BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006927
(625 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8RJP2|RHIE_DICD3 Rhamnogalacturonate lyase OS=Dickeya dadantii (strain 3937) GN=rhiE
PE=1 SV=1
Length = 578
Score = 138 bits (347), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 159/640 (24%), Positives = 259/640 (40%), Gaps = 114/640 (17%)
Query: 2 SDSSVQLQIQDHHVVMDNGLLQVTISKPDGHVTRIQGYGIDNMLEV----RNKETNRGYW 57
+ +V+L + + +DNGLL+V DG + G + + + R+ + NR ++
Sbjct: 25 ATGAVKLTLDGMNSTLDNGLLKVRFGA-DGSAKEVWKGGTNLISRLSGAARDPDKNRSFY 83
Query: 58 DLVWSETGSTGTTGTDELIKGSDFRVIVENEEQVEISFTRMWDISLQDKLAPLNIDKRYI 117
+S G +E + VI + +QV +++ + D+ L ++ I
Sbjct: 84 LDYYS-------GGVNEFVP-ERLEVIKQTPDQVHLAY-------IDDQNGKLRLEYHLI 128
Query: 118 MLGNTSGFYSYAIYEHMGEWPAFNLPQTRMVFKL---RKDKCKELAFPEAVLLVNPIE-- 172
M + SG YSY + + G P + + R V++ R D LL + +E
Sbjct: 129 MTRDVSGLYSYVVAANTGSAPV-TVSELRNVYRFDATRLDTLFNSIRRGTPLLYDELEQL 187
Query: 173 PEF--------NGEVDDKYQYSCENRNLKVHGWICSDPAVGFWQITPSNEFRSGGPLKQN 224
P+ +G V KY ++ R + W G W + S E+ SG LKQ
Sbjct: 188 PKVQDETWRLPDGSVYSKYDFAGYQRESRY--WGVMGNGYGAWMVPASGEYYSGDALKQE 245
Query: 225 LTSHVGPITLAMFLSAHYGGEDLVLKLKQDEPWKKVLGPVFFYINSFLDSDSDDPKAWLW 284
L H I L +H+G D+V + ++K+ GP YIN D + L
Sbjct: 246 LLVHQDAIILNYLTGSHFGTPDMVAQ----PGFEKLYGPWLLYINQGNDRE-------LV 294
Query: 285 EDAKQQTLNESESWPYSFPASEDFPKWNQRGNISGRLQVQDRYVSDDYITVDGAYVGLAP 344
D ++ +E SWPY + +P+ QR +SGRL+ + + +
Sbjct: 295 ADVSRRAEHERASWPYRWLDDARYPR--QRATVSGRLR------------TEAPHATVVL 340
Query: 345 SGDAGSWQTECKGYQFWTTTDADGFFSISDILVGDYNLYAFVPGF--IGDYRNDVVLTIT 402
+ A ++ + GY F T+ DG FS+S++ G+Y L A+ G IG V
Sbjct: 341 NSSAENFDIQTTGYLFSARTNRDGRFSLSNVPPGEYRLSAYADGGTQIGLLAQQTVR--V 398
Query: 403 EDSDIDMGDLVFEPIRDGPTLWEIGIPSRSAAEFYIPDPDPTYVNKLYVNHPDRFRQYGL 462
E +G + + + P W IG R A EF D+ RQY
Sbjct: 399 EGKKTRLGQI--DARQPAPLAWAIGQADRRADEF---------------RFGDKPRQY-- 439
Query: 463 WERYSDLYPEGDLVYTVGVSDYKNDWFYAQVPRKKDDNSYEATTWQIKFKLDSVDQNATY 522
R+ P DL + +G S + DW+YAQ + +W I F + +Q T
Sbjct: 440 --RWQTEVP-ADLTFEIGKSRERKDWYYAQT---------QPGSWHILFNTRTPEQPYTL 487
Query: 523 KLRIALAT-------ANVAELQVRVNDEKAEPPLFATGQIGHDNAIARHGIH-GLYRLYS 574
+ IA A+ A+ +L V++N + L T + +D +I R + G Y
Sbjct: 488 NIAIAAASNNGMTTPASSPQLAVKLNGQ-----LLTTLKYDNDKSIYRGAMQSGRYHEAH 542
Query: 575 MDVPAANLAAGENTIFLKQATSSSAVAGVMYDYIRFEGPP 614
+ +PA L G N I L+ VMYD I P
Sbjct: 543 IPLPAGALQQGGNRITLELLGGM-----VMYDAITLTETP 577
>sp|Q5AZ85|RGLB_EMENI Rhamnogalacturonate lyase B OS=Emericella nidulans (strain FGSC A4
/ ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=rglB
PE=2 SV=2
Length = 660
Score = 90.5 bits (223), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 168/682 (24%), Positives = 265/682 (38%), Gaps = 131/682 (19%)
Query: 12 DHHVVMDNGLLQVTISKPDGHVTRIQGYGIDNMLEVRNKETNRG-YWDLVWSETG--STG 68
D +V++N L+ T K G + + G D L ++ T G Y D + +G + G
Sbjct: 26 DTSIVLENDRLRATFDKGRGSIIDLYLDGQD-FLGPQSGSTGIGPYLDCYCTPSGFYTAG 84
Query: 69 TTG-TDELIKGSDFRVIVENEEQVEISFTRMWDISLQDKLAPLN--IDKRYIMLGNTSGF 125
+T EL++G+D + T+ I L D P + + + +GF
Sbjct: 85 STNPVTELVQGTD------------STGTKYAGIILNDTYTPTGQEFQQYWFLRDGETGF 132
Query: 126 YSYAIYEHMGEWPAF--NLPQTRMVFKLRKD----------KCKELAFPEAV---LLVNP 170
+ ++ + E F NL + R +F+ D + L EA+ ++V
Sbjct: 133 HMFSRLAYYNETTPFLRNLQELRTLFRPNTDLWTHLTSSDLQTAPLPSDEAIAEQIVVQD 192
Query: 171 IEPEFNGEVDD-----------KYQYSCENRNLKVHGWIC----SDPAV-GFWQITPSNE 214
N DD KY +S R+ VHG SD G W + + +
Sbjct: 193 ATWRLNNTPDDAYYQQFSEYFTKYTFSNHWRDNDVHGLYADGSTSDGTTYGAWLVMNTKD 252
Query: 215 FRSGGPLKQNLTSHVGPITLAMFLSAHYGGEDLVLKLKQDEPWKKVLGPVFFYINSFLDS 274
GGPL +LT V I +S H+G + D + GP F+ N S
Sbjct: 253 TYYGGPLHSDLT--VDGIIYNYIVSNHHGEGTPNITNGFD----RTFGPQFYLFNGGGSS 306
Query: 275 DSDDPKAWLWEDAKQQTLNESESWPYSFPASE-----DFPKWNQRGNISGRLQVQDRYVS 329
++ L ++A+ S SW F S + +QRG++ G +++ S
Sbjct: 307 SLEE----LRDEARSLA---SPSWNADFYDSIAKHVIGYVPSSQRGSVKGTIKLPKNAKS 359
Query: 330 D-DYITVDGAYV---GLAPSGDAGSWQTECKGYQFWTTTDADGFFSISDILVGDYNLYAF 385
+TVDG Y PS +Q+W D +G FSI ++ G Y L +
Sbjct: 360 PIAVLTVDGHYFQDNSAVPSS-----------HQYWADIDKNGRFSIDRVVAGKYRLTVY 408
Query: 386 VPGFIGDY-RNDVVLTITEDSDIDMGDLVFEPIRDGPTLWEIGIPSRSAAEF-YIPDPDP 443
G GD+ R+ +V+ + + I ++P G +W +G P +S+ EF + DP
Sbjct: 409 ADGIFGDFTRDGIVVKARKSTSIKE---TWKPESAGTEIWRLGTPDKSSGEFRHGAARDP 465
Query: 444 TYVNKLYVNHPDRFRQY-GLWERYSDLYPEGDLVYTVGVSDYKNDW------FYAQVPRK 496
T + HP + Y G ++ SD G + Y +G SD D+ + P
Sbjct: 466 T-----HPRHPPEYLIYWGAYDWQSDF--PGGIDYMIGESDPATDFNTVHWAVFGPTPDN 518
Query: 497 KDDNSYEATTWQIKFKLDSVDQNA--TYKLRIALATANVAE--------------LQVRV 540
S W+I+F L + +A T L I LA A A L +R
Sbjct: 519 PVAESNTTHDWRIRFDLSAKQLHARKTATLTIQLAGAKAASGNTDVYNASEPYANLPLRS 578
Query: 541 NDEKAEPPLFATGQIGHD---NAIARHGIHGLYRLYSMDVPAANLAAGENTIFLKQATSS 597
+ E PL T IG+D + I R + + PA+ L G N + L T+
Sbjct: 579 YINEQEEPL--TMVIGYDQSSSCIVRSAVSCYQVREKWEFPASWLKEGSNLLRLSLPTNG 636
Query: 598 ----SAV----AGVMYDYIRFE 611
SAV V YD +R E
Sbjct: 637 TNYESAVLPTSVYVQYDALRLE 658
>sp|B8N5T6|RGLB_ASPFN Probable rhamnogalacturonate lyase B OS=Aspergillus flavus (strain
ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC
167) GN=rglB PE=3 SV=1
Length = 663
Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 153/670 (22%), Positives = 250/670 (37%), Gaps = 111/670 (16%)
Query: 15 VVMDNGLLQVTISKPDGHVTRIQGYGIDNMLEVRNKETNRGYWDLVWSETGSTGTTGTD- 73
+ + N L T +K G V+ + G D + + Y D +G TD
Sbjct: 30 ITLANDRLTSTFAKDKGRVSELFLDGQDLLGPISGNTGVGPYLDCYCIPSGFYTAGSTDP 89
Query: 74 --ELIKGSD-----FRVIVENEEQVEIS--FTRMWDISLQDKLAPLNIDKRYIMLGNTSG 124
E+++G+D + ++ N+ F + W L+D L+ R T+
Sbjct: 90 RLEVVQGTDSTGTKYAGVILNDTYTPTGQQFQQYW--FLRDGETGLHTFSRLAYYNETTP 147
Query: 125 FYSYAIYEHMGEWPAFNLPQTRMVFKLRKDKCKELAFPEAVLLVNPIEPE-----FNGEV 179
F ++ E+ P T + L + + P + N + + FN
Sbjct: 148 FL-----RNLQEFRTLFRPNTELWTHLTSSEAQTAPLPSKEAIANEVVVQDATWRFNNTP 202
Query: 180 DDKY---------QYSCEN--RNLKVHGWIC-----SDPAVGFWQITPSNEFRSGGPLKQ 223
+D Y +Y+ N R+ VHG + G W + + + GGPL
Sbjct: 203 NDAYYTQFSEYFTKYTFSNLWRDNSVHGLYADGTNSNGTTYGAWLVMNTKDTYYGGPLHS 262
Query: 224 NLTSHVGPITLAMFLSAHYGGEDLVLKLKQDEPWKKVLGPVFFYINSFLDSDSDDPKAWL 283
+LT V I +S H+G + D + GP ++ N S S
Sbjct: 263 DLT--VDGIVYNYLVSNHHGEGTPNITNGFD----RTFGPQYYLFNGGKGSKSS------ 310
Query: 284 WEDAKQQTLNESE-SWPYSFPASE-----DFPKWNQRGNISGRLQV---QDRYVSDDYIT 334
ED + + ++ W F S + ++RG++ G++++ R ++ +T
Sbjct: 311 LEDLRSEAETLADPGWNADFYDSIAKHVIGYAPSSKRGSVQGQVKLPKGSTRPIA--ILT 368
Query: 335 VDGAYVGLAPSGDAGSWQTECKGYQFWTTTDADGFFSISDILVGDYNLYAFVPGFIGDYR 394
VDG Y E +Q+W DG F + + G Y L F G GD+
Sbjct: 369 VDGQYFQ--------DNSVEASSHQYWAEMGQDGTFQLDHVKEGKYRLTVFADGIFGDFV 420
Query: 395 NDVVLTITEDSDIDMGDLVFEPIRDGPTLWEIGIPSRSAAEFYIPD-PDPTYVNKLYVNH 453
+D V + + +E G +W +G P +S+ EF D PDPT+ ++
Sbjct: 421 HDGVE--VQAGKVTKVQETWEQESAGVEVWRLGTPDKSSGEFLHGDAPDPTHP----LHP 474
Query: 454 PDRFRQYGLWERYSDLYPEGDLVYTVGVSDYKNDW------FYAQVPRKKDDNSYEATTW 507
P F +G ++ D +P G + YT+G SD D+ Y P D W
Sbjct: 475 PQHFIYWGAYDWQQD-FPNG-VNYTIGSSDPAVDFNTVHWSVYGPTPANPDVEYDTTHDW 532
Query: 508 QIKFKLDS--VDQNATYKLRIALATANVA----------------ELQVRVNDEKAEPPL 549
I F LD + Q T L I LA A A L+ +N++K EP
Sbjct: 533 TINFSLDKKQLQQRKTATLTIQLAGAKTAAGNTDVYNATEPYANLALESYINEQK-EPLT 591
Query: 550 FATGQIGHDNAIARHGIHGLYRLYSMDVPAANLAAGENTIFL---KQAT--SSSAVAG-- 602
G + I R + M+ PA L G N + L + AT ++ + G
Sbjct: 592 LLVGFNQSSSCIVRSAVSCYQVRSRMEFPADWLNVGNNVLTLHLPRNATDYETAVLPGTV 651
Query: 603 -VMYDYIRFE 611
V YD +R E
Sbjct: 652 YVQYDALRLE 661
>sp|A1D144|RGLB_NEOFI Probable rhamnogalacturonate lyase B OS=Neosartorya fischeri
(strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181)
GN=rglB PE=3 SV=1
Length = 658
Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 164/692 (23%), Positives = 260/692 (37%), Gaps = 138/692 (19%)
Query: 4 SSVQLQIQDHHVVMDNGLLQVTISKPDGHVTRIQGYGIDNMLEVRNKETNRG-YWDLVWS 62
+++Q+ D + ++N + SK G V + G D +L ++ T G Y D
Sbjct: 19 AALQIAEDDSTITLNNDRFKAVWSKSKGSVVDMFLDGQD-LLGPQSGSTGIGPYLDCYCV 77
Query: 63 ETG--STGTT--------GTDELIKGSDFRVIVENEEQVEIS--FTRMWDISLQDKLAPL 110
+G + G T GTD G+++ ++ N+ F + W L+D L
Sbjct: 78 PSGFYTAGATNPRMQYVEGTDS--TGTNYAGVILNDTYTPTGQQFQQYW--FLRDGETGL 133
Query: 111 NIDKRYIMLGNTSGFYSYAIYEHMGEWPAFNLPQTRMVFKLRKDKCKELAFPE--AV--- 165
++ R T+ F ++ E+ P T++ L + + P AV
Sbjct: 134 HMFSRLAYYNETTPFL-----RNLQEFRTLFRPNTQLWTHLTSSELQTAPLPSKNAVSKQ 188
Query: 166 LLVNPIEPEFNGEVDD-----------KYQYSCENRNLKVHGWI-----CSDPAVGFWQI 209
++V FN DD KY +S + R+ VHG + G W +
Sbjct: 189 VVVQDATWRFNNTPDDAYYTQFSEYFTKYTFSNQWRDNDVHGLYGDGTNSNGSTYGAWLV 248
Query: 210 TPSNEFRSGGPLKQNLTSHVGPITLAMFLSAHYGGEDLVLKLKQDEPWKKVLGPVFFYIN 269
+ GPL +LT V I +S H+G + D + GP F+ N
Sbjct: 249 -----MNTKGPLHSDLT--VDGIVYNYIVSNHHGEGTPNITNGFD----RTFGPQFYLFN 297
Query: 270 SFLDSDSDDPKAWLWEDAKQQTLNESE-SWPYSFPAS-----EDFPKWNQRGNISGRLQV 323
S S +D + + ++ SW F S + ++RG++ GR+++
Sbjct: 298 GGKGSTSS------LQDLRSEAAKLADPSWNAEFYDSIAKHVVGYVPSSKRGSVDGRVKL 351
Query: 324 QDRYVSDDYI-TVDGAYV---GLAPSGDAGSWQTECKGYQFWTTTDADGFFSISDILVGD 379
+ I TVDG Y + PS YQ+WT D G F I ++ G
Sbjct: 352 PKGATNPIAILTVDGQYFQDNSVVPSS-----------YQYWTDIDTSGKFRIDRVVEGK 400
Query: 380 YNLYAFVPGFIGDYRNDVV-------LTITEDSDIDMGDLVFEPIRDGPTLWEIGIPSRS 432
Y L + G GD+ D V T+ E D + G +W +G P +S
Sbjct: 401 YRLTVYADGIFGDFVRDGVTVKAGKTTTVKEKWDAESA---------GKEVWRLGTPDKS 451
Query: 433 AAEF-YIPDPDPTYVNKLYVNHPDRFRQYGLWERYSDLYPEGDLVYTVGVSDYKNDW--- 488
+ EF + DPT+ ++ P+ +G ++ SDL P+G + Y +G SD D+
Sbjct: 452 SGEFRHGVARDPTHP----LHPPEYLIYWGAYDWQSDL-PKG-IDYRIGSSDPATDFNTV 505
Query: 489 ---FYAQVPRKKDDNSYEATTWQIKFKLDSVDQNATYK--LRIALATANVAELQVRV--- 540
+ P D W+I F L + K L I LA A A V
Sbjct: 506 HWSVFGPTPDNPDVEYNTTHDWKINFSLTKKQLRNSKKATLTIQLAGAKTASGNTDVYNA 565
Query: 541 -------------NDEKAEPPLFATGQIGHDNAIARHGIHGLYRLYSMDVPAANLAAGEN 587
ND+K EP F G + I R + M+ PA L GEN
Sbjct: 566 SEPYINLSHESYINDQK-EPLSFVIGFNQSSSCIVRSAVSCYQVRSRMEFPADWLKVGEN 624
Query: 588 TIFLKQATSSS--------AVAGVMYDYIRFE 611
T+ L +++ A V YD +R E
Sbjct: 625 TLTLHLPYNATDTETAILPATVYVQYDALRLE 656
>sp|Q4WR79|RGLB_ASPFU Probable rhamnogalacturonate lyase B OS=Neosartorya fumigata
(strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100)
GN=rglB PE=3 SV=1
Length = 658
Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 144/614 (23%), Positives = 233/614 (37%), Gaps = 126/614 (20%)
Query: 71 GTDELIKGSDFRVIVENEEQVEIS--FTRMWDISLQDKLAPLNIDKRYIMLGNTSGFYSY 128
GTD G+ + ++ N+ F + W L+D L++ R T+ F
Sbjct: 96 GTDS--TGTKYAGVILNDTYTPTGQQFQQYW--FLRDGETGLHMFSRLAYYNETTPFL-- 149
Query: 129 AIYEHMGEWPAFNLPQTRMVFKLRKDKCKELAFPE--AV---LLVNPIEPEFNGEVDD-- 181
++ E+ P T++ L + + P AV ++V FN DD
Sbjct: 150 ---RNLQEFRTLFRPNTQLWTHLTSSELQTAPLPSKNAVSKQVVVQDATWRFNNTPDDAY 206
Query: 182 ---------KYQYSCENRNLKVHGWI-----CSDPAVGFWQITPSNEFRSGGPLKQNLTS 227
KY +S + R+ VHG + G W + + GPL +LT
Sbjct: 207 YTQFSEYFTKYTFSNQWRDNDVHGLYGDGTNSNGSTYGAWLV-----MNTKGPLHSDLT- 260
Query: 228 HVGPITLAMFLSAHYGGEDLVLKLKQDEPWKKVLGPVFFYINSFLDSDSDDPKAWLWEDA 287
V I +S H+G + D + GP F+ N S S +D
Sbjct: 261 -VDGIVYNYIVSNHHGEGTPNITNGFD----RTFGPQFYLFNGGKGSTSS------LQDL 309
Query: 288 KQQTLNESE-SWPYSFPAS-----EDFPKWNQRGNISGRLQVQDRYVSDDYI-TVDGAYV 340
+ + ++ SW F S + ++RG++ GR+++ + I TVDG Y
Sbjct: 310 RSEAAKLADPSWNAEFYDSIAKHVVGYVPSSKRGSVDGRIKLPKGASNPIAILTVDGQYF 369
Query: 341 ---GLAPSGDAGSWQTECKGYQFWTTTDADGFFSISDILVGDYNLYAFVPGFIGDYRNDV 397
+ PS YQ+WT D G F I ++ G Y L + G GD+ D
Sbjct: 370 QDNSVVPSS-----------YQYWTDIDTSGRFRIDRVVEGKYRLTVYADGIFGDFVRDG 418
Query: 398 V-------LTITEDSDIDMGDLVFEPIRDGPTLWEIGIPSRSAAEF-YIPDPDPTYVNKL 449
V T+ E D + G +W +G P +S+ EF + DPT+
Sbjct: 419 VTVRAGKTTTVKEKWDAESA---------GKEIWRLGTPDKSSGEFRHGVARDPTHP--- 466
Query: 450 YVNHPDRFRQYGLWERYSDLYPEGDLVYTVGVSDYKNDW------FYAQVPRKKDDNSYE 503
++ P+ +G ++ SD +P+G + YT+G SD D+ + P +
Sbjct: 467 -LHPPEYLIYWGAYDWQSD-FPKG-IDYTIGSSDPATDFNTVHWSVFGPTPDNPNVEYNT 523
Query: 504 ATTWQIKFKLDSV----DQNATYKLRIA---LATANVAELQVR-----------VNDEKA 545
W+I F L + AT +++A A+ N E + +ND+K
Sbjct: 524 THDWKINFSLTKKQLRNSKKATLTIQLAGAKTASGNTDEYKASEPYINLIHESYINDQK- 582
Query: 546 EPPLFATGQIGHDNAIARHGIHGLYRLYSMDVPAANLAAGENTIFLKQATSSS------- 598
EP F G + I R + M+ PA L GENT+ L +++
Sbjct: 583 EPLSFVIGFNQSSSCIVRSAVSCYQVRSRMEFPADWLKVGENTLTLHLPYNATDTETAIL 642
Query: 599 -AVAGVMYDYIRFE 611
A V YD +R E
Sbjct: 643 PATVYVQYDALRLE 656
>sp|B0XPA2|RGLB_ASPFC Probable rhamnogalacturonate lyase B OS=Neosartorya fumigata
(strain CEA10 / CBS 144.89 / FGSC A1163) GN=rglB PE=3
SV=1
Length = 658
Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 144/614 (23%), Positives = 233/614 (37%), Gaps = 126/614 (20%)
Query: 71 GTDELIKGSDFRVIVENEEQVEIS--FTRMWDISLQDKLAPLNIDKRYIMLGNTSGFYSY 128
GTD G+ + ++ N+ F + W L+D L++ R T+ F
Sbjct: 96 GTDS--TGTKYAGVILNDTYTPTGQQFQQYW--FLRDGETGLHMFSRLAYYNETTPFL-- 149
Query: 129 AIYEHMGEWPAFNLPQTRMVFKLRKDKCKELAFPE--AV---LLVNPIEPEFNGEVDD-- 181
++ E+ P T++ L + + P AV ++V FN DD
Sbjct: 150 ---RNLQEFRTLFRPNTQLWTHLTSSELQTAPLPSKNAVSKQVVVQDATWRFNNTPDDAY 206
Query: 182 ---------KYQYSCENRNLKVHGWI-----CSDPAVGFWQITPSNEFRSGGPLKQNLTS 227
KY +S + R+ VHG + G W + + GPL +LT
Sbjct: 207 YTQFSEYFTKYTFSNQWRDNDVHGLYGDGTNSNGSTYGAWLV-----MNTKGPLHSDLT- 260
Query: 228 HVGPITLAMFLSAHYGGEDLVLKLKQDEPWKKVLGPVFFYINSFLDSDSDDPKAWLWEDA 287
V I +S H+G + D + GP F+ N S S +D
Sbjct: 261 -VDGIVYNYIVSNHHGEGTPNITNGFD----RTFGPQFYLFNGGKGSTSS------LQDL 309
Query: 288 KQQTLNESE-SWPYSFPAS-----EDFPKWNQRGNISGRLQVQDRYVSDDYI-TVDGAYV 340
+ + ++ SW F S + ++RG++ GR+++ + I TVDG Y
Sbjct: 310 RSEAAKLADPSWNAEFYDSIAKHVVGYVPSSKRGSVDGRIKLPKGASNPIAILTVDGQYF 369
Query: 341 ---GLAPSGDAGSWQTECKGYQFWTTTDADGFFSISDILVGDYNLYAFVPGFIGDYRNDV 397
+ PS YQ+WT D G F I ++ G Y L + G GD+ D
Sbjct: 370 QDNSVVPSS-----------YQYWTDIDTSGRFRIDRVVEGKYRLTVYADGIFGDFVRDG 418
Query: 398 V-------LTITEDSDIDMGDLVFEPIRDGPTLWEIGIPSRSAAEF-YIPDPDPTYVNKL 449
V T+ E D + G +W +G P +S+ EF + DPT+
Sbjct: 419 VTVRAGKTTTVKEKWDAESA---------GKEIWRLGTPDKSSGEFRHGVARDPTHP--- 466
Query: 450 YVNHPDRFRQYGLWERYSDLYPEGDLVYTVGVSDYKNDW------FYAQVPRKKDDNSYE 503
++ P+ +G ++ SD +P+G + YT+G SD D+ + P +
Sbjct: 467 -LHPPEYLIYWGAYDWQSD-FPKG-IDYTIGSSDPATDFNTVHWSVFGPTPDNPNVEYNT 523
Query: 504 ATTWQIKFKLDSV----DQNATYKLRIA---LATANVAELQVR-----------VNDEKA 545
W+I F L + AT +++A A+ N E + +ND+K
Sbjct: 524 THDWKINFSLTKKQLRNSKKATLTIQLAGAKTASGNTDEYKASEPYINLIHESYINDQK- 582
Query: 546 EPPLFATGQIGHDNAIARHGIHGLYRLYSMDVPAANLAAGENTIFLKQATSSS------- 598
EP F G + I R + M+ PA L GENT+ L +++
Sbjct: 583 EPLSFVIGFNQSSSCIVRSAVSCYQVRSRMEFPADWLKVGENTLTLHLPYNATDTETAIL 642
Query: 599 -AVAGVMYDYIRFE 611
A V YD +R E
Sbjct: 643 PATVYVQYDALRLE 656
>sp|A5ABH4|RGLB_ASPNC Probable rhamnogalacturonate lyase B OS=Aspergillus niger (strain
CBS 513.88 / FGSC A1513) GN=rglB PE=3 SV=1
Length = 706
Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 111/450 (24%), Positives = 174/450 (38%), Gaps = 72/450 (16%)
Query: 182 KYQYSCENRNLKVHGW-----ICSDPAVGFWQITPSNEFRSGGPLKQNLTSHVGPITLAM 236
KY +S R+ VHG + G W + + + GGPL +LT V I
Sbjct: 216 KYTFSNAWRDNSVHGMYADGSTSNGSTFGAWLVMNTKDTYYGGPLHSDLT--VDGIVYNY 273
Query: 237 FLSAHYGGEDLVLKLKQDEPWKKVLGPVFFYINSFLDSDSDDPKAWLWEDAKQQTLNESE 296
+S H+G + D + GP +++ N S A L E
Sbjct: 274 LVSNHHGEGTPNITYGFD----RTFGPQYYHFNGGKGS-----TASLQELKSDAETLADP 324
Query: 297 SWPYSFPAS-----EDFPKWNQRGNISGRLQVQDRYVSD-DYITVDGAYVGLAPSGDAGS 350
SW F S + +QRG++ G++++ +TVDG Y
Sbjct: 325 SWNVDFYDSIAKHVVGYTPSSQRGSVQGKIKLPKGATRPIAVLTVDGQYFQ--------D 376
Query: 351 WQTECKGYQFWTTTDADGFFSISDILVGDYNLYAFVPGFIGDY-RNDVVLTITEDSDIDM 409
YQ+W D G FS+ + G Y L + G GD+ R+ V + + + I
Sbjct: 377 NSVNSSSYQYWAEIDDSGHFSVDHVKEGPYRLTVYADGIFGDFVRDGVQVKAGKKTTIQE 436
Query: 410 GDLVFEPIRDGPTLWEIGIPSRSAAEF-YIPDPDPTYVNKLYVNHPDRFRQYGLWERYSD 468
+E G +W +G P +S+ EF + DPT+ ++ P+ +G ++ SD
Sbjct: 437 ---TWEAESAGTEIWRLGTPDKSSGEFRHGVARDPTHP----LHPPEYLIYWGAYDWQSD 489
Query: 469 LYPEGDLVYTVGVSDYKND-----WFY----AQVPRKKDDNSYEATTWQIKFKL--DSVD 517
+P+G + YT+G SD D W PR + D +++ W I F L D +
Sbjct: 490 -FPDG-INYTIGTSDPATDLNTVHWSVFGPTPNDPRVEYDTTHD---WTINFPLSEDDLA 544
Query: 518 QNATYKLRIALATANVAE----------------LQVRVNDEKAEPPLFATGQIGHDNAI 561
+ + L I LA A A L+ +ND+ AEP G + I
Sbjct: 545 ERSKATLTIQLAGAKAASGNTDVYNASEPYTNLALESYINDQ-AEPLTLLIGFNQSSSCI 603
Query: 562 ARHGIHGLYRLYSMDVPAANLAAGENTIFL 591
R + M+ PA L G N + L
Sbjct: 604 VRSAVSCYQVRSRMEFPADWLKVGNNVLTL 633
>sp|Q0C7K7|RGLB_ASPTN Probable rhamnogalacturonate lyase B OS=Aspergillus terreus (strain
NIH 2624 / FGSC A1156) GN=rglB PE=3 SV=1
Length = 660
Score = 76.3 bits (186), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 113/476 (23%), Positives = 187/476 (39%), Gaps = 78/476 (16%)
Query: 182 KYQYSCENRNLKVHGW-----ICSDPAVGFWQITPSNEFRSGGPLKQNLTSHVGPITLAM 236
KY +S R+ VHG + G W + + + GGPL +LT V I
Sbjct: 215 KYTFSNAWRDNNVHGLYADGSTSNGTTFGAWLVMNTKDTYYGGPLHSDLT--VDGIVYNY 272
Query: 237 FLSAHYGGEDLVLKLKQDEPWKKVLGPVFFYINSFLDSDSDDPKAWLWEDAKQQTLNESE 296
+S H+G + D + GP F+ N S ++ ++ + ++L +
Sbjct: 273 IVSNHHGEGTPNITNGFD----RTFGPQFYLFNGGGSSSLNELRS------EAESLAD-P 321
Query: 297 SWPYSFPAS-----EDFPKWNQRGNISGRLQV---QDRYVSDDYITVDGAYVGLAPSGDA 348
SW F S + ++RG++ G++++ R ++ +TVDG Y
Sbjct: 322 SWNVEFYDSIAKHVVGYVPSSKRGSVQGQIKLPRGATRPIA--ILTVDGQYFQ------- 372
Query: 349 GSWQTECKGYQFWTTTDADGFFSISDILVGDYNLYAFVPGFIGDYRNDVVLTITEDSDID 408
+ + YQ+W DA+G F + ++ G Y L + G GDY D V +
Sbjct: 373 -DNSVDPRSYQYWVEMDANGKFQLDHVVEGKYRLTVYADGIFGDYVRDGV-QVRGRKTTR 430
Query: 409 MGDLVFEPIRDGPTLWEIGIPSRSAAEF-YIPDPDPTYVNKLYVNHPDRFRQYGLWERYS 467
+ D ++P G +W +G P +S+ EF + DPT+ ++ P+ +G ++
Sbjct: 431 IND-SWQPESAGVEVWRLGTPDKSSGEFLHGVARDPTHP----LHPPEYLIYWGAYDWQQ 485
Query: 468 DLYPEGDLVYTVGVSDYKNDW------FYAQVPRKKDDNSYEATTWQIKFKL--DSVDQN 519
D +P G + YT+G SD D+ + P D W I F L + +
Sbjct: 486 D-FPNG-VNYTIGSSDPATDFNTVHWSVFGPTPDNPDVEYDTTHDWAINFSLTKKQLQKR 543
Query: 520 ATYKLRIALATANVAE----------------LQVRVNDEKAEPPLFATGQIGHDNAIAR 563
T L I LA A A L+ +N ++ EP G + I R
Sbjct: 544 KTATLTIQLAGAKTASGNTDVYKPDEPYTNLALESYIN-QQEEPLTMLIGFNQSSSCIVR 602
Query: 564 HGIHGLYRLYSMDVPAANLAAGENTIFLKQATSSSAVAG--------VMYDYIRFE 611
+ M PA L G NT+ L +++ V V YD +R E
Sbjct: 603 SAVSCYQVRSRMTFPADWLQVGSNTLTLHLPRNATDVEDAILPGTVYVQYDALRLE 658
>sp|Q2U5P7|RGLC_ASPOR Probable rhamnogalacturonate lyase C OS=Aspergillus oryzae (strain
ATCC 42149 / RIB 40) GN=rglC PE=3 SV=1
Length = 695
Score = 59.7 bits (143), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 146/663 (22%), Positives = 241/663 (36%), Gaps = 119/663 (17%)
Query: 14 HVVMDNGLLQVTISKPDGHVTRIQGYGIDNMLEVRNKETNRGYWDLVWSETG--STGTTG 71
H + N + ++K +GH+ +Q G D + V Y D +G + G+
Sbjct: 31 HFNLANDRFSIALAKSNGHIVDVQLDGQDLLGPVDGNAGKGPYLDCSCIPSGFWTPGSGA 90
Query: 72 TDELIKGSDFRVIVENEEQVEISFTRMWDISLQDKLAPLN--IDKRYIMLGNTSGFYSYA 129
ELI G+D + T + + A N + + + + G +G ++++
Sbjct: 91 HLELINGTD------------STGTAYGGLYMSATYAGTNQTLSQWFFLRGEETGLHAFS 138
Query: 130 IYEHMGEW-PAF-NLPQTRMVFKLRKDKCKELAFPEAVLLVNPI----------EPEFNG 177
+ E P+ +L + R +F+ D + + P+ + G
Sbjct: 139 RVTYFNETTPSLRSLGELRTLFRPSTDLWTHFSTSDGNYGPKPLGSNSGLVVQDATTYIG 198
Query: 178 EVDD------------KYQYSCENRNLKVHGWICSDP------AVGFWQITPSNEFRSGG 219
V D KY + RN VHG G W + + E GG
Sbjct: 199 NVTDDPYVSQYSDYFTKYTLAESWRNHDVHGLFSDGSSSSDGSTFGAWLVHNTVETYYGG 258
Query: 220 PLKQNLTSHVGPITLAMFLSAHYGGEDLVLKLKQDEPWKKVLGPVFFYINSFLDSDSDDP 279
PL +L V I +S H+G L D W GP F+Y N DS+
Sbjct: 259 PLHSDLV--VDGIVYNYLVSGHHGAPTPNLTHGFDRTW----GPQFYYFNR---GDSETT 309
Query: 280 KAWLWEDAKQQTLNESESWPYSFPASE--DFPKWNQRGNISGRLQVQDRYVSDDYITVDG 337
A L DA + E + Y A +F R G++ + + I +
Sbjct: 310 LADLRADAAKYADPEWNAEFYDSIADHIPNFTPSTGRTTFKGKVSLP-KGAKRPIIVL-- 366
Query: 338 AYVGLAPSGDAGSWQTEC---KGYQFWTTTDADGFFSISDILVGDYNLYAFVPGFIGDYR 394
S D +Q + Q+W D G FSI ++ G Y + + G +
Sbjct: 367 -------SEDGQDFQLNVFNTESLQYWAEIDKSGSFSIPRVVEGTYRITIYADEIFGWFI 419
Query: 395 NDVVLTITEDSDIDMGDLVFEPIRDGPTLWEIGIPSRSAAEF---YIPDPDPTYVNKLYV 451
D V + S D ++ G +W IGIP +S+ E+ Y PD
Sbjct: 420 QDHVKVLKSQSK-DY-SFTWKEESAGKEIWRIGIPDKSSGEYLHGYAPDTSKPL------ 471
Query: 452 NHPDRFRQYGLWERYSDLYPEGDLVYTVGVSDYKND-------WFYAQVPRKKDDNSYE- 503
P++ R Y Y +PEG + + VG SD D +F +Q + + Y+
Sbjct: 472 -QPEQHRIYWGKYDYPADFPEG-INFHVGKSDPSQDLNYIHWAFFPSQGNHLRTEPYYDN 529
Query: 504 ATTWQIKFKLDSVDQ-----NATYKLRIALA-TAN-----------VAELQVRVN-DEKA 545
W + F L + DQ AT+ ++IA A TAN + L VN + +
Sbjct: 530 VNNWTVTFDL-TADQLHNTNTATFTVQIAGAKTANGNAKWTPVEGKYSNLPWTVNVNGRY 588
Query: 546 EP----PLFATGQIGHDNAIARHGIHGLYRLYSMDVPAANLAAGENTIFLKQATSSSAVA 601
E P + +G G +A++ I + P+ NL G+N L ++S+
Sbjct: 589 ESTWVIPYWRSGSCGVRSAVSCQNIEQKFAF-----PSKNLQEGKNEFVLSLPFNASSTE 643
Query: 602 GVM 604
+
Sbjct: 644 TAL 646
>sp|Q5B5P1|RGLC_EMENI Probable rhamnogalacturonate lyase C OS=Emericella nidulans (strain
FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
GN=rglC PE=3 SV=1
Length = 1041
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 118/568 (20%), Positives = 199/568 (35%), Gaps = 99/568 (17%)
Query: 14 HVVMDNGLLQVTISKPDGHVTRIQGYGIDNMLEVRNKETNRGYWDLVWSETGSTGTTGTD 73
H + N V ++K +GHV G D + + Y D + G
Sbjct: 31 HYTISNSRFSVAVAKSNGHVVDANLDGQDLLGPLSGNSGKGPYLDCSCTPEGFWTPGAEP 90
Query: 74 ELIKGSDFRVIVENEEQVEISFTRMWDISLQDKLAPLNIDKRYIMLGNTSGFYSYAIYEH 133
L+ G+D V + T ++ + Q + + + G +G ++++ +
Sbjct: 91 ALVNGTD----STGTPYVGVIMTDTYETTNQ------TLSQYLFLRGEETGLHAFSRVTY 140
Query: 134 MGEWPAF--NLPQTRMVFKLRKDKCKELAFPEAVLLVNPIEPEFNGEVDD---------- 181
E F L + R +F+ + + E P+ V D
Sbjct: 141 YNESDYFLRGLGELRTLFRPNTNLWTHFSGSEGNYGPMPLSSTEKITVQDATTYLGDTTD 200
Query: 182 ------------KYQYSCENRNLKVHGWICSDPA------VGFWQITPSNEFRSGGPLKQ 223
KY + R+ VHG + G W + + E GGPL
Sbjct: 201 DPYVSQYSDYFTKYTLTESWRDHDVHGHFSNGSTSGDGNTYGAWLVHNTRETYYGGPLHA 260
Query: 224 NLTSHVGPITLAMFLSAHYGGEDLVLKLKQDEPWKKVLGPVFFYINSFLDSDSDDPKAWL 283
+L V I +S HYG + L D + GP +++ NS P L
Sbjct: 261 DLV--VDGIVYNYIVSGHYGAPNPNLTHGFD----RTFGPQYYHFNS------GGPGTTL 308
Query: 284 WEDAKQQTLNESESWPYSF--PASEDFPKW-NQRGNISGRLQVQDRYVSDDYITVDGAYV 340
E S W F ++ P + G + R +V + I V
Sbjct: 309 EELRADAAQYASPEWNAEFYDSIAKHIPNYVPSTGRTTFRGKVNLPKGAKKPIIV----- 363
Query: 341 GLAPSGDAGSWQTEC---KGYQFWTTTDADGFFSISDILVGDYNLYAFVPGFIGDYRNDV 397
S + +Q Q+W D G F+I ++ G Y + + G + D
Sbjct: 364 ---LSENEQDFQLNVFKKDSLQYWAEIDGSGAFTIPRVVKGTYRVTIYADEIFGWFIKDN 420
Query: 398 VLTITEDSDIDMGDLVFEPIRDGPTLWEIGIPSRSAAEF---YIPDPDPTYVNKLYVNHP 454
V I ++ ++ G +W IG+P +S+ EF Y PD P
Sbjct: 421 VKVIGSNAHT----FTWKEETAGKEIWRIGVPDKSSGEFLHGYAPDTSKPL-------QP 469
Query: 455 DRFRQYGLWERY---SDLYPEGDLVYTVGVSDYKND-------WFYAQVPRKKDDNSYE- 503
+++R Y W +Y SD +PEG + Y VG SD D +F +Q +++ Y+
Sbjct: 470 EQYRIY--WGKYDYPSD-FPEG-VNYHVGKSDPAKDLNYIHWSFFPSQGNHLRNEPYYQN 525
Query: 504 ATTWQIKFKLDSVD----QNATYKLRIA 527
W I F L + + AT+ +++A
Sbjct: 526 VNNWTITFDLTASQLRNTKTATFTVQLA 553
>sp|Q2U0Q1|RGLA_ASPOR Probable rhamnogalacturonate lyase A OS=Aspergillus oryzae (strain
ATCC 42149 / RIB 40) GN=rglA PE=3 SV=1
Length = 528
Score = 46.6 bits (109), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 99/245 (40%), Gaps = 40/245 (16%)
Query: 359 QFWTTTDADGFFSISDILVGDYNLYAFVPGFIGDYR---NDVVLTITEDSDIDMGDLVFE 415
Q+WT T +DG F+ + GDY + + G+Y+ V +T+ + D+
Sbjct: 303 QYWTYTSSDGSFTSPAMKPGDYTMVYYQ----GEYKVAETSVSVTVGSSTSKDISG---- 354
Query: 416 PIRDGPTLWEIGIPSRSAAEFYIPDPDPTYVNKLYVNHPDRFRQYGLWERYSDLYPEGDL 475
+ G T+++IG D D T + N ++ R + R S P L
Sbjct: 355 SVETGDTIFKIG------------DWDGTPTG--FRNAENQLRMHPSDSRMSSWGP---L 397
Query: 476 VYTVGVSDYKNDWFYAQVPRKKDDNSYEATTWQIKFKLDSVDQNA-TYKLRIALATANVA 534
YTVG S+ D+ A D + IKF S A T ++ L+ A
Sbjct: 398 TYTVGSSEL-TDFPMAAFKGVNDPVT-------IKFTATSAQTGAATLRIGTTLSFAG-G 448
Query: 535 ELQVRVNDEKAEPPLFATGQIGHDNAIARHGIHGLYRLYSMDVPAANLAAGENTIFLKQA 594
Q +ND + P T + + R GL +Y +++P+ + GENTI +
Sbjct: 449 RPQATINDYEGSAPSAPTNL--NSRGVTRGAYRGLGEVYDVNIPSGTIVEGENTITISVI 506
Query: 595 TSSSA 599
+ SS
Sbjct: 507 SGSSG 511
>sp|B8NCU7|RGLA_ASPFN Probable rhamnogalacturonate lyase A OS=Aspergillus flavus (strain
ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC
167) GN=rglA PE=3 SV=1
Length = 528
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 98/245 (40%), Gaps = 40/245 (16%)
Query: 359 QFWTTTDADGFFSISDILVGDYNLYAFVPGFIGDYR---NDVVLTITEDSDIDMGDLVFE 415
Q+WT T +DG F+ + GDY + + G+Y+ V +T + D+ V
Sbjct: 303 QYWTYTSSDGSFTSPAMKPGDYTMVYYQ----GEYKVAETSVSVTAGSSTSKDISGFV-- 356
Query: 416 PIRDGPTLWEIGIPSRSAAEFYIPDPDPTYVNKLYVNHPDRFRQYGLWERYSDLYPEGDL 475
G T+++IG D D T + N ++ R + R S P L
Sbjct: 357 --ETGDTIFKIG------------DWDGTPTG--FRNAENQLRMHPSDSRMSSWGP---L 397
Query: 476 VYTVGVSDYKNDWFYAQVPRKKDDNSYEATTWQIKFKLDSVDQNA-TYKLRIALATANVA 534
YTVG S+ D+ A D + IKF S A T ++ L+ A
Sbjct: 398 TYTVGSSEL-TDFPMAAFKGVNDPVT-------IKFTATSAQTGAATLRIGTTLSFAG-G 448
Query: 535 ELQVRVNDEKAEPPLFATGQIGHDNAIARHGIHGLYRLYSMDVPAANLAAGENTIFLKQA 594
Q +ND + P T + + R GL +Y +++P+ + GENTI +
Sbjct: 449 RPQATINDYEGSAPSAPTNL--NSRGVTRGAYRGLGEVYDVNIPSGTIVEGENTITISVI 506
Query: 595 TSSSA 599
+ SS
Sbjct: 507 SGSSG 511
>sp|Q0CVU1|RGLA_ASPTN Probable rhamnogalacturonate lyase A OS=Aspergillus terreus (strain
NIH 2624 / FGSC A1156) GN=rglA PE=3 SV=2
Length = 531
Score = 39.7 bits (91), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 93/243 (38%), Gaps = 36/243 (14%)
Query: 359 QFWTTTDADGFFSISDILVGDYNLYAFVPGFIGDYR-NDVVLTITEDSDIDMGDLVFEPI 417
Q+WT T +DG F+ + G Y + + G+YR + +T++ S + +
Sbjct: 303 QYWTYTASDGSFTSPAMKPGTYTMAYYQ----GEYRVAETSVTVSAGSSTTKN--ISGSV 356
Query: 418 RDGPTLWEIGIPSRSAAEFYIPDPDPTYVNKLYVNHPDRFRQYGLWERYSDLYPEGDLVY 477
+ G T+++IG D PT ++N + R + R S P + Y
Sbjct: 357 KTGTTIFKIGDW----------DGQPT----GFLNADKQLRMHPSDSRMSSWGP---VTY 399
Query: 478 TVGVSDYKNDWFYAQVPRKKDDNSYEATTWQIKFKLDSVDQNA-TYKLRIALATANVAEL 536
TVG S P + T IKF S A T ++ L+ A
Sbjct: 400 TVGSSSV------GSFPMALFKSVNSPVT--IKFTATSAQTGAATLRIGTTLSFAG-GRP 450
Query: 537 QVRVNDEKAEPPLFATGQIGHDNAIARHGIHGLYRLYSMDVPAANLAAGENTIFLKQATS 596
Q +N P T + + R GL +Y + +PA + AG NTI + +
Sbjct: 451 QATINSYTGPTPSAPTNL--NSRGVTRGAYRGLGEVYDVSIPAGTIVAGTNTITINVISG 508
Query: 597 SSA 599
SS
Sbjct: 509 SSG 511
>sp|Q4W9T6|RGLA_ASPFU Probable rhamnogalacturonate lyase A OS=Neosartorya fumigata
(strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100)
GN=rglA PE=3 SV=1
Length = 528
Score = 39.7 bits (91), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 103/253 (40%), Gaps = 38/253 (15%)
Query: 359 QFWTTTDADGFFSISDILVGDYNLYAFVPGFIGDYRNDVVLTITEDSDIDMGDLVFEPIR 418
Q+WT T +DG F+ + G Y + + G+Y+ +++ + + +
Sbjct: 303 QYWTYTASDGSFTSPAMKPGTYTMVYYQ----GEYK-VASTSVSVSAGSTTTKNISGSVT 357
Query: 419 DGPTLWEIGIPSRSAAEFYIPDPDPTYVNKLYVNHPDRFRQYGLWERYSDLYPEGDLVYT 478
G T+++IG E+ D PT + N ++ R + R S P L YT
Sbjct: 358 TGKTIFKIG-------EW---DGQPT----GFRNAANQLRMHPSDSRMSSWGP---LTYT 400
Query: 479 VG---VSDYKNDWFYAQVPRKKDDNSYEATTWQIKFKLDSVDQNATYKLRIALATANVAE 535
VG +SD+ F K NS IKF S Q LRI T + A
Sbjct: 401 VGSSSLSDFPMAIF-------KSVNS----PVTIKFTASS-SQTGAATLRIG-TTLSFAG 447
Query: 536 LQVRVNDEKAEPPLFATGQIGHDNAIARHGIHGLYRLYSMDVPAANLAAGENTIFLKQAT 595
+ +V P+ + + + + R GL +Y + +PA + AG NTI + +
Sbjct: 448 GRPQVTVNSWTGPIPSAPKDLNSRGVTRGAYRGLGEVYDVAIPAGTIVAGTNTITISVVS 507
Query: 596 SSSAVAGVMYDYI 608
SS A + ++I
Sbjct: 508 GSSGDAFLSPNFI 520
>sp|B0YEH9|RGLA_ASPFC Probable rhamnogalacturonate lyase A OS=Neosartorya fumigata
(strain CEA10 / CBS 144.89 / FGSC A1163) GN=rglA PE=3
SV=1
Length = 528
Score = 39.7 bits (91), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 103/253 (40%), Gaps = 38/253 (15%)
Query: 359 QFWTTTDADGFFSISDILVGDYNLYAFVPGFIGDYRNDVVLTITEDSDIDMGDLVFEPIR 418
Q+WT T +DG F+ + G Y + + G+Y+ +++ + + +
Sbjct: 303 QYWTYTASDGSFTSPAMKPGTYTMVYYQ----GEYK-VASTSVSVSAGSTTTKNISGSVT 357
Query: 419 DGPTLWEIGIPSRSAAEFYIPDPDPTYVNKLYVNHPDRFRQYGLWERYSDLYPEGDLVYT 478
G T+++IG E+ D PT + N ++ R + R S P L YT
Sbjct: 358 TGKTIFKIG-------EW---DGQPT----GFRNAANQLRMHPSDSRMSSWGP---LTYT 400
Query: 479 VG---VSDYKNDWFYAQVPRKKDDNSYEATTWQIKFKLDSVDQNATYKLRIALATANVAE 535
VG +SD+ F K NS IKF S Q LRI T + A
Sbjct: 401 VGSSSLSDFPMAIF-------KSVNS----PVTIKFTASS-SQTGAATLRIG-TTLSFAG 447
Query: 536 LQVRVNDEKAEPPLFATGQIGHDNAIARHGIHGLYRLYSMDVPAANLAAGENTIFLKQAT 595
+ +V P+ + + + + R GL +Y + +PA + AG NTI + +
Sbjct: 448 GRPQVTVNSWTGPIPSAPKDLNSRGVTRGAYRGLGEVYDVAIPAGTIVAGTNTITISVVS 507
Query: 596 SSSAVAGVMYDYI 608
SS A + ++I
Sbjct: 508 GSSGDAFLSPNFI 520
>sp|A2R2L1|RGLA_ASPNC Probable rhamnogalacturonate lyase A OS=Aspergillus niger (strain
CBS 513.88 / FGSC A1513) GN=rglA PE=3 SV=2
Length = 531
Score = 37.0 bits (84), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 95/248 (38%), Gaps = 46/248 (18%)
Query: 359 QFWTTTDADGFFSISDILVGDYNLYAFVPGFIGDYRNDVVLT--ITEDSDIDMGDLVFEP 416
Q+WT T + G F+ + G Y + + G+Y VV T +T + +
Sbjct: 303 QYWTYTSSSGSFTSPAMKPGTYTMVYYQ----GEY---VVATSEVTVSAGSSTSKDISGS 355
Query: 417 IRDGPTLWEIGIPSRSAAEFYIPDPDPTYVNKLYVNHPDRFRQYGLWERYSDLYPEGDLV 476
+ G T+++IG D PT + N ++ R + R SD P L
Sbjct: 356 VETGTTIFKIGDW----------DGQPT----GFRNAENQLRMHPSDSRMSDWGP---LT 398
Query: 477 YTVGVSDYKNDWFYAQVPRKKDDNSYEATTWQIKFKLDSVDQNATYKLRIALATANVA-E 535
YTVG S + F + + + + IKF S DQ LRI +
Sbjct: 399 YTVGSSSLTD--FPMAIFKSVN------SPVTIKFTATS-DQTGAATLRIGTTLSFAGGR 449
Query: 536 LQVRVNDEKAEPPLFATGQIGHDNAIARHGIHGLYR----LYSMDVPAANLAAGENTIFL 591
Q +ND + P T N +R G YR +Y + VP + GENTI +
Sbjct: 450 PQATINDYEGSAPSAPT------NLDSRGVTRGAYRGYGDVYDVSVPEGTIVEGENTITI 503
Query: 592 KQATSSSA 599
+ SS
Sbjct: 504 SVISGSSG 511
>sp|Q00019|RGLA_ASPAC Rhamnogalacturonate lyase A OS=Aspergillus aculeatus GN=rglA PE=1
SV=1
Length = 527
Score = 36.6 bits (83), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 92/242 (38%), Gaps = 34/242 (14%)
Query: 359 QFWTTTDADGFFSISDILVGDYNLYAFVPGFIGDYRNDVVLTITEDSDIDMGDLVFEPIR 418
Q+WT T + G F+ + G Y + + G+Y ++T + + ++
Sbjct: 302 QYWTYTSSSGSFTSPAMKPGTYTMVYYQ----GEYA-VATSSVTVSAGSTTTKNISGSVK 356
Query: 419 DGPTLWEIGIPSRSAAEFYIPDPDPTYVNKLYVNHPDRFRQYGLWERYSDLYPEGDLVYT 478
G T+++IG E+ D PT + N ++ R + R S P L YT
Sbjct: 357 TGTTIFKIG-------EW---DGQPT----GFRNAANQLRMHPSDSRMSSWGP---LTYT 399
Query: 479 VGVSDYKNDWFYAQVPRKKDDNSYEATTWQIKFKLDSVDQNA-TYKLRIALATANVAELQ 537
VG S + + K +N IKF S A T ++ L+ A Q
Sbjct: 400 VGSSALTD---FPMAVFKSVNNPVT-----IKFTATSAQTGAATLRIGTTLSFAG-GRPQ 450
Query: 538 VRVNDEKAEPPLFATGQIGHDNAIARHGIHGLYRLYSMDVPAANLAAGENTIFLKQATSS 597
+N P T + R GL +Y + +P+ + AG NTI + + S
Sbjct: 451 ATINSYTGSAPAAPTNL--DSRGVTRGAYRGLGEVYDVSIPSGTIVAGTNTITINVISGS 508
Query: 598 SA 599
S
Sbjct: 509 SG 510
>sp|A1D9P9|RGLA_NEOFI Probable rhamnogalacturonate lyase A OS=Neosartorya fischeri
(strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181)
GN=rglA PE=3 SV=1
Length = 528
Score = 36.6 bits (83), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 96/245 (39%), Gaps = 40/245 (16%)
Query: 359 QFWTTTDADGFFSISDILVGDYNLYAFVPGFIGDYRNDVVLTITEDSDIDMGDLVFEPIR 418
Q+WT T +DG F+ + G Y + + G+Y+ +++ + + +
Sbjct: 303 QYWTYTASDGSFTSPAMKPGTYTMVYYQ----GEYK-VASTSVSVSAGSTTTKNISGSVT 357
Query: 419 DGPTLWEIGIPSRSAAEFYIPDPDPTYVNKLYVNHPDRFRQYGLWERYSDLYPEGDLVYT 478
G T+++IG E+ D PT + N ++ R + R + P L YT
Sbjct: 358 TGKTIFKIG-------EW---DGQPT----GFRNAANQLRMHPSDSRMASWGP---LTYT 400
Query: 479 VG---VSDYKNDWFYAQVPRKKDDNSYEATTWQIKFKLDSVDQNATYKLRIALATANVA- 534
VG +SD+ F K NS IKF S Q LRI +
Sbjct: 401 VGSSSLSDFPMAIF-------KSTNS----PVTIKFTASS-SQTGAATLRIGTTLSFAGG 448
Query: 535 ELQVRVNDEKAEPPLFATGQIGHDNAIARHGIHGLYRLYSMDVPAANLAAGENTIFLKQA 594
Q +VN P+ + + + + R G +Y + +PA + AG NTI +
Sbjct: 449 RPQAKVNSFTG--PVPSAPKDLNSRGVTRGAYRGFGEVYDVAIPAGTIVAGTNTITISVV 506
Query: 595 TSSSA 599
+ SS
Sbjct: 507 SGSSG 511
>sp|Q54U31|SHKD_DICDI Dual specificity protein kinase shkD OS=Dictyostelium discoideum
GN=shkD PE=3 SV=1
Length = 744
Score = 35.4 bits (80), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 50/110 (45%), Gaps = 14/110 (12%)
Query: 491 AQVPRKKDDNSYEATTWQIKFK-------------LDSVDQNATYKLRIALATANVAELQ 537
++PRK+ + YE T+++ + K L + Q+ ++ L ++ +L
Sbjct: 303 VKIPRKQKLSLYELTSFRHEVKIMSKIFHPNVVLFLGACTQSGKMQIVTELCQTDLEKL- 361
Query: 538 VRVNDEKAEPPLFATGQIGHDNAIARHGIHGLYRLYSMDVPAANLAAGEN 587
+ + K E LF Q+ D A+ + +HG+ R+ D+ ANL N
Sbjct: 362 LHNDRTKKEFSLFRRMQMAKDAALGMNWLHGITRIVHNDLKTANLLVDIN 411
>sp|Q5AX45|RGLA_EMENI Rhamnogalacturonate lyase A OS=Emericella nidulans (strain FGSC A4
/ ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=rglA
PE=2 SV=1
Length = 527
Score = 35.4 bits (80), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 96/260 (36%), Gaps = 45/260 (17%)
Query: 359 QFWTTTDADGFFSISDILVGDYNLYAFVPGFIGDYRNDVVLTITEDSDIDMGDLVFEPIR 418
Q+WT T +DG F+ + G Y + + F + +T++ S + ++
Sbjct: 303 QYWTYTASDGSFTSPAMKPGTYTMKYYQGEFP---VAETTVTVSAGSSTTKN--ISGSVK 357
Query: 419 DGPTLWEIGIPSRSAAEFYIPDPDPT---YVNKLYVNHPDRFRQYGLWERYSDLYPEGDL 475
G T+++IG E+ D PT +K HP R W
Sbjct: 358 TGTTIFKIG-------EW---DGQPTGFRNADKQLRMHPSDSRM-DSWSS---------- 396
Query: 476 VYTVGVSDYKNDWFYAQVPRKKDDNSYEATTWQIKFKLDSVDQNA-TYKLRIALATANVA 534
YTVG S + + K +N IKF S A T ++ L+ A
Sbjct: 397 TYTVGSSSLSD---FPMAVFKSVNNPV-----TIKFTATSAQTGAATLRIGTTLSFAG-G 447
Query: 535 ELQVRVNDEKAEPPLFATGQIGHDNAIARHGIHGLYRLYSMDVPAANLAAGENTIFLKQA 594
Q +N P T + + R GL +Y + VPA + GENTI +
Sbjct: 448 RPQATINSYTGPAPSAPTNL--NSRGVTRGAYRGLGEVYDVSVPAGTIVTGENTITISVI 505
Query: 595 TSSSAVA----GVMYDYIRF 610
+ SS A V++D I
Sbjct: 506 SGSSGDAFLSPNVVFDCIEL 525
>sp|Q8NJK5|RGLA_ASPNG Rhamnogalacturonate lyase A (Fragment) OS=Aspergillus niger GN=rglA
PE=3 SV=1
Length = 499
Score = 34.7 bits (78), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 94/238 (39%), Gaps = 48/238 (20%)
Query: 359 QFWTTTDADGFFSISDILVGDYNLYAFVPGFIGDYRNDVVLT--ITEDSDIDMGDLVFEP 416
Q+WT T + G F+ + G Y + + G+Y VV T +T + +
Sbjct: 302 QYWTYTSSSGSFTSPAMKPGTYTMVYYQ----GEY---VVATSEVTVSAGSSTSKDISGS 354
Query: 417 IRDGPTLWEIGIPSRSAAEFYIPDPDPTYVNKLYVNHPDRFRQYGLWERYSDLYPEGDLV 476
+ G T+++IG D PT + N ++ R + R SD P L
Sbjct: 355 VETGTTIFKIGDW----------DGQPT----GFRNAENQLRMHPSDSRMSDWGP---LT 397
Query: 477 YTVGVSDYKNDWFYAQVPRKKDDNSYEATTWQIKFKLDSVDQN--ATYKLRIALATANVA 534
YTVG S + F + + + + IKF S DQ AT ++R L+ A
Sbjct: 398 YTVGSSSLTD--FPMAIFKSVN------SPVTIKFTATS-DQTGAATLRIRTTLSFAG-G 447
Query: 535 ELQVRVNDEKAEPPLFATGQIGHDNAIARHGIHGLYR----LYSMDVPAANLAAGENT 588
Q +ND + P T N +R G YR +Y + VP + GENT
Sbjct: 448 RPQATINDYEGSAPSAPT------NLDSRGVTRGAYRGYGDVYDVSVPEGTIVEGENT 499
>sp|P78710|ASD1_NEUCR Putative rhamnogalacturonase OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=asd-1 PE=2 SV=1
Length = 540
Score = 33.5 bits (75), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 68/167 (40%), Gaps = 22/167 (13%)
Query: 450 YVNHPDRFRQYGLWERYSDLYPE-------GDLVYTVGVSDYKNDWFYAQVPRKKDDNSY 502
Y P FR +++ ++P G L YTVG S ND+ A K +N
Sbjct: 380 YDGQPTGFRN---ADKFLRMHPSDSRMSSWGPLTYTVGSSSL-NDFPMAVF--KSVNNPV 433
Query: 503 EATTWQIKFKLDSVDQNATYKLRIALATANV-AELQVRVNDEKAEPPLFATGQIGHDNAI 561
IKF L S AT LRIA + A QV VN A P +I +
Sbjct: 434 T-----IKFNLGSAPSQAT-TLRIATTLSFAGARPQVVVNGWSAPAPAAPA-KI-DSRGV 485
Query: 562 ARHGIHGLYRLYSMDVPAANLAAGENTIFLKQATSSSAVAGVMYDYI 608
R G +Y + VPA L +G NTI + + SS + ++I
Sbjct: 486 TRGAYRGYGEVYDVAVPAGKLISGTNTITISALSGSSGATFLSPNFI 532
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.136 0.422
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 257,410,673
Number of Sequences: 539616
Number of extensions: 11966158
Number of successful extensions: 22181
Number of sequences better than 100.0: 26
Number of HSP's better than 100.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 22137
Number of HSP's gapped (non-prelim): 31
length of query: 625
length of database: 191,569,459
effective HSP length: 124
effective length of query: 501
effective length of database: 124,657,075
effective search space: 62453194575
effective search space used: 62453194575
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)