Query 006926
Match_columns 625
No_of_seqs 150 out of 213
Neff 4.1
Searched_HMMs 46136
Date Thu Mar 28 16:28:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006926.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/006926hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2769 Putative u4/u6 small n 100.0 2E-128 5E-133 1025.6 32.5 425 135-624 94-522 (522)
2 PF08572 PRP3: pre-mRNA proces 100.0 3.6E-72 7.9E-77 557.1 20.1 221 239-470 1-223 (223)
3 PF06544 DUF1115: Protein of u 100.0 4.5E-42 9.8E-47 314.3 10.9 128 492-619 1-128 (128)
4 PF04940 BLUF: Sensors of blue 95.6 0.016 3.5E-07 51.4 4.3 66 510-594 27-92 (93)
5 PRK14441 acylphosphatase; Prov 69.0 4.8 0.0001 35.8 3.1 45 504-548 19-64 (93)
6 PRK14432 acylphosphatase; Prov 69.0 4.8 0.0001 36.0 3.1 45 505-549 17-63 (93)
7 PRK14452 acylphosphatase; Prov 68.9 4.6 9.9E-05 37.2 3.0 50 501-550 31-81 (107)
8 PRK14430 acylphosphatase; Prov 68.9 4.6 0.0001 36.0 2.9 44 504-547 18-62 (92)
9 PRK14436 acylphosphatase; Prov 68.2 4.9 0.00011 35.7 2.9 46 504-549 18-64 (91)
10 PRK14421 acylphosphatase; Prov 68.1 4.9 0.00011 36.5 3.0 45 504-548 18-63 (99)
11 PRK14424 acylphosphatase; Prov 67.4 4.9 0.00011 36.1 2.8 46 503-548 20-66 (94)
12 PRK14445 acylphosphatase; Prov 67.3 5.6 0.00012 35.2 3.1 45 504-548 18-63 (91)
13 PRK14429 acylphosphatase; Prov 66.1 5.5 0.00012 35.2 2.8 46 505-550 17-63 (90)
14 PRK14449 acylphosphatase; Prov 66.0 5.5 0.00012 35.2 2.8 45 505-549 18-63 (90)
15 PRK14420 acylphosphatase; Prov 65.6 5.9 0.00013 34.9 2.9 46 505-550 17-63 (91)
16 PRK14426 acylphosphatase; Prov 65.2 5.9 0.00013 35.2 2.8 46 503-548 17-63 (92)
17 PRK14427 acylphosphatase; Prov 64.6 6.4 0.00014 35.2 3.0 46 504-549 20-66 (94)
18 PRK14435 acylphosphatase; Prov 64.5 6.1 0.00013 35.0 2.8 44 505-548 17-61 (90)
19 PRK14440 acylphosphatase; Prov 64.2 6.5 0.00014 34.8 2.9 44 505-548 18-62 (90)
20 PRK14448 acylphosphatase; Prov 64.0 6.3 0.00014 34.9 2.8 44 505-548 17-61 (90)
21 PF00708 Acylphosphatase: Acyl 63.3 6.5 0.00014 34.2 2.7 53 501-553 15-68 (91)
22 PRK14442 acylphosphatase; Prov 63.2 7.5 0.00016 34.5 3.1 45 504-548 18-63 (91)
23 PRK14437 acylphosphatase; Prov 61.1 7.5 0.00016 35.9 2.8 48 501-548 34-82 (109)
24 PRK14422 acylphosphatase; Prov 61.1 8.3 0.00018 34.4 3.0 47 503-549 19-66 (93)
25 PRK10455 periplasmic protein; 60.9 42 0.0009 33.0 8.1 75 384-474 53-136 (161)
26 PRK10363 cpxP periplasmic repr 60.8 43 0.00093 33.4 8.1 77 382-474 45-130 (166)
27 PRK14433 acylphosphatase; Prov 59.9 8.8 0.00019 33.8 3.0 44 505-548 16-60 (87)
28 PRK14451 acylphosphatase; Prov 59.8 8.5 0.00018 34.1 2.8 46 504-549 17-63 (89)
29 PRK14438 acylphosphatase; Prov 58.9 9.2 0.0002 33.9 2.9 43 505-547 18-61 (91)
30 PRK14423 acylphosphatase; Prov 58.1 9.7 0.00021 33.8 2.9 46 505-550 20-66 (92)
31 PRK14450 acylphosphatase; Prov 57.7 9.8 0.00021 33.6 2.9 43 505-547 17-61 (91)
32 PRK12751 cpxP periplasmic stre 56.5 57 0.0012 32.3 8.2 79 383-474 52-136 (162)
33 PRK14425 acylphosphatase; Prov 56.3 11 0.00023 33.8 2.9 45 504-548 20-65 (94)
34 PRK14443 acylphosphatase; Prov 56.0 12 0.00025 33.7 3.1 45 505-549 19-64 (93)
35 PRK14446 acylphosphatase; Prov 54.2 13 0.00029 33.0 3.1 43 506-548 18-61 (88)
36 PRK14444 acylphosphatase; Prov 54.0 12 0.00027 33.2 2.9 46 504-549 18-64 (92)
37 PF13801 Metal_resist: Heavy-m 53.7 86 0.0019 27.0 8.2 79 385-474 39-124 (125)
38 PF08690 GET2: GET complex sub 52.2 11 0.00025 40.4 2.9 26 388-413 2-32 (302)
39 PRK14434 acylphosphatase; Prov 48.7 17 0.00036 32.5 2.9 45 505-549 17-64 (92)
40 PRK14439 acylphosphatase; Prov 48.6 16 0.00035 36.3 3.0 46 504-549 89-135 (163)
41 PRK14428 acylphosphatase; Prov 48.3 17 0.00037 32.9 2.9 46 503-548 21-67 (97)
42 PRK14431 acylphosphatase; Prov 48.2 22 0.00048 31.5 3.6 45 505-549 17-61 (89)
43 COG1254 AcyP Acylphosphatases 46.3 19 0.00042 32.4 2.9 49 500-548 14-63 (92)
44 PRK14447 acylphosphatase; Prov 44.9 25 0.00054 31.5 3.4 44 505-548 19-64 (95)
45 KOG3360 Acylphosphatase [Energ 39.0 56 0.0012 30.2 4.7 68 511-593 29-97 (98)
46 PHA00431 internal virion prote 27.7 45 0.00098 39.4 2.7 74 424-513 38-114 (746)
47 PRK12750 cpxP periplasmic repr 25.6 2.9E+02 0.0062 27.5 7.5 17 384-400 49-65 (170)
48 COG5154 BRX1 RNA-binding prote 24.1 67 0.0015 33.5 2.9 40 433-472 231-270 (283)
49 PF12396 DUF3659: Protein of u 23.0 51 0.0011 28.0 1.5 19 188-206 38-56 (64)
50 TIGR00985 3a0801s04tom mitocho 20.6 2.3E+02 0.0049 27.9 5.6 19 437-455 79-97 (148)
No 1
>KOG2769 consensus Putative u4/u6 small nuclear ribonucleoprotein [RNA processing and modification]
Probab=100.00 E-value=2.2e-128 Score=1025.59 Aligned_cols=425 Identities=50% Similarity=0.749 Sum_probs=374.7
Q ss_pred ccccHHHHHHHHHHHHHhcCCCCCCCccccccCCCCCCCCCCC--CCCCCCCCceEecCCC--CeeccCCCeeeccCCCc
Q 006926 135 NITNIEAVKRAQELAAKMGFRQDPEFAPIINCFPGQPPVDAAV--PQKPTKAPVLRVDALG--REIDEHGNVVNRTKPSN 210 (625)
Q Consensus 135 ~~~~~~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~--~~~~~kp~~L~lD~~G--R~ID~~G~vI~~~kp~~ 210 (625)
+...+++++|++.|+.. ++++..+.+..+ +..|+++..|+.|+.| |.||+.|++|. ++|..
T Consensus 94 s~~~~~~~~r~~~L~~~--------------~~~~~~t~~~~~~~a~~~tkg~~l~~~~le~~r~i~e~~~~i~-t~~~~ 158 (522)
T KOG2769|consen 94 SKQILEAVKRPQELAQN--------------IQNSIRTPDMPISKAIKQTKGAVLRQDALEKKRKIDELGNVID-TKPSN 158 (522)
T ss_pred hHHHHHHHhhhhhhccc--------------cccccCCcccchhhhhcccccceeehhhhhhhhhHhhhcchhh-ccccc
Confidence 34556899999998665 223333444445 6789999999999999 99999999999 78888
Q ss_pred ccchhhhhhhhhhhHHHhcCCCcCCCCCCCCCCCCCCCCCcccccCCCccceeeccCchhHHHHHHHHHHhhhchHHHHH
Q 006926 211 LSTLKVNINKQKKDAFQILKPELEVDPNVNPHFDPRMGINKSKLLRPKRMTFQFVEEGKWSKEAEILRVKSQFGEAGAKE 290 (625)
Q Consensus 211 ~sTLKaNir~~k~e~f~~~k~~~~~~~~~npyfD~r~~~~~~k~~R~kR~~f~F~ekGKy~kqAe~lR~k~qlee~q~ee 290 (625)
.++|..|++ ++ ... ...| +|++|+||++|+|++.|++.|.++++ ++
T Consensus 159 ~~~li~n~d-------------------------~~-~~~--~~~r-~rr~f~f~e~gkf~~~an~~r~~a~l-----e~ 204 (522)
T KOG2769|consen 159 LSGLIPNLD-------------------------PR-TKK--PRKR-GRRTFLFHESGKFIKLANRHRYKAQL-----ER 204 (522)
T ss_pred ccccccccC-------------------------hh-hcc--chhc-cccceeecccchHHHHHHHHHHHHHH-----HH
Confidence 888877754 33 111 2234 45699999999999999999988776 68
Q ss_pred HHHHHHHHHHhcCCCCCCcchHHHHhhhhccCCCCCCCCccccccccccCCCCCCCCCcchhhhhhhccccccceeeCCC
Q 006926 291 RQAKQAQLAKAKGGTDINPNLIEVAERVITKEKPKDPIPEIEWWDAPLLLTGSYADISDDVTIEDKLKREKITIYVEHPR 370 (625)
Q Consensus 291 lk~~~a~~ak~k~~~~i~~~l~ei~e~~~~k~~~~~~iP~VEWWD~~iL~~~~y~~i~~~~~~~~~l~~~~It~yVEHPv 370 (625)
|+.++++++++. ||++ ++.++...+ .++||+|||||..||+.+.|.+.+ ...+....||+|||||+
T Consensus 205 Lq~eis~~a~k~---gI~~-~~~la~~~p-----~~~iP~iEwwD~~il~~~d~~dEn-----~~~i~~~~it~~IeHP~ 270 (522)
T KOG2769|consen 205 LQNEISQAARKT---GIST-ATKLALIAP-----KDDIPAIEWWDSNILTNDDTIDEN-----HLKIDQSIITNLIEHPI 270 (522)
T ss_pred HHHHHHHHHHhc---CCch-hhhhhhccC-----CCCCchhhhhcccccccCCccccc-----chhhhHHHHHHHhcCCc
Confidence 999999999853 4766 667777654 389999999999999887433221 22333578999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhhhhhhhccccCCCChHHHHHHHH
Q 006926 371 PIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAREKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTRLEKEIRS 450 (625)
Q Consensus 371 pi~pp~e~~~p~~~plyLTKKEqKKLRRqrR~e~~KEkQdKIRLGL~PPPpPKVKLSNLMrVLg~eAV~DPTkvEa~VR~ 450 (625)
||.||.++..|+++|||||||||||||||||+|++||+|+||||||+|||+|||||||||+|||+|||||||+||++||.
T Consensus 271 ~~~PP~e~~~p~~l~vyLTKKErKKLRRQ~R~ea~KEkqekIrLGL~~ppePKVKiSNLMrVLgsEAiqDPTK~E~~VR~ 350 (522)
T KOG2769|consen 271 PMLPPAENLTPVSLPVYLTKKERKKLRRQRRKEARKEKQEKIRLGLEPPPEPKVKLSNLMRVLGSEAIQDPTKLEAEVRD 350 (522)
T ss_pred ccCCCcccCCCCccceeecHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcchHHHHHHHhhhccccCcHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhccCCHHHHHHHHHhhhcCCCCCCceEEEEEEEccCCCCccccccccccccccceeEEEEcCCceE
Q 006926 451 AAAEREQAHIDRNIARKLTPAERREKKERKLFDDPSSVETIVSVYKINDLSHPKTRFKVDVNAHENRLTGCAVICEGINV 530 (625)
Q Consensus 451 QmeeR~~~He~~NeeRKLT~EqRreKk~~K~~eD~~s~~v~vaVyrI~~LsnP~hrFKVd~NAqQl~LTG~~li~~~~nl 530 (625)
||++|+++||++|++||||++||++|+.+|+.+|+ +.||||+||+|++|+||++||||++||+||+||||||++.+||+
T Consensus 351 Q~aeR~kaHe~~N~aRKLT~~qkreKk~rKl~ED~-st~v~~~V~r~K~l~~p~~rFKve~NAkql~ltG~~vl~~d~~v 429 (522)
T KOG2769|consen 351 QMAERQKAHEDENAARKLTPEQKREKKERKLFEDP-STGVHCSVYRIKNLQNPKKRFKVEMNAKQLQLTGVCVLHRDMNV 429 (522)
T ss_pred HHHHHHHHhhhhhhhhcCCHHHHHHHHHhhhccCC-CceEEEEEEEEecccCCccceeeeechhhhceeeeEEEecCCcE
Confidence 99999999999999999999999999999999998 57999999999999999999999999999999999999999999
Q ss_pred EEEecchhHHHHHhhhhhhccCccccccccCcCccccCCCCCCeeEEEEeeecCCCCCCCeeEEecCCHHHHHHHHHhcC
Q 006926 531 VVVEGGSKSIKRYGKLMLRRIDWAKAVKEEDEDEDETTDKPVNKCVLVWQGNVARPSFNRFFVHECMTEAAAKKVFADAG 610 (625)
Q Consensus 531 VVVEGG~KsiKkYkkLMl~RIkW~e~~~~~d~~~~e~~d~~~N~C~LVWEG~vk~r~F~~w~~k~c~te~~Are~L~k~~ 610 (625)
||||||+||||||++|||+||||+|++... .++|++.+..+|+|+|||||++.+|+|++|+|+.|+||.+||+||++||
T Consensus 430 vVvEGg~Ka~KkykrLMl~RIkW~e~~~~k-~d~~~e~~~~~N~C~lvWEG~~~rr~F~~~~~k~c~~e~~Ar~~f~k~g 508 (522)
T KOG2769|consen 430 VVVEGGPKAQKKYKRLMLKRIKWEEDFELK-KDEDEEAVNGGNKCVLVWEGTVQRRSFREFKFKECPTEKMAREFFEKHG 508 (522)
T ss_pred EEEecCHHHHHHHHHHHHhhcCchhhhhhc-ccchhhccCCCceEEEEeeccccCCcccceeEEecCcHHHHHHHHHHcc
Confidence 999999999999999999999999996322 2556677889999999999999999999999999999999999999999
Q ss_pred chhHHHHHhcccCC
Q 006926 611 VAHYWDLAVNFNDE 624 (625)
Q Consensus 611 ~ehYWdlA~~~~~~ 624 (625)
|+||||||++|+..
T Consensus 509 veHyWdLa~s~s~~ 522 (522)
T KOG2769|consen 509 VEHYWDLAYSYSVL 522 (522)
T ss_pred hHHHHHHHhhccCC
Confidence 99999999999863
No 2
>PF08572 PRP3: pre-mRNA processing factor 3 (PRP3); InterPro: IPR013881 Pre-mRNA processing factor 3 (PRP3) is a U4/U6-associated splicing factor. The human PRP3 has been implicated in autosomal retinitis pigmentosa [].
Probab=100.00 E-value=3.6e-72 Score=557.05 Aligned_cols=221 Identities=49% Similarity=0.805 Sum_probs=184.6
Q ss_pred CCCCCCCCCCCCcccccCCCccceeeccCchhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCCcchHHHHhhh
Q 006926 239 VNPHFDPRMGINKSKLLRPKRMTFQFVEEGKWSKEAEILRVKSQFGEAGAKERQAKQAQLAKAKGGTDINPNLIEVAERV 318 (625)
Q Consensus 239 ~npyfD~r~~~~~~k~~R~kR~~f~F~ekGKy~kqAe~lR~k~qlee~q~eelk~~~a~~ak~k~~~~i~~~l~ei~e~~ 318 (625)
+||||||++... +..++++++|+||++|+|+++|+++|.+++++ +++.++++.++.. ++.++. .+.+..
T Consensus 1 ~npy~d~~~~~~--~~~~r~~r~l~F~e~Gk~~~~a~~~R~~~~~e-----~~~~~~~~~~~~~---g~~~~~-~~~~~~ 69 (223)
T PF08572_consen 1 ENPYFDPRLKKS--KPKKRKRRALKFHEKGKFIKQAEQLRRKAQLE-----ELKKEIAEEARKA---GIQSAE-KLAEKI 69 (223)
T ss_pred CCCCcCCccccc--ccccCCCCCceecCcchHHHHHHHHHHHHHHH-----HHHHHHHHHHHHc---CCchhh-HHHHhh
Confidence 599999999822 23455567999999999999999999988774 4555555555432 343322 344545
Q ss_pred hccCCCCCCCCccccccccccCCCCCCCCCcchhhhhhhccccccceeeCCCCCCCCCCCCCCCC--CCCCCCHHHHHHH
Q 006926 319 ITKEKPKDPIPEIEWWDAPLLLTGSYADISDDVTIEDKLKREKITIYVEHPRPIEPPAEPAPPPP--QPLKLTKKEQKKL 396 (625)
Q Consensus 319 ~~k~~~~~~iP~VEWWD~~iL~~~~y~~i~~~~~~~~~l~~~~It~yVEHPvpi~pp~e~~~p~~--~plyLTKKEqKKL 396 (625)
+..+...++||+|||||.+||++++|++++++...+....+..||+||||||||++|.+...+.+ +||||||||||||
T Consensus 70 ~~~~~~~~~iPdiEWWD~~~l~~~~y~~~~~~~~~~~~~~~~~It~~VeHPv~i~~p~~~~~~~~~~~~~~LTkkErKKl 149 (223)
T PF08572_consen 70 PKRELPEDEIPDIEWWDRPILPDPSYDDLNDESDLEIDEEESSITNYVEHPVPIKPPYEKNKPPPVVPPVYLTKKERKKL 149 (223)
T ss_pred cccccccccCCCccccchhhcCCCCccccccccchhcccchhhhhhhhhCCCCCCCccccccccccccCcccChHHHHHH
Confidence 54455568999999999999999999988765322222246789999999999999999665554 9999999999999
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCCccchhhhhhhhhccccCCCChHHHHHHHHHHHHHHHHHHHHHHhccCCH
Q 006926 397 RTQRRLAREKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTRLEKEIRSAAAEREQAHIDRNIARKLTP 470 (625)
Q Consensus 397 RRqrR~e~~KEkQdKIRLGL~PPPpPKVKLSNLMrVLg~eAV~DPTkvEa~VR~QmeeR~~~He~~NeeRKLT~ 470 (625)
|||+|+++++|+||||||||+|||+|||||||||+|||++||+|||+||++||+||++|+++|+++|++||||+
T Consensus 150 Rr~rR~e~~kEkq~kIrlGL~ppP~PKVKlSNLMrVL~~eAV~DPT~vE~~Vr~Q~eeR~~~He~~N~~RkLt~ 223 (223)
T PF08572_consen 150 RRQRRQEKQKEKQDKIRLGLEPPPPPKVKLSNLMRVLGNEAVQDPTKVEAKVRKQMEERQQKHEERNEERKLTP 223 (223)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCCCCcccHHHHHHHhhcchhcCcHHHHHHHHHHHHHHHHHHHHHHHHcccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999996
No 3
>PF06544 DUF1115: Protein of unknown function (DUF1115); InterPro: IPR010541 This entry represents the C terminus of several eukaryotic RWD domain-containing proteins of unknown function.
Probab=100.00 E-value=4.5e-42 Score=314.35 Aligned_cols=128 Identities=44% Similarity=0.755 Sum_probs=117.6
Q ss_pred EEEEEEccCCCCccccccccccccccceeEEEEcCCceEEEEecchhHHHHHhhhhhhccCccccccccCcCccccCCCC
Q 006926 492 VSVYKINDLSHPKTRFKVDVNAHENRLTGCAVICEGINVVVVEGGSKSIKRYGKLMLRRIDWAKAVKEEDEDEDETTDKP 571 (625)
Q Consensus 492 vaVyrI~~LsnP~hrFKVd~NAqQl~LTG~~li~~~~nlVVVEGG~KsiKkYkkLMl~RIkW~e~~~~~d~~~~e~~d~~ 571 (625)
|+||+|++|+||+|||||+.||+||+|||||++++.+||||||||++||++|++||++||+|+|+....+..+++..+..
T Consensus 1 ~~~~~I~~L~~p~~R~kI~~nA~ql~LtG~~~~g~~pgiIvvEG~~k~i~~y~~lmlrri~W~e~~~~~~~~~e~~~~~~ 80 (128)
T PF06544_consen 1 CYVHHIKSLSNPKKRFKIDKNAKQLHLTGFCLPGPKPGIIVVEGGEKSIKEYKKLMLRRIKWNEPKKITVREEEDEEDDS 80 (128)
T ss_pred CEEEEeCcccCHHHHHHHHHHHHHhCCeEEEEEcCCcEEEEEECCHHHHHHHHHHHhceecccccccccccccccccccc
Confidence 68999999999999999999999999999999999999999999999999999999999999987654433333333347
Q ss_pred CCeeEEEEeeecCCCCCCCeeEEecCCHHHHHHHHHhcCchhHHHHHh
Q 006926 572 VNKCVLVWQGNVARPSFNRFFVHECMTEAAAKKVFADAGVAHYWDLAV 619 (625)
Q Consensus 572 ~N~C~LVWEG~vk~r~F~~w~~k~c~te~~Are~L~k~~~ehYWdlA~ 619 (625)
+|+|.|||||++..++|++|+++.|.|+.+|+++|+++|++||||+|+
T Consensus 81 ~n~c~~vweg~~~~r~F~~~~~~~~~~~~~~~~~L~~~~~~~~~~~a~ 128 (128)
T PF06544_consen 81 DNSCSLVWEGTVKKRAFKGFREKECEDESEARKFLREHGLEHYFDLAL 128 (128)
T ss_pred CCceeEEEeccccccCCCCceEEeCCCHHHHHHHHHHCCCHHHHHhhC
Confidence 999999999999999999999999999999999999999999999985
No 4
>PF04940 BLUF: Sensors of blue-light using FAD; InterPro: IPR007024 An FAD-binding domain, BLUF, exemplified by the N terminus of the AppA protein, (Q53119 from SWISSPROT), from Rhodobacter sphaeroides, is present in various proteins, primarily from Bacteria. The BLUF domain is involved in sensing blue-light (and possibly redox) using FAD and is similar to the flavin-binding PAS domains and cryptochromes. The predicted secondary structure reveals that the BLUF domain is a novel FAD-binding fold [].; PDB: 2IYG_A 2IYI_B 1X0P_A 2HFN_G 3MZI_A 2HFO_E 3GFZ_A 3GG1_B 2KB2_A 3GFY_A ....
Probab=95.57 E-value=0.016 Score=51.38 Aligned_cols=66 Identities=20% Similarity=0.356 Sum_probs=54.4
Q ss_pred ccccccccceeEEEEcCCceEEEEecchhHHHHHhhhhhhccCccccccccCcCccccCCCCCCeeEEEEeeecCCCCCC
Q 006926 510 DVNAHENRLTGCAVICEGINVVVVEGGSKSIKRYGKLMLRRIDWAKAVKEEDEDEDETTDKPVNKCVLVWQGNVARPSFN 589 (625)
Q Consensus 510 d~NAqQl~LTG~~li~~~~nlVVVEGG~KsiKkYkkLMl~RIkW~e~~~~~d~~~~e~~d~~~N~C~LVWEG~vk~r~F~ 589 (625)
..|-.++++||+.++..+.-+=|+||.+.++.. +..||.= |..-..|..+-.|++..|.|.
T Consensus 27 ~~~N~~~~iTG~Ll~~~~~F~Q~LEG~~~~v~~----l~~rI~~---------------D~RH~~v~~l~~~~i~~R~F~ 87 (93)
T PF04940_consen 27 RRNNRRHGITGFLLYDGGHFFQVLEGPEEAVDA----LFERIKQ---------------DPRHSNVVVLFRGPIEERRFP 87 (93)
T ss_dssp HHHHHHHTEEEEEEEETTEEEEEEEEEHHHHHH----HHHHHHT----------------TTEEEEEEEEEEEESS-SST
T ss_pred HHhhhhcCCEEEEEEeCCEEEEEEECCHHHHHH----HHHHHhc---------------CCCcCCeEEEEeeecCCccCC
Confidence 346678999999999999999999999999987 4577762 233457999999999999999
Q ss_pred CeeEE
Q 006926 590 RFFVH 594 (625)
Q Consensus 590 ~w~~k 594 (625)
+|.|.
T Consensus 88 ~W~M~ 92 (93)
T PF04940_consen 88 DWSMG 92 (93)
T ss_dssp SCSSE
T ss_pred CCcCC
Confidence 99986
No 5
>PRK14441 acylphosphatase; Provisional
Probab=69.04 E-value=4.8 Score=35.84 Aligned_cols=45 Identities=13% Similarity=0.078 Sum_probs=36.5
Q ss_pred ccccccccccccccceeEEE-EcCCceEEEEecchhHHHHHhhhhh
Q 006926 504 KTRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLML 548 (625)
Q Consensus 504 ~hrFKVd~NAqQl~LTG~~l-i~~~~nlVVVEGG~KsiKkYkkLMl 548 (625)
--|+-+...|.+|+|+|-|- ..++-=.|+++|.+.++..|..++.
T Consensus 19 GFR~~v~~~A~~lgL~G~V~N~~dG~Vei~~qG~~~~i~~f~~~l~ 64 (93)
T PRK14441 19 AFRQSAADEARRLGVEGWVRNLPDGRVEAEAEGERAAVGALVRWCH 64 (93)
T ss_pred cchHHHHHHHhhcCcEEEEEECCCCEEEEEEEECHHHHHHHHHHHh
Confidence 35777888999999999885 5556457889999999999887763
No 6
>PRK14432 acylphosphatase; Provisional
Probab=69.01 E-value=4.8 Score=35.95 Aligned_cols=45 Identities=22% Similarity=0.343 Sum_probs=35.5
Q ss_pred cccccccccccccceeEEE-EcCCceEEEEe-cchhHHHHHhhhhhh
Q 006926 505 TRFKVDVNAHENRLTGCAV-ICEGINVVVVE-GGSKSIKRYGKLMLR 549 (625)
Q Consensus 505 hrFKVd~NAqQl~LTG~~l-i~~~~nlVVVE-GG~KsiKkYkkLMl~ 549 (625)
-|+-|..-|++++|+|.|. +.++-=-|+++ |.+.++..|.+++.+
T Consensus 17 FR~~v~~~A~~lgl~G~V~N~~dG~Vei~~~~G~~~~v~~f~~~l~~ 63 (93)
T PRK14432 17 FRFFTEQIANNMKLKGFVKNLNDGRVEIVAFFNTKEQMKKFEKLLKN 63 (93)
T ss_pred ehHHHHHHHHHhCCEEEEEECCCCCEEEEEEECCHHHHHHHHHHHHh
Confidence 4667788899999999885 55664467777 999999999886654
No 7
>PRK14452 acylphosphatase; Provisional
Probab=68.93 E-value=4.6 Score=37.19 Aligned_cols=50 Identities=18% Similarity=0.117 Sum_probs=39.9
Q ss_pred CCCccccccccccccccceeEEE-EcCCceEEEEecchhHHHHHhhhhhhc
Q 006926 501 SHPKTRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLMLRR 550 (625)
Q Consensus 501 snP~hrFKVd~NAqQl~LTG~~l-i~~~~nlVVVEGG~KsiKkYkkLMl~R 550 (625)
.-=--|+-+...|.+++|+|-|. +.++-=.|+++|.+.++..|.+|+.+-
T Consensus 31 QGVGFR~~v~~~A~~lgL~G~V~N~~dGsVeI~~qG~~~~ve~F~~~l~~g 81 (107)
T PRK14452 31 QGVGFRASCCRRALDLGLSGWVRNLSDGSVEVQAEGPPLALSELRAWCERG 81 (107)
T ss_pred cCcChhHHHHHHHHHhCCEEEEEECCCCCEEEEEEcCHHHHHHHHHHHhcC
Confidence 33456888999999999999885 555645788899999999997777553
No 8
>PRK14430 acylphosphatase; Provisional
Probab=68.90 E-value=4.6 Score=35.98 Aligned_cols=44 Identities=18% Similarity=0.188 Sum_probs=37.0
Q ss_pred ccccccccccccccceeEEE-EcCCceEEEEecchhHHHHHhhhh
Q 006926 504 KTRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLM 547 (625)
Q Consensus 504 ~hrFKVd~NAqQl~LTG~~l-i~~~~nlVVVEGG~KsiKkYkkLM 547 (625)
-.|+-+...|++|+|+|.|. +.++-=-|+++|.+.++..|..++
T Consensus 18 GFR~~~~~~A~~lgl~G~VrN~~dGsVei~~qG~~~~i~~f~~~l 62 (92)
T PRK14430 18 GYRAACADAADDLGLGGWVRNRADGTVEVMASGTVRQLEALRAWM 62 (92)
T ss_pred eeHHHHHHHHHHhCCEEEEEECCCCcEEEEEEcCHHHHHHHHHHH
Confidence 35788889999999999985 556656799999999999987776
No 9
>PRK14436 acylphosphatase; Provisional
Probab=68.21 E-value=4.9 Score=35.70 Aligned_cols=46 Identities=15% Similarity=0.211 Sum_probs=37.7
Q ss_pred ccccccccccccccceeEEE-EcCCceEEEEecchhHHHHHhhhhhh
Q 006926 504 KTRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLMLR 549 (625)
Q Consensus 504 ~hrFKVd~NAqQl~LTG~~l-i~~~~nlVVVEGG~KsiKkYkkLMl~ 549 (625)
-.|+-+..-|.+++|+|.|. +.++-=-|+++|.+.++..|.+++.+
T Consensus 18 GFR~~v~~~A~~l~l~G~V~N~~dG~Vei~~qG~~~~i~~f~~~l~~ 64 (91)
T PRK14436 18 GFRWSMQREARKLGVNGWVRNLPDGSVEAVLEGDEERVEALIGWAHQ 64 (91)
T ss_pred CcHHHHHHHHHHcCCEEEEEECCCCcEEEEEEcCHHHHHHHHHHHhh
Confidence 35778888999999999885 56664578889999999999887754
No 10
>PRK14421 acylphosphatase; Provisional
Probab=68.08 E-value=4.9 Score=36.46 Aligned_cols=45 Identities=16% Similarity=0.040 Sum_probs=36.9
Q ss_pred ccccccccccccccceeEEE-EcCCceEEEEecchhHHHHHhhhhh
Q 006926 504 KTRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLML 548 (625)
Q Consensus 504 ~hrFKVd~NAqQl~LTG~~l-i~~~~nlVVVEGG~KsiKkYkkLMl 548 (625)
--|+=|...|.+++|+|.|. +.++-=.|+|+|.+.++..|.+.+.
T Consensus 18 GFR~fv~~~A~~lgL~G~V~N~~dG~Vei~~~G~~~~i~~f~~~l~ 63 (99)
T PRK14421 18 GYRAWVARTAEALGLEGWVRNRRDGSVEALFAGPADAVAEMIARCR 63 (99)
T ss_pred cchHHHHHHHHHhCCEEEEEECCCCEEEEEEeCCHHHHHHHHHHHH
Confidence 35777888999999999886 5566457889999999999887764
No 11
>PRK14424 acylphosphatase; Provisional
Probab=67.37 E-value=4.9 Score=36.06 Aligned_cols=46 Identities=20% Similarity=0.219 Sum_probs=38.5
Q ss_pred CccccccccccccccceeEEE-EcCCceEEEEecchhHHHHHhhhhh
Q 006926 503 PKTRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLML 548 (625)
Q Consensus 503 P~hrFKVd~NAqQl~LTG~~l-i~~~~nlVVVEGG~KsiKkYkkLMl 548 (625)
=-.|+-|...|.+++|+|.|- +.++-=-|+++|.+.++..|.+.+.
T Consensus 20 VGFR~~v~~~A~~~gl~G~V~N~~dG~Vei~~qG~~~~v~~f~~~l~ 66 (94)
T PRK14424 20 VGFRHATVREAHALGLRGWVANLEDGTVEAMIQGPAAQIDRMLAWLR 66 (94)
T ss_pred CchHHHHHHHHHHcCCeEEEEECCCCCEEEEEEECHHHHHHHHHHHH
Confidence 356788889999999999885 5556568999999999999988874
No 12
>PRK14445 acylphosphatase; Provisional
Probab=67.31 E-value=5.6 Score=35.18 Aligned_cols=45 Identities=24% Similarity=0.224 Sum_probs=37.0
Q ss_pred ccccccccccccccceeEEE-EcCCceEEEEecchhHHHHHhhhhh
Q 006926 504 KTRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLML 548 (625)
Q Consensus 504 ~hrFKVd~NAqQl~LTG~~l-i~~~~nlVVVEGG~KsiKkYkkLMl 548 (625)
-.|+-+..-|.+++|+|.|. +.++-=-|+++|.+.++..|...+.
T Consensus 18 GFR~~v~~~A~~~gl~G~V~N~~dG~Vei~~qG~~~~l~~f~~~l~ 63 (91)
T PRK14445 18 GFRMFIDRAASELNLSGWVRNLPDGTVEIEAQGSSGMIDELIKQAE 63 (91)
T ss_pred CChHHHHHHHhhCCCEEEEEECCCCeEEEEEEECHHHHHHHHHHHH
Confidence 35777888999999999885 5566457889999999999988774
No 13
>PRK14429 acylphosphatase; Provisional
Probab=66.10 E-value=5.5 Score=35.16 Aligned_cols=46 Identities=13% Similarity=0.093 Sum_probs=37.6
Q ss_pred cccccccccccccceeEEE-EcCCceEEEEecchhHHHHHhhhhhhc
Q 006926 505 TRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLMLRR 550 (625)
Q Consensus 505 hrFKVd~NAqQl~LTG~~l-i~~~~nlVVVEGG~KsiKkYkkLMl~R 550 (625)
-|+-+..-|++++|+|.|. +.++-=.|+++|.+.++..|...+.+.
T Consensus 17 FR~~v~~~A~~~gl~G~V~N~~dG~Vei~~qG~~~~i~~f~~~l~~g 63 (90)
T PRK14429 17 CRRATLTKARALGVTGYVTNCEDGSVEILAQGSDPAVDNLIAWCEVG 63 (90)
T ss_pred eHHHHHHHHHHhCCEEEEEECCCCeEEEEEEeCHHHHHHHHHHHhhC
Confidence 4677778899999999885 555645789999999999998887654
No 14
>PRK14449 acylphosphatase; Provisional
Probab=66.04 E-value=5.5 Score=35.17 Aligned_cols=45 Identities=29% Similarity=0.359 Sum_probs=37.6
Q ss_pred cccccccccccccceeEEE-EcCCceEEEEecchhHHHHHhhhhhh
Q 006926 505 TRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLMLR 549 (625)
Q Consensus 505 hrFKVd~NAqQl~LTG~~l-i~~~~nlVVVEGG~KsiKkYkkLMl~ 549 (625)
-|+-|...|.+++|+|.|. +.++-=.|+++|.+.++..|.+.+..
T Consensus 18 FR~fv~~~A~~lgl~G~V~N~~dG~Vei~~~G~~~~v~~f~~~l~~ 63 (90)
T PRK14449 18 LRYSVYQKAVSLGITGYAENLYDGSVEVVAEGDEENIKELINFIKT 63 (90)
T ss_pred hHHHHHHHHHHcCCEEEEEECCCCeEEEEEEeCHHHHHHHHHHHhh
Confidence 5777888999999999885 55665689999999999999888754
No 15
>PRK14420 acylphosphatase; Provisional
Probab=65.64 E-value=5.9 Score=34.87 Aligned_cols=46 Identities=20% Similarity=0.317 Sum_probs=37.6
Q ss_pred cccccccccccccceeEEE-EcCCceEEEEecchhHHHHHhhhhhhc
Q 006926 505 TRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLMLRR 550 (625)
Q Consensus 505 hrFKVd~NAqQl~LTG~~l-i~~~~nlVVVEGG~KsiKkYkkLMl~R 550 (625)
-|+-+...|.+++|+|.|- +.++-=-|+++|.+.++..|...+..-
T Consensus 17 FR~~~~~~A~~~gl~G~V~N~~dG~Vei~~qG~~~~i~~f~~~l~~~ 63 (91)
T PRK14420 17 FRYFVQMEADKRKLTGWVKNRDDGTVEIEAEGPEEALQLFLDAIEKG 63 (91)
T ss_pred ChHHHHHHHHHcCCEEEEEECCCCcEEEEEEECHHHHHHHHHHHHhC
Confidence 4677888999999999985 455546899999999999998877653
No 16
>PRK14426 acylphosphatase; Provisional
Probab=65.18 E-value=5.9 Score=35.17 Aligned_cols=46 Identities=22% Similarity=0.256 Sum_probs=37.3
Q ss_pred CccccccccccccccceeEEE-EcCCceEEEEecchhHHHHHhhhhh
Q 006926 503 PKTRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLML 548 (625)
Q Consensus 503 P~hrFKVd~NAqQl~LTG~~l-i~~~~nlVVVEGG~KsiKkYkkLMl 548 (625)
=-.|+-|..-|.+++|+|.|. +.++-=-|+++|.+..+..|.+.+-
T Consensus 17 VGFR~~v~~~A~~~gl~G~V~N~~dG~Vei~~~G~~~~i~~f~~~l~ 63 (92)
T PRK14426 17 VGFRYHTQHEALKLGLTGYAKNLDDGSVEVVACGEEEQVEKLMEWLK 63 (92)
T ss_pred cCchHHHHHHHHHhCCEEEEEECCCCcEEEEEEeCHHHHHHHHHHHh
Confidence 346788888999999999985 4555457888999999999988774
No 17
>PRK14427 acylphosphatase; Provisional
Probab=64.61 E-value=6.4 Score=35.17 Aligned_cols=46 Identities=22% Similarity=0.256 Sum_probs=37.7
Q ss_pred ccccccccccccccceeEEE-EcCCceEEEEecchhHHHHHhhhhhh
Q 006926 504 KTRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLMLR 549 (625)
Q Consensus 504 ~hrFKVd~NAqQl~LTG~~l-i~~~~nlVVVEGG~KsiKkYkkLMl~ 549 (625)
-.|+=|...|.+++|+|.|. +.++-=-|+++|.+.++..|...+..
T Consensus 20 GFR~fv~~~A~~lgl~G~V~N~~dGsVei~~qG~~~~i~~f~~~l~~ 66 (94)
T PRK14427 20 GFRYWTMRKAEELGLTGTVRNLDDGSVALVAEGTGEQVEKLLDWLNS 66 (94)
T ss_pred CChHHHHHHHHHcCCEEEEEECCCCeEEEEEEECHHHHHHHHHHHhh
Confidence 45788889999999999885 55564578899999999999877764
No 18
>PRK14435 acylphosphatase; Provisional
Probab=64.49 E-value=6.1 Score=34.98 Aligned_cols=44 Identities=16% Similarity=0.277 Sum_probs=36.4
Q ss_pred cccccccccccccceeEEE-EcCCceEEEEecchhHHHHHhhhhh
Q 006926 505 TRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLML 548 (625)
Q Consensus 505 hrFKVd~NAqQl~LTG~~l-i~~~~nlVVVEGG~KsiKkYkkLMl 548 (625)
-|+-|...|.+++|+|.|. +.++-=-|+++|.+..+..|.+.+.
T Consensus 17 FR~~v~~~A~~~gl~G~V~N~~dG~Vei~~~G~~~~i~~f~~~l~ 61 (90)
T PRK14435 17 FRYFTRRVAKSLGVKGYVMNMDDGSVFIHAEGDENALRRFLNEVA 61 (90)
T ss_pred ChHHHHHHHHHhCCEEEEEECCCCCEEEEEEECHHHHHHHHHHHh
Confidence 5777888999999999886 4455457889999999999888774
No 19
>PRK14440 acylphosphatase; Provisional
Probab=64.23 E-value=6.5 Score=34.84 Aligned_cols=44 Identities=23% Similarity=0.230 Sum_probs=35.5
Q ss_pred cccccccccccccceeEEE-EcCCceEEEEecchhHHHHHhhhhh
Q 006926 505 TRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLML 548 (625)
Q Consensus 505 hrFKVd~NAqQl~LTG~~l-i~~~~nlVVVEGG~KsiKkYkkLMl 548 (625)
-|+-+...|.+++|+|.|. +.++-=-|+++|.+.++..|.+.+.
T Consensus 18 FR~~v~~~A~~~gl~G~V~N~~dG~Vei~~~G~~~~v~~f~~~l~ 62 (90)
T PRK14440 18 FRKFVQIHAIRLGIKGYAKNLPDGSVEVVAEGYEEALSKLLERIK 62 (90)
T ss_pred chHHHHHHHHHcCCEEEEEECCCCCEEEEEEcCHHHHHHHHHHHh
Confidence 5777888999999999875 5555457889999999999876664
No 20
>PRK14448 acylphosphatase; Provisional
Probab=64.01 E-value=6.3 Score=34.89 Aligned_cols=44 Identities=18% Similarity=0.182 Sum_probs=36.7
Q ss_pred cccccccccccccceeEEE-EcCCceEEEEecchhHHHHHhhhhh
Q 006926 505 TRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLML 548 (625)
Q Consensus 505 hrFKVd~NAqQl~LTG~~l-i~~~~nlVVVEGG~KsiKkYkkLMl 548 (625)
.|+-|...|.+++|+|.|. +.++-=-|+++|.+.++..|.+.+.
T Consensus 17 FR~~v~~~A~~lgl~G~V~N~~dG~Vei~~~G~~~~v~~f~~~l~ 61 (90)
T PRK14448 17 FRYFTWQEATKIGIKGYVKNRPDGSVEVVAVGSDAQIAAFRDWLQ 61 (90)
T ss_pred hHHHHHHHHHHhCCEEEEEECCCCCEEEEEEeCHHHHHHHHHHHH
Confidence 5777888999999999885 5555457899999999999988774
No 21
>PF00708 Acylphosphatase: Acylphosphatase; InterPro: IPR001792 Acylphosphatase (3.6.1.7 from EC) is an enzyme of approximately 98 amino acid residues that specifically catalyses the hydrolysis of the carboxyl-phosphate bond of acylphosphates [], its substrates including 1,3-diphosphoglycerate and carbamyl phosphate []. The enzyme has a mainly beta-sheet structure with 2 short alpha-helical segments. It is distributed in a tissue-specific manner in a wide variety of species, although its physiological role is as yet unknown []: it may, however, play a part in the regulation of the glycolytic pathway and pyrimidine biosynthesis []. There are two known isozymes. One seems to be specific to muscular tissues, the other, called 'organ-common type', is found in many different tissues. While bacterial and archebacterial hypothetical proteins that are highly similar to that enzyme and that probably possess the same activity. These proteins include: Escherichia coli putative acylphosphatase (3.6.1.7 from EC) (acylphosphate phosphohydrolase) (gene yccX). Bacillus subtilis putative acylphosphatase (3.6.1.7 from EC) (acylphosphate phosphohydrolase) (gene yflL). Archaeoglobus fulgidus putative acylphosphatase (3.6.1.7 from EC) (acylphosphate phosphohydrolase) (O29440 from SWISSPROT). An acylphosphatase-like domain is also found in some prokaryotic hydrogenase maturation HypF carbamoyltransferases [, ].; PDB: 1APS_A 1GXT_A 1GXU_A 2HLT_A 2FHM_A 2HLU_A 3BR8_A 1ULR_A 3TRG_A 2BJD_A ....
Probab=63.31 E-value=6.5 Score=34.24 Aligned_cols=53 Identities=19% Similarity=0.114 Sum_probs=40.6
Q ss_pred CCCccccccccccccccceeEEE-EcCCceEEEEecchhHHHHHhhhhhhccCc
Q 006926 501 SHPKTRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLMLRRIDW 553 (625)
Q Consensus 501 snP~hrFKVd~NAqQl~LTG~~l-i~~~~nlVVVEGG~KsiKkYkkLMl~RIkW 553 (625)
..=-.|+-|..-|.+++|+|.|. +.++--.|+++|.+..+..|.+.+..--.+
T Consensus 15 QGVgFR~~v~~~A~~~gl~G~V~N~~dg~V~i~~~G~~~~l~~f~~~l~~g~p~ 68 (91)
T PF00708_consen 15 QGVGFRPFVKRIARKLGLTGWVRNLPDGSVEIEAEGEEEQLEEFIKWLKKGPPP 68 (91)
T ss_dssp SSSSHHHHHHHHHHHTT-EEEEEE-TTSEEEEEEEEEHHHHHHHHHHHHHSSTT
T ss_pred CcCChhHHHHHHHHHhCCceEEEECCCCEEEEEEEeCHHHHHHHHHHHHhCCCC
Confidence 34446777888899999999885 566657899999999999998888775433
No 22
>PRK14442 acylphosphatase; Provisional
Probab=63.19 E-value=7.5 Score=34.49 Aligned_cols=45 Identities=22% Similarity=0.175 Sum_probs=36.9
Q ss_pred ccccccccccccccceeEEE-EcCCceEEEEecchhHHHHHhhhhh
Q 006926 504 KTRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLML 548 (625)
Q Consensus 504 ~hrFKVd~NAqQl~LTG~~l-i~~~~nlVVVEGG~KsiKkYkkLMl 548 (625)
--|+=+..-|.+++|+|-|- +.++-=-|+++|.+.++..|.+++.
T Consensus 18 GFR~~~~~~A~~~gl~G~V~N~~dG~Vei~~qG~~~~i~~f~~~l~ 63 (91)
T PRK14442 18 GFRQATREEADRLELDGWVRNLDDGRVEVVWEGEEDRAKALERWLG 63 (91)
T ss_pred cccHHHHHHHHHcCCEEEEEECCCCCEEEEEEcCHHHHHHHHHHHh
Confidence 35677788899999999885 6666457888999999999988874
No 23
>PRK14437 acylphosphatase; Provisional
Probab=61.14 E-value=7.5 Score=35.88 Aligned_cols=48 Identities=25% Similarity=0.171 Sum_probs=39.0
Q ss_pred CCCccccccccccccccceeEEE-EcCCceEEEEecchhHHHHHhhhhh
Q 006926 501 SHPKTRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLML 548 (625)
Q Consensus 501 snP~hrFKVd~NAqQl~LTG~~l-i~~~~nlVVVEGG~KsiKkYkkLMl 548 (625)
.-=-.|+=+...|++++|+|.|. +.++-=.|+|+|.+.++..|..++-
T Consensus 34 QGVGFR~fv~~~A~~lgL~G~V~N~~dG~Vei~~qG~~~~ie~f~~~L~ 82 (109)
T PRK14437 34 QGVFFRESVRKKAEELQLTGWVKNLSHGDVELVACGERDSIMILTEWLW 82 (109)
T ss_pred CCcCchHHHHHHHHHhCCeEEEEECCCCCEEEEEEECHHHHHHHHHHHH
Confidence 44457888999999999999885 6666467888999999999877773
No 24
>PRK14422 acylphosphatase; Provisional
Probab=61.11 E-value=8.3 Score=34.41 Aligned_cols=47 Identities=28% Similarity=0.285 Sum_probs=38.2
Q ss_pred CccccccccccccccceeEEE-EcCCceEEEEecchhHHHHHhhhhhh
Q 006926 503 PKTRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLMLR 549 (625)
Q Consensus 503 P~hrFKVd~NAqQl~LTG~~l-i~~~~nlVVVEGG~KsiKkYkkLMl~ 549 (625)
=-.|+=+..-|.+++|+|.|- +.++-=-|+++|.+.++..|.+.+..
T Consensus 19 VGFR~~v~~~A~~~gl~G~V~N~~dG~Vei~~~G~~~~i~~f~~~l~~ 66 (93)
T PRK14422 19 VGFRWWTRSRALELGLTGYAANLADGRVQVVAEGPRAACEKLLQLLRG 66 (93)
T ss_pred cCcHHHHHHHHHHcCCEEEEEECCCCCEEEEEEcCHHHHHHHHHHHHh
Confidence 346778888999999999885 66664578899999999999887764
No 25
>PRK10455 periplasmic protein; Reviewed
Probab=60.91 E-value=42 Score=33.02 Aligned_cols=75 Identities=20% Similarity=0.402 Sum_probs=40.3
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhhhhhhhccccCCCChHHHHHHHHHHHHHHHHHHHHH
Q 006926 384 QPLKLTKKEQKKLRTQRRLAREKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTRLEKEIRSAAAEREQAHIDRN 463 (625)
Q Consensus 384 ~plyLTKKEqKKLRRqrR~e~~KEkQdKIRLGL~PPPpPKVKLSNLMrVLg~eAV~DPTkvEa~VR~QmeeR~~~He~~N 463 (625)
..|-||...|.+||...+..+..-++ | .+--...|+.++..+.+ | |+.||.++++..+.|.++=
T Consensus 53 ~~L~LT~~Qrqqir~im~~~r~~~~~----------~-~~~~r~~l~~li~ad~F-D----eaavra~~~k~~~~~~~~~ 116 (161)
T PRK10455 53 KGLNLTDAQKQQIRDIMKAQRDQMKR----------P-PLEERRAMHDIIASDTF-D----KAKAEAQITKMEAQRKARM 116 (161)
T ss_pred hhCCCCHHHHHHHHHHHHHHHHhhcc----------c-cHHHHHHHHHHHccCcc-C----HHHHHHHHHHHHHHHHHHH
Confidence 45899999999999766654433210 0 11122345555555432 3 4555555554333333222
Q ss_pred Hh---------ccCCHHHHH
Q 006926 464 IA---------RKLTPAERR 474 (625)
Q Consensus 464 ee---------RKLT~EqRr 474 (625)
.+ --||||||.
T Consensus 117 ~~~~~~~~qiy~vLTPEQr~ 136 (161)
T PRK10455 117 LAHMETQNKIYNVLTPEQKK 136 (161)
T ss_pred HHHHHHHHHHHHhCCHHHHH
Confidence 22 269999985
No 26
>PRK10363 cpxP periplasmic repressor CpxP; Reviewed
Probab=60.78 E-value=43 Score=33.45 Aligned_cols=77 Identities=21% Similarity=0.336 Sum_probs=46.9
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhhhhhhhccccCCCChHHHHHHHHHHHHHHHHHHH
Q 006926 382 PPQPLKLTKKEQKKLRTQRRLAREKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTRLEKEIRSAAAEREQAHID 461 (625)
Q Consensus 382 ~~~plyLTKKEqKKLRRqrR~e~~KEkQdKIRLGL~PPPpPKVKLSNLMrVLg~eAV~DPTkvEa~VR~QmeeR~~~He~ 461 (625)
....|-||...|..||-..+..+.. .++ ..---..-|-.++..+.+ =|+.||.|+++..+++.+
T Consensus 45 MF~gLdLTdaQRqQmRdLm~~~r~~----------~~~-~~~~er~amh~LI~ad~F-----DEaavra~a~kma~~~~e 108 (166)
T PRK10363 45 MFDGISLTEHQRQQMRDLMQQARHE----------QPP-VNVSEMETMHRLVTAENF-----DENAVRAQAEKMAQEQVA 108 (166)
T ss_pred cccCCCCCHHHHHHHHHHHHHHHhc----------ccc-cCHHHHHHHHHHHhcCCC-----CHHHHHHHHHHHHHHHHH
Confidence 3467999998888888776554431 111 111123334455655554 366777777777666666
Q ss_pred HHHhc---------cCCHHHHH
Q 006926 462 RNIAR---------KLTPAERR 474 (625)
Q Consensus 462 ~NeeR---------KLT~EqRr 474 (625)
+-.+| =|||||+.
T Consensus 109 ~~Vem~k~~nqmy~lLTPEQKa 130 (166)
T PRK10363 109 RQVEMAKVRNQMYRLLTPEQQA 130 (166)
T ss_pred HHHHHHHHHHHHHHhCCHHHHH
Confidence 65554 49999973
No 27
>PRK14433 acylphosphatase; Provisional
Probab=59.87 E-value=8.8 Score=33.82 Aligned_cols=44 Identities=30% Similarity=0.332 Sum_probs=35.7
Q ss_pred cccccccccccccceeEEE-EcCCceEEEEecchhHHHHHhhhhh
Q 006926 505 TRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLML 548 (625)
Q Consensus 505 hrFKVd~NAqQl~LTG~~l-i~~~~nlVVVEGG~KsiKkYkkLMl 548 (625)
.|+=|-..|.+++|+|.|. +.++-=-|+++|.+.++..|.+.+.
T Consensus 16 FR~~v~~~A~~~~l~G~V~N~~dG~Vei~~~G~~~~i~~f~~~l~ 60 (87)
T PRK14433 16 YRAFVQKKARELGLSGYAENLSDGRVEVVAEGPKEALERLLHWLR 60 (87)
T ss_pred chHHHHHHHHHcCCEEEEEECCCCCEEEEEEECHHHHHHHHHHHh
Confidence 4666778899999999875 5566457889999999999888774
No 28
>PRK14451 acylphosphatase; Provisional
Probab=59.76 E-value=8.5 Score=34.08 Aligned_cols=46 Identities=15% Similarity=0.180 Sum_probs=37.7
Q ss_pred ccccccccccccccceeEEE-EcCCceEEEEecchhHHHHHhhhhhh
Q 006926 504 KTRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLMLR 549 (625)
Q Consensus 504 ~hrFKVd~NAqQl~LTG~~l-i~~~~nlVVVEGG~KsiKkYkkLMl~ 549 (625)
--|+-+...|.+++|+|-|- +.++-=-|+++|.+.++..|..++.+
T Consensus 17 GFR~~~~~~A~~~gl~G~V~N~~dG~Vei~~qG~~~~i~~f~~~l~~ 63 (89)
T PRK14451 17 WFRASAKKLAEQLMISGWARNLADGRVEVFACGKEDKLEEFYTWLQK 63 (89)
T ss_pred CchHHHHHHHHHhCCEEEEEECCCCCEEEEEEECHHHHHHHHHHHhh
Confidence 35777888999999999885 66665578889999999998887753
No 29
>PRK14438 acylphosphatase; Provisional
Probab=58.94 E-value=9.2 Score=33.90 Aligned_cols=43 Identities=14% Similarity=0.132 Sum_probs=34.9
Q ss_pred cccccccccccccceeEEE-EcCCceEEEEecchhHHHHHhhhh
Q 006926 505 TRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLM 547 (625)
Q Consensus 505 hrFKVd~NAqQl~LTG~~l-i~~~~nlVVVEGG~KsiKkYkkLM 547 (625)
-|+=+...|.+++|+|-|. +.++-=.|+++|.+.++..|.+.+
T Consensus 18 FR~~~~~~A~~~gl~G~V~N~~dG~Vei~~qG~~~~i~~f~~~l 61 (91)
T PRK14438 18 FRHHTQQTAQRLNVSGWVKNLPNGSVQGCFEGEETDVAALIDWC 61 (91)
T ss_pred ccHHHHHHHHHcCCEEEEEECCCCEEEEEEEECHHHHHHHHHHH
Confidence 4666778899999999885 555545789999999999987766
No 30
>PRK14423 acylphosphatase; Provisional
Probab=58.07 E-value=9.7 Score=33.81 Aligned_cols=46 Identities=17% Similarity=0.142 Sum_probs=36.9
Q ss_pred cccccccccccccceeEEE-EcCCceEEEEecchhHHHHHhhhhhhc
Q 006926 505 TRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLMLRR 550 (625)
Q Consensus 505 hrFKVd~NAqQl~LTG~~l-i~~~~nlVVVEGG~KsiKkYkkLMl~R 550 (625)
-|+=|...|++++|+|.+. +.++-=.|+++|.+.++..|..++.+.
T Consensus 20 FR~~v~~~A~~lgl~G~V~N~~dG~Vei~~~G~~~~i~~f~~~l~~g 66 (92)
T PRK14423 20 YRASTRDTARELGVDGWVRNLDDGRVEAVFEGPRDAVEAMVEWCHEG 66 (92)
T ss_pred ehHHHHHHHHHcCCEEEEEECCCCeEEEEEEECHHHHHHHHHHHHhC
Confidence 4677788899999999985 556644788999999999987777644
No 31
>PRK14450 acylphosphatase; Provisional
Probab=57.68 E-value=9.8 Score=33.60 Aligned_cols=43 Identities=28% Similarity=0.288 Sum_probs=34.5
Q ss_pred cccccccccccccceeEEE-EcCCc-eEEEEecchhHHHHHhhhh
Q 006926 505 TRFKVDVNAHENRLTGCAV-ICEGI-NVVVVEGGSKSIKRYGKLM 547 (625)
Q Consensus 505 hrFKVd~NAqQl~LTG~~l-i~~~~-nlVVVEGG~KsiKkYkkLM 547 (625)
.|+-+...|.+++|+|.|. +.++- =-|+++|.+.++..|...+
T Consensus 17 FR~~v~~~A~~~~l~G~V~N~~dG~~Vei~~~G~~~~v~~f~~~l 61 (91)
T PRK14450 17 FRDFTRTQATRLGLCGYAKNLANGNEVEVVAEGDKDSLLEFLDLL 61 (91)
T ss_pred cHHHHHHHHHHcCCEEEEEECCCCCEEEEEEEeCHHHHHHHHHHH
Confidence 5677888999999999875 55652 3567999999999987776
No 32
>PRK12751 cpxP periplasmic stress adaptor protein CpxP; Reviewed
Probab=56.46 E-value=57 Score=32.27 Aligned_cols=79 Identities=15% Similarity=0.291 Sum_probs=48.8
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCccc-hhhhhhhhhccccCCCChHHHHHHHHHHHHHHHHH--
Q 006926 383 PQPLKLTKKEQKKLRTQRRLAREKDRQEMIRQGLIEPPKPKV-KMSNLMKVLGSEATQDPTRLEKEIRSAAAEREQAH-- 459 (625)
Q Consensus 383 ~~plyLTKKEqKKLRRqrR~e~~KEkQdKIRLGL~PPPpPKV-KLSNLMrVLg~eAV~DPTkvEa~VR~QmeeR~~~H-- 459 (625)
...+-||...|..||...+..+... | .+.. -..-|-.++..+. =||.+|++.+.++.+.+...+
T Consensus 52 f~~l~LTd~QR~qmr~im~~~r~~~----------~--~~~~~~~~~m~~Li~Ad~-FDeaAvra~~~kma~~~~e~~v~ 118 (162)
T PRK12751 52 FDGINLTEQQRQQMRDLMRQSHQSQ----------P--RLDLEDREAMHKLITADK-FDEAAVRAQAEKMSQNQIERHVE 118 (162)
T ss_pred hccCCCCHHHHHHHHHHHHHhhhcc----------c--chhHHHHHHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHH
Confidence 4568899999999998777665531 1 1111 1222445666655 499999888776655554333
Q ss_pred --HHHHHh-ccCCHHHHH
Q 006926 460 --IDRNIA-RKLTPAERR 474 (625)
Q Consensus 460 --e~~Nee-RKLT~EqRr 474 (625)
+.+|+- .-||||||.
T Consensus 119 ~~~~~~qmy~lLTPEQra 136 (162)
T PRK12751 119 MAKVRNQMYNLLTPEQKE 136 (162)
T ss_pred HHHHHHHHHHcCCHHHHH
Confidence 333433 359999974
No 33
>PRK14425 acylphosphatase; Provisional
Probab=56.33 E-value=11 Score=33.80 Aligned_cols=45 Identities=18% Similarity=0.092 Sum_probs=36.9
Q ss_pred ccccccccccccccceeEEE-EcCCceEEEEecchhHHHHHhhhhh
Q 006926 504 KTRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLML 548 (625)
Q Consensus 504 ~hrFKVd~NAqQl~LTG~~l-i~~~~nlVVVEGG~KsiKkYkkLMl 548 (625)
--|+-+...|++++|+|-|. +.++-=-|+++|.+.++..|.+.+.
T Consensus 20 GFR~~v~~~A~~~gl~G~V~N~~dGsVei~~qG~~~~le~f~~~l~ 65 (94)
T PRK14425 20 GFRDWTRDEAERLGLTGWVRNESDGSVTALIAGPDSAISAMIERFR 65 (94)
T ss_pred cchHHHHHHHHHhCCEEEEEECCCCeEEEEEEeCHHHHHHHHHHHh
Confidence 35788889999999999885 6666557889999999999877763
No 34
>PRK14443 acylphosphatase; Provisional
Probab=56.00 E-value=12 Score=33.71 Aligned_cols=45 Identities=9% Similarity=0.189 Sum_probs=37.5
Q ss_pred cccccccccccccceeEEE-EcCCceEEEEecchhHHHHHhhhhhh
Q 006926 505 TRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLMLR 549 (625)
Q Consensus 505 hrFKVd~NAqQl~LTG~~l-i~~~~nlVVVEGG~KsiKkYkkLMl~ 549 (625)
-|+-+...|.+++|+|-|. +.++-=.|+++|.+..+..|.+.+..
T Consensus 19 FR~~~~~~A~~~gl~G~V~N~~dG~Vei~~qG~~~~l~~f~~~l~~ 64 (93)
T PRK14443 19 FRYTTKHVAYKYDISGTVKNLDDGSVEIHAIAEEENLNKFIDAIKK 64 (93)
T ss_pred CcHHHHHHHHHcCCEEEEEECCCCEEEEEEECCHHHHHHHHHHHhc
Confidence 5777888999999999885 66775678889999999999888744
No 35
>PRK14446 acylphosphatase; Provisional
Probab=54.25 E-value=13 Score=32.97 Aligned_cols=43 Identities=21% Similarity=0.219 Sum_probs=35.0
Q ss_pred ccccccccccccceeEEE-EcCCceEEEEecchhHHHHHhhhhh
Q 006926 506 RFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLML 548 (625)
Q Consensus 506 rFKVd~NAqQl~LTG~~l-i~~~~nlVVVEGG~KsiKkYkkLMl 548 (625)
|+=+...|++++|+|-|. ..++-=.|+++|.+..+..|-.++.
T Consensus 18 R~fv~~~A~~lgl~G~V~N~~dGsVei~~qG~~~~l~~f~~~l~ 61 (88)
T PRK14446 18 RASTRERAVALGLVGHARNQADGSVEVVAAGSAAALEALEAWLW 61 (88)
T ss_pred hHHHHHHHeeCCeEEEEEECCCCCEEEEEEeCHHHHHHHHHHHh
Confidence 566777899999999886 5666468888999999999877765
No 36
>PRK14444 acylphosphatase; Provisional
Probab=53.99 E-value=12 Score=33.19 Aligned_cols=46 Identities=17% Similarity=0.205 Sum_probs=37.2
Q ss_pred ccccccccccccccceeEEE-EcCCceEEEEecchhHHHHHhhhhhh
Q 006926 504 KTRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLMLR 549 (625)
Q Consensus 504 ~hrFKVd~NAqQl~LTG~~l-i~~~~nlVVVEGG~KsiKkYkkLMl~ 549 (625)
-.|+=+..-|++|+|+|-|- +.++-=-|+++|.+..+..|...+.+
T Consensus 18 GFR~~v~~~A~~lgl~G~V~N~~dG~Vei~~qG~~~~i~~f~~~l~~ 64 (92)
T PRK14444 18 NFRAYTRDRAREAGVKGWVRNLSDGRVEAVFEGSRPAVQKMISWCYS 64 (92)
T ss_pred CcHHHHHHHHHHhCCEEEEEECCCCcEEEEEEcCHHHHHHHHHHHHh
Confidence 35677778899999999885 66664579999999999999888654
No 37
>PF13801 Metal_resist: Heavy-metal resistance; PDB: 3EPV_C 2Y3D_A 2Y3H_D 2Y3G_B 2Y3B_A 2Y39_A 3LAY_H.
Probab=53.73 E-value=86 Score=27.03 Aligned_cols=79 Identities=25% Similarity=0.297 Sum_probs=42.2
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHH--HHHHHcCCCCCCCccchhhhhhhhhccccCCCChHHHHHHHHHHHH----HHHH
Q 006926 385 PLKLTKKEQKKLRTQRRLAREKDR--QEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTRLEKEIRSAAAE----REQA 458 (625)
Q Consensus 385 plyLTKKEqKKLRRqrR~e~~KEk--QdKIRLGL~PPPpPKVKLSNLMrVLg~eAV~DPTkvEa~VR~Qmee----R~~~ 458 (625)
.+-||...+.++|...+....+-. +..++ .+-.-|...|..+ --|+-+|++.+.+-.+. +...
T Consensus 39 ~l~Lt~eQ~~~l~~~~~~~~~~~~~~r~~~~----------~~r~~l~~ll~~~-~~D~~~i~a~~~~~~~~~~~l~~~~ 107 (125)
T PF13801_consen 39 MLNLTPEQQAKLRALMDEFRQEMRALRQELR----------AARQELRALLAAP-PPDEAAIEALLEEIREAQAELRQER 107 (125)
T ss_dssp HS-TTHHHHHHHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHCCS-SS-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 367999999999976554433222 22222 2333355555554 45777887766553333 2233
Q ss_pred HHHHHHhc-cCCHHHHH
Q 006926 459 HIDRNIAR-KLTPAERR 474 (625)
Q Consensus 459 He~~NeeR-KLT~EqRr 474 (625)
+....+.+ -||||||.
T Consensus 108 ~~~~~~~~~~LtpeQR~ 124 (125)
T PF13801_consen 108 LEHLLEIRAVLTPEQRA 124 (125)
T ss_dssp HHHHHHHHHTT-GGGHH
T ss_pred HHHHHHHHHcCCHHHhC
Confidence 33334444 49999985
No 38
>PF08690 GET2: GET complex subunit GET2; InterPro: IPR014802 This family corresponds to the GET complex subunit GET2. The GET complex is involved in the retrieval of ER resident proteins from the Golgi []. ; PDB: 3SJD_D 3ZS9_C.
Probab=52.25 E-value=11 Score=40.37 Aligned_cols=26 Identities=38% Similarity=0.581 Sum_probs=20.0
Q ss_pred CCHHHHHHHHHHHHHHHHHH-----HHHHHH
Q 006926 388 LTKKEQKKLRTQRRLAREKD-----RQEMIR 413 (625)
Q Consensus 388 LTKKEqKKLRRqrR~e~~KE-----kQdKIR 413 (625)
||..|++||||.||++|-+. +=+||-
T Consensus 2 ls~aEkrRLrRERReAKi~~GgaSaRLnKIT 32 (302)
T PF08690_consen 2 LSEAEKRRLRRERREAKIKAGGASARLNKIT 32 (302)
T ss_dssp --HHHHHHHHHHHHHHHHHCCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHCCCcHHHHHHHh
Confidence 78999999999999999863 556664
No 39
>PRK14434 acylphosphatase; Provisional
Probab=48.71 E-value=17 Score=32.50 Aligned_cols=45 Identities=13% Similarity=0.156 Sum_probs=34.9
Q ss_pred ccccccccccccc-ceeEEE-EcCCceEEEEecch-hHHHHHhhhhhh
Q 006926 505 TRFKVDVNAHENR-LTGCAV-ICEGINVVVVEGGS-KSIKRYGKLMLR 549 (625)
Q Consensus 505 hrFKVd~NAqQl~-LTG~~l-i~~~~nlVVVEGG~-KsiKkYkkLMl~ 549 (625)
-|+-|...|++|+ |+|-|. ..++-=.|+++|.+ .++..|-..+.+
T Consensus 17 FR~fv~~~A~~lg~l~G~V~N~~dGsVei~~qG~~~~~l~~f~~~l~~ 64 (92)
T PRK14434 17 FRYSVYSLALEIGDIYGRVWNNDDGTVEILAQSDDSAKLAKFIQEIRK 64 (92)
T ss_pred EhHHHHHHHHHcCCcEEEEEECCCCCEEEEEEcCCHHHHHHHHHHHhc
Confidence 3667788899999 999886 55564578889987 699988776654
No 40
>PRK14439 acylphosphatase; Provisional
Probab=48.60 E-value=16 Score=36.25 Aligned_cols=46 Identities=22% Similarity=0.274 Sum_probs=38.4
Q ss_pred ccccccccccccccceeEEE-EcCCceEEEEecchhHHHHHhhhhhh
Q 006926 504 KTRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLMLR 549 (625)
Q Consensus 504 ~hrFKVd~NAqQl~LTG~~l-i~~~~nlVVVEGG~KsiKkYkkLMl~ 549 (625)
-.|+-|...|.|++|+|.|. +.++-=-|+++|.+.++..|.+.+.+
T Consensus 89 GFR~fv~~~A~qlGLtGwVrNl~DGsVEI~aQG~ee~Ie~Fi~~L~~ 135 (163)
T PRK14439 89 GFRYTTQYEAKKLGLTGYAKNLDDGSVEVVACGEEGQVEKLMQWLKS 135 (163)
T ss_pred CchHHHHHHHHHhCCEEEEEECCCCCEEEEEEcCHHHHHHHHHHHhh
Confidence 35778888999999999885 66664578889999999999888875
No 41
>PRK14428 acylphosphatase; Provisional
Probab=48.28 E-value=17 Score=32.90 Aligned_cols=46 Identities=13% Similarity=0.137 Sum_probs=37.1
Q ss_pred CccccccccccccccceeEEE-EcCCceEEEEecchhHHHHHhhhhh
Q 006926 503 PKTRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLML 548 (625)
Q Consensus 503 P~hrFKVd~NAqQl~LTG~~l-i~~~~nlVVVEGG~KsiKkYkkLMl 548 (625)
=--|+-+-.-|++++|+|.|. ..++-=.|+++|.+.++..|-..+.
T Consensus 21 VGFR~fv~~~A~~lgL~G~V~N~~dGsVei~~qG~~~~i~~fi~~l~ 67 (97)
T PRK14428 21 VGFRYFTVTQARRLGVQGWVRNCRDGSVELEAQGSSDAVQALVEQLA 67 (97)
T ss_pred ccchHHHHHHHHHcCCEEEEEECCCCEEEEEEEcCHHHHHHHHHHHh
Confidence 345777888999999999886 5566568889999999999876664
No 42
>PRK14431 acylphosphatase; Provisional
Probab=48.20 E-value=22 Score=31.49 Aligned_cols=45 Identities=11% Similarity=0.197 Sum_probs=35.1
Q ss_pred cccccccccccccceeEEEEcCCceEEEEecchhHHHHHhhhhhh
Q 006926 505 TRFKVDVNAHENRLTGCAVICEGINVVVVEGGSKSIKRYGKLMLR 549 (625)
Q Consensus 505 hrFKVd~NAqQl~LTG~~li~~~~nlVVVEGG~KsiKkYkkLMl~ 549 (625)
-|+=+..-|++++|+|-|.=.++-=.|+++|.+.++..|...+.+
T Consensus 17 FR~~~~~~A~~~gl~G~V~N~~dgVei~~qG~~~~l~~f~~~l~~ 61 (89)
T PRK14431 17 FRYFTQRIAMNYNIVGTVQNVDDYVEIYAQGDDADLERFIQGVIE 61 (89)
T ss_pred EhHHHHHHHhhcCCEEEEEECCCcEEEEEEcCHHHHHHHHHHHhc
Confidence 356677789999999988633433578899999999999777754
No 43
>COG1254 AcyP Acylphosphatases [Energy production and conversion]
Probab=46.33 E-value=19 Score=32.38 Aligned_cols=49 Identities=18% Similarity=0.238 Sum_probs=40.0
Q ss_pred CCCCccccccccccccccceeEEEEcC-CceEEEEecchhHHHHHhhhhh
Q 006926 500 LSHPKTRFKVDVNAHENRLTGCAVICE-GINVVVVEGGSKSIKRYGKLML 548 (625)
Q Consensus 500 LsnP~hrFKVd~NAqQl~LTG~~li~~-~~nlVVVEGG~KsiKkYkkLMl 548 (625)
...=-.|+-+..=|..|+|+|.+--.+ +-=-||++|-+.++.+|..++-
T Consensus 14 VQGVGFR~~~~~~A~~lgl~G~V~N~~DGsVeiva~G~~~~v~~~~~~l~ 63 (92)
T COG1254 14 VQGVGFRYFTRSEALRLGLTGWVKNLDDGSVEIVAEGPDEAVEKFIEWLR 63 (92)
T ss_pred eccccHHHHHHHHHHHCCCEEEEEECCCCeEEEEEEcCHHHHHHHHHHHH
Confidence 344456888888999999999997554 5557999999999999988876
No 44
>PRK14447 acylphosphatase; Provisional
Probab=44.91 E-value=25 Score=31.47 Aligned_cols=44 Identities=18% Similarity=0.179 Sum_probs=35.1
Q ss_pred cccccccccccccceeEEE-EcCC-ceEEEEecchhHHHHHhhhhh
Q 006926 505 TRFKVDVNAHENRLTGCAV-ICEG-INVVVVEGGSKSIKRYGKLML 548 (625)
Q Consensus 505 hrFKVd~NAqQl~LTG~~l-i~~~-~nlVVVEGG~KsiKkYkkLMl 548 (625)
.|+=+...|++++|+|.+- +.++ -=-|+++|.+.++..|-.++.
T Consensus 19 FR~~~~~~A~~~gl~G~V~N~~dG~~Vei~~qG~~~~l~~f~~~l~ 64 (95)
T PRK14447 19 FRQSMKEVANRNGVRGWVRNRSDGRTVEAVLEGPRDAVLKVIEWAR 64 (95)
T ss_pred chHHHHHHHhhcCeEEEEEECCCCCEEEEEEEeCHHHHHHHHHHHh
Confidence 5677888999999999885 5555 246778999999999877664
No 45
>KOG3360 consensus Acylphosphatase [Energy production and conversion]
Probab=39.04 E-value=56 Score=30.15 Aligned_cols=68 Identities=18% Similarity=0.240 Sum_probs=47.3
Q ss_pred cccccccceeEEEEc-CCceEEEEecchhHHHHHhhhhhhccCccccccccCcCccccCCCCCCeeEEEEeeecCCCCCC
Q 006926 511 VNAHENRLTGCAVIC-EGINVVVVEGGSKSIKRYGKLMLRRIDWAKAVKEEDEDEDETTDKPVNKCVLVWQGNVARPSFN 589 (625)
Q Consensus 511 ~NAqQl~LTG~~li~-~~~nlVVVEGG~KsiKkYkkLMl~RIkW~e~~~~~d~~~~e~~d~~~N~C~LVWEG~vk~r~F~ 589 (625)
.+|++|+|+|-|.=. ++-=-=-+||-+..+..++.|++.|=.= ...-.+|+.-=++++.+..|.
T Consensus 29 ~~a~~lGlrGWv~Nt~~GtvkG~leGp~~~vd~mk~wl~~~gsP---------------~s~I~~~ef~n~kei~~~~y~ 93 (98)
T KOG3360|consen 29 DEAKKLGLRGWVMNTSEGTVKGQLEGPPEKVDEMKEWLLTRGSP---------------VSAIDRAEFSNQKEISRYTYK 93 (98)
T ss_pred HHHHhhcceEEEEecCCceEEEEEeCCHHHHHHHHHHHHhcCCh---------------hHheeeeeecccceecccccc
Confidence 489999999999744 4443446899999999999999976211 111234555555666777777
Q ss_pred CeeE
Q 006926 590 RFFV 593 (625)
Q Consensus 590 ~w~~ 593 (625)
.|.+
T Consensus 94 ~F~I 97 (98)
T KOG3360|consen 94 DFSI 97 (98)
T ss_pred eeee
Confidence 7754
No 46
>PHA00431 internal virion protein C
Probab=27.72 E-value=45 Score=39.36 Aligned_cols=74 Identities=32% Similarity=0.411 Sum_probs=41.4
Q ss_pred chhhhhhhhhccccCCCChHHHHHHHHHHH--HHHHHHHHHHH-hccCCHHHHHHHHHhhhcCCCCCCceEEEEEEEccC
Q 006926 424 VKMSNLMKVLGSEATQDPTRLEKEIRSAAA--EREQAHIDRNI-ARKLTPAERREKKERKLFDDPSSVETIVSVYKINDL 500 (625)
Q Consensus 424 VKLSNLMrVLg~eAV~DPTkvEa~VR~Qme--eR~~~He~~Ne-eRKLT~EqRreKk~~K~~eD~~s~~v~vaVyrI~~L 500 (625)
|.=|||..-|+.=+-.- ...-.+.. .+.++.|+-|+ -|||||||||+-.. | | +.+|-=..-
T Consensus 38 ~~~s~ll~sl~~f~~aG-----~~ay~~y~~~~k~~AdERSNEIIRKLTPEQrReAi~-----n----G--TLLYQDDPY 101 (746)
T PHA00431 38 VGQSNLLESLGKFAKAG-----ADAYGAYDERRKDKADERSNEIIRKLTPEQRREAIK-----N----G--TLLYQDDPY 101 (746)
T ss_pred cCCchHHHHHHHHHHHh-----HHHHHHHHHHHHHhHhhhHHHHHHhcCHHHHHHHHh-----c----C--ceeecCCHH
Confidence 56677766665421100 01112222 33456777786 59999999987532 1 2 445554444
Q ss_pred CCCcccccccccc
Q 006926 501 SHPKTRFKVDVNA 513 (625)
Q Consensus 501 snP~hrFKVd~NA 513 (625)
.=-..|||...||
T Consensus 102 AMeALr~KtGRna 114 (746)
T PHA00431 102 AMEALRFKTGRNA 114 (746)
T ss_pred HHHHHHHHhccch
Confidence 4445678877776
No 47
>PRK12750 cpxP periplasmic repressor CpxP; Reviewed
Probab=25.64 E-value=2.9e+02 Score=27.48 Aligned_cols=17 Identities=29% Similarity=0.561 Sum_probs=12.6
Q ss_pred CCCCCCHHHHHHHHHHH
Q 006926 384 QPLKLTKKEQKKLRTQR 400 (625)
Q Consensus 384 ~plyLTKKEqKKLRRqr 400 (625)
..|-||...+.+||..+
T Consensus 49 ~~L~LTdeQk~qik~i~ 65 (170)
T PRK12750 49 RQLDLTDAQKEQLKEMR 65 (170)
T ss_pred hhCCCCHHHHHHHHHHH
Confidence 45889988888876544
No 48
>COG5154 BRX1 RNA-binding protein required for 60S ribosomal subunit biogenesis [Translation, ribosomal structure and biogenesis]
Probab=24.06 E-value=67 Score=33.55 Aligned_cols=40 Identities=25% Similarity=0.302 Sum_probs=35.1
Q ss_pred hccccCCCChHHHHHHHHHHHHHHHHHHHHHHhccCCHHH
Q 006926 433 LGSEATQDPTRLEKEIRSAAAEREQAHIDRNIARKLTPAE 472 (625)
Q Consensus 433 Lg~eAV~DPTkvEa~VR~QmeeR~~~He~~NeeRKLT~Eq 472 (625)
+.++..--||-|-+.+|.|.+|+..+..+.|.+|+.-+.|
T Consensus 231 Ykn~~~vs~~~vra~ir~qaae~~~~R~es~~er~vr~~~ 270 (283)
T COG5154 231 YKNETFVSSTMVRAAIRNQAAENLFARKESNLERQVRAQQ 270 (283)
T ss_pred eecccccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhc
Confidence 4577788899999999999999999999999999876544
No 49
>PF12396 DUF3659: Protein of unknown function (DUF3659) ; InterPro: IPR022124 This domain family is found in bacteria and eukaryotes, and is approximately 70 amino acids in length.
Probab=23.01 E-value=51 Score=28.04 Aligned_cols=19 Identities=37% Similarity=0.704 Sum_probs=15.5
Q ss_pred EecCCCCeeccCCCeeecc
Q 006926 188 RVDALGREIDEHGNVVNRT 206 (625)
Q Consensus 188 ~lD~~GR~ID~~G~vI~~~ 206 (625)
.+|++|..+|.+|++|-..
T Consensus 38 ~vd~~G~I~d~~G~viGka 56 (64)
T PF12396_consen 38 KVDEDGDILDKDGNVIGKA 56 (64)
T ss_pred cCCCCCCEECCCCCEEEEE
Confidence 4789999999999998643
No 50
>TIGR00985 3a0801s04tom mitochondrial import receptor subunit translocase of outer membrane 20 kDa subunit.
Probab=20.64 E-value=2.3e+02 Score=27.94 Aligned_cols=19 Identities=16% Similarity=0.113 Sum_probs=14.3
Q ss_pred cCCCChHHHHHHHHHHHHH
Q 006926 437 ATQDPTRLEKEIRSAAAER 455 (625)
Q Consensus 437 AV~DPTkvEa~VR~QmeeR 455 (625)
-..|++.+|+---+||+.=
T Consensus 79 ~p~d~~e~E~~Fl~eV~~G 97 (148)
T TIGR00985 79 DPTDPSEKEAFFLQEVQLG 97 (148)
T ss_pred CCCCHHHHHHHHHHHHHHH
Confidence 3567888888888888754
Done!