Query 006926
Match_columns 625
No_of_seqs 150 out of 213
Neff 4.1
Searched_HMMs 29240
Date Mon Mar 25 12:37:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006926.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006926hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1yrx_A Hypothetical protein RS 96.6 0.0038 1.3E-07 56.8 7.2 85 510-625 30-114 (121)
2 2iyg_A APPA, antirepressor of 95.6 0.015 5.1E-07 53.1 5.9 79 509-606 41-119 (124)
3 2hfn_A Synechocystis photorece 95.2 0.027 9.2E-07 52.9 6.1 84 509-611 31-118 (153)
4 1x0p_A Hypothetical protein TL 95.1 0.015 5E-07 54.1 4.0 83 510-611 29-115 (143)
5 2byc_A Blue-light receptor of 94.1 0.052 1.8E-06 50.3 5.1 72 510-600 31-102 (137)
6 3gfz_A Klebsiella pneumoniae B 90.8 0.34 1.2E-05 51.2 6.8 86 511-615 37-126 (413)
7 2lxf_A Uncharacterized protein 79.5 2.4 8.1E-05 38.6 5.3 61 487-547 30-92 (121)
8 1aps_A Acylphosphatase; hydrol 77.8 4.8 0.00016 34.7 6.5 54 494-547 10-65 (98)
9 2vh7_A Acylphosphatase-1; hydr 76.0 3.8 0.00013 35.4 5.3 49 500-548 18-67 (99)
10 1ulr_A Putative acylphosphatas 69.8 2.8 9.7E-05 35.5 3.0 46 503-548 15-61 (88)
11 2fhm_A Probable acylphosphatas 69.7 2.8 9.5E-05 35.7 2.9 47 503-549 15-62 (91)
12 2gv1_A Probable acylphosphatas 68.9 2.7 9.1E-05 35.9 2.7 48 500-547 14-62 (92)
13 1urr_A CG18505 protein; acylph 67.9 2.7 9.4E-05 36.5 2.6 50 499-548 20-70 (102)
14 3trg_A Acylphosphatase; fatty 67.8 2.9 9.8E-05 36.3 2.7 50 499-548 21-71 (98)
15 1w2i_A Acylphosphatase; hydrol 67.0 2.7 9.3E-05 35.8 2.3 47 501-547 15-62 (91)
16 2bjd_A Acylphosphatase; hypert 66.2 3.3 0.00011 36.1 2.7 49 499-547 23-72 (101)
17 3zs9_C Golgi to ER traffic pro 54.3 9.1 0.00031 28.6 2.8 20 387-406 3-22 (38)
18 1f32_A Major pepsin inhibitor 53.5 9.5 0.00032 35.8 3.5 37 387-423 95-144 (149)
19 3itf_A Periplasmic adaptor pro 51.0 74 0.0025 29.5 9.2 80 382-474 40-125 (145)
20 2kxh_B Peptide of FAR upstream 45.6 16 0.00056 26.1 2.9 15 139-153 11-25 (31)
21 1gxu_A Hydrogenase maturation 44.5 8.9 0.0003 32.7 1.8 37 500-537 17-54 (91)
22 3sjd_D Golgi to ER traffic pro 44.0 18 0.00063 27.9 3.2 24 384-407 10-33 (46)
23 3o39_A Periplasmic protein rel 38.6 96 0.0033 27.4 7.5 78 382-475 12-98 (108)
24 2ksw_A Oryctin; kazal-type, pr 30.0 40 0.0014 27.0 3.2 28 517-545 15-42 (66)
25 3oeo_A Spheroplast protein Y; 25.2 61 0.0021 29.5 4.1 81 382-474 28-113 (138)
No 1
>1yrx_A Hypothetical protein RSPH03001874; ferredoxin-like fold, flavin binding, photoreceptor, transcr; HET: FMN D9G; 2.30A {Rhodobacter sphaeroides 2} SCOP: d.58.10.2 PDB: 2bun_A*
Probab=96.64 E-value=0.0038 Score=56.83 Aligned_cols=85 Identities=16% Similarity=0.307 Sum_probs=67.9
Q ss_pred ccccccccceeEEEEcCCceEEEEecchhHHHHHhhhhhhccCccccccccCcCccccCCCCCCeeEEEEeeecCCCCCC
Q 006926 510 DVNAHENRLTGCAVICEGINVVVVEGGSKSIKRYGKLMLRRIDWAKAVKEEDEDEDETTDKPVNKCVLVWQGNVARPSFN 589 (625)
Q Consensus 510 d~NAqQl~LTG~~li~~~~nlVVVEGG~KsiKkYkkLMl~RIkW~e~~~~~d~~~~e~~d~~~N~C~LVWEG~vk~r~F~ 589 (625)
..|-.+.++||+-+++.+.=+=|.||.+.++.. +..||.= |..-..|..+-.|.+.+|.|.
T Consensus 30 r~~N~~~gITG~Ll~~~g~F~Q~LEG~~~~V~~----Ly~rI~~---------------D~RH~~v~~l~~~~i~~R~F~ 90 (121)
T 1yrx_A 30 QAHNARAQLTGALFYSQGVFFQWLEGRPAAVAE----VMTHIQR---------------DRRHSNVEILAEEPIAKRRFA 90 (121)
T ss_dssp HHHHHHHTCEEEEEEETTEEEEEEEECHHHHHH----HHHHHHT---------------CTTEEEEEEEEEEEESSCSCS
T ss_pred HHhhhhcCCEEEEEEeCCEEEEEecCCHHHHHH----HHHHHhc---------------CCCcCCeEEEEeeeccccccC
Confidence 456678999999999999889999999999986 4467762 233456889999999999999
Q ss_pred CeeEEecCCHHHHHHHHHhcCchhHHHHHhcccCCC
Q 006926 590 RFFVHECMTEAAAKKVFADAGVAHYWDLAVNFNDEI 625 (625)
Q Consensus 590 ~w~~k~c~te~~Are~L~k~~~ehYWdlA~~~~~~~ 625 (625)
+|.|..+..+. ..|.++..++.+|
T Consensus 91 ~WsM~~~~~~~------------~~~~l~~~~~~~~ 114 (121)
T 1yrx_A 91 GWHMQLSCSEA------------DMRSLGLAESRQI 114 (121)
T ss_dssp SEEEEECCCHH------------HHHHTTCCCCCCC
T ss_pred CCcccccchHH------------HHHhhcccchhhh
Confidence 99999998774 5566666666655
No 2
>2iyg_A APPA, antirepressor of PPSR, sensor of blue light; signal transduction; HET: FMN; 2.3A {Rhodobacter sphaeroides} PDB: 2iyi_A*
Probab=95.65 E-value=0.015 Score=53.14 Aligned_cols=79 Identities=15% Similarity=0.288 Sum_probs=65.0
Q ss_pred cccccccccceeEEEEcCCceEEEEecchhHHHHHhhhhhhccCccccccccCcCccccCCCCCCeeEEEEeeecCCCCC
Q 006926 509 VDVNAHENRLTGCAVICEGINVVVVEGGSKSIKRYGKLMLRRIDWAKAVKEEDEDEDETTDKPVNKCVLVWQGNVARPSF 588 (625)
Q Consensus 509 Vd~NAqQl~LTG~~li~~~~nlVVVEGG~KsiKkYkkLMl~RIkW~e~~~~~d~~~~e~~d~~~N~C~LVWEG~vk~r~F 588 (625)
-..|-.+.++||+-+++.+.=+=|+||.+.++.. +..||.= |..-..|..+-.|.+.+|.|
T Consensus 41 ar~~N~~~gITG~Ll~~~g~F~Q~LEG~~~~V~~----Ly~rI~~---------------D~RH~~v~~L~~~~i~~R~F 101 (124)
T 2iyg_A 41 SQAHNARAQLTGALFYSQGVFFQWLEGRPAAVAE----VMTHIQR---------------DRRHSNVEILAEEPIAKRRF 101 (124)
T ss_dssp HHHHHHHHTCEEEEEEETTEEEEEEEECHHHHHH----HHHHHHH---------------CTTEEEEEEEEEEECSSCSS
T ss_pred HHHhhhhcCCEEEEEEcCCEEEEEeeCCHHHHHH----HHHHHhc---------------CCCcCCeEEEEeeecccCcc
Confidence 3456678999999999999889999999999986 3467762 22345688999999999999
Q ss_pred CCeeEEecCCHHHHHHHH
Q 006926 589 NRFFVHECMTEAAAKKVF 606 (625)
Q Consensus 589 ~~w~~k~c~te~~Are~L 606 (625)
.+|.|..+..+.+.+.+.
T Consensus 102 ~~WsM~~~~~~~~~~~l~ 119 (124)
T 2iyg_A 102 AGWHMQLSCSEADMRSLG 119 (124)
T ss_dssp TTCSSEEECCHHHHHHHH
T ss_pred CCCcccccchhHHHHHHh
Confidence 999999999888777654
No 3
>2hfn_A Synechocystis photoreceptor (SLR1694); beta sheet ferredoxin-like fold, flavin binding protein, electron transport; HET: FMN; 1.80A {Synechocystis SP} PDB: 2hfo_A* 3mzi_A*
Probab=95.16 E-value=0.027 Score=52.91 Aligned_cols=84 Identities=15% Similarity=0.164 Sum_probs=67.3
Q ss_pred cccccccccceeEEEEcCCceEEEEecchhHHHHHhhhhhhccCccccccccCcCccccCCCCCCeeEEEEeeecCCCCC
Q 006926 509 VDVNAHENRLTGCAVICEGINVVVVEGGSKSIKRYGKLMLRRIDWAKAVKEEDEDEDETTDKPVNKCVLVWQGNVARPSF 588 (625)
Q Consensus 509 Vd~NAqQl~LTG~~li~~~~nlVVVEGG~KsiKkYkkLMl~RIkW~e~~~~~d~~~~e~~d~~~N~C~LVWEG~vk~r~F 588 (625)
-..|-.+.++||+-+++.+.=+=|+||.+.++.. +..||.= |..-..|..+-.|.+.+|.|
T Consensus 31 a~~~N~~~gITG~Ll~~~g~F~Q~LEG~~~~V~~----l~~rI~~---------------D~RH~~v~~l~~~~i~~R~F 91 (153)
T 2hfn_A 31 SQRNNPANGITGLLCYSKPAFLQVLEGECEQVNE----TYHRIVQ---------------DERHHSPQIIECMPIRRRNF 91 (153)
T ss_dssp HHHHHHHHTCEEEEEEETTEEEEEEEEEHHHHHH----HHHHHHT---------------CTTEEEEEEEEEEECSSCSS
T ss_pred HHHhhhhcCcEEEEEEeCCEEEEEeeCCHHHHHH----HHHHHhc---------------CCCcCCeEEEEecccCCCcc
Confidence 3456678999999999999989999999999986 3467762 23345799999999999999
Q ss_pred CCeeEEecCCH----HHHHHHHHhcCc
Q 006926 589 NRFFVHECMTE----AAAKKVFADAGV 611 (625)
Q Consensus 589 ~~w~~k~c~te----~~Are~L~k~~~ 611 (625)
.+|.|....-+ ......|.+++.
T Consensus 92 ~~W~M~~~~~~~~~~~~~~~~~~~~~~ 118 (153)
T 2hfn_A 92 EVWSMQAITVNDLSTEQVKTLVLKYSG 118 (153)
T ss_dssp TTCSCEEEECSTTSCHHHHHHHHHTSS
T ss_pred CCCcCeeecccccchhHHHHHHHhccc
Confidence 99999988766 666777766543
No 4
>1x0p_A Hypothetical protein TLL0078; BLUF, FAD, structural genomics, electron transport; HET: FAD; 2.00A {Thermosynechococcus elongatus} SCOP: d.58.10.2
Probab=95.11 E-value=0.015 Score=54.09 Aligned_cols=83 Identities=14% Similarity=0.182 Sum_probs=66.1
Q ss_pred ccccccccceeEEEEcCCceEEEEecchhHHHHHhhhhhhccCccccccccCcCccccCCCCCCeeEEEEeeecCCCCCC
Q 006926 510 DVNAHENRLTGCAVICEGINVVVVEGGSKSIKRYGKLMLRRIDWAKAVKEEDEDEDETTDKPVNKCVLVWQGNVARPSFN 589 (625)
Q Consensus 510 d~NAqQl~LTG~~li~~~~nlVVVEGG~KsiKkYkkLMl~RIkW~e~~~~~d~~~~e~~d~~~N~C~LVWEG~vk~r~F~ 589 (625)
..|-.+.++||+-+++.+.=+=|+||.+.++.. +..||.= |..-..|..+-.|.+.+|.|.
T Consensus 29 ~~~N~~~~ITG~Ll~~~g~F~Q~LEG~~~~V~~----l~~rI~~---------------D~RH~~v~~l~~~~i~~R~F~ 89 (143)
T 1x0p_A 29 EVNNLRDGITGMLCYGNGMFLQTLEGDRQKVSE----TYARILK---------------DPRHHSAEIVEFKAIEERTFI 89 (143)
T ss_dssp HHHHHHHTCEEEEEEETTEEEEEEEEEHHHHHH----HHHHHHT---------------CTTEEEEEEEEEEECSSCSSC
T ss_pred HHhhhhcCCEEEEEEcCCEEEEEecCCHHHHHH----HHHHHhc---------------CCCcCCeEEEEeeeccccccC
Confidence 456678999999999999889999999999986 3467762 233456889999999999999
Q ss_pred CeeEEecCCHH----HHHHHHHhcCc
Q 006926 590 RFFVHECMTEA----AAKKVFADAGV 611 (625)
Q Consensus 590 ~w~~k~c~te~----~Are~L~k~~~ 611 (625)
+|.|....-+. ....+|.+++.
T Consensus 90 ~W~M~~~~~~~~~~~~~~~~~~~~~~ 115 (143)
T 1x0p_A 90 NWSMRLVQLGEMDSDTIRRLRLKYSP 115 (143)
T ss_dssp SCSCCEEEGGGSCHHHHHHHHHHTCS
T ss_pred CCcceeecccccchHHHHHHHHhccc
Confidence 99998776655 66777766544
No 5
>2byc_A Blue-light receptor of the BLUF-family; signaling protein, photoreceptor, flavin; HET: FMN; 1.9A {Rhodobacter sphaeroides} SCOP: d.58.10.2
Probab=94.09 E-value=0.052 Score=50.28 Aligned_cols=72 Identities=14% Similarity=0.102 Sum_probs=59.5
Q ss_pred ccccccccceeEEEEcCCceEEEEecchhHHHHHhhhhhhccCccccccccCcCccccCCCCCCeeEEEEeeecCCCCCC
Q 006926 510 DVNAHENRLTGCAVICEGINVVVVEGGSKSIKRYGKLMLRRIDWAKAVKEEDEDEDETTDKPVNKCVLVWQGNVARPSFN 589 (625)
Q Consensus 510 d~NAqQl~LTG~~li~~~~nlVVVEGG~KsiKkYkkLMl~RIkW~e~~~~~d~~~~e~~d~~~N~C~LVWEG~vk~r~F~ 589 (625)
..|-.+.++||+-+++.+.=+=|+||.+.++.. +..||.= |..-..|..+-.|.+.+|.|.
T Consensus 31 r~~N~~~gITG~Ll~~~g~F~QvLEG~~~~V~~----L~~rI~~---------------D~RH~~v~~L~~~~i~~R~F~ 91 (137)
T 2byc_A 31 RVRNLRLGITGILLYNGVHFVQTIEGPRSACDE----LFRLISA---------------DPRHQEILAFDLEPITARRFP 91 (137)
T ss_dssp HHHHHHHTCEEEEEECSSEEEEEEEEEHHHHHH----HHHHHHT---------------CTTEEEEEEEEEEECSSCSST
T ss_pred HHhhhhcCCEEEEEEeCCEEEEEeeCCHHHHHH----HHHHHhc---------------CCCcCCeEEEEecccCCCcCC
Confidence 456678999999999999989999999999986 3467762 233457999999999999999
Q ss_pred CeeEEecCCHH
Q 006926 590 RFFVHECMTEA 600 (625)
Q Consensus 590 ~w~~k~c~te~ 600 (625)
+|.|....-+.
T Consensus 92 ~W~M~~~~~~~ 102 (137)
T 2byc_A 92 DWSMRIVSRKE 102 (137)
T ss_dssp TCSCEEECHHH
T ss_pred CCcCccccccc
Confidence 99999877653
No 6
>3gfz_A Klebsiella pneumoniae BLRP1; TIM-barrel, EAL domain, BLUF domain, hydrolase, signaling PR; HET: C2E FMN; 2.05A {Klebsiella pneumoniae subsp} PDB: 3gfy_A* 3gfx_A* 3gg0_A* 3gg1_A* 2kb2_A*
Probab=90.83 E-value=0.34 Score=51.22 Aligned_cols=86 Identities=13% Similarity=0.022 Sum_probs=62.3
Q ss_pred cccccccceeEEEEcCCceEEEEecchhHHHHHhhhhhhccCccccccccCcCccccCCCCCCeeEEEEeeecCCCCCCC
Q 006926 511 VNAHENRLTGCAVICEGINVVVVEGGSKSIKRYGKLMLRRIDWAKAVKEEDEDEDETTDKPVNKCVLVWQGNVARPSFNR 590 (625)
Q Consensus 511 ~NAqQl~LTG~~li~~~~nlVVVEGG~KsiKkYkkLMl~RIkW~e~~~~~d~~~~e~~d~~~N~C~LVWEG~vk~r~F~~ 590 (625)
.|-.+.++||+-+++.+.=+=|.||.+.++.. +..||.= |..-..|..+-.|.+..|.|.+
T Consensus 37 ~~N~~~~itG~L~~~~~~F~Q~lEG~~~~v~~----l~~~I~~---------------D~RH~~v~~l~~~~~~~r~F~~ 97 (413)
T 3gfz_A 37 SKNLPLGITGILLFNGLQFFQVLEGTEEALES----LFSEIQS---------------DPRHRDVVELMRDYSAYRRFHG 97 (413)
T ss_dssp HHHGGGTCEEEEEECSSEEEEEEEEEHHHHHH----HHHHHHT---------------CTTCEEEEEEEEEECSSCSSTT
T ss_pred HhccccCcEEEEEEeCCEEEEEEeCCHHHHHH----HHHHHhc---------------CCCcCCeEEEEEeecCcccCCC
Confidence 56678999999999999889999999999986 3467762 2334578999999999999999
Q ss_pred eeEEecC----CHHHHHHHHHhcCchhHH
Q 006926 591 FFVHECM----TEAAAKKVFADAGVAHYW 615 (625)
Q Consensus 591 w~~k~c~----te~~Are~L~k~~~ehYW 615 (625)
|.|.... +..+....+.+++-.+|+
T Consensus 98 w~M~~~~l~~~~~~~~~~~i~~~~~~~~~ 126 (413)
T 3gfz_A 98 TGMRILDLRLFETDGALEEILRFSTFGVT 126 (413)
T ss_dssp CSCCEEEGGGSCTTHHHHHHHHHCC----
T ss_pred cchhhccccccChHHHHHHHHhhCCcccc
Confidence 9999762 233333333355555554
No 7
>2lxf_A Uncharacterized protein; beaver fever, giardiasis, seattle structural genomics center infectious disease, ssgcid, structural genomics; NMR {Giardia lamblia}
Probab=79.49 E-value=2.4 Score=38.55 Aligned_cols=61 Identities=18% Similarity=0.186 Sum_probs=50.1
Q ss_pred CCceEEEEEEEccC-CCCccccccccccccccceeEEE-EcCCceEEEEecchhHHHHHhhhh
Q 006926 487 SVETIVSVYKINDL-SHPKTRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLM 547 (625)
Q Consensus 487 s~~v~vaVyrI~~L-snP~hrFKVd~NAqQl~LTG~~l-i~~~~nlVVVEGG~KsiKkYkkLM 547 (625)
+..+....|+|.=. .-=--|+-+..-|++|+|+|.|. +.++-=.|++||.+.++..|..++
T Consensus 30 ~~di~t~~frV~G~VQGVGFR~~v~~~A~~lgL~G~VrN~~dG~Vei~~eG~~~~v~~f~~~l 92 (121)
T 2lxf_A 30 SEDVTTLCYRVTGKVQGVFFRKYTKKEADALSLVGYVTNNEDGSVSGVVQGPKEQVDAFVKYL 92 (121)
T ss_dssp STTEEEEEEEEEECTTCCCCHHHHHHHHHHHTCEEEEEECTTSCEEEEEEEEHHHHHHHHHHH
T ss_pred ccCEEEEEEEEEEeeCCcCchHHHHHHHHHcCCEEEEEECCCCCEEEEEEECHHHHHHHHHHH
Confidence 35677888999865 44578999999999999999886 556656789999999999997766
No 8
>1aps_A Acylphosphatase; hydrolase(acting on acid anhydrides); NMR {Equus caballus} SCOP: d.58.10.1
Probab=77.81 E-value=4.8 Score=34.71 Aligned_cols=54 Identities=13% Similarity=0.167 Sum_probs=41.1
Q ss_pred EEEEc-cCCCCccccccccccccccceeEEE-EcCCceEEEEecchhHHHHHhhhh
Q 006926 494 VYKIN-DLSHPKTRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLM 547 (625)
Q Consensus 494 VyrI~-~LsnP~hrFKVd~NAqQl~LTG~~l-i~~~~nlVVVEGG~KsiKkYkkLM 547 (625)
-+.|. ...-=--|+-+..-|++|+|+|.|. ..++-=.|++||.+.++..|...+
T Consensus 10 ~i~V~G~VQGVGFR~~v~~~A~~lgL~G~V~N~~dG~Vei~~eG~~~~l~~f~~~l 65 (98)
T 1aps_A 10 DYEVFGRVQGVCFRMYAEDEARKIGVVGWVKNTSKGTVTGQVQGPEEKVNSMKSWL 65 (98)
T ss_dssp EEEEECTTSCCCCTTHHHHHHHHHTCEEEEECCTTCEEEEEEEEEHHHHHHHHHSS
T ss_pred EEEEEEEECCcCHHHHHHHHHHHcCCeEEEEECCCCcEEEEEEeCHHHHHHHHHHH
Confidence 34444 3455667888999999999999875 455645789999999999986555
No 9
>2vh7_A Acylphosphatase-1; hydrolase, acetylation; 1.45A {Homo sapiens} PDB: 2w4c_A 2w4p_A 2k7k_A 2k7j_A 2acy_A
Probab=75.98 E-value=3.8 Score=35.45 Aligned_cols=49 Identities=10% Similarity=0.073 Sum_probs=39.5
Q ss_pred CCCCccccccccccccccceeEEE-EcCCceEEEEecchhHHHHHhhhhh
Q 006926 500 LSHPKTRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLML 548 (625)
Q Consensus 500 LsnP~hrFKVd~NAqQl~LTG~~l-i~~~~nlVVVEGG~KsiKkYkkLMl 548 (625)
..-=--|+-+..-|++|+|+|.|. ..++-=.|++||.+.++..|...+.
T Consensus 18 VQGVGFR~~v~~~A~~lgL~G~V~N~~dG~Vei~~eG~~~~v~~f~~~l~ 67 (99)
T 2vh7_A 18 VQGVFFRKHTQAEGKKLGLVGWVQNTDRGTVQGQLQGPISKVRHMQEWLE 67 (99)
T ss_dssp CSSSCHHHHHHHHHHHTTCEEEEEECTTSCEEEEEEEEHHHHHHHHHHHH
T ss_pred eCCcChHHHHHHHHHHcCCcEEEEECCCCCEEEEEEcCHHHHHHHHHHHH
Confidence 445567888899999999999875 5556457899999999999877764
No 10
>1ulr_A Putative acylphosphatase; hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: d.58.10.1
Probab=69.79 E-value=2.8 Score=35.48 Aligned_cols=46 Identities=24% Similarity=0.211 Sum_probs=36.5
Q ss_pred CccccccccccccccceeEEE-EcCCceEEEEecchhHHHHHhhhhh
Q 006926 503 PKTRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLML 548 (625)
Q Consensus 503 P~hrFKVd~NAqQl~LTG~~l-i~~~~nlVVVEGG~KsiKkYkkLMl 548 (625)
=--|+-+..-|++|+|+|.|. ..++-=.|++||.+.++..|...+.
T Consensus 15 VGFR~~v~~~A~~lgl~G~V~N~~dG~Vei~~eG~~~~i~~f~~~l~ 61 (88)
T 1ulr_A 15 VGYRAFAQKKALELGLSGYAENLPDGRVEVVAEGPKEALELFLHHLK 61 (88)
T ss_dssp SSHHHHHHHHHHHTTCEEEEEECTTSCEEEEEESCHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHcCCeEEEEECCCCcEEEEEEeCHHHHHHHHHHHH
Confidence 345777888899999999885 4456457889999999999877664
No 11
>2fhm_A Probable acylphosphatase; hydrolase; NMR {Bacillus subtilis} PDB: 2hlt_A 2hlu_A 3br8_A
Probab=69.65 E-value=2.8 Score=35.67 Aligned_cols=47 Identities=17% Similarity=0.302 Sum_probs=37.3
Q ss_pred CccccccccccccccceeEEE-EcCCceEEEEecchhHHHHHhhhhhh
Q 006926 503 PKTRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLMLR 549 (625)
Q Consensus 503 P~hrFKVd~NAqQl~LTG~~l-i~~~~nlVVVEGG~KsiKkYkkLMl~ 549 (625)
=--|+-+..-|++|+|+|.|. ..++-=.|++||.+.++..|...+.+
T Consensus 15 VGFR~~v~~~A~~lgl~G~V~N~~dG~Vei~~eG~~~~i~~f~~~l~~ 62 (91)
T 2fhm_A 15 VGFRYFVQMEADKRKLAGWVKNRDDGRVEILAEGPENALQSFVEAVKN 62 (91)
T ss_dssp SCHHHHHHHHHHHTTCEEEEEECTTSCEEEEEEECHHHHHHHHHHHHT
T ss_pred cCHHHHHHHHHHHcCCeEEEEECCCCcEEEEEEeCHHHHHHHHHHHHh
Confidence 345777888899999999886 45564578999999999998777743
No 12
>2gv1_A Probable acylphosphatase; globular alpha-helix/beta-sheet protein, hydrolase; NMR {Escherichia coli}
Probab=68.91 E-value=2.7 Score=35.93 Aligned_cols=48 Identities=21% Similarity=0.265 Sum_probs=38.3
Q ss_pred CCCCccccccccccccccceeEEE-EcCCceEEEEecchhHHHHHhhhh
Q 006926 500 LSHPKTRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLM 547 (625)
Q Consensus 500 LsnP~hrFKVd~NAqQl~LTG~~l-i~~~~nlVVVEGG~KsiKkYkkLM 547 (625)
..-=--|+-+..-|++|+|+|.|. ..++-=.|++||.+.++..|...+
T Consensus 14 VQGVGFR~~v~~~A~~lgL~G~V~N~~dG~Vei~~eG~~~~i~~f~~~l 62 (92)
T 2gv1_A 14 VQGVGFRYTTQYEAKRLGLTGYAKNLDDGSVEVVACGEEGQVEKLMQWL 62 (92)
T ss_dssp CTTTTCCSHHHHHHHHHTCCCEEEECSSSCEEEEECSCHHHHHHHHHHH
T ss_pred eCCcCHHHHHHHHHHHcCCeEEEEECCCCcEEEEEEeCHHHHHHHHHHh
Confidence 344456888889999999999885 455645788999999999987776
No 13
>1urr_A CG18505 protein; acylphosphatase, enzyme; 1.5A {Drosophila melanogaster} SCOP: d.58.10.1
Probab=67.88 E-value=2.7 Score=36.55 Aligned_cols=50 Identities=10% Similarity=0.023 Sum_probs=40.4
Q ss_pred cCCCCccccccccccccccceeEEE-EcCCceEEEEecchhHHHHHhhhhh
Q 006926 499 DLSHPKTRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLML 548 (625)
Q Consensus 499 ~LsnP~hrFKVd~NAqQl~LTG~~l-i~~~~nlVVVEGG~KsiKkYkkLMl 548 (625)
...-=--|+-+..-|++|+|+|.|. ..++-=.|++||.+.++..|...+.
T Consensus 20 ~VQGVGFR~~v~~~A~~lgL~G~V~N~~dG~Vei~~eG~~~~l~~f~~~l~ 70 (102)
T 1urr_A 20 RVQGVFFRKHTSHEAKRLGVRGWCMNTRDGTVKGQLEAPMMNLMEMKHWLE 70 (102)
T ss_dssp ECSSSSHHHHHHHHHHHHTCEEEEEECTTSCEEEEEEECHHHHHHHHHHHH
T ss_pred eECCcChhHHHHHHHHHhCCcEEEEECCCCCEEEEEEcCHHHHHHHHHHHH
Confidence 3455567888999999999999875 5556457899999999999987775
No 14
>3trg_A Acylphosphatase; fatty acid and phospholipid metabolism, hydrolase; 1.60A {Coxiella burnetii}
Probab=67.81 E-value=2.9 Score=36.34 Aligned_cols=50 Identities=24% Similarity=0.179 Sum_probs=39.8
Q ss_pred cCCCCccccccccccccccceeEEE-EcCCceEEEEecchhHHHHHhhhhh
Q 006926 499 DLSHPKTRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLML 548 (625)
Q Consensus 499 ~LsnP~hrFKVd~NAqQl~LTG~~l-i~~~~nlVVVEGG~KsiKkYkkLMl 548 (625)
...-=--|+-+..-|++|+|+|.|. ..++-=.|++||.+.++..|...+.
T Consensus 21 ~VQGVGFR~~v~~~A~~lgL~G~VrN~~dG~Vei~~eG~~~~l~~f~~~l~ 71 (98)
T 3trg_A 21 KVQGVFFRESVRKKAEELQLTGWVKNLSHGDVELVACGERDSIMILTEWLW 71 (98)
T ss_dssp ECSSSCHHHHHHHHHHHTTCEEEEEECTTSCEEEEEEEEHHHHHHHHHHTT
T ss_pred eECCCCccHHHHHHHHHcCCeEEEEECCCCEEEEEEEECHHHHHHHHHHHH
Confidence 3455567888999999999999986 4456567889999999999876664
No 15
>1w2i_A Acylphosphatase; hydrolase, thermophilic, stability, amyloid; 1.5A {Pyrococcus horikoshii} SCOP: d.58.10.1 PDB: 1v3z_A 2w4d_A
Probab=66.99 E-value=2.7 Score=35.85 Aligned_cols=47 Identities=15% Similarity=0.188 Sum_probs=37.0
Q ss_pred CCCccccccccccccccceeEEE-EcCCceEEEEecchhHHHHHhhhh
Q 006926 501 SHPKTRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLM 547 (625)
Q Consensus 501 snP~hrFKVd~NAqQl~LTG~~l-i~~~~nlVVVEGG~KsiKkYkkLM 547 (625)
.-=--|+-+..-|++|+|+|.|. ..++-=.|++||.+.++..|...+
T Consensus 15 QGVGFR~~v~~~A~~lgL~G~V~N~~dG~Vei~~~G~~~~v~~f~~~l 62 (91)
T 1w2i_A 15 QGVGFRWSMQREARKLGVNGWVRNLPDGSVEAVLEGDEERVEALIGWA 62 (91)
T ss_dssp SSSSHHHHHHHHHHHHTCEEEEEECTTSCEEEEEEEEHHHHHHHHHHT
T ss_pred CCcCHHHHHHHHHHHcCCeEEEEECCCCCEEEEEEeCHHHHHHHHHHH
Confidence 33446778888999999999886 455645788999999999986665
No 16
>2bjd_A Acylphosphatase; hyperthermophIle, hydrolase; 1.27A {Sulfolobus solfataricus} PDB: 2bje_A 1y9o_A
Probab=66.19 E-value=3.3 Score=36.15 Aligned_cols=49 Identities=20% Similarity=0.178 Sum_probs=40.3
Q ss_pred cCCCCccccccccccccccceeEEE-EcCCceEEEEecchhHHHHHhhhh
Q 006926 499 DLSHPKTRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLM 547 (625)
Q Consensus 499 ~LsnP~hrFKVd~NAqQl~LTG~~l-i~~~~nlVVVEGG~KsiKkYkkLM 547 (625)
...----|+-+..-|++|+|+|.|. ..++-=.|+++|.+.++..|...+
T Consensus 23 ~VQGVGFR~~v~~~A~~lgL~G~V~N~~dG~Vei~~eG~~~~i~~f~~~l 72 (101)
T 2bjd_A 23 LVQGVGFRKFVQIHAIRLGIKGYAKNLPDGSVEVVAEGYEEALSKLLERI 72 (101)
T ss_dssp ECSSSSHHHHHHHHHHHTTCEEEEEECTTSCEEEEEEEEHHHHHHHHHHH
T ss_pred eECCcCHHHHHHHHHHHcCCeEEEEECCCCcEEEEEEeCHHHHHHHHHHH
Confidence 4566778899999999999999886 455645789999999999987766
No 17
>3zs9_C Golgi to ER traffic protein 2; hydrolase-transport protein complex, membrane protein, targe factor; HET: ADP; 2.10A {Saccharomyces cerevisiae}
Probab=54.26 E-value=9.1 Score=28.58 Aligned_cols=20 Identities=30% Similarity=0.478 Sum_probs=16.5
Q ss_pred CCCHHHHHHHHHHHHHHHHH
Q 006926 387 KLTKKEQKKLRTQRRLAREK 406 (625)
Q Consensus 387 yLTKKEqKKLRRqrR~e~~K 406 (625)
-||..|+.+|||.||+++-+
T Consensus 3 els~~ekaRlrRERR~aKi~ 22 (38)
T 3zs9_C 3 ELTEAEKRRLLRERRQKKFS 22 (38)
T ss_dssp -CCHHHHHHHHHHHHHHHHT
T ss_pred ccCHHHHHHHHHHHHHHHHH
Confidence 38899999999999987643
No 18
>1f32_A Major pepsin inhibitor PI-3; proteinase inhibitor, hydrolase inhibitor; 1.75A {Ascaris suum} SCOP: d.62.1.1 PDB: 1f34_B*
Probab=53.55 E-value=9.5 Score=35.78 Aligned_cols=37 Identities=32% Similarity=0.566 Sum_probs=21.3
Q ss_pred CCCHHHHHHHHH-HHHHHHHHHHHHHHHc------------CCCCCCCcc
Q 006926 387 KLTKKEQKKLRT-QRRLAREKDRQEMIRQ------------GLIEPPKPK 423 (625)
Q Consensus 387 yLTKKEqKKLRR-qrR~e~~KEkQdKIRL------------GL~PPPpPK 423 (625)
-||..|+..|-. +......+|+|+.+++ ||.||++|-
T Consensus 95 dLT~~Eq~EL~~y~~k~~a~eer~e~~~~~~~~~k~~k~~~~~~pP~kPS 144 (149)
T 1f32_A 95 DLTAKDHAEVQTFREKIAAFEEQQENQPPSSGMPHGAVPAGGLSPPPPPS 144 (149)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHC--------------------CCCCCCG
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHhccchhhcCCCCCcccccCCCCCCCC
Confidence 389999999986 5556666777766655 577777663
No 19
>3itf_A Periplasmic adaptor protein CPXP; CPXR, CPXA, cpxrap, CPX-pathway, envelope stress, transduction; HET: MSE; 1.45A {Escherichia coli str} PDB: 3qzc_A
Probab=51.05 E-value=74 Score=29.52 Aligned_cols=80 Identities=18% Similarity=0.302 Sum_probs=41.6
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCccchh-hhhhhhhccccCCCChHHHHHHHHHHHHHHHHHH
Q 006926 382 PPQPLKLTKKEQKKLRTQRRLAREKDRQEMIRQGLIEPPKPKVKM-SNLMKVLGSEATQDPTRLEKEIRSAAAEREQAHI 460 (625)
Q Consensus 382 ~~~plyLTKKEqKKLRRqrR~e~~KEkQdKIRLGL~PPPpPKVKL-SNLMrVLg~eAV~DPTkvEa~VR~QmeeR~~~He 460 (625)
....|-||..-+.+||..+...+...+ + +.... .-|..++.. .--|+.+|.+.+.+..+.+.....
T Consensus 40 m~~~L~LTdeQkqqir~L~~~~r~~~~----------~--~~~~~r~~l~~Li~a-d~fDeaa~ral~~~~~~~~~e~~v 106 (145)
T 3itf_A 40 MFDGISLTEHQRQQMRDLMQQARHEQP----------P--VNVSELETMHRLVTA-ENFDENAVRAQAEKMANEQIARQV 106 (145)
T ss_dssp TTTTCCCCHHHHHHHHHHHHHHHHHSC----------C--CCHHHHHHHHHHHTC-SSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCCHHHHHHHHHHHHHHHHHhh----------h--ccHHHHHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHHH
Confidence 456789999999999887654443211 1 11111 223344443 334655555554444443333222
Q ss_pred HH----HHhcc-CCHHHHH
Q 006926 461 DR----NIARK-LTPAERR 474 (625)
Q Consensus 461 ~~----NeeRK-LT~EqRr 474 (625)
.+ |.-.. ||||||.
T Consensus 107 ~r~k~~~qiy~vLTPEQk~ 125 (145)
T 3itf_A 107 EMAKVRNQMYRLLTPEQQA 125 (145)
T ss_dssp HHHHHHHHHHTTSCHHHHH
T ss_pred HHHHHHHHHHhhCCHHHHH
Confidence 22 22233 9999974
No 20
>2kxh_B Peptide of FAR upstream element-binding protein 1; RRM, FIR, FBP, protein-protein complex, protein binding; NMR {Homo sapiens}
Probab=45.60 E-value=16 Score=26.07 Aligned_cols=15 Identities=47% Similarity=0.811 Sum_probs=13.9
Q ss_pred HHHHHHHHHHHHHhc
Q 006926 139 IEAVKRAQELAAKMG 153 (625)
Q Consensus 139 ~~~~~r~~~~~~~~~ 153 (625)
-+++.||+.+|++|+
T Consensus 11 adA~~RaRQIaAKig 25 (31)
T 2kxh_B 11 KDALQRARQIAAKIG 25 (31)
T ss_dssp HHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhc
Confidence 589999999999988
No 21
>1gxu_A Hydrogenase maturation protein HYPF; phosphatase, acylphosphatases, hydrogenase maturations, fibril formation, zinc-finger, complete proteome; 1.27A {Escherichia coli} SCOP: d.58.10.1 PDB: 1gxt_A
Probab=44.50 E-value=8.9 Score=32.74 Aligned_cols=37 Identities=19% Similarity=-0.004 Sum_probs=29.6
Q ss_pred CCCCccccccccccccccceeEEE-EcCCceEEEEecch
Q 006926 500 LSHPKTRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGS 537 (625)
Q Consensus 500 LsnP~hrFKVd~NAqQl~LTG~~l-i~~~~nlVVVEGG~ 537 (625)
..-=--|+-+...|++|+|+|.|. ..++ =.|++||.+
T Consensus 17 VQGVGFR~~v~~~A~~lgL~G~VrN~~dG-Vei~~eG~~ 54 (91)
T 1gxu_A 17 VQGVGFRPFVWQLAQQLNLHGDVCNDGDG-VEVRLREDP 54 (91)
T ss_dssp CSSSSHHHHHHHHHHHHTCCEEEEECSSS-EEEEESSCC
T ss_pred eCCcCHHHHHHHHHHHcCCeEEEEECCCc-EEEEEEECH
Confidence 455567888899999999999875 5566 577889988
No 22
>3sjd_D Golgi to ER traffic protein 2; ATPase, receptor complex, TA-protein biogenesis, GET pathway hydrolase-transport protein complex; HET: ADP; 4.60A {Saccharomyces cerevisiae}
Probab=44.04 E-value=18 Score=27.88 Aligned_cols=24 Identities=25% Similarity=0.364 Sum_probs=16.7
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHH
Q 006926 384 QPLKLTKKEQKKLRTQRRLAREKD 407 (625)
Q Consensus 384 ~plyLTKKEqKKLRRqrR~e~~KE 407 (625)
..--|+..|+.+|||.||+++-+.
T Consensus 10 ~~~~lsa~EkaRLrRERR~aKi~~ 33 (46)
T 3sjd_D 10 MGSELTEAEKRRLLRERRQKKFSN 33 (46)
T ss_dssp -----CHHHHHHHHHHHHHHHHHH
T ss_pred ccccccHHHHHHHHHHHHHHHHHc
Confidence 445688999999999999987554
No 23
>3o39_A Periplasmic protein related to spheroblast format; alpha-helical, structural genomics, montreal-kingston bacter structural genomics initiative; HET: MSE; 2.60A {Escherichia coli}
Probab=38.58 E-value=96 Score=27.43 Aligned_cols=78 Identities=19% Similarity=0.349 Sum_probs=45.4
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhhhhhhhccccCCCChHHHHHHHHHHHHHHHHHHH
Q 006926 382 PPQPLKLTKKEQKKLRTQRRLAREKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTRLEKEIRSAAAEREQAHID 461 (625)
Q Consensus 382 ~~~plyLTKKEqKKLRRqrR~e~~KEkQdKIRLGL~PPPpPKVKLSNLMrVLg~eAV~DPTkvEa~VR~QmeeR~~~He~ 461 (625)
....|-||-.-+-+||..+...+..- +.| ..--...|..++.++.. | |+.||.+++++.+.+.+
T Consensus 12 ~~~~L~LTd~Qk~qir~L~~~~r~~~----------~~~-~~~~r~~m~~Li~ad~F-D----Eaaar~l~~~~~~~~~e 75 (108)
T 3o39_A 12 SFKDLNLTDAQKQQIREIMKGQRDQM----------KRP-PLEERRAMHDIIASDTF-D----KAKAEAQIAKMEEQRKA 75 (108)
T ss_dssp -CCCSCCCHHHHHHHHHHHHTTTTSC----------CCC-CHHHHHHHHHHHSSSSC-C----HHHHHHHHHHTHHHHHH
T ss_pred CcCCCCCCHHHHHHHHHHHHHHHHhc----------ccc-cHHHHHHHHHHhccCCC-C----HHHHHHHHHHHHHHHHH
Confidence 35789999888888877665554321 111 11112234444544443 4 66777777776666665
Q ss_pred HHHhc---------cCCHHHHHH
Q 006926 462 RNIAR---------KLTPAERRE 475 (625)
Q Consensus 462 ~NeeR---------KLT~EqRre 475 (625)
+=.+| =||||||..
T Consensus 76 ~~v~~~r~~~qmy~lLTPEQk~q 98 (108)
T 3o39_A 76 NMLAHMETQNKIYNILTPEQKKQ 98 (108)
T ss_dssp HHHHHHHHHHHHHTTSCHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHH
Confidence 55444 499999743
No 24
>2ksw_A Oryctin; kazal-type, protease inhibitor, hydrolase inhibitor; NMR {Oryctes rhinoceros}
Probab=30.05 E-value=40 Score=26.96 Aligned_cols=28 Identities=25% Similarity=0.442 Sum_probs=22.5
Q ss_pred cceeEEEEcCCceEEEEecchhHHHHHhh
Q 006926 517 RLTGCAVICEGINVVVVEGGSKSIKRYGK 545 (625)
Q Consensus 517 ~LTG~~li~~~~nlVVVEGG~KsiKkYkk 545 (625)
.|.--|.++|.-+||||-||- +..+||-
T Consensus 15 dlvphcflnpekgivvvhggc-alskykc 42 (66)
T 2ksw_A 15 DLVPHCFLNPEKGIVVVHGGC-ALSKYKC 42 (66)
T ss_dssp CSCCEEEECTTSCEEEECSHH-HHHHHHH
T ss_pred cccchhhcccccCEEEEecce-eeeeccc
Confidence 456678999999999999985 6777763
No 25
>3oeo_A Spheroplast protein Y; LTXXQ, extracytoplasmic stress response-related, signaling P; 2.70A {Escherichia coli}
Probab=25.20 E-value=61 Score=29.52 Aligned_cols=81 Identities=20% Similarity=0.352 Sum_probs=42.8
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhhhhhhhccccCCCChHHHHHHHHHHHHHHHHHH-
Q 006926 382 PPQPLKLTKKEQKKLRTQRRLAREKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTRLEKEIRSAAAEREQAHI- 460 (625)
Q Consensus 382 ~~~plyLTKKEqKKLRRqrR~e~~KEkQdKIRLGL~PPPpPKVKLSNLMrVLg~eAV~DPTkvEa~VR~QmeeR~~~He- 460 (625)
....|-||..-+.+||..+...+.. .. .+--..+ .-|..++..+ --|+.+|++.+.+..+.+.....
T Consensus 28 m~~~L~LT~eQ~~qir~i~~~~r~~---------~~-~~~~~~r-~~l~~Li~a~-~fDeaav~al~~~~~~~~~e~~~~ 95 (138)
T 3oeo_A 28 MFKDLNLTDAQKQQIREIMKGQRDQ---------MK-RPPLEER-RAMHDIITSD-TFDKVKAEAQIAKMEEQRKANMLA 95 (138)
T ss_dssp --CCSCCCTTHHHHHHHHHHHHSSS---------SC-CCCTTHH-HHHHHHHTCS-SCCHHHHHHHHGGGSHHHHHHHHH
T ss_pred HHhcCCCCHHHHHHHHHHHHHHHHH---------HH-HHHHHHH-HHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHH
Confidence 4567999999999999765444321 11 1111111 2344444443 34777766666554443332222
Q ss_pred ---HHHHhcc-CCHHHHH
Q 006926 461 ---DRNIARK-LTPAERR 474 (625)
Q Consensus 461 ---~~NeeRK-LT~EqRr 474 (625)
-+|.-+. ||||||.
T Consensus 96 ~~~~~~~~~~vLTPEQr~ 113 (138)
T 3oeo_A 96 HMETQNKIYNILTPEQKK 113 (138)
T ss_dssp HHHHHHHHHTTSCHHHHH
T ss_pred HHHHHHHHHHhCCHHHHH
Confidence 2355555 9999974
Done!