Citrus Sinensis ID: 006928

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-----
MATMTSLIGLINKIQRACTVLGDHGGEGMSLWEALPSVAVVGGQSSGKSSVLESVVGRDFLPRGSGIVTRRPLVLQLHQTEGGTDYAEFLHAPRKKFTDFAAVRKEISDETDRITGKSKQISNIPIQLSIYSPNVVNLTLIDLPGLTKVAVEGQPESIVEDIENMVRSYVEKPSCIILAISPANQDIATSDAIKLAREVDPTGERTFGVLTKLDLMDKGTNALEVLEGRSYRLQHPWVGIVNRSQADINKNVDMIAARRKEREYFETSPEYGHLASKMGSEYLAKLLSQHLERVIRQRIPSIIALINKNIDEINAELDRIGRPIGVDSGAQLYTILEMCRAFERVFKEHLDGGRAGGDRIYGVFDHQLPAALKKLPFDRHLSTRNVQKVVSEADGYQPHLIAPEQGYRRLIDGSISYFKGPAEASVDAVHFVLKELVRKSIAETEELKRFPTLQSDIAAAATEALEKFRDESRKTVLRLVDMESSYLTVEFFRKLSEQPERSASDKNASDKNAPDRNAPPPGPQNPERFSDYHFRRIGSNVSGYIGMVCDTLKNSIPKAVVYCQVLAAKRSLLNQFYAHVGRQEKERLGKMLDEDPQLMDRRATLAKRLELYKSARDEIDAVAWK
cHHHHHHHHHHHHHHHHHHHHccccccccccccccccEEEEccccccccHHHccccccccccccccccccccEEEEEcccccccccEEEEcccccccccHHHHHHHHHHHHHHHHccccccccccEEEEEEcccccccccccccccCECccccccccHHHHHHHHHHHHHccccEEEEEEEccccccccHHHHHHHHHcccccccEEEcccccccccccccHHHHHHcccccccccEEEEEEccHHHHcccccHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHcccccccccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHccccccHHHHHHcccccccccccccccccccccccccccHHHHHHHcccccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
**T*TSLIGLINKIQRACTVLGDHGGEGMSLWEALPSVAVVGGQSSGKSSVLESVVGRDFLPRGSGIVTRRPLVLQLHQTEGGTDYAEFLHAPRKKFTDFAAVRKEIS**********KQISNIPIQLSIYSPNVVNLTLIDLPGLTKVAVEGQPESIVEDIENMVRSYVEKPSCIILAISPANQDIATSDAIKLAREVDPTGERTFGVLTKLDLMDKGTNALEVLEGRSYRLQHPWVGIVNRSQADINKNVDMIAARRKEREYFETSPEYGHLASKMGSEYLAKLLSQHLERVIRQRIPSIIALINKNIDEINAELDRIGRPIGVDSGAQLYTILEMCRAFERVFKEHLDGGRAGGDRIYGVFDHQLPAALKKLPFDRHLSTRNVQKVVSEADGYQPHLIAPEQGYRRLIDGSISYFKGPAEASVDAVHFVLKELVRKSIAETEELKRFPTLQSDIAAAATEALEKFRDESRKTVLRLVDMESSYLTVEFFRKLSEQPE**********************PQNPERFSDYHFRRIGSNVSGYIGMVCDTLKNSIPKAVVYCQVLAAKRSLLNQFYAHVGRQEKERLGKMLDEDPQLMDRRATLAKRLELYKSARDEIDAVAWK
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MATMTSLIGLINKIQRACTVLGDHGGEGMSLWEALPSVAVVGGQSSGKSSVLESVVGRDFLPRGSGIVTRRPLVLQLHQTEGGTDYAEFLHAPRKKFTDFAAVRKEISDETDRITGKSKQISNIPIQLSIYSPNVVNLTLIDLPGLTKVAVEGQPESIVEDIENMVRSYVEKPSCIILAISPANQDIATSDAIKLAREVDPTGERTFGVLTKLDLMDKGTNALEVLEGRSYRLQHPWVGIVNRSQADINKNVDMIAARRKEREYFETSPEYGHLASKMGSEYLAKLLSQHLERVIRQRIPSIIALINKNIDEINAELDRIGRPIGVDSGAQLYTILEMCRAFERVFKEHLDGGRAGGDRIYGVFDHQLPAALKKLPFDRHLSTRNVQKVVSEADGYQPHLIAPEQGYRRLIDGSISYFKGPAEASVDAVHFVLKELVRKSIAETEELKRFPTLQSDIAAAATEALEKFRDESRKTVLRLVDMESSYLTVEFFRKLSEQPERSASDKNASDKNAPDRNAPPPGPQNPERFSDYHFRRIGSNVSGYIGMVCDTLKNSIPKAVVYCQVLAAKRSLLNQFYAHVGRQEKERLGKMLDEDPQLMDRRATLAKRLELYKSARDEIDAVAWK

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Dynamin-related protein 1C Microtubule-associated force-producing protein that is targeted to the growing edges of the cell plate during cytokinesis. Plays also a major role in plasma membrane maintenance during pollen maturation.confidentQ8LF21
Dynamin-related protein 1D Putative microtubule-associated force-producing protein.probableQ8S3C9
Dynamin-related protein 1E Microtubule-associated force-producing protein that is targeted to the tubulo-vesicular network of the forming cell plate during cytokinesis. Plays also a major role in plasma membrane maintenance and cell wall integrity with an implication in vesicular trafficking, polar cell expansion, and other aspects of plant growth and development.probableQ9FNX5

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3T34, chain A
Confidence level:very confident
Coverage over the Query: 5-319
View the alignment between query and template
View the model in PyMOL
Template: 3ZVR, chain A
Confidence level:very confident
Coverage over the Query: 3-620
View the alignment between query and template
View the model in PyMOL