Query 006929
Match_columns 625
No_of_seqs 208 out of 1257
Neff 6.1
Searched_HMMs 29240
Date Mon Mar 25 12:41:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006929.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006929hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2e0w_A Gamma-glutamyltranspept 100.0 6E-150 2E-154 1253.7 53.1 529 65-625 17-556 (556)
2 2nlz_A Cephalosporin acylase; 100.0 2E-145 6E-150 1215.9 57.1 512 64-625 15-539 (547)
3 2i3o_A Gamma-glutamyltransfera 100.0 5E-142 2E-146 1181.9 46.9 502 64-625 4-515 (516)
4 2v36_A Gamma-glutamyltranspept 100.0 3E-101 1E-105 825.7 35.6 356 64-424 12-375 (376)
5 2qmc_A GGT, gamma-glutamyltran 100.0 5.3E-95 1.8E-99 775.3 34.7 333 65-400 28-368 (377)
6 2dg5_A Gamma-glutamyltranspept 100.0 3.2E-94 1.1E-98 768.4 31.0 334 63-399 15-356 (366)
7 3g9k_L Capsule biosynthesis pr 100.0 1.8E-89 6.2E-94 718.0 29.7 300 65-388 13-314 (323)
8 2dg5_B Gamma-glutamyltranspept 100.0 2.8E-60 9.4E-65 465.0 21.8 188 409-625 1-190 (190)
9 2qmc_B GGT, gamma-glutamyltran 100.0 3.8E-58 1.3E-62 448.9 20.6 184 409-619 1-187 (188)
10 2v36_B Gamma-glutamyltranspept 100.0 1.7E-57 5.7E-62 445.4 16.7 179 409-625 1-180 (193)
11 3g9k_S Capsule biosynthesis pr 100.0 1.1E-54 3.8E-59 420.6 19.3 171 409-623 1-174 (177)
12 1apy_A Aspartylglucosaminidase 90.4 0.43 1.5E-05 45.0 6.3 43 78-120 12-55 (162)
13 1k2x_A Putative L-asparaginase 84.6 1.1 3.8E-05 42.8 5.4 40 80-119 32-71 (177)
14 1p4k_A N(4)-(beta-N-acetylgluc 83.8 1.5 5E-05 45.2 6.3 46 74-120 7-56 (295)
15 2gez_A L-asparaginase alpha su 83.7 1.3 4.4E-05 43.0 5.5 40 80-119 35-74 (195)
16 4gdv_A L-asparaginase; NTN enz 83.2 1.2 4.1E-05 46.2 5.4 40 80-119 30-69 (310)
17 3c17_A L-asparaginase precurso 72.6 4 0.00014 42.5 5.5 40 80-119 32-71 (320)
18 2a8j_A Taspase 1, threonine as 68.6 5.3 0.00018 43.1 5.5 38 81-119 67-105 (420)
19 4gdv_A L-asparaginase; NTN enz 66.8 28 0.00097 35.9 10.4 26 405-430 166-191 (310)
20 1p4k_A N(4)-(beta-N-acetylgluc 66.6 31 0.001 35.4 10.5 26 405-430 148-173 (295)
21 3cuq_A Vacuolar-sorting protei 40.1 10 0.00036 37.6 1.7 72 207-289 23-103 (234)
22 1u5t_A Appears to BE functiona 38.5 18 0.00062 35.8 3.2 32 258-290 88-123 (233)
23 3c17_A L-asparaginase precurso 33.2 80 0.0027 32.6 7.2 26 405-430 174-199 (320)
24 1u5t_B Defective in vacuolar p 26.5 20 0.00068 33.7 1.1 27 260-287 11-46 (169)
25 1apy_B Aspartylglucosaminidase 26.0 54 0.0019 29.9 3.9 22 409-430 1-22 (141)
26 1k2x_B Putative L-asparaginase 25.0 59 0.002 29.7 3.9 22 409-430 1-22 (143)
27 3cuq_B Vacuolar protein-sortin 24.7 23 0.0008 34.6 1.3 28 259-287 71-102 (218)
28 2gez_B L-asparaginase beta sub 24.7 61 0.0021 29.3 3.9 22 409-430 1-22 (133)
29 3gxq_A Putative regulator of t 23.3 27 0.00092 25.6 1.0 16 78-93 34-49 (54)
30 2q6k_A Chlorinase; complex wit 21.7 45 0.0015 33.9 2.7 34 407-444 63-100 (283)
No 1
>2e0w_A Gamma-glutamyltranspeptidase; NTN hydrolase, precursor, gamma-GTP, post-translational PROC maturation, transferase; 2.55A {Escherichia coli K12} SCOP: d.153.1.6
Probab=100.00 E-value=6.4e-150 Score=1253.75 Aligned_cols=529 Identities=35% Similarity=0.552 Sum_probs=454.8
Q ss_pred CCcccccCeEEEcCChhHHHHHHHHHhcCCCHHHHHHHHHHHHHhhccCCCCCCCCceEEEEecCCCCEEEEEeecCccC
Q 006929 65 GDVVESEHGVVAADDGHCSEIGASTLRLGGHAVDAAVATALCLGVVNPMASGIGGGAFMVLRSSATSQTLAFDMRETAPQ 144 (625)
Q Consensus 65 ~~~~~~~~gaVas~~~~as~aG~~iL~~GGNAvDAAIAaa~~l~Vv~P~~sGiGGggf~lv~~~~~g~~~~id~re~AP~ 144 (625)
++++.+++|||||+||+||++|++||++||||||||||+++||+|||||+||||||+|||||+ +++++++|||||+||+
T Consensus 17 ~~~v~~~~g~Vas~~plAs~aG~~iL~~GGNAvDAAVA~~~~l~VveP~~sGiGGggf~lv~~-~~~~~~~id~re~AP~ 95 (556)
T 2e0w_A 17 FHPVRAKQGMVASVDATATQVGVDILKEGGNAVDAAVAVGYALAVTHPQAGNLGGGGFMLIRS-KNGNTTAIDFREMAPA 95 (556)
T ss_dssp SCCEEESSCEEEESSHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHCTTTCCSSSEEEEEEEC-TTSCEEEEEECCBCCC
T ss_pred cCceeccceEEECCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhhcccccCCCCCeEEEEEe-CCCCEEEEEeeccCcc
Confidence 455668999999999999999999999999999999999999999999999999999999997 7899999999999999
Q ss_pred CCChhhhccC-----ccccccCCCccccccHHHHHHHHHHhcCCCCHHHhHHHHHHHHhcCCccCHHHHHHHHHHHHHHh
Q 006929 145 AASQDMYEND-----TEAKYTGALSIGVPGEIAGLHEAWLKHGRLAWRALFQPAIKLAKEGFVVAPYLGQHIANKAEVIL 219 (625)
Q Consensus 145 ~a~~~~~~~~-----~~~~~~G~~sv~VPG~v~Gl~~a~~r~G~Lpw~~Ll~PAI~lA~~Gf~Vs~~la~~l~~~~~~l~ 219 (625)
+++.|||.+. +..+..|++||+|||+|+||+++|+|||||||++||+|||+|||+||+|++.++..|+...+.|.
T Consensus 96 ~at~d~~~~~~g~~~~~~~~~G~~av~VPG~v~g~~~a~~~~G~Lpw~~ll~PAI~lA~~Gf~V~~~la~~~~~~~~~l~ 175 (556)
T 2e0w_A 96 KATRDMFLDDQGNPDSKKSLTSHLASGTPGTVAGFSLALDKYGTMPLNKVVQPAFKLARDGFIVNDALADDLKTYGSEVL 175 (556)
T ss_dssp C--------------------CCCCCCBCCHHHHHHHHHHHHCSSCHHHHHHHHHHHHHHCEECCHHHHHHHHHTHHHHS
T ss_pred cCCHhHHhhccCCcCCccccCCccccccchhHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCcCCHHHHHHHHHhHHHhh
Confidence 9999999643 34457899999999999999999999999999999999999999999999999999998888899
Q ss_pred cCcccccccc-cCCcccCCCCeecCHHHHHHHHHHHHhCCCCcccchHHHHHHHHHHhcCCCCCHhhhccCcceEecCeE
Q 006929 220 NDRGLRQVFA-PNGKLLKSGDKCYNVELAQSLEALAEQGPEALYNGTVGEKLVKDVREAGGILTIEDLRSYKVDVMDAMS 298 (625)
Q Consensus 220 ~~p~~~~~f~-~~G~~~~~Gd~l~~p~LA~TL~~IA~~G~~~FY~G~iA~~iv~~~~~~GG~lt~~DL~~Y~~~~~~Pl~ 298 (625)
.+|+++++|+ |+|+++++||+|+||+||+|||+||++|+++||+|+||++|+++++++||+||++||++|+++|++||+
T Consensus 176 ~~p~~~~~f~~~~G~~~~~G~~~~~p~LA~TL~~IA~~G~~~FY~G~iA~~iv~~~~~~GG~lt~~DLa~y~~~~~~Pl~ 255 (556)
T 2e0w_A 176 PNHENSKAIFWKEGEPLKKGDTLVQANLAKSLEMIAENGPDEFYKGTIAEQIAQEMQKNGGLITKEDLAAYKAVERTPIS 255 (556)
T ss_dssp TTSHHHHHHHEETTEECCTTCEECCHHHHHHHHHHHHHCTHHHHHSHHHHHHHHHHHHSSCCCCHHHHHTCCCEEECCEE
T ss_pred cCchHHHhccCCCCccCCCCCEeeCHHHHHHHHHHHhhCcccccCCHHHHHHHHHHHHcCCCcCHHHHhhCCcceeCceE
Confidence 9999999998 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeCCeEEEecCCCCChHHHHHHHHHHHhcCCCCCC-CCChhHHHHHHHHHHHHHHHHH-hcCCCCCCCCchHHHhhCCH
Q 006929 299 ANAMGYTISGMPPPSSGTVGMSMILNIFDSYGSSDS-AKGNLGLHRLIEALKHMFAVRM-TLGDPKFVNNTNTLSEMLSP 376 (625)
Q Consensus 299 ~~~~g~~v~~~ppPssG~~~l~~~LniLe~~~~~~~-~~~~~~~H~lvEa~k~a~a~R~-~lgDP~f~~v~~~~~~lls~ 376 (625)
++|+||+||++||||||+++++++|||||+|++... .++++++|+++||+|+||+||. ++|||+|++++ +++|||+
T Consensus 256 ~~yrg~~v~~~pPpssGG~~~l~~L~iLe~~~~~~~~~~s~~~~H~~~EA~k~A~adR~~~lgDp~f~~vp--~~~Lls~ 333 (556)
T 2e0w_A 256 GDYRGYQVYSMPPPSSGGIHIVQILNILENFDMKKYGFGSADAMQIMAEAEKYAYADRSEYLGDPDFVKVP--WQALTNK 333 (556)
T ss_dssp EEETTEEEEECCTTBSSHHHHHHHHHHHHTSCSSSSCTTCHHHHHHHHHHHHHHHHHHGGGC-------CC--GGGGGCH
T ss_pred EEeCCeEEEECCCCCcHHHHHHHHHHHHhcCCccccCCchHHHHHHHHHHHHHHHHHHHHhcCCccccccc--HHHhcCH
Confidence 999999999999999998888899999999998753 4578999999999999999998 69999999886 7999999
Q ss_pred HHHHHHHhhcCCCCCCCCCccccccc-CCCCCCceEEEEEcCCCCEEEEEecCCCCCCceeeeCCcceeeecCCCCCCC-
Q 006929 377 SYAEQIQLKIFDNTTFPPDYYMYRWS-QLRDHGTSHFCIVDAERNAVSMTTTVNYAFGAGILSPSTGIVLNNEMDDFSI- 454 (625)
Q Consensus 377 ~~a~~~~~~I~~~~~~~~~~~~~~~~-~~~~~~Tth~sVvD~~GnaVS~T~Si~~~FGSgv~~p~tGi~lNN~m~dFs~- 454 (625)
+|+++++++|+++++.++.+|.+... ..+.++||||||+|++||+||+|+|||.+||||+++|+|||+|||+|+|||+
T Consensus 334 ~ya~~~~~~I~~~~a~~~~~~~~~~~~~~~~~~Tth~svvD~~GnaVS~t~Si~~~FGSgv~~p~tGi~lNN~~~dFs~~ 413 (556)
T 2e0w_A 334 AYAKSIADQIDINKAKPSSEIRPGKLAPYESNQATHYSVVDKDGNAVAVTYTLNTTFGTGIVAGESGILLNNQMDDFSAK 413 (556)
T ss_dssp HHHHHHHHHCCSSCCCCHHHHSCC--CCCCCSCCEEEEEECTTCCEEEEEEECSSTTTTSCBCGGGCCBCCCCC------
T ss_pred HHHHHHHHhcCccccCCccccCCCCCCCCCCCCCEEEEEEcCCCCEEEEeccCCCCcCCeEEcCCCceEecCCCCCcCCC
Confidence 99999999999988877655544321 1245899999999999999999999999999999999999999999999996
Q ss_pred CCCCCCCCCCCCCCCccCCCCCCCCCCcceeeeecCceeEEecCCCccchHHHHHHHHHHHHhcCCCHHHHhhCCccccc
Q 006929 455 PTEISPDKLPPAPANFIEPNKRPLSSMTPLIITKDNQLAGVIGGSGGMNIIPAVTQVFINHFILGMEPLAAVQNPRVYHK 534 (625)
Q Consensus 455 ~~~~n~~~~~p~~~N~i~PGKRP~ssm~PtIv~k~g~~~lv~Ga~GG~~i~~av~Qvl~~~l~~gm~l~~AI~aPR~~~~ 534 (625)
|+.+|.||++|+++|+|+|||||+|||+|+||+++|+++|++|+|||++|||+++|+|+|+++|||++||||++||||+|
T Consensus 414 pg~~n~~gl~~~~~N~i~PgKRP~ssm~Ptiv~~~g~~~l~~Gs~GG~~i~~~~~q~l~n~ld~gm~~q~Ai~aPR~~~~ 493 (556)
T 2e0w_A 414 PGVPNVYGLVGGDANAVGPNKRPLSSMSPTIVVKDGKTWLVTGSPGGSRIITTVLQMVVNSIDYGLNVAEATNAPRFHHQ 493 (556)
T ss_dssp ---------------------CCCBCCCCEEEEETTEEEEEECCCSTTHHHHHHHHHHHHHHTSCCCHHHHHHSCCEECC
T ss_pred CCCCccccCCCCcccccCCCCCccccCCCeEEEeCCcEEEEEECCChHHHHHHHHHHHHHHHhcCCCHHHHHhcCEEeec
Confidence 78889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCeEEEccccccCCCcCCCCHHHHHHHHHCCCeeEEecCcceEEEEEecccCCccccccccCccCccccCCCeEEEec
Q 006929 535 LIPNVVSYENWTVIDGDHIEISEESKLFLEKRGHQLKAKAGGAIVQFVVQTLQNPINRIRKIGKGIDNAQALHGILTAVS 614 (625)
Q Consensus 535 ~~p~~v~~E~~~~~~~~~~~~~~~~~~~L~~~Gh~v~~~~~~~~~q~i~~~~~~~~~~~~~~~~~~~~~~~~~G~l~a~s 614 (625)
+.|+.+.+|. ++++++++.|+++||+++....++.+|+|.++ .+|.++|++
T Consensus 494 ~~p~~~~~E~---------~~~~~~~~~L~~~Gh~v~~~~~~g~~qaI~~~--------------------~~g~~~g~s 544 (556)
T 2e0w_A 494 WLPDELRVEK---------GFSPDTLKLLEAKGQKVALKEAMGSTQSIMVG--------------------PDGELYGAS 544 (556)
T ss_dssp TTTTCEEECS---------CSCHHHHHHHHHTTCCEEECSCCCCCEEEEEC--------------------TTSCEEEEE
T ss_pred CCCCeEEECC---------CCCHHHHHHHHhCCCeeEEcCCCceEEEEEEe--------------------CCCeEEEEe
Confidence 9999999999 89999999999999999877667889999875 268899999
Q ss_pred cCCCCC-ccccC
Q 006929 615 DPRKDG-RPAAV 625 (625)
Q Consensus 615 DpR~~G-~a~g~ 625 (625)
||||+| .++||
T Consensus 545 DpR~~G~~a~g~ 556 (556)
T 2e0w_A 545 DPRSVDDLTAGY 556 (556)
T ss_dssp CTTSTTCEEEEC
T ss_pred CCCCCCCCCccC
Confidence 999998 68887
No 2
>2nlz_A Cephalosporin acylase; structural genomics, protein structure initiative, PSI, nysgxrc; 2.70A {Bacillus halodurans} SCOP: d.153.1.6
Probab=100.00 E-value=1.8e-145 Score=1215.92 Aligned_cols=512 Identities=28% Similarity=0.427 Sum_probs=476.1
Q ss_pred CCCcccccCeEEEcCChhHHHHHHHHHhcCCCHHHHHHHHHHHHHhhccCCCCCCCCceEEEEecCCCCEEEEEeecCcc
Q 006929 64 YGDVVESEHGVVAADDGHCSEIGASTLRLGGHAVDAAVATALCLGVVNPMASGIGGGAFMVLRSSATSQTLAFDMRETAP 143 (625)
Q Consensus 64 ~~~~~~~~~gaVas~~~~as~aG~~iL~~GGNAvDAAIAaa~~l~Vv~P~~sGiGGggf~lv~~~~~g~~~~id~re~AP 143 (625)
.|+.+.+++|||||+||+||++|++||++||||||||||+++||+||||++||||||+|||||++ + ++++||+||+||
T Consensus 15 ~r~~v~~~~g~Vas~~plAs~aG~~iL~~GGNAvDAAVA~~~~l~VveP~~sGiGGggf~lv~~~-~-~~~~id~re~AP 92 (547)
T 2nlz_A 15 RRNVVYAKNGMVATSQPLAAQAGLDILKAGGNAIDAAIATATALTVLEPTSNGIGSDAFALVWTK-G-KLHGLNGSGRAP 92 (547)
T ss_dssp CCCCEEESSEEEEESSHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHCTTSCCTBCEEEEEEEET-T-EEEEEEECCCCC
T ss_pred CCCccccCCeEEECCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCCCCceEEEEEEC-C-ceEEEecccCCc
Confidence 45677889999999999999999999999999999999999999999999999999999999975 4 899999999999
Q ss_pred CCCChhhhccCc---cccccCCCccccccHHHHHHHHHHhcCCCCHHHhHHHHHHHHhcCCccCHHHHHHHHHHHHHHhc
Q 006929 144 QAASQDMYENDT---EAKYTGALSIGVPGEIAGLHEAWLKHGRLAWRALFQPAIKLAKEGFVVAPYLGQHIANKAEVILN 220 (625)
Q Consensus 144 ~~a~~~~~~~~~---~~~~~G~~sv~VPG~v~Gl~~a~~r~G~Lpw~~Ll~PAI~lA~~Gf~Vs~~la~~l~~~~~~l~~ 220 (625)
++++++||.+.. ..+..|++||+|||+|+||+++|+|||||||++||+|||+|||+||+|++.++..|+...+.|.+
T Consensus 93 ~~a~~~~~~~~g~~~~~~~~G~~av~VPG~v~g~~~a~~~~G~Lpw~~ll~PAI~lA~~Gf~Vs~~la~~~~~~~~~l~~ 172 (547)
T 2nlz_A 93 MSLTMEAVKAKGYEQELPPYGVIPVTVPGAPGAWAELAKMYGNLPLAASLAPAIRYAEEGYPVTPTLAKYWKAAYDRVKT 172 (547)
T ss_dssp TTCCHHHHHTTTCCSSCCSSSSTTCCCCCHHHHHHHHHHHHCSSCHHHHTHHHHHHHHHCEECCHHHHHHHHHHHHHHHH
T ss_pred ccCCHHHHhhcCCCccCCCCCCcccccchHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCccCHHHHHHHHHHHHHHhc
Confidence 999999997542 46789999999999999999999999999999999999999999999999999999988888888
Q ss_pred Ccc------cccccccCCcccCCCCeecCHHHHHHHHHHHHhCCCCcccchHHHHHHHHHHhcCCCCCHhhhccCcceEe
Q 006929 221 DRG------LRQVFAPNGKLLKSGDKCYNVELAQSLEALAEQGPEALYNGTVGEKLVKDVREAGGILTIEDLRSYKVDVM 294 (625)
Q Consensus 221 ~p~------~~~~f~~~G~~~~~Gd~l~~p~LA~TL~~IA~~G~~~FY~G~iA~~iv~~~~~~GG~lt~~DL~~Y~~~~~ 294 (625)
+|+ ++++|+|+|+++++||+|+||+||+|||+||++|+++||+|+||++|+++++++||+||++||++|+++|+
T Consensus 173 ~p~~~~~~~~~~~f~~~G~~~~~G~~~~~p~LA~TL~~IA~~G~~~FY~G~iA~~iv~~~~~~GG~lt~~DLa~y~~~~~ 252 (547)
T 2nlz_A 173 EWTDDVYQPWFDTFAPKGRAPRVGEVWRSQGHADTLRSIAESNGESFYRGELADQIHAFFDKHGGYLTKEDLACYRPEWV 252 (547)
T ss_dssp HCCSSTTHHHHHHHCTTSSCCCTTCEECCHHHHHHHHHHHTTTTHHHHHSHHHHHHHHHHHHTTCCCCHHHHHTCCCEEE
T ss_pred CCcccchhhHHHHcccCCccCCCCCEecCHHHHHHHHHHHHhCchhhcCCHHHHHHHHHHHhcCCCCCHHHHhhCCceee
Confidence 898 99999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCeEeeeCCeEEEecCCCCChHHHHHHHHHHHhcCCCCCCCCChhHHHHHHHHHHHHHHHHH-hcCCCCCCCCchHHHhh
Q 006929 295 DAMSANAMGYTISGMPPPSSGTVGMSMILNIFDSYGSSDSAKGNLGLHRLIEALKHMFAVRM-TLGDPKFVNNTNTLSEM 373 (625)
Q Consensus 295 ~Pl~~~~~g~~v~~~ppPssG~~~l~~~LniLe~~~~~~~~~~~~~~H~lvEa~k~a~a~R~-~lgDP~f~~v~~~~~~l 373 (625)
+||+++|+||+||++||||||.+ ++++|||||+|++.. .++++++|+++||+|+||+||. ++|||+|++++ +++|
T Consensus 253 ~Pl~~~yrg~~v~~~pPps~G~~-~l~~L~iLe~~~l~~-~~s~~~~H~~~EA~k~A~adR~~~lgDp~f~~vp--~~~L 328 (547)
T 2nlz_A 253 EPISIDYRGYRVWEIPPNGQGLV-ALEALNIVKGFEFYH-KDTVDTYHKQIEAMKLAFVDGMKYVTEPSDMSVS--VEQL 328 (547)
T ss_dssp CCEEEEETTEEEEECCTTBTTHH-HHHHHHHHTTSCCSC-SSSHHHHHHHHHHHHHHHHHHHHHCSSGGGCSSC--HHHH
T ss_pred CCeEEEeCCceEEECCCCcHHHH-HHHHHHHHhcCCCCC-CCcHHHHHHHHHHHHHHHHHHHHhcCCccccccc--HHHh
Confidence 99999999999999999999966 569999999999876 6678999999999999999997 79999999987 7999
Q ss_pred CCHHHHHHHHhhcCCCCCCCCCcccccccCCCCCCceEEEEEcCCCCEEEEEecCCCCCCceeeeCCcceeeecCCCCCC
Q 006929 374 LSPSYAEQIQLKIFDNTTFPPDYYMYRWSQLRDHGTSHFCIVDAERNAVSMTTTVNYAFGAGILSPSTGIVLNNEMDDFS 453 (625)
Q Consensus 374 ls~~~a~~~~~~I~~~~~~~~~~~~~~~~~~~~~~Tth~sVvD~~GnaVS~T~Si~~~FGSgv~~p~tGi~lNN~m~dFs 453 (625)
||++|+++++++|+++ +.++.+.. .++++||||||+|++||+||+|+|+|..||||+++|+|||+|||+|++|+
T Consensus 329 ls~~ya~~~~~~I~~~-a~~~~~~~-----p~~~~Tth~svvD~~GnaVS~t~Si~~~FGSgv~~pgtGi~LNN~~~~Fs 402 (547)
T 2nlz_A 329 LSDEYATERRKEIGEQ-ALTPEPGT-----PPRGGTVYLATADGDGNMVSFIQSNYMGFGSGVVVPGTGIAMQNRGHNFS 402 (547)
T ss_dssp TCHHHHHHHHTTCCSS-CCCCCCCC-----C----CEEEEEEETTSCEEEEEEECSSTTCSSCEETTTTEEBCCGGGGSB
T ss_pred cCHHHHHHHHHhcccc-cCCCCCCC-----CCCCCCEEEEEEcCCCCEEEEEccCCCccCCeeecCCceEEeeCCCCCCC
Confidence 9999999999999987 55443221 24579999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCccCCCCCCCCCCcceeeeecCceeEEecCCCccchHHHHHHHHHHHHhcCCCHHHHhhCCcccc
Q 006929 454 IPTEISPDKLPPAPANFIEPNKRPLSSMTPLIITKDNQLAGVIGGSGGMNIIPAVTQVFINHFILGMEPLAAVQNPRVYH 533 (625)
Q Consensus 454 ~~~~~n~~~~~p~~~N~i~PGKRP~ssm~PtIv~k~g~~~lv~Ga~GG~~i~~av~Qvl~~~l~~gm~l~~AI~aPR~~~ 533 (625)
+ .|+++|+|+|||||+|||+|+||+++|+++|++|+|||++|||+++|+|+|+++|||++||||++||||+
T Consensus 403 ~---------~p~~~N~i~PgKRP~ssm~Ptiv~~~g~~~l~~Gs~GG~~i~~~~~qvl~n~ld~gm~~q~Ai~aPR~~~ 473 (547)
T 2nlz_A 403 L---------DPNHDNALKPGKRTYHTIIPGFLTKNDQPIGPFGVMGGFMQPQGHMQVMMNTIDFGLNPQAALDAPRWQW 473 (547)
T ss_dssp C---------CTTSTTBCCTTCCCCBCCCCEEEEESSCEEEEEEECSGGGHHHHHHHHHHHHHTTCCCHHHHHHSCCEEE
T ss_pred C---------CCCCCCcCCCCCccccCCCCeEEEeCCceEEEEECCchHHHHHHHHHHHHHHHhcCCCHHHHHhCCEeee
Confidence 6 3568999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCeEEEccccccCCCcCCCCHHHHHHHHHCCCeeEEecC---cceEEEEEecccCCccccccccCccCccccCCCeE
Q 006929 534 KLIPNVVSYENWTVIDGDHIEISEESKLFLEKRGHQLKAKAG---GAIVQFVVQTLQNPINRIRKIGKGIDNAQALHGIL 610 (625)
Q Consensus 534 ~~~p~~v~~E~~~~~~~~~~~~~~~~~~~L~~~Gh~v~~~~~---~~~~q~i~~~~~~~~~~~~~~~~~~~~~~~~~G~l 610 (625)
| .++.+.+|+ ++++++++.|+++||+++.... ++.+|+|.+++ .+|.+
T Consensus 474 ~-~~~~~~~E~---------~~~~~~~~~L~~~Gh~v~~~~~~~~~g~~qaI~~~~-------------------~~g~~ 524 (547)
T 2nlz_A 474 T-NGKQVQVEP---------TFPVDIAQALVRRGHKIQVVLDEGAFGRGQIIWRDP-------------------TTGVL 524 (547)
T ss_dssp C-SSSEEEECT---------TSCHHHHHHHHHTTCEEEECCCTTTTCCEEEEEECT-------------------TTCCE
T ss_pred c-CCCeEEecC---------CCCHHHHHHHHHCCCeeEeccCCCcCcEEEEEEEEC-------------------CCCEE
Confidence 8 568999999 8999999999999999987664 68999998751 25889
Q ss_pred EEeccCCCCCccccC
Q 006929 611 TAVSDPRKDGRPAAV 625 (625)
Q Consensus 611 ~a~sDpR~~G~a~g~ 625 (625)
+|++||||+|.++||
T Consensus 525 ~g~sDpR~~G~a~g~ 539 (547)
T 2nlz_A 525 AGGTEPRTDGQVAAW 539 (547)
T ss_dssp EEEECTTSSCEEEEC
T ss_pred EEEeCCCCCCeEEee
Confidence 999999999999886
No 3
>2i3o_A Gamma-glutamyltransferase related protein; structural genomics, PSI, protein structure initiative; 2.03A {Thermoplasma acidophilum} SCOP: d.153.1.6
Probab=100.00 E-value=5e-142 Score=1181.94 Aligned_cols=502 Identities=24% Similarity=0.369 Sum_probs=456.9
Q ss_pred CCCcccccCeEEEcCChhHHHHHHHHHhcCCCHHHHHHHHHHHHHhhccCCCCCCCCceEEEEecCCCCEEEEEeecCcc
Q 006929 64 YGDVVESEHGVVAADDGHCSEIGASTLRLGGHAVDAAVATALCLGVVNPMASGIGGGAFMVLRSSATSQTLAFDMRETAP 143 (625)
Q Consensus 64 ~~~~~~~~~gaVas~~~~as~aG~~iL~~GGNAvDAAIAaa~~l~Vv~P~~sGiGGggf~lv~~~~~g~~~~id~re~AP 143 (625)
.|+.+.+++|||+|+||+||++|++||++||||||||||+++||+|||||+||||||+|||||++ ++++++||+||+||
T Consensus 4 ~r~~~~~~~g~Vas~~~lAs~aG~~iL~~GGNAvDAAVA~~~~l~VveP~~~GiGGggf~lv~~~-~~~~~~id~r~~AP 82 (516)
T 2i3o_A 4 SRPNALSQRSVIASSSELASLAGRDILKRGGNIFDAALAVSAMLCVTQNNLCGLGGDLFALIRDE-NGQIMDLNGSGQAS 82 (516)
T ss_dssp SSCCEEESSEEEEESBHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHSTTSCCTTSEEEEEEECT-TCCEEEEEECCCBC
T ss_pred CCCccccCCeEEECCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCCCCceEEEEEeC-CCcEEEEECCcCCc
Confidence 46678889999999999999999999999999999999999999999999999999999999976 78999999999999
Q ss_pred CCCChhhhccC--ccccccCCCc-cccccHHHHHHHHHHhcCCCCHHHhHHHHHHHHhcCCccCHHHHHHHHHHHHHHhc
Q 006929 144 QAASQDMYEND--TEAKYTGALS-IGVPGEIAGLHEAWLKHGRLAWRALFQPAIKLAKEGFVVAPYLGQHIANKAEVILN 220 (625)
Q Consensus 144 ~~a~~~~~~~~--~~~~~~G~~s-v~VPG~v~Gl~~a~~r~G~Lpw~~Ll~PAI~lA~~Gf~Vs~~la~~l~~~~~~l~~ 220 (625)
++++++||.+. ...+..|++| |+|||+|+||+++|+|||||||++||+|||+|||+||+|++.++..|+...+.|.+
T Consensus 83 ~~a~~~~~~~~g~~~~~~~G~~a~v~VPG~v~g~~~a~~~~G~Lpw~~ll~PAI~lA~~Gf~Vs~~la~~~~~~~~~l~~ 162 (516)
T 2i3o_A 83 RAVSIDYYESMGLTKIPERGPYAAITVPGIAGSWDEIFRKFATMDIADILEPAIRTASAGFPITQNYSDSIARSAPVIGQ 162 (516)
T ss_dssp TTCCHHHHHTTTCSSCCSSSTTTCCBCCCHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHCEECCHHHHHHHHHHHHHHTT
T ss_pred ccCCHHHHhhcCCCcCCCCCCcccCcCchHHHHHHHHHHHhCCCCHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHhhc
Confidence 99999999653 3567899999 99999999999999999999999999999999999999999999999988888999
Q ss_pred CcccccccccCCcccCCCCeecCHHHHHHHHHHHHhCCCCcccchHHHHHHHHHHhcCCCCCHhhhccCcceEecCeEee
Q 006929 221 DRGLRQVFAPNGKLLKSGDKCYNVELAQSLEALAEQGPEALYNGTVGEKLVKDVREAGGILTIEDLRSYKVDVMDAMSAN 300 (625)
Q Consensus 221 ~p~~~~~f~~~G~~~~~Gd~l~~p~LA~TL~~IA~~G~~~FY~G~iA~~iv~~~~~~GG~lt~~DL~~Y~~~~~~Pl~~~ 300 (625)
+|+++++|+|+|+++++||+|+||+||+|||+||++|+++||+|+||++|+++++++||+||++||++|+++|++||+++
T Consensus 163 ~~~~~~~f~~~G~~~~~G~~~~~p~LA~TL~~IA~~G~~~FY~G~iA~~iv~~~~~~GG~lt~~DLa~y~~~~~~Pl~~~ 242 (516)
T 2i3o_A 163 YRGWSSIFMPNGSVPVAGEILKQPDLAESFRLMSEEGFRSFYDGSLADIIIAGLEGTGSPLSDRDLRVYRPLIGKPVFTD 242 (516)
T ss_dssp CHHHHHHHSTTSSCCCTTCEECCHHHHHHHHHHHHHCTTHHHHSHHHHHHHHTTTTTCCCCCHHHHHHCCCEEECCEEEE
T ss_pred ChhHHhhhccCCccCCCCCEecCHHHHHHHHHHHhhCcccccCCHHHHHHHHHHHHcCCCCCHHHHhhCCcceeCceEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCeEEEecCCCCChHHHHHHHHHHHhcCCCCCCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCCCchHHHhhCCHHHHH
Q 006929 301 AMGYTISGMPPPSSGTVGMSMILNIFDSYGSSDSAKGNLGLHRLIEALKHMFAVRMTLGDPKFVNNTNTLSEMLSPSYAE 380 (625)
Q Consensus 301 ~~g~~v~~~ppPssG~~~l~~~LniLe~~~~~~~~~~~~~~H~lvEa~k~a~a~R~~lgDP~f~~v~~~~~~lls~~~a~ 380 (625)
|+||+||++||||||.+ ++++|||||+|++.....+++++|+++||+|+||+||.++|||+|++++ +++| +|++
T Consensus 243 yrg~~v~~~pPps~G~~-~l~~L~iLe~~~~~~~~~~~~~~H~~~EA~k~A~adR~~lgDp~f~~vp--~~~L---~y~~ 316 (516)
T 2i3o_A 243 LDEFRIYETSPNSQGIT-VIEWIRGMESHGYDSRTMWEAKIEDIFETMEEAYDKRRKITDPSYMNIA--QHDS---ANGK 316 (516)
T ss_dssp ETTEEEEECCTTBTTHH-HHHHHHHHHHTTCCTTTGGGCCHHHHHHHHHHHHHHHTTCCCGGGTC---------------
T ss_pred eCCeEEEECCCCcHHHH-HHHHHHhhhcCCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCccccccc--hHHH---HHHH
Confidence 99999999999999966 5699999999998755556789999999999999999999999999886 6777 7887
Q ss_pred HHHhhcCCCCCCCCCcccccccCCCCCCceEEEEEcCCCCEEEEEecCCCCCCceeeeCCcceeeecCCCCCCCCCCCCC
Q 006929 381 QIQLKIFDNTTFPPDYYMYRWSQLRDHGTSHFCIVDAERNAVSMTTTVNYAFGAGILSPSTGIVLNNEMDDFSIPTEISP 460 (625)
Q Consensus 381 ~~~~~I~~~~~~~~~~~~~~~~~~~~~~Tth~sVvD~~GnaVS~T~Si~~~FGSgv~~p~tGi~lNN~m~dFs~~~~~n~ 460 (625)
+ +++.++. ..++++||||||+|++||+||+|+|+|..||||+++|+|||+|||+|+||++
T Consensus 317 ~-------~~a~~~~-------~~~~~~Tth~svvD~~GnaVS~t~Si~~~FGSgv~~p~tGi~lnN~~~~Fs~------ 376 (516)
T 2i3o_A 317 K-------DGLPKRD-------HNDIGDTTYFSISDSEGRSVSIIQSNYMGFGSGIVPKGTGFVLQNRGSYFTL------ 376 (516)
T ss_dssp ---------CCCBCC-------SCCCCEEEEEEEEETTSCEEEEEEEEESTTCSSCCCTTSCCCCCCGGGGSBC------
T ss_pred h-------ccccCCC-------CCCCCCCEEEEEEcCCCCEEEEeccCCCCcCCeeeeCCCceEEeCCCCccCC------
Confidence 7 1222221 1145799999999999999999999999999999999999999999999996
Q ss_pred CCCCCCCCCccCCCCCCCCCCcceeeeecCceeEEecCCCccchHHHHHHHHHHHHhcCCCHHHHhhCCcccc----ccC
Q 006929 461 DKLPPAPANFIEPNKRPLSSMTPLIITKDNQLAGVIGGSGGMNIIPAVTQVFINHFILGMEPLAAVQNPRVYH----KLI 536 (625)
Q Consensus 461 ~~~~p~~~N~i~PGKRP~ssm~PtIv~k~g~~~lv~Ga~GG~~i~~av~Qvl~~~l~~gm~l~~AI~aPR~~~----~~~ 536 (625)
.|+++|+|+|||||+|||+|+||+++|+++|++|+|||++|||+++|+|+|+++|||++||||++||||+ |+.
T Consensus 377 ---~p~~~N~i~PgKRP~ssm~Ptiv~~~g~~~l~~Gs~GG~~i~~~~~q~l~n~ld~gm~~q~Ai~aPR~~~~~~~~~~ 453 (516)
T 2i3o_A 377 ---QRDHPNALMPGKRTFHTLAACMVEKEHDLYASLGSMGGDIQPQVQMQILMEILKDNTDPQAILDKPRWTEPYTIYEA 453 (516)
T ss_dssp ---CTTSTTBCCTTCCCCBCCCCEEEEETTEEEEEEEECCSTTHHHHHHHHHHHHTTCCSCHHHHHHSCCEECCCCTTSB
T ss_pred ---CCCCCCcCCCCCCcccCCCCeEEEeCCceEEEEECCCcHHHHHHHHHHHHHHHhcCCCHHHHHhCCEEeeccccCCC
Confidence 3568999999999999999999999999999999999999999999999999999999999999999998 667
Q ss_pred CCeEEEccccccCCCcCCCCHHHHHHHHHCCCeeEEecC---cceEEEEEecccCCccccccccCccCccccCCCeEEEe
Q 006929 537 PNVVSYENWTVIDGDHIEISEESKLFLEKRGHQLKAKAG---GAIVQFVVQTLQNPINRIRKIGKGIDNAQALHGILTAV 613 (625)
Q Consensus 537 p~~v~~E~~~~~~~~~~~~~~~~~~~L~~~Gh~v~~~~~---~~~~q~i~~~~~~~~~~~~~~~~~~~~~~~~~G~l~a~ 613 (625)
|+.+.+|+. ++++++++.| +||+++.... .+.+|+|.++ ++|.++|+
T Consensus 454 ~~~~~~E~~--------~~~~~~~~~L--~Gh~v~~~~~~~~~g~~qaI~~~--------------------~~g~~~g~ 503 (516)
T 2i3o_A 454 PGAVYVESE--------ELYRNVSKQI--SGRKVVLRDVSQEFGTAQITTLI--------------------RGDVVVGA 503 (516)
T ss_dssp CCCEEESSH--------HHHHHHHHHS--CSCCEEECCSSGGGCCEEEEEEE--------------------GGGEEEEE
T ss_pred CCeEEEecC--------CCCHHHHHHh--CCCEEEecCCCCcCceEEEEEEe--------------------CCCeEEEE
Confidence 889999972 4789999999 9999987653 6889999875 26889999
Q ss_pred ccCCCCCccccC
Q 006929 614 SDPRKDGRPAAV 625 (625)
Q Consensus 614 sDpR~~G~a~g~ 625 (625)
+||||+|.++||
T Consensus 504 sDpR~~G~a~g~ 515 (516)
T 2i3o_A 504 ADPRGDGIAIPY 515 (516)
T ss_dssp ECTTTBCEEEEE
T ss_pred eCCCCCCeeeee
Confidence 999999999886
No 4
>2v36_A Gamma-glutamyltranspeptidase large chain; transferase, glutathione biosynthesis, gamma-glutamyl transferase, acyltransferase, zymogen; 1.85A {Bacillus subtilis} PDB: 3a75_A*
Probab=100.00 E-value=3.1e-101 Score=825.68 Aligned_cols=356 Identities=33% Similarity=0.531 Sum_probs=320.3
Q ss_pred CCCcccccCeEEEcCChhHHHHHHHHHhcCCCHHHHHHHHHHHHHhhccCCCCCCCCceEEEEecCCCCEEEEEeecCcc
Q 006929 64 YGDVVESEHGVVAADDGHCSEIGASTLRLGGHAVDAAVATALCLGVVNPMASGIGGGAFMVLRSSATSQTLAFDMRETAP 143 (625)
Q Consensus 64 ~~~~~~~~~gaVas~~~~as~aG~~iL~~GGNAvDAAIAaa~~l~Vv~P~~sGiGGggf~lv~~~~~g~~~~id~re~AP 143 (625)
.+++..+++|||+|+||+||++|++||++||||||||||+++||+|||||+||||||+|||||+++++++++|||||+||
T Consensus 12 ~~~~~~~~~g~Vas~~~lAs~aG~~iL~~GGNAvDAAVA~a~~l~VveP~~sGiGGggf~li~~~~~~~~~~id~re~AP 91 (376)
T 2v36_A 12 YKQVDVGKDGMVATAHPLASEIGADVLKKGGNAIDAAVAIQFALNVTEPMMSGIGGGGFMMVYDGKTKDTTIIDSRERAP 91 (376)
T ss_dssp CCSBC-CCSEEEEBSSHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHSTTTCSTTSEEEEEEECTTTCCEEEEECCCBCC
T ss_pred cCCccccCCeEEECCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCCCCCeEEEEEECCCCcEEEEEeeccCc
Confidence 34556789999999999999999999999999999999999999999999999999999999987889999999999999
Q ss_pred CCCChhhhccC--ccc----cccCCCccccccHHHHHHHHHHhcCCCCHHHhHHHHHHHHhcCCccCHHHHHHHHHHHHH
Q 006929 144 QAASQDMYEND--TEA----KYTGALSIGVPGEIAGLHEAWLKHGRLAWRALFQPAIKLAKEGFVVAPYLGQHIANKAEV 217 (625)
Q Consensus 144 ~~a~~~~~~~~--~~~----~~~G~~sv~VPG~v~Gl~~a~~r~G~Lpw~~Ll~PAI~lA~~Gf~Vs~~la~~l~~~~~~ 217 (625)
++++.+||.+. ... +..|+++|+|||+|+||+++|+|||||||++||+|||+|||+||+|++.++..|+...+.
T Consensus 92 ~~a~~~~~~~~~g~~~~~~~~~~G~~av~VPG~v~g~~~a~~~~G~Lpw~~ll~PAI~lA~~Gf~Vs~~la~~~~~~~~~ 171 (376)
T 2v36_A 92 AGATPDMFLDENGKAIPFSERVTKGTAVGVPGTLKGLEEALDKWGTRSMKQLITPSIKLAEKGFPIDSVLAEAISDYQEK 171 (376)
T ss_dssp TTCCTTTTBCSSSCBCCHHHHTTSGGGCCBCCHHHHHHHHHHHHCSSCHHHHHHHHHHHHHHCEECCHHHHHHHHHTHHH
T ss_pred ccCCHhHhhhccCCcCCcccccCCCccccCchHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCcCCHHHHHHHHHHHHH
Confidence 99999999742 122 368999999999999999999999999999999999999999999999999999988888
Q ss_pred HhcCcccccccccCCcccCCCCeecCHHHHHHHHHHHHhCCCCcccchHHHHHHHHHHhcCCCCCHhhhccCcceEecCe
Q 006929 218 ILNDRGLRQVFAPNGKLLKSGDKCYNVELAQSLEALAEQGPEALYNGTVGEKLVKDVREAGGILTIEDLRSYKVDVMDAM 297 (625)
Q Consensus 218 l~~~p~~~~~f~~~G~~~~~Gd~l~~p~LA~TL~~IA~~G~~~FY~G~iA~~iv~~~~~~GG~lt~~DL~~Y~~~~~~Pl 297 (625)
|.+ |+++++|+|+|+++++||+|+||+||+|||+||++|+++||+|+||++|+++++++||+||++||++|+++|++||
T Consensus 172 l~~-~~~~~~f~~~G~~~~~G~~~~~p~LA~TL~~IA~~G~~~FY~G~iA~~iv~~~~~~GG~lt~~DLa~y~~~~~~Pl 250 (376)
T 2v36_A 172 LSR-TAAKDVFLPNGEPLKEGDTLIQKDLAKTFKLIRSKGTDAFYKGKFAKTLSDTVQDFGGSMTEKDLENYDITIDEPI 250 (376)
T ss_dssp HTT-STTHHHHSTTSSCCCTTCEECCHHHHHHHHHHHHHCTHHHHSHHHHHHHHHHHHHTTCCCCHHHHHHCCCEEECCE
T ss_pred hcC-hhHHHHhccCCccCCCCCEEECHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHcCCCCCHHHHhhCCcceeCce
Confidence 888 9999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeeeCCeEEEecCCCCChHHHHHHHHHHHhcCCCCCC-CCChhHHHHHHHHHHHHHHHHH-hcCCCCCCCCchHHHhhCC
Q 006929 298 SANAMGYTISGMPPPSSGTVGMSMILNIFDSYGSSDS-AKGNLGLHRLIEALKHMFAVRM-TLGDPKFVNNTNTLSEMLS 375 (625)
Q Consensus 298 ~~~~~g~~v~~~ppPssG~~~l~~~LniLe~~~~~~~-~~~~~~~H~lvEa~k~a~a~R~-~lgDP~f~~v~~~~~~lls 375 (625)
+++|+||+||++||||||+++++++|||||+|++... .++++++|+++||+|+||++|. ++|||+|++++ +++|||
T Consensus 251 ~~~yrg~~v~~~pPPssGG~~~l~~L~iLe~~~~~~~~~~s~~~~H~~~EA~k~A~adR~~~lgDp~f~~vp--~~~Lls 328 (376)
T 2v36_A 251 WGDYQGYQIATTPPPSSGGIFLLQMPKILDHFNLSQYDVRSWEKYQLLAETMHLSYADRASYAGDPEFVNVP--LKGLLH 328 (376)
T ss_dssp EEEETTEEEEECCTTBSHHHHHHHHHHHHHTTCCC--CTTCHHHHHHHHHHHHHHHHHHHHHCSCTTTSCCC--HHHHHC
T ss_pred EEEeCCeEEEECCCCCcHHHHHHHHHHHHhcCCccccCCCcHHHHHHHHHHHHHHHHHHHHhcCCcccccCC--HHHhcC
Confidence 9999999999999999998888899999999998753 4678999999999999999998 69999999987 799999
Q ss_pred HHHHHHHHhhcCCCCCCCCCcccccccCCCCCCceEEEEEcCCCCEEEE
Q 006929 376 PSYAEQIQLKIFDNTTFPPDYYMYRWSQLRDHGTSHFCIVDAERNAVSM 424 (625)
Q Consensus 376 ~~~a~~~~~~I~~~~~~~~~~~~~~~~~~~~~~Tth~sVvD~~GnaVS~ 424 (625)
++|+++++++|++ +.++.+|.+..+...+++||||||+|++||+||.
T Consensus 329 ~~y~~~~~~~I~~--~~~~~~~~~~~~~~~~~~Tth~svvD~~GnaVS~ 375 (376)
T 2v36_A 329 PDYIKERQQLINL--DQVNKKPKAGDPWKYQEGSANYKQVEQPKDKVEG 375 (376)
T ss_dssp HHHHHHHHHTCBT--TBCCSSCCCCCGGGGSSSCCSSCCCCC-------
T ss_pred HHHHHHHHHhccc--cccccccCCCCCCCCCCCCEEEEEEcCCCCeEeC
Confidence 9999999999998 4444444433221224899999999999999985
No 5
>2qmc_A GGT, gamma-glutamyltranspeptidase; NTN-hydrolase, transferase; HET: GTB; 1.55A {Helicobacter pylori} PDB: 2qm6_A* 3fnm_A* 2nqo_A
Probab=100.00 E-value=5.3e-95 Score=775.28 Aligned_cols=333 Identities=32% Similarity=0.513 Sum_probs=313.0
Q ss_pred CCcccccCeEEEcCChhHHHHHHHHHhcCCCHHHHHHHHHHHHHhhccCCCCCCCCceEEEEecCCCCEEEEEeecCccC
Q 006929 65 GDVVESEHGVVAADDGHCSEIGASTLRLGGHAVDAAVATALCLGVVNPMASGIGGGAFMVLRSSATSQTLAFDMRETAPQ 144 (625)
Q Consensus 65 ~~~~~~~~gaVas~~~~as~aG~~iL~~GGNAvDAAIAaa~~l~Vv~P~~sGiGGggf~lv~~~~~g~~~~id~re~AP~ 144 (625)
.+...+++|||+|+||+||++|++||++||||||||||+++||+||||++||||||+|||||+ +++++++|||||+||+
T Consensus 28 ~p~~~~~~g~Vas~~plAs~aG~~IL~~GGNAvDAAVAaa~~L~VveP~~sGiGGggF~li~~-~~~~~~~id~re~AP~ 106 (377)
T 2qmc_A 28 PPIKNTKVGLALSSHPLASEIGQKVLEEGGNAIDAAVAIGFALAVVHPAAGNIGGGGFAVIHL-ANGENVALDFREKAPL 106 (377)
T ss_dssp --CEESSSEEEECSSHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHCTTTCCSSSEEEEEEEC-TTSCEEEEEECCBCCT
T ss_pred CCccccCceEEECCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCCCCCeEEEEEe-CCCCEEEEEeeccCcc
Confidence 345668899999999999999999999999999999999999999999999999999999997 7899999999999999
Q ss_pred CCChhhhccC-----ccccccCCCccccccHHHHHHHHHHhcCCCCHHHhHHHHHHHHhcCCccCHHHHHHHHHHHHHHh
Q 006929 145 AASQDMYEND-----TEAKYTGALSIGVPGEIAGLHEAWLKHGRLAWRALFQPAIKLAKEGFVVAPYLGQHIANKAEVIL 219 (625)
Q Consensus 145 ~a~~~~~~~~-----~~~~~~G~~sv~VPG~v~Gl~~a~~r~G~Lpw~~Ll~PAI~lA~~Gf~Vs~~la~~l~~~~~~l~ 219 (625)
+++.|||.+. +..+..|+++|+|||+|+||+++|+|||||||++||+|||+|||+||+|++.++..|+...+.|.
T Consensus 107 ~at~d~~~~~~g~~~~~~~~~G~~av~VPG~v~g~~~a~~~~G~Lpw~~ll~PAI~lA~~Gf~Vs~~la~~~~~~~~~l~ 186 (377)
T 2qmc_A 107 KATKNMFLDKQGNVVPKLSEDGYLAAGVPGTVAGMEAMLKKYGTKKLSQLIDPAIKLAENGYAISQRQAETLKEARERFL 186 (377)
T ss_dssp TCCTTTTBCTTSCBCTTTTTSSGGGCCBCCHHHHHHHHHHHHCCSCHHHHTHHHHHHHHHCEECCHHHHHHHHHHHHHHT
T ss_pred cCCHHHHhhccCCcCCccccCCCcccccchHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCcCCHHHHHHHHHHHHHHh
Confidence 9999999753 34457899999999999999999999999999999999999999999999999999998888899
Q ss_pred cCccccccccc-CCcccCCCCeecCHHHHHHHHHHHHhCCCCcccchHHHHHHHHHHhcCCCCCHhhhccCcceEecCeE
Q 006929 220 NDRGLRQVFAP-NGKLLKSGDKCYNVELAQSLEALAEQGPEALYNGTVGEKLVKDVREAGGILTIEDLRSYKVDVMDAMS 298 (625)
Q Consensus 220 ~~p~~~~~f~~-~G~~~~~Gd~l~~p~LA~TL~~IA~~G~~~FY~G~iA~~iv~~~~~~GG~lt~~DL~~Y~~~~~~Pl~ 298 (625)
.+|+++++|++ +|+++++||+|+||+||+|||+||++|+++||+|+||++|+++++++||+||++||++|+++|++||+
T Consensus 187 ~~p~~~~~f~~~~G~~~~~G~~~~~p~LA~TL~~IA~~G~~~FY~G~iA~~iv~~~~~~GG~lt~~DLa~y~~~~~~Pl~ 266 (377)
T 2qmc_A 187 KYSSSKKYFFKKGHLDYQEGDLFVQKDLAKTLNQIKTLGAKGFYQGQVAELIEKDMKKNGGIITKEDLASYNVKWRKPVV 266 (377)
T ss_dssp TCHHHHHHHEETTTEECCTTCEECCHHHHHHHHHHHHHTTHHHHSHHHHHHHHHHHHHTTCCCCHHHHHTCCCEEECCEE
T ss_pred cChhHHhhccCCCCccCCCCCEeeCHHHHHHHHHHHHhCcHhhhCCHHHHHHHHHHHHcCCCCCHHHHhhCCcceeCCeE
Confidence 99999999997 99999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeCCeEEEecCCCCChHHHHHHHHHHHhcCCCCC-CCCChhHHHHHHHHHHHHHHHHH-hcCCCCCCCCchHHHhhCCH
Q 006929 299 ANAMGYTISGMPPPSSGTVGMSMILNIFDSYGSSD-SAKGNLGLHRLIEALKHMFAVRM-TLGDPKFVNNTNTLSEMLSP 376 (625)
Q Consensus 299 ~~~~g~~v~~~ppPssG~~~l~~~LniLe~~~~~~-~~~~~~~~H~lvEa~k~a~a~R~-~lgDP~f~~v~~~~~~lls~ 376 (625)
++|+||+||++||||||+++++++|||||+|++.. ..++++++|+++||+|+||+||. ++|||+|++++ +++|||+
T Consensus 267 ~~yrg~~v~~~pPPssGG~~~l~~L~iLe~~~l~~~~~~s~~~~H~~~EA~k~AfadR~~~lgDP~f~~vp--~~~LLs~ 344 (377)
T 2qmc_A 267 GSYRGYKIISMSPPSSGGTHLIQILNVMENADLSALGYGASKNIHIAAEAMRQAYADRSVYMGDADFVSVP--VDKLINK 344 (377)
T ss_dssp EEETTEEEEECCTTBSHHHHHHHHHHHHTTSCHHHHCTTCHHHHHHHHHHHHHHHHHHHHHCSCTTTSCCC--HHHHTCH
T ss_pred EEeCCeEEEeCCCCCchHHHHHHHHHHHhcCCccccCCchHHHHHHHHHHHHHHHHHHHHhcCCccccccc--HHHhCCH
Confidence 99999999999999999888889999999998854 34578899999999999999998 69999999987 7999999
Q ss_pred HHHHHHHhhcCCCCCCCCCccccc
Q 006929 377 SYAEQIQLKIFDNTTFPPDYYMYR 400 (625)
Q Consensus 377 ~~a~~~~~~I~~~~~~~~~~~~~~ 400 (625)
+|+++++++|+++++.++.+|.+.
T Consensus 345 ~ya~~~~~~I~~~~a~~~~~~~~~ 368 (377)
T 2qmc_A 345 AYAKKIFDTIQPDTVTPSSQIKPG 368 (377)
T ss_dssp HHHHHHHHTCBTTBCCCGGGCCGG
T ss_pred HHHHHHHHhCCcccCCChhhcCCC
Confidence 999999999999988877666554
No 6
>2dg5_A Gamma-glutamyltranspeptidase; gamma-glutamyltransferase, GGT, gamma-GT, glutathione; HET: GLU; 1.60A {Escherichia coli K12} SCOP: d.153.1.6 PDB: 2dbu_A 2dbw_A* 2dbx_A* 2e0x_A 2e0y_A 2z8i_A* 2z8j_A* 2z8k_A*
Probab=100.00 E-value=3.2e-94 Score=768.42 Aligned_cols=334 Identities=35% Similarity=0.575 Sum_probs=311.8
Q ss_pred cCCCcccccCeEEEcCChhHHHHHHHHHhcCCCHHHHHHHHHHHHHhhccCCCCCCCCceEEEEecCCCCEEEEEeecCc
Q 006929 63 NYGDVVESEHGVVAADDGHCSEIGASTLRLGGHAVDAAVATALCLGVVNPMASGIGGGAFMVLRSSATSQTLAFDMRETA 142 (625)
Q Consensus 63 ~~~~~~~~~~gaVas~~~~as~aG~~iL~~GGNAvDAAIAaa~~l~Vv~P~~sGiGGggf~lv~~~~~g~~~~id~re~A 142 (625)
..|+.+.+++|||+|+||+||++|++||++||||||||||+++||+|||||+||||||+|||||++ ++++++|||||+|
T Consensus 15 ~~r~~~~~~~g~Vas~~~lAs~aG~~iL~~GGNAvDAAVA~a~~l~VveP~~~GiGGggF~li~~~-~~~~~~id~re~A 93 (366)
T 2dg5_A 15 DVFHPVRAKQGMVASVDATATQVGVDILKEGGNAVDAAVAVGYALAVTHPQAGNLGGGGFMLIRSK-NGNTTAIDFREMA 93 (366)
T ss_dssp CSSCCEEESSCEEEESCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHCTTTCCSSSEEEEEEECT-TSCEEEEEECCBC
T ss_pred CCCCccccCceEEECCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhccccCCCCCCeEEEEEcC-CCCEEEEeeeecC
Confidence 346677789999999999999999999999999999999999999999999999999999999975 7899999999999
Q ss_pred cCCCChhhhccC-----ccccccCCCccccccHHHHHHHHHHhcCCCCHHHhHHHHHHHHhcCCccCHHHHHHHHHHHHH
Q 006929 143 PQAASQDMYEND-----TEAKYTGALSIGVPGEIAGLHEAWLKHGRLAWRALFQPAIKLAKEGFVVAPYLGQHIANKAEV 217 (625)
Q Consensus 143 P~~a~~~~~~~~-----~~~~~~G~~sv~VPG~v~Gl~~a~~r~G~Lpw~~Ll~PAI~lA~~Gf~Vs~~la~~l~~~~~~ 217 (625)
|++++.+||.+. +..+..|+++|+|||+|+||+++|+|||||||++||+|||+|||+||+|++.++..|+...+.
T Consensus 94 P~~a~~~~~~~~~g~~~~~~~~~G~~av~VPG~v~g~~~a~~~~G~Lpw~~ll~PAI~lA~~Gf~Vs~~la~~~~~~~~~ 173 (366)
T 2dg5_A 94 PAKATRDMFLDDQGNPDSKKSLTSHLASGTPGTVAGFSLALDKYGTMPLNKVVQPAFKLARDGFIVNDALADDLKTYGSE 173 (366)
T ss_dssp CTTCCTTTTBCTTSCBCHHHHHTSGGGCCBCCHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHCEECCHHHHHHHHHTGGG
T ss_pred cccCCHHHHhhccCCcCCCccCCCCcccccchHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCcCCHHHHHHHHHHHHH
Confidence 999999999754 234568999999999999999999999999999999999999999999999999999987777
Q ss_pred HhcCcccccccc-cCCcccCCCCeecCHHHHHHHHHHHHhCCCCcccchHHHHHHHHHHhcCCCCCHhhhccCcceEecC
Q 006929 218 ILNDRGLRQVFA-PNGKLLKSGDKCYNVELAQSLEALAEQGPEALYNGTVGEKLVKDVREAGGILTIEDLRSYKVDVMDA 296 (625)
Q Consensus 218 l~~~p~~~~~f~-~~G~~~~~Gd~l~~p~LA~TL~~IA~~G~~~FY~G~iA~~iv~~~~~~GG~lt~~DL~~Y~~~~~~P 296 (625)
+..+|+++++|+ |+|+++++||+|+||+||+|||+||++|+++||+|+||++|+++++++||+||++||++|+++|++|
T Consensus 174 l~~~~~~~~~f~~~~G~~~~~G~~~~~p~LA~TL~~IA~~G~~~FY~G~iA~~iv~~~~~~GG~lt~~DLa~y~~~~~~P 253 (366)
T 2dg5_A 174 VLPNHENSKAIFWKEGEPLKKGDTLVQANLAKSLEMIAENGPDEFYKGTIAEQIAQEMQKNGGLITKEDLAAYKAVERTP 253 (366)
T ss_dssp TGGGSHHHHHHHEETTEECCTTCEECCHHHHHHHHHHHHHCTHHHHTSHHHHHHHHHHHHTTCCCCHHHHHHCCCEEECC
T ss_pred HhcCchHHHHhcCCCCeECCCCCEeeCHHHHHHHHHHHHhCchhccCCHHHHHHHHHHHHcCCCCCHHHHhhCCCceeCC
Confidence 888888888885 8999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEeeeCCeEEEecCCCCChHHHHHHHHHHHhcCCCCC-CCCChhHHHHHHHHHHHHHHHHH-hcCCCCCCCCchHHHhhC
Q 006929 297 MSANAMGYTISGMPPPSSGTVGMSMILNIFDSYGSSD-SAKGNLGLHRLIEALKHMFAVRM-TLGDPKFVNNTNTLSEML 374 (625)
Q Consensus 297 l~~~~~g~~v~~~ppPssG~~~l~~~LniLe~~~~~~-~~~~~~~~H~lvEa~k~a~a~R~-~lgDP~f~~v~~~~~~ll 374 (625)
|+++|+||+||++|||||||++++++|||||+|++.. ..++++++|+++||+|+||+||. ++|||+|++++ +++||
T Consensus 254 l~~~yrg~~v~~~pPpssgG~~~l~~L~iLe~~~~~~~~~~s~~~~H~~~EA~k~A~adR~~~lgDp~f~~vp--~~~Ll 331 (366)
T 2dg5_A 254 ISGDYRGYQVYSMPPPSSGGIHIVQILNILENFDMKKYGFGSADAMQIMAEAEKYAYADRSEYLGDPDFVKVP--WQALT 331 (366)
T ss_dssp EEEEETTEEEEECCTTBSHHHHHHHHHHHHTTSCHHHHCTTCHHHHHHHHHHHHHHHHHHHHHCSCTTTSCCC--HHHHT
T ss_pred eEEEeCCeEEEECCCCchHHHHHHHHHHhccccCccccCCchHHHHHHHHHHHHHHHHHHHHhcCCcccccch--HHHhC
Confidence 9999999999999999988887889999999998854 34578899999999999999998 69999999987 78999
Q ss_pred CHHHHHHHHhhcCCCCCCCCCcccc
Q 006929 375 SPSYAEQIQLKIFDNTTFPPDYYMY 399 (625)
Q Consensus 375 s~~~a~~~~~~I~~~~~~~~~~~~~ 399 (625)
|++|+++++++|+++++.++.+|.+
T Consensus 332 s~~ya~~~~~~I~~~~~~~~~~~~~ 356 (366)
T 2dg5_A 332 NKAYAKSIADQIDINKAKPSSEIRP 356 (366)
T ss_dssp CHHHHHHHHTTCBTTBCCCGGGCCC
T ss_pred CHHHHHHHHHhcCcccCCChhhcCC
Confidence 9999999999999988877666654
No 7
>3g9k_L Capsule biosynthesis protein CAPD; CAPD protein, the great lakes regional C excellence, GLRCE, capsule biogenesis/degradation; HET: GLU; 1.79A {Bacillus anthracis} PDB: 3ga9_L*
Probab=100.00 E-value=1.8e-89 Score=717.99 Aligned_cols=300 Identities=31% Similarity=0.479 Sum_probs=266.9
Q ss_pred CCcccccCeEEEcCChhHHHHHHHHHhcCCCHHHHHHHHHHHHHhhccCCCCCCCCceEEEEecCCCCEEEEEeecCccC
Q 006929 65 GDVVESEHGVVAADDGHCSEIGASTLRLGGHAVDAAVATALCLGVVNPMASGIGGGAFMVLRSSATSQTLAFDMRETAPQ 144 (625)
Q Consensus 65 ~~~~~~~~gaVas~~~~as~aG~~iL~~GGNAvDAAIAaa~~l~Vv~P~~sGiGGggf~lv~~~~~g~~~~id~re~AP~ 144 (625)
.+....++|||+|+||+||++|++||++||||||||||+++||+||+||+||||||+|||||++. +++ +|||||+||+
T Consensus 13 ~~~~~~~~g~Vas~~~lAs~aG~~iL~~GGNAvDAAVA~a~~l~VveP~~sGiGGggf~li~~~~-~~~-~id~r~~AP~ 90 (323)
T 3g9k_L 13 DSMGDKGTYGVSASHPLAVEEGMKVLKNGGSAVDAAIVVSYVLGVVELHASGIGGGGGMLIISKD-KET-FIDYRETTPY 90 (323)
T ss_dssp -----CCCCEEEESSHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTTTTCCTTSEEEEEEECSS-CEE-EEECCCBCCC
T ss_pred cCCCCCCCeEEECCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCCCCCeEEEEEeCC-CCE-EEEeeccCcH
Confidence 34556789999999999999999999999999999999999999999999999999999999765 788 9999999999
Q ss_pred CCChhhhccCccccccCCCccccccHHHHHHHHHHhcCCCCHHHhHHHHHHHHhcCCccCHHHHHHHHHHHHHHhcCccc
Q 006929 145 AASQDMYENDTEAKYTGALSIGVPGEIAGLHEAWLKHGRLAWRALFQPAIKLAKEGFVVAPYLGQHIANKAEVILNDRGL 224 (625)
Q Consensus 145 ~a~~~~~~~~~~~~~~G~~sv~VPG~v~Gl~~a~~r~G~Lpw~~Ll~PAI~lA~~Gf~Vs~~la~~l~~~~~~l~~~p~~ 224 (625)
++ ..|.++|+|||+|+||+++|+|||+|||++||+|||+|||+||+|++.++..|+...+.+..+|++
T Consensus 91 ~a------------~~G~~av~VPG~v~g~~~a~~~~G~Lpw~~ll~PAI~lA~~Gf~Vs~~la~~~~~~~~~l~~~~~~ 158 (323)
T 3g9k_L 91 FT------------GNQKPHIGVPGFVAGMEYIHDNYGSLPMGELLQPAINYAEKGFKVDDSLTMRLDLAKPRIYSDKLS 158 (323)
T ss_dssp ------------------CCCCBCCHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHCEECCHHHHHHHHHHHHHHCCTTCG
T ss_pred hH------------hcCCCcccCchHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCccCHHHHHHHHHHHHHHhcCCcc
Confidence 77 247799999999999999999999999999999999999999999999999999988889889998
Q ss_pred ccccccCCcccCCCCeecCHHHHHHHHHHHHhCCCCcccchHHHHHHHHHHhcCCCCCHhhhccCcceEecCeEeeeCCe
Q 006929 225 RQVFAPNGKLLKSGDKCYNVELAQSLEALAEQGPEALYNGTVGEKLVKDVREAGGILTIEDLRSYKVDVMDAMSANAMGY 304 (625)
Q Consensus 225 ~~~f~~~G~~~~~Gd~l~~p~LA~TL~~IA~~G~~~FY~G~iA~~iv~~~~~~GG~lt~~DL~~Y~~~~~~Pl~~~~~g~ 304 (625)
+ |+++|+++++||+|+||+||+|||+||++|+++||+|+||++|+++ |+||.+||++|+++|++||+++|+||
T Consensus 159 ~--f~~~G~~~~~G~~~~~p~LA~TL~~IA~~G~~~FY~G~iA~~iv~~-----G~lt~~DLa~y~~~~~~Pl~~~yrg~ 231 (323)
T 3g9k_L 159 I--FYPNGEPIETGETLIQTDLARTLKKIQKEGAKGFYEGGVARAISKT-----AKISLEDIKGYKVEVRKPVKGNYMGY 231 (323)
T ss_dssp G--GSGGGSCCCTTCEECCHHHHHHHHHHHHHTTHHHHSHHHHHHHHHH-----HTCCHHHHHTCCCEEECCEEEEETTE
T ss_pred c--ccCCCCCCCCCCEEECHHHHHHHHHHHHhCcccccCCHHHHHHHHc-----CCCCHHHHhhCCceEeCCEEEEeCCe
Confidence 8 8899999999999999999999999999999999999999999998 99999999999999999999999999
Q ss_pred EEEecCCCCChHHHHHHHHHHHhcCCCCCC-CCChhHHHHHHHHHHHHHHHHH-hcCCCCCCCCchHHHhhCCHHHHHHH
Q 006929 305 TISGMPPPSSGTVGMSMILNIFDSYGSSDS-AKGNLGLHRLIEALKHMFAVRM-TLGDPKFVNNTNTLSEMLSPSYAEQI 382 (625)
Q Consensus 305 ~v~~~ppPssG~~~l~~~LniLe~~~~~~~-~~~~~~~H~lvEa~k~a~a~R~-~lgDP~f~~v~~~~~~lls~~~a~~~ 382 (625)
+||++||||||.+ ++++|||||+|++... .++++++|+++||+|+||++|. ++|||+|++++ +++|||++|++++
T Consensus 232 ~v~~~pPpssG~~-~l~~L~ile~~~~~~~~~~~~~~~H~~~EA~k~A~adR~~~lgDP~f~~vp--~~~Lls~~ya~~~ 308 (323)
T 3g9k_L 232 DVYTAPPPFSGVT-LLQMLKLAEKKEVYKDVDHTATYMSKMEEISRIAYQDRKKNLGDPNYVNMD--PNKMVSDKYISTM 308 (323)
T ss_dssp EEEECCTTSCHHH-HHHHHHHHHHTTGGGGTTSHHHHHHHHHHHHHHHHHHHHHTTCC------C--HHHHTSHHHHHTC
T ss_pred EEEeCCCCCHHHH-HHHHHHHHhcCCCccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCcccccCC--HHHhCCHHHHHHH
Confidence 9999999999766 5599999999998653 4568999999999999999998 69999999987 7999999999999
Q ss_pred HhhcCC
Q 006929 383 QLKIFD 388 (625)
Q Consensus 383 ~~~I~~ 388 (625)
+++|++
T Consensus 309 ~~~I~d 314 (323)
T 3g9k_L 309 KNENGD 314 (323)
T ss_dssp C-----
T ss_pred HHhcCc
Confidence 999986
No 8
>2dg5_B Gamma-glutamyltranspeptidase; gamma-glutamyltransferase, GGT, gamma-GT, glutathione; HET: GLU; 1.60A {Escherichia coli K12} SCOP: d.153.1.6 PDB: 2dbu_B 2dbw_B* 2dbx_B* 2e0x_B 2e0y_B 2z8i_B* 2z8j_B* 2z8k_B*
Probab=100.00 E-value=2.8e-60 Score=464.96 Aligned_cols=188 Identities=38% Similarity=0.566 Sum_probs=180.0
Q ss_pred ceEEEEEcCCCCEEEEEecCCCCCCceeeeCCcceeeecCCCCCCC-CCCCCCCCCCCCCCCccCCCCCCCCCCcceeee
Q 006929 409 TSHFCIVDAERNAVSMTTTVNYAFGAGILSPSTGIVLNNEMDDFSI-PTEISPDKLPPAPANFIEPNKRPLSSMTPLIIT 487 (625)
Q Consensus 409 Tth~sVvD~~GnaVS~T~Si~~~FGSgv~~p~tGi~lNN~m~dFs~-~~~~n~~~~~p~~~N~i~PGKRP~ssm~PtIv~ 487 (625)
||||||+|++||+||+|+|+|.+|||++++|+|||+|||||+||++ |+..|.|+++|+++|+|+|||||+|||+|+||+
T Consensus 1 Tth~svvD~~GnaVS~T~Si~~~FGSgv~~p~tGi~LNN~m~dFs~~pg~~n~~g~~~~~~N~i~PgKRP~ssm~Ptiv~ 80 (190)
T 2dg5_B 1 TTHYSVVDKDGNAVAVTYTLNTTFGTGIVAGESGILLNNQMDDFSAKPGVPNVYGLVGGDANAVGPNKRPLSSMSPTIVV 80 (190)
T ss_dssp CEEEEEECTTSCEEEEEEECSSTTTTCEECGGGCCEECCGGGGSBSSTTCCCTTSCCCCSTTBCCTTCCCCBCCCCEEEE
T ss_pred CeEEEEECCCCCEEEEEecCCCCcCCeeEcCCccEEEeCCCCcccCCCCCcCCcCCCCCCccccCCCCcccccCCCEEEe
Confidence 8999999999999999999999999999999999999999999998 788899999999999999999999999999999
Q ss_pred ecCceeEEecCCCccchHHHHHHHHHHHHhcCCCHHHHhhCCccccccCCCeEEEccccccCCCcCCCCHHHHHHHHHCC
Q 006929 488 KDNQLAGVIGGSGGMNIIPAVTQVFINHFILGMEPLAAVQNPRVYHKLIPNVVSYENWTVIDGDHIEISEESKLFLEKRG 567 (625)
Q Consensus 488 k~g~~~lv~Ga~GG~~i~~av~Qvl~~~l~~gm~l~~AI~aPR~~~~~~p~~v~~E~~~~~~~~~~~~~~~~~~~L~~~G 567 (625)
++|+++|++|+|||++|+|+++|+|+|+++|||++||||++||||+|+.|+.+.+|. +++++++++|+++|
T Consensus 81 ~~g~~~l~~Gs~GG~~i~~~~~q~l~n~ld~gm~~q~Ai~aPR~~~~~~~~~~~~E~---------~~~~~~~~~L~~~G 151 (190)
T 2dg5_B 81 KDGKTWLVTGSPGGSRIITTVLQMVVNSIDYGLNVAEATNAPRFHHQWLPDELRVEK---------GFSPDTLKLLEAKG 151 (190)
T ss_dssp ETTEEEEEECCCCGGGHHHHHHHHHHHHHTSCCCHHHHHHSCCEECCSSSCCEEECT---------TSCHHHHHHHHHTT
T ss_pred cCCcEEEEEECCCcchHHHHHHHHHHHHHccCCCHHHHhhCCEEeeccCCCeEEecC---------CCCHHHHHHHHhCC
Confidence 999999999999999999999999999999999999999999999999999999999 89999999999999
Q ss_pred CeeEEecCcceEEEEEecccCCccccccccCccCccccCCCeEEEeccCCC-CCccccC
Q 006929 568 HQLKAKAGGAIVQFVVQTLQNPINRIRKIGKGIDNAQALHGILTAVSDPRK-DGRPAAV 625 (625)
Q Consensus 568 h~v~~~~~~~~~q~i~~~~~~~~~~~~~~~~~~~~~~~~~G~l~a~sDpR~-~G~a~g~ 625 (625)
|+++.....+.+|+|.++ .+|.++|+||||| +|.|+||
T Consensus 152 h~v~~~~~~g~~~~i~~~--------------------~~g~~~g~sDpR~~~G~a~g~ 190 (190)
T 2dg5_B 152 QKVALKEAMGSTQSIMVG--------------------PDGELYGASDPRSVDDLTAGY 190 (190)
T ss_dssp CCEEECSCCCCCEEEEEC--------------------TTSCEEEEECTTSTTCEEEEC
T ss_pred cEeEEecCCCeEEEEEEe--------------------CCCeEEEEECCCCCCCeeeeC
Confidence 999877667778888765 2688999999999 9999987
No 9
>2qmc_B GGT, gamma-glutamyltranspeptidase; NTN-hydrolase, transferase; HET: GTB; 1.55A {Helicobacter pylori} PDB: 2qm6_B* 2nqo_B* 3fnm_B*
Probab=100.00 E-value=3.8e-58 Score=448.89 Aligned_cols=184 Identities=36% Similarity=0.491 Sum_probs=173.7
Q ss_pred ceEEEEEcCCCCEEEEEecCCCCCCceeeeCCcceeeecCCCCCCC-CCCCCCCCCCCCCCCccCCCCCCCCCCcceeee
Q 006929 409 TSHFCIVDAERNAVSMTTTVNYAFGAGILSPSTGIVLNNEMDDFSI-PTEISPDKLPPAPANFIEPNKRPLSSMTPLIIT 487 (625)
Q Consensus 409 Tth~sVvD~~GnaVS~T~Si~~~FGSgv~~p~tGi~lNN~m~dFs~-~~~~n~~~~~p~~~N~i~PGKRP~ssm~PtIv~ 487 (625)
||||||+|++||+||+|+|||.+||||+++|+|||+|||||+||++ |+.+|.||++|+++|+|+|||||+|||+|+||+
T Consensus 1 Tth~svvD~~GnaVS~T~Si~~~FGSgv~~p~tGi~LNN~m~dFs~~pg~~n~~g~~~~~~N~i~PgKRP~ssm~Ptiv~ 80 (188)
T 2qmc_B 1 ATHYSVADRWGNAVSVTYTINASYGSAASIDGAGFLLNNEMDDFSIKPGNPNLYGLVGGDANAIEANKRPLSSMSPTIVL 80 (188)
T ss_dssp CEEEEEEETTSCEEEEEEECSSTTTTSCBCTTTCCBCCCGGGGSBSSTTCCCTTSCCCCSTTBCCTTCCCCBCCCCEEEE
T ss_pred CeEEEEECCCCCEEEEEecCCCCccCeeEcCCCceEEcCCCCCcccCCCCccccCCCCCcccccCCCCccccCCCCEEEE
Confidence 8999999999999999999999999999999999999999999996 888899999999999999999999999999999
Q ss_pred ecCceeEEecCCCccchHHHHHHHHHHHHhcCCCHHHHhhCCccccccCCCeEEEccccccCCCcCCCCHHHHHHHHHCC
Q 006929 488 KDNQLAGVIGGSGGMNIIPAVTQVFINHFILGMEPLAAVQNPRVYHKLIPNVVSYENWTVIDGDHIEISEESKLFLEKRG 567 (625)
Q Consensus 488 k~g~~~lv~Ga~GG~~i~~av~Qvl~~~l~~gm~l~~AI~aPR~~~~~~p~~v~~E~~~~~~~~~~~~~~~~~~~L~~~G 567 (625)
|+|+++|++|+|||++|||+++|+|+|+++|||++||||++||||+|+.|+.+.+|.. +++++++++|+++|
T Consensus 81 ~~g~~~l~~Gs~GG~~i~~~~~q~l~n~ld~gm~~q~Ai~aPR~h~~~~p~~~~~E~~--------~~~~~~~~~L~~~G 152 (188)
T 2qmc_B 81 KNNKVFLVVGSPGGSRIITTVLQVISNVIDYNMNISEAVSAPRFHMQWLPDELRIEKF--------GMPADVKDNLTKMG 152 (188)
T ss_dssp ETTEEEEEECCCCGGGHHHHHHHHHHHHHHHCCCHHHHHHSCCCBCCSSSCCEEECTT--------SSCHHHHHHHHHHT
T ss_pred eCCcEEEEEECCCcchHHHHHHHHHHHHHccCCCHHHHhhCCEEeeccCCCeEEEecC--------CCCHHHHHHHHHCC
Confidence 9999999999999999999999999999999999999999999999999999999972 58999999999999
Q ss_pred CeeEEecCcceEEEEEe--cccCCccccccccCccCccccCCCeEEEeccCCCC
Q 006929 568 HQLKAKAGGAIVQFVVQ--TLQNPINRIRKIGKGIDNAQALHGILTAVSDPRKD 619 (625)
Q Consensus 568 h~v~~~~~~~~~q~i~~--~~~~~~~~~~~~~~~~~~~~~~~G~l~a~sDpR~~ 619 (625)
|+++.....+.+|+|.+ +. .+|.++|+|||||+
T Consensus 153 h~v~~~~~~g~~q~I~~~~~~-------------------~~g~~~g~sDpR~~ 187 (188)
T 2qmc_B 153 YQIVTKPVMGDVNAIQVLPKT-------------------KGSVFYGSTDPRKE 187 (188)
T ss_dssp CCEEECSCCCCCCEEEEEECS-------------------SSEEEEEECCTTC-
T ss_pred CeeEEccCCeeEEEEEEeeeC-------------------CCCEEEEEeCCCCC
Confidence 99988776788999987 31 26889999999997
No 10
>2v36_B Gamma-glutamyltranspeptidase small chain; transferase, glutathione biosynthesis, gamma-glutamyl transferase, acyltransferase, zymogen; 1.85A {Bacillus subtilis} PDB: 3a75_B*
Probab=100.00 E-value=1.7e-57 Score=445.36 Aligned_cols=179 Identities=37% Similarity=0.593 Sum_probs=157.1
Q ss_pred ceEEEEEcCCCCEEEEEecCCCCCCceeeeCCcceeeecCCCCCCCCCCCCCCCCCCCCCCccCCCCCCCCCCcceeeee
Q 006929 409 TSHFCIVDAERNAVSMTTTVNYAFGAGILSPSTGIVLNNEMDDFSIPTEISPDKLPPAPANFIEPNKRPLSSMTPLIITK 488 (625)
Q Consensus 409 Tth~sVvD~~GnaVS~T~Si~~~FGSgv~~p~tGi~lNN~m~dFs~~~~~n~~~~~p~~~N~i~PGKRP~ssm~PtIv~k 488 (625)
||||||+|++||+||+|+|+|.+||||+++|+|||+|||+|+||++. |+++|+|+|||||+|||+|+||++
T Consensus 1 Tth~sVvD~~GnaVS~T~Si~~~FGSgv~~p~tG~~LNN~m~dFs~~---------pg~~N~i~PGKRP~ssm~Ptiv~~ 71 (193)
T 2v36_B 1 TTHFTVADRWGNVVSYTTTIEQLFGTGIMVPDYGVILNNELTDFDAI---------PGGANEVQPNKRPLSSMTPTILFK 71 (193)
T ss_dssp CEEEEEEETTSCEEEEEEECSSTTTTSCBCTTTCCBCCCGGGGSBSS---------SSSTTBCCTTCCCCBCCCCEEEEE
T ss_pred CeEEEEECCCCCEEEEEecCCCCcCCeeEcCCCceeECCCCCCccCC---------CCCCCccCCCCcccccCCCEEEEe
Confidence 89999999999999999999999999999999999999999999952 447899999999999999999999
Q ss_pred cCceeEEecCCCccchHHHHHHHHHHHHhcCCCHHHHhhCCccccccCCCeEEEccccccCCCcCCCCHHHHHHHHHCCC
Q 006929 489 DNQLAGVIGGSGGMNIIPAVTQVFINHFILGMEPLAAVQNPRVYHKLIPNVVSYENWTVIDGDHIEISEESKLFLEKRGH 568 (625)
Q Consensus 489 ~g~~~lv~Ga~GG~~i~~av~Qvl~~~l~~gm~l~~AI~aPR~~~~~~p~~v~~E~~~~~~~~~~~~~~~~~~~L~~~Gh 568 (625)
+|+++|++|+|||++|||+++|+|+|+++|||++||||++||||+|+ |+.+.+|+ +++++++++|+++||
T Consensus 72 ~g~~~l~~Gs~GG~~i~~~~~q~l~n~ld~gm~~q~Ai~aPR~~~~~-p~~v~~E~---------~~~~~~~~~L~~~Gh 141 (193)
T 2v36_B 72 DDKPVLTVGSPGGATIISSVLQTILYHIEYGMELKAAVEEPRIYTNS-MSSYRYED---------GVPKDVLSKLNGMGH 141 (193)
T ss_dssp TTEEEEEEECCCGGGHHHHHHHHHHHHHTSCCCHHHHHHSCCEEEEE-TTEEEECT---------TSCC----------C
T ss_pred CCCEEEEEECCCcchhHHHHHHHHHHHHccCCCHHHHhhCCEeeecC-CCeeEecC---------CCCHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999999999998 99999999 899999999999999
Q ss_pred eeE-EecCcceEEEEEecccCCccccccccCccCccccCCCeEEEeccCCCCCccccC
Q 006929 569 QLK-AKAGGAIVQFVVQTLQNPINRIRKIGKGIDNAQALHGILTAVSDPRKDGRPAAV 625 (625)
Q Consensus 569 ~v~-~~~~~~~~q~i~~~~~~~~~~~~~~~~~~~~~~~~~G~l~a~sDpR~~G~a~g~ 625 (625)
+++ ....++.+|+|.++. .+|.++|+|||||+|.+++|
T Consensus 142 ~v~~~~~~~g~~qaI~~~~-------------------~~g~~~g~sDpR~~G~a~~~ 180 (193)
T 2v36_B 142 KFGTSPVDIGNVQSISIDH-------------------ENGTFKGVADSSRNGAAIGI 180 (193)
T ss_dssp CCCSSCCCCCCCEEEEEET-------------------TTTEEEEECCTTTTCBC-CC
T ss_pred eeeeecCCCcEEEEEEEEC-------------------CCCEEEEEeCCCCCCeEEEE
Confidence 997 555578899998741 26889999999999999875
No 11
>3g9k_S Capsule biosynthesis protein CAPD; CAPD protein, the great lakes regional C excellence, GLRCE, capsule biogenesis/degradation; HET: GLU; 1.79A {Bacillus anthracis} PDB: 3ga9_S*
Probab=100.00 E-value=1.1e-54 Score=420.65 Aligned_cols=171 Identities=28% Similarity=0.367 Sum_probs=152.1
Q ss_pred ceEEEEEcCCCCEEEEEecCCCCCCceeeeCCcceeeecCCCCCCCCCCCCCCCCCCCCCCccCCCCCCCCCCcceeeee
Q 006929 409 TSHFCIVDAERNAVSMTTTVNYAFGAGILSPSTGIVLNNEMDDFSIPTEISPDKLPPAPANFIEPNKRPLSSMTPLIITK 488 (625)
Q Consensus 409 Tth~sVvD~~GnaVS~T~Si~~~FGSgv~~p~tGi~lNN~m~dFs~~~~~n~~~~~p~~~N~i~PGKRP~ssm~PtIv~k 488 (625)
||||||+|+|||+||+|+|+|.+||||+++ |||+|||+|+||+ | +++|+++|||||+|||+|+||++
T Consensus 1 Tth~svvD~~GnaVS~T~Si~~~FGSgv~~--tGi~LNN~m~dFs-p----------~~~N~i~PgKRP~ssm~Ptiv~~ 67 (177)
T 3g9k_S 1 TTHFVIIDRDGTVVSSTNTLSNFFGTGKYT--AGFFLNNQLQNFG-S----------EGFNSYEPGKRSRTFMAPTVLKK 67 (177)
T ss_dssp CEEEEEECTTCCEEEEEEECSSTTTTSCEE--TTEECCCCCCC---------------------CCCCCCCCCCCEEEEE
T ss_pred CeEEEEECCCCCEEEEEccCCCCCCcceEe--cceEEcCcccccC-C----------CCCcccCCCCccccCCCCEEEEc
Confidence 899999999999999999999999999999 9999999999998 3 46899999999999999999999
Q ss_pred cCceeEEecCCCccchHHHHHHHHHHHHhcCCCHHHHhhCCccccccCCCeEEEccccccCCCcCCCCHHHHHHHHHCCC
Q 006929 489 DNQLAGVIGGSGGMNIIPAVTQVFINHFILGMEPLAAVQNPRVYHKLIPNVVSYENWTVIDGDHIEISEESKLFLEKRGH 568 (625)
Q Consensus 489 ~g~~~lv~Ga~GG~~i~~av~Qvl~~~l~~gm~l~~AI~aPR~~~~~~p~~v~~E~~~~~~~~~~~~~~~~~~~L~~~Gh 568 (625)
+|+ +|++|+|||++|||+++|+|+|+++|||++||||++||||+ .|+.+.+|+ +++++++++|++|||
T Consensus 68 ~g~-~l~~Gs~GG~~i~~~~~q~l~n~ld~gm~~q~Ai~aPR~~~--~~~~~~~E~---------~~~~~~~~~L~~~Gh 135 (177)
T 3g9k_S 68 DGE-TIGIGSPGGNRIPQILTPILDKYTHGKGSLQDIINEYRFTF--EKNTAYTEI---------QLSSEVKNELSRKGL 135 (177)
T ss_dssp TTE-EEEEECCCGGGHHHHHHHHHHHHHTTCSCHHHHHHSCCEEE--ETTEEEESS---------CCCHHHHHHHHTTTC
T ss_pred CCc-EEEEECCCHHHHHHHHHHHHHHHHhCCCCHHHHHhCCeeec--CCCeEEEcC---------CCCHHHHHHHHHcCC
Confidence 998 99999999999999999999999999999999999999998 599999999 899999999999999
Q ss_pred eeEEecC---cceEEEEEecccCCccccccccCccCccccCCCeEEEeccCCCCCccc
Q 006929 569 QLKAKAG---GAIVQFVVQTLQNPINRIRKIGKGIDNAQALHGILTAVSDPRKDGRPA 623 (625)
Q Consensus 569 ~v~~~~~---~~~~q~i~~~~~~~~~~~~~~~~~~~~~~~~~G~l~a~sDpR~~G~a~ 623 (625)
+++.... .+.+|+|.+++ ++|.|+|+|||||+|.|.
T Consensus 136 ~v~~~~~~~~~g~~~ai~~~~-------------------~~g~l~g~sDpR~~G~a~ 174 (177)
T 3g9k_S 136 NVKKKVSPAFFGGVQALIKDE-------------------RDNVITGAGDGRRNGTWK 174 (177)
T ss_dssp EEEECCCGGGGCCCEEEEEET-------------------TTTEEEEECCGGGTCEEE
T ss_pred eeEECCCCCcceeEEEEEEEC-------------------CCCEEEEEeCCCCCCeee
Confidence 9987652 57899998751 378999999999999875
No 12
>1apy_A Aspartylglucosaminidase; glycosylasparaginase, hydrolase; HET: NAG BMA; 2.00A {Homo sapiens} SCOP: d.153.1.5 PDB: 1apz_A*
Probab=90.36 E-value=0.43 Score=44.98 Aligned_cols=43 Identities=23% Similarity=0.241 Sum_probs=32.0
Q ss_pred CChhHHHHHHHHHhcCCCHHHHHHHHHHHHHhhc-cCCCCCCCC
Q 006929 78 DDGHCSEIGASTLRLGGHAVDAAVATALCLGVVN-PMASGIGGG 120 (625)
Q Consensus 78 ~~~~as~aG~~iL~~GGNAvDAAIAaa~~l~Vv~-P~~sGiGGg 120 (625)
.-..|.++|.++|++||+|.||.+++.-.+=--. -+.+|.|+-
T Consensus 12 ~~~~a~~~g~~~L~~G~sAlDAV~~av~~lEd~p~~fNAG~Gs~ 55 (162)
T 1apy_A 12 PFKNATEAAWRALASGGSALDAVESGCAMCEREQCDGSVGFGGS 55 (162)
T ss_dssp SCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTGGGSSSSSSC
T ss_pred hHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCCCcCcCCCCC
Confidence 3557999999999999999999998854442222 366777763
No 13
>1k2x_A Putative L-asparaginase; NTN hydrolase, asparginase, autoproteolysis, hydrolase; HET: CME; 1.65A {Escherichia coli} SCOP: d.153.1.5 PDB: 1jn9_A* 1t3m_A 2zal_A
Probab=84.57 E-value=1.1 Score=42.80 Aligned_cols=40 Identities=25% Similarity=0.331 Sum_probs=30.6
Q ss_pred hhHHHHHHHHHhcCCCHHHHHHHHHHHHHhhccCCCCCCC
Q 006929 80 GHCSEIGASTLRLGGHAVDAAVATALCLGVVNPMASGIGG 119 (625)
Q Consensus 80 ~~as~aG~~iL~~GGNAvDAAIAaa~~l~Vv~P~~sGiGG 119 (625)
..|.++|.++|++||+|.||.+++.-++=--.-+.+|.|+
T Consensus 32 ~~a~~~~~~~L~~g~saldAV~~av~~lEd~p~fNaG~Gs 71 (177)
T 1k2x_A 32 SAIVETGQKMLEAGESALDVVTEAVRLLEECPLFNAGIGA 71 (177)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSSSSTTC
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCCcCCc
Confidence 4567899999999999999999986666544445566654
No 14
>1p4k_A N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase; alpha beta, beta alpha, sandwich, hydrolase; 1.90A {Elizabethkingia meningoseptica} SCOP: d.153.1.5 PDB: 1p4v_A 9gaa_A 9gaf_A 9gac_A 3ljq_A 2gl9_A* 1ayy_A 2gaw_A 2gac_A* 2gaw_B 1ayy_B 2gl9_B* 2gac_B*
Probab=83.83 E-value=1.5 Score=45.21 Aligned_cols=46 Identities=28% Similarity=0.402 Sum_probs=34.4
Q ss_pred EEEc-CCh-hHHHHHHHHHhcCCCHHHHHHHHHHHHHhhcc--CCCCCCCC
Q 006929 74 VVAA-DDG-HCSEIGASTLRLGGHAVDAAVATALCLGVVNP--MASGIGGG 120 (625)
Q Consensus 74 aVas-~~~-~as~aG~~iL~~GGNAvDAAIAaa~~l~Vv~P--~~sGiGGg 120 (625)
+|+| ... .|.++|.++|++||+|.||.+++.-+|= -.| +.+|.|+-
T Consensus 7 vi~tw~~~~~a~~~~~~~L~~ggsaldAV~~av~~lE-d~p~~fnaG~Gs~ 56 (295)
T 1p4k_A 7 VLSTWNFGLHANVEAWKVLSKGGKALDAVEKGVRLVE-DDPTERSVGYGGR 56 (295)
T ss_dssp EEEESTTHHHHHHHHHHHHTTTCCHHHHHHHHHHHHH-HCTTCTTSSTTCC
T ss_pred EEEccccHHHHHHHHHHHHHcCCCHHHHHHHHHHHHh-hCCCccCcccCCC
Confidence 4555 455 7899999999999999999998855553 445 66776653
No 15
>2gez_A L-asparaginase alpha subunit; isoaspartyl aminopeptidase, NTN-hydrolase, autoproteolysis, taspase, sodium binding, hydrolase; 2.60A {Lupinus luteus}
Probab=83.71 E-value=1.3 Score=42.97 Aligned_cols=40 Identities=25% Similarity=0.439 Sum_probs=30.6
Q ss_pred hhHHHHHHHHHhcCCCHHHHHHHHHHHHHhhccCCCCCCC
Q 006929 80 GHCSEIGASTLRLGGHAVDAAVATALCLGVVNPMASGIGG 119 (625)
Q Consensus 80 ~~as~aG~~iL~~GGNAvDAAIAaa~~l~Vv~P~~sGiGG 119 (625)
..|.++|.++|++||+|.||.+++.-+|=--.-+.+|.|+
T Consensus 35 ~~a~~~g~~~L~~G~sAlDAV~~av~~lEd~p~fNaG~Gs 74 (195)
T 2gez_A 35 RHCLQIGVEALKAQKPPLDVVELVVRELENIEHFNAGIGS 74 (195)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSSSSTTC
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCCcCCc
Confidence 3567889999999999999999986666544445566655
No 16
>4gdv_A L-asparaginase; NTN enzyme, homodimer, hydrolase, L-asparagine; 1.75A {Homo sapiens} PDB: 4gdu_A 4gdt_A 4gdw_A
Probab=83.17 E-value=1.2 Score=46.21 Aligned_cols=40 Identities=30% Similarity=0.422 Sum_probs=31.1
Q ss_pred hhHHHHHHHHHhcCCCHHHHHHHHHHHHHhhccCCCCCCC
Q 006929 80 GHCSEIGASTLRLGGHAVDAAVATALCLGVVNPMASGIGG 119 (625)
Q Consensus 80 ~~as~aG~~iL~~GGNAvDAAIAaa~~l~Vv~P~~sGiGG 119 (625)
..|.++|.++|++||+|.||.+++.-+|=--.-+.+|.|+
T Consensus 30 ~~a~~~g~~~L~~ggsalDAV~~av~~lEd~p~fNaG~Gs 69 (310)
T 4gdv_A 30 VRAATVGYGILREGGSAVDAVEGAVVALEDDPEFNAGCGS 69 (310)
T ss_dssp HHHHHHHHHHHTTTCCHHHHHHHHHHHHHHSTTSSSSTTC
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHcCCCCCCccCc
Confidence 4578899999999999999998877666543335677765
No 17
>3c17_A L-asparaginase precursor; isoaspartyl peptidase, NTN-hydrolase, autoprot precursor, hydrolase; 1.95A {Escherichia coli} PDB: 2zak_A
Probab=72.59 E-value=4 Score=42.47 Aligned_cols=40 Identities=25% Similarity=0.331 Sum_probs=30.9
Q ss_pred hhHHHHHHHHHhcCCCHHHHHHHHHHHHHhhccCCCCCCC
Q 006929 80 GHCSEIGASTLRLGGHAVDAAVATALCLGVVNPMASGIGG 119 (625)
Q Consensus 80 ~~as~aG~~iL~~GGNAvDAAIAaa~~l~Vv~P~~sGiGG 119 (625)
..|.++|.++|++||+|.||.+++.-+|=--.-+.+|.|+
T Consensus 32 ~~a~~~~~~~L~~ggsalDAV~~av~~lEd~p~fNaG~Gs 71 (320)
T 3c17_A 32 SAIVETGQKMLEAGESALDVVTEAVRLLEECPLFNAGIGA 71 (320)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHSTTSSSSTTC
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHhhhhhcCCCCCCccCC
Confidence 4678899999999999999999986666443335666655
No 18
>2a8j_A Taspase 1, threonine aspartase 1; MLL, glycosylspraginase, asparaginase, hydrolase; 1.90A {Homo sapiens} PDB: 2a8i_A 2a8m_A 2a8l_A
Probab=68.61 E-value=5.3 Score=43.08 Aligned_cols=38 Identities=26% Similarity=0.401 Sum_probs=29.0
Q ss_pred hHHHHHHHHHhcCCCHHHHHHHHHHHHHhhcc-CCCCCCC
Q 006929 81 HCSEIGASTLRLGGHAVDAAVATALCLGVVNP-MASGIGG 119 (625)
Q Consensus 81 ~as~aG~~iL~~GGNAvDAAIAaa~~l~Vv~P-~~sGiGG 119 (625)
.|.++|.++|++||+|.||.+++.-.|=- .| +.+|.|+
T Consensus 67 ~A~~~a~~~L~~GgsAlDAV~~av~~lEd-~p~fNaG~Gs 105 (420)
T 2a8j_A 67 RACQKAIEKLQAGALATDAVTAALVELED-SPFTNAGMGS 105 (420)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHHHHHHH-STTSSSSTTC
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHhc-CCCCCccCCc
Confidence 45778999999999999999997555543 45 4567665
No 19
>4gdv_A L-asparaginase; NTN enzyme, homodimer, hydrolase, L-asparagine; 1.75A {Homo sapiens} PDB: 4gdu_A 4gdt_A 4gdw_A
Probab=66.82 E-value=28 Score=35.90 Aligned_cols=26 Identities=23% Similarity=0.234 Sum_probs=22.6
Q ss_pred CCCCceEEEEEcCCCCEEEEEecCCC
Q 006929 405 RDHGTSHFCIVDAERNAVSMTTTVNY 430 (625)
Q Consensus 405 ~~~~Tth~sVvD~~GnaVS~T~Si~~ 430 (625)
..+||....++|.+||..+.|+|-+.
T Consensus 166 ~~~dTVG~ValD~~G~iaaaTSTgG~ 191 (310)
T 4gdv_A 166 KNLGTVGAVALDCKGNVAYATSTGGI 191 (310)
T ss_dssp -CCCCEEEEEECTTSCEEEEEEECCS
T ss_pred cccCceeeEEEeCCCCEEEEECCCCc
Confidence 45799999999999999999999654
No 20
>1p4k_A N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase; alpha beta, beta alpha, sandwich, hydrolase; 1.90A {Elizabethkingia meningoseptica} SCOP: d.153.1.5 PDB: 1p4v_A 9gaa_A 9gaf_A 9gac_A 3ljq_A 2gl9_A* 1ayy_A 2gaw_A 2gac_A* 2gaw_B 1ayy_B 2gl9_B* 2gac_B*
Probab=66.59 E-value=31 Score=35.41 Aligned_cols=26 Identities=27% Similarity=0.291 Sum_probs=22.8
Q ss_pred CCCCceEEEEEcCCCCEEEEEecCCC
Q 006929 405 RDHGTSHFCIVDAERNAVSMTTTVNY 430 (625)
Q Consensus 405 ~~~~Tth~sVvD~~GnaVS~T~Si~~ 430 (625)
+.+||+-..++|++||..+-|+|-+.
T Consensus 148 ~~~dTVGaValD~~G~lAaaTSTgG~ 173 (295)
T 1p4k_A 148 ENHNTIGMIALDAQGNLSGACTTSGM 173 (295)
T ss_dssp SBBCCEEEEEECTTSCEEEEEEECCS
T ss_pred CCCCCEEEEEEcCCCCEEEEEccCCc
Confidence 35799999999999999999999544
No 21
>3cuq_A Vacuolar-sorting protein SNF8; ESCRT, MBV, VPS, nucleus, protein transport, transc transcription regulation, transport, endosome; 2.61A {Homo sapiens} PDB: 2zme_A
Probab=40.09 E-value=10 Score=37.61 Aligned_cols=72 Identities=24% Similarity=0.426 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHHhcCccccccccc----CC-cccCCCCeecCHHHHHHHHHHHHhCCCCcccchHHHHHHHHH----Hhc
Q 006929 207 LGQHIANKAEVILNDRGLRQVFAP----NG-KLLKSGDKCYNVELAQSLEALAEQGPEALYNGTVGEKLVKDV----REA 277 (625)
Q Consensus 207 la~~l~~~~~~l~~~p~~~~~f~~----~G-~~~~~Gd~l~~p~LA~TL~~IA~~G~~~FY~G~iA~~iv~~~----~~~ 277 (625)
|.....++...|.++|++|.-|.. =| .|+.-+.- =-+++| |...||. ++|.+|++.+ .++
T Consensus 23 L~~FA~kH~~eI~~dp~fR~~F~~mc~siGVDPlas~kg----~ws~~l------G~gdfy~-eLavqIvEvC~~tr~~n 91 (234)
T 3cuq_A 23 LEEFASKHKQEIRKNPEFRVQFQDMCATIGVDPLASGKG----FWSEML------GVGDFYY-ELGVQIIEVCLALKHRN 91 (234)
T ss_dssp HHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCCTTSCTTS----HHHHHH------CHHHHHH-HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcccccccCHHHHHHHHHHHHHcCCCcccCCcc----hhhhhc------CcchHHH-HHHHHHHHHHHHHHHhc
Confidence 344445566778888888776631 12 23332200 012222 3446887 7888888876 467
Q ss_pred CCCCCHhhhccC
Q 006929 278 GGILTIEDLRSY 289 (625)
Q Consensus 278 GG~lt~~DL~~Y 289 (625)
||+|+++||...
T Consensus 92 GGli~L~el~~~ 103 (234)
T 3cuq_A 92 GGLITLEELHQQ 103 (234)
T ss_dssp SSEEEHHHHHHH
T ss_pred CCeeEHHHHHHH
Confidence 999999998653
No 22
>1u5t_A Appears to BE functionally related to SNF7; SNF8P; ESCRT, endosomal, trafficking, protein complex, transport protein; 3.60A {Saccharomyces cerevisiae} SCOP: a.4.5.54 a.4.5.54 PDB: 1w7p_A
Probab=38.52 E-value=18 Score=35.83 Aligned_cols=32 Identities=22% Similarity=0.455 Sum_probs=25.2
Q ss_pred CCCcccchHHHHHHHHHH----hcCCCCCHhhhccCc
Q 006929 258 PEALYNGTVGEKLVKDVR----EAGGILTIEDLRSYK 290 (625)
Q Consensus 258 ~~~FY~G~iA~~iv~~~~----~~GG~lt~~DL~~Y~ 290 (625)
...||. ++|.+|++.+. ++||+|+++||...-
T Consensus 88 ~gdfy~-eLavqIvEvC~~tr~~nGGli~l~el~~~~ 123 (233)
T 1u5t_A 88 VNDFYY-EVCLKVIEICRQTKDMNGGVISFQELEKVH 123 (233)
T ss_dssp HHHHHH-HHHHHHHHHHHHHTTTSSSCEEHHHHHHTT
T ss_pred cchHHH-HHHHHHHHHHHHHHHhcCCeeEHHHHHHHH
Confidence 346887 88999998874 579999999987653
No 23
>3c17_A L-asparaginase precursor; isoaspartyl peptidase, NTN-hydrolase, autoprot precursor, hydrolase; 1.95A {Escherichia coli} PDB: 2zak_A
Probab=33.18 E-value=80 Score=32.65 Aligned_cols=26 Identities=19% Similarity=0.206 Sum_probs=22.9
Q ss_pred CCCCceEEEEEcCCCCEEEEEecCCC
Q 006929 405 RDHGTSHFCIVDAERNAVSMTTTVNY 430 (625)
Q Consensus 405 ~~~~Tth~sVvD~~GnaVS~T~Si~~ 430 (625)
..+||+-..++|++||..+-|+|-+.
T Consensus 174 ~~~dTVGaValD~~G~lAaaTSTGG~ 199 (320)
T 3c17_A 174 QKMGAVGAVALDLDGNLAAATSTGGM 199 (320)
T ss_dssp TTCCCEEEEEECTTSCEEEEEEECCC
T ss_pred CCCCCEEEEEEeCCCCEEEEEcCCCc
Confidence 45799999999999999999999654
No 24
>1u5t_B Defective in vacuolar protein sorting; VPS36P; ESCRT, endosomal, trafficking, protein complex, transport protein; 3.60A {Saccharomyces cerevisiae} SCOP: a.4.5.54 a.4.5.54
Probab=26.49 E-value=20 Score=33.73 Aligned_cols=27 Identities=15% Similarity=0.244 Sum_probs=18.4
Q ss_pred CcccchHHHHHHHHHH---h-----cCC-CCCHhhhc
Q 006929 260 ALYNGTVGEKLVKDVR---E-----AGG-ILTIEDLR 287 (625)
Q Consensus 260 ~FY~G~iA~~iv~~~~---~-----~GG-~lt~~DL~ 287 (625)
.||. ++|.+|++.+. + +|| +|++.||-
T Consensus 11 ~f~~-ELa~qi~e~c~~~~~~~~~~~GG~~I~L~dl~ 46 (169)
T 1u5t_B 11 LFLD-EIAREIYEFTLSEFKDLNSDTNYMIITLVDLY 46 (169)
T ss_dssp THHH-HHHHHHHHHHHTTTTTSSSCCCCCCEETTHHH
T ss_pred HHHH-HHHHHHHHHHhhcchhhHHhcCceeEEHHHHH
Confidence 3555 78888888877 4 477 66666653
No 25
>1apy_B Aspartylglucosaminidase; glycosylasparaginase, hydrolase; HET: NAG BMA; 2.00A {Homo sapiens} SCOP: d.153.1.5 PDB: 1apz_B*
Probab=25.96 E-value=54 Score=29.93 Aligned_cols=22 Identities=14% Similarity=0.125 Sum_probs=19.4
Q ss_pred ceEEEEEcCCCCEEEEEecCCC
Q 006929 409 TSHFCIVDAERNAVSMTTTVNY 430 (625)
Q Consensus 409 Tth~sVvD~~GnaVS~T~Si~~ 430 (625)
|....++|++||..+-|+|-+.
T Consensus 1 TVGaValD~~G~lAaaTSTGG~ 22 (141)
T 1apy_B 1 TIGMVVIHKTGHIAAGTSTNGI 22 (141)
T ss_dssp CEEEEEECTTSCEEEEEEECCS
T ss_pred CEEEEEEeCCCCEEEEECCCCc
Confidence 6788999999999999999554
No 26
>1k2x_B Putative L-asparaginase; NTN hydrolase, asparginase, autoproteolysis, hydrolase; HET: CME; 1.65A {Escherichia coli} SCOP: d.153.1.5 PDB: 1jn9_B* 1t3m_B 2zal_B
Probab=24.97 E-value=59 Score=29.74 Aligned_cols=22 Identities=23% Similarity=0.161 Sum_probs=19.4
Q ss_pred ceEEEEEcCCCCEEEEEecCCC
Q 006929 409 TSHFCIVDAERNAVSMTTTVNY 430 (625)
Q Consensus 409 Tth~sVvD~~GnaVS~T~Si~~ 430 (625)
|+...++|++||..+-|+|-+.
T Consensus 1 TVGaValD~~G~iAaaTSTgG~ 22 (143)
T 1k2x_B 1 TVGAVALDLDGNLAAATSTGGM 22 (143)
T ss_dssp CEEEEEECTTSCEEEEEEECCC
T ss_pred CeEEEEEeCCCCEEEEECCCCc
Confidence 6778999999999999999654
No 27
>3cuq_B Vacuolar protein-sorting-associated protein 36; ESCRT, MBV, VPS, nucleus, protein transport, transc transcription regulation, transport, endosome; 2.61A {Homo sapiens} PDB: 2zme_B
Probab=24.72 E-value=23 Score=34.57 Aligned_cols=28 Identities=18% Similarity=0.377 Sum_probs=22.0
Q ss_pred CCcccchHHHHHHHHH----HhcCCCCCHhhhc
Q 006929 259 EALYNGTVGEKLVKDV----REAGGILTIEDLR 287 (625)
Q Consensus 259 ~~FY~G~iA~~iv~~~----~~~GG~lt~~DL~ 287 (625)
..||. ++|.+|++.+ .++||+|++.||.
T Consensus 71 ~~f~~-ELa~qi~e~c~~~~~~~GG~I~L~dl~ 102 (218)
T 3cuq_B 71 TQYHM-QLAKQLAGILQVPLEERGGIMSLTEVY 102 (218)
T ss_dssp CHHHH-HHHHHHHHHHHHHHHHTTSEEEHHHHH
T ss_pred cHHHH-HHHHHHHHHHHHHHHhCCCeEEHHHHH
Confidence 35776 8999998876 4679999888875
No 28
>2gez_B L-asparaginase beta subunit; isoaspartyl aminopeptidase, NTN-hydrolase, autoproteolysis, taspase, sodium binding, hydrolase; 2.60A {Lupinus luteus}
Probab=24.72 E-value=61 Score=29.26 Aligned_cols=22 Identities=32% Similarity=0.228 Sum_probs=19.2
Q ss_pred ceEEEEEcCCCCEEEEEecCCC
Q 006929 409 TSHFCIVDAERNAVSMTTTVNY 430 (625)
Q Consensus 409 Tth~sVvD~~GnaVS~T~Si~~ 430 (625)
|+-..++|++||..+-|+|-+.
T Consensus 1 TVGaValD~~G~iAaatSTgG~ 22 (133)
T 2gez_B 1 TVGCVAVDSHGNLASATSTGGL 22 (133)
T ss_dssp CEEEEEECTTCCEEEEEEECCS
T ss_pred CEEEEEEeCCCCEEEEECCCCc
Confidence 6778999999999999999654
No 29
>3gxq_A Putative regulator of transfer genes ARTA; ribbon-helix-helix, plasmid, DNA binding protein/DNA complex; HET: DNA; 2.35A {Staphylococcus aureus subsp}
Probab=23.33 E-value=27 Score=25.59 Aligned_cols=16 Identities=31% Similarity=0.447 Sum_probs=12.8
Q ss_pred CChhHHHHHHHHHhcC
Q 006929 78 DDGHCSEIGASTLRLG 93 (625)
Q Consensus 78 ~~~~as~aG~~iL~~G 93 (625)
|-.-.|++|++||++|
T Consensus 34 dfdnvsqagreilkkg 49 (54)
T 3gxq_A 34 DFDNVSQAGREILKKG 49 (54)
T ss_dssp STTCHHHHHHHHHHHH
T ss_pred cchhHHHHHHHHHHHH
Confidence 3345799999999987
No 30
>2q6k_A Chlorinase; complex with adenosine, biosynthetic protein; HET: ADN; 1.55A {Salinispora tropica} PDB: 2q6i_A* 2q6o_A* 2q6l_A*
Probab=21.71 E-value=45 Score=33.94 Aligned_cols=34 Identities=12% Similarity=0.253 Sum_probs=26.5
Q ss_pred CCceEEEEEcC----CCCEEEEEecCCCCCCceeeeCCccee
Q 006929 407 HGTSHFCIVDA----ERNAVSMTTTVNYAFGAGILSPSTGIV 444 (625)
Q Consensus 407 ~~Tth~sVvD~----~GnaVS~T~Si~~~FGSgv~~p~tGi~ 444 (625)
.||.|++|||. +..+|.+-+.-+.+ ++.|..|++
T Consensus 63 ~gTVhv~VVDPGVGt~Rr~i~v~~~~~~~----fVgPDNGll 100 (283)
T 2q6k_A 63 AHTVICAYVYPETGTATHTIAVRNEKGQL----LVGPNNGLL 100 (283)
T ss_dssp TTEEEEEECCTTTTSSCCEEEEEETTSCE----EEEESSSTT
T ss_pred CCCEEEEEECCCCCCCCceEEEEEcCCcE----EEEcCCChh
Confidence 58999999998 89999997633333 688887763
Done!