH
Q 006923 140 NAAFVLVAGGLGERLGYNGIKVALPAETTTGTCFLQNYIECIL 182 (625)
Q Consensus 140 kvavvlLaGGlGTRLG~~~pK~~lpv~~~~~~s~lql~~~~i~ 182 (625)
++.+|+||||.||||| ..||.++|+ .|+++++..++++.
T Consensus 6 ~~~~iILAgG~s~Rmg-~~~K~ll~i---~G~pli~~~l~~l~ 44 (201)
T 1e5k_A 6 TITGVVLAGGKARRMG-GVDKGLLEL---NGKPLWQHVADALM 44 (201)
T ss_dssp SEEEEEECCCCCSSSC-SSCGGGSEE---TTEEHHHHHHHHHH
T ss_pred cceEEEEcCCCCCcCC-CCCCceeeE---CceeHHHHHHHHHH
Confidence 5788999999999998 579999998 49999999999876
No 44
>3rsb_A Adenosylcobinamide-phosphate guanylyltransferase; pyrophosphorylase binding motif, pyrophosphorylase; HET: GTP; 2.80A {Methanocaldococcus jannaschii}
Probab=96.39 E-value=0.0023 Score=60.90 Aligned_cols=61 Identities=26% Similarity=0.408 Sum_probs=44.9
Q ss_pred EEEEEcCCccccCCccCCcccCCCcCCCCcchHHHHHHHHHHHHHHhhhhccCCcccccEEEecCccchHHHHHHHHh
Q 006923 142 AFVLVAGGLGERLGYNGIKVALPAETTTGTCFLQNYIECILALQESSCRLAEGKCQEIPFAIMTSDDTHSRTQELLES 219 (625)
Q Consensus 142 avvlLaGGlGTRLG~~~pK~~lpv~~~~~~s~lql~~~~i~~l~~~~~~~~~g~~~~iPl~IMTS~~T~~~T~~~l~~ 219 (625)
.+|+||||.|||||- .||.++|+ .|++++++.++++... .--.++|.|+.. ++.+.+++++
T Consensus 2 ~aiIlA~G~s~R~~~-~~K~l~~~---~g~pli~~~l~~l~~~------------~~~~v~vv~~~~-~~~i~~~~~~ 62 (196)
T 3rsb_A 2 DALIMAGGKGTRMGG-VEKPLIKL---CGRCLIDYVVSPLLKS------------KVNNIFIATSPN-TPKTKEYINS 62 (196)
T ss_dssp EEEEEC----CGGGG-SCGGGCEE---TTEEHHHHHHHHHHSS------------SCCCEEEECCTT-CHHHHHHHHH
T ss_pred EEEEECCCCCCcCCC-CCccEEEE---CCEEHHHHHHHHHHHC------------CCCEEEEEeCCC-hHHHHHHHHh
Confidence 578999999999986 79999998 4999999999987532 112567777766 6788888887
No 45
>2px7_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; TTHA0171, ISPD_THET8, ISPD, structural genomics PSI; 2.20A {Thermus thermophilus HB8}
Probab=96.28 E-value=0.0023 Score=63.36 Aligned_cols=37 Identities=27% Similarity=0.378 Sum_probs=26.6
Q ss_pred ceEEEEEcCCccccCCccCCcccCCCcCCCCcchHHHHHHH
Q 006923 140 NAAFVLVAGGLGERLGYNGIKVALPAETTTGTCFLQNYIEC 180 (625)
Q Consensus 140 kvavvlLaGGlGTRLG~~~pK~~lpv~~~~~~s~lql~~~~ 180 (625)
++++|+||||.|||||.+ ||.++|+ .|+++++..+++
T Consensus 25 ~~~aiILAgG~s~Rm~~~-~K~l~~i---~gkpli~~~l~~ 61 (236)
T 2px7_A 25 EVSVLIPAAGNGLRLGRG-PKAFLQV---GGRTLLEWTLAA 61 (236)
T ss_dssp CCEEEEECCC-------C-CGGGCBC---SSSBHHHHHHHH
T ss_pred ceEEEEEcCCCCccCCCC-CCeEEEE---CCEEHHHHHHHh
Confidence 578899999999999966 9999998 499999998887
No 46
>1jyk_A LICC protein, CTP:phosphocholine cytidylytransferase; 3D structure, CTP:phosphocholine cytidylyltransferase; 1.50A {Streptococcus pneumoniae} SCOP: c.68.1.13 PDB: 1jyl_A*
Probab=96.07 E-value=0.0035 Score=62.83 Aligned_cols=41 Identities=24% Similarity=0.340 Sum_probs=36.3
Q ss_pred ceEEEEEcCCccccCC---ccCCcccCCCcCCCCcchHHHHHHHHHH
Q 006923 140 NAAFVLVAGGLGERLG---YNGIKVALPAETTTGTCFLQNYIECILA 183 (625)
Q Consensus 140 kvavvlLaGGlGTRLG---~~~pK~~lpv~~~~~~s~lql~~~~i~~ 183 (625)
++.+|+||||.||||+ .+.||.++|+ .|+++++..++++..
T Consensus 25 ~~~aiIlAaG~gtRl~plt~~~pK~l~~i---~gkpli~~~l~~l~~ 68 (254)
T 1jyk_A 25 RVKAIILAAGLGTRLRPLTENTPKALVQV---NQKPLIEYQIEFLKE 68 (254)
T ss_dssp CCEEEEEECSCCGGGTTTTSSSCGGGCEE---TTEEHHHHHHHHHHH
T ss_pred CceEEEECCCCcccCCcccCCCCCEEeeE---CCEEHHHHHHHHHHH
Confidence 5788999999999998 5789999998 499999999998865
No 47
>3ngw_A Molybdopterin-guanine dinucleotide biosynthesis P (MOBA); alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.31A {Archaeoglobus fulgidus}
Probab=96.06 E-value=0.0032 Score=61.61 Aligned_cols=37 Identities=22% Similarity=0.363 Sum_probs=32.9
Q ss_pred eEEEEEcCCccccCCccCCcccCCCcCCCCcchHHHHHHHHH
Q 006923 141 AAFVLVAGGLGERLGYNGIKVALPAETTTGTCFLQNYIECIL 182 (625)
Q Consensus 141 vavvlLaGGlGTRLG~~~pK~~lpv~~~~~~s~lql~~~~i~ 182 (625)
+..|+||||.|+||| .||.++|+ .|+++++..++.+.
T Consensus 1 m~aiILAgG~s~Rmg--~~K~ll~~---~G~pli~~~~~~l~ 37 (208)
T 3ngw_A 1 MKVAVLVGGVGRRIG--MEKTEVML---CGKKLIEWVLEKYS 37 (208)
T ss_dssp CEEEEECCCCCTTTT--SCGGGCEE---TTEEHHHHHHHHHT
T ss_pred CEEEEECCCchhhCC--CCCcccEE---CCeeHHHHHHHHhc
Confidence 367899999999999 89999998 59999999998874
No 48
>4fcu_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.90A {Acinetobacter baumannii} PDB: 3pol_A
Probab=96.05 E-value=0.023 Score=57.21 Aligned_cols=126 Identities=14% Similarity=0.082 Sum_probs=76.3
Q ss_pred eEEEEEcCCccccCCccCCcccCCCcCCCCcchHHHHH-HHHHHHHHHhhhhccCCcccccEEEecCccchHHHHHHHHh
Q 006923 141 AAFVLVAGGLGERLGYNGIKVALPAETTTGTCFLQNYI-ECILALQESSCRLAEGKCQEIPFAIMTSDDTHSRTQELLES 219 (625)
Q Consensus 141 vavvlLaGGlGTRLG~~~pK~~lpv~~~~~~s~lql~~-~~i~~l~~~~~~~~~g~~~~iPl~IMTS~~T~~~T~~~l~~ 219 (625)
..+|++|||.||||+ +|.++|+ .|++++++.+ +++++. + .-.++|-|. ++.+.+++++
T Consensus 2 ~~aiIlA~G~stR~~---~K~L~~i---~GkPli~~~i~~~~~~~----~--------~~~vvVvt~---~~~i~~~~~~ 60 (253)
T 4fcu_A 2 KHIVIPARFSSSRLP---GKPLLLI---HDRPMILRVVDQAKKVE----G--------FDDLCVATD---DERIAEICRA 60 (253)
T ss_dssp EEEEEECCSCCTTST---TGGGSEE---TTEEHHHHHHHHHHTCT----T--------CCEEEEEES---CHHHHHHHHT
T ss_pred eEEEEEeCCCCCCCC---CCceeeE---CCeEhHHHHHHHHHHhc----C--------CCEEEEECC---HHHHHHHHHH
Confidence 467899999999997 5999998 4999999999 876431 1 113456663 4778888765
Q ss_pred CCCCCCCCCcEEEEEecceeEEecCCCceecCCCCCCccccccCCCchhhHHHhhcChHHHHHHcCceEEEEEeCCCccc
Q 006923 220 NSYFGMKPTQVKLLKQEKVACLDDNDARLAMDPKNKYRIQTKPHGHGDVHALLYSSGLLKEWHDAGLKWVLFFQDTNGLL 299 (625)
Q Consensus 220 ~~~FGl~~~~V~~F~Q~~~P~l~~~~g~~~l~~~~~~~i~~~P~GhGdi~~aL~~sGlL~~l~~~G~~yi~v~~vDN~L~ 299 (625)
||.. ++.... -.|.|.+.++.++. .+...+.+++.+.+-|++|.
T Consensus 61 ---~g~~-------------v~~~~~--------------~~~~Gt~~i~~a~~------~~~~~~~d~vlv~~gD~Pli 104 (253)
T 4fcu_A 61 ---EGVD-------------VVLTSA--------------DHPSGTDRLSEVAR------IKGWDADDIIVNVQGDEPLL 104 (253)
T ss_dssp ---TTCC-------------EEECCT--------------TCCCHHHHHHHHHH------HHTCCTTCEEEECCTTCTTC
T ss_pred ---cCCe-------------EEEeCC--------------CCCChHHHHHHHHH------hcCcCCCCEEEEEeCCcccC
Confidence 3332 111100 01234344444432 23223568999999999886
Q ss_pred cccch-HHHHHHhhc-CCceeeeecc
Q 006923 300 FKAIP-ASLGVSATK-QYHVNSLAVP 323 (625)
Q Consensus 300 ~~~DP-~~lG~~~~~-~~~~~~kvv~ 323 (625)
..-+. .++..+.++ +..+++-+++
T Consensus 105 ~~~~i~~li~~~~~~~~~~~at~~~~ 130 (253)
T 4fcu_A 105 PAQLVQQVAKLLVDKPNCSMSTLCEP 130 (253)
T ss_dssp CHHHHHHHHHHHHHCTTCSEEEEEEE
T ss_pred CHHHHHHHHHHHHhCCCCCEEEEeEE
Confidence 43221 234444444 4566666665
No 49
>2x65_A Mannose-1-phosphate guanylyltransferase; nucleotidyltransferase; HET: M1P; 2.10A {Thermotoga maritima} PDB: 2x5z_A* 2x60_A* 2x5s_A*
Probab=95.97 E-value=0.0061 Score=63.93 Aligned_cols=192 Identities=18% Similarity=0.141 Sum_probs=100.9
Q ss_pred EEEEEcCCccccCC----ccCCcccCCCcCCCC-cchHHHHHHHHHHHHHHhhhhccCCcccccEEEecCccchHHHHHH
Q 006923 142 AFVLVAGGLGERLG----YNGIKVALPAETTTG-TCFLQNYIECILALQESSCRLAEGKCQEIPFAIMTSDDTHSRTQEL 216 (625)
Q Consensus 142 avvlLaGGlGTRLG----~~~pK~~lpv~~~~~-~s~lql~~~~i~~l~~~~~~~~~g~~~~iPl~IMTS~~T~~~T~~~ 216 (625)
..|+||||.||||+ ...||.++|+. | ++++|..++++..+ .+ .-.++|.|.....+.+.++
T Consensus 3 ~~VILAgG~GtRl~Pls~~~~pK~ll~l~---g~~pli~~~l~~l~~~---~~--------~~~iivvt~~~~~~~i~~~ 68 (336)
T 2x65_A 3 KALILAGGSGERFWPLSTPETPKQFLKLF---GNKSLMRWTFERVLEE---MD--------PKDVIVVTHKDYVERTKKE 68 (336)
T ss_dssp EEEEECCCBCGGGTTTSCTTCBGGGCCCB---TTBCHHHHHHHHHHTT---CC--------GGGEEEEEEGGGHHHHHHH
T ss_pred EEEEECCCCCccCCCCcCCCCCceEEECC---CCCcHHHHHHHHHhcc---CC--------CCcEEEEcChHHHHHHHHH
Confidence 56889999999998 56899999984 5 99999999988542 01 1235666665444556666
Q ss_pred HHhCCCCCCCCCcEEEEEecceeEEecCCCceecCCCCCCccccccCCCchhhH-HHhhcChHHHHHHcCceEEEEEeCC
Q 006923 217 LESNSYFGMKPTQVKLLKQEKVACLDDNDARLAMDPKNKYRIQTKPHGHGDVHA-LLYSSGLLKEWHDAGLKWVLFFQDT 295 (625)
Q Consensus 217 l~~~~~FGl~~~~V~~F~Q~~~P~l~~~~g~~~l~~~~~~~i~~~P~GhGdi~~-aL~~sGlL~~l~~~G~~yi~v~~vD 295 (625)
+.+.. ..+ ++..+ .|-|.|.... ++. . . ..-+++.+.+.|
T Consensus 69 l~~~~-----~~~------------------ii~e~--------~~~gta~ai~~a~~------~-~-~~~~~~lvl~~D 109 (336)
T 2x65_A 69 LPELP-----DEN------------------IIAEP--------MKKNTAPACFIGTK------L-A-DDDEPVLVLPAD 109 (336)
T ss_dssp CTTSC-----GGG------------------EEEES--------SCCCHHHHHHHHHT------T-S-CTTCEEEEEETT
T ss_pred hhccc-----cce------------------EEeCC--------CCCCcHHHHHHHHH------h-h-CCCCEEEEEcCC
Confidence 55421 001 12211 1223333222 221 1 1 224688899999
Q ss_pred Cccccccch-----HHHHHHhhcCCceeeeeccCCccCccceEEEEec-CCCceeEEEEeccCccHHHHhcCCCCCCCCC
Q 006923 296 NGLLFKAIP-----ASLGVSATKQYHVNSLAVPRKAKEAIGGITRLTH-ADGRSMVINVEYNQLDPLLRATGFPDGDVNC 369 (625)
Q Consensus 296 N~L~~~~DP-----~~lG~~~~~~~~~~~kvv~r~~~E~vG~i~~~~~-~dG~~~v~nVEYsel~~~l~~~~~~~g~l~~ 369 (625)
.++....+. .++-++.+++..+.+-+.+..|...-|.+..-.. .++-..| ..+.|-+..-.++. .+.
T Consensus 110 ~~~~~~~~~~~~l~~~~~~~~~~~~~vt~~i~p~~~~~~yG~I~~~~~~~~~~~~V--~~f~EKp~~~~a~~----~~~- 182 (336)
T 2x65_A 110 HRIPDTKKFWKTVKKALDALEKYDGLFTFGIVPTRPETGYGYIEIGEELEEGVHKV--AQFREKPDLETAKK----FVE- 182 (336)
T ss_dssp CBCCCHHHHHHHHHHHHHHHHHHCSEEEEEECCCSCCSSSEEEEEEEEEETTEEEE--EEEEESCCHHHHHH----HHH-
T ss_pred ceeccHHHHHHHHHHHHHHHHhcCCeEEEEeecccCCCCceEEEECCccCCCccEE--EEEEECCChHHHHH----HHh-
Confidence 965332111 1222344446655555555556556676642100 0111223 33444433211110 000
Q ss_pred CCCCCCCccceeeEEEehhhhHHHHhh
Q 006923 370 ETGYSPFPGNINQLILELGPYMEELKK 396 (625)
Q Consensus 370 ~~gf~~f~gNinn~~~~l~~l~~~l~~ 396 (625)
.| .|.-|+..+.|+.+.+.+.+++
T Consensus 183 -~g--~y~~n~Giy~~~~~~ll~~l~~ 206 (336)
T 2x65_A 183 -SG--RFLWNSGMFLWKAREFIEEVKV 206 (336)
T ss_dssp -HT--CEEEEEEEEEEEHHHHHHHHHH
T ss_pred -cC--CeEEEeeeEEEEHHHHHHHHHH
Confidence 11 1123999999999887666654
No 50
>2e3d_A UTP--glucose-1-phosphate uridylyltransferase; UDP-glucose, carbohydrate, pyrophosphorylase; 1.95A {Escherichia coli}
Probab=95.85 E-value=0.008 Score=61.42 Aligned_cols=64 Identities=17% Similarity=0.185 Sum_probs=48.6
Q ss_pred ceEEEEEcCCccccCCc---cCCcccCCCcCCCCcchHHHHHHHHHHHHHHhhhhccCCcccccEEEecCccchHHHHHH
Q 006923 140 NAAFVLVAGGLGERLGY---NGIKVALPAETTTGTCFLQNYIECILALQESSCRLAEGKCQEIPFAIMTSDDTHSRTQEL 216 (625)
Q Consensus 140 kvavvlLaGGlGTRLG~---~~pK~~lpv~~~~~~s~lql~~~~i~~l~~~~~~~~~g~~~~iPl~IMTS~~T~~~T~~~ 216 (625)
.+.+|+||||.||||+- +.||.++|+. |++++++.++++... + .-.++|.|+.. .+.+.++
T Consensus 8 ~~~avIlAaG~gtRl~plt~~~pK~ll~i~---gkpli~~~l~~l~~~----g--------i~~i~vv~~~~-~~~i~~~ 71 (302)
T 2e3d_A 8 VKKAVIPVAGLGTRMLPATKAIPKEMLPLV---DKPLIQYVVNECIAA----G--------ITEIVLVTHSS-KNSIENH 71 (302)
T ss_dssp CCEEEEECCSCCGGGTTTTSSSCGGGCEET---TEEHHHHHHHHHHHT----T--------CCEEEEEECGG-GHHHHHH
T ss_pred ccEEEEECCcCcccCCccccCCCceeeEEC---CeEHHHHHHHHHHHC----C--------CCEEEEEeCCC-HHHHHHH
Confidence 45688999999999984 5799999984 899999999988642 2 11356666654 6778888
Q ss_pred HHh
Q 006923 217 LES 219 (625)
Q Consensus 217 l~~ 219 (625)
+.+
T Consensus 72 ~~~ 74 (302)
T 2e3d_A 72 FDT 74 (302)
T ss_dssp HSC
T ss_pred Hhc
Confidence 764
No 51
>4evw_A Nucleoside-diphosphate-sugar pyrophosphorylase; structural genomics, PSI-biology; HET: MSE; 1.90A {Vibrio cholerae}
Probab=95.85 E-value=0.0018 Score=65.19 Aligned_cols=38 Identities=24% Similarity=0.409 Sum_probs=33.0
Q ss_pred EEEEcCCccccCC---ccCCcccCCCcCCCCcchHHHHHHHHHH
Q 006923 143 FVLVAGGLGERLG---YNGIKVALPAETTTGTCFLQNYIECILA 183 (625)
Q Consensus 143 vvlLaGGlGTRLG---~~~pK~~lpv~~~~~~s~lql~~~~i~~ 183 (625)
+|+||||.||||+ .+.||.++|+. |++++++.++++..
T Consensus 2 ~iIlAaG~GtRl~plt~~~PK~llpv~---gkpli~~~l~~l~~ 42 (255)
T 4evw_A 2 IVIPMAGMSSRFFKAGYTQPKYMLEAH---GQTLFEHSVNSFAA 42 (255)
T ss_dssp EEEECCSCCHHHHHTTCCSCGGGCEET---TEEHHHHHHGGGGG
T ss_pred EEEEcCCCCcccccCCCCCCccccEEC---CeEHHHHHHHHHhc
Confidence 6889999999995 47899999984 99999999988753
No 52
>2ux8_A Glucose-1-phosphate uridylyltransferase; UGPG, GALU pyrophosphorylase, nucleotidyltransferase; HET: G1P; 2.65A {Sphingomonas elodea}
Probab=95.78 E-value=0.0069 Score=61.83 Aligned_cols=64 Identities=17% Similarity=0.139 Sum_probs=48.4
Q ss_pred ceEEEEEcCCccccCCc---cCCcccCCCcCCCCcchHHHHHHHHHHHHHHhhhhccCCcccccEEEecCccchHHHHHH
Q 006923 140 NAAFVLVAGGLGERLGY---NGIKVALPAETTTGTCFLQNYIECILALQESSCRLAEGKCQEIPFAIMTSDDTHSRTQEL 216 (625)
Q Consensus 140 kvavvlLaGGlGTRLG~---~~pK~~lpv~~~~~~s~lql~~~~i~~l~~~~~~~~~g~~~~iPl~IMTS~~T~~~T~~~ 216 (625)
.+.+|+||||.||||+- ..||.++|+. |++++++.++++... + .-.++|.|+.. .+.+.++
T Consensus 14 ~~~avIlAaG~gtRl~plt~~~pK~ll~i~---gkpli~~~l~~l~~~----g--------~~~i~vv~~~~-~~~i~~~ 77 (297)
T 2ux8_A 14 LRKAVFPVAGLGTRFLPATKAMPKEMLPVV---DRPLIQYAVDEAVEA----G--------IEQMIFVTGRG-KSALEDH 77 (297)
T ss_dssp CCEEEEEECCCCGGGTTTTSSSCGGGCEET---TEEHHHHHHHHHHHT----T--------CCEEEEEECTT-CHHHHHH
T ss_pred ccEEEEECCCCccccCccccCCCceeeeEC---CeEHHHHHHHHHHhC----C--------CCEEEEEeCCC-HHHHHHH
Confidence 56789999999999974 6799999984 899999999988642 2 11356666544 6777777
Q ss_pred HHh
Q 006923 217 LES 219 (625)
Q Consensus 217 l~~ 219 (625)
+.+
T Consensus 78 ~~~ 80 (297)
T 2ux8_A 78 FDI 80 (297)
T ss_dssp TSC
T ss_pred Hhh
Confidence 654
No 53
>2e8b_A Probable molybdopterin-guanine dinucleotide biosy protein A; putative protein, molybdenum cofactor, structural G NPPSFA; 1.61A {Aquifex aeolicus}
Probab=95.74 E-value=0.0017 Score=62.62 Aligned_cols=39 Identities=21% Similarity=0.306 Sum_probs=34.4
Q ss_pred ceEEEEEcCCccccCCccCCcccCCCcCCCCcchHHHHHHHHHH
Q 006923 140 NAAFVLVAGGLGERLGYNGIKVALPAETTTGTCFLQNYIECILA 183 (625)
Q Consensus 140 kvavvlLaGGlGTRLG~~~pK~~lpv~~~~~~s~lql~~~~i~~ 183 (625)
++.+|+||||.||||| .||.++|+. |+++++..++++..
T Consensus 14 ~~~~iILA~G~g~Rmg--~~K~ll~i~---g~pll~~~l~~l~~ 52 (201)
T 2e8b_A 14 VNTCYVLAGGKSKRFG--EDKLLYEIK---GKKVIERVYETAKS 52 (201)
T ss_dssp CCEEEEEEESSCCCCS--TTHHHHHHH---HHHHHHHHHHHHHT
T ss_pred CceEEEECCCCCccCC--CCcccceEC---ceEHHHHHHHHHHH
Confidence 5788999999999998 799999984 89999999988754
No 54
>2xme_A CTP-inositol-1-phosphate cytidylyltransferase; CDP-inositol, DI-MYO-inositol phosphate; 1.89A {Archaeoglobus fulgidus} PDB: 2xmh_A*
Probab=95.48 E-value=0.0058 Score=59.87 Aligned_cols=42 Identities=26% Similarity=0.302 Sum_probs=29.7
Q ss_pred hcceEEEEEcCCccccCCccCCcccCCCcCCCCcchHHHHHHHHHH
Q 006923 138 AKNAAFVLVAGGLGERLGYNGIKVALPAETTTGTCFLQNYIECILA 183 (625)
Q Consensus 138 l~kvavvlLaGGlGTRLG~~~pK~~lpv~~~~~~s~lql~~~~i~~ 183 (625)
..++.+|+||||.|||||-. ||.++|+. |+++++..++++..
T Consensus 16 m~~~~~iIlA~G~g~R~~~~-~K~l~~i~---g~pli~~~l~~l~~ 57 (232)
T 2xme_A 16 IKLMKAVILAAGLGTRLGGV-PKPLVRVG---GCEIILRTMKLLSP 57 (232)
T ss_dssp CCCEEEEEEECC------CC-CGGGCEET---TEEHHHHHHHHHGG
T ss_pred cccceEEEECCcCcCcCCCC-CcEEeEEC---CEEHHHHHHHHHHH
Confidence 44678999999999999743 99999984 89999999888753
No 55
>2pa4_A UTP-glucose-1-phosphate uridylyltransferase; phosphorylase, nucleotidyltransferase, metabolism; HET: GUD; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=95.34 E-value=0.012 Score=61.05 Aligned_cols=62 Identities=24% Similarity=0.195 Sum_probs=45.7
Q ss_pred eEEEEEcCCccccCCc---cCCcccCCCcCCCCcchHHHHHHHHHHHHHHhhhhccCCcccccEEEecCccchHHHHHHH
Q 006923 141 AAFVLVAGGLGERLGY---NGIKVALPAETTTGTCFLQNYIECILALQESSCRLAEGKCQEIPFAIMTSDDTHSRTQELL 217 (625)
Q Consensus 141 vavvlLaGGlGTRLG~---~~pK~~lpv~~~~~~s~lql~~~~i~~l~~~~~~~~~g~~~~iPl~IMTS~~T~~~T~~~l 217 (625)
+.+|+||||.||||+- ..||.++|+. |++++++.++++... + .-.++|.|+.. .+.+.+++
T Consensus 13 ~~aVIlAaG~gtRl~plt~~~pK~ll~i~---gkpli~~~l~~l~~~----g--------i~~iivv~~~~-~~~i~~~~ 76 (323)
T 2pa4_A 13 KTVVVPAAGLGTRFLPATKTVPKELLPVV---DTPGIELIAAEAAEL----G--------ATRLAIITAPN-KAGVLAHF 76 (323)
T ss_dssp CEEEEECCCCCGGGTTGGGTSCGGGCEET---TEEHHHHHHHHHHHT----T--------CCEEEEEECTT-CHHHHHTT
T ss_pred eEEEEECCCCccccCccccCCCceeeeEC---CEEHHHHHHHHHHhC----C--------CCEEEEEecCc-HHHHHHHH
Confidence 5678999999999974 6799999984 899999999988642 2 11356666553 56666655
Q ss_pred H
Q 006923 218 E 218 (625)
Q Consensus 218 ~ 218 (625)
.
T Consensus 77 ~ 77 (323)
T 2pa4_A 77 E 77 (323)
T ss_dssp S
T ss_pred h
Confidence 4
No 56
>1w55_A ISPD/ISPF bifunctional enzyme; biosynthetic pathway, isoprenoids, nonmevalonate, transferase; HET: C GPP; 2.3A {Campylobacter jejuni} SCOP: c.68.1.13 d.79.5.1 PDB: 1w57_A*
Probab=95.13 E-value=0.013 Score=62.58 Aligned_cols=41 Identities=12% Similarity=0.107 Sum_probs=36.0
Q ss_pred ceEEEEEcCCccccCCccCCcccCCCcCCCCcchHHHHHHHHHH
Q 006923 140 NAAFVLVAGGLGERLGYNGIKVALPAETTTGTCFLQNYIECILA 183 (625)
Q Consensus 140 kvavvlLaGGlGTRLG~~~pK~~lpv~~~~~~s~lql~~~~i~~ 183 (625)
++++|+||||.|||||.+.||.++|+. |++++++.++++.+
T Consensus 3 ki~aIILAaG~ssRmg~~~pK~ll~l~---GkPLi~~~l~~l~~ 43 (371)
T 1w55_A 3 EMSLIMLAAGNSTRFNTKVKKQFLRLG---NDPLWLYATKNLSS 43 (371)
T ss_dssp CEEEEEECCSCCTTTCSSSCGGGCEEB---TEEHHHHHHHHHHT
T ss_pred ccEEEEECCCCCccCCCCCCcceEEEC---CeEHHHHHHHHHHc
Confidence 578899999999999977799999984 99999999988753
No 57
>2cu2_A Putative mannose-1-phosphate guanylyl transferase; mannose-1-phosphate geranyltransferase, thermus thermophilus structural genomics; 2.20A {Thermus thermophilus} SCOP: b.81.4.1 c.68.1.20
Probab=94.71 E-value=0.02 Score=59.93 Aligned_cols=40 Identities=30% Similarity=0.347 Sum_probs=34.3
Q ss_pred eEEEEEcCCccccCC----ccCCcccCCCcCCCC-cchHHHHHHHHHH
Q 006923 141 AAFVLVAGGLGERLG----YNGIKVALPAETTTG-TCFLQNYIECILA 183 (625)
Q Consensus 141 vavvlLaGGlGTRLG----~~~pK~~lpv~~~~~-~s~lql~~~~i~~ 183 (625)
+..|+||||.||||. ...||.++|+. | ++++|..++++..
T Consensus 3 m~~VILAgG~GtRl~Pls~~~~pK~ll~l~---G~~pli~~~l~~l~~ 47 (337)
T 2cu2_A 3 TYALVMAGGRGERLWPLSREDRPKPFLPLF---EGKTLLEATLERLAP 47 (337)
T ss_dssp EEEEEECCCCCGGGTTTCBTTBCGGGCBCG---GGCBHHHHHHHHHTT
T ss_pred eEEEEEcCCCcccCCccCCCCCCceEEEcC---CCChHHHHHHHHHhC
Confidence 567999999999996 46799999984 5 9999999988754
No 58
>2dpw_A Hypothetical protein TTHA0179; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 2.90A {Thermus thermophilus} SCOP: c.68.1.19
Probab=93.95 E-value=0.034 Score=54.53 Aligned_cols=40 Identities=30% Similarity=0.538 Sum_probs=32.9
Q ss_pred ceEEEEEcCCc---cccCCccCCcccCCCcCCCCcchHHHHHHHHHH
Q 006923 140 NAAFVLVAGGL---GERLGYNGIKVALPAETTTGTCFLQNYIECILA 183 (625)
Q Consensus 140 kvavvlLaGGl---GTRLG~~~pK~~lpv~~~~~~s~lql~~~~i~~ 183 (625)
++.+|+||||. |+||| ..||.++|+ .|++++++.++++..
T Consensus 2 ~~~~vIlAaG~tRl~~r~~-~~~K~l~~i---~g~pll~~~l~~l~~ 44 (232)
T 2dpw_A 2 RPSAIVLAGGKEAWAERFG-VGSKALVPY---RGRPMVEWVLEALYA 44 (232)
T ss_dssp CCEEEEECCCBCSGGGTTT-CSBGGGSEE---TTEETHHHHHHHHHH
T ss_pred ceeEEEECCCCCccccccC-CCCceeeEE---CCEEHHHHHHHHHHh
Confidence 35788999999 66665 379999998 499999999998864
No 59
>2ggo_A 401AA long hypothetical glucose-1-phosphate thymidylyltransferase; beta barrel; 1.80A {Sulfolobus tokodaii} PDB: 2ggq_A*
Probab=93.82 E-value=0.034 Score=58.74 Aligned_cols=59 Identities=22% Similarity=0.290 Sum_probs=44.9
Q ss_pred EEEEEcCCccccCC---ccCCcccCCCcCCCCcchHHHHHHHHHHHHHHhhhhccCCcccccEEEecCccchHHHHHHHH
Q 006923 142 AFVLVAGGLGERLG---YNGIKVALPAETTTGTCFLQNYIECILALQESSCRLAEGKCQEIPFAIMTSDDTHSRTQELLE 218 (625)
Q Consensus 142 avvlLaGGlGTRLG---~~~pK~~lpv~~~~~~s~lql~~~~i~~l~~~~~~~~~g~~~~iPl~IMTS~~T~~~T~~~l~ 218 (625)
..|+||||.||||+ ...||.++|+ .|++++++.++++.+. + --.++|.|+.. +.++++
T Consensus 2 ~aiIlA~G~g~R~~plt~~~~K~ll~i---~g~pli~~~l~~l~~~----~--------~~~i~vv~~~~----i~~~~~ 62 (401)
T 2ggo_A 2 KAFILAAGSGERLEPITHTRPKAFVPI---LSKPLIEYQIEYLRKC----G--------IRDITVIVSSK----NKEYFE 62 (401)
T ss_dssp EEEEECCCCCGGGTTGGGTSCGGGCEE---TTEEHHHHHHHHHHHT----T--------CCEEEEEECGG----GHHHHH
T ss_pred eEEEEcCcCccccCcccCCCCcceeeE---CCEeHHHHHHHHHHHC----C--------CCEEEEEeCHH----HHHHhh
Confidence 46899999999997 4679999998 4999999999988653 1 11356667655 667776
Q ss_pred h
Q 006923 219 S 219 (625)
Q Consensus 219 ~ 219 (625)
+
T Consensus 63 ~ 63 (401)
T 2ggo_A 63 K 63 (401)
T ss_dssp H
T ss_pred c
Confidence 5
Done!