Query 006927
Match_columns 625
No_of_seqs 183 out of 292
Neff 5.7
Searched_HMMs 29240
Date Mon Mar 25 12:38:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006927.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006927hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1nkg_A Rhamnogalacturonase B; 100.0 4E-124 1E-128 1031.3 52.4 485 6-612 2-508 (508)
2 2nsm_A Carboxypeptidase N cata 97.8 4.4E-05 1.5E-09 83.1 9.5 95 314-435 320-415 (439)
3 1h8l_A Carboxypeptidase GP180 97.6 0.00014 4.9E-09 77.5 10.1 79 314-415 300-378 (380)
4 3mn8_A LP15968P; catalytic dom 97.5 0.00012 4E-09 79.9 7.8 90 315-428 337-428 (435)
5 1uwy_A Carboxypeptidase M; met 97.5 0.00012 4.2E-09 79.4 6.6 92 314-429 295-390 (426)
6 4aw7_A GH86A beta-porphyranase 96.2 0.014 4.8E-07 65.5 9.9 82 509-597 491-575 (591)
7 1xpn_A Hypothetical protein PA 96.1 0.02 6.9E-07 54.7 8.9 94 313-409 42-166 (170)
8 3qec_A Putative carbohydrate b 96.0 0.043 1.5E-06 51.5 11.0 95 312-409 21-146 (150)
9 2w87_A Esterase D, XYL-CBM35; 96.0 0.042 1.4E-06 50.4 10.4 90 509-614 41-132 (139)
10 2wz8_A Cellulosome protein doc 95.6 0.045 1.5E-06 51.4 9.4 87 509-612 49-148 (156)
11 2w3j_A Carbohydrate binding mo 95.3 0.095 3.2E-06 48.4 10.1 88 509-614 41-130 (145)
12 2w47_A Lipolytic enzyme, G-D-S 95.0 0.11 3.8E-06 47.5 9.7 88 509-614 42-132 (144)
13 2vzp_A Aocbm35, EXO-beta-D-glu 93.5 0.38 1.3E-05 42.8 9.7 85 509-610 41-127 (127)
14 2bgo_A Endo-B1,4-mannanase 5C; 93.2 0.4 1.4E-05 44.4 9.4 86 508-614 37-123 (140)
15 3kcp_A Cellulosomal-scaffoldin 92.8 0.15 5E-06 53.2 6.5 64 313-390 156-223 (321)
16 2xsu_A Catechol 1,2 dioxygenas 88.7 0.83 2.8E-05 47.6 7.5 63 313-381 135-202 (312)
17 2azq_A Catechol 1,2-dioxygenas 87.5 0.96 3.3E-05 47.1 7.1 64 312-381 130-198 (311)
18 2boy_A 3-chlorocatechol 1,2-di 87.4 0.63 2.2E-05 47.1 5.5 65 312-382 100-169 (254)
19 1uxz_A Cellulase B; carbohydra 87.1 2.2 7.7E-05 38.2 8.6 77 519-612 52-129 (131)
20 2y8k_A Arabinoxylanase, carboh 84.0 5.1 0.00017 43.7 11.1 87 509-614 398-484 (491)
21 3th1_A Chlorocatechol 1,2-diox 81.0 1.9 6.5E-05 43.8 5.7 64 313-382 98-166 (260)
22 2cdp_A Beta-agarase 1; carbohy 80.8 6.6 0.00023 36.5 9.1 82 518-611 77-159 (160)
23 1dmh_A 1,2-CTD, catechol 1,2-d 80.5 1.5 5.1E-05 45.7 4.9 63 314-382 133-202 (311)
24 3t63_M 3,4-PCD, protocatechuat 80.4 2.4 8.4E-05 42.4 6.3 67 310-382 73-149 (238)
25 2bum_B Protocatechuate 3,4-dio 79.8 3.4 0.00012 41.5 7.1 65 312-382 76-150 (241)
26 1tmx_A Hydroxyquinol 1,2-dioxy 79.5 2.5 8.6E-05 43.6 6.2 65 312-382 131-199 (293)
27 2bum_A Protocatechuate 3,4-dio 78.8 2 6.9E-05 42.2 5.0 64 312-381 50-124 (209)
28 1ti6_B Pyrogallol hydroxytrans 77.5 2.3 7.7E-05 43.3 5.1 48 362-414 227-274 (274)
29 2h4e_A Transthyretin; amyloid, 77.1 1.8 6.2E-05 39.4 3.8 68 313-394 8-79 (127)
30 3n9t_A PNPC; phospholipid bind 77.0 3.9 0.00013 42.2 6.7 65 312-382 127-196 (290)
31 3hhy_A 1,2-CTD, catechol 1,2-d 76.1 2.9 0.0001 42.8 5.4 63 314-382 131-198 (280)
32 3t63_A 3,4-PCD, protocatechuat 75.7 2.4 8.3E-05 41.4 4.5 65 312-382 46-116 (200)
33 1w9s_A BH0236 protein, BHCBM6; 74.4 22 0.00076 31.9 10.5 81 520-612 59-140 (142)
34 3o5u_A Chlorocatechol 1,2-diox 72.2 4.1 0.00014 41.3 5.3 63 313-381 102-170 (257)
35 3irp_X URO-adherence factor A; 72.1 6.3 0.00022 42.7 7.1 65 313-387 304-372 (429)
36 2v4v_A GH59 galactosidase; hyd 71.9 19 0.00066 31.8 9.3 79 520-611 49-128 (129)
37 2g2n_A Transthyretin-like prot 71.5 5 0.00017 35.8 5.1 67 313-394 2-72 (114)
38 1uxx_X Xylanase U; carbohydrat 68.9 30 0.001 30.8 9.9 77 520-613 51-129 (133)
39 1oo2_A Transthyretin; retinol- 67.5 3.4 0.00012 37.1 3.2 65 316-394 3-71 (119)
40 4ank_A Transthyretin; hormone 66.0 4.9 0.00017 37.4 4.0 67 314-394 29-99 (147)
41 1f86_A Transthyretin Thr119Met 63.8 5.5 0.00019 35.6 3.8 55 331-394 12-70 (115)
42 1tg7_A Beta-galactosidase; TIM 62.8 4.3 0.00015 48.4 3.7 71 507-595 855-930 (971)
43 3qva_A Transthyretin-like prot 62.5 14 0.00046 33.1 6.1 63 313-394 8-73 (116)
44 3kpt_A Collagen adhesion prote 60.6 9.2 0.00031 40.1 5.5 47 331-385 18-64 (355)
45 4hg6_B Cellulose synthase subu 57.0 14 0.00046 42.4 6.3 77 506-594 319-402 (707)
46 3oba_A Beta-galactosidase; TIM 56.9 12 0.0004 45.0 6.1 42 4-45 745-786 (1032)
47 3e8v_A Possible transglutamina 55.0 54 0.0018 27.5 8.1 52 330-392 10-65 (82)
48 2ww8_A RRGA, cell WALL surface 54.5 25 0.00084 41.6 8.2 80 314-408 47-128 (893)
49 4hg6_B Cellulose synthase subu 54.1 9.3 0.00032 43.8 4.4 74 506-596 62-140 (707)
50 1uy4_A Endo-1,4-beta-xylanase 54.1 59 0.002 29.4 9.2 76 520-612 68-143 (145)
51 1od3_A Putative xylanase; hydr 52.6 65 0.0022 30.0 9.4 76 520-612 90-165 (168)
52 3uaf_A TTR-52; beta barrel/san 50.9 18 0.00062 32.2 4.9 47 313-374 3-56 (117)
53 2x5p_A FBA2, fibronectin bindi 49.6 24 0.00083 31.5 5.6 44 331-385 38-81 (121)
54 3iwv_A 5-hydroxyisourate hydro 49.5 7.6 0.00026 35.8 2.3 68 313-394 24-96 (138)
55 1yua_A Topoisomerase I; gene-r 48.9 8.8 0.0003 34.1 2.4 18 112-129 23-40 (122)
56 3fn9_A Putative beta-galactosi 48.8 14 0.00049 42.2 4.9 70 505-596 62-132 (692)
57 2h0e_A Transthyretin-like prot 48.7 9 0.00031 34.5 2.6 63 315-395 9-76 (121)
58 2vzs_A CSXA, EXO-beta-D-glucos 48.7 3.7 0.00013 49.2 0.0 85 508-610 945-1032(1032)
59 2pz4_A Protein GBS052; SPAB, G 47.9 15 0.0005 36.2 4.2 26 360-385 70-95 (239)
60 3d3a_A Beta-galactosidase; pro 41.6 32 0.0011 38.8 6.3 68 504-596 508-575 (612)
61 3cmg_A Putative beta-galactosi 41.3 24 0.00082 39.9 5.2 69 505-595 51-120 (667)
62 3c7f_A Xylanase D, endo-1,4-be 40.9 1.1E+02 0.0039 32.8 10.3 80 520-611 406-485 (487)
63 3lpf_A Beta-glucuronidase; alp 40.0 30 0.001 38.8 5.7 67 507-595 71-138 (605)
64 4fxt_A Uncharacterized protein 37.5 1.2E+02 0.0041 29.4 8.8 64 314-388 7-70 (202)
65 1yq2_A Beta-galactosidase; gly 37.4 28 0.00096 41.7 5.2 68 506-595 121-191 (1024)
66 3bga_A Beta-galactosidase; NYS 36.7 29 0.00099 41.5 5.1 68 506-595 129-196 (1010)
67 3gm8_A Glycoside hydrolase fam 34.6 37 0.0012 39.6 5.4 68 507-596 70-137 (801)
68 2pz4_A Protein GBS052; SPAB, G 34.4 14 0.00049 36.3 1.7 45 363-409 177-224 (239)
69 1jz7_A Lactase, beta-galactosi 34.1 35 0.0012 40.9 5.2 38 8-45 740-777 (1023)
70 3v9f_A Two-component system se 34.0 42 0.0014 37.8 5.7 26 361-386 731-756 (781)
71 2je8_A Beta-mannosidase; glyco 33.8 33 0.0011 40.1 4.9 66 507-594 68-134 (848)
72 3hn5_A Putative exported prote 33.1 1.2E+02 0.0043 29.7 8.1 62 314-385 10-71 (215)
73 3lvt_A Glycosyl hydrolase, fam 32.6 2.9E+02 0.0099 32.4 12.6 124 14-152 527-681 (899)
74 3og2_A Beta-galactosidase; TIM 31.4 47 0.0016 39.6 5.6 70 507-593 887-960 (1003)
75 1jz7_A Lactase, beta-galactosi 30.8 30 0.001 41.4 4.0 69 505-595 121-190 (1023)
76 3phz_A Ricin B-related lectin; 30.6 96 0.0033 31.7 7.1 77 333-436 77-156 (286)
77 1cwv_A Invasin; integrin-bindi 30.3 2.4E+02 0.0081 30.7 10.7 75 315-406 28-104 (492)
78 4a2l_A BT_4663, two-component 30.2 39 0.0013 38.2 4.6 26 361-386 737-762 (795)
79 3kpt_A Collagen adhesion prote 29.4 47 0.0016 34.7 4.7 65 317-385 249-313 (355)
80 3ott_A Two-component system se 28.9 46 0.0016 37.3 4.9 27 361-387 702-729 (758)
81 3isy_A Bsupi, intracellular pr 28.9 54 0.0018 29.3 4.3 15 374-388 89-103 (120)
82 3oba_A Beta-galactosidase; TIM 26.8 33 0.0011 41.1 3.3 69 505-595 114-183 (1032)
83 3bs6_A Inner membrane protein 25.5 46 0.0016 33.3 3.7 29 12-40 3-31 (280)
84 4e8d_A Glycosyl hydrolase, fam 25.0 23 0.00079 39.9 1.4 64 504-592 506-569 (595)
85 1b4r_A Protein (PKD1_human); P 24.6 67 0.0023 26.5 3.9 29 375-403 52-80 (80)
86 3blc_A Inner membrane protein 24.0 50 0.0017 34.0 3.7 31 10-40 32-62 (330)
87 3bwu_D FIMD, outer membrane us 23.5 70 0.0024 28.0 4.1 15 374-388 27-41 (125)
88 3qht_C Monobody YSMB-1; fibron 22.9 67 0.0023 25.9 3.6 37 366-402 56-94 (97)
89 2p9r_A Alpha-2-M, alpha-2-macr 22.9 3.2E+02 0.011 22.5 9.4 67 306-387 11-85 (102)
90 1r6v_A Subtilisin-like serine 22.1 1.6E+02 0.0055 33.5 7.7 29 357-385 475-503 (671)
91 3t04_D Monobody 7C12; engineer 21.8 58 0.002 26.8 3.1 36 366-402 62-100 (103)
92 3b83_A Ten-D3; beta sheet, com 20.9 86 0.003 25.5 3.9 22 366-387 53-75 (100)
93 2h41_A Fibronectin; beta sandw 20.4 1.7E+02 0.0057 24.4 5.7 22 365-386 56-78 (95)
94 3q1n_A Galactose mutarotase re 20.4 1.1E+02 0.0037 30.8 5.3 32 14-45 2-35 (294)
95 2xtl_A Cell WALL surface ancho 20.1 37 0.0013 36.9 1.8 45 362-407 378-424 (452)
No 1
>1nkg_A Rhamnogalacturonase B; polysaccharide lyase, carbohydrate active enzyme, pectin, LY; 1.50A {Aspergillus aculeatus} SCOP: b.3.1.2 b.18.1.25 b.30.5.10 PDB: 2xhn_A* 3njv_A* 3njx_A
Probab=100.00 E-value=3.6e-124 Score=1031.25 Aligned_cols=485 Identities=20% Similarity=0.288 Sum_probs=417.3
Q ss_pred eEEEEeCcEEEEECC---eEEEEEeCCCeeEEEEEEcCeecccccccCCCceeeEEEeecCCCCCCCCCceeeecCceEE
Q 006927 6 VQLQIQDHHVVMDNG---LLQVTISKPDGHVTRIQGYGIDNMLEVRNKETNRGYWDLVWSETGSTGTTGTDELIKGSDFR 82 (625)
Q Consensus 6 v~l~~~g~~vvldNg---~l~vtv~k~~G~vtsl~y~G~enll~~~~~~~~~gY~d~~w~~~G~~~~~~~~~~~~gt~~~ 82 (625)
.++++++++|||||| +|+|+|+|++|+||||+|+|+|+|+ .++++|+| +++|+ ++ ++
T Consensus 2 ~g~t~~~~~~vvd~g~n~~l~~tv~k~~G~itsi~y~G~e~~~--~~~~s~~g------sg~G~----~~--------~~ 61 (508)
T 1nkg_A 2 FGITTSSSAYVIDTNAPNQLKFTVSRSSCDITSIIHYGTELQY--SSQGSHIG------SGLGS----AT--------VT 61 (508)
T ss_dssp CEEEECSSEEEEECCCTTCEEEEEETTTCCEEEEEETTEECBC--SSSCBEET------TCCSS----CE--------EE
T ss_pred ccEEecCCEEEEECCCCCEEEEEEeCCCceEEEEEECCEEccc--cCCCcccc------cCCCc----ce--------EE
Confidence 578999999999655 9999999999999999999999777 48999999 88873 23 33
Q ss_pred EEEecCCEEEEEEEEeecccccCCccccceeEEEEEeCCcceeEEEEEeeccCCCCCCCCCcceEEEEecccc---cc-c
Q 006927 83 VIVENEEQVEISFTRMWDISLQDKLAPLNIDKRYIMLGNTSGFYSYAIYEHMGEWPAFNLPQTRMVFKLRKDK---CK-E 158 (625)
Q Consensus 83 vi~~~~~~i~vs~~~~~~~s~~g~~~~l~l~~~~v~r~g~sgiY~y~i~~~~~~~p~~~lge~R~v~Rl~~~~---~~-~ 158 (625)
++ +++++|+|||++ + +||||||||+|++|||||++++ .+++|+|+|+||||++++ .+ .
T Consensus 62 ~~-~~~~~i~vs~~~-------~-----~l~~~~v~~~g~sg~Y~y~~~~-----~~~~lge~R~v~Rl~~~~f~~~~r~ 123 (508)
T 1nkg_A 62 AT-QSGDYIKVTCVT-------D-----TLTQYMVVHNGDPIIHMATYIT-----AEPSIGELRFIARLNSDLLPNEEPF 123 (508)
T ss_dssp EE-EETTEEEEEEEC-------S-----SEEEEEEEETTCCEEEEEEEES-----SCCTTSCEEEEEEECTTTCCEEETT
T ss_pred EE-ecCCEEEEEEEe-------C-----CceEEEEEeCCCceEEEEEeec-----cCCCCCceEEEEEcChhhCCCcccc
Confidence 33 347999999997 3 8999999999999999999885 368899999999999998 11 0
Q ss_pred ccccce--eEeeCCCC-CCCCceeeeceeeccccccccEEEEEeCCCceEEEEEcCCCccccCCcceeccccccCc---c
Q 006927 159 LAFPEA--VLLVNPIE-PEFNGEVDDKYQYSCENRNLKVHGWICSDPAVGFWQITPSNEFRSGGPLKQNLTSHVGP---I 232 (625)
Q Consensus 159 l~~~ea--v~~~~~~d-~~~~G~~~sKY~~s~~~~D~~vhG~~~~g~~vG~W~I~~s~E~~sGGP~kqdL~~h~g~---~ 232 (625)
.++|+. -.-+.+.| ++++|+++||||||+++||++||||+ +++||||||+|++||++||||||||++|+|| +
T Consensus 124 ~~~p~~~~~~~v~~~d~~~l~G~~~~KY~~s~~~~D~~vhG~~--~~~vG~w~I~~s~E~~sGGP~kqdL~~h~~~~~~~ 201 (508)
T 1nkg_A 124 GDVSTTADGTAIEGSDVFLVGSETRSKFYSSERFIDDQRHCIA--GDAHRVCMILNQYESSSGGPFHRDINSNNGGSYNA 201 (508)
T ss_dssp GGGGCCTTCEEEETTTEEEETTEEEEGGGGCCBGGGCSEEEEE--CSSCEEEEECCCCTTCSSCTTCBCCCEEECSSCEE
T ss_pred CCCCccccCcEeeeccceeeCCEEccceeccccceecceEEEE--CCCeEEEEEcCCcccccCCCcchhhhccCCcccce
Confidence 112221 01112222 45689999999999999999999999 6999999999999999999999999999999 8
Q ss_pred EEEEEecccccCccceecccCCCCcc-eeeceEEEEEeCCCCCCCCCccchhHHHHHHhhhhcccCCCCCCCCC---CCC
Q 006927 233 TLAMFLSAHYGGEDLVLKLKQDEPWK-KVLGPVFFYINSFLDSDSDDPKAWLWEDAKQQTLNESESWPYSFPAS---EDF 308 (625)
Q Consensus 233 ~l~~~~s~H~~g~~~~~~~~~ge~w~-kv~GP~~~y~N~g~~~~~~~~~~~lw~Da~~~~~~E~~~WPy~f~~~---~~y 308 (625)
+||||+|+|++ +|.++ |||||||||||+|+++ . ++|||+|+++ ++|
T Consensus 202 ~~~y~~s~H~~----------t~~~~~g~~GP~~~y~n~g~~~-------~-------------~~wpysf~~s~~~~~y 251 (508)
T 1nkg_A 202 LYWYMNSGHVQ----------TESYRMGLHGPYSMYFSRSGTP-------S-------------TSIDTSFFADLDIKGY 251 (508)
T ss_dssp EEEEEECSTTC----------CSCCCCEEEEEEEEEEESSCCC-------C-------------SCCCCGGGGGTTCTTC
T ss_pred eeeeEeecccc----------cccccccccccEEEEECCCCCC-------C-------------CCCCCccccccCccCC
Confidence 99999999987 45556 9999999999999864 1 6999999998 999
Q ss_pred CCCCCceEEEEEEEEeccccccCCcccCceEEEecCCCCCCCcccccccceEEEEeCCCcceEeCcccCCeeEEEEEEcc
Q 006927 309 PKWNQRGNISGRLQVQDRYVSDDYITVDGAYVGLAPSGDAGSWQTECKGYQFWTTTDADGFFSISDILVGDYNLYAFVPG 388 (625)
Q Consensus 309 ~~~~qRGtVsG~v~~~d~~~~~~~~pa~~a~V~La~~g~~g~~q~~~~~yqywt~td~~G~F~I~nVrpGtY~L~a~~~G 388 (625)
||+++||+|+|+|+ + .|+....|++ |. +++|||||+||++|+|+|++||||+|+|+||++|
T Consensus 252 ~~~~~RGtVsG~V~--G-------~~~~~~avv~--------~~--~k~~qywt~td~~G~FtI~~V~pGtY~L~a~~~G 312 (508)
T 1nkg_A 252 VAASGRGKVAGTAS--G-------ADSSMDWVVH--------WY--NDAAQYWTYTSSSGSFTSPAMKPGTYTMVYYQGE 312 (508)
T ss_dssp CCGGGCBEEEEEEE--S-------SCTTSCEEEE--------EE--CSSCEEEEECCTTCEEECCCBCSEEEEEEEEETT
T ss_pred cCcccccEEEEEEc--C-------ccCCceEEEE--------Ec--CCCceeEEEECCCCcEEeCCcCCceEEEEEEECc
Confidence 99999999999975 4 4333333332 32 8999999999999999999999999999999988
Q ss_pred eeeeeeeeeEEEEeCCCceeccceEEeeCCCCCceEEEeccCCCccceecCCCCCccccceeccCCchhhcccchhhccc
Q 006927 389 FIGDYRNDVVLTITEDSDIDMGDLVFEPIRDGPTLWEIGIPSRSAAEFYIPDPDPTYVNKLYVNHPDRFRQYGLWERYSD 468 (625)
Q Consensus 389 ~~G~~~~~~~VtV~aG~t~~l~~l~~~~p~~g~~LweIG~pDrta~eF~~~d~~~~~~n~~~~~~~d~~r~yglW~r~~~ 468 (625)
+ ...+..|+|+||++++++ |+|+++ ++++|||||+|||+|.||+++|+ .++|| |++||+| +|
T Consensus 313 ~---~~~~~~VtV~aG~t~~l~-i~~~~~-~g~~iW~IG~pDrta~eF~~~d~------~~~~h-p~~~r~~-~W----- 374 (508)
T 1nkg_A 313 Y---AVATSSVTVSAGSTTTKN-ISGSVK-TGTTIFKIGEWDGQPTGFRNAAN------QLRMH-PSDSRMS-SW----- 374 (508)
T ss_dssp E---EEEEEEEEECTTCEEECC-EECCCC-CCSEEEEEECSSSSCTTSBTHHH------HTTSC-TTCTTSC-CC-----
T ss_pred e---EEEEeEEEEcCCCeeEee-eEEecC-CCCeeEEeeCCCCCchhhcCCCc------ccccC-cchhccc-cc-----
Confidence 8 356677999999999997 999975 89999999999999999999982 33566 6789998 87
Q ss_pred cCCCCCeEEEeeecCCCCCeeeeeecccCCCCCCcceeEEEEEEecCCCCCCcEEEEEEEecc-cCceEEEEEcCCCCCC
Q 006927 469 LYPEGDLVYTVGVSDYKNDWFYAQVPRKKDDNSYEATTWQIKFKLDSVDQNATYKLRIALATA-NVAELQVRVNDEKAEP 547 (625)
Q Consensus 469 ~~P~~dl~ytVG~S~~~~Dw~ya~~~~~~~~~~~~~~~w~I~F~L~~~~~~~~~tLriala~a-~~~~~~V~vNg~~~~~ 547 (625)
+||+||||+|++ +||||||| +.+ .++|+|+|+|+++| .+++||||+||+| +++++||+|||+..+.
T Consensus 375 ----~~l~ytVG~S~~-~Dw~ya~~-~~~------~~~w~I~F~l~~~~-~~~~tLri~la~a~a~~~~qV~VN~~~~~~ 441 (508)
T 1nkg_A 375 ----GPLTYTVGSSAL-TDFPMAVF-KSV------NNPVTIKFTATSAQ-TGAATLRIGTTLSFAGGRPQATINSYTGSA 441 (508)
T ss_dssp ----CSCEEETTTSCG-GGSBSEEE-TTT------TCCEEEEEEECGGG-CSCEEEEEEEEEEETTCEEEEEETTEECCC
T ss_pred ----CCeEEEeCcCch-hcCCeEEE-CCC------CCcEEEEEEcCccc-CCceEEEEEehhhccCCCeEEEECCcCCcC
Confidence 469999999999 79999999 332 26799999999988 5799999999998 6899999999987765
Q ss_pred CCcccccccCCCceeceeeeeeeEEEEEEeecCCeeeeecEEEEEEecCCC--CC--ceEEEEEEEEec
Q 006927 548 PLFATGQIGHDNAIARHGIHGLYRLYSMDVPAANLAAGENTIFLKQATSSS--AV--AGVMYDYIRFEG 612 (625)
Q Consensus 548 p~~~t~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G~NtI~l~~~~g~s--~~--~~vmyD~IrLe~ 612 (625)
| .++.+++||||+||++||+|++++|+||+++|++|+|+|+|+++++++ +| ++|||||||||.
T Consensus 442 ~--~~~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G~NtI~lt~~~~s~~~~fls~~vmyD~I~L~~ 508 (508)
T 1nkg_A 442 P--AAPTNLDSRGVTRGAYRGLGEVYDVSIPSGTIVAGTNTITINVISGSSGDTYLSPNFIFDCVELFQ 508 (508)
T ss_dssp C--CCCCCCCSCCGGGTCCCSCCCEEEEEECTTSSCSEEEEEEEEEECSCCCSGGGSSEEEEEEEEEEC
T ss_pred c--cccccCCCCeEEecceeeeeEEEEEEEcHHHeecCceEEEEEeccCCCCCccccccEEEEEEEecC
Confidence 4 566799999999999999999999999999999999999999999986 67 699999999984
No 2
>2nsm_A Carboxypeptidase N catalytic chain; caroxypeptidase, zinc peptidase, transthyretin-like domain, processing, peptide modification, hydrolase; HET: NAG; 2.10A {Homo sapiens}
Probab=97.81 E-value=4.4e-05 Score=83.13 Aligned_cols=95 Identities=18% Similarity=0.296 Sum_probs=61.4
Q ss_pred ceEEEEEEEEeccccccCCcccCceEEEecCCCCCCCcccccccceEEEEeCCCcceEeCcccCCeeEEEEEEcceeeee
Q 006927 314 RGNISGRLQVQDRYVSDDYITVDGAYVGLAPSGDAGSWQTECKGYQFWTTTDADGFFSISDILVGDYNLYAFVPGFIGDY 393 (625)
Q Consensus 314 RGtVsG~v~~~d~~~~~~~~pa~~a~V~La~~g~~g~~q~~~~~yqywt~td~~G~F~I~nVrpGtY~L~a~~~G~~G~~ 393 (625)
.+.|+|+|+-. .+.|..+|.|.+. +....+.||.+|.|.+ .++||+|+|++.+.|+.
T Consensus 320 ~~~i~G~V~D~------~g~pi~gA~V~v~-------------~~~~~~~Td~~G~y~~-~l~~G~Y~l~vs~~Gy~--- 376 (439)
T 2nsm_A 320 HQGIKGMVLDQ------NYNNLANAVISVS-------------GINHDVTSGDHGDYFR-LLLPGIYTVSATAPGYD--- 376 (439)
T ss_dssp SCSEEEEEECT------TSCBCTTCEEEET-------------TEEEEEECCTTSEEEE-CCCSEEEEEEEECTTEE---
T ss_pred ccceEEEEEcC------CCCCccceEEEEE-------------cccceeEECCCCeEEE-ccCCeeEEEEEEecCce---
Confidence 58899998533 3789999999984 2335689999999998 59999999999997776
Q ss_pred eeeeEEEE-eCCCceeccceEEeeCCCCCceEEEeccCCCccc
Q 006927 394 RNDVVLTI-TEDSDIDMGDLVFEPIRDGPTLWEIGIPSRSAAE 435 (625)
Q Consensus 394 ~~~~~VtV-~aG~t~~l~~l~~~~p~~g~~LweIG~pDrta~e 435 (625)
.....|+| .+++++ . ++++.+ ...+|-||.+.+.+..+
T Consensus 377 ~~~~~v~v~~~~~~~-~-~~~L~~--~~~~L~eVvV~~~~~~~ 415 (439)
T 2nsm_A 377 PETVTVTVGPAEPTL-V-NFHLKR--SIPQVSPVRRAPSRRHG 415 (439)
T ss_dssp CEEEEEEECSSSCEE-C-CEECEE--C----------------
T ss_pred eEEEEEEEecCCcce-E-eEEEcc--CCCccccEEEecCCCCC
Confidence 44456888 566654 3 688875 57899999998866543
No 3
>1h8l_A Carboxypeptidase GP180 residues 503-882; hydrolase, zinc-dependent protease; HET: NAG BMA NDG GEM; 2.6A {Lophonetta specularioides} SCOP: b.3.2.1 c.56.5.1 PDB: 1qmu_A*
Probab=97.64 E-value=0.00014 Score=77.51 Aligned_cols=79 Identities=16% Similarity=0.184 Sum_probs=62.4
Q ss_pred ceEEEEEEEEeccccccCCcccCceEEEecCCCCCCCcccccccceEEEEeCCCcceEeCcccCCeeEEEEEEcceeeee
Q 006927 314 RGNISGRLQVQDRYVSDDYITVDGAYVGLAPSGDAGSWQTECKGYQFWTTTDADGFFSISDILVGDYNLYAFVPGFIGDY 393 (625)
Q Consensus 314 RGtVsG~v~~~d~~~~~~~~pa~~a~V~La~~g~~g~~q~~~~~yqywt~td~~G~F~I~nVrpGtY~L~a~~~G~~G~~ 393 (625)
.++|+|+|+-. ..+.|..+|.|.+. +....+.||++|.|.+ .++||+|+|++...|+.
T Consensus 300 ~~~i~G~V~D~-----~~g~pi~~A~V~v~-------------~~~~~~~Td~~G~y~~-~l~~G~Y~l~vs~~Gy~--- 357 (380)
T 1h8l_A 300 HRGIWGFVLDA-----TDGRGILNATISVA-------------DINHPVTTYKDGDYWR-LLVQGTYKVTASARGYD--- 357 (380)
T ss_dssp GCEEEEEEEET-----TTCSBCTTCEEEET-------------TEEEEEECCTTSEEEE-CCCSEEEEEEEECTTBC---
T ss_pred cccceEEEEeC-----CCCCccCceEEEEe-------------cCcceeEECCCEEEEE-ecCCCcEEEEEEEcCcc---
Confidence 58999998643 13689999999984 2235688999999999 59999999999998876
Q ss_pred eeeeEEEEeCCCceeccceEEe
Q 006927 394 RNDVVLTITEDSDIDMGDLVFE 415 (625)
Q Consensus 394 ~~~~~VtV~aG~t~~l~~l~~~ 415 (625)
.....|+|.+++++.+ ++.++
T Consensus 358 ~~~~~v~v~~~~~~~~-~~~L~ 378 (380)
T 1h8l_A 358 PVTKTVEVDSKGGVQV-NFTLS 378 (380)
T ss_dssp CEEEEEEECSSCEEEC-CEEEC
T ss_pred ceEEEEEEcCCCeEEE-EEEec
Confidence 4445699999987766 46665
No 4
>3mn8_A LP15968P; catalytic domain of alpha/beta-hydrolase fold, C-terminal, A transthyretin-like domain, hydrolase; HET: NAG GEM; 2.70A {Drosophila melanogaster}
Probab=97.54 E-value=0.00012 Score=79.87 Aligned_cols=90 Identities=19% Similarity=0.176 Sum_probs=61.4
Q ss_pred eEEEEEEEEeccccccCCcccCceEEEecCCCCCCCcccccccceEEEEeCCCcceEeCcccCCeeEEEEEEcceeeeee
Q 006927 315 GNISGRLQVQDRYVSDDYITVDGAYVGLAPSGDAGSWQTECKGYQFWTTTDADGFFSISDILVGDYNLYAFVPGFIGDYR 394 (625)
Q Consensus 315 GtVsG~v~~~d~~~~~~~~pa~~a~V~La~~g~~g~~q~~~~~yqywt~td~~G~F~I~nVrpGtY~L~a~~~G~~G~~~ 394 (625)
..|+|+|+ | ..+.|..+|.|.+.... ...+.||++|.|.+. ++||+|+|++.+.|+.. .
T Consensus 337 ~gv~G~V~--D----~~G~pi~gA~V~v~g~~------------~~~~~Td~~G~y~~~-l~pG~Y~l~vs~~Gy~~--~ 395 (435)
T 3mn8_A 337 IGIKGLVT--D----ASGFPIADANVYVAGLE------------EKPMRTSKRGEYWRL-LTPGLYSVHASAFGYQT--S 395 (435)
T ss_dssp SSEEEEEE--C----SSSCBCTTCEEEETTCT------------TSCEECCTTCEEEEC-CCSEEEEEEEEBTTBCC--C
T ss_pred ceeEEEEE--C----CCCCccCceEEEEeccc------------ccceEeCCCCeEEEe-cCCCcEEEEEEEccccc--c
Confidence 45999985 4 23799999999995320 135689999999885 99999999999988732 4
Q ss_pred eeeEEEEeCCCc--eeccceEEeeCCCCCceEEEec
Q 006927 395 NDVVLTITEDSD--IDMGDLVFEPIRDGPTLWEIGI 428 (625)
Q Consensus 395 ~~~~VtV~aG~t--~~l~~l~~~~p~~g~~LweIG~ 428 (625)
....|+|.+++. +.+ ++++++ ...+|-||-+
T Consensus 396 ~~~~v~v~~~~~~~~~~-~~~L~~--~~~~L~~v~~ 428 (435)
T 3mn8_A 396 APQQVRVTNDNQEALRL-DFKLAP--VETNFDGISS 428 (435)
T ss_dssp CCEEEEECCCSSSCEEC-CEECCB--C---------
T ss_pred eEEEEEEecCCcceeEE-EEEEee--cCCCCCeeEe
Confidence 455699998873 356 588885 6778888865
No 5
>1uwy_A Carboxypeptidase M; metallopeptidase, GPI-anchor, metalloprotease, zinc, lipoprotein, hydrolase, structural proteomics in europe, spine; HET: NAG; 3.0A {Homo sapiens} SCOP: b.3.2.1 c.56.5.1
Probab=97.46 E-value=0.00012 Score=79.39 Aligned_cols=92 Identities=17% Similarity=0.140 Sum_probs=62.0
Q ss_pred ceEEEEEEEEeccccccCCcccCceEEEecCCCCCCCcccccccceEEEEeCCCcceEeCcccCCeeEEEEEEcceeeee
Q 006927 314 RGNISGRLQVQDRYVSDDYITVDGAYVGLAPSGDAGSWQTECKGYQFWTTTDADGFFSISDILVGDYNLYAFVPGFIGDY 393 (625)
Q Consensus 314 RGtVsG~v~~~d~~~~~~~~pa~~a~V~La~~g~~g~~q~~~~~yqywt~td~~G~F~I~nVrpGtY~L~a~~~G~~G~~ 393 (625)
.++|+|+|+ | ..+.|..+|.|.+.... .+ .-+.||.+|.|.+ .+.||+|+|++.+.|+.
T Consensus 295 ~~~I~G~V~--D----~~g~pi~gA~V~v~g~~---------~~--~~~~Td~~G~y~~-~l~~G~Y~l~vs~~Gy~--- 353 (426)
T 1uwy_A 295 HLGVKGQVF--D----QNGNPLPNVIVEVQDRK---------HI--CPYRTNKYGEYYL-LLLPGSYIINVTVPGHD--- 353 (426)
T ss_dssp GCSEEEEEE--C----TTSCBCCSCEEEETTCC---------CS--SCCBCCTTCEEEE-CCCSEEEEEEEECSSSC---
T ss_pred cceeEEEEE--C----CCCCccCceEEEEEecc---------cc--ceeEeCCCCEEEe-ccCCeeEEEEEEEcCcc---
Confidence 578999985 4 23789999999986432 11 1257999999999 49999999999997765
Q ss_pred eeeeEEEEeCCC----ceeccceEEeeCCCCCceEEEecc
Q 006927 394 RNDVVLTITEDS----DIDMGDLVFEPIRDGPTLWEIGIP 429 (625)
Q Consensus 394 ~~~~~VtV~aG~----t~~l~~l~~~~p~~g~~LweIG~p 429 (625)
..+..|+|.+++ ++.+ ++++.+ ...+|-||.+-
T Consensus 354 ~~~~~v~v~~~~~~~~~~~~-~~~L~~--~~~~l~evv~~ 390 (426)
T 1uwy_A 354 PHITKVIIPEKSQNFSALKK-DILLPF--QGQLDSIPVSN 390 (426)
T ss_dssp CEEEEEEECSSCSSSSCEEC-CEECSS--CC---------
T ss_pred cEEEEEEEeCCCccccceEE-EEEEec--CCccccceeec
Confidence 455568898876 5555 577773 67788888764
No 6
>4aw7_A GH86A beta-porphyranase; hydrolase, porphyran-hexa-oligosaccharide, complex; HET: GLA GAL L6S AAL; 1.33A {Bacteroides plebeius}
Probab=96.20 E-value=0.014 Score=65.47 Aligned_cols=82 Identities=13% Similarity=0.263 Sum_probs=57.8
Q ss_pred EEEEecCCCC-CCcEEEEEEEecccC--ceEEEEEcCCCCCCCCcccccccCCCceeceeeeeeeEEEEEEeecCCeeee
Q 006927 509 IKFKLDSVDQ-NATYKLRIALATANV--AELQVRVNDEKAEPPLFATGQIGHDNAIARHGIHGLYRLYSMDVPAANLAAG 585 (625)
Q Consensus 509 I~F~L~~~~~-~~~~tLriala~a~~--~~~~V~vNg~~~~~p~~~t~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G 585 (625)
+.|++..++. .+.++|||++....+ ..+.|.|||..+.+|.=-. +.+.. -|.- +.-..+|+||+++|+++
T Consensus 491 ~~F~i~~v~tg~g~A~LRvg~gR~~g~s~~p~V~vNG~~v~vP~~w~---g~dq~-~r~~---fFg~ieipVp~~lL~~~ 563 (591)
T 4aw7_A 491 LSFPFTGIESGSGRASLRMSIGRPVSASKKPVVKINGTAVSVPDNWK---GYGQS-NRNI---FFGMIEVPFDIQLLKNG 563 (591)
T ss_dssp EEEEEEEECCCSEEEEEEEEEEEETTSCSCCEEEETTEEECCCSCCS---SCCCT-TSSE---EEEEEEEEECGGGCCSE
T ss_pred eEEEEecccCCCceEEEEEEcCcCCCcCCCCEEEECCEEeccCcccc---ccccc-Chhh---ceEEEEecCCHHHHhcC
Confidence 3344443332 368999999998743 5689999999887664222 22221 2443 45689999999999989
Q ss_pred ecEEEEEEecCC
Q 006927 586 ENTIFLKQATSS 597 (625)
Q Consensus 586 ~NtI~l~~~~g~ 597 (625)
+|+|.++.+.+.
T Consensus 564 ~NtI~VtFPD~G 575 (591)
T 4aw7_A 564 DNNVDITFSDGG 575 (591)
T ss_dssp EEEEEEECSSCC
T ss_pred CCeEEEEecCCC
Confidence 999999998854
No 7
>1xpn_A Hypothetical protein PA1324; B-barrel, structural genomics, northeast structural genomics consortium, NESG, protein structure initiative; NMR {Pseudomonas aeruginosa} SCOP: b.3.7.1
Probab=96.05 E-value=0.02 Score=54.73 Aligned_cols=94 Identities=22% Similarity=0.281 Sum_probs=60.8
Q ss_pred CceEEEEEEEEeccccccCCcccCceEEEecCCCC-------------CCC---------cccccccceEEEEeCCCcce
Q 006927 313 QRGNISGRLQVQDRYVSDDYITVDGAYVGLAPSGD-------------AGS---------WQTECKGYQFWTTTDADGFF 370 (625)
Q Consensus 313 qRGtVsG~v~~~d~~~~~~~~pa~~a~V~La~~g~-------------~g~---------~q~~~~~yqywt~td~~G~F 370 (625)
+.++|+|++.+... ...-.+..+..|.|.+... .|- |.-+...|.--|.+|++|+|
T Consensus 42 G~~tI~G~a~~~~~--~G~~~~~~G~~V~L~P~T~Ys~er~~~yG~~~~g~~p~~~~~~~~dp~~~~y~r~t~~D~~G~F 119 (170)
T 1xpn_A 42 GGGVINGDLYLTSA--SGAIQKGTNTKVALEPATSYMKAYYAKFGNLDAAKRDPDVQPPVLDPRRATYVREATTDQNGRF 119 (170)
T ss_dssp CCCCEEEEECEECT--TSCEECCTTEEEEEEECCTHHHHHHHHSSSEEGGGCCSSSCCCCCCTTHHHHCEEEEECSSCEE
T ss_pred CCceEEEEEEEEcC--CCCEEecCCCEEEEEeCCHHHHHHHHHhCccccccccccccccccCchhhcceeEEEecCCCcE
Confidence 56899999988752 1223455666777764210 010 11223456777999999999
Q ss_pred EeCcccCCeeEEEEEE---c---c---eeeeeeeeeEEEEeCCCceec
Q 006927 371 SISDILVGDYNLYAFV---P---G---FIGDYRNDVVLTITEDSDIDM 409 (625)
Q Consensus 371 ~I~nVrpGtY~L~a~~---~---G---~~G~~~~~~~VtV~aG~t~~l 409 (625)
++.+|+||+|=|.+.+ . + -.|.... ..|+|..|++.++
T Consensus 120 ~F~~Lp~G~Yyl~a~v~w~~~~~~~~~~qgg~l~-k~Vtv~~Ge~~~v 166 (170)
T 1xpn_A 120 DFDHIPNGTYYISSELTWSAQSDGKTITEGGTVT-KLVTVSGSQPQKV 166 (170)
T ss_dssp EECSCCSEEEEEEEEEEEEEEETTEEEEEEEEEE-EEEEECCSSCEEE
T ss_pred EecCCCCccEEEEEEEeccCccccccccccceEE-EEEEeCCCcEEEE
Confidence 9999999999999852 1 1 1232333 3489998887654
No 8
>3qec_A Putative carbohydrate binding protein; suramin binding, heparin binding, possible carbohydrate TRAN biofilm formation; HET: PGE; 2.61A {Pseudomonas aeruginosa}
Probab=96.04 E-value=0.043 Score=51.51 Aligned_cols=95 Identities=21% Similarity=0.252 Sum_probs=63.7
Q ss_pred CCceEEEEEEEEeccccccCCcccCceEEEecCCCC-------------CCC--------cc-cccccceEEEEeCCCcc
Q 006927 312 NQRGNISGRLQVQDRYVSDDYITVDGAYVGLAPSGD-------------AGS--------WQ-TECKGYQFWTTTDADGF 369 (625)
Q Consensus 312 ~qRGtVsG~v~~~d~~~~~~~~pa~~a~V~La~~g~-------------~g~--------~q-~~~~~yqywt~td~~G~ 369 (625)
.+.++|.|++.+.... +......+..|.|-+... -.. +. .+-..|..-|.+|++|+
T Consensus 21 ~G~~tI~G~a~~r~~~--G~~~~c~g~~V~L~P~T~Y~~e~~~~~g~~~~~~r~~~~~~~~~d~~~~~y~r~t~cD~~G~ 98 (150)
T 3qec_A 21 VGEGVINGDLYLTSAS--GAIQKGTNTKVALEPATSYMKAYYAKFGNLDAAKRDPDVQPPVLDPRRATYVREATTDQNGR 98 (150)
T ss_dssp CCCEEEEEEEEEECTT--SCEEECCSCEEEEEECCHHHHHHHHHHTTCBSTTCCTTCCCCCCCTTSGGGCEEEECCTTSE
T ss_pred CCcceEEEEEEEECCC--CCEecCCCCEEEEEeCCHHHHHHHHHhcCcccccccCCCCCCCCChhHhcceeEEEeCCCCc
Confidence 3679999999887621 222356677788863210 000 11 23567888899999999
Q ss_pred eEeCcccCCeeEEEEEEc------c---eeeeeeeeeEEEEeCCCceec
Q 006927 370 FSISDILVGDYNLYAFVP------G---FIGDYRNDVVLTITEDSDIDM 409 (625)
Q Consensus 370 F~I~nVrpGtY~L~a~~~------G---~~G~~~~~~~VtV~aG~t~~l 409 (625)
|++.+|+||+|-|.+.+. + ..|..... .|+|+.|++..+
T Consensus 99 F~F~~Lp~G~Yyl~a~v~w~~~~~~~~~~qgg~lmk-~V~v~ggq~~~v 146 (150)
T 3qec_A 99 FDFDHIPNGTYYISSELTWSAQSDGKTITEGGTVTK-LVTVSGSQPQKV 146 (150)
T ss_dssp EEEEEECSEEEEEEEEEEEEEESSSSEEEEEEEEEE-EEEESSSCCCCE
T ss_pred EEECCCCCccEEEEEEEEeccCCCCCcccccceEEE-EEEEcCCcEEEE
Confidence 999999999999988742 1 12334444 399999988654
No 9
>2w87_A Esterase D, XYL-CBM35; plant cell WALL degradation, carbohydrate protein binding, xylan, CMB35, glucuronic acid, hydrolase; HET: GCU; 1.60A {Cellvibrio japonicus} PDB: 2w46_A
Probab=95.95 E-value=0.042 Score=50.36 Aligned_cols=90 Identities=17% Similarity=0.201 Sum_probs=54.5
Q ss_pred EEEEecCCCCCCcEEEEEEEeccc--CceEEEEEcCCCCCCCCcccccccCCCceeceeeeeeeEEEEEEeecCCeeeee
Q 006927 509 IKFKLDSVDQNATYKLRIALATAN--VAELQVRVNDEKAEPPLFATGQIGHDNAIARHGIHGLYRLYSMDVPAANLAAGE 586 (625)
Q Consensus 509 I~F~L~~~~~~~~~tLriala~a~--~~~~~V~vNg~~~~~p~~~t~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G~ 586 (625)
|.|.+.. +..+.|+|+|-.|... ...+.|.|||..... .+..++... ++ -.|....+.|+ |++|.
T Consensus 41 v~~~V~v-~~aG~Y~l~~ryang~~~~r~~~l~VNG~~~g~---~~v~~p~Tg-----~W-~~w~t~~~~v~---L~aG~ 107 (139)
T 2w87_A 41 VVWAIDA-TSSGRRTLTIRYANGGTANRNGSLVINGGSNGN---YTVSLPTTG-----AW-TTWQTATIDVD---LVQGN 107 (139)
T ss_dssp EEEEEEE-SSCEEEEEEEEEECCSSSCCCEEEEETTTTTCE---EEECCCCCS-----ST-TCCEEEEEEEE---ECSEE
T ss_pred EEEEEEC-CCCcEEEEEEEEECCCCCCceEEEEECCEEcce---eEEEecCCC-----CC-CccEEEEEEEE---ECCCc
Confidence 4455432 3458899999998753 467999999975410 001111111 00 02334445555 89999
Q ss_pred cEEEEEEecCCCCCceEEEEEEEEecCC
Q 006927 587 NTIFLKQATSSSAVAGVMYDYIRFEGPP 614 (625)
Q Consensus 587 NtI~l~~~~g~s~~~~vmyD~IrLe~p~ 614 (625)
|+|.|....+. -++-.|+|+|+.+.
T Consensus 108 ntI~l~~~~~~---g~~niD~i~v~~~~ 132 (139)
T 2w87_A 108 NIVQLSATTAE---GLPNIDSLSVVGGT 132 (139)
T ss_dssp EEEEEEESSTT---CCCEEEEEEEESSS
T ss_pred eEEEEEEcCCC---CCEEEEEEEEecCC
Confidence 99999965321 14778999998643
No 10
>2wz8_A Cellulosome protein dockerin type I; sugar binding protein; 1.50A {Clostridium thermocellum}
Probab=95.64 E-value=0.045 Score=51.35 Aligned_cols=87 Identities=25% Similarity=0.292 Sum_probs=53.4
Q ss_pred EEEE-ecCCCCCCcEEEEEEEeccc------------CceEEEEEcCCCCCCCCcccccccCCCceeceeeeeeeEEEEE
Q 006927 509 IKFK-LDSVDQNATYKLRIALATAN------------VAELQVRVNDEKAEPPLFATGQIGHDNAIARHGIHGLYRLYSM 575 (625)
Q Consensus 509 I~F~-L~~~~~~~~~tLriala~a~------------~~~~~V~vNg~~~~~p~~~t~~~~~~~~i~R~~~~G~~~~~~~ 575 (625)
|.|. +.. +..|.|+|+|-.+... ...+.|.|||.... ...++.... +. .+....+
T Consensus 49 vtf~~V~~-~~aG~Y~l~irYang~~~~~~~y~~~~~~r~~~v~VNG~~~~-----~v~fp~Tg~-----W~-~~~~~tv 116 (156)
T 2wz8_A 49 LQFNNVYV-PQAGTYRMVVQFANAEVFGQHSYNNNVVDRYCSISVNGGPEK-----GHYFFNTRG-----WN-TYRTDII 116 (156)
T ss_dssp EEEEEEEE-SSCEEEEEEEEEECCCBC-------CBCCEEEEEEETTCCCE-----EEEECCCSS-----TT-CCEEEEE
T ss_pred EEEEEEec-CCCcEEEEEEEEECCCcccccccCCccCcceEEEEECCceee-----EEEeCCCCC-----CC-cceEEEE
Confidence 3444 432 3458999999988653 35699999997531 112222111 11 3455566
Q ss_pred EeecCCeeeeecEEEEEEecCCCCCceEEEEEEEEec
Q 006927 576 DVPAANLAAGENTIFLKQATSSSAVAGVMYDYIRFEG 612 (625)
Q Consensus 576 ~ipa~~L~~G~NtI~l~~~~g~s~~~~vmyD~IrLe~ 612 (625)
.|+ |++|.|+|+|.-.. ...| +.=.|+|.|..
T Consensus 117 ~V~---L~aG~NtI~~~~~~-~~~~-~pdiD~i~v~~ 148 (156)
T 2wz8_A 117 DVY---LNAGNNTIRFYNGT-SGSY-APNIDKIAIAA 148 (156)
T ss_dssp EEE---ECSEEEEEEEECCS-TTCB-CCEEEEEEEEC
T ss_pred EEE---ECCCceEEEEEecC-CCCC-CcEEEEEEEec
Confidence 666 99999999998541 1223 45678888864
No 11
>2w3j_A Carbohydrate binding module; sugar-binding protein, family 35, uronic acid sugars; 1.70A {Uncultured bacterium}
Probab=95.25 E-value=0.095 Score=48.38 Aligned_cols=88 Identities=25% Similarity=0.356 Sum_probs=53.7
Q ss_pred EEEEecCCCCCCcEEEEEEEecc--cCceEEEEEcCCCCCCCCcccccccCCCceeceeeeeeeEEEEEEeecCCeeeee
Q 006927 509 IKFKLDSVDQNATYKLRIALATA--NVAELQVRVNDEKAEPPLFATGQIGHDNAIARHGIHGLYRLYSMDVPAANLAAGE 586 (625)
Q Consensus 509 I~F~L~~~~~~~~~tLriala~a--~~~~~~V~vNg~~~~~p~~~t~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G~ 586 (625)
|.|++.. +..|.|+|.|-.|.. ....+.|.|||..... ..++... ++. .|....+.|+ |++|.
T Consensus 41 v~~~V~v-~~aG~Y~l~~ryang~~~~r~~~l~VNG~~~~~-----v~~p~Tg-----~W~-~w~t~~~~v~---L~aG~ 105 (145)
T 2w3j_A 41 IVWSLSA-ASAKTYTAQIRFGNGGTSARRATVVVNDSQIKT-----LDFPTNS-----NWT-QWQTVNVDIP---LKAGT 105 (145)
T ss_dssp EEEEEEE-SSCEEEEEEEEEECCSSSCCCEEEEETTEEEEE-----ECCCCCS-----CTT-SCEEEEEEEE---ECSEE
T ss_pred EEEEEEC-CCCeEEEEEEEEECCCCCCeEEEEEECCeEeeE-----EEecCCC-----CCC-eeEEEEEEEE---ECCCc
Confidence 4455432 345889999999853 4567999999964310 1121111 000 1333344554 89999
Q ss_pred cEEEEEEecCCCCCceEEEEEEEEecCC
Q 006927 587 NTIFLKQATSSSAVAGVMYDYIRFEGPP 614 (625)
Q Consensus 587 NtI~l~~~~g~s~~~~vmyD~IrLe~p~ 614 (625)
|+|.|....+. .++-.|+|+|+...
T Consensus 106 ntI~l~~~~~~---g~~niD~i~v~~~~ 130 (145)
T 2w3j_A 106 NSIKLVAETAD---GLANIDSIRVTGNG 130 (145)
T ss_dssp EEEEEEECSTT---CCCEEEEEEECSTT
T ss_pred eEEEEEEecCc---CCEEEEEEEEEcCC
Confidence 99999964321 25788999998643
No 12
>2w47_A Lipolytic enzyme, G-D-S-L; hydrolase; HET: UNF; 1.40A {Clostridium thermocellum} PDB: 2w1w_A
Probab=94.98 E-value=0.11 Score=47.55 Aligned_cols=88 Identities=17% Similarity=0.240 Sum_probs=52.8
Q ss_pred EEEEecCCCCCCcEEEEEEEecc--cCceEEEEEcCCCC-CCCCcccccccCCCceeceeeeeeeEEEEEEeecCCeeee
Q 006927 509 IKFKLDSVDQNATYKLRIALATA--NVAELQVRVNDEKA-EPPLFATGQIGHDNAIARHGIHGLYRLYSMDVPAANLAAG 585 (625)
Q Consensus 509 I~F~L~~~~~~~~~tLriala~a--~~~~~~V~vNg~~~-~~p~~~t~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G 585 (625)
|.|++.. +..|.|+|+|-.+.. ....+.|.|||... . +..++.... +. .+....+.|+ |++|
T Consensus 42 v~~~V~v-~~aG~Y~l~~ryan~~~~~~~~~l~VNG~~~~~-----~v~~p~Tg~-----w~-~w~~~~~~v~---L~aG 106 (144)
T 2w47_A 42 IEWNVNA-PSSGSYALIFRYANGTTANRPMRITVNGNIVKP-----SMDFVSTGA-----WT-TWNEAGIVAN---LNQG 106 (144)
T ss_dssp EEEEEEE-SSSEEEEEEEEEECCSSSCCCEEEEETTEEEEE-----EECCCCCSS-----TT-CCEEEEEEEE---ECSE
T ss_pred EEEEEEC-CCCcEEEEEEEEECCCCCCeEEEEEECCeEeee-----EEEecCCCC-----CC-eeEEEEEEEE---ECCC
Confidence 4455432 345889999998875 35679999999742 1 001111110 00 1222233443 8899
Q ss_pred ecEEEEEEecCCCCCceEEEEEEEEecCC
Q 006927 586 ENTIFLKQATSSSAVAGVMYDYIRFEGPP 614 (625)
Q Consensus 586 ~NtI~l~~~~g~s~~~~vmyD~IrLe~p~ 614 (625)
.|+|.|....+ ..++-.|+|+|+...
T Consensus 107 ~ntI~l~~~~~---~g~~niD~i~v~~~~ 132 (144)
T 2w47_A 107 NNVIRATAIAS---DGGPNVDYLKVFSAN 132 (144)
T ss_dssp EEEEEEEECST---TCCCEEEEEEEEECT
T ss_pred ccEEEEEEeCC---CCCEEEeEEEEEeCC
Confidence 99999986422 225889999998644
No 13
>2vzp_A Aocbm35, EXO-beta-D-glucosaminidase; family 35, CSXA, glucuronic acid, hydrolase; 1.05A {Amycolatopsis orientalis} PDB: 2vzq_A* 2vzr_A*
Probab=93.51 E-value=0.38 Score=42.77 Aligned_cols=85 Identities=21% Similarity=0.278 Sum_probs=49.5
Q ss_pred EEEEecCCCCCCcEEEEEEEecc--cCceEEEEEcCCCCCCCCcccccccCCCceeceeeeeeeEEEEEEeecCCeeeee
Q 006927 509 IKFKLDSVDQNATYKLRIALATA--NVAELQVRVNDEKAEPPLFATGQIGHDNAIARHGIHGLYRLYSMDVPAANLAAGE 586 (625)
Q Consensus 509 I~F~L~~~~~~~~~tLriala~a--~~~~~~V~vNg~~~~~p~~~t~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G~ 586 (625)
|.|++.. +..+.|+|+|-.|.. ....+.|.|||..... ...++... ++. .+....+.|+ |++|.
T Consensus 41 v~~~V~v-~~aG~Y~l~~rya~~~~~~~~~~l~VnG~~~~~----~v~~p~tg-----~W~-~w~~~~~~v~---L~aG~ 106 (127)
T 2vzp_A 41 VEWTVTV-PSAGTYDVVVRYANGTTTSRPLDFSVNGSISAS----GVAFGSTG-----TWP-AWTTKTVRVT---LAAGV 106 (127)
T ss_dssp EEEEEEE-SSSEEEEEEEEEECCSSSCCCEEEEETTEEEEE----EECCCCCS-----STT-CCEEEEEEEE---ECSEE
T ss_pred EEEEEEc-CCCCEEEEEEEEEcCCCCCeEEEEEECCEEeee----EEEecCCC-----CCC-ceEEEEEEEE---ECCCc
Confidence 3444432 345889999999875 4567999999974210 01111110 010 1233334443 89999
Q ss_pred cEEEEEEecCCCCCceEEEEEEEE
Q 006927 587 NTIFLKQATSSSAVAGVMYDYIRF 610 (625)
Q Consensus 587 NtI~l~~~~g~s~~~~vmyD~IrL 610 (625)
|+|.|....+. -++-.|+|.+
T Consensus 107 ntI~l~~~~~~---~~~niD~i~v 127 (127)
T 2vzp_A 107 NKIKAVATTAN---GGPNVDKITL 127 (127)
T ss_dssp EEEEEEECSTT---CCCEEEEEEC
T ss_pred eEEEEEEeCCC---CCeEEEEEEC
Confidence 99999975322 1467788764
No 14
>2bgo_A Endo-B1,4-mannanase 5C; carbohydrate binding protein, carbohydrate binding module; NMR {Cellvibrio japonicus} PDB: 2bgp_A
Probab=93.24 E-value=0.4 Score=44.39 Aligned_cols=86 Identities=13% Similarity=0.179 Sum_probs=54.8
Q ss_pred EEEEEecCCCCCCcEEEEEEEecc-cCceEEEEEcCCCCCCCCcccccccCCCceeceeeeeeeEEEEEEeecCCeeeee
Q 006927 508 QIKFKLDSVDQNATYKLRIALATA-NVAELQVRVNDEKAEPPLFATGQIGHDNAIARHGIHGLYRLYSMDVPAANLAAGE 586 (625)
Q Consensus 508 ~I~F~L~~~~~~~~~tLriala~a-~~~~~~V~vNg~~~~~p~~~t~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G~ 586 (625)
.|.|+++ ++..|.|.|.|-.+.. ...+-.+.|||. ... -.++.... .+.+. . .=.|.+|.
T Consensus 37 sVtf~Vd-VP~tG~YdLsI~Ya~~~G~k~n~L~VNG~-~~~-----V~fP~tt~---------~~~~~-~--~V~L~aG~ 97 (140)
T 2bgo_A 37 AVIWNVD-VPVTGEYRINLTWSSPYSSKVNTLVMDGT-ALS-----YAFAEATV---------PVTYV-Q--TKTLSAGN 97 (140)
T ss_dssp EEEEEEC-CCSSEEEEEEEEECCCSSEEEEEEEETTE-EEE-----EEEESCCS---------CEEEE-E--EEEECSSC
T ss_pred EEEEEEe-cCCCcEEEEEEEeccCCCCceEEEEECCc-eeE-----EEECCcCC---------cEEEE-E--EEEecCCc
Confidence 4555554 3446899999999764 346678999986 321 11221110 11111 1 16788999
Q ss_pred cEEEEEEecCCCCCceEEEEEEEEecCC
Q 006927 587 NTIFLKQATSSSAVAGVMYDYIRFEGPP 614 (625)
Q Consensus 587 NtI~l~~~~g~s~~~~vmyD~IrLe~p~ 614 (625)
|+|.|.-- ++.|-++..|+|+|+...
T Consensus 98 NtI~i~~~--~g~WG~~~iD~I~l~~a~ 123 (140)
T 2bgo_A 98 HSFGVRVG--SSDWGYMNVHSLKLELLG 123 (140)
T ss_dssp EEEEEECC--SSSCCCCEEEEEEEEECC
T ss_pred cEEEEEec--CCCceeEEEEEEEEEcCC
Confidence 99999853 334668999999999766
No 15
>3kcp_A Cellulosomal-scaffolding protein A; dockerin, X-module, carbohydrate metabolism, cell WALL biogenesis/degradation; 1.94A {Clostridium thermocellum atcc 27405} PDB: 3p0d_C 4fl4_C 2b59_B
Probab=92.82 E-value=0.15 Score=53.22 Aligned_cols=64 Identities=20% Similarity=0.336 Sum_probs=46.8
Q ss_pred CceEEEEEEEEeccccc--cCCcccCceEEEecCCCCCCCcccccccceEEEEeCCCcceEeCcccCCe--eEEEEEEcc
Q 006927 313 QRGNISGRLQVQDRYVS--DDYITVDGAYVGLAPSGDAGSWQTECKGYQFWTTTDADGFFSISDILVGD--YNLYAFVPG 388 (625)
Q Consensus 313 qRGtVsG~v~~~d~~~~--~~~~pa~~a~V~La~~g~~g~~q~~~~~yqywt~td~~G~F~I~nVrpGt--Y~L~a~~~G 388 (625)
.-++|+|-|.. +-... .......++.|-+..++ .-+.+|++|+|+|.+|++|+ |+|.+..+|
T Consensus 156 ~~~~vsGYi~~-~~~~~~~~~~~~~~G~~V~i~gt~-------------~sa~tD~~G~f~I~~vp~~~~~ytl~i~~~g 221 (321)
T 3kcp_A 156 EGYKVSGYILP-DFSFDATVAPLVKAGFKVEIVGTE-------------LYAVTDANGYFEITGVPANASGYTLKISRAT 221 (321)
T ss_dssp SSEEEEEEEEE-SSCCCTTTHHHHHSCCEEEETTSS-------------CEEECCTTSEEEEEEECCEEEEEEEEEECTE
T ss_pred CCceEEEEEcc-ccccccccchhccCCcEEEEEecc-------------ceeEECCCceEEEeccCCCCccEEEEEeecC
Confidence 46899999853 31111 11234456788876544 47889999999999999999 999999988
Q ss_pred ee
Q 006927 389 FI 390 (625)
Q Consensus 389 ~~ 390 (625)
+.
T Consensus 222 ~l 223 (321)
T 3kcp_A 222 YL 223 (321)
T ss_dssp EC
T ss_pred ce
Confidence 66
No 16
>2xsu_A Catechol 1,2 dioxygenase; oxidoreductase; HET: PIE; 1.60A {Acinetobacter radioresistens} PDB: 2xsr_A* 2xsv_A*
Probab=88.68 E-value=0.83 Score=47.60 Aligned_cols=63 Identities=16% Similarity=0.197 Sum_probs=44.6
Q ss_pred CceEEEEEEEEeccccccCCcccCceEEEecCCCCCCCcccc---cccceE--EEEeCCCcceEeCcccCCeeE
Q 006927 313 QRGNISGRLQVQDRYVSDDYITVDGAYVGLAPSGDAGSWQTE---CKGYQF--WTTTDADGFFSISDILVGDYN 381 (625)
Q Consensus 313 qRGtVsG~v~~~d~~~~~~~~pa~~a~V~La~~g~~g~~q~~---~~~yqy--wt~td~~G~F~I~nVrpGtY~ 381 (625)
++-.|.|+|+-.+ +.|..+|.|=+-.....|....+ ..+... ...||++|.|.|.-|+||.|.
T Consensus 135 ~~l~v~G~V~D~~------G~Pv~gA~VeiWqada~G~Y~~~~~~~~~~~~rGr~~TD~~G~y~F~TI~Pg~Y~ 202 (312)
T 2xsu_A 135 DTLIIEGTVTDTE------GNIIEGAKVEVWHANSLGNYSFFDKSQSDFNLRRTILTDVNGKYVALTTMPVGYG 202 (312)
T ss_dssp CEEEEEEEEEETT------SCBCTTCEEEEECCCTTSCCBTTBTTSCTTTTEEEEECCTTSEEEEEEECCCCEE
T ss_pred eeEEEEEEEECCC------CCCCCCCEEEEEecCCCCcccCCCCCCCCCCCeeEEEeCCCceEEEEEECcCccc
Confidence 4789999986444 89999999998555444422211 011111 367899999999999999997
No 17
>2azq_A Catechol 1,2-dioxygenase; CTD, lipid, isozyme, intradiol, oxido; HET: PCF; 2.65A {Pseudomonas putida}
Probab=87.49 E-value=0.96 Score=47.09 Aligned_cols=64 Identities=19% Similarity=0.250 Sum_probs=45.5
Q ss_pred CCceEEEEEEEEeccccccCCcccCceEEEecCCCCCCCcccc---cccceE--EEEeCCCcceEeCcccCCeeE
Q 006927 312 NQRGNISGRLQVQDRYVSDDYITVDGAYVGLAPSGDAGSWQTE---CKGYQF--WTTTDADGFFSISDILVGDYN 381 (625)
Q Consensus 312 ~qRGtVsG~v~~~d~~~~~~~~pa~~a~V~La~~g~~g~~q~~---~~~yqy--wt~td~~G~F~I~nVrpGtY~ 381 (625)
.++=.|.|+|+-.+ +.|..+|.|=+-+....|....+ ..+... ...||++|.|.|.-|+||-|.
T Consensus 130 G~~l~v~G~V~D~~------G~Pv~gA~VeiWqada~G~Y~~~~~~~~~f~~rGr~~TD~~G~y~F~TI~Pg~Y~ 198 (311)
T 2azq_A 130 GVVMFLQGQVFDAN------GKPLAGATVDLWHANTQGTYSYFDSTQSEFNLRRRIITDAEGRYRARSIVPSGYG 198 (311)
T ss_dssp CCEEEEEEEEECSS------SCBCTTCEEEEECCCTTSCCBTTBTTSCTTTTEEEEECCTTCEEEEEEECCCCEE
T ss_pred CcEEEEEEEEEcCC------CCCCCCceeEEEecCCCCccCCCCCCCCCCCCeeEEEeCCCceEEEEEEcCCCcC
Confidence 46789999986443 89999999999655555433211 111212 367899999999999999997
No 18
>2boy_A 3-chlorocatechol 1,2-dioxygenase; beta barrel, oxidoreductase; HET: BHO LPP; 1.9A {Rhodococcus opacus}
Probab=87.35 E-value=0.63 Score=47.14 Aligned_cols=65 Identities=17% Similarity=0.245 Sum_probs=45.2
Q ss_pred CCceEEEEEEEEeccccccCCcccCceEEEecCCCCCCCccccc---ccce-E-EEEeCCCcceEeCcccCCeeEE
Q 006927 312 NQRGNISGRLQVQDRYVSDDYITVDGAYVGLAPSGDAGSWQTEC---KGYQ-F-WTTTDADGFFSISDILVGDYNL 382 (625)
Q Consensus 312 ~qRGtVsG~v~~~d~~~~~~~~pa~~a~V~La~~g~~g~~q~~~---~~yq-y-wt~td~~G~F~I~nVrpGtY~L 382 (625)
.++-.|.|+|+-. ++.|..+|.|=+-+....|....+. .+.. . ...||++|.|+|.-|+||.|.+
T Consensus 100 G~~l~l~G~V~D~------~G~Pv~~A~VeiWqada~G~Y~~~~~~~~~~~~rGr~~Td~~G~y~F~TI~Pg~Y~~ 169 (254)
T 2boy_A 100 GDTLIFRGEVVDQ------EGAPLADVLLDMWQADAAGEYSFINPTLPDYLFRGKIRTDENGRFTLRTIVPAPYEI 169 (254)
T ss_dssp SCEEEEEEEEECT------TSCBCCSCEEEEECCCTTSCCBTTBTTSCTTTTEEEEECCTTSEEEEEEECCCCEEC
T ss_pred CCEEEEEEEEECC------CCCCCCCCEEEEEcCCCCCccCCcCCCCCCCCCeeEEEeCCCceEEEEEECCccccC
Confidence 4678999998543 3899999999985554444222110 0111 2 3678999999999999999964
No 19
>1uxz_A Cellulase B; carbohydrate binding module, CBM6, mixted BETA1, 3-1, 4 linked glucan; 1.4A {Cellvibrio mixtus} SCOP: b.18.1.10 PDB: 1uy0_A* 1uyx_A* 1uyy_A* 1uyz_A* 1uz0_A*
Probab=87.11 E-value=2.2 Score=38.21 Aligned_cols=77 Identities=21% Similarity=0.297 Sum_probs=48.5
Q ss_pred CCcEEEEEEEecc-cCceEEEEEcCCCCCCCCcccccccCCCceeceeeeeeeEEEEEEeecCCeeeeecEEEEEEecCC
Q 006927 519 NATYKLRIALATA-NVAELQVRVNDEKAEPPLFATGQIGHDNAIARHGIHGLYRLYSMDVPAANLAAGENTIFLKQATSS 597 (625)
Q Consensus 519 ~~~~tLriala~a-~~~~~~V~vNg~~~~~p~~~t~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G~NtI~l~~~~g~ 597 (625)
.+.++|.+-.|+. ++++++|++++ .. |+..+-.++... +. -.|...+.+|+ |.+|.|+|+|....|
T Consensus 52 ~G~y~~~~rvas~~~gg~i~v~~~~-~g--~~~g~~~vp~Tg-----gw-~~w~t~~~~v~---l~~G~h~l~l~~~~g- 118 (131)
T 1uxz_A 52 SGSYLIEYRVASQNGGGSLTFEEAG-GA--PVHGTIAIPATG-----GW-QTWTTIQHTVN---LSAGSHQFGIKANAG- 118 (131)
T ss_dssp SEEEEEEEEEEESSCCEEEEEEETT-SC--SEEEEEEECCCS-----EE-EEEEEEEEEEE---ECSEEECEEEEEEEC-
T ss_pred CCceEEEEEEECCCCCcEEEEEECC-CC--CEeeEEEeCCCC-----CC-cccEEEEEEEE---eCCCeEEEEEEEcCC-
Confidence 4678877777775 46899999986 21 111121222221 11 13444555553 679999999998765
Q ss_pred CCCceEEEEEEEEec
Q 006927 598 SAVAGVMYDYIRFEG 612 (625)
Q Consensus 598 s~~~~vmyD~IrLe~ 612 (625)
++-.|.|+|+.
T Consensus 119 ----~~nld~~~f~~ 129 (131)
T 1uxz_A 119 ----GWNLNWIRINK 129 (131)
T ss_dssp ----CCEEEEEEEEE
T ss_pred ----CEEEEEEEEEE
Confidence 58889999873
No 20
>2y8k_A Arabinoxylanase, carbohydrate binding family 6; hydrolase; 1.47A {Clostridium thermocellum}
Probab=83.96 E-value=5.1 Score=43.68 Aligned_cols=87 Identities=14% Similarity=0.262 Sum_probs=55.1
Q ss_pred EEEEecCCCCCCcEEEEEEEecccCceEEEEEcCCCCCCCCcccccccCCCceeceeeeeeeEEEEEEeecCCeeeeecE
Q 006927 509 IKFKLDSVDQNATYKLRIALATANVAELQVRVNDEKAEPPLFATGQIGHDNAIARHGIHGLYRLYSMDVPAANLAAGENT 588 (625)
Q Consensus 509 I~F~L~~~~~~~~~tLriala~a~~~~~~V~vNg~~~~~p~~~t~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G~Nt 588 (625)
|.|++.. ...+.|+|.+-.|+.+++.++|+||+.... .+-.++..- +. -.|...+.+|. |.+|.|+
T Consensus 398 ~~y~v~~-~~~G~y~~~~rvas~~gg~i~v~~d~~~~~----g~~~vp~Tg-----gw-~~w~t~~~~v~---l~~G~~~ 463 (491)
T 2y8k_A 398 LEYTIRV-RNPGYYNLSLRVAGISGSRVQVSFGNQDKT----GVWELPATG-----GF-QTWTTATRQVF---LGAGLQK 463 (491)
T ss_dssp EEEEEEE-SSCEEEEEEEEEEECTTCEEEEEETTEESS----CSEECCCCS-----EE-EEEEEEEEEEE---ECSEEEE
T ss_pred EEEEEec-CCCccEEEEEEEEcCCCceEEEEECCccce----eEEEeCCCC-----CC-cccEEEEEEEE---eCCcEEE
Confidence 3455432 234778887777777788999999996421 011122111 11 13455555553 7899999
Q ss_pred EEEEEecCCCCCceEEEEEEEEecCC
Q 006927 589 IFLKQATSSSAVAGVMYDYIRFEGPP 614 (625)
Q Consensus 589 I~l~~~~g~s~~~~vmyD~IrLe~p~ 614 (625)
|+|+...| ++-.|.|+|+..+
T Consensus 464 l~l~~~~g-----~~nld~~~f~~~~ 484 (491)
T 2y8k_A 464 LRINALSG-----GFNLNWIELSPIL 484 (491)
T ss_dssp EEEEESSS-----SEEEEEEEEEEC-
T ss_pred EEEEEecC-----CEEEEEEEEecCC
Confidence 99998766 5999999998644
No 21
>3th1_A Chlorocatechol 1,2-dioxygenase; catechol 1,2-dioxygenase family, oxidoreductase, iron bindin; HET: 3PH GOL; 3.40A {Pseudomonas putida}
Probab=81.02 E-value=1.9 Score=43.80 Aligned_cols=64 Identities=16% Similarity=0.157 Sum_probs=45.2
Q ss_pred CceEEEEEEEEeccccccCCcccCceEEEecCCCCCCCccc--c-cccce-E-EEEeCCCcceEeCcccCCeeEE
Q 006927 313 QRGNISGRLQVQDRYVSDDYITVDGAYVGLAPSGDAGSWQT--E-CKGYQ-F-WTTTDADGFFSISDILVGDYNL 382 (625)
Q Consensus 313 qRGtVsG~v~~~d~~~~~~~~pa~~a~V~La~~g~~g~~q~--~-~~~yq-y-wt~td~~G~F~I~nVrpGtY~L 382 (625)
++=.|+|+|+-.+ +.|..+|.|=+-+...+|-... + ..... + ...||++|.|.+.-|+||-|-+
T Consensus 98 ~pl~v~G~V~D~~------G~Pv~gA~VeiWqad~~G~Y~~~~~~~~~~~~RG~~~TD~~G~y~F~TI~P~~Ypi 166 (260)
T 3th1_A 98 KPLIIRGTVRSDT------GELLAGAVIDVWHSTPDGLYSGIHDNIPVDYYRGKLVTDSQGNYRVRTTMPVPYQI 166 (260)
T ss_dssp CEEEEEEEEEETT------SCBCSSCEEEEEECCTTSCCTTTSTTCCTTBTEEEEECCTTSEEEEEEECCCCEEC
T ss_pred CEEEEEEEEECCC------CCCcCCcEEEEEecCCCCcccCcCCCCCCCCCceEEEeCCCCEEEEEEECCCCCCC
Confidence 4578999986544 8999999999966555553321 1 11111 2 3678999999999999999853
No 22
>2cdp_A Beta-agarase 1; carbohydrate-binding module, hydrolase; HET: GAL AAL; 1.59A {Saccharophagus degradans} PDB: 2cdo_A*
Probab=80.78 E-value=6.6 Score=36.50 Aligned_cols=82 Identities=15% Similarity=0.173 Sum_probs=46.7
Q ss_pred CCCcEEEEEEEecc-cCceEEEEEcCCCCCCCCcccccccCCCceeceeeeeeeEEEEEEeecCCeeeeecEEEEEEecC
Q 006927 518 QNATYKLRIALATA-NVAELQVRVNDEKAEPPLFATGQIGHDNAIARHGIHGLYRLYSMDVPAANLAAGENTIFLKQATS 596 (625)
Q Consensus 518 ~~~~~tLriala~a-~~~~~~V~vNg~~~~~p~~~t~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G~NtI~l~~~~g 596 (625)
..|.|+|.+-.|+. +++.++|+|||.....++. +-.++. .++ -.|...+ ...=.|.+|.|+|+|....+
T Consensus 77 ~aG~Y~i~~rvas~~~g~~i~l~vdg~~~~~~~g-~~~vp~------tGW-~~w~t~t--~~~v~L~aG~htL~l~~~g~ 146 (160)
T 2cdp_A 77 QAGNYTISYQAGSGVTGGSIEFLVNENGSWASKT-VTAVPN------QGW-DNFQPLN--GGSVYLSAGTHQVRLHGAGS 146 (160)
T ss_dssp SCEEEEEEEEEEBSSSSCEEEEEEECSSSEEEEE-EEECCB------SCT-TCCEEEE--EEEEEECSEEEEEEEEECSS
T ss_pred CCcEEEEEEEEEcCCCCceEEEEECCCCCceeee-EEEcCC------CCC-ceeEEee--eeEEEeCCCeEEEEEEEECC
Confidence 35788888888876 5678999999962100000 001111 111 1122222 21234678999999997543
Q ss_pred CCCCceEEEEEEEEe
Q 006927 597 SSAVAGVMYDYIRFE 611 (625)
Q Consensus 597 ~s~~~~vmyD~IrLe 611 (625)
+.+ ++-.|.|+|.
T Consensus 147 -~~~-~~Nld~~~f~ 159 (160)
T 2cdp_A 147 -NNW-QWNLDKFTLS 159 (160)
T ss_dssp -SSB-CCEEEEEEEE
T ss_pred -CCC-cEEEEEEEEE
Confidence 222 4688988885
No 23
>1dmh_A 1,2-CTD, catechol 1,2-dioxygenase; aromatic hydrocarbon degradation, alpha/beta FO metalloenzyme, substrate, oxidoreductase; HET: LIO; 1.70A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1dlq_A* 1dlm_A* 1dlt_A*
Probab=80.47 E-value=1.5 Score=45.66 Aligned_cols=63 Identities=17% Similarity=0.220 Sum_probs=44.1
Q ss_pred ceEEEEEEEEeccccccCCcccCceEEEecCCCCCCCccccc-----ccceE--EEEeCCCcceEeCcccCCeeEE
Q 006927 314 RGNISGRLQVQDRYVSDDYITVDGAYVGLAPSGDAGSWQTEC-----KGYQF--WTTTDADGFFSISDILVGDYNL 382 (625)
Q Consensus 314 RGtVsG~v~~~d~~~~~~~~pa~~a~V~La~~g~~g~~q~~~-----~~yqy--wt~td~~G~F~I~nVrpGtY~L 382 (625)
+=.|.|+|+-. ++.|..+|.|=+-+....|....+. .+... ...||++|.|.|.-|+||-|.+
T Consensus 133 ~l~l~G~V~D~------~G~Pv~~A~VeiWqada~G~Ys~~~~~~~~~~~~~RGr~~TD~~G~y~F~TI~Pg~Yp~ 202 (311)
T 1dmh_A 133 TLILHGTIFDA------DGKPLPNAKVEIWHANTKGFYSHFDPTGEQQAFNMRRSIITDENGQYRVRTILPAGYGC 202 (311)
T ss_dssp EEEEEEEEECT------TSCBCTTCEEEEEECCTTSCCTTSCTTSCCSTTTTEEEEECCTTSEEEEEEECCCCEEC
T ss_pred eEEEEEEEEcC------CCCCCCCcEEEEEccCCCcccCCcCCcccCCCCCCeeEEEeCCCceEEEEEEcCCcccC
Confidence 56899998643 3899999999986555554332111 11222 2668999999999999999963
No 24
>3t63_M 3,4-PCD, protocatechuate 3,4-dioxygenase beta chain; iron III dependent non-heme intradiol dioxygenase, oxidoredu; HET: GOL; 1.54A {Pseudomonas putida} PDB: 3mi1_M* 3mv4_M* 3mi5_M* 3mfl_M* 3mv6_M* 3t67_M 3pca_M* 3pcb_M* 2pcd_M* 3pce_M* 3pcf_M* 3pcc_M* 3pch_M* 3pci_M* 3pcj_M* 3pck_M* 3pcl_M* 3pcm_M* 3pcn_M* 3pcg_M ...
Probab=80.42 E-value=2.4 Score=42.45 Aligned_cols=67 Identities=21% Similarity=0.257 Sum_probs=48.0
Q ss_pred CCCCceEEEEEEEEeccccccCCcccCceEEEecCCCCCCCccccc--------ccceEE--EEeCCCcceEeCcccCCe
Q 006927 310 KWNQRGNISGRLQVQDRYVSDDYITVDGAYVGLAPSGDAGSWQTEC--------KGYQFW--TTTDADGFFSISDILVGD 379 (625)
Q Consensus 310 ~~~qRGtVsG~v~~~d~~~~~~~~pa~~a~V~La~~g~~g~~q~~~--------~~yqyw--t~td~~G~F~I~nVrpGt 379 (625)
+..++=.|.|+|+-.+ +.|..+|.|=+-+....|....+. .+...+ ..||++|.|.|.-|+||-
T Consensus 73 ~~G~~i~l~G~V~D~~------G~Pv~~A~VEiWqada~G~Y~~~~d~~~~~~~~~f~~rGr~~TD~~G~y~F~TI~Pg~ 146 (238)
T 3t63_M 73 PIGERIIVAGRVVDQY------GKPVPNTLVEMWQANAGGRYRHKNDRYLAPLDPNFGGVGRCLTDSDGYYSFRTIKPGP 146 (238)
T ss_dssp CSSCEEEEEEEEEETT------SCBCTTCEEEEEECCTTSCCSSTTCCCSSCCCTTCCCEEEEECCTTSEEEEEEECCCC
T ss_pred CCCcEEEEEEEEECCC------CCCCCCCEEEEEecCCCCCCCCccccccccCCCCcCceeEEEECCCceEEEEEECCcC
Confidence 3456789999986443 899999999986665555332111 122233 578999999999999999
Q ss_pred eEE
Q 006927 380 YNL 382 (625)
Q Consensus 380 Y~L 382 (625)
|..
T Consensus 147 Yp~ 149 (238)
T 3t63_M 147 APW 149 (238)
T ss_dssp EEE
T ss_pred ccC
Confidence 975
No 25
>2bum_B Protocatechuate 3,4-dioxygenase beta chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_B 1eoa_B 1eob_B* 1eoc_B* 1eo9_B 2buq_B 2bur_B* 2bux_B 2buy_B 2buz_B* 2bv0_B* 2buu_B* 2but_B* 2buv_B* 2buw_B*
Probab=79.81 E-value=3.4 Score=41.46 Aligned_cols=65 Identities=20% Similarity=0.272 Sum_probs=46.6
Q ss_pred CCceEEEEEEEEeccccccCCcccCceEEEecCCCCCCCccccc--------ccceE--EEEeCCCcceEeCcccCCeeE
Q 006927 312 NQRGNISGRLQVQDRYVSDDYITVDGAYVGLAPSGDAGSWQTEC--------KGYQF--WTTTDADGFFSISDILVGDYN 381 (625)
Q Consensus 312 ~qRGtVsG~v~~~d~~~~~~~~pa~~a~V~La~~g~~g~~q~~~--------~~yqy--wt~td~~G~F~I~nVrpGtY~ 381 (625)
.++=.|.|+|+-.+ +.|..+|.|=+-+....|....+. .+... ...||++|.|.|.-|+||-|.
T Consensus 76 G~~i~v~G~V~D~~------G~Pv~~A~VeiWqada~G~Y~~~~~~~~~~~~~~f~~rGr~~TD~~G~y~F~TI~Pg~Yp 149 (241)
T 2bum_B 76 GERVIVHGYVRDQF------GRPVKNALVEVWQANASGRYRHPNDQYIGAMDPNFGGCGRMLTDDNGYYVFRTIKPGPYP 149 (241)
T ss_dssp SCEEEEEEEEEETT------SCBCCSCEEEEECCCTTSCCSSTTCCCSSCCCTTCCCEEEEECCTTSEEEEEEECCCCEE
T ss_pred CcEEEEEEEEECCC------CCCCCCcEEEEEecCCCceeCCCCCCcccccCCCccceeEEEeCCCceEEEEEecCCccc
Confidence 45678999986443 899999999997666555332211 12222 256899999999999999996
Q ss_pred E
Q 006927 382 L 382 (625)
Q Consensus 382 L 382 (625)
.
T Consensus 150 ~ 150 (241)
T 2bum_B 150 W 150 (241)
T ss_dssp E
T ss_pred c
Confidence 5
No 26
>1tmx_A Hydroxyquinol 1,2-dioxygenase; beta barrel, oxidoreductase; HET: HGX; 1.75A {Pimelobacter simplex}
Probab=79.49 E-value=2.5 Score=43.61 Aligned_cols=65 Identities=15% Similarity=0.169 Sum_probs=46.5
Q ss_pred CCceEEEEEEEEeccccccCCcccCceEEEecCCCCCCCcccccc--cceEE--EEeCCCcceEeCcccCCeeEE
Q 006927 312 NQRGNISGRLQVQDRYVSDDYITVDGAYVGLAPSGDAGSWQTECK--GYQFW--TTTDADGFFSISDILVGDYNL 382 (625)
Q Consensus 312 ~qRGtVsG~v~~~d~~~~~~~~pa~~a~V~La~~g~~g~~q~~~~--~yqyw--t~td~~G~F~I~nVrpGtY~L 382 (625)
.++=.|.|+|+-.+ +.|..+|.|=+-+....|....+.. +..++ ..||++|.|.|.-|+||-|..
T Consensus 131 G~~l~v~G~V~D~~------G~Pv~~A~VEiWqada~G~Y~~~~~~~~~~~rGr~~TD~~G~y~F~TI~Pg~Yp~ 199 (293)
T 1tmx_A 131 GEPCWVEGTVTDTD------GNPVPDARIEVWEADDDGFYDVQYDDDRTAARAHLLSGPDGGYAFWAITPTPYPI 199 (293)
T ss_dssp SCEEEEEEEEEETT------SCBCTTCEEEEECCCTTSCCGGGSSSCCCCSEEEEECCTTSEEEEEEECCCCEEC
T ss_pred CCEEEEEEEEECCC------CCCCCCceeEEEecCCCCcccCCccCCCCCceeEEEeCCCceEEEEEECCCcccC
Confidence 45779999986544 8999999999966555543322111 22333 668999999999999999964
No 27
>2bum_A Protocatechuate 3,4-dioxygenase alpha chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_A 1eob_A* 1eoc_A* 1eoa_A 2buq_A 2bur_A* 2but_A 2buu_A* 2buv_A* 2buw_A* 1eo9_A 2bux_A 2buy_A 2buz_A* 2bv0_A*
Probab=78.85 E-value=2 Score=42.19 Aligned_cols=64 Identities=17% Similarity=0.304 Sum_probs=45.0
Q ss_pred CCceEEEEEEEEeccccccCCcccCceEEEecCCCCCCCccccc--------ccceEE--EEe-CCCcceEeCcccCCee
Q 006927 312 NQRGNISGRLQVQDRYVSDDYITVDGAYVGLAPSGDAGSWQTEC--------KGYQFW--TTT-DADGFFSISDILVGDY 380 (625)
Q Consensus 312 ~qRGtVsG~v~~~d~~~~~~~~pa~~a~V~La~~g~~g~~q~~~--------~~yqyw--t~t-d~~G~F~I~nVrpGtY 380 (625)
.++=.|.|+|+-. ++.|..+|.|=+-+....|....+. .+...+ ..| |++|.|++.-|+||-|
T Consensus 50 G~~l~v~G~V~D~------~G~Pv~~A~VeiWqada~G~Y~~~~~~~~~~~~~~f~~rGr~~T~d~~G~y~F~TI~Pg~y 123 (209)
T 2bum_A 50 GQRIRLEGQVFDG------LGLPLRDVLIEIWQADTNGVYPSQADTQGKQVDPNFLGWGRTGADFGTGFWSFNTIKPGAV 123 (209)
T ss_dssp SCEEEEEECEECT------TSCBCSSCEEEEECCCTTSCCSSTTCCSCSCCCTTCCCEEEEECCTTTCCEEEEEECCCCC
T ss_pred CCEEEEEEEEECC------CCCCCCCCEEEEEecCCCCcccCccCCcccccCCCccceeEEeeeCCCcEEEEEEEccCcc
Confidence 3567899998543 4899999999997666555332211 122222 566 9999999999999998
Q ss_pred E
Q 006927 381 N 381 (625)
Q Consensus 381 ~ 381 (625)
.
T Consensus 124 p 124 (209)
T 2bum_A 124 P 124 (209)
T ss_dssp B
T ss_pred c
Confidence 5
No 28
>1ti6_B Pyrogallol hydroxytransferase small subunit; molybdenum binding enzyme, MGD-cofactors, DMSO-reductase family, 4Fe-4S-cluster; HET: MGD BTT; 2.00A {Pelobacter acidigallici} SCOP: b.3.5.1 d.58.1.5 PDB: 1ti2_B* 1ti4_B* 1vld_N* 1vle_N* 1vlf_N*
Probab=77.54 E-value=2.3 Score=43.30 Aligned_cols=48 Identities=21% Similarity=0.319 Sum_probs=38.8
Q ss_pred EEeCCCcceEeCcccCCeeEEEEEEcceeeeeeeeeEEEEeCCCceeccceEE
Q 006927 362 TTTDADGFFSISDILVGDYNLYAFVPGFIGDYRNDVVLTITEDSDIDMGDLVF 414 (625)
Q Consensus 362 t~td~~G~F~I~nVrpGtY~L~a~~~G~~G~~~~~~~VtV~aG~t~~l~~l~~ 414 (625)
+++|+.|.|-+..+.+|.|+|.+.+.|+ ....++.| .|+.+.||++.+
T Consensus 227 ~~~d~~G~f~~~~l~~G~y~v~v~a~g~----p~~~~~~~-~~~~~~lg~v~l 274 (274)
T 1ti6_B 227 AETNFFGEFKFDALDNGEYTVEIDADGK----SYSDTVVI-DDKSVDLGFIKL 274 (274)
T ss_dssp EECCTTSEEEEEEECSEEEEEEEEETTE----EEEEEEEE-SSSCEEEEEEEC
T ss_pred EeecCcCcEEEeccCCcceEEEEecCCC----CccceeEE-ccCccccceeeC
Confidence 5679999999999999999999998654 44456778 777778887753
No 29
>2h4e_A Transthyretin; amyloid, sulfite, familial amyloidotic polyne transport protein; HET: CSU; 1.45A {Homo sapiens} SCOP: b.3.4.1 PDB: 2wqa_A* 1zcr_A 1zd6_A 2trh_A 1bz8_A 2qpf_A 1tfp_A
Probab=77.14 E-value=1.8 Score=39.38 Aligned_cols=68 Identities=10% Similarity=0.067 Sum_probs=45.7
Q ss_pred CceEEEEEEEEeccccccCCcccCceEEEecCCCCCCCcccccccceEEEEeCCCcceE----eCcccCCeeEEEEEEcc
Q 006927 313 QRGNISGRLQVQDRYVSDDYITVDGAYVGLAPSGDAGSWQTECKGYQFWTTTDADGFFS----ISDILVGDYNLYAFVPG 388 (625)
Q Consensus 313 qRGtVsG~v~~~d~~~~~~~~pa~~a~V~La~~g~~g~~q~~~~~yqywt~td~~G~F~----I~nVrpGtY~L~a~~~G 388 (625)
.++.++=+|+-.- .|+||.++.|-|......+.|+. -.-+.||+||+.. -..+.+|.|+|..-
T Consensus 8 ~~~~LStHVLDt~-----~G~PAagv~V~L~~~~~~~~w~~-----l~~~~Tn~DGR~~~ll~~~~~~~G~Y~L~F~--- 74 (127)
T 2h4e_A 8 SKXPLMVKVLDAV-----RGSPAINVAVHVFRKAADDTWEP-----FASGKTSESGELHGLTTEEEFVEGIYKVEID--- 74 (127)
T ss_dssp --CCEEEEEEETT-----TTEECTTCEEEEEEECTTSCEEE-----EEEEECCTTSEECCSCCTTTCCSEEEEEEEC---
T ss_pred CcCCEEEEEecCC-----CcCCCCCCEEEEEEeCCCCCeEE-----EEEeecCCCccccCcCCCCCccceEEEEEEE---
Confidence 4677888886443 48999999999964321223441 2346789999872 34588999999986
Q ss_pred eeeeee
Q 006927 389 FIGDYR 394 (625)
Q Consensus 389 ~~G~~~ 394 (625)
.|+|-
T Consensus 75 -tg~Yf 79 (127)
T 2h4e_A 75 -TKSYW 79 (127)
T ss_dssp -HHHHH
T ss_pred -hHHhH
Confidence 56554
No 30
>3n9t_A PNPC; phospholipid binds, N-terminal helix tunnel, oxidoreductase; HET: HGX FLC; 2.00A {Pseudomonas putida}
Probab=77.02 E-value=3.9 Score=42.16 Aligned_cols=65 Identities=20% Similarity=0.214 Sum_probs=46.7
Q ss_pred CCceEEEEEEEEeccccccCCcccCceEEEecCCCCCCCcccc---cccceEE--EEeCCCcceEeCcccCCeeEE
Q 006927 312 NQRGNISGRLQVQDRYVSDDYITVDGAYVGLAPSGDAGSWQTE---CKGYQFW--TTTDADGFFSISDILVGDYNL 382 (625)
Q Consensus 312 ~qRGtVsG~v~~~d~~~~~~~~pa~~a~V~La~~g~~g~~q~~---~~~yqyw--t~td~~G~F~I~nVrpGtY~L 382 (625)
.++=.|.|+|+-.+ +.|..+|.|=+-.....|....+ ..+...+ ..||++|.|.|.-|+||-|..
T Consensus 127 G~~l~l~G~V~D~~------G~Pv~~A~VeiWqada~G~Y~~~~~~~~~~~lRGr~~TD~~G~y~F~TI~Pg~Yp~ 196 (290)
T 3n9t_A 127 GVPALVYGRVLDVQ------GRPVVGAVLDVWQTADNGMYSGQDPDQPFGNLRGRYRSDNDGCFAIQTTVPVCYPI 196 (290)
T ss_dssp SCEEEEEEEEEETT------SCBCSSCEEEEECCCTTSCCTTTSTTSCTTTTEEEEECCTTSEEEEEEECCCCEEC
T ss_pred CCeEEEEEEEECCC------CCCCCCCEEEEEccCCCCCcCCCCCCCCCCCceeEEEeCCCceEEEEEeCCCCcCC
Confidence 45788999986444 89999999999666555533311 1112223 578999999999999999974
No 31
>3hhy_A 1,2-CTD, catechol 1,2-dioxygenase; beta-sandwich, aromatic hydrocarbons catabolism, dioxygenase metal-binding, oxidoreductase; HET: 6PL; 1.55A {Rhodococcus opacus} PDB: 3hhx_A* 3hgi_A* 3hj8_A* 3hjq_A* 3hjs_A* 3i4v_A* 3hkp_A* 3i51_A* 3i4y_A*
Probab=76.07 E-value=2.9 Score=42.84 Aligned_cols=63 Identities=21% Similarity=0.274 Sum_probs=44.1
Q ss_pred ceEEEEEEEEeccccccCCcccCceEEEecCCCCCCCccccc---ccceE--EEEeCCCcceEeCcccCCeeEE
Q 006927 314 RGNISGRLQVQDRYVSDDYITVDGAYVGLAPSGDAGSWQTEC---KGYQF--WTTTDADGFFSISDILVGDYNL 382 (625)
Q Consensus 314 RGtVsG~v~~~d~~~~~~~~pa~~a~V~La~~g~~g~~q~~~---~~yqy--wt~td~~G~F~I~nVrpGtY~L 382 (625)
+=.|.|+|+-.+ +.|..+|.|=+-+....|....+. .+... ...||++|.|.|.-|+||-|-+
T Consensus 131 pl~l~G~V~D~~------G~Pv~~A~VeiWqada~G~Ys~~~~~~~~~~lRGr~~TD~dG~y~F~TI~Pg~Yp~ 198 (280)
T 3hhy_A 131 PLVFSGQVTDLD------GNGLAGAKVELWHADNDGYYSQFAPHLPEWNLRGTIIADEEGRYEITTIQPAPYQI 198 (280)
T ss_dssp EEEEEEEEECTT------SCBCSSCEEEEECCCTTSCCTTSSTTSCTTTTEEEEECCTTSEEEEEEECCCCEEC
T ss_pred EEEEEEEEECCC------CCCCCCcEEEEEecCCCCCCCCCCCCCCCCcceEEEEeCCCceEEEEEECCcCcCC
Confidence 458899986433 899999999986655554332111 11122 3678999999999999999963
No 32
>3t63_A 3,4-PCD, protocatechuate 3,4-dioxygenase alpha chain; iron III dependent non-heme intradiol dioxygenase, oxidoredu; HET: GOL; 1.54A {Pseudomonas putida} PDB: 1ykl_A* 1ykm_A* 1ykn_A* 1yko_A* 1ykp_A* 2pcd_A 1ykk_A* 3lmx_A* 3lxv_A* 3mfl_A* 3mi1_A* 3mi5_A* 3lkt_A* 3mv6_A* 3pca_A* 3pcb_A* 3pcc_A* 3pcd_A 3pce_A* 3pcf_A* ...
Probab=75.73 E-value=2.4 Score=41.37 Aligned_cols=65 Identities=15% Similarity=0.237 Sum_probs=45.1
Q ss_pred CCceEEEEEEEEeccccccCCcccCceEEEecCCCCCCCccccc---ccceEE--EEeCCC-cceEeCcccCCeeEE
Q 006927 312 NQRGNISGRLQVQDRYVSDDYITVDGAYVGLAPSGDAGSWQTEC---KGYQFW--TTTDAD-GFFSISDILVGDYNL 382 (625)
Q Consensus 312 ~qRGtVsG~v~~~d~~~~~~~~pa~~a~V~La~~g~~g~~q~~~---~~yqyw--t~td~~-G~F~I~nVrpGtY~L 382 (625)
.++=.|.|+|+-. ++.|..+|.|=+-+....|....+. .+...+ ..||++ |.|.+.-|+||-|..
T Consensus 46 G~~l~v~G~V~D~------~G~Pv~~A~VeiWqada~G~Y~~~~~~~~~f~~rGr~~TD~~~G~~~F~TI~Pg~Y~~ 116 (200)
T 3t63_A 46 GEHILLLGQVYDG------NGHLVRDSFLEVWQADANGEYQDAYNLENAFNSFGRTATTFDAGEWTLHTVKPGVVNN 116 (200)
T ss_dssp SCEEEEEECEECT------TSCBCSSCEEEEEECCTTSCCCCBCCTTSSBCSEEEEECCSSCCSEEEEEECCCCEEC
T ss_pred CCEEEEEEEEECC------CCCCCCCCEEEEEccCCCCCcCCCCCCCCCccccceEecCCCCCEEEEEEECCcCcCC
Confidence 3467899998543 3899999999986555444332111 112233 568998 999999999999974
No 33
>1w9s_A BH0236 protein, BHCBM6; carbohydrate-binding module, lectin, beta-glucan, carbohydrate binding, glycoside hydrolase; 1.59A {Bacillus halodurans} SCOP: b.18.1.10 PDB: 1w9t_A* 1w9w_A*
Probab=74.42 E-value=22 Score=31.95 Aligned_cols=81 Identities=11% Similarity=0.204 Sum_probs=48.4
Q ss_pred CcEEEEEEEecc-cCceEEEEEcCCCCCCCCcccccccCCCceeceeeeeeeEEEEEEeecCCeeeeecEEEEEEecCCC
Q 006927 520 ATYKLRIALATA-NVAELQVRVNDEKAEPPLFATGQIGHDNAIARHGIHGLYRLYSMDVPAANLAAGENTIFLKQATSSS 598 (625)
Q Consensus 520 ~~~tLriala~a-~~~~~~V~vNg~~~~~p~~~t~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G~NtI~l~~~~g~s 598 (625)
+.++|.+-+|+. +++.++|++++.+.+ +..+-.++... ---.|...+.+|+ +.+|.+.|+|....+.+
T Consensus 59 G~~~~~~rvas~~~gg~iev~~d~~~G~--~~gt~~v~~Tg------gw~~w~t~~~~v~---~~~G~h~l~l~f~g~~~ 127 (142)
T 1w9s_A 59 DASSIEVRVASDTPGGRIEIRTGSPTGT--LLGDVQVPNTG------GWQQWQTVTGNVQ---IQPGTYDVYLVFKGSPE 127 (142)
T ss_dssp CEEEEEEEEEESSSCEEEEEEESSTTSC--EEEEEEECCCS------EEEEEEEEEEEEE---ECSEEEEEEEEEESCTT
T ss_pred CcEEEEEEEEcCCCCeEEEEEECCCCCe--EEEEEEeCCCC------CCcccEEEEEEEc---cCCcEEEEEEEEECCCC
Confidence 567666666665 468999999986542 11121222211 1124555666654 46899999999764311
Q ss_pred CCceEEEEEEEEec
Q 006927 599 AVAGVMYDYIRFEG 612 (625)
Q Consensus 599 ~~~~vmyD~IrLe~ 612 (625)
. .-+-.|.++|+.
T Consensus 128 ~-~~~nld~~~f~~ 140 (142)
T 1w9s_A 128 Y-DLMNVNWFVFRA 140 (142)
T ss_dssp S-CCCEEEEEEEEC
T ss_pred c-ceEEEEEEEEEe
Confidence 1 127788888874
No 34
>3o5u_A Chlorocatechol 1,2-dioxygenase; beta barrel,oxidoreductase, oxidoreductase; HET: MYY DHB; 2.35A {Rhodococcus opacus} PDB: 3o32_A* 1s9a_A* 3o6j_A* 3o6r_A*
Probab=72.17 E-value=4.1 Score=41.31 Aligned_cols=63 Identities=17% Similarity=0.255 Sum_probs=44.8
Q ss_pred CceEEEEEEEEeccccccCCcccCceEEEecCCCCCCCcccc---ccc-ceEE--EEeCCCcceEeCcccCCeeE
Q 006927 313 QRGNISGRLQVQDRYVSDDYITVDGAYVGLAPSGDAGSWQTE---CKG-YQFW--TTTDADGFFSISDILVGDYN 381 (625)
Q Consensus 313 qRGtVsG~v~~~d~~~~~~~~pa~~a~V~La~~g~~g~~q~~---~~~-yqyw--t~td~~G~F~I~nVrpGtY~ 381 (625)
++=.|.|+|+-. ++.|..+|.|=+-+....|....+ ..+ ...+ ..||++|.|++.-|+||-|-
T Consensus 102 ~~l~l~G~V~D~------~G~Pv~~A~VeiWqada~G~Ys~~~~~~~~~~~~RGr~~TD~~G~y~F~TI~Pg~Yp 170 (257)
T 3o5u_A 102 DRMRFTGSVRDT------SGTPITGAVIDVWHSTNDGNYSFFSPALPDQYLLRGRVVPAEDGSIEFHSIRPVPYE 170 (257)
T ss_dssp CEEEEEEEEECT------TCCBCTTCEEEEECCCTTSCCTTSCTTSCSSCTTEEEECCCTTSEEEEEEECCCCEE
T ss_pred CEEEEEEEEECC------CCCCCCCcEEEEEecCCCCCCCCcCCCCCcccCceeEEEeCCCceEEEEEECCCCcC
Confidence 467899998643 389999999999666555533211 011 2222 56899999999999999995
No 35
>3irp_X URO-adherence factor A; DEV-IGG fold, cell WALL, hemagglutinin, peptidoglycan-anchor secreted, virulence, cell adhesion; 1.50A {Staphylococcus saprophyticus subsp} PDB: 3irz_A 3is0_X 3is1_X
Probab=72.08 E-value=6.3 Score=42.70 Aligned_cols=65 Identities=25% Similarity=0.353 Sum_probs=45.5
Q ss_pred CceEEEEEEEEecc----ccccCCcccCceEEEecCCCCCCCcccccccceEEEEeCCCcceEeCcccCCeeEEEEEEc
Q 006927 313 QRGNISGRLQVQDR----YVSDDYITVDGAYVGLAPSGDAGSWQTECKGYQFWTTTDADGFFSISDILVGDYNLYAFVP 387 (625)
Q Consensus 313 qRGtVsG~v~~~d~----~~~~~~~pa~~a~V~La~~g~~g~~q~~~~~yqywt~td~~G~F~I~nVrpGtY~L~a~~~ 387 (625)
+-++|.|.|-. |. .......|..++.|-|..+. |. .---+.||++|.|.+.+++||+|++.+-+|
T Consensus 304 G~~~igg~Vw~-D~n~nG~~D~~e~gl~gv~v~L~d~~--G~-------~v~tttTd~~G~Y~F~~L~~G~Y~V~~~~P 372 (429)
T 3irp_X 304 GFGGFGGYVWF-DKNNDGVQNDSNAAAAGITVNLLDPT--GI-------RLATTTTDITGHYNFDNLTNGNYLVEFVMP 372 (429)
T ss_dssp CEEEEEEEEEE-CTTSSSSSCCSSCBCTTCEEEEECTT--SC-------EEEEEECCTTSEEEEEEEESEEEEEEECCC
T ss_pred ceEEEccEEEE-eCCCCCCcCcCCCCcCCeEEEEEcCC--CC-------EEEEEEeCCCCeEEeCCCCCCcEEEEEECC
Confidence 34678888764 32 11223467888999985332 22 225688999999999999999999987654
No 36
>2v4v_A GH59 galactosidase; hydrolase, family 6 carbohydrate binding module, CCCBM6; HET: XYP; 1.50A {Clostridium cellulolyticum}
Probab=71.89 E-value=19 Score=31.76 Aligned_cols=79 Identities=14% Similarity=0.211 Sum_probs=45.5
Q ss_pred CcEEEEEEEecc-cCceEEEEEcCCCCCCCCcccccccCCCceeceeeeeeeEEEEEEeecCCeeeeecEEEEEEecCCC
Q 006927 520 ATYKLRIALATA-NVAELQVRVNDEKAEPPLFATGQIGHDNAIARHGIHGLYRLYSMDVPAANLAAGENTIFLKQATSSS 598 (625)
Q Consensus 520 ~~~tLriala~a-~~~~~~V~vNg~~~~~p~~~t~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G~NtI~l~~~~g~s 598 (625)
+.+++.+-+|++ +++.++|++++.+.+ +..+-.++... --..|...+.+|+ +.+|...|+|....++
T Consensus 49 G~~~~~~rvas~~~gg~ievrlds~~G~--~~g~~~v~~Tg------gw~~~~t~~~~v~---~~~G~h~l~l~f~g~~- 116 (129)
T 2v4v_A 49 GVGGFQARVASATSGGNIEIRLDSSTGT--LIGTCPVAGTG------DWQTYTDAKCTVS---GVTGKHDVYLVFKGDS- 116 (129)
T ss_dssp CCCEEEEEEEESSCCEEEEEEESSTTSC--EEEEEEECCCS------EEEEEEEEEEECC---CCEEEEEEEEEEECSS-
T ss_pred CeEEEEEEEEcCCCCcEEEEEECCCCCe--EEEEEEecCCC------CCceeEEEEEEEc---cCCceEEEEEEEECCC-
Confidence 445555555554 567999999976542 11121222211 1124555555553 5789999999976543
Q ss_pred CCceEEEEEEEEe
Q 006927 599 AVAGVMYDYIRFE 611 (625)
Q Consensus 599 ~~~~vmyD~IrLe 611 (625)
.. -+-.|.++|+
T Consensus 117 ~~-~~nld~~~f~ 128 (129)
T 2v4v_A 117 GY-LFNLNWFTFS 128 (129)
T ss_dssp SC-CCEEEEEEEE
T ss_pred Cc-eEEEEEEEEE
Confidence 21 2677888775
No 37
>2g2n_A Transthyretin-like protein; transthyretin-related protein, unknown functi; 1.65A {Escherichia coli} PDB: 2g2p_A 2igl_A 2gpz_A
Probab=71.52 E-value=5 Score=35.81 Aligned_cols=67 Identities=25% Similarity=0.276 Sum_probs=44.4
Q ss_pred CceEEEEEEEEeccccccCCcccCceEEEecCCCCCCCcccccccceEEEEeCCCcceE----eCcccCCeeEEEEEEcc
Q 006927 313 QRGNISGRLQVQDRYVSDDYITVDGAYVGLAPSGDAGSWQTECKGYQFWTTTDADGFFS----ISDILVGDYNLYAFVPG 388 (625)
Q Consensus 313 qRGtVsG~v~~~d~~~~~~~~pa~~a~V~La~~g~~g~~q~~~~~yqywt~td~~G~F~----I~nVrpGtY~L~a~~~G 388 (625)
+|+.++=+|+-.- .|+||.++.|-|..... +.|+ .-.-+.||+||+.. -..+.+|.|+|..-
T Consensus 2 ~~~~lstHVLDt~-----~G~PAagv~V~L~~~~~-~~~~-----~l~~~~Tn~DGR~~~l~~~~~~~~G~Y~l~F~--- 67 (114)
T 2g2n_A 2 QQNILSVHILNQQ-----TGKPAADVTVTLEKKAD-NGWL-----QLNTAKTDKDGRIKALWPEQTATTGDYRVVFK--- 67 (114)
T ss_dssp --CCEEEEEEETT-----TTEECCSCEEEEEEECS-SSEE-----EEEEEECCTTSEESCCSCSSCCCSEEEEEEEC---
T ss_pred CCCCeEEEEecCC-----CcCCCCCCEEEEEEeCC-CCcE-----EEEEEecCCCCccccccCCCCCCceEEEEEEE---
Confidence 5778888886443 48999999999964221 1243 12346689999863 23578899999986
Q ss_pred eeeeee
Q 006927 389 FIGDYR 394 (625)
Q Consensus 389 ~~G~~~ 394 (625)
.|+|-
T Consensus 68 -tg~Yf 72 (114)
T 2g2n_A 68 -TGDYF 72 (114)
T ss_dssp -HHHHH
T ss_pred -hhHhH
Confidence 55554
No 38
>1uxx_X Xylanase U; carbohydrate binding module, CBM6, xylopentaose binding, xylan degradation; HET: XYP; 1.6A {Clostridium thermocellum} SCOP: b.18.1.10 PDB: 1gmm_A*
Probab=68.88 E-value=30 Score=30.78 Aligned_cols=77 Identities=17% Similarity=0.298 Sum_probs=46.8
Q ss_pred CcEEEEEEEecc--cCceEEEEEcCCCCCCCCcccccccCCCceeceeeeeeeEEEEEEeecCCeeeeecEEEEEEecCC
Q 006927 520 ATYKLRIALATA--NVAELQVRVNDEKAEPPLFATGQIGHDNAIARHGIHGLYRLYSMDVPAANLAAGENTIFLKQATSS 597 (625)
Q Consensus 520 ~~~tLriala~a--~~~~~~V~vNg~~~~~p~~~t~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G~NtI~l~~~~g~ 597 (625)
+.+++.+-+|+. .++.++|++++.+.. +..+-.++... ---.|...+.+|+ +.+|...|+|.. .|
T Consensus 51 G~~~~~~rvas~~~~gg~ievr~ds~~G~--~~gt~~v~~Tg------gw~~~~~~~~~v~---~~~G~h~l~l~f-~G- 117 (133)
T 1uxx_X 51 GANSFKARVASGADTPTNIQLRLGSPTGT--LIGTLTVASTG------GWNNYEEKSCSIT---NTTGQHDLYLVF-SG- 117 (133)
T ss_dssp CEEEEEEEEEECCSSCEEEEEEESSTTSE--EEEEEEECCCS------EEEEEEEEEEEEE---EECSEEEEEEEE-SS-
T ss_pred CcEEEEEEEEeCCCCCcEEEEEECCCCCc--EEEEEEeCCCC------CCceEEEEEEEEc---cCCcEEEEEEEE-EC-
Confidence 566666666654 357999999986532 11121222221 1124555556554 468999999976 45
Q ss_pred CCCceEEEEEEEEecC
Q 006927 598 SAVAGVMYDYIRFEGP 613 (625)
Q Consensus 598 s~~~~vmyD~IrLe~p 613 (625)
.+-.|.++++.+
T Consensus 118 ----~~nl~~~~f~~~ 129 (133)
T 1uxx_X 118 ----PVNIDYFIFDSN 129 (133)
T ss_dssp ----CCEEEEEEEECC
T ss_pred ----CcEEEEEEEEcC
Confidence 378899998864
No 39
>1oo2_A Transthyretin; retinol-binding protein, tetramer, transport protein; 1.56A {Sparus aurata} SCOP: b.3.4.1 PDB: 1sn2_A 1sn0_A 1sn5_A*
Probab=67.55 E-value=3.4 Score=37.12 Aligned_cols=65 Identities=14% Similarity=0.117 Sum_probs=42.1
Q ss_pred EEEEEEEEeccccccCCcccCceEEEecCCCCCCCcccccccceEEEEeCCCcce----EeCcccCCeeEEEEEEcceee
Q 006927 316 NISGRLQVQDRYVSDDYITVDGAYVGLAPSGDAGSWQTECKGYQFWTTTDADGFF----SISDILVGDYNLYAFVPGFIG 391 (625)
Q Consensus 316 tVsG~v~~~d~~~~~~~~pa~~a~V~La~~g~~g~~q~~~~~yqywt~td~~G~F----~I~nVrpGtY~L~a~~~G~~G 391 (625)
.++=+|+-.- .|+||.++.|-|.....++.|+ .-.-+.||+||+. .-..+.+|.|+|..- .|
T Consensus 3 ~lstHVLDt~-----~G~PAagv~V~L~~~~~~~~~~-----~l~~~~Tn~DGR~~~l~~~~~~~~G~Y~l~F~----tg 68 (119)
T 1oo2_A 3 PLMVKILDAV-----KGTPAGSVALKVSQKTADGGWT-----QIATGVTDATGEIHNLITEQQFPAGVYRVEFD----TK 68 (119)
T ss_dssp SEEEEEEETT-----TTEECTTCEEEEEEECTTSCEE-----EEEEEECCTTSCCTTCSCGGGCCSEEEEEEEC----HH
T ss_pred ceeEEEecCC-----CcCCCCCCEEEEEEeCCCCCcE-----EEEEEecCCCCcccCcCCCCCCCceEEEEEEE----hH
Confidence 3455554332 4899999999996432112344 1234678999986 233578999999986 56
Q ss_pred eee
Q 006927 392 DYR 394 (625)
Q Consensus 392 ~~~ 394 (625)
+|-
T Consensus 69 ~Yf 71 (119)
T 1oo2_A 69 AYW 71 (119)
T ss_dssp HHH
T ss_pred HhH
Confidence 554
No 40
>4ank_A Transthyretin; hormone binding protein, thyroxine transport protein, hormon amyloidosis inhibition; 1.70A {Homo sapiens}
Probab=66.00 E-value=4.9 Score=37.41 Aligned_cols=67 Identities=10% Similarity=0.052 Sum_probs=46.3
Q ss_pred ceEEEEEEEEeccccccCCcccCceEEEecCCCCCCCcccccccceEEEEeCCCcceEe----CcccCCeeEEEEEEcce
Q 006927 314 RGNISGRLQVQDRYVSDDYITVDGAYVGLAPSGDAGSWQTECKGYQFWTTTDADGFFSI----SDILVGDYNLYAFVPGF 389 (625)
Q Consensus 314 RGtVsG~v~~~d~~~~~~~~pa~~a~V~La~~g~~g~~q~~~~~yqywt~td~~G~F~I----~nVrpGtY~L~a~~~G~ 389 (625)
|.-++=+|+-.- .|.||.++.|-|.....++.|+. -.-..||+||+..- ....+|.|+|...
T Consensus 29 k~PLTtHVLDt~-----~G~PA~gv~V~L~~~~~~~~~~~-----l~~~~Td~DGR~~~ll~~~~~~~G~Y~L~F~---- 94 (147)
T 4ank_A 29 KCPLMVKVLDAV-----RGSPAINVAVHVFRKAADDTWEP-----FASGKTSESGELHGLTTEEEFVEGIYKVEID---- 94 (147)
T ss_dssp -CCEEEEEEETT-----TTEECCSCEEEEEEECTTSCEEE-----EEEEECCTTSEECCSCCTTTCCSEEEEEEEC----
T ss_pred CCCeEEEEEeCC-----CCcCCCCCEEEEEEECCCCCeEE-----EEEEEeCCCCCCCCCCCccccCCceEEEEEE----
Confidence 566888886442 48999999999965444445542 23467999998642 3567899999987
Q ss_pred eeeee
Q 006927 390 IGDYR 394 (625)
Q Consensus 390 ~G~~~ 394 (625)
.|+|-
T Consensus 95 tg~Yf 99 (147)
T 4ank_A 95 TKSYW 99 (147)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 56554
No 41
>1f86_A Transthyretin Thr119Met variant; protein stability, X-RAY amyloidogenesis, transport protein; HET: T44; 1.10A {Homo sapiens} SCOP: b.3.4.1 PDB: 1fhn_A 1bze_A 1fh2_A 1bzd_A 3fcb_A* 3fc8_A* 3cfm_A 3cfn_A* 3cfq_A* 3cft_A* 3m1o_A* 1bmz_A 1bm7_A 1e3f_A* 1e5a_A* 1e4h_A 1ict_A* 1tt6_A* 1tta_A 1tyr_A* ...
Probab=63.81 E-value=5.5 Score=35.59 Aligned_cols=55 Identities=13% Similarity=0.085 Sum_probs=37.9
Q ss_pred CCcccCceEEEecCCCCCCCcccccccceEEEEeCCCcceE----eCcccCCeeEEEEEEcceeeeee
Q 006927 331 DYITVDGAYVGLAPSGDAGSWQTECKGYQFWTTTDADGFFS----ISDILVGDYNLYAFVPGFIGDYR 394 (625)
Q Consensus 331 ~~~pa~~a~V~La~~g~~g~~q~~~~~yqywt~td~~G~F~----I~nVrpGtY~L~a~~~G~~G~~~ 394 (625)
.|+||.++.|-|.....++.|+ .-.-+.||+||+.. -..+.+|.|+|..- .|+|-
T Consensus 12 ~G~PAagv~V~L~~~~~~~~~~-----~l~~~~Tn~DGR~~~l~~~~~~~~G~Y~l~F~----tg~Yf 70 (115)
T 1f86_A 12 RGSPAINVAVHVFRKAADDTWE-----PFASGKTSESGELHGLTTEEEFVEGIYKVEID----TKSYW 70 (115)
T ss_dssp TTEECTTCEEEEEEECTTSCEE-----EEEEEECCTTSEECCSCCTTTCCSEEEEEEEC----HHHHH
T ss_pred CCCcCCCCEEEEEEcCCCCCcE-----EEEEeecCCCccccCcCCCCCCcceEEEEEEE----hhHhH
Confidence 4899999999996432212344 23346789999872 33578999999986 55554
No 42
>1tg7_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family GH35, glycopr penicillium, hydrolase; HET: NAG BMA MAN; 1.90A {Penicillium SP} SCOP: b.149.1.1 b.18.1.27 b.18.1.27 b.71.1.5 c.1.8.14 PDB: 1xc6_A*
Probab=62.82 E-value=4.3 Score=48.38 Aligned_cols=71 Identities=20% Similarity=0.174 Sum_probs=43.8
Q ss_pred EEEEEEecCCCCCCcEEEEEEEeccc----CceEEEEEcCCCCCCCCcccccccCCCceeceeeeeeeEEEEEEeecCCe
Q 006927 507 WQIKFKLDSVDQNATYKLRIALATAN----VAELQVRVNDEKAEPPLFATGQIGHDNAIARHGIHGLYRLYSMDVPAANL 582 (625)
Q Consensus 507 w~I~F~L~~~~~~~~~tLriala~a~----~~~~~V~vNg~~~~~p~~~t~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L 582 (625)
.+=.|+|+... .....|.|-+..-. ..+-+|.|||+.+.. ++ ...+-.-.|.||+++|
T Consensus 855 yr~~f~L~~p~-g~d~pl~L~lg~~~~~~~~~~~~~~VNG~~iGr----y~-------------~~~~pqr~y~VP~giL 916 (971)
T 1tg7_A 855 YSTSFDLDLPS-GYDIPLYFNFGNSTSTPAAYRVQLYVNGYQYGK----YV-------------NNIGPQTSFPVPEGIL 916 (971)
T ss_dssp EEEEEECCCCT-TEECCEEEEECCCCSSCCCEEEEEEETTEEEEE----EE-------------TTTCSCCEEEECBTTB
T ss_pred EEEEEeccCCC-CCCceEEEEcCCCCCCCccceEEEEECCEEEee----ec-------------CCCCCCEEEECCHHHh
Confidence 46678876542 12223444332211 148999999986641 10 0111335689999999
Q ss_pred -eeeecEEEEEEec
Q 006927 583 -AAGENTIFLKQAT 595 (625)
Q Consensus 583 -~~G~NtI~l~~~~ 595 (625)
++|.|+|.|++..
T Consensus 917 n~~G~N~i~vrv~~ 930 (971)
T 1tg7_A 917 NYHGTNWLALSLWA 930 (971)
T ss_dssp CTTSEEEEEEEEEE
T ss_pred CcCCccEEEEEEec
Confidence 9999999998755
No 43
>3qva_A Transthyretin-like protein; transthyretin-related protein, 5-hydroxyisourate hydrolase,; HET: PO4; 1.75A {Klebsiella pneumoniae subsp}
Probab=62.54 E-value=14 Score=33.11 Aligned_cols=63 Identities=19% Similarity=0.183 Sum_probs=43.4
Q ss_pred CceEEEEEEEEeccccccCCcccCceEEEecCCCCCCCcccccccceEEEEeCCCcceEe---CcccCCeeEEEEEEcce
Q 006927 313 QRGNISGRLQVQDRYVSDDYITVDGAYVGLAPSGDAGSWQTECKGYQFWTTTDADGFFSI---SDILVGDYNLYAFVPGF 389 (625)
Q Consensus 313 qRGtVsG~v~~~d~~~~~~~~pa~~a~V~La~~g~~g~~q~~~~~yqywt~td~~G~F~I---~nVrpGtY~L~a~~~G~ 389 (625)
+-+.++=+|+-.- .|+||.++.|-|... + ..-.-+.||+||+... ..+.+|.|+|..-
T Consensus 8 ~M~~lstHVLDt~-----~G~PAagv~V~L~~~--------~--~~l~~~~Tn~DGR~~~l~~~~~~~G~Y~L~F~---- 68 (116)
T 3qva_A 8 HMSTLSTHILDIS-----TGTPAEGVTVSLSRE--------G--ETLANLVTNAQGRIATFSAAPLPAGRYCLTAE---- 68 (116)
T ss_dssp -CBCEEEEEEETT-----TTEECTTCEEEEEET--------T--EEEEEEECCTTSEECCSCSSCBCSSEEEEEEC----
T ss_pred ccCCeeeEEeecC-----CCcCCCCCEEEEEEc--------c--EeEEEeccCCCCCccccccccCCCceEEEEEe----
Confidence 3466888876443 389999999999421 1 2234468999998642 4578999999987
Q ss_pred eeeee
Q 006927 390 IGDYR 394 (625)
Q Consensus 390 ~G~~~ 394 (625)
.|+|-
T Consensus 69 tg~Yf 73 (116)
T 3qva_A 69 TGAWF 73 (116)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55544
No 44
>3kpt_A Collagen adhesion protein; intramolecular amide bond, pilin subunit, beta sheet; 2.10A {Bacillus cereus atcc 14579} PDB: 3rkp_A
Probab=60.57 E-value=9.2 Score=40.11 Aligned_cols=47 Identities=19% Similarity=0.240 Sum_probs=33.9
Q ss_pred CCcccCceEEEecCCCCCCCcccccccceEEEEeCCCcceEeCcccCCeeEEEEE
Q 006927 331 DYITVDGAYVGLAPSGDAGSWQTECKGYQFWTTTDADGFFSISDILVGDYNLYAF 385 (625)
Q Consensus 331 ~~~pa~~a~V~La~~g~~g~~q~~~~~yqywt~td~~G~F~I~nVrpGtY~L~a~ 385 (625)
++.+..+|...|.... +...+--..||++|.+.|.++++|+|.|.=-
T Consensus 18 ~~~~L~GA~F~l~~~~--------g~~~~~~~tTd~~G~~~~~~L~~G~Y~~~Et 64 (355)
T 3kpt_A 18 NEKAMAGAVFSLFKKD--------GTEVKKELATDANGHIRVQGLEYGEYYFQET 64 (355)
T ss_dssp GGCBCCSCEEEEEETT--------SCEEEEEEECCTTSEEEEEEEESEEEEEEEE
T ss_pred CCCCcCCcEEEEEECC--------CCEEEEEEEECCCCeEEECCcCCceEEEEEE
Confidence 4678888888884321 1222223468999999999999999998754
No 45
>4hg6_B Cellulose synthase subunit B; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=57.03 E-value=14 Score=42.45 Aligned_cols=77 Identities=21% Similarity=0.208 Sum_probs=52.1
Q ss_pred eEEEEEEecCCCC---CCcEEEEEEEecc----cCceEEEEEcCCCCCCCCcccccccCCCceeceeeeeeeEEEEEEee
Q 006927 506 TWQIKFKLDSVDQ---NATYKLRIALATA----NVAELQVRVNDEKAEPPLFATGQIGHDNAIARHGIHGLYRLYSMDVP 578 (625)
Q Consensus 506 ~w~I~F~L~~~~~---~~~~tLriala~a----~~~~~~V~vNg~~~~~p~~~t~~~~~~~~i~R~~~~G~~~~~~~~ip 578 (625)
.-.|.|.|..+.- .....|.|..+-+ ..+++.|.|||+-+.. ..+.+.. .|....+++.||
T Consensus 319 ~i~V~FrLPPDLfvw~~tga~L~L~YRYSp~l~~~S~L~VsLNgqfV~S-----lPL~~~~-------~g~~~~~~IpLP 386 (707)
T 4hg6_B 319 NRDIDFQLPDDWLLLASQKAQIGIDYGFAGGLPEGALLLVKVNGTTVRM-----LPLDRDA-------APVKPRLDIRFP 386 (707)
T ss_dssp EEEEEEECCSSCCCCSSCEEEEEECEEECSSCCTTCEEEEEETTEEEEE-----EESSSCC-------BSSCCCEEEEEE
T ss_pred CceeEEeCCCCeecccCCCceEEEEEecCCCCCCCCeEEEEECCEEEEE-----EEcCccc-------CCccceeEeecC
Confidence 4688888876652 2346666666554 4589999999985431 1122211 234566999999
Q ss_pred cCCeeeeecEEEEEEe
Q 006927 579 AANLAAGENTIFLKQA 594 (625)
Q Consensus 579 a~~L~~G~NtI~l~~~ 594 (625)
+.+|+.|.|.|.|...
T Consensus 387 p~ll~~g~NqL~FeF~ 402 (707)
T 4hg6_B 387 ARLLHPGPNRLSFESV 402 (707)
T ss_dssp GGGCCSSEEEEEEEEE
T ss_pred HHHcCCCCceEEEEEE
Confidence 9999889999999864
No 46
>3oba_A Beta-galactosidase; TIM barrel, tetramer, GH2, glycosidase, hydrolase; 2.75A {Kluyveromyces lactis} PDB: 3ob8_A
Probab=56.92 E-value=12 Score=44.96 Aligned_cols=42 Identities=12% Similarity=0.150 Sum_probs=37.3
Q ss_pred CceEEEEeCcEEEEECCeEEEEEeCCCeeEEEEEEcCeeccc
Q 006927 4 SSVQLQIQDHHVVMDNGLLQVTISKPDGHVTRIQGYGIDNML 45 (625)
Q Consensus 4 ~~v~l~~~g~~vvldNg~l~vtv~k~~G~vtsl~y~G~enll 45 (625)
..+.+++++..++|.++.++++|+|.+|.++|++++|.+.|.
T Consensus 745 ~~~~~~~~~~~~~v~~~~~~~~f~k~~G~l~s~~~~g~~~l~ 786 (1032)
T 3oba_A 745 KAAKINDGKRYVSVESSGLHFILDKLLGKIESLKVKGKEISS 786 (1032)
T ss_dssp CCCEEEECSSEEEEEETTEEEEEETTTTEEEEEEETTEEEEE
T ss_pred CCcEEEecCCEEEEEECCEEEEEECCcceEEEEEECCEEEec
Confidence 356888999999999999999999999999999999997443
No 47
>3e8v_A Possible transglutaminase-family protein; structural genomics, unknown function, PSI-2, protein structure initiative; 2.40A {Bacteroides fragilis nctc 9343}
Probab=54.95 E-value=54 Score=27.51 Aligned_cols=52 Identities=25% Similarity=0.239 Sum_probs=34.6
Q ss_pred cCCcccCceEEEecCCCCCCCcccccccceEE----EEeCCCcceEeCcccCCeeEEEEEEcceeee
Q 006927 330 DDYITVDGAYVGLAPSGDAGSWQTECKGYQFW----TTTDADGFFSISDILVGDYNLYAFVPGFIGD 392 (625)
Q Consensus 330 ~~~~pa~~a~V~La~~g~~g~~q~~~~~yqyw----t~td~~G~F~I~nVrpGtY~L~a~~~G~~G~ 392 (625)
.+++|+.+|.|-+. +. |. ..|. ..||++|.|++. +=-|+-.+.|.-.|..|+
T Consensus 10 ~~GkPV~gA~Vefe-------~y--Ny-ae~~~~~~~~TD~~G~~s~~-~G~Gd~~v~A~k~G~~g~ 65 (82)
T 3e8v_A 10 AEGQPVADATVEFK-------VY--NY-AEFYTVATKHTDRSGHASLT-AGKGDMLVWASKDGRFGY 65 (82)
T ss_dssp TTSCBCTTCEEEEE-------EE--ET-TEEEEEEEEECCTTSEEEEE-CCSEEEEEEEEETTEEEE
T ss_pred CCCCCCCCCEEEEE-------EE--Ec-hheeEEEEEEECCCceEEEE-EcCCceEEEeccCCEEEE
Confidence 34899999999863 33 22 2233 357999999995 455666666666665553
No 48
>2ww8_A RRGA, cell WALL surface anchor family protein; IGG, pilus, CNA_B, adhesin, integrin, cell adhesion; HET: EPE; 1.90A {Streptococcus pneumoniae}
Probab=54.54 E-value=25 Score=41.55 Aligned_cols=80 Identities=14% Similarity=0.095 Sum_probs=49.1
Q ss_pred ceEEEEEEEEeccccccCCcccCceEEEecCCCCCCCcccccccceEEEEeCCCcceEeCcccCCeeEEEEEE--cceee
Q 006927 314 RGNISGRLQVQDRYVSDDYITVDGAYVGLAPSGDAGSWQTECKGYQFWTTTDADGFFSISDILVGDYNLYAFV--PGFIG 391 (625)
Q Consensus 314 RGtVsG~v~~~d~~~~~~~~pa~~a~V~La~~g~~g~~q~~~~~yqywt~td~~G~F~I~nVrpGtY~L~a~~--~G~~G 391 (625)
.|+|+-+= .| ..+.+..+|..-|.... +..-..-..||++|.+++.+++||+|+|.=-- .|+.-
T Consensus 47 ~G~~~i~K--~d----~~~~~L~GA~F~l~~~~--------~~~~~~~~tTd~~G~~~~~~L~~G~Y~l~Et~AP~GY~l 112 (893)
T 2ww8_A 47 IGKVVIKE--TG----EGGALLGDAVFELKNNT--------DGTTVSQRTEAQTGEAIFSNIKPGTYTLTEAQPPVGYKP 112 (893)
T ss_dssp CEEEEEEE--EC----STTCBCCCCEEEEEETT--------TCCEEEEECCTTTCEEEEEEECSEEEEEEEEECCTTBCC
T ss_pred eEEEEEEE--EC----CCCCccCCCEEEEEECC--------CCeEEEEEEECCCCeEEECCCCCCcEEEEEccCCCceec
Confidence 56666442 23 34688889988875332 11112324589999999999999999998763 34331
Q ss_pred eeeeeeEEEEeCCCcee
Q 006927 392 DYRNDVVLTITEDSDID 408 (625)
Q Consensus 392 ~~~~~~~VtV~aG~t~~ 408 (625)
+ ...-.|+|++...+.
T Consensus 113 ~-~~~~~v~v~~~g~~~ 128 (893)
T 2ww8_A 113 S-TKQWTVEVEKNGRTT 128 (893)
T ss_dssp C-CCEEEEEECTTCCEE
T ss_pred C-CccEEEEECCCceEE
Confidence 1 123347776554433
No 49
>4hg6_B Cellulose synthase subunit B; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=54.14 E-value=9.3 Score=43.77 Aligned_cols=74 Identities=16% Similarity=0.180 Sum_probs=50.5
Q ss_pred eEEEEEEecCCCCCCcEEEEEEEecc-----cCceEEEEEcCCCCCCCCcccccccCCCceeceeeeeeeEEEEEEeecC
Q 006927 506 TWQIKFKLDSVDQNATYKLRIALATA-----NVAELQVRVNDEKAEPPLFATGQIGHDNAIARHGIHGLYRLYSMDVPAA 580 (625)
Q Consensus 506 ~w~I~F~L~~~~~~~~~tLriala~a-----~~~~~~V~vNg~~~~~p~~~t~~~~~~~~i~R~~~~G~~~~~~~~ipa~ 580 (625)
.-.+.|.++.+- ..++|+|..+.+ ..++++|.|||+.+.. -.+..... -...+|+||+
T Consensus 62 ~~~~~f~l~~vV--t~A~L~L~Yt~SPsLlPe~S~LkV~LNge~VGt-----lpl~~~~~---------~~~~~i~Ipp- 124 (707)
T 4hg6_B 62 RAAFRLFLPTEA--VGGTLTLAQRSSIDILPESSQIIVRMNDQEIGR-----FTPRQFGA---------LGAVTMPLGE- 124 (707)
T ss_dssp EEEEEEECSSCC--TTCCBBCEEECSSCCCBTTBEEEEEETTEEEEE-----ECCCCCSS---------CCCBCCCCCS-
T ss_pred ceeEEEEccchh--eeEEEEEEEeeCccccCccceEEEEECCEEEEE-----EecCCCCC---------ceeEEEecCh-
Confidence 467778887733 456677777665 4589999999986542 11222111 2445899998
Q ss_pred CeeeeecEEEEEEecC
Q 006927 581 NLAAGENTIFLKQATS 596 (625)
Q Consensus 581 ~L~~G~NtI~l~~~~g 596 (625)
.|..|.|.|.|.....
T Consensus 125 ~l~~gfN~L~fe~igh 140 (707)
T 4hg6_B 125 AVRAGDNLVTIEAQHR 140 (707)
T ss_dssp SSCSSEEEEEEEEECC
T ss_pred HHcCCcceEEEEEcCC
Confidence 8999999999997653
No 50
>1uy4_A Endo-1,4-beta-xylanase A; carbohydrate-binding module, thermodynamics, protein structure, protein-carbohydrate interactions; HET: XYP; 1.69A {Clostridium stercorarium} SCOP: b.18.1.10 PDB: 1uy1_A* 1uy3_A* 1uy2_A*
Probab=54.13 E-value=59 Score=29.43 Aligned_cols=76 Identities=18% Similarity=0.233 Sum_probs=46.9
Q ss_pred CcEEEEEEEecccCceEEEEEcCCCCCCCCcccccccCCCceeceeeeeeeEEEEEEeecCCeeeeecEEEEEEecCCCC
Q 006927 520 ATYKLRIALATANVAELQVRVNDEKAEPPLFATGQIGHDNAIARHGIHGLYRLYSMDVPAANLAAGENTIFLKQATSSSA 599 (625)
Q Consensus 520 ~~~tLriala~a~~~~~~V~vNg~~~~~p~~~t~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G~NtI~l~~~~g~s~ 599 (625)
+.+++.+-+|++.++.++|++++.... +.-+-.++..-. --.|+..+.+|. +.+|...|+|.. +|
T Consensus 68 G~~~~~~rvas~~gg~ievrlds~~G~--~lgt~~v~~Tgg------w~~w~tv~~~v~---~~~G~h~lyl~f-~g--- 132 (145)
T 1uy4_A 68 GATGFSATVATEVNTSIQIRSDSPTGT--LLGTLYVSSTGS------WNTYNTVSTNIS---KITGVHDIVLVF-SG--- 132 (145)
T ss_dssp CEEEEEEEEECSSCEEEEEEESSTTSC--EEEEEEECCCSS------TTCCEEEEEEEE---EECSEEEEEEEE-SS---
T ss_pred CCEEEEEEEEeCCCcEEEEEECCCCCc--EEEEEEecCCCC------CcccEEEEEEec---CCCceEEEEEEE-eC---
Confidence 566666666666678999999986542 111212222110 114566666664 368999999986 45
Q ss_pred CceEEEEEEEEec
Q 006927 600 VAGVMYDYIRFEG 612 (625)
Q Consensus 600 ~~~vmyD~IrLe~ 612 (625)
.+-.|.++|+.
T Consensus 133 --~~nl~~~~F~~ 143 (145)
T 1uy4_A 133 --PVNVDNFIFSR 143 (145)
T ss_dssp --CCEEEEEEEEE
T ss_pred --CeEEEEEEEEe
Confidence 37888888873
No 51
>1od3_A Putative xylanase; hydrolase, carbohydrate binding module, beta-sandwich, laminaribiose; HET: BGC; 1.0A {Clostridium stercorarium} SCOP: b.18.1.10 PDB: 1nae_A* 1o8s_A* 1o8p_A
Probab=52.58 E-value=65 Score=30.02 Aligned_cols=76 Identities=25% Similarity=0.331 Sum_probs=48.3
Q ss_pred CcEEEEEEEecccCceEEEEEcCCCCCCCCcccccccCCCceeceeeeeeeEEEEEEeecCCeeeeecEEEEEEecCCCC
Q 006927 520 ATYKLRIALATANVAELQVRVNDEKAEPPLFATGQIGHDNAIARHGIHGLYRLYSMDVPAANLAAGENTIFLKQATSSSA 599 (625)
Q Consensus 520 ~~~tLriala~a~~~~~~V~vNg~~~~~p~~~t~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G~NtI~l~~~~g~s~ 599 (625)
+.+++.+-+|++.++.++|++++.+.+ +..+-.++...+ --.|...+.+|+ +.+|...|+|.. .|
T Consensus 90 G~~~~~~rvas~~~G~ievrlds~~G~--~lgt~~vp~Tgg------w~~w~tvt~~v~---~~~G~hdLylvf-~G--- 154 (168)
T 1od3_A 90 GATSVTARVATQNATTIQVRLGSPSGT--LLGTIYVGSTGS------FDTYRDVSATIS---NTAGVKDIVLVF-SG--- 154 (168)
T ss_dssp CEEEEEEEEECSSCEEEEEEESSTTSC--EEEEEEECCCSS------TTCCEEEEEEEE---EECSEEEEEEEE-SS---
T ss_pred CcEEEEEEEEcCCCcEEEEEECCCCCc--EEEEEEeCCCCC------CcccEEEEEEEc---CCCcEEEEEEEE-EC---
Confidence 567777777776678999999986542 111112222110 114666666665 468999999976 45
Q ss_pred CceEEEEEEEEec
Q 006927 600 VAGVMYDYIRFEG 612 (625)
Q Consensus 600 ~~~vmyD~IrLe~ 612 (625)
.+-.|.++++.
T Consensus 155 --~~nldw~~F~~ 165 (168)
T 1od3_A 155 --PVNVDWFVFSK 165 (168)
T ss_dssp --CCEEEEEEEEC
T ss_pred --CcEEEEEEEEe
Confidence 37888888874
No 52
>3uaf_A TTR-52; beta barrel/sandwich, cell engulfment, secreted, protein BIN; 2.01A {Caenorhabditis elegans}
Probab=50.92 E-value=18 Score=32.22 Aligned_cols=47 Identities=19% Similarity=0.233 Sum_probs=30.6
Q ss_pred CceEEEEEEEEeccccccCCcccC--ceEEEecCCCCCCCccc-----ccccceEEEEeCCCcceEeCc
Q 006927 313 QRGNISGRLQVQDRYVSDDYITVD--GAYVGLAPSGDAGSWQT-----ECKGYQFWTTTDADGFFSISD 374 (625)
Q Consensus 313 qRGtVsG~v~~~d~~~~~~~~pa~--~a~V~La~~g~~g~~q~-----~~~~yqywt~td~~G~F~I~n 374 (625)
|--.|+|+|+=. ++||+ ++.|.| |.. +....---+.||++|+|+|..
T Consensus 3 qsV~V~G~L~C~-------~~Pa~~~~V~V~L--------~d~~~~~~d~Ddll~~~~Td~~G~F~l~G 56 (117)
T 3uaf_A 3 SCLMATGVLKCP-------TDPEAVKKVHIDL--------WDAAAAAAESDDLMGRTWSDRNGNFQVTG 56 (117)
T ss_dssp EEEEEEEEEECT-------TCGGGGSSCEEEE--------EEHHHHHTTSCCEEEEEECCTTSEEEEEE
T ss_pred EEEEEEEEEEeC-------CccCCCCCEEEEE--------EecccccCCchHhheeeEECCCCEEEEEE
Confidence 446899999654 48876 678887 431 111222236789999999864
No 53
>2x5p_A FBA2, fibronectin binding protein; protein binding; 1.60A {Streptococcus pyogenes}
Probab=49.59 E-value=24 Score=31.47 Aligned_cols=44 Identities=25% Similarity=0.325 Sum_probs=30.6
Q ss_pred CCcccCceEEEecCCCCCCCcccccccceEEEEeCCCcceEeCcccCCeeEEEEE
Q 006927 331 DYITVDGAYVGLAPSGDAGSWQTECKGYQFWTTTDADGFFSISDILVGDYNLYAF 385 (625)
Q Consensus 331 ~~~pa~~a~V~La~~g~~g~~q~~~~~yqywt~td~~G~F~I~nVrpGtY~L~a~ 385 (625)
++.+..+|..-|.... ++-.+=|+ ++|.+.|.+++||+|.|.=-
T Consensus 38 ~g~~L~GA~F~l~~~~--------g~~v~~~~---sdG~~~~~~L~~G~Y~l~Et 81 (121)
T 2x5p_A 38 DGKELAGATMELRDSS--------GKTISTWI---SDGQVKDFYLMPGKYTFVET 81 (121)
T ss_dssp TCCBCCCCEEEEECTT--------SCEEEEEE---CCSSCEEEEECSEEEEEEEE
T ss_pred CCCCcCCCEEEEEECC--------CCEEEEEE---eCCEEEEcccCCcEEEEEEE
Confidence 3577888888775321 12223354 47999999999999999754
No 54
>3iwv_A 5-hydroxyisourate hydrolase; transthyretin, molecular evolution, URIC acid degradation, T hormones, peroxisome, purine metabolism; 1.68A {Danio rerio} PDB: 3iwu_A 3q1e_A 2h6u_A 2h1x_A
Probab=49.48 E-value=7.6 Score=35.76 Aligned_cols=68 Identities=16% Similarity=0.197 Sum_probs=44.8
Q ss_pred CceEEEEEEEEeccccccCCcccCceEEEecCCCC-CCCcccccccceEEEEeCCCcceE--e--CcccCCeeEEEEEEc
Q 006927 313 QRGNISGRLQVQDRYVSDDYITVDGAYVGLAPSGD-AGSWQTECKGYQFWTTTDADGFFS--I--SDILVGDYNLYAFVP 387 (625)
Q Consensus 313 qRGtVsG~v~~~d~~~~~~~~pa~~a~V~La~~g~-~g~~q~~~~~yqywt~td~~G~F~--I--~nVrpGtY~L~a~~~ 387 (625)
.++.++=.|+-.- .|+||.++.|-|..... .+.|. .-.-+.||+||+.. + ..+.+|+|+|..-
T Consensus 24 ~~~~LTtHVLDt~-----~G~PAagv~V~L~~~~~~~~~w~-----~l~~~~Tn~DGR~~~ll~~~~~~~G~Y~L~F~-- 91 (138)
T 3iwv_A 24 LLSPLSTHVLNIA-----QGVPGANMTIVLHRLDPVSSAWN-----ILTTGITNDDGRCPGLITKENFIAGVYKMRFE-- 91 (138)
T ss_dssp --CCEECCEEETT-----TTEECTTCEEEEEEECSSSCCEE-----EEEEEECCTTSCCTTSSCTTTCCSEEEEEEEC--
T ss_pred CCCCceEEEeecC-----CccCCCCCEEEEEEECCCCCCcE-----EEEEEecCCCCCcCCccCcccCCCceEEEEEe--
Confidence 3577888876443 38999999999964321 12343 12336799999864 2 3578999999987
Q ss_pred ceeeeee
Q 006927 388 GFIGDYR 394 (625)
Q Consensus 388 G~~G~~~ 394 (625)
.|+|-
T Consensus 92 --tg~Yf 96 (138)
T 3iwv_A 92 --TGKYW 96 (138)
T ss_dssp --HHHHH
T ss_pred --hHHHH
Confidence 55554
No 55
>1yua_A Topoisomerase I; gene-regulating protein, DNA binding protein; NMR {Escherichia coli} SCOP: g.41.3.3 g.41.3.3
Probab=48.88 E-value=8.8 Score=34.09 Aligned_cols=18 Identities=17% Similarity=0.401 Sum_probs=16.9
Q ss_pred eeEEEEEeCCcceeEEEE
Q 006927 112 IDKRYIMLGNTSGFYSYA 129 (625)
Q Consensus 112 l~~~~v~r~g~sgiY~y~ 129 (625)
.|-|||||+|-+|+++.+
T Consensus 23 ~d~~fVLRDGAsGlFlAA 40 (122)
T 1yua_A 23 SDAYFVLRDGAAGVFLAA 40 (122)
T ss_dssp SSCEEEEECCSSSCEEEE
T ss_pred cCCEEEeeCCchhhhhhh
Confidence 489999999999999998
No 56
>3fn9_A Putative beta-galactosidase; structural genomics, glycosidas hydrolase, PSI-2, protein structure initiative; 2.70A {Bacteroides fragilis}
Probab=48.85 E-value=14 Score=42.21 Aligned_cols=70 Identities=21% Similarity=0.186 Sum_probs=47.8
Q ss_pred eeEEEEEEecCCCCCCcEEEEEEEecccCceEEEEEcCCCCCCCCcccccccCCCceeceeeeeeeEEEEEEeecCCeee
Q 006927 505 TTWQIKFKLDSVDQNATYKLRIALATANVAELQVRVNDEKAEPPLFATGQIGHDNAIARHGIHGLYRLYSMDVPAANLAA 584 (625)
Q Consensus 505 ~~w~I~F~L~~~~~~~~~tLriala~a~~~~~~V~vNg~~~~~p~~~t~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~ 584 (625)
...+=.|.+++........|++.. ......|.|||+.+.. -.|-+..++|+|+ ..|+.
T Consensus 62 ~wYr~~f~~p~~~~~~~~~L~f~g---v~~~a~V~vNG~~vg~------------------~~~g~~~f~~dIt-~~l~~ 119 (692)
T 3fn9_A 62 GYYRKTQFFPHDLEGKRVFLRFEG---VGACAEVYVNGKLAGT------------------HKGGYSAFACEIG-TALKL 119 (692)
T ss_dssp EEEEEEEEECGGGTTCEEEEEESC---CBSEEEEEETTEEEEE------------------EECTTSCEEEECG-GGCCT
T ss_pred EEEEEEEEECchhCCCeEEEEECC---ccEeeEEEECCEEeee------------------EcCCcceEEEECh-HhcCC
Confidence 345667998765433345555543 3467789999985420 1244567899998 78899
Q ss_pred e-ecEEEEEEecC
Q 006927 585 G-ENTIFLKQATS 596 (625)
Q Consensus 585 G-~NtI~l~~~~g 596 (625)
| +|+|.+.+.+.
T Consensus 120 G~~N~l~V~v~~~ 132 (692)
T 3fn9_A 120 GAENEIIVKADNK 132 (692)
T ss_dssp TEEEEEEEEEECC
T ss_pred CCceEEEEEEECC
Confidence 8 89999999764
No 57
>2h0e_A Transthyretin-like protein PUCM; beta sandwitch, hydrolase, HIU; 2.20A {Bacillus subtilis} PDB: 2h0f_A* 2h0j_A*
Probab=48.68 E-value=9 Score=34.48 Aligned_cols=63 Identities=19% Similarity=0.224 Sum_probs=43.3
Q ss_pred eEEEEEEEEeccccccCCcccCceEEEecCCCCCCCcccccccceEEEEeCCCcceE-----eCcccCCeeEEEEEEcce
Q 006927 315 GNISGRLQVQDRYVSDDYITVDGAYVGLAPSGDAGSWQTECKGYQFWTTTDADGFFS-----ISDILVGDYNLYAFVPGF 389 (625)
Q Consensus 315 GtVsG~v~~~d~~~~~~~~pa~~a~V~La~~g~~g~~q~~~~~yqywt~td~~G~F~-----I~nVrpGtY~L~a~~~G~ 389 (625)
+.++=+|+-.- .|+||.++.|-|.... |+ ...-+.||+||+.. -..+++|.|+|..-
T Consensus 9 ~~lstHVLDt~-----~G~PAagv~V~L~~~~----~~-----~l~~~~Tn~DGR~~~~~~~~~~~~~G~Y~l~F~---- 70 (121)
T 2h0e_A 9 GKLTTHILDLT-----CGKPAANVKIGLKRLG----ES-----IMKEVYTNNDGRVDVPLLAGEELMSGEYVMEFH---- 70 (121)
T ss_dssp CEEECCEEETT-----TTEECTTCEEEEEETT----SC-----CCEEEECCTTSSCSSCSEEGGGCCSEEEEEEEC----
T ss_pred CCeeEEEecCC-----CcCCCCCCEEEEEECC----ce-----EEEEEecCCCCCccCCcCCCCCcCceEEEEEEE----
Confidence 45666665332 4899999999995321 33 23457799999863 33688999999986
Q ss_pred eeeeee
Q 006927 390 IGDYRN 395 (625)
Q Consensus 390 ~G~~~~ 395 (625)
.|+|-.
T Consensus 71 tg~Yf~ 76 (121)
T 2h0e_A 71 AGDYFA 76 (121)
T ss_dssp HHHHHH
T ss_pred hHHhHh
Confidence 565543
No 58
>2vzs_A CSXA, EXO-beta-D-glucosaminidase; hydrolase, GH2, glucosamine, glycoside hydrolase; HET: GCS; 1.85A {Amycolatopsis orientalis} SCOP: b.1.4.1 b.1.4.1 b.1.4.1 b.18.1.5 c.1.8.3 PDB: 2x05_A* 2x09_A* 2vzo_A 2vzt_A* 2vzv_A* 2vzu_A*
Probab=48.66 E-value=3.7 Score=49.20 Aligned_cols=85 Identities=22% Similarity=0.295 Sum_probs=0.0
Q ss_pred EEEEEecCCCCCCcEEEEEEEeccc--CceEEEEEcCCCC-CCCCcccccccCCCceeceeeeeeeEEEEEEeecCCeee
Q 006927 508 QIKFKLDSVDQNATYKLRIALATAN--VAELQVRVNDEKA-EPPLFATGQIGHDNAIARHGIHGLYRLYSMDVPAANLAA 584 (625)
Q Consensus 508 ~I~F~L~~~~~~~~~tLriala~a~--~~~~~V~vNg~~~-~~p~~~t~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~ 584 (625)
.|.|++. ++..|.|+|.|-.|... ...+.|.|||... .. ..++... +.. .+...++.| .|++
T Consensus 945 ~v~~~V~-v~~aG~Y~l~iryan~~~~~r~~~l~VNG~~~~~~-----v~~~~Tg-----~W~-~w~~~~~~v---~L~a 1009 (1032)
T 2vzs_A 945 SVEWTVT-VPSAGTYDVVVRYANGTTTSRPLDFSVNGSISASG-----VAFGSTG-----TWP-AWTTKTVRV---TLAA 1009 (1032)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEEEEE-CCCCeEEEEEEEEEcCCCCCeeEEEEECCeEeeeE-----EEecCCC-----CCC-ccEEEEEEE---EECC
Confidence 3556654 34458999999888753 4578999999753 11 0111110 110 133333333 3899
Q ss_pred eecEEEEEEecCCCCCceEEEEEEEE
Q 006927 585 GENTIFLKQATSSSAVAGVMYDYIRF 610 (625)
Q Consensus 585 G~NtI~l~~~~g~s~~~~vmyD~IrL 610 (625)
|.|+|.|....+. -++=.|+|.+
T Consensus 1010 G~NtI~~~~~~~~---g~~niD~i~v 1032 (1032)
T 2vzs_A 1010 GVNKIKAVATTAN---GGPNVDKITL 1032 (1032)
T ss_dssp --------------------------
T ss_pred CceEEEEEEcCCc---CceEEEEEEC
Confidence 9999999864221 1466677654
No 59
>2pz4_A Protein GBS052; SPAB, GRAM-positive pilins, adhesions, IGG-like domain, cell adhesion; 1.80A {Streptococcus agalactiae} PDB: 3phs_A
Probab=47.91 E-value=15 Score=36.25 Aligned_cols=26 Identities=27% Similarity=0.276 Sum_probs=22.0
Q ss_pred EEEEeCCCcceEeCcccCCeeEEEEE
Q 006927 360 FWTTTDADGFFSISDILVGDYNLYAF 385 (625)
Q Consensus 360 ywt~td~~G~F~I~nVrpGtY~L~a~ 385 (625)
.-..||++|.++|.++++|+|.|.=.
T Consensus 70 ~~~tTd~~G~~~~~~L~~G~Y~v~Et 95 (239)
T 2pz4_A 70 FEATTNQQGKATFNQLPDGIYYGLAV 95 (239)
T ss_dssp EEEECCTTSEEEEEEEESEEEEEEEE
T ss_pred eEEEECCCCeEEECCCCCeeEEEEEE
Confidence 34568999999999999999998654
No 60
>3d3a_A Beta-galactosidase; protein structure initiative II, PSI II, NYSGXRC, 11092F, structural genomics; 2.15A {Bacteroides thetaiotaomicron vpi-5482}
Probab=41.59 E-value=32 Score=38.81 Aligned_cols=68 Identities=26% Similarity=0.343 Sum_probs=44.4
Q ss_pred ceeEEEEEEecCCCCCCcEEEEEEEecccCceEEEEEcCCCCCCCCcccccccCCCceeceeeeeeeEEEEEEeecCCee
Q 006927 504 ATTWQIKFKLDSVDQNATYKLRIALATANVAELQVRVNDEKAEPPLFATGQIGHDNAIARHGIHGLYRLYSMDVPAANLA 583 (625)
Q Consensus 504 ~~~w~I~F~L~~~~~~~~~tLriala~a~~~~~~V~vNg~~~~~p~~~t~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~ 583 (625)
++=.+-.|+++.. +. .+|-...-+.=+|.|||+.+.. -|.++- ..++| ||+++|+
T Consensus 508 p~~yk~~f~~~~~---~D----t~Ld~~g~gKG~vwVNG~nlGR----YW~~GP-----------qqtlY---vP~~~Lk 562 (612)
T 3d3a_A 508 PAYYRSTFNLNEL---GD----TFLNMMNWSKGMVWVNGHAIGR----YWEIGP-----------QQTLY---VPGCWLK 562 (612)
T ss_dssp CEEEEEEEEESSC---CB----EEEECTTCCEEEEEETTEEEEE----EETTCS-----------CCEEE---ECGGGCC
T ss_pred CEEEEEEEECCCC---Cc----EEEecCCCCcEEEEECCEeEEe----EEecCC-----------EEEEE---ecHHHcC
Confidence 4556777888542 22 3344456678899999998763 232321 23444 9999999
Q ss_pred eeecEEEEEEecC
Q 006927 584 AGENTIFLKQATS 596 (625)
Q Consensus 584 ~G~NtI~l~~~~g 596 (625)
+|.|+|.|==..+
T Consensus 563 ~g~N~ivvfE~~~ 575 (612)
T 3d3a_A 563 KGENEIIILDMAG 575 (612)
T ss_dssp SEEEEEEEEESSC
T ss_pred CCCcEEEEEEEcC
Confidence 9999987755544
No 61
>3cmg_A Putative beta-galactosidase; structural genomics, PSI-2, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.90A {Bacteroides fragilis}
Probab=41.32 E-value=24 Score=39.93 Aligned_cols=69 Identities=12% Similarity=0.197 Sum_probs=46.5
Q ss_pred eeEEEEEEecCCCCCCcEEEEEEEecccCceEEEEEcCCCCCCCCcccccccCCCceeceeeeeeeEEEEEEeecCCeee
Q 006927 505 TTWQIKFKLDSVDQNATYKLRIALATANVAELQVRVNDEKAEPPLFATGQIGHDNAIARHGIHGLYRLYSMDVPAANLAA 584 (625)
Q Consensus 505 ~~w~I~F~L~~~~~~~~~tLriala~a~~~~~~V~vNg~~~~~p~~~t~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~ 584 (625)
...+=.|.+++........|++..+ .....|.|||+.+. . -.|-+..++|+|.. .|+.
T Consensus 51 ~wYr~~f~~p~~~~~~~~~L~f~gv---~~~a~V~vNG~~vg----------------~--~~~~~~~~~~dit~-~l~~ 108 (667)
T 3cmg_A 51 GNYEKALYIRPEWKGKRLFLRFDGV---NSIADVFINRKHIG----------------E--HRGGYGAFIFEITD-LVKY 108 (667)
T ss_dssp EEEEEEEECCGGGTTSEEEEEESCC---BSEEEEEETTEEEE----------------E--EECSSSCEEEECTT-TSCT
T ss_pred EEEEEEEECCcccCCCEEEEEECCc---cceeEEEECCEEEe----------------e--ecCCcccEEEECCH-HHCC
Confidence 4456679987643323345555433 45678999998542 1 12445678899986 7888
Q ss_pred e-ecEEEEEEec
Q 006927 585 G-ENTIFLKQAT 595 (625)
Q Consensus 585 G-~NtI~l~~~~ 595 (625)
| +|+|.+.+.+
T Consensus 109 G~~N~l~V~v~~ 120 (667)
T 3cmg_A 109 GEKNSVLVRANN 120 (667)
T ss_dssp TSEEEEEEEEEC
T ss_pred CCCcEEEEEEec
Confidence 8 8999999865
No 62
>3c7f_A Xylanase D, endo-1,4-beta-xylanase; 5-bladed beta-propeller fold, beta-sandwich, xylan degradati hydrolase; HET: XYP; 1.55A {Bacillus subtilis} PDB: 3c7e_A* 3c7h_A* 3c7o_A* 3c7g_A*
Probab=40.86 E-value=1.1e+02 Score=32.77 Aligned_cols=80 Identities=16% Similarity=0.289 Sum_probs=47.1
Q ss_pred CcEEEEEEEecccCceEEEEEcCCCCCCCCcccccccCCCceeceeeeeeeEEEEEEeecCCeeeeecEEEEEEecCCCC
Q 006927 520 ATYKLRIALATANVAELQVRVNDEKAEPPLFATGQIGHDNAIARHGIHGLYRLYSMDVPAANLAAGENTIFLKQATSSSA 599 (625)
Q Consensus 520 ~~~tLriala~a~~~~~~V~vNg~~~~~p~~~t~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G~NtI~l~~~~g~s~ 599 (625)
+.++|++-+|+.+++.++|++++.+.. +.-+-.++...+ --.|+..+.+| .. .+|.+.|+|....+. .
T Consensus 406 g~~~~~~~vas~~~g~ievr~~s~~G~--~~g~~~v~~tgg------~~~w~~~~~~v--~~-~~G~h~ly~~f~g~~-~ 473 (487)
T 3c7f_A 406 GARSFKANVASTLGGKIEVRLDSADGK--LVGTLNVPSTGG------AQTWREIETAV--SG-ATGVHKVFFVFTGTG-T 473 (487)
T ss_dssp CEEEEEEEEEESSCEEEEEEESSTTSC--EEEEEEECCCSE------EEEEEEEEEEC--CS-CCSEEEEEEEEECSC-S
T ss_pred CccEEEEEEEeCCCcEEEEEECCCCCc--EEEEEEeCCCCC------CcccEEEEEEE--cC-CCceEEEEEEEECCC-C
Confidence 566666666667788999999876543 111212222111 12345555555 33 589999999875542 1
Q ss_pred CceEEEEEEEEe
Q 006927 600 VAGVMYDYIRFE 611 (625)
Q Consensus 600 ~~~vmyD~IrLe 611 (625)
-.-+-+|.++++
T Consensus 474 ~~l~~~~~~~f~ 485 (487)
T 3c7f_A 474 GNLFNFDYWQFT 485 (487)
T ss_dssp SCCCEEEEEEEE
T ss_pred cceEEEEEEEEE
Confidence 123677888876
No 63
>3lpf_A Beta-glucuronidase; alpha/beta barrel, sugar-binding domain, beta-sandwich domai glycosyl hydrolase, glycosida hydrolase; HET: Z77; 2.26A {Escherichia coli} PDB: 3k46_A* 3k4d_A* 3lpg_A* 3k4a_A
Probab=40.04 E-value=30 Score=38.77 Aligned_cols=67 Identities=19% Similarity=0.178 Sum_probs=44.5
Q ss_pred EEEEEEecCCCCCCcEEEEEEEecccCceEEEEEcCCCCCCCCcccccccCCCceeceeeeeeeEEEEEEeecCCeeeee
Q 006927 507 WQIKFKLDSVDQNATYKLRIALATANVAELQVRVNDEKAEPPLFATGQIGHDNAIARHGIHGLYRLYSMDVPAANLAAGE 586 (625)
Q Consensus 507 w~I~F~L~~~~~~~~~tLriala~a~~~~~~V~vNg~~~~~p~~~t~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G~ 586 (625)
.+-.|.+++........|++.. ......|.|||+.+. . -.|-+..++|+|+ ..|+.|+
T Consensus 71 Y~~~f~~p~~~~~~~~~L~f~g---v~~~a~V~vNG~~vg----------------~--~~~~~~p~~~dit-~~l~~G~ 128 (605)
T 3lpf_A 71 YQREVFIPKGWAGQRIVLRFDA---VTHYGKVWVNNQEVM----------------E--HQGGYTPFEADVT-PYVIAGK 128 (605)
T ss_dssp EEEEEECCTTCSSCEEEEEESC---CBSEEEEEESSCEEE----------------E--ECCSSSCEEEECG-GGCCTTS
T ss_pred EEEEEECCcccCCCEEEEEECC---cceEEEEEECCEEEE----------------E--EcCCCCcceeech-hhccCCC
Confidence 5567888765433344555543 346678999998542 0 1244567889998 7888998
Q ss_pred c-EEEEEEec
Q 006927 587 N-TIFLKQAT 595 (625)
Q Consensus 587 N-tI~l~~~~ 595 (625)
| +|++.+.+
T Consensus 129 nn~l~V~v~n 138 (605)
T 3lpf_A 129 SVRITVCVNN 138 (605)
T ss_dssp EEEEEEEEEC
T ss_pred eEEEEEEEec
Confidence 6 89998843
No 64
>4fxt_A Uncharacterized protein; PF12866 family, DUF3823, structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.77A {Bacteroides ovatus}
Probab=37.53 E-value=1.2e+02 Score=29.44 Aligned_cols=64 Identities=20% Similarity=0.330 Sum_probs=41.0
Q ss_pred ceEEEEEEEEeccccccCCcccCceEEEecCCCCCCCcccccccceEEEEeCCCcceEeCcccCCeeEEEEEEcc
Q 006927 314 RGNISGRLQVQDRYVSDDYITVDGAYVGLAPSGDAGSWQTECKGYQFWTTTDADGFFSISDILVGDYNLYAFVPG 388 (625)
Q Consensus 314 RGtVsG~v~~~d~~~~~~~~pa~~a~V~La~~g~~g~~q~~~~~yqywt~td~~G~F~I~nVrpGtY~L~a~~~G 388 (625)
-++++|+|.-.+.-+. ....++-+-|-+.+ |. ..+-|.+. ...||.|+ ..+=.|+|.|..--.|
T Consensus 7 ~a~l~G~iv~tgE~i~---~~~~gv~i~l~e~g----~~--~~~~~~~~-v~qDGtf~-~~lF~G~Yki~~~~nG 70 (202)
T 4fxt_A 7 KATLTGKAIYDGEAVG---VRSGSSEFALFQDG----YA--LKGSIPVY-IAQDGSYS-VSLFNGDYKLVRMGNA 70 (202)
T ss_dssp EEEEEEEEEETTEECB---CCTTTEEEEEECCC----------CCEEEE-BCTTSEEE-EEEESEEEEEEEEETC
T ss_pred CceEEEEEEECCCEee---ecCCceEEEEEEcc----cC--CCCCeeEE-EcCCCcEE-EEEEcceeEEEECCCC
Confidence 4789999974332222 23456777775554 54 23445553 78899999 8999999999954445
No 65
>1yq2_A Beta-galactosidase; glycosyl hydrolase family 2, TIM barrel, hexamer; 1.90A {Arthrobacter SP} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3
Probab=37.40 E-value=28 Score=41.68 Aligned_cols=68 Identities=21% Similarity=0.246 Sum_probs=45.4
Q ss_pred eEEEEEEecCCC--CC-CcEEEEEEEecccCceEEEEEcCCCCCCCCcccccccCCCceeceeeeeeeEEEEEEeecCCe
Q 006927 506 TWQIKFKLDSVD--QN-ATYKLRIALATANVAELQVRVNDEKAEPPLFATGQIGHDNAIARHGIHGLYRLYSMDVPAANL 582 (625)
Q Consensus 506 ~w~I~F~L~~~~--~~-~~~tLriala~a~~~~~~V~vNg~~~~~p~~~t~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L 582 (625)
..+=.|++++.. .. ....|++..+ .....|.|||+.+.. -.|-+..++|+|. ..|
T Consensus 121 wYrr~F~vp~~~~~~g~~rv~L~F~gv---~~~a~V~vNG~~VG~------------------~~gg~~p~~~DIT-~~L 178 (1024)
T 1yq2_A 121 DFRRRFDVPAQWFESTTAALTLRFDGV---ESRYKVWVNGQEIGV------------------GSGSRLAQEFDVS-DAL 178 (1024)
T ss_dssp EEEEEEEECGGGGSTTEEEEEEEESCE---ESCEEEEETTEEEEE------------------ECCTTSCEEEECT-TTC
T ss_pred EEEEEeEECchHhcCCCceEEEEECCC---CceEEEEECCEEEEE------------------EeCCccceEEecH-Hhc
Confidence 456679987654 22 2344555433 345789999985420 1244567889997 688
Q ss_pred eeeecEEEEEEec
Q 006927 583 AAGENTIFLKQAT 595 (625)
Q Consensus 583 ~~G~NtI~l~~~~ 595 (625)
+.|+|+|.+.+.+
T Consensus 179 k~G~N~L~V~V~~ 191 (1024)
T 1yq2_A 179 RAGSNLLVVRVHQ 191 (1024)
T ss_dssp CSEEEEEEEEEES
T ss_pred cCCCcEEEEEEEe
Confidence 9999999999964
No 66
>3bga_A Beta-galactosidase; NYSGXRC, protein structure initiative II (PSI-II), glycosyl hydrolase family 2, jelly-roll fold; 2.10A {Bacteroides thetaiotaomicron vpi-5482} PDB: 3dec_A
Probab=36.75 E-value=29 Score=41.50 Aligned_cols=68 Identities=19% Similarity=0.148 Sum_probs=46.1
Q ss_pred eEEEEEEecCCCCCCcEEEEEEEecccCceEEEEEcCCCCCCCCcccccccCCCceeceeeeeeeEEEEEEeecCCeeee
Q 006927 506 TWQIKFKLDSVDQNATYKLRIALATANVAELQVRVNDEKAEPPLFATGQIGHDNAIARHGIHGLYRLYSMDVPAANLAAG 585 (625)
Q Consensus 506 ~w~I~F~L~~~~~~~~~tLriala~a~~~~~~V~vNg~~~~~p~~~t~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G 585 (625)
..+=.|.+++........|++..+ .....|.|||+.+. . -.|-+..++|+|.. .|+.|
T Consensus 129 ~Yrr~F~vp~~~~g~~v~L~F~gv---~~~a~V~vNG~~vG----------------~--~~gg~~p~~~DIT~-~L~~G 186 (1010)
T 3bga_A 129 SYRRTFKVPADWKGRRVVLCCEGV---ISFYYVWVNGKLLG----------------Y--NQGSKTAAEWDITD-VLSEG 186 (1010)
T ss_dssp EEEEEEECCGGGTTSEEEEEESCE---ESEEEEEETTEEEE----------------E--EECSSSCEEEECGG-GCCSS
T ss_pred EEEEEeEeCcccCCCEEEEEECCC---CceeEEEECCEEEe----------------e--EeCCCCcceeehhh-hccCC
Confidence 355678887654323355555443 44678999998542 0 12446678999984 78999
Q ss_pred ecEEEEEEec
Q 006927 586 ENTIFLKQAT 595 (625)
Q Consensus 586 ~NtI~l~~~~ 595 (625)
+|+|.+.+.+
T Consensus 187 ~N~L~V~V~~ 196 (1010)
T 3bga_A 187 ENVVALEVYR 196 (1010)
T ss_dssp EEEEEEEEES
T ss_pred CcEEEEEEEe
Confidence 9999999964
No 67
>3gm8_A Glycoside hydrolase family 2, candidate beta-GLYC; structural genomics, glycosidase, PSI-2, protein initiative; 2.40A {Bacteroides vulgatus}
Probab=34.64 E-value=37 Score=39.57 Aligned_cols=68 Identities=19% Similarity=0.190 Sum_probs=45.6
Q ss_pred EEEEEEecCCCCCCcEEEEEEEecccCceEEEEEcCCCCCCCCcccccccCCCceeceeeeeeeEEEEEEeecCCeeeee
Q 006927 507 WQIKFKLDSVDQNATYKLRIALATANVAELQVRVNDEKAEPPLFATGQIGHDNAIARHGIHGLYRLYSMDVPAANLAAGE 586 (625)
Q Consensus 507 w~I~F~L~~~~~~~~~tLriala~a~~~~~~V~vNg~~~~~p~~~t~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G~ 586 (625)
.+=.|.+++........|++.. ......|.|||+.+. . -.|-+..++|+|+. .|+.|+
T Consensus 70 Yrk~f~vp~~~~~~~v~L~f~g---v~~~a~V~vNG~~vG----------~--------~~~g~~pf~~DIT~-~Lk~G~ 127 (801)
T 3gm8_A 70 YRKTFTIPSKWKNKKVQILFEG---VYLNSEVWINGHWLG----------K--------RPNGYISFVYDLTP-YLQEGK 127 (801)
T ss_dssp EEEEEECCSGGGSCEEEEEESC---CBSCEEEEETTEEEE----------E--------ECCSSCCEEEECGG-GCCSSE
T ss_pred EEEEEEcCcccCCCEEEEEECc---cceEEEEEECCEEee----------c--------ccCCcccEEEECcH-hccCCC
Confidence 5567888765433344555543 345678999998542 1 11345678899976 578999
Q ss_pred cEEEEEEecC
Q 006927 587 NTIFLKQATS 596 (625)
Q Consensus 587 NtI~l~~~~g 596 (625)
|+|.+.+.+.
T Consensus 128 N~L~V~V~n~ 137 (801)
T 3gm8_A 128 NQIAVKVDHS 137 (801)
T ss_dssp EEEEEEEEEC
T ss_pred cEEEEEEECC
Confidence 9999998653
No 68
>2pz4_A Protein GBS052; SPAB, GRAM-positive pilins, adhesions, IGG-like domain, cell adhesion; 1.80A {Streptococcus agalactiae} PDB: 3phs_A
Probab=34.43 E-value=14 Score=36.30 Aligned_cols=45 Identities=27% Similarity=0.450 Sum_probs=32.2
Q ss_pred EeCCCcceEeCcccCCeeEEEEE-Ecceeeeee--eeeEEEEeCCCceec
Q 006927 363 TTDADGFFSISDILVGDYNLYAF-VPGFIGDYR--NDVVLTITEDSDIDM 409 (625)
Q Consensus 363 ~td~~G~F~I~nVrpGtY~L~a~-~~G~~G~~~--~~~~VtV~aG~t~~l 409 (625)
.+|++|.|.|.++++|+|.|.=- +| .|... ..-.++|++++++.+
T Consensus 177 ~Td~~G~~~~~~L~~G~Y~l~EtkAP--~GY~l~~~~~~f~i~~~~~~~~ 224 (239)
T 2pz4_A 177 ETDSSGHIRISGLIHGDYVLKEIETQ--SGYQIGQAETAVTIEKSKTVTV 224 (239)
T ss_dssp ECCTTSEEEEEEEESEEEEEEEEECC--TTBCCCCSEEEEEECTTSEEEE
T ss_pred EECCCCeEEECCCCCceEEEEEEECC--CCcCcCCccEEEEEeCCCeEEE
Confidence 48999999999999999997654 43 23222 234688888876544
No 69
>1jz7_A Lactase, beta-galactosidase, LACZ; TIM barrel (alpha/beta barrel), jelly-roll barrel, immunoglobulin, beta supersandwich, hydrolase; HET: GAL; 1.50A {Escherichia coli} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3 PDB: 1hn1_A 1jyx_A* 1jz3_A* 1jz4_A* 1jz5_A* 1jz6_A* 1dp0_A* 3iap_A* 1jz8_A* 1jyn_A* 1jyv_A* 1jyw_A* 3iaq_A* 1px3_A 1px4_A* 3czj_A* 3i3e_A 3i3d_A* 3i3b_A 3dym_A ...
Probab=34.06 E-value=35 Score=40.88 Aligned_cols=38 Identities=11% Similarity=0.191 Sum_probs=33.9
Q ss_pred EEEeCcEEEEECCeEEEEEeCCCeeEEEEEEcCeeccc
Q 006927 8 LQIQDHHVVMDNGLLQVTISKPDGHVTRIQGYGIDNML 45 (625)
Q Consensus 8 l~~~g~~vvldNg~l~vtv~k~~G~vtsl~y~G~enll 45 (625)
+++++..++|.++.++++|+|.+|.++|++++|++.|.
T Consensus 740 ~~~~~~~~~v~~~~~~~~f~~~~G~l~s~~~~g~~~l~ 777 (1023)
T 1jz7_A 740 LTTSEMDFCIELGNKRWQFNRQSGFLSQMWIGDKKQLL 777 (1023)
T ss_dssp EEECSSEEEEEETTEEEEEETTTCSEEEEEETTEECEE
T ss_pred ceecCceEEEEECCEEEEEECCcceEEEEEECCEEeec
Confidence 66788899999999999999999999999999997443
No 70
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=34.01 E-value=42 Score=37.81 Aligned_cols=26 Identities=19% Similarity=0.438 Sum_probs=23.4
Q ss_pred EEEeCCCcceEeCcccCCeeEEEEEE
Q 006927 361 WTTTDADGFFSISDILVGDYNLYAFV 386 (625)
Q Consensus 361 wt~td~~G~F~I~nVrpGtY~L~a~~ 386 (625)
|..+.....-+..|++||+|+|.|-+
T Consensus 731 W~~~~~~~~~~ytnL~pG~Y~f~V~a 756 (781)
T 3v9f_A 731 WYTINEQNSVTFRNIPPGKYEFLVKA 756 (781)
T ss_dssp EEEESSCSEEEECSCCSEEEEEEEEE
T ss_pred ccCcCCcceEEEcCCCCceEEEEEEE
Confidence 77888778899999999999999986
No 71
>2je8_A Beta-mannosidase; glycoside hydrolase, hydrolase; HET: B3P; 1.7A {Bacteroides thetaiotaomicron} SCOP: b.1.4.1 b.1.4.1 b.1.4.1 b.18.1.5 c.1.8.3 PDB: 2vr4_A* 2vl4_A* 2vmf_A* 2vo5_A* 2vot_A* 2vqt_A* 2vjx_A* 2vqu_A* 2wbk_A*
Probab=33.83 E-value=33 Score=40.08 Aligned_cols=66 Identities=15% Similarity=0.205 Sum_probs=44.5
Q ss_pred EEEEEEecCCC-CCCcEEEEEEEecccCceEEEEEcCCCCCCCCcccccccCCCceeceeeeeeeEEEEEEeecCCeeee
Q 006927 507 WQIKFKLDSVD-QNATYKLRIALATANVAELQVRVNDEKAEPPLFATGQIGHDNAIARHGIHGLYRLYSMDVPAANLAAG 585 (625)
Q Consensus 507 w~I~F~L~~~~-~~~~~tLriala~a~~~~~~V~vNg~~~~~p~~~t~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G 585 (625)
.+=.|.+++.. ......|++.. ....-.|.|||+.+. . -.|-+..++|+|+. .|+.|
T Consensus 68 Yr~~f~~p~~~~~~~~~~L~f~g---v~~~a~V~vNG~~vg----------~--------~~~~~~~~~~dIt~-~l~~G 125 (848)
T 2je8_A 68 YRTSFIVSEEQLNRDGIQLIFEG---LDTYADVYLNGSLLL----------K--------ADNMFVGYTLPVKS-VLRKG 125 (848)
T ss_dssp EEEEEEECHHHHTSSEEEEEESC---CBSEEEEEETTEEEE----------E--------ECBTTCCEEEECGG-GCCSE
T ss_pred EEEEEEcChhhcCCCeEEEEECC---CCceeEEEECCEEec----------c--------ccCCCCCEEEcChH-hhcCC
Confidence 45568886532 22345566543 345679999998542 1 12446778999987 78899
Q ss_pred ecEEEEEEe
Q 006927 586 ENTIFLKQA 594 (625)
Q Consensus 586 ~NtI~l~~~ 594 (625)
+|+|.+.+.
T Consensus 126 ~N~L~V~v~ 134 (848)
T 2je8_A 126 ENHLYIYFH 134 (848)
T ss_dssp EEEEEEEEE
T ss_pred CcEEEEEEe
Confidence 999999984
No 72
>3hn5_A Putative exported protein BF0290; YP_210027.1, structural genomics, joint center for S genomics, JCSG; HET: MSE; 1.70A {Bacteroides fragilis nctc 9343}
Probab=33.07 E-value=1.2e+02 Score=29.66 Aligned_cols=62 Identities=15% Similarity=0.294 Sum_probs=40.6
Q ss_pred ceEEEEEEEEeccccccCCcccCceEEEecCCCCCCCcccccccceEEEEeCCCcceEeCcccCCeeEEEEE
Q 006927 314 RGNISGRLQVQDRYVSDDYITVDGAYVGLAPSGDAGSWQTECKGYQFWTTTDADGFFSISDILVGDYNLYAF 385 (625)
Q Consensus 314 RGtVsG~v~~~d~~~~~~~~pa~~a~V~La~~g~~g~~q~~~~~yqywt~td~~G~F~I~nVrpGtY~L~a~ 385 (625)
-.+++|+|.-.+--+.-+ ...++-+-|-+.+ |.. .+-|.+. ...||.|+ ..+=.|+|.|..-
T Consensus 10 ~a~l~G~iv~tGE~i~~~--~~~gv~i~l~E~g----y~~--~~~~~~~-v~qDGtf~-~~lF~G~Yki~~~ 71 (215)
T 3hn5_A 10 ESMLTGRVMYNGEALQLR--GNEAVQLQLYQHG----YAK--HDPINVY-VNQDGMYS-ANLFDGEYQMITK 71 (215)
T ss_dssp CEEEEEEEEETTEECCCC--CTTSCEEEEESSC----GGG--CCCEEEE-BCTTSEEE-EEECSEEEEEEEC
T ss_pred CceEEEEEEECCCEeeec--CCCceEEEEEEcc----cCC--CCCeeEE-EcCCCcEE-EEEECceeEEEEe
Confidence 479999997333222211 1234777775554 652 2445553 78899999 7899999999984
No 73
>3lvt_A Glycosyl hydrolase, family 38; PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.55A {Enterococcus faecalis}
Probab=32.58 E-value=2.9e+02 Score=32.41 Aligned_cols=124 Identities=12% Similarity=0.090 Sum_probs=70.5
Q ss_pred EEEEECCeEEEEEeCCCeeEEEEEE--cCeecccccccCCCceeeEEEeecCCCCCC-----CCCceeee-cCceEEEEE
Q 006927 14 HVVMDNGLLQVTISKPDGHVTRIQG--YGIDNMLEVRNKETNRGYWDLVWSETGSTG-----TTGTDELI-KGSDFRVIV 85 (625)
Q Consensus 14 ~vvldNg~l~vtv~k~~G~vtsl~y--~G~enll~~~~~~~~~gY~d~~w~~~G~~~-----~~~~~~~~-~gt~~~vi~ 85 (625)
..+|+|+.+.|+|++ +|.| +|.= +|.+ +.. -.-|+|. |...+..- .+.-+... ....++|++
T Consensus 527 ~~~leN~~~~v~~d~-~G~l-sl~Dk~~gre-~~~------~~~~~d~-gd~g~~Y~~~p~~~d~~~~~~~~~~~v~v~e 596 (899)
T 3lvt_A 527 TNEMENEFIQVKIEN-NGSL-TIADKKTGET-FSK------LLTFEDT-GDIGNEYIFFKPTEDQGITTENVTAEITNKE 596 (899)
T ss_dssp TTEEECSSEEEEECT-TSCE-EEEETTTCCE-EEE------ETEEEEE-ECCSBTTBCCCCTTCCCEESTTCCCEEEEEE
T ss_pred CcEEecCcEEEEEcC-CCcE-EEEECCCCeE-EEE------EEEEecC-CCCCCceeecCCcCCceeeccCCCceEEEEE
Confidence 357999999999987 8999 6742 3443 221 0124443 22111000 00011000 125778888
Q ss_pred ecCCEEEEEEEEeec-c-cc------------------cC---CccccceeEEEEEeCCcceeEEEEEeeccCCCCCCCC
Q 006927 86 ENEEQVEISFTRMWD-I-SL------------------QD---KLAPLNIDKRYIMLGNTSGFYSYAIYEHMGEWPAFNL 142 (625)
Q Consensus 86 ~~~~~i~vs~~~~~~-~-s~------------------~g---~~~~l~l~~~~v~r~g~sgiY~y~i~~~~~~~p~~~l 142 (625)
+++-...|.+...|. | +. .| ...++.|.+.+.|..|++-|-.=+....... =
T Consensus 597 ~gpl~~~v~v~~~~~~P~~~~~~~~~~~~~~~~~~~r~~~~S~~~~~~~i~q~i~L~~~~~~id~~~~Vdw~~~-----~ 671 (899)
T 3lvt_A 597 NSPVKASYQIKQTVMLPVAADERLEEEQKAVREFRERLAQRSTTLRPFEITTMVTMIKESNQLFFETTINNQIK-----D 671 (899)
T ss_dssp ECSSEEEEEEEEEEEEESSBCTHHHHHHHTTCCGGGCCCCBCSCEEEEEEEEEEEEETTCCCEEEEEEEEECCC-----S
T ss_pred cCCCEEEEEEEEEEccccchhhhhcccccccccchhhhhcccccccceEEEEEEEEeCCCCEEEEEEEECCCcC-----C
Confidence 888777777776653 1 00 01 2356689999999999998887776543331 1
Q ss_pred CcceEEEEec
Q 006927 143 PQTRMVFKLR 152 (625)
Q Consensus 143 ge~R~v~Rl~ 152 (625)
-.+|..|.++
T Consensus 672 ~~Lrv~Fp~~ 681 (899)
T 3lvt_A 672 HRLRVLFPTG 681 (899)
T ss_dssp EEEEEEECCS
T ss_pred EEEEEECCCC
Confidence 3456666554
No 74
>3og2_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family 35, glycoprot hydrolase; HET: NAG BMA MAN GLC; 1.20A {Trichoderma reesei} PDB: 3ogr_A* 3ogs_A* 3ogv_A*
Probab=31.38 E-value=47 Score=39.61 Aligned_cols=70 Identities=21% Similarity=0.224 Sum_probs=42.7
Q ss_pred EEEEEEecCCCCCCcEEEEEEEeccc---CceEEEEEcCCCCCCCCcccccccCCCceeceeeeeeeEEEEEEeecCCee
Q 006927 507 WQIKFKLDSVDQNATYKLRIALATAN---VAELQVRVNDEKAEPPLFATGQIGHDNAIARHGIHGLYRLYSMDVPAANLA 583 (625)
Q Consensus 507 w~I~F~L~~~~~~~~~tLriala~a~---~~~~~V~vNg~~~~~p~~~t~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~ 583 (625)
.+=.|+|+-....-...|.+-+.... .-|.++.|||++... + ...++ -..+|.||.+.|.
T Consensus 887 yrt~f~LdlP~~g~Dvpl~~~f~~~~~~~~yRa~lfVNG~q~Gk--y-v~~iG--------------PQt~FpvP~GILn 949 (1003)
T 3og2_A 887 YAAKLPLHLPAQEYDIPLSFVFDNATAAAPYRALLYVNGFQYGK--Y-VSNIG--------------PQTEFPVPEGILD 949 (1003)
T ss_dssp EEEEEEEECCTTTEECCEEEEECCCSSCCCEEEEEEETTEEEEE--E-ETTTC--------------CCCEEEECBTTBC
T ss_pred EEEEeecCCCcccCceeEEEEECCCCCCcceEEEEEEeceeeee--e-cCCCC--------------CcceecCCccccc
Confidence 33467775320111233444444332 359999999986541 0 00111 2357999999998
Q ss_pred -eeecEEEEEE
Q 006927 584 -AGENTIFLKQ 593 (625)
Q Consensus 584 -~G~NtI~l~~ 593 (625)
.|+|+|-|++
T Consensus 950 ~~G~Ntialal 960 (1003)
T 3og2_A 950 YNGDNWIGVAL 960 (1003)
T ss_dssp TEEEEEEEEEE
T ss_pred CCCcceEEEEE
Confidence 7999999998
No 75
>1jz7_A Lactase, beta-galactosidase, LACZ; TIM barrel (alpha/beta barrel), jelly-roll barrel, immunoglobulin, beta supersandwich, hydrolase; HET: GAL; 1.50A {Escherichia coli} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3 PDB: 1hn1_A 1jyx_A* 1jz3_A* 1jz4_A* 1jz5_A* 1jz6_A* 1dp0_A* 3iap_A* 1jz8_A* 1jyn_A* 1jyv_A* 1jyw_A* 3iaq_A* 1px3_A 1px4_A* 3czj_A* 3i3e_A 3i3d_A* 3i3b_A 3dym_A ...
Probab=30.77 E-value=30 Score=41.39 Aligned_cols=69 Identities=14% Similarity=0.112 Sum_probs=45.9
Q ss_pred eeEEEEEEecCCCC-CCcEEEEEEEecccCceEEEEEcCCCCCCCCcccccccCCCceeceeeeeeeEEEEEEeecCCee
Q 006927 505 TTWQIKFKLDSVDQ-NATYKLRIALATANVAELQVRVNDEKAEPPLFATGQIGHDNAIARHGIHGLYRLYSMDVPAANLA 583 (625)
Q Consensus 505 ~~w~I~F~L~~~~~-~~~~tLriala~a~~~~~~V~vNg~~~~~p~~~t~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~ 583 (625)
+..+-.|.+++... .....|++..+ .....|.|||+.+.. -.|-+..++|+|.. .|+
T Consensus 121 g~Yrr~F~vp~~~~~~~~v~L~F~gv---~~~a~V~vNG~~vG~------------------~~gg~~p~~~DIT~-~L~ 178 (1023)
T 1jz7_A 121 GCYSLTFNVDESWLQEGQTRIIFDGV---NSAFHLWCNGRWVGY------------------GQDSRLPSEFDLSA-FLR 178 (1023)
T ss_dssp EEEEEEEEECHHHHHSSEEEEEESCE---ESEEEEEETTEEEEE------------------EECTTSCEEEECTT-TCC
T ss_pred EEEEEEEEeCchhcCCCEEEEEECCC---CcceEEEECCEEEcc------------------ccCCCCceEEecHh-hcc
Confidence 34566788876432 23455655443 446789999985420 12345578899976 788
Q ss_pred eeecEEEEEEec
Q 006927 584 AGENTIFLKQAT 595 (625)
Q Consensus 584 ~G~NtI~l~~~~ 595 (625)
.|+|+|.+.+.+
T Consensus 179 ~G~N~L~V~V~~ 190 (1023)
T 1jz7_A 179 AGENRLAVMVLR 190 (1023)
T ss_dssp SEEEEEEEEEES
T ss_pred CCCcEEEEEEEe
Confidence 999999999864
No 76
>3phz_A Ricin B-related lectin; beta trefoil, saccharide binding lectin, 2,6-sialyl-lactosam sugar binding protein; HET: NAG GAL SIA; 1.70A {Polyporus squamosus}
Probab=30.62 E-value=96 Score=31.73 Aligned_cols=77 Identities=14% Similarity=0.267 Sum_probs=48.8
Q ss_pred cccCceEEEecCCCCCCCcccccccceEEEEeCCCcceEeCcccCCeeEEEEEEcceeeeeeeeeEEEEeCCCceeccc-
Q 006927 333 ITVDGAYVGLAPSGDAGSWQTECKGYQFWTTTDADGFFSISDILVGDYNLYAFVPGFIGDYRNDVVLTITEDSDIDMGD- 411 (625)
Q Consensus 333 ~pa~~a~V~La~~g~~g~~q~~~~~yqywt~td~~G~F~I~nVrpGtY~L~a~~~G~~G~~~~~~~VtV~aG~t~~l~~- 411 (625)
-.+.++.|.+ |...+...|-|+..+.+|.|+|.++..|.+ +.|..|.++.-|.
T Consensus 77 sTadGa~V~q--------W~~nGg~NQqW~l~~~~G~y~I~n~~SGkc------------------LDV~~gsttanGaV 130 (286)
T 3phz_A 77 AATDGTAIIG--------YRPTGGDNQKWIISQINDVWKIKSKETGTF------------------VTLLNGDGGGTGTV 130 (286)
T ss_dssp CCSTTEEEEE--------ECCCCCGGGCEEEEESSSCEEEEETTTCCE------------------EEEETC---CCCEE
T ss_pred cCCCCCeEEE--------eCCCCChhcEEEEEcCCCeEEEEECCCCcE------------------EEeCCCCcCCCceE
Confidence 3467788886 666677789998877789999999888753 2233333311121
Q ss_pred eEEeeCC--CCCceEEEeccCCCccce
Q 006927 412 LVFEPIR--DGPTLWEIGIPSRSAAEF 436 (625)
Q Consensus 412 l~~~~p~--~g~~LweIG~pDrta~eF 436 (625)
..|. +. ...+.|++.--..++.++
T Consensus 131 ~qWt-~~tgg~NQqW~~~~vs~tg~~i 156 (286)
T 3phz_A 131 VGWQ-NITNNTSQNWTFQKLSQTGANV 156 (286)
T ss_dssp EEES-CCCSSCTTCEEEEECEEEHHHH
T ss_pred EEcc-CCCCCccCcEEEEEccCCcccc
Confidence 2344 23 567999987766666655
No 77
>1cwv_A Invasin; integrin-binding protein, INV gene, structural protein; HET: CIT; 2.30A {Yersinia pseudotuberculosis} SCOP: b.1.14.1 b.1.14.1 b.1.14.1 b.1.14.1 d.169.1.3
Probab=30.27 E-value=2.4e+02 Score=30.70 Aligned_cols=75 Identities=19% Similarity=0.123 Sum_probs=48.3
Q ss_pred eEEEEEEEEeccccccCCcccCceEEEecCCCCCCCcccccccceEEEEeCCCcceEeC--cccCCeeEEEEEEcceeee
Q 006927 315 GNISGRLQVQDRYVSDDYITVDGAYVGLAPSGDAGSWQTECKGYQFWTTTDADGFFSIS--DILVGDYNLYAFVPGFIGD 392 (625)
Q Consensus 315 GtVsG~v~~~d~~~~~~~~pa~~a~V~La~~g~~g~~q~~~~~yqywt~td~~G~F~I~--nVrpGtY~L~a~~~G~~G~ 392 (625)
-+++-+| .|. .+.|..+..|.+..++. . .-..--..||++|.+++. .-++|+|+++|.+.|.
T Consensus 28 ~~ltatV--~D~----~Gnpv~g~~Vtf~~~~g--~-----~~~~~t~~Td~~G~a~~tltst~aG~~~VtAt~~g~--- 91 (492)
T 1cwv_A 28 ITVEFTV--ADF----EGKPLAGQEVVITTNNG--A-----LPNKITEKTDANGVARIALTNTTDGVTVVTAEVEGQ--- 91 (492)
T ss_dssp EEEEEEE--ECT----TSCBCCSCEEEEECCTT--C-----BSCEEEEECCTTSEEEEEEBCSSCEEEEEEEEETTE---
T ss_pred EEEEEEE--EcC----CCCCCCCCEEEEEECCC--c-----cccccceeeCCCceEEEEEEcCcceEEEEEEEECCc---
Confidence 4455554 562 37888888888765431 1 111234578999987754 5689999999998763
Q ss_pred eeeeeEEEEeCCCc
Q 006927 393 YRNDVVLTITEDSD 406 (625)
Q Consensus 393 ~~~~~~VtV~aG~t 406 (625)
.+...|++.+|..
T Consensus 92 -s~s~~v~f~a~~~ 104 (492)
T 1cwv_A 92 -RQSVDTHFVKGTI 104 (492)
T ss_dssp -EEEEEEEEECCCB
T ss_pred -cceeEEEEeeccC
Confidence 2344567776643
No 78
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=30.23 E-value=39 Score=38.20 Aligned_cols=26 Identities=19% Similarity=0.323 Sum_probs=22.7
Q ss_pred EEEeCCCcceEeCcccCCeeEEEEEE
Q 006927 361 WTTTDADGFFSISDILVGDYNLYAFV 386 (625)
Q Consensus 361 wt~td~~G~F~I~nVrpGtY~L~a~~ 386 (625)
|..+.....-+..|++||+|+|.|.+
T Consensus 737 W~~~~~~~~~~ytnL~pG~Y~f~V~a 762 (795)
T 4a2l_A 737 WYYLTDSRTVSYSNLPQGTYQFLVKA 762 (795)
T ss_dssp CEEESSCCEEEEECCCSEEEEEEEEE
T ss_pred ccCCCCcCeEEecccCCCeEEEEEEE
Confidence 66777777889999999999999986
No 79
>3kpt_A Collagen adhesion protein; intramolecular amide bond, pilin subunit, beta sheet; 2.10A {Bacillus cereus atcc 14579} PDB: 3rkp_A
Probab=29.42 E-value=47 Score=34.65 Aligned_cols=65 Identities=22% Similarity=0.326 Sum_probs=39.6
Q ss_pred EEEEEEEeccccccCCcccCceEEEecCCCCCCCcccccccceEEEEeCCCcceEeCcccCCeeEEEEE
Q 006927 317 ISGRLQVQDRYVSDDYITVDGAYVGLAPSGDAGSWQTECKGYQFWTTTDADGFFSISDILVGDYNLYAF 385 (625)
Q Consensus 317 VsG~v~~~d~~~~~~~~pa~~a~V~La~~g~~g~~q~~~~~yqywt~td~~G~F~I~nVrpGtY~L~a~ 385 (625)
..|.|.+...- ..++.+..+|...|... +|.....+ +...-..+|++|.|.|.++++|+|.|.=-
T Consensus 249 ~tg~i~i~K~d-~~~~~~L~GA~F~l~~~--~g~~~~~~-~~~~~~~td~~G~~~~~~L~~G~Y~l~E~ 313 (355)
T 3kpt_A 249 TTGIIELTKID-SANKNKMKGAEFVLKDN--NGKIVVVA-GKEVTGVSDENGVIKWSNIPYGDYQIFET 313 (355)
T ss_dssp CEEEEEEEEEE-TTTCCBCSCCEEEEEET--TSCBCBSS-SSBCEEECCTTSEEEEEEEESSEEEEEEE
T ss_pred cccceEEEEEe-CCCCcccCCCEEEEEeC--CCCEEEec-cceEEEEECCCCeEEECcCCCceEEEEEE
Confidence 35665554311 12356888888877532 12222111 11123458999999999999999999865
No 80
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=28.87 E-value=46 Score=37.35 Aligned_cols=27 Identities=19% Similarity=0.293 Sum_probs=21.4
Q ss_pred EEEeC-CCcceEeCcccCCeeEEEEEEc
Q 006927 361 WTTTD-ADGFFSISDILVGDYNLYAFVP 387 (625)
Q Consensus 361 wt~td-~~G~F~I~nVrpGtY~L~a~~~ 387 (625)
|..++ ....-+..|++||+|+|.|.+.
T Consensus 702 W~~~~~~~~~~~ytnL~pG~Y~f~V~a~ 729 (758)
T 3ott_A 702 WNFLKSNINRITYSNLSYGNYQLIISKL 729 (758)
T ss_dssp CEECCTTCCEEEECSCCSEEEEEEEEEB
T ss_pred ccCCCCCcceEEecCCCCccEEEEEEEe
Confidence 66655 3456889999999999999863
No 81
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=28.86 E-value=54 Score=29.31 Aligned_cols=15 Identities=20% Similarity=0.200 Sum_probs=13.4
Q ss_pred cccCCeeEEEEEEcc
Q 006927 374 DILVGDYNLYAFVPG 388 (625)
Q Consensus 374 nVrpGtY~L~a~~~G 388 (625)
.++||+|+|.|+..|
T Consensus 89 ~~~pG~Ytl~a~l~~ 103 (120)
T 3isy_A 89 VPEPGTYEVKVTFKG 103 (120)
T ss_dssp CCCSEEEEEEEEECC
T ss_pred CCCCccEEEEEEEEe
Confidence 689999999999765
No 82
>3oba_A Beta-galactosidase; TIM barrel, tetramer, GH2, glycosidase, hydrolase; 2.75A {Kluyveromyces lactis} PDB: 3ob8_A
Probab=26.80 E-value=33 Score=41.11 Aligned_cols=69 Identities=20% Similarity=0.205 Sum_probs=45.4
Q ss_pred eeEEEEEEecCCC-CCCcEEEEEEEecccCceEEEEEcCCCCCCCCcccccccCCCceeceeeeeeeEEEEEEeecCCee
Q 006927 505 TTWQIKFKLDSVD-QNATYKLRIALATANVAELQVRVNDEKAEPPLFATGQIGHDNAIARHGIHGLYRLYSMDVPAANLA 583 (625)
Q Consensus 505 ~~w~I~F~L~~~~-~~~~~tLriala~a~~~~~~V~vNg~~~~~p~~~t~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~ 583 (625)
+..+=.|.+++.. ......|++.. ......|.|||+.+.. -.|-+..++|+|+. .|+
T Consensus 114 g~Yrr~f~vp~~~~~~~~v~L~F~g---v~~~a~V~vNG~~vG~------------------~~gg~~p~~~DIT~-~lk 171 (1032)
T 3oba_A 114 GVYARTFELDSKSIESFEHRLRFEG---VDNCYELYVNGQYVGF------------------NKGSRNGAEFDIQK-YVS 171 (1032)
T ss_dssp EEEEEEEEECHHHHHHEEEEEEESC---EESEEEEEETTEEEEE------------------EECTTSCEEEECTT-TCC
T ss_pred EEEEEEEEECchhcCCCEEEEEECC---cceeEEEEECCEEEEE------------------EeCCcccEEEEChh-hcc
Confidence 3456678887643 22234455433 3466789999985420 12445678999986 688
Q ss_pred eeecEEEEEEec
Q 006927 584 AGENTIFLKQAT 595 (625)
Q Consensus 584 ~G~NtI~l~~~~ 595 (625)
.|+|+|.+.+.+
T Consensus 172 ~G~N~L~V~V~~ 183 (1032)
T 3oba_A 172 EGENLVVVKVFK 183 (1032)
T ss_dssp SEEEEEEEEEES
T ss_pred CCcEEEEEEEEC
Confidence 999999999965
No 83
>3bs6_A Inner membrane protein OXAA; YIDC/OXA1/ALB3 family, membrane insertion, chaperone, SEC translocon, periplasmic domain, beta supersandwich fold; HET: PG4 PGE 2PE; 1.80A {Escherichia coli}
Probab=25.47 E-value=46 Score=33.30 Aligned_cols=29 Identities=17% Similarity=0.245 Sum_probs=25.4
Q ss_pred CcEEEEECCeEEEEEeCCCeeEEEEEEcC
Q 006927 12 DHHVVMDNGLLQVTISKPDGHVTRIQGYG 40 (625)
Q Consensus 12 g~~vvldNg~l~vtv~k~~G~vtsl~y~G 40 (625)
+..|+|+|+.|.++|+..+|+|.++.++.
T Consensus 3 ~~~i~v~td~l~~~is~~GG~I~~~~Lk~ 31 (280)
T 3bs6_A 3 GKLISVKTDVLDLTINTRGGDVEQALLPA 31 (280)
T ss_dssp -CEEEEECSSCEEEEETBTTEEEEEEEEE
T ss_pred CCEEEEECCcEEEEEECCCCeEeeeEcCC
Confidence 35699999999999999999999998754
No 84
>4e8d_A Glycosyl hydrolase, family 35; TIM barrel, beta-propeller, glycohydrolase; 1.80A {Streptococcus pneumoniae} PDB: 4e8c_A
Probab=24.97 E-value=23 Score=39.91 Aligned_cols=64 Identities=22% Similarity=0.359 Sum_probs=38.7
Q ss_pred ceeEEEEEEecCCCCCCcEEEEEEEecccCceEEEEEcCCCCCCCCcccccccCCCceeceeeeeeeEEEEEEeecCCee
Q 006927 504 ATTWQIKFKLDSVDQNATYKLRIALATANVAELQVRVNDEKAEPPLFATGQIGHDNAIARHGIHGLYRLYSMDVPAANLA 583 (625)
Q Consensus 504 ~~~w~I~F~L~~~~~~~~~tLriala~a~~~~~~V~vNg~~~~~p~~~t~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~ 583 (625)
|.-.+-.|+++.. ..+| | ....-+.=.|.|||..+.. -|.+|- ..++| ||+.+|+
T Consensus 506 P~fy~g~f~~~~~--~DTf-L----d~~gwgKG~v~VNG~nLGR----YW~~GP-----------Q~tLY---vP~~~Lk 560 (595)
T 4e8d_A 506 PAFYAYDFTVEEP--KDTY-L----DLSEFGKGVAFVNGQNLGR----FWNVGP-----------TLSLY---IPHSYLK 560 (595)
T ss_dssp CEEEEEEEEESSC--CBEE-E----ECTTCCEEEEEETTEEEEE----EETTCS-----------BCEEE---ECGGGSC
T ss_pred CeEEEEEEEcCCC--CCEE-E----eCCCCceEEEEECCeeeec----ccCCCC-----------eEEEE---ecHHHhC
Confidence 4556667777432 1233 2 2234566789999987653 222221 22444 9999999
Q ss_pred eeecEEEEE
Q 006927 584 AGENTIFLK 592 (625)
Q Consensus 584 ~G~NtI~l~ 592 (625)
+|.|+|.+=
T Consensus 561 ~G~NeIvvf 569 (595)
T 4e8d_A 561 EGANRIIIF 569 (595)
T ss_dssp SEEEEEEEE
T ss_pred cCCceEEEE
Confidence 999986653
No 85
>1b4r_A Protein (PKD1_human); PKD domain 1 from human polycystein-1, polycystin (precursor), membrane protein; NMR {Homo sapiens} SCOP: b.1.3.1
Probab=24.55 E-value=67 Score=26.53 Aligned_cols=29 Identities=17% Similarity=0.190 Sum_probs=16.9
Q ss_pred ccCCeeEEEEEEcceeeeeeeeeEEEEeC
Q 006927 375 ILVGDYNLYAFVPGFIGDYRNDVVLTITE 403 (625)
Q Consensus 375 VrpGtY~L~a~~~G~~G~~~~~~~VtV~a 403 (625)
-+||+|++++-+.--.+.-.....|+|++
T Consensus 52 ~~~G~YtV~Ltv~~g~~~~~a~~~V~V~~ 80 (80)
T 1b4r_A 52 VLPGRYHVTAVLALGAGSALLGTDVQVEA 80 (80)
T ss_dssp CSSEEEEEEEEEECSSCEEEEEEEEEEBC
T ss_pred CCCcEEEEEEEEEeCCceEEEEEEEEEEC
Confidence 47999999887641112223445566653
No 86
>3blc_A Inner membrane protein OXAA; YIDC, membrane assembly facilitator, chaperone, periplasmic inner membrane, transmembrane; 2.50A {Escherichia coli K12}
Probab=23.99 E-value=50 Score=33.97 Aligned_cols=31 Identities=19% Similarity=0.210 Sum_probs=26.8
Q ss_pred EeCcEEEEECCeEEEEEeCCCeeEEEEEEcC
Q 006927 10 IQDHHVVMDNGLLQVTISKPDGHVTRIQGYG 40 (625)
Q Consensus 10 ~~g~~vvldNg~l~vtv~k~~G~vtsl~y~G 40 (625)
-.+..|+|+|+.|.++|+..+|+|.++.++.
T Consensus 32 ~~~~~i~V~td~l~~~is~~GG~I~~~~Lk~ 62 (330)
T 3blc_A 32 GQGKLISVKTDVLDLTINTRGGDVEQALLPA 62 (330)
T ss_dssp -CCCEEEEECSSCEEEEETBTCCEEEEEEEE
T ss_pred CCCCEEEEECCcEEEEEECCCCEEeEEECCC
Confidence 3456799999999999999999999998754
No 87
>3bwu_D FIMD, outer membrane usher protein FIMD, N-terminal DOM; usher, N-terminal domain, ternary complex with chaperone and subunit, chaperone, structural protein, mebrane protein; 1.76A {Escherichia coli} SCOP: b.167.1.1 PDB: 1ze3_D 1zdx_A
Probab=23.51 E-value=70 Score=28.03 Aligned_cols=15 Identities=13% Similarity=0.461 Sum_probs=13.3
Q ss_pred cccCCeeEEEEEEcc
Q 006927 374 DILVGDYNLYAFVPG 388 (625)
Q Consensus 374 nVrpGtY~L~a~~~G 388 (625)
.+.||+|.|.+|++|
T Consensus 27 ~~~PG~Y~vdI~vN~ 41 (125)
T 3bwu_D 27 ELPPGTYRVDIYLNN 41 (125)
T ss_dssp SSCSEEEEEEEEETT
T ss_pred CcCCcEEEEEEEECC
Confidence 478999999999876
No 88
>3qht_C Monobody YSMB-1; fibronectin type III, yeast small ubiquitin-like modifier, S NOVO protein; 2.40A {Artificial gene}
Probab=22.90 E-value=67 Score=25.95 Aligned_cols=37 Identities=16% Similarity=0.091 Sum_probs=24.8
Q ss_pred CCcceEeCcccCCe-eEEEEEEcceeeeee-eeeEEEEe
Q 006927 366 ADGFFSISDILVGD-YNLYAFVPGFIGDYR-NDVVLTIT 402 (625)
Q Consensus 366 ~~G~F~I~nVrpGt-Y~L~a~~~G~~G~~~-~~~~VtV~ 402 (625)
..-.++|.+.+||+ |.+.+.+.-..|+-. ....|+|+
T Consensus 56 ~~t~~~l~~L~p~t~Y~v~V~A~~~~G~gp~ss~p~~~~ 94 (97)
T 3qht_C 56 SSSTATISGLSPGVDYTITVYAYYSYYDLYYSYSPSSIN 94 (97)
T ss_dssp TCCEEEECSCCTTCEEEEEEEEEEEETTEEEECSCEEEE
T ss_pred CcCEEEeCCCCCCCEEEEEEEEEeCCccCCCCCCCEEEe
Confidence 45679999999998 999998643333322 23346655
No 89
>2p9r_A Alpha-2-M, alpha-2-macroglobulin; human alpha2-macroglobulin, Mg2 domain, X-RAY, signaling protein; 2.30A {Homo sapiens}
Probab=22.86 E-value=3.2e+02 Score=22.45 Aligned_cols=67 Identities=15% Similarity=0.240 Sum_probs=35.7
Q ss_pred CCCCCCCCceEEEEEEEEeccccccCCcccCce--EEEecCCCCCCCcccccccceEE-EEeCCCc----ceEeCc-ccC
Q 006927 306 EDFPKWNQRGNISGRLQVQDRYVSDDYITVDGA--YVGLAPSGDAGSWQTECKGYQFW-TTTDADG----FFSISD-ILV 377 (625)
Q Consensus 306 ~~y~~~~qRGtVsG~v~~~d~~~~~~~~pa~~a--~V~La~~g~~g~~q~~~~~yqyw-t~td~~G----~F~I~n-Vrp 377 (625)
+=|-| .| +|.=++.+.|. +..|+... .|.|..|. +.-..-| ..++++| .|.++. ...
T Consensus 11 ~iYrP-Ge--tV~~~~~~~~~----~~~p~~~~~~~v~l~dp~--------g~~v~~~~~~~~~~G~~~~~f~Lp~~~~~ 75 (102)
T 2p9r_A 11 SIYKP-GQ--TVKFRVVSMDE----NFHPLNELIPLVYIQDPK--------GNRIAQWQSFQLEGGLKQFSFPLSSEPFQ 75 (102)
T ss_dssp SEECT-TC--EEEEEEEEECG----GGCBCCCEEEEEEEECTT--------SCEEEEEEEEECBTTEEEEEEECCSSCCC
T ss_pred cccCC-CC--EEEEEEEEECC----CCcCCCCCceEEEEECCC--------CCEEEEEEeecCCCCEEEEEEECCCCCCC
Confidence 34555 23 45555544552 23454433 56665554 2333344 3345555 455644 467
Q ss_pred CeeEEEEEEc
Q 006927 378 GDYNLYAFVP 387 (625)
Q Consensus 378 GtY~L~a~~~ 387 (625)
|+|+|.++..
T Consensus 76 G~y~i~~~~~ 85 (102)
T 2p9r_A 76 GSYKVVVQKK 85 (102)
T ss_dssp EEEEEEEECT
T ss_pred eeEEEEEEEC
Confidence 9999999953
No 90
>1r6v_A Subtilisin-like serine protease; sandwich domain, propeptide, hydrolase; 1.70A {Fervidobacterium pennivorans} SCOP: c.41.1.1
Probab=22.13 E-value=1.6e+02 Score=33.52 Aligned_cols=29 Identities=24% Similarity=0.519 Sum_probs=26.1
Q ss_pred cceEEEEeCCCcceEeCcccCCeeEEEEE
Q 006927 357 GYQFWTTTDADGFFSISDILVGDYNLYAF 385 (625)
Q Consensus 357 ~yqywt~td~~G~F~I~nVrpGtY~L~a~ 385 (625)
+-.|++.++.+|...|..+.||+|+|++-
T Consensus 475 ~~~~~~~t~~dg~~~~~~~~~G~Y~~~v~ 503 (671)
T 1r6v_A 475 GSCYYAKTGPDGIARFPHIDSGTYDIFVG 503 (671)
T ss_dssp SCCEEEECCTTSEEEEEEEECEEEEEEEE
T ss_pred CceEecccCCCCceeeeccCceEEEEEEe
Confidence 45589999999999999999999999985
No 91
>3t04_D Monobody 7C12; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 2.10A {Homo sapiens}
Probab=21.79 E-value=58 Score=26.84 Aligned_cols=36 Identities=17% Similarity=0.154 Sum_probs=25.5
Q ss_pred CCcceEeCcccCCe-eEEEEEEcce--eeeeeeeeEEEEe
Q 006927 366 ADGFFSISDILVGD-YNLYAFVPGF--IGDYRNDVVLTIT 402 (625)
Q Consensus 366 ~~G~F~I~nVrpGt-Y~L~a~~~G~--~G~~~~~~~VtV~ 402 (625)
..-.++|.+.+||+ |.+.+.+.-. .|+-. ...|+|+
T Consensus 62 ~~ts~~l~~L~p~t~Y~~~V~A~~~~~~G~~~-S~p~~~~ 100 (103)
T 3t04_D 62 YYSTATISGLKPGVDYTITVYAYDTFFPGYEP-NSPISIN 100 (103)
T ss_dssp TCCEEEECSCCTTCCEEEEEEEESCCCTTCCC-SCCEEEE
T ss_pred CcCEEEeCCCCCCCEEEEEEEEEeCCCCCCCC-CCCEEEe
Confidence 34679999999999 9999997433 45434 3446665
No 92
>3b83_A Ten-D3; beta sheet, computational redesigned protein, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix; 2.40A {Homo sapiens}
Probab=20.88 E-value=86 Score=25.48 Aligned_cols=22 Identities=5% Similarity=0.157 Sum_probs=18.3
Q ss_pred CCcceEeCcccCCe-eEEEEEEc
Q 006927 366 ADGFFSISDILVGD-YNLYAFVP 387 (625)
Q Consensus 366 ~~G~F~I~nVrpGt-Y~L~a~~~ 387 (625)
..-.|+|.+++||+ |.+.+.+.
T Consensus 53 ~~t~~~i~~L~p~t~Y~~~V~A~ 75 (100)
T 3b83_A 53 SITSLTLTNLEPNTTYEIRIVAR 75 (100)
T ss_dssp TEEEEEECSCCTTCEEEEEEEEE
T ss_pred cceEEEECCCCCCCEEEEEEEEE
Confidence 34579999999997 99998864
No 93
>2h41_A Fibronectin; beta sandwich, cell adhesion, structural protein; NMR {Homo sapiens} PDB: 2h45_A
Probab=20.39 E-value=1.7e+02 Score=24.43 Aligned_cols=22 Identities=23% Similarity=0.416 Sum_probs=19.2
Q ss_pred CCCcceEeCcccCCe-eEEEEEE
Q 006927 365 DADGFFSISDILVGD-YNLYAFV 386 (625)
Q Consensus 365 d~~G~F~I~nVrpGt-Y~L~a~~ 386 (625)
...-.++|.+.+||+ |++.+++
T Consensus 56 g~~~s~~l~~L~PgT~Y~V~v~a 78 (95)
T 2h41_A 56 STATSVNIPDLLPGRKYIVNVYQ 78 (95)
T ss_dssp TTCCEEEECSCCTTCEEEEEEEE
T ss_pred CCccEEEECCCCCCCEEEEEEEE
Confidence 355789999999998 9999996
No 94
>3q1n_A Galactose mutarotase related enzyme; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE; 1.61A {Lactobacillus casei}
Probab=20.38 E-value=1.1e+02 Score=30.77 Aligned_cols=32 Identities=6% Similarity=0.214 Sum_probs=27.4
Q ss_pred EEEEECCeEEEEEeCCCeeEEEEEE--cCeeccc
Q 006927 14 HVVMDNGLLQVTISKPDGHVTRIQG--YGIDNML 45 (625)
Q Consensus 14 ~vvldNg~l~vtv~k~~G~vtsl~y--~G~enll 45 (625)
.++|.|+.++++|..-+|.|+||+. +|.|.|+
T Consensus 2 ~~~l~n~~~~~~i~~~Ga~l~s~~~~~~g~e~l~ 35 (294)
T 3q1n_A 2 MITIENSKFKAGIAERGAELQSLVNKADNYEYVW 35 (294)
T ss_dssp EEEEECSSEEEEEETBTTEEEEEEETTTTEECBC
T ss_pred EEEEECCCEEEEEEccCcEEEEEEeCCCCCEEEE
Confidence 4789999999999999999999998 4776554
No 95
>2xtl_A Cell WALL surface anchor family protein; GRAM-positive PILI protein, BP-2A 515 allele, immunoglobulin domains, structural protein; 1.75A {Streptococcus agalactiae}
Probab=20.05 E-value=37 Score=36.91 Aligned_cols=45 Identities=24% Similarity=0.462 Sum_probs=30.4
Q ss_pred EEeCCCcceEeCcccCCeeEEEEE-Ec-ceeeeeeeeeEEEEeCCCce
Q 006927 362 TTTDADGFFSISDILVGDYNLYAF-VP-GFIGDYRNDVVLTITEDSDI 407 (625)
Q Consensus 362 t~td~~G~F~I~nVrpGtY~L~a~-~~-G~~G~~~~~~~VtV~aG~t~ 407 (625)
-.+|++|.|.|.++.+|+|.|.=- +| |+.= ......++|.+++..
T Consensus 378 ~ttd~~G~~~~~~L~~G~Y~l~EtkAP~GY~l-~~~~~~f~i~~~~~~ 424 (452)
T 2xtl_A 378 LISNDKGQFEITGLTEGQYSLEETQAPTGYAK-LSGDVSFNVNATSYS 424 (452)
T ss_dssp EECCTTSEEEEEEECSEEEEEEEEECCTTBCC-CSSCEEEEECTTTTT
T ss_pred EEeCCCCeEEECCCCCceEEEEEeeCCCCccc-CCCCEEEEEeCCccc
Confidence 358999999999999999999755 33 3220 012335777776653
Done!