Query 006930
Match_columns 625
No_of_seqs 369 out of 2162
Neff 8.9
Searched_HMMs 29240
Date Mon Mar 25 12:43:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006930.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006930hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3i6s_A Subtilisin-like proteas 100.0 1.2E-85 4E-90 731.6 34.1 494 110-625 1-497 (649)
2 3vta_A Cucumisin; subtilisin-l 100.0 2.2E-75 7.4E-80 651.6 34.8 472 110-625 1-477 (621)
3 1xf1_A C5A peptidase, SCP; hyd 100.0 3.1E-65 1.1E-69 592.2 30.8 437 120-625 4-479 (926)
4 3afg_A Subtilisin-like serine 100.0 5.2E-62 1.8E-66 533.3 28.8 365 33-623 33-417 (539)
5 2z2z_A TK-subtilisin precursor 100.0 3E-60 1E-64 503.5 20.2 342 35-623 2-391 (395)
6 3t41_A Epidermin leader peptid 100.0 1.4E-57 4.9E-62 495.6 25.2 355 34-624 43-465 (471)
7 2p4e_P Proprotein convertase s 100.0 7.3E-60 2.5E-64 517.9 4.6 364 35-622 75-464 (692)
8 1r6v_A Subtilisin-like serine 100.0 7E-56 2.4E-60 489.9 22.9 365 31-624 27-439 (671)
9 1dbi_A AK.1 serine protease; h 100.0 8.7E-54 3E-58 432.3 21.3 266 116-623 12-279 (280)
10 1gci_A Subtilisin; hydrolase, 100.0 4.7E-54 1.6E-58 431.4 18.4 263 116-623 5-269 (269)
11 1r0r_E Subtilisin carlsberg; h 100.0 3.6E-54 1.2E-58 434.0 16.5 263 117-623 6-274 (274)
12 1to2_E Subtilisin BPN'; serine 100.0 1.2E-53 4.1E-58 431.5 18.6 266 116-624 5-276 (281)
13 4h6x_A Thiazoline oxidase/subt 100.0 5.2E-55 1.8E-59 456.7 5.6 306 121-623 19-337 (357)
14 1thm_A Thermitase; hydrolase(s 100.0 5.7E-53 1.9E-57 426.4 19.8 265 116-623 12-278 (279)
15 2x8j_A Intracellular subtilisi 100.0 3.8E-53 1.3E-57 437.0 14.7 271 116-623 22-310 (327)
16 1y9z_A Alkaline serine proteas 100.0 5.8E-52 2E-56 446.2 23.7 373 117-623 6-426 (441)
17 2ixt_A 36KDA protease; serine 100.0 1.4E-51 4.6E-56 424.0 23.5 289 116-619 7-310 (310)
18 3zxy_A Subtilisin-like protein 100.0 1.6E-52 5.6E-57 424.7 13.7 266 129-623 3-274 (282)
19 2z30_A TK-subtilisin; thermoco 100.0 6.1E-52 2.1E-56 427.6 15.3 271 116-623 9-316 (320)
20 4h6w_A N-terminal cyanobactin 100.0 5.4E-52 1.8E-56 426.5 12.8 274 121-623 9-287 (306)
21 3lpc_A APRB2; protease, subtil 100.0 1.8E-50 6.1E-55 421.3 17.5 290 121-623 20-336 (340)
22 2iy9_A SUBA; toxin, shiga, pla 100.0 7.8E-51 2.7E-55 424.8 14.7 276 116-623 24-328 (347)
23 1wmd_A Protease; alpha-beta hy 100.0 2.7E-50 9.3E-55 433.0 18.1 291 122-623 10-317 (434)
24 1sh7_A Extracellular subtilisi 100.0 1.2E-49 4E-54 402.4 20.3 237 123-592 19-258 (284)
25 2b6n_A Proteinase K; S binding 100.0 1E-48 3.5E-53 395.1 19.6 238 123-591 21-261 (278)
26 4dzt_A Aqualysin-1, aqualysin- 100.0 2E-48 6.9E-53 393.2 21.5 238 122-592 20-260 (276)
27 2pwa_A Proteinase K; structure 100.0 8.5E-49 2.9E-53 395.1 16.6 239 129-620 27-273 (279)
28 1p8j_A Furin precursor; prohor 100.0 3.9E-48 1.3E-52 419.6 18.7 293 121-623 26-329 (471)
29 2qtw_B Proprotein convertase s 100.0 8.1E-48 2.8E-52 412.1 18.5 276 125-622 18-312 (546)
30 2id4_A Kexin; KEX2, kexin, fur 100.0 1.5E-47 5.2E-52 417.6 15.9 284 122-623 43-341 (503)
31 3f7m_A Alkaline serine proteas 100.0 1.1E-46 3.7E-51 381.2 16.9 229 125-591 25-261 (279)
32 2oxa_A Extracellular serine pr 100.0 1.4E-46 4.9E-51 419.3 18.2 295 122-623 59-424 (600)
33 3hjr_A Extracellular serine pr 100.0 8.7E-45 3E-49 406.6 19.3 295 122-623 59-424 (600)
34 3lxu_X Tripeptidyl-peptidase 2 100.0 1.7E-44 5.8E-49 415.0 18.6 240 216-623 267-522 (1354)
35 1t1e_A Kumamolisin; proenzyme, 99.9 5.1E-27 1.7E-31 256.2 4.1 96 247-350 274-383 (552)
36 1ga6_A Serine-carboxyl protein 99.9 1.6E-22 5.5E-27 210.3 10.8 102 248-350 90-206 (372)
37 3edy_A Tripeptidyl-peptidase 1 99.1 7.8E-11 2.7E-15 127.6 9.5 101 248-350 262-374 (544)
38 3cnq_P Subtilisin BPN'; unclea 98.9 2.5E-09 8.5E-14 85.3 6.9 74 32-112 5-79 (80)
39 2w2n_P Proprotein convertase s 98.9 1E-09 3.5E-14 93.6 3.7 77 32-108 34-113 (114)
40 2qtw_A Proprotein convertase s 98.7 9.7E-09 3.3E-13 88.5 4.3 77 32-108 44-123 (124)
41 1v5i_B POIA1, IA-1=serine prot 98.7 1.7E-08 5.8E-13 79.3 5.3 70 36-108 3-75 (76)
42 3icu_A E3 ubiquitin-protein li 98.5 5.6E-07 1.9E-11 83.2 12.3 94 394-487 82-187 (194)
43 2z30_B TK-subtilisin; thermoco 98.0 1.1E-05 3.6E-10 61.0 6.3 61 36-107 2-63 (65)
44 2ek8_A Aminopeptidase; metallo 95.7 0.089 3.1E-06 55.3 13.3 69 406-474 111-182 (421)
45 3iib_A Peptidase M28; YP_92679 94.9 0.13 4.4E-06 54.4 11.3 103 378-487 104-227 (444)
46 3kas_A Transferrin receptor pr 93.8 0.14 4.8E-06 56.4 8.7 69 406-474 128-230 (640)
47 3fed_A Glutamate carboxypeptid 91.7 0.32 1.1E-05 54.2 7.9 70 406-475 151-268 (707)
48 3lxu_X Tripeptidyl-peptidase 2 88.3 0.31 1.1E-05 57.4 4.5 25 129-153 32-56 (1354)
49 1y9z_A Alkaline serine proteas 83.4 0.42 1.4E-05 50.4 2.1 31 494-532 182-212 (441)
50 1wgl_A TOLL-interacting protei 40.2 11 0.00037 27.1 1.4 30 561-590 10-39 (59)
51 1ni7_A ER75, hypothetical prot 39.7 23 0.00077 31.0 3.6 34 548-582 77-110 (155)
52 3g0m_A Cysteine desulfuration 34.8 22 0.00074 30.6 2.7 34 547-581 69-102 (141)
53 1otr_A Protein CUE2; protein-p 20.5 99 0.0034 21.1 3.4 26 564-589 8-33 (49)
54 1wlo_A SUFE protein; structura 20.0 33 0.0011 29.3 1.1 33 548-581 64-96 (136)
No 1
>3i6s_A Subtilisin-like protease; PA-domain, FN3-domain, hydrolase; HET: NAG FUC; 2.50A {Solanum lycopersicum} PDB: 3i74_A*
Probab=100.00 E-value=1.2e-85 Score=731.58 Aligned_cols=494 Identities=45% Similarity=0.756 Sum_probs=445.9
Q ss_pred cCCCcccccccccCCCccCCCCCCccEEEEcccccCCCCCCCCCCCCCCCCCCccccccccccccccCCCcceeeeeeec
Q 006930 110 TTRSPQFLGLRNQQGLWSESDYGSDVIIGVFDTGIWPERRSFSDLNIGSIPSKWKGVCQVGVKFTAKNCNKKIIGARFFS 189 (625)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~tG~gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~ 189 (625)
++++|+++++.+...+|..+.+|+||+|||||||||++||+|.+.++++++..|+|.|+.|.+|+...||+|+++.++|.
T Consensus 1 Tt~s~~flgl~~~~~~w~~~~~G~gViVaViDTGId~~Hp~f~d~g~~p~p~~wkg~c~~g~~f~~~~cN~kiig~~~f~ 80 (649)
T 3i6s_A 1 TTHTSDFLKLNPSSGLWPASGLGQDVIVAVLDSGIWPESASFQDDGMPEIPKRWKGICKPGTQFNASMCNRKLIGANYFN 80 (649)
T ss_dssp CCSHHHHTTCCSSSSHHHHHGGGTTCEEEEEESCBCTTSGGGCCTTCCCCCTTCCCCBCCBTTBCTTSCCSSEEEEEECC
T ss_pred CCCChHHcCCCCchhhHhccCCCCCCEEEEEccCCCCCChhhccCCCCCCccccccccccCccccccccccceeeeEecc
Confidence 35788999998778899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCCCCccccCCCCCCCCCccccchhhccccCCCCCcccccCccccccCCccceeeeeeccCCCCCC
Q 006930 190 KGHEAAGGSAGPIGGGINETVEFMSPRDADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKARLAVYKVCWKNAGCF 269 (625)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~~~~~ 269 (625)
.+++.... +...+..++.|..||||||||||||+.+++.+.+|+..|.+.||||+|+|+.+|+++. .++.
T Consensus 81 ~~~~~~~~---------~~~~~~~~~~D~~GHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~-~g~~ 150 (649)
T 3i6s_A 81 KGILANDP---------TVNITMNSARDTDGHGTHCASITAGNFAKGVSHFGYAPGTARGVAPRARLAVYKFSFN-EGTF 150 (649)
T ss_dssp HHHHHHCT---------TCCCTTCSSBCSSSHHHHHHHHHHCCCEEEEEETTEEEEEECCSSTTCEEEEEECEET-TEEC
T ss_pred Cccccccc---------ccccCCCCCCCCCCcHHHHHHHHhCCCCcCccccccccCceeEECCCCEEEEEeccCC-CCCC
Confidence 87653321 1223445678899999999999999998888888988888999999999999999988 4588
Q ss_pred hhhHHHHHHHHHHcCCCEEEeccCCCCCCCCCCCCChHHhhHHHhhhCCcEEEEecCCCCCCCCcccCCCCceEEeecCC
Q 006930 270 DSDILAAFDAAVNDGVDVISISIGGGDGISSPYYLDPIAIGSYGAASRGVFVSSSAGNDGPNGMSVTNLAPWIVTVGAGT 349 (625)
Q Consensus 270 ~~~i~~ai~~a~~~~~~VIn~S~G~~~g~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~~~vitVga~~ 349 (625)
.+++++||+||+++|++|||||||.. ..++..+.+..++++|.++|++||+||||+|....++++.+||+|+|||++
T Consensus 151 ~~~i~~Ai~~A~~~gvdVIn~SlG~~---~~~~~~~~i~~a~~~A~~~Gi~vV~AAGN~G~~~~t~~~~ap~vitVgAst 227 (649)
T 3i6s_A 151 TSDLIAAMDQAVADGVDMISISYGYR---FIPLYEDAISIASFGAMMKGVLVSASAGNRGPGIGSLNNGSPWILCVASGH 227 (649)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECCCCC---SCCGGGCHHHHHHHHHHHTTCEEEEECCSCTTSTTCCSCCCTTSEEEEEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEeCCccC---CcccchhHHHHHHHHHHhCCcEEEEeCCCCCCCCCccCCCCCceEEEeeee
Confidence 99999999999999999999999987 566778899999999999999999999999999889999999999999999
Q ss_pred CCCceeeEEEeCCCeeeeeeecccCCCCCCceeeEEecCCCCCcccccccCCCCCCCcc--CceEEEEecCCCchhhHHH
Q 006930 350 IDRNFPAEVRLGDGRRLSGVSLYAGAPLSEKMYPLIYPGKSGVLSASLCMENSLDPNLV--RGKIVICDRGSSPRVAKGL 427 (625)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~--~g~i~~~~~g~~~~~~~~~ 427 (625)
+|+.|+..+.+++++++.+.+++..... ...+|++|.. ....|....+++..+ +|+|++|+++.|.+.++..
T Consensus 228 ~dr~f~~~~~lgng~~~~g~sl~~~~~~-~~~~plv~~~-----~~~~C~~~~l~~~~vdl~GkIvlc~~g~~~~~~k~~ 301 (649)
T 3i6s_A 228 TDRTFAGTLTLGNGLKIRGWSLFPARAF-VRDSPVIYNK-----TLSDCSSEELLSQVENPENTIVICDDNGDFSDQMRI 301 (649)
T ss_dssp CSCEEEEEEEETTSCEEEEECCCSSCBC-EEEEEEECCT-----TTTTCCCHHHHTTSSSGGGCEEEECCCSCHHHHHHH
T ss_pred cccceeeEEEeCCCcEEeeeecccCccc-CcceeeEecc-----cccccccccccccccccCCcEEEEeCCCccHHHHHH
Confidence 9999999999999999999999876644 6789999965 467898877777766 9999999999999999999
Q ss_pred HHHHcCceEEEEEeCCCCCCccccCCCccCEEEeChhhHHHHHHHHHcCCCCeEEEEecceeecCcCCCcccccCCCCCC
Q 006930 428 VVKKAGGVGMILANGISNGEGLVGDAHLLPACALGSDEGDAVKAYISSTANPTATIDFKGTILGIKPAPVVASFSARGPN 507 (625)
Q Consensus 428 ~~~~~g~~g~~~~~~~~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fSs~Gp~ 507 (625)
++.++|+.|++++++. ..+..+.+.+|++.++..++..|++|+.++.++++++.+..+.......+.+++||||||+
T Consensus 302 ~~~~~Ga~g~i~~n~~---~~~~~~~~~~P~~~v~~~~g~~i~~yi~s~~~~~a~i~~~~t~~~~~~~~~va~FSSrGP~ 378 (649)
T 3i6s_A 302 ITRARLKAAIFISEDP---GVFRSATFPNPGVVVNKKEGKQVINYVKNSVTPTATITFQETYLDTKPAPVVAASSARGPS 378 (649)
T ss_dssp HHHHTCSEEEEECCCG---GGGGCCCCCSCEEEECHHHHHHHHHHHHTCSSCEEEEEEEEEECCCSSCCEECTTSCCSSC
T ss_pred HHHhcCceEEEEecCc---cccccccCcCCEEEEcHHHHHHHHHHHhcCCCceEEEeecceeeccCCCCcccccCCCCCC
Confidence 9999999999999887 4556677899999999999999999999999999999999999888889999999999999
Q ss_pred CCCCCCCCCccccCCCcEEeeecCCCCCCCCCCCc-ccccccccCchhhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHhc
Q 006930 508 GLNPEILKPDLIAPGVNILAAWTEAVGPTGLDSDL-RKTEFNILSGTSMACPHVSGAAALLKSAHPDWSPAAIRSAMMTT 586 (625)
Q Consensus 508 ~~~~~~~KPdi~APG~~i~s~~~~~~~~~~~~~~~-~~~~y~~~sGTSmAaP~VAG~aALl~~~~p~lt~~~vk~~L~~t 586 (625)
.+.++++||||+|||.+|+++++....+.....+. ....|..++|||||||||||++|||+|+||+|+|++||++|++|
T Consensus 379 ~~~~~ilKPDI~APG~~Ilsa~~~~~~~~~~~~d~~~~~~y~~~SGTSMAaPhVAGvaALlks~~P~~Spa~IksaLmtT 458 (649)
T 3i6s_A 379 RSYLGISKPDILAPGVLILAAYPPNVFATSIGTNILLSTDYILESGTSMAAPHAAGIAAMLKAAHPEWSPSAIRSAMMTT 458 (649)
T ss_dssp TTCTTSCSCCEEEECSSEEEECCTTSCCEEETTTEEECCSEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHT
T ss_pred CCCCCccCCeEEeCCCCeEeecCCCCCccccccccccccceecccccccccHHHHHHHHHHHHhCCCCCHHHHHHHHhcc
Confidence 98889999999999999999998864433322221 23489999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCccCCCCCCCCCCcccccccCccccCCCC
Q 006930 587 ASIVDNSNQPMTDEATGNASTPYDFGAGHVNLDRAMDPG 625 (625)
Q Consensus 587 A~~~~~~~~~~~~~~~~~~~~~~~~G~G~ld~~~Al~~~ 625 (625)
|.+++..+.++.+...+.+++++.||+|+||+.+|++||
T Consensus 459 A~~~~~~g~~i~~~~~~~~a~~~~~GaG~vn~~~A~~pG 497 (649)
T 3i6s_A 459 ADPLDNTRKPIKDSDNNKAATPLDMGAGHVDPNRALDPG 497 (649)
T ss_dssp CBCBCTTSSBCEETTTSSBCCHHHHTTCBCCHHHHTCCS
T ss_pred cccccCCCCcccccccCCcCCcCCCCeeeeCHHHhcCcc
Confidence 999999999888876778889999999999999999998
No 2
>3vta_A Cucumisin; subtilisin-like fold, serine protease, hydrolase; HET: DFP NAG FUC BMA MAN; 2.75A {Cucumis melo}
Probab=100.00 E-value=2.2e-75 Score=651.61 Aligned_cols=472 Identities=44% Similarity=0.784 Sum_probs=401.2
Q ss_pred cCCCcccccccccCCCccCCCCCCccEEEEcccccCCCCCCCCCCCCCCCCCCccccccccccccccCCCcceeeeeeec
Q 006930 110 TTRSPQFLGLRNQQGLWSESDYGSDVIIGVFDTGIWPERRSFSDLNIGSIPSKWKGVCQVGVKFTAKNCNKKIIGARFFS 189 (625)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~tG~gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~ 189 (625)
++++|+++|++. .+|....+|+||+|||||||||++||+|.++++++++..|+|.|+.+.+|. ||+|+++.++|.
T Consensus 1 tt~s~~flGl~~--~~~~~~~~G~gViVgViDTGId~~Hp~f~d~g~~~~~~~w~g~~~~~~~~~---~n~k~ig~~~~~ 75 (621)
T 3vta_A 1 TTRSWDFLGFPL--TVPRRSQVESNIVVGVLDTGIWPESPSFDDEGFSPPPPKWKGTCETSNNFR---CNRKIIGARSYH 75 (621)
T ss_dssp CCSHHHHTTCCT--TCCCCHHHHTTCEEEEEESCBCTTSGGGCCTTCCCCCTTCCCCBCCSSSCC---CCSSEEEEEECC
T ss_pred CCCChhHcCCCc--cccccCCCCCCCEEEEEecCCCCCChhhcCCCCCCcccccccccccCCCcc---cCcceeeeeecc
Confidence 357889999864 678888899999999999999999999999999999999999999988874 899999999998
Q ss_pred ccccccCCCCCCCCCCCCCccccCCCCCCCCCccccchhhccccCCCCCcccccCccccccCCccceeeeeeccCCCCCC
Q 006930 190 KGHEAAGGSAGPIGGGINETVEFMSPRDADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKARLAVYKVCWKNAGCF 269 (625)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~~~~~ 269 (625)
.++.... .+...++|++||||||||||||+..+..+.+|+..+.+.||||+|+|+++|++.+ .++.
T Consensus 76 ~~~~~~~-------------~~~~~p~D~~GHGTHvAgi~AG~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~-~g~~ 141 (621)
T 3vta_A 76 IGRPISP-------------GDVNGPRDTNGHGTHTASTAAGGLVSQANLYGLGLGTARGGVPLARIAAYKVCWN-DGCS 141 (621)
T ss_dssp CSSSCCT-------------TCCSSSBCSSSHHHHHHHHHHCCCEEEEEETTEEEEEECCSCTTSEEEEEECEET-TEEC
T ss_pred cCCccCC-------------CCCCCCCCCCcCHHHHHHHHhCcCCCCccccccccccEEEECCCCEEEEEEeecC-CCCC
Confidence 7654322 2345678999999999999999988877888888888999999999999999998 5678
Q ss_pred hhhHHHHHHHHHHcCCCEEEeccCCCCCCCCCCCCChHHhhHHHhhhCCcEEEEecCCCCCCCCcccCCCCceEEeecCC
Q 006930 270 DSDILAAFDAAVNDGVDVISISIGGGDGISSPYYLDPIAIGSYGAASRGVFVSSSAGNDGPNGMSVTNLAPWIVTVGAGT 349 (625)
Q Consensus 270 ~~~i~~ai~~a~~~~~~VIn~S~G~~~g~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~~~vitVga~~ 349 (625)
.+++++||+||+++|++|||||||+.. ...+..++++.+++.+.++|+++|+||||+|+...++++.+||+++|++++
T Consensus 142 ~~di~~a~~~a~~~g~dVin~SlG~~~--~~~~~~~~~~~~~~~a~~~Gi~vv~aAGN~g~~~~t~~~~a~~~~~v~ast 219 (621)
T 3vta_A 142 DTDILAAYDDAIADGVDIISLSVGGAN--PRHYFVDAIAIGSFHAVERGILTSNSAGNGGPNFFTTASLSPWLLSVAAST 219 (621)
T ss_dssp HHHHHHHHHHHHHHTCSEEEECCCCCC--GGGGGGCTHHHHHHHHHTTTCEEEEECCSCCSSTTCCCCCCTTSEEEEEEC
T ss_pred HHHHHHHHHHHHHhCCCEEEecCCCCC--CCCcCCcHHHHHHHHHHHCCCEEEEeCCCCCCCCcccCCCCCCceeEEEee
Confidence 899999999999999999999999874 344567788889999999999999999999999999999999999999999
Q ss_pred CCCceeeEEEeCCCeeeeeeecccCCCCCCceeeEEecCC-----CCCcccccccCCCCCCCccCceEEEEecCCCchhh
Q 006930 350 IDRNFPAEVRLGDGRRLSGVSLYAGAPLSEKMYPLIYPGK-----SGVLSASLCMENSLDPNLVRGKIVICDRGSSPRVA 424 (625)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~c~~~~~~~~~~~g~i~~~~~g~~~~~~ 424 (625)
.++.+...+.++++..+.+..+... ....+++++... ........|....+.+..++++|++|+++ +..
T Consensus 220 ~d~~~~~~~~~~~~~~~~~~s~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~gkivl~~~~---~~~ 293 (621)
T 3vta_A 220 MDRKFVTQVQIGNGQSFQGVSINTF---DNQYYPLVSGRDIPNTGFDKSTSRFCTDKSVNPNLLKGKIVVCEAS---FGP 293 (621)
T ss_dssp CSEEEEEEEEETTSCEEEEBCCCCS---CCEEECEEETTTSCCTTCCHHHHTTTCTTCSCGGGTTTSEEECSSC---CCH
T ss_pred ccccceeeEEeccCceeeeeecccC---CCcccccccccccccccccccccccccccccccccccceEEEEecC---CCh
Confidence 9999999999999999888776543 245666666544 22345567888888999999999999765 445
Q ss_pred HHHHHHHcCceEEEEEeCCCCCCccccCCCccCEEEeChhhHHHHHHHHHcCCCCeEEEEecceeecCcCCCcccccCCC
Q 006930 425 KGLVVKKAGGVGMILANGISNGEGLVGDAHLLPACALGSDEGDAVKAYISSTANPTATIDFKGTILGIKPAPVVASFSAR 504 (625)
Q Consensus 425 ~~~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fSs~ 504 (625)
+..+....|+.+++++++... ..+...+|...++..++..++.++........++....+ ......+.++.||||
T Consensus 294 ~~~~~~~~Ga~gvi~~~~~~~----~~~~~~lP~~~v~~~~g~~i~~~~~~~~~~~a~~~~~~~-~~~~~~~~va~FSSr 368 (621)
T 3vta_A 294 HEFFKSLDGAAGVLMTSNTRD----YADSYPLPSSVLDPNDLLATLRYIYSIRSPGATIFKSTT-ILNASAPVVVSFSSR 368 (621)
T ss_dssp HHHHHHHTTCSEEEEECSCCS----SCCCCSSSEEEECHHHHHHHHHHHHHHSSCCEEECCCEE-EECTTCCCBCTTSCC
T ss_pred hHHhhhhcceeEEEEEecCCC----cccccccceEEECHHHHHHHHHHHhccCCcceEEecceE-eccCCCCceeeecCC
Confidence 667778889999999887554 235678999999999999999999998888777644433 334567899999999
Q ss_pred CCCCCCCCCCCCccccCCCcEEeeecCCCCCCCCCCCcccccccccCchhhhHHHHHHHHHHHHHhCCCCCHHHHHHHHH
Q 006930 505 GPNGLNPEILKPDLIAPGVNILAAWTEAVGPTGLDSDLRKTEFNILSGTSMACPHVSGAAALLKSAHPDWSPAAIRSAMM 584 (625)
Q Consensus 505 Gp~~~~~~~~KPdi~APG~~i~s~~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~p~lt~~~vk~~L~ 584 (625)
||+...++++||||+|||.+|+++++....... ......|..++|||||||||||++|||+|+||+|+|++||++|+
T Consensus 369 GP~~~~~~ilKPDI~APG~~Ilsa~~~~~~~~~---~~~~~~y~~~SGTSMAaPhVAGvaALl~q~~P~~spa~IksaLm 445 (621)
T 3vta_A 369 GPNRATKDVIKPDISGPGVEILAAWPSVAPVGG---IRRNTLFNIISGTSMSCPHITGIATYVKTYNPTWSPAAIKSALM 445 (621)
T ss_dssp CSCTTCTTSCSCCEEEECSSEEEECCSSSCBTT---BCCCCSEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHH
T ss_pred CCCCCCCCeeccccccCCcceEeecCccccccC---cCCCCcceEecCccccchhhhhHHHHHHHHCCCCCHHHHHHHHH
Confidence 999877799999999999999999986543222 22334799999999999999999999999999999999999999
Q ss_pred hccccccCCCCCCccCCCCCCCCCCcccccccCccccCCCC
Q 006930 585 TTASIVDNSNQPMTDEATGNASTPYDFGAGHVNLDRAMDPG 625 (625)
Q Consensus 585 ~tA~~~~~~~~~~~~~~~~~~~~~~~~G~G~ld~~~Al~~~ 625 (625)
+||++++..+ .+..++.||+|+||+.+|++||
T Consensus 446 tTA~~~~~~~---------~~~~~~~~GaG~v~~~~A~~pG 477 (621)
T 3vta_A 446 TTASPMNARF---------NPQAEFAYGSGHVNPLKAVRPG 477 (621)
T ss_dssp HTCBCCCTTT---------CTTTHHHHTTCBCCHHHHSCCS
T ss_pred hcCCcccccC---------CCCCchhcCCCccCHHHhcCCC
Confidence 9999887543 3456679999999999999998
No 3
>1xf1_A C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {Streptococcus pyogenes} PDB: 3eif_A*
Probab=100.00 E-value=3.1e-65 Score=592.18 Aligned_cols=437 Identities=25% Similarity=0.342 Sum_probs=341.3
Q ss_pred cccCCCccCCCCCCccEEEEcccccCCCCCCCCCCCCCCCCCCccccccccccc----------cccCCCcceeeeeeec
Q 006930 120 RNQQGLWSESDYGSDVIIGVFDTGIWPERRSFSDLNIGSIPSKWKGVCQVGVKF----------TAKNCNKKIIGARFFS 189 (625)
Q Consensus 120 ~~~~~~~~~~~tG~gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~g~~~----------~~~~~~~~i~~~~~~~ 189 (625)
.+++.+|+.+.+|+||+|||||||||++||+|.+. ..|++.|..+..| ...+|++|+++.++|.
T Consensus 4 i~~~~~w~~~~~G~GV~VaVIDTGId~~Hp~f~~~------~~~~~~~~~~~~~~~~~~~~g~~~g~~~n~Kii~~~~~~ 77 (926)
T 1xf1_A 4 SQVKTLQEKAGKGAGTVVAVIDAGFDKNHEAWRLT------DKTKARYQSKEDLEKAKKEHGITYGEWVNDKVAYYHDYS 77 (926)
T ss_dssp TCCHHHHHHHCSCTTCEEEEEESCCTTCCCCCSCC------SCCCSSCCHHHHHHHHHHTTTCCCCBCCSSSCCEEEESC
T ss_pred cccHHHHhccCCCCCcEEEEEecCCCCCCHhHcCC------CCCcccccchhhhcccccccCcccccccCcccceeeccc
Confidence 34556899999999999999999999999999853 3455555432221 2236899999988886
Q ss_pred ccccccCCCCCCCCCCCCCccccCCCCCCCCCccccchhhccccCCCCCcccccCccccccCCccceeeeeeccCCCC-C
Q 006930 190 KGHEAAGGSAGPIGGGINETVEFMSPRDADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKARLAVYKVCWKNAG-C 268 (625)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~~~-~ 268 (625)
.+ ....|..||||||||||||+.....+. .+.+.||||+|+|+++|++++.+. +
T Consensus 78 ~~---------------------~~~~D~~gHGThVAgiiAg~~~~~~~~----~~~~~GvAP~A~l~~~kv~~~~g~~~ 132 (926)
T 1xf1_A 78 KD---------------------GKTAVDQEHGTHVSGILSGNAPSETKE----PYRLEGAMPEAQLLLMRVEIVNGLAD 132 (926)
T ss_dssp CC---------------------SCCCCSSTTTTHHHHSSCCCCCCCCSC----SCCTTTTCTTSEEEEEECCCCSCHHH
T ss_pred cC---------------------CCCCCCCCcHHHHHHHHhCCCccCccc----CCceEEECCCCEEEEEEeecCCCCCC
Confidence 52 112288999999999999987443221 134589999999999999987432 3
Q ss_pred ChhhHHHHHHHHHHcCCCEEEeccCCCCCCCCCCCCChHHhhHHHhhhCCcEEEEecCCCCCCC---------------C
Q 006930 269 FDSDILAAFDAAVNDGVDVISISIGGGDGISSPYYLDPIAIGSYGAASRGVFVSSSAGNDGPNG---------------M 333 (625)
Q Consensus 269 ~~~~i~~ai~~a~~~~~~VIn~S~G~~~g~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~g~~~---------------~ 333 (625)
..+++++||+||+++|++|||||||...+. .....+.+..++..+.++|++||+||||+|... .
T Consensus 133 ~~~~i~~Ai~~Ai~~gvdVIn~SlG~~~~~-~~~~~~~~~~ai~~A~~~GilvV~AAGN~G~~g~~~~~~~~~~p~~~tv 211 (926)
T 1xf1_A 133 YARNYAQAIRDAINLGAKVINMSFGNAALA-YANLPDETKKAFDYAKSKGVSIVTSAGNDSSFGGKTRLPLADHPDYGVV 211 (926)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEECCSSCCCT-TCCCCHHHHHHHHHHHHTTCEEEEECCSCCBTTCTTSCCBTTCCCCBCC
T ss_pred cHHHHHHHHHHHHHhCCcEEEECCCCCCCC-ccccccHHHHHHHHHHhCCcEEEEeCCCCCCcCCccccccccCCCccee
Confidence 456899999999999999999999987321 223456788888899999999999999999632 1
Q ss_pred cccCCCCceEEeecCCCCCceeeEEEe-CCCeeeeeeecccCCCC-CCceeeEEecCCCCCcccccccCCCCCCCccCce
Q 006930 334 SVTNLAPWIVTVGAGTIDRNFPAEVRL-GDGRRLSGVSLYAGAPL-SEKMYPLIYPGKSGVLSASLCMENSLDPNLVRGK 411 (625)
Q Consensus 334 ~~~~~~~~vitVga~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~ 411 (625)
..++.+||+|+|||++.++.+...+.+ +++....+..++...++ ....+++++... .|....+ .+++|+
T Consensus 212 ~~PA~~~~vitVgA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~-------g~~~~~~--~~v~Gk 282 (926)
T 1xf1_A 212 GTPAAADSTLTVASYSPDKQLTETVRVKTADQQDKEMPVLSTNRFEPNKAYDYAYANR-------GTKEDDF--KDVKGK 282 (926)
T ss_dssp CSCTTTCCSEEEEEEBCSEEEEEEEEEECTTSCEEEEEEEEESCCCTTCCEEEEECTT-------SCSTTTT--TTCTTS
T ss_pred cCcccCCceEEEeccccccccccceEEEcCCCcceeeEEEecCCCCCCceEEEEECCC-------CCCccch--hhcCCe
Confidence 234458899999999999988888877 55544444444332333 356899998654 4765555 689999
Q ss_pred EEEEecCCCchhhHHHHHHHcCceEEEEEeCCCCCCcc-ccCCCccCEEEeChhhHHHHHHHHHcCCCCeEEEEeccee-
Q 006930 412 IVICDRGSSPRVAKGLVVKKAGGVGMILANGISNGEGL-VGDAHLLPACALGSDEGDAVKAYISSTANPTATIDFKGTI- 489 (625)
Q Consensus 412 i~~~~~g~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~-~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~- 489 (625)
|++|+|+.|.+.++..++.++|+.|++++++....... ......+|++.++..++..|.. .+ ..++++..+.
T Consensus 283 ivl~~rg~~~~~~k~~~~~~~Ga~gvi~~n~~~~~~~~~~~~~~~iP~~~i~~~~g~~l~~----~~--~~ti~~~~~~~ 356 (926)
T 1xf1_A 283 IALIERGDIDFKDKIAKAKKAGAVGVLIYDNQDKGFPIELPNVDQMPAAFISRKDGLLLKD----NP--QKTITFNATPK 356 (926)
T ss_dssp EEEEECCSSCHHHHHHHHHHTTCSEEEEECSSTTCCCEECCCSTTCCEEEECHHHHHHHHH----CS--SCEEEECSSCE
T ss_pred EEEEECCCCCHHHHHHHHHhCCCcEEEEEecCCCCcccccCccccccEEEEeHHHHHHHHh----CC--ceEEEecccce
Confidence 99999999999999999999999999999887653322 2345789999999999988874 33 4555555543
Q ss_pred -ecCcCCCcccccCCCCCCCCCCCCCCCccccCCCcEEeeecCCCCCCCCCCCcccccccccCchhhhHHHHHHHHHHHH
Q 006930 490 -LGIKPAPVVASFSARGPNGLNPEILKPDLIAPGVNILAAWTEAVGPTGLDSDLRKTEFNILSGTSMACPHVSGAAALLK 568 (625)
Q Consensus 490 -~~~~~~~~~a~fSs~Gp~~~~~~~~KPdi~APG~~i~s~~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~ 568 (625)
......+.+++||||||+.+ +++||||+|||++|+++++.+ .|..++|||||||||||++|||+
T Consensus 357 ~~~~~~~~~~a~FSSrGp~~~--~~lKPDI~APG~~I~sa~~~~-------------~y~~~SGTSMAaPhVAG~aALl~ 421 (926)
T 1xf1_A 357 VLPTASGTKLSRFSSWGLTAD--GNIKPDIAAPGQDILSSVANN-------------KYAKLSGTSMSAPLVAGIMGLLQ 421 (926)
T ss_dssp EEECSSCSBCCTTSCCCBCTT--SCBSCCEEEECCCEEESSSCS-------------SSCEEESCTTHHHHHHHHHHHHH
T ss_pred ecccCCcceeccccCCCCCCC--CccCceEECCCCCEEeeccCC-------------cceecCccchhHHHHHHHHHHHH
Confidence 34455679999999999976 999999999999999999765 89999999999999999999996
Q ss_pred H----hCCCCCHHH----HHHHHHhccccccCCCCCCccCCCCCCCCCCcccccccCccccCCCC
Q 006930 569 S----AHPDWSPAA----IRSAMMTTASIVDNSNQPMTDEATGNASTPYDFGAGHVNLDRAMDPG 625 (625)
Q Consensus 569 ~----~~p~lt~~~----vk~~L~~tA~~~~~~~~~~~~~~~~~~~~~~~~G~G~ld~~~Al~~~ 625 (625)
| .+|+|+|+| ||++|++||+++...+ ...++++++||+|+||+.+|++|+
T Consensus 422 q~~k~~~P~~sp~~~~~~Iks~L~~TA~~~~~~~-------~~~~~~~~~~G~G~vn~~~A~~~~ 479 (926)
T 1xf1_A 422 KQYETQYPDMTPSERLDLAKKVLMSSATALYDED-------EKAYFSPRQQGAGAVDAKKASAAT 479 (926)
T ss_dssp HHHHHSSSSSHHHHHHHHHHHHHHHHSBCCEEGG-------GTEECCHHHHTTCBCCHHHHHHCS
T ss_pred HHHhccCCCCCHHHHHHHHHHHHHhcCCCcccCC-------CCccCChhccCCCccCHHHhcCCC
Confidence 5 599999997 9999999999875432 122456789999999999999863
No 4
>3afg_A Subtilisin-like serine protease; propeptide, thermococcus kodakaraensis, hydrolas protease; 2.00A {Thermococcus kodakarensis}
Probab=100.00 E-value=5.2e-62 Score=533.32 Aligned_cols=365 Identities=31% Similarity=0.445 Sum_probs=289.3
Q ss_pred CCcceEEEEeCCCCCCCCcchhhhhhhhhcCC-CceEEEEeccceeeEEEEeCHHHHHHH-----------hCCCCeeEE
Q 006930 33 QTVKTFIFRIDSQSKPSIFPTHYHWYSSEFAS-PVQILHTYDTVFHGFSATLSPDQAASL-----------SRHPSVLAV 100 (625)
Q Consensus 33 ~~~~~yiV~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~L-----------~~~p~V~~v 100 (625)
....+|||+||++...+. +.+.+++ +.+++++|. .+++|+++++++++++| +++|.|++|
T Consensus 33 ~~~~~~iV~~~~~~~~~~-------~~~~~~~~g~~v~~~~~-~~~g~~~~l~~~~~~~l~~~~~~~~~~~~~~~~V~~v 104 (539)
T 3afg_A 33 DQEVSTIIMFDNQADKEK-------AVEILDFLGAKIKYNYH-IIPALAVKIKVKDLLIIAGLMDTGYFGNAQLSGVQFI 104 (539)
T ss_dssp TCEEEEEEEESSHHHHHH-------HHHHHHHHTCEEEEECS-SSSEEEEEEEHHHHHHHTTCSCCC---CCCCTTEEEE
T ss_pred cCceEEEEEECCCCCHHH-------HHHHHHhcCCeEEEEee-eeeEEEEEeCHHHHHHHHhhccccccccccCCCeeEE
Confidence 446679999998653211 1222222 678999997 79999999999999999 889999999
Q ss_pred EeccccccccCCC--cccccccccCCCccCCCCCCccEEEEcccccCCCCCCCCCCCCCCCCCCccccccccccccccCC
Q 006930 101 IEDQRRQLHTTRS--PQFLGLRNQQGLWSESDYGSDVIIGVFDTGIWPERRSFSDLNIGSIPSKWKGVCQVGVKFTAKNC 178 (625)
Q Consensus 101 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~tG~gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~g~~~~~~~~ 178 (625)
+++..+++..... ...+...+++.+|..+++|+||+|||||||||++||+|.+
T Consensus 105 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~gv~VaViDtGid~~Hpdl~~------------------------- 159 (539)
T 3afg_A 105 QEDYVVKVAVETEGLDESAAQVMATNMWNLGYDGSGITIGIIDTGIDASHPDLQG------------------------- 159 (539)
T ss_dssp EECCEEECC-----------CCBCSCCBCCSCCCTTCEEEEEESBCCTTSGGGTT-------------------------
T ss_pred EecccccccCccccCCccccccCcHhHHhcCCCCCCcEEEEEecCCCCCChHHhC-------------------------
Confidence 9999888753221 1112334456789999999999999999999999999963
Q ss_pred CcceeeeeeecccccccCCCCCCCCCCCCCccccCCCCCCCCCccccchhhccccCCCCCcccccCccccccCCccceee
Q 006930 179 NKKIIGARFFSKGHEAAGGSAGPIGGGINETVEFMSPRDADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKARLAV 258 (625)
Q Consensus 179 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GvAP~A~l~~ 258 (625)
++++.++|..+ . ..+.|++||||||||||+|.+.+. .|.+.||||+|+|+.
T Consensus 160 --~i~~~~d~~~~------~--------------~~~~D~~gHGThVAgiiag~~~~~-------~g~~~GvAp~A~l~~ 210 (539)
T 3afg_A 160 --KVIGWVDFVNG------K--------------TTPYDDNGHGTHVASIAAGTGAAS-------NGKYKGMAPGAKLVG 210 (539)
T ss_dssp --TEEEEEETTTC------C--------------SSCCBSSSHHHHHHHHHHCCCGGG-------TTTTCCSCTTCEEEE
T ss_pred --CEeeeEECCCC------C--------------CCCCCCCCCHHHHHHHHhCcCccC-------CCCEEEECCCCEEEE
Confidence 35555555442 1 345788999999999999986543 233589999999999
Q ss_pred eeeccCCCCCChhhHHHHHHHHHHc----CCCEEEeccCCCCCCCCCCCCChHHhhHHHhhhCCcEEEEecCCCCCCCC-
Q 006930 259 YKVCWKNAGCFDSDILAAFDAAVND----GVDVISISIGGGDGISSPYYLDPIAIGSYGAASRGVFVSSSAGNDGPNGM- 333 (625)
Q Consensus 259 ~kv~~~~~~~~~~~i~~ai~~a~~~----~~~VIn~S~G~~~g~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~g~~~~- 333 (625)
+|++++.+.+..++++++|+||+++ +++|||||||.. ......+.+..++.++.++|++||+||||+|....
T Consensus 211 ~kv~~~~g~~~~~~i~~ai~~a~~~~~~~g~~Vin~SlG~~---~~~~~~~~l~~ai~~a~~~GvlvV~AAGN~g~~~~~ 287 (539)
T 3afg_A 211 IKVLNGQGSGSISDIINGVDWAVQNKDKYGIKVINLSLGSS---QSSDGTDSLSQAVNNAWDAGLVVVVAAGNSGPNKYT 287 (539)
T ss_dssp EECSCTTSEEEHHHHHHHHHHHHHTHHHHTEEEEEECCCCC---SCCCSCSHHHHHHHHHHHTTCEEEEECCSCCSSSSC
T ss_pred EEeecCCCCcCHHHHHHHHHHHHhhhhhcCCcEEEeCCCCC---CCCccchHHHHHHHHHHhcCCEEEEECCCCCCCCCc
Confidence 9999886667888999999999975 899999999988 33345678888889999999999999999997643
Q ss_pred -cccCCCCceEEeecCCCCCceeeEEEeCCCeeeeeeecccCCCCCCceeeEEecCCCCCcccccccCCCCCCCccCceE
Q 006930 334 -SVTNLAPWIVTVGAGTIDRNFPAEVRLGDGRRLSGVSLYAGAPLSEKMYPLIYPGKSGVLSASLCMENSLDPNLVRGKI 412 (625)
Q Consensus 334 -~~~~~~~~vitVga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~i 412 (625)
..++..+++|+|||++.
T Consensus 288 ~~~Pa~~~~vitVgA~~~-------------------------------------------------------------- 305 (539)
T 3afg_A 288 VGSPAAASKVITVGAVDK-------------------------------------------------------------- 305 (539)
T ss_dssp CCTTTTCSSSEEEEEECT--------------------------------------------------------------
T ss_pred ccCCccCCceEEEeeecC--------------------------------------------------------------
Confidence 45678899999998432
Q ss_pred EEEecCCCchhhHHHHHHHcCceEEEEEeCCCCCCccccCCCccCEEEeChhhHHHHHHHHHcCCCCeEEEEecceeecC
Q 006930 413 VICDRGSSPRVAKGLVVKKAGGVGMILANGISNGEGLVGDAHLLPACALGSDEGDAVKAYISSTANPTATIDFKGTILGI 492 (625)
Q Consensus 413 ~~~~~g~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 492 (625)
T Consensus 306 -------------------------------------------------------------------------------- 305 (539)
T 3afg_A 306 -------------------------------------------------------------------------------- 305 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCcccccCCCCCCCCCCCCCCCccccCCCcEEeeecCCCCCCCCCCCcccccccccCchhhhHHHHHHHHHHHHHhCC
Q 006930 493 KPAPVVASFSARGPNGLNPEILKPDLIAPGVNILAAWTEAVGPTGLDSDLRKTEFNILSGTSMACPHVSGAAALLKSAHP 572 (625)
Q Consensus 493 ~~~~~~a~fSs~Gp~~~~~~~~KPdi~APG~~i~s~~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~p 572 (625)
.+.+++|||+||+.+ +++||||+|||++|+++++...... ......|..++|||||||||||++|||+|++|
T Consensus 306 --~~~~a~fSs~Gp~~~--~~~kpdi~APG~~I~s~~~~~~~~~----~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~p 377 (539)
T 3afg_A 306 --YDVITDFSSRGPTAD--NRLKPEVVAPGNWIIAARASGTSMG----QPINDYYTAAPGTAMATPHVAGIAALLLQAHP 377 (539)
T ss_dssp --TSCBCSSSCCCCCTT--CBCCCSEEEECSSEEEECCTTCCCS----EECSSSEEEECSHHHHHHHHHHHHHHHHHHCT
T ss_pred --CcccccccCCCCCCC--CCCcccEecCcCCEEeeccCCCCCC----CCCcccccccCchHHHHHHHHHHHHHHHHHCC
Confidence 136799999999987 8999999999999999986542110 11122689999999999999999999999999
Q ss_pred CCCHHHHHHHHHhccccccCCCCCCccCCCCCCCCCCcccccccCccccCC
Q 006930 573 DWSPAAIRSAMMTTASIVDNSNQPMTDEATGNASTPYDFGAGHVNLDRAMD 623 (625)
Q Consensus 573 ~lt~~~vk~~L~~tA~~~~~~~~~~~~~~~~~~~~~~~~G~G~ld~~~Al~ 623 (625)
+|++++||++|++||+++...+ .++..||||+||+.+|++
T Consensus 378 ~~s~~~vk~~L~~tA~~~~~~~-----------~~~~~~G~G~vn~~~Al~ 417 (539)
T 3afg_A 378 SWTPDKVKTALIETADIVKPDE-----------IADIAYGAGRVNAYKAAY 417 (539)
T ss_dssp TCCHHHHHHHHHHHSBCSSGGG-----------CSBTTTBTCBCCHHHHHT
T ss_pred CCCHHHHHHHHHhhCccCCCCC-----------CCccCccCCccCHHHHhh
Confidence 9999999999999999875321 245689999999999986
No 5
>2z2z_A TK-subtilisin precursor; thermococcus kodakaraensis, hydrolase; 1.87A {Thermococcus kodakarensis} PDB: 2e1p_A 2zwp_A 2zwo_A
Probab=100.00 E-value=3e-60 Score=503.51 Aligned_cols=342 Identities=26% Similarity=0.351 Sum_probs=277.3
Q ss_pred cceEEEEeCCCCCCCCcchhhhhhhhhcCCCceEEEEeccceeeEEEEeCHHHHHHHhCCCCeeEEEeccccccccCC--
Q 006930 35 VKTFIFRIDSQSKPSIFPTHYHWYSSEFASPVQILHTYDTVFHGFSATLSPDQAASLSRHPSVLAVIEDQRRQLHTTR-- 112 (625)
Q Consensus 35 ~~~yiV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~p~V~~v~~~~~~~~~~~~-- 112 (625)
+.+|||+||++... .+.+++ .+.+++++|. .++++.++++++++++|+++|.|++|+++..+++....
T Consensus 2 ~~~~iV~~~~~~~~------~~~~~~---~g~~v~~~~~-~~~~~~~~~~~~~~~~L~~~p~V~~v~~~~~~~~~~~~~~ 71 (395)
T 2z2z_A 2 TIRVIVSVDKAKFN------PHEVLG---IGGHIVYQFK-LIPAVVVDVPANAVGKLKKMPGVEKVEFDHQAVLLGKPSW 71 (395)
T ss_dssp EEEEEEEECTTTCC------HHHHHH---TTCEEEEECS-SSSEEEEEEEGGGHHHHHTSTTEEEEEECCEEEECCEECC
T ss_pred cEEEEEEECCCccH------HHHHHH---cCCEEEEEec-cCCEEEEEECHHHHHHHHcCCCceEEEEeeeecccCCCCc
Confidence 57899999998431 122222 2789999998 59999999999999999999999999999988764321
Q ss_pred ---------Ccccccccc--cCCCccCCCCCCc--cEEEEcccccCCCCCCCCCCCCCCCCCCccccccccccccccCCC
Q 006930 113 ---------SPQFLGLRN--QQGLWSESDYGSD--VIIGVFDTGIWPERRSFSDLNIGSIPSKWKGVCQVGVKFTAKNCN 179 (625)
Q Consensus 113 ---------~~~~~~~~~--~~~~~~~~~tG~g--v~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 179 (625)
....|++.. .+.+|..+ +|+| |+|||||||||++||+|.+
T Consensus 72 ~~~~~~~~~~~~~w~~~~i~~~~~w~~~-~G~g~~v~VaViDtGid~~Hp~l~~-------------------------- 124 (395)
T 2z2z_A 72 LGGGSTQPAQTIPWGIERVKAPSVWSIT-DGSVSVIQVAVLDTGVDYDHPDLAA-------------------------- 124 (395)
T ss_dssp ------CCSCCCCHHHHHTTCGGGGGTC-SSCCTTCEEEEEESCBCTTCTTTGG--------------------------
T ss_pred ccccccCccccCCcchhhcCHHHHHhhc-CCCCCcEEEEEEcCCCCCCChhHhh--------------------------
Confidence 123455443 45689988 9999 9999999999999999974
Q ss_pred cceeeeeeecccccccCCCCCCCCCCCCCccccCCCCCCCCCccccchhhccccCCCCCcccccCccccccCCccceeee
Q 006930 180 KKIIGARFFSKGHEAAGGSAGPIGGGINETVEFMSPRDADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKARLAVY 259 (625)
Q Consensus 180 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GvAP~A~l~~~ 259 (625)
++...++|..+... .+..+..|+.||||||||||+|.. ++. | +.||||+|+|+.+
T Consensus 125 -~~~~~~~~~~~~~~---------------~~~~~~~d~~gHGT~vAgiia~~~-n~~---g-----~~GvAp~a~l~~~ 179 (395)
T 2z2z_A 125 -NIAWCVSTLRGKVS---------------TKLRDCADQNGHGTHVIGTIAALN-NDI---G-----VVGVAPGVQIYSV 179 (395)
T ss_dssp -GEEEEEECGGGCCB---------------CCHHHHBCSSSHHHHHHHHHHCCC-SSS---S-----CCCSSTTCEEEEE
T ss_pred -ccccCccccCCccc---------------CCCCCCCCCCCCHHHHHHHHHeec-CCC---c-----eEEECCCCEEEEE
Confidence 23334444432100 000124678999999999999973 222 2 3899999999999
Q ss_pred eeccCCCCCChhhHHHHHHHHHHc--------------------CCCEEEeccCCCCCCCCCCCCChHHhhHHHhhhCCc
Q 006930 260 KVCWKNAGCFDSDILAAFDAAVND--------------------GVDVISISIGGGDGISSPYYLDPIAIGSYGAASRGV 319 (625)
Q Consensus 260 kv~~~~~~~~~~~i~~ai~~a~~~--------------------~~~VIn~S~G~~~g~~~~~~~~~~~~~~~~a~~~Gi 319 (625)
|++++.+.+..++++++|+|++++ +++|||||||... ....+..++.++.++|+
T Consensus 180 kv~~~~g~~~~~~i~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~Vin~S~G~~~------~~~~~~~ai~~a~~~gv 253 (395)
T 2z2z_A 180 RVLDARGSGSYSDIAIGIEQAILGPDGVADKDGDGIIAGDPDDDAAEVISMSLGGPA------DDSYLYDMIIQAYNAGI 253 (395)
T ss_dssp ECSCTTSEEEHHHHHHHHHHHHHTTTTCSSTTCSSCCTTCTTSCCCSEEEECEEBSC------CCHHHHHHHHHHHHTTC
T ss_pred EEecCCCCccHHHHHHHHHHHHhCccccccccccccccccccCCCCeEEEecCCCCC------CCHHHHHHHHHHHHCCC
Confidence 999886667888999999999998 9999999999872 24567778888999999
Q ss_pred EEEEecCCCCCCCCcccCCCCceEEeecCCCCCceeeEEEeCCCeeeeeeecccCCCCCCceeeEEecCCCCCccccccc
Q 006930 320 FVSSSAGNDGPNGMSVTNLAPWIVTVGAGTIDRNFPAEVRLGDGRRLSGVSLYAGAPLSEKMYPLIYPGKSGVLSASLCM 399 (625)
Q Consensus 320 ~vV~AAGN~g~~~~~~~~~~~~vitVga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~ 399 (625)
+||+||||+|.....+|+..+++|+|||++.
T Consensus 254 ~vV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~------------------------------------------------- 284 (395)
T 2z2z_A 254 VIVAASGNEGAPSPSYPAAYPEVIAVGAIDS------------------------------------------------- 284 (395)
T ss_dssp EEEEECCSSCCSSCCBTTTSTTEEEEEEECT-------------------------------------------------
T ss_pred EEEEECCCCCCCCCCCccCCCCEEEEEEecC-------------------------------------------------
Confidence 9999999999887788999999999998432
Q ss_pred CCCCCCCccCceEEEEecCCCchhhHHHHHHHcCceEEEEEeCCCCCCccccCCCccCEEEeChhhHHHHHHHHHcCCCC
Q 006930 400 ENSLDPNLVRGKIVICDRGSSPRVAKGLVVKKAGGVGMILANGISNGEGLVGDAHLLPACALGSDEGDAVKAYISSTANP 479 (625)
Q Consensus 400 ~~~~~~~~~~g~i~~~~~g~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~ 479 (625)
T Consensus 285 -------------------------------------------------------------------------------- 284 (395)
T 2z2z_A 285 -------------------------------------------------------------------------------- 284 (395)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eEEEEecceeecCcCCCcccccCCCCCCCCCCCCCCCccccCCCcEEeeecCCCCCCCCCCCcccccccccCchhhhHHH
Q 006930 480 TATIDFKGTILGIKPAPVVASFSARGPNGLNPEILKPDLIAPGVNILAAWTEAVGPTGLDSDLRKTEFNILSGTSMACPH 559 (625)
Q Consensus 480 ~~~~~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPdi~APG~~i~s~~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~ 559 (625)
.+.+++||++|| +|+|||.+|+++++.+ .|..++||||||||
T Consensus 285 ---------------~~~~a~fS~~G~----------~v~APG~~i~s~~~~~-------------~y~~~sGTS~AaP~ 326 (395)
T 2z2z_A 285 ---------------NDNIASFSNRQP----------EVSAPGVDILSTYPDD-------------SYETLMGTAMATPH 326 (395)
T ss_dssp ---------------TSCBCTTSCSSC----------SEEEECSSEEEEETTT-------------EEEEEESHHHHHHH
T ss_pred ---------------CCCCCcccCCCC----------CEEeCCCCeeeecCCC-------------ceEecCCHHHHHHH
Confidence 236789999997 6799999999998875 89999999999999
Q ss_pred HHHHHHHHHHhCC-------------CCCHHHHHHHHHhccccccCCCCCCccCCCCCCCCCCcccccccCccccCC
Q 006930 560 VSGAAALLKSAHP-------------DWSPAAIRSAMMTTASIVDNSNQPMTDEATGNASTPYDFGAGHVNLDRAMD 623 (625)
Q Consensus 560 VAG~aALl~~~~p-------------~lt~~~vk~~L~~tA~~~~~~~~~~~~~~~~~~~~~~~~G~G~ld~~~Al~ 623 (625)
|||++|||+|++| .|++.+||++|++||+++... ..+..||||+||+++||+
T Consensus 327 VaG~aAll~~~~p~~~~~~~~~~~~~~ls~~~v~~~L~~tA~~~~~~------------g~~~~~G~G~vd~~~A~~ 391 (395)
T 2z2z_A 327 VSGVVALIQAAYYQKYGKILPVGTFDDISKNTVRGILHITADDLGPT------------GWDADYGYGVVRAALAVQ 391 (395)
T ss_dssp HHHHHHHHHHHHHHHHSSCCCCCCTTCCSSSSHHHHHHHHSBCCSSS------------SSBTTTBTCBCCHHHHHH
T ss_pred HHHHHHHHHHhCccccccccccccccCCCHHHHHHHHHhhccccCCC------------CCCCCccCceeCHHHHHH
Confidence 9999999999999 999999999999999987532 245689999999999875
No 6
>3t41_A Epidermin leader peptide processing serine protea; structural genomics, center for structural genomics of infec diseases, csgid; 1.95A {Staphylococcus aureus} PDB: 3qfh_A
Probab=100.00 E-value=1.4e-57 Score=495.57 Aligned_cols=355 Identities=19% Similarity=0.249 Sum_probs=276.8
Q ss_pred CcceEEEEeCCCCCCCCcchhhhhhhhhcCC-CceEEEEeccceeeEEEEeCHHHHHHHhC-CCCeeEEEeccccccccC
Q 006930 34 TVKTFIFRIDSQSKPSIFPTHYHWYSSEFAS-PVQILHTYDTVFHGFSATLSPDQAASLSR-HPSVLAVIEDQRRQLHTT 111 (625)
Q Consensus 34 ~~~~yiV~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~L~~-~p~V~~v~~~~~~~~~~~ 111 (625)
..+.|||++++... +.+++++ +.++++.|. .+++|.++++++++++|++ +|.|++|+++..+++...
T Consensus 43 ~~~~yiv~~~~~~~----------~~~~~~~~g~~v~~~~~-~~~~~~~~~~~~~~~~L~~~~p~V~~v~~~~~~~~~~~ 111 (471)
T 3t41_A 43 EELYYSVEYKNTAT----------FNKLVKKKSLNVVYNIP-ELHVAQIKMTKMHANALANYKNDIKYINATCSTCITSE 111 (471)
T ss_dssp CCEEEEEEESCHHH----------HHHHHHHHTCEEEEEEG-GGTEEEEEECHHHHHHHHTCTTTEEEEEECCSSCBCCC
T ss_pred CceEEEEEcCCHHH----------HHHHHHhCCCEEEEecC-CccEEEEEeCHHHHHHHHhcCCCCcEEEecceeccccc
Confidence 35689998877541 2333333 788888986 5999999999999999999 999999999988877543
Q ss_pred CC----------ccccccccc---CCCccCCCCCCccEEEEcccccCCCCCCCCCCCCCCCCCCccccccccccccccCC
Q 006930 112 RS----------PQFLGLRNQ---QGLWSESDYGSDVIIGVFDTGIWPERRSFSDLNIGSIPSKWKGVCQVGVKFTAKNC 178 (625)
Q Consensus 112 ~~----------~~~~~~~~~---~~~~~~~~tG~gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~g~~~~~~~~ 178 (625)
.. ...|++.++ ..+|..+.+|+||+|||||||||++||+|.++...
T Consensus 112 ~~~~~~~~~~~~~~~w~l~~i~~~~~~~~~~~~G~gv~VaViDtGid~~Hp~~~~~~~~--------------------- 170 (471)
T 3t41_A 112 KTIDRTSNESLFSRQWDMNKITNNGASYDDLPKHANTKIAIIDTGVMKNHDDLKNNFST--------------------- 170 (471)
T ss_dssp CCCCC---CCSCCCCHHHHTTTTTTGGGGGCCSSCCCCEEEEESCCCTTCTTTTTTBCT---------------------
T ss_pred cccccCCCCccccccccHhhccCcHHHHhccCCCCCcEEEEEeCCCCCCChhHhcCccc---------------------
Confidence 21 123555443 35899999999999999999999999999863211
Q ss_pred CcceeeeeeecccccccCCCCCCCCCCCCCccccCCCCCCCCCccccchhhccccCCCCCcccccCccccccCCccceee
Q 006930 179 NKKIIGARFFSKGHEAAGGSAGPIGGGINETVEFMSPRDADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKARLAV 258 (625)
Q Consensus 179 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GvAP~A~l~~ 258 (625)
+.+.|+.+..+.... .....+...+.|..||||||||||+|++. +.||||+|+|+.
T Consensus 171 -----~~~~~~~~~~~~~~~-------~~~~~~~~~~~d~~gHGT~vAgiiaa~g~------------~~GvAp~a~l~~ 226 (471)
T 3t41_A 171 -----DSKNLVPLNGFRGTE-------PEETGDVHDVNDRKGHGTMVSGQTSANGK------------LIGVAPNNKFTM 226 (471)
T ss_dssp -----TCEECCCTTCGGGCC-------TTCCCCTTCCCCSSSHHHHHHHHHHCBSS------------SBCSSTTSCEEE
T ss_pred -----CCcccccCCCccCCC-------cccCCCCCCCcCCCCccchhhheeecCCc------------eeEECCCCeEEE
Confidence 111222211111110 01111223567899999999999998642 379999999999
Q ss_pred eeeccCCCCCChhhHHHHHHHHHHcCCCEEEeccCCCCCCCCC------------CCCChHHhhHHHhhhCCcEEEEecC
Q 006930 259 YKVCWKNAGCFDSDILAAFDAAVNDGVDVISISIGGGDGISSP------------YYLDPIAIGSYGAASRGVFVSSSAG 326 (625)
Q Consensus 259 ~kv~~~~~~~~~~~i~~ai~~a~~~~~~VIn~S~G~~~g~~~~------------~~~~~~~~~~~~a~~~Gi~vV~AAG 326 (625)
+|++++ +.+..+++++||+|+++++++|||||||... ... ...+.+..++.++.++|++||+|||
T Consensus 227 ~kv~~~-~~~~~~~i~~ai~~a~~~g~~Vin~S~G~~~--~~~~~~~~~~~~~~~~~~~~~~~ai~~a~~~Gi~vV~AAG 303 (471)
T 3t41_A 227 YRVFGS-KKTELLWVSKAIVQAANDGNQVINISVGSYI--ILDKNDHQTFRKDEKVEYDALQKAINYAKKKKSIVVAAAG 303 (471)
T ss_dssp EECCSS-SCCCHHHHHHHHHHHHHTTCSEEEECCCEEE--EECTTCCCSEESSCHHHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred EEeccC-CCCcHHHHHHHHHHHHhCCCCEEEeCCCCCC--CCccccccccccccchhHHHHHHHHHHHHhCCCEEEEEcC
Confidence 999988 6788889999999999999999999999741 000 1234577778888899999999999
Q ss_pred CCCCCCC------------------cccCCCCceEEeecCCCCCceeeEEEeCCCeeeeeeecccCCCCCCceeeEEecC
Q 006930 327 NDGPNGM------------------SVTNLAPWIVTVGAGTIDRNFPAEVRLGDGRRLSGVSLYAGAPLSEKMYPLIYPG 388 (625)
Q Consensus 327 N~g~~~~------------------~~~~~~~~vitVga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (625)
|+|.+.. ..|+..+++|+|||++.
T Consensus 304 N~g~~~~~~~~~~~~~~~~~~~~~~~~Pa~~~~vitVgA~~~-------------------------------------- 345 (471)
T 3t41_A 304 NDGIDVNDKQKLKLQREYQGNGEVKDVPASMDNVVTVGSTDQ-------------------------------------- 345 (471)
T ss_dssp SSCCBTTCHHHHHHTTTCCSSSEEEEETTTSTTEEEEEEECT--------------------------------------
T ss_pred CCCcCCCcccccccccccccCCceeeccccCCCeEEEEeeCC--------------------------------------
Confidence 9998654 26678889999998432
Q ss_pred CCCCcccccccCCCCCCCccCceEEEEecCCCchhhHHHHHHHcCceEEEEEeCCCCCCccccCCCccCEEEeChhhHHH
Q 006930 389 KSGVLSASLCMENSLDPNLVRGKIVICDRGSSPRVAKGLVVKKAGGVGMILANGISNGEGLVGDAHLLPACALGSDEGDA 468 (625)
Q Consensus 389 ~~~~~~~~~c~~~~~~~~~~~g~i~~~~~g~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~p~~~i~~~~~~~ 468 (625)
T Consensus 346 -------------------------------------------------------------------------------- 345 (471)
T 3t41_A 346 -------------------------------------------------------------------------------- 345 (471)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHcCCCCeEEEEecceeecCcCCCcccccCCCCCCCCCCCCCCCccccCCCc----------------------EE
Q 006930 469 VKAYISSTANPTATIDFKGTILGIKPAPVVASFSARGPNGLNPEILKPDLIAPGVN----------------------IL 526 (625)
Q Consensus 469 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPdi~APG~~----------------------i~ 526 (625)
.+.+++||++||+. |||+|||++ |+
T Consensus 346 --------------------------~~~~a~fS~~G~~~-------~di~APG~~i~~~~~~g~~~~~~~~~~~~~~i~ 392 (471)
T 3t41_A 346 --------------------------KSNLSEFSNFGMNY-------TDIAAPGGSFAYLNQFGVDKWMNEGYMHKENIL 392 (471)
T ss_dssp --------------------------TSSBCTTCCBCTTT-------CCEEEECCCCHHHHHHHHHHHHHTTTHHHHSEE
T ss_pred --------------------------CCCCCCccCCCCCC-------CeEEecCCCcccccccccccccccccccCceeE
Confidence 23679999999974 499999987 88
Q ss_pred eeecCCCCCCCCCCCcccccccccCchhhhHHHHHHHHHHHHHhCC-CCCHHHHHHHHHhccccccCCCCCCccCCCCCC
Q 006930 527 AAWTEAVGPTGLDSDLRKTEFNILSGTSMACPHVSGAAALLKSAHP-DWSPAAIRSAMMTTASIVDNSNQPMTDEATGNA 605 (625)
Q Consensus 527 s~~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~p-~lt~~~vk~~L~~tA~~~~~~~~~~~~~~~~~~ 605 (625)
++.+.+ .|..++|||||||+|||++|||+|++| .++|++||++|++||++...
T Consensus 393 s~~~~~-------------~~~~~sGTS~AaP~VAG~aAll~~~~p~~~~~~~v~~~L~~tA~~~~~------------- 446 (471)
T 3t41_A 393 TTANNG-------------RYIYQAGTALATPKVSGALALIIDKYHLEKHPDKAIELLYQHGTSKNN------------- 446 (471)
T ss_dssp EECTTS-------------SEEEECSHHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHSBCCSC-------------
T ss_pred ecCCCC-------------CEEeecchHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhCCCCCC-------------
Confidence 888765 799999999999999999999999999 89999999999999997642
Q ss_pred CCCCcccccccCccccCCC
Q 006930 606 STPYDFGAGHVNLDRAMDP 624 (625)
Q Consensus 606 ~~~~~~G~G~ld~~~Al~~ 624 (625)
.++..||||+||+.+||+.
T Consensus 447 ~~~~~~G~G~vd~~~Al~~ 465 (471)
T 3t41_A 447 KPFSRYGHGELDVYKALNV 465 (471)
T ss_dssp CCHHHHTTCBBCHHHHTTT
T ss_pred CCcCccccChhCHHHHHHH
Confidence 3556999999999999863
No 7
>2p4e_P Proprotein convertase subtilisin/kexin type 9; protease, LDL receptor, LDL, endocytosis, hydrol; 1.98A {Homo sapiens}
Probab=100.00 E-value=7.3e-60 Score=517.94 Aligned_cols=364 Identities=22% Similarity=0.225 Sum_probs=60.3
Q ss_pred cceEEEEeCCCCCCCCcchhhhhhhhhcCC---CceEEEEeccceeeEEEEeCHHHHHHHhCCCCeeEEEeccccccccC
Q 006930 35 VKTFIFRIDSQSKPSIFPTHYHWYSSEFAS---PVQILHTYDTVFHGFSATLSPDQAASLSRHPSVLAVIEDQRRQLHTT 111 (625)
Q Consensus 35 ~~~yiV~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~p~V~~v~~~~~~~~~~~ 111 (625)
+++|||+||++...+....+.+.+...+.+ ..++++.|+..|+||+++++++++++|+++|+|++|+++..++.+.
T Consensus 75 pg~YIV~lk~~~~~~~~~~~~~~l~a~~~~~g~~~~v~~~y~~~~~Gfsv~l~~~~l~~L~~~P~V~~Vepd~~v~~~~- 153 (692)
T 2p4e_P 75 PGTYVVVLKEETHLSQSERTARRLQAQAARRGYLTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEEDSSVFAQS- 153 (692)
T ss_dssp EEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTCCCEEEEEECSSSCEEEEECCGGGHHHHHTSTTEEEEEEEEEEEEC--
T ss_pred CCcEEEEECCCCCHHHHHHHHHHHHHHHhhcccccceeeEeeccccEEEEEeCHHHHHHHHcCCCceEEEeccccccCC-
Confidence 459999999998765554454545443322 4689999999999999999999999999999999999999876421
Q ss_pred CCcccccccccC------CCccCCCCCCccEEEEcccccCCCCCCCCCCCCCCCCCCccccccccccccccCCCcceeee
Q 006930 112 RSPQFLGLRNQQ------GLWSESDYGSDVIIGVFDTGIWPERRSFSDLNIGSIPSKWKGVCQVGVKFTAKNCNKKIIGA 185 (625)
Q Consensus 112 ~~~~~~~~~~~~------~~~~~~~tG~gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~ 185 (625)
..|++.++. ..|..+.+|+||+|+|||||||++||+|.++.. | ..
T Consensus 154 ---~pWgL~~i~~~~~~~~~w~~~~~G~GV~VaVIDTGId~~HpdL~gr~~------~--------------------~~ 204 (692)
T 2p4e_P 154 ---IPWNLERITPPRYRADEYQPPDGGSLVEVYLLDTSIQSDHREIEGRVM------V--------------------TD 204 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ---CCcchhhcccccccccccccCCCCCCcEEEEEcCCCCCCChhhcCceE------e--------------------cc
Confidence 235555432 367788899999999999999999999985410 0 00
Q ss_pred eeecccccccCCCCCCCCCCCCCccccCCCCCCCCCccccchhhccccCCCCCcccccCccccccCCccceeeeeeccCC
Q 006930 186 RFFSKGHEAAGGSAGPIGGGINETVEFMSPRDADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKARLAVYKVCWKN 265 (625)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~ 265 (625)
+++... .++. .....+.|.+||||||||||+|+. .||||+|+|+.+|+++++
T Consensus 205 ~~~~~d---~dg~-----------~~~~~~~D~~GHGTHVAGiIAg~~--------------~GVAP~A~L~~vKVl~~~ 256 (692)
T 2p4e_P 205 FENVPE---EDGT-----------RFHRQASKCDSHGTHLAGVVSGRD--------------AGVAKGASMRSLRVLNCQ 256 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccC---CCCC-----------cccCCCCCCCCcHHHhhhHhhcCC--------------CccCCCCEEEEEEeecCC
Confidence 000000 0000 001245689999999999999873 699999999999999986
Q ss_pred CCCChhhHHHHHHHHHHc------CCCEEEeccCCCCCCCCCCCCChHHhhHHHhhhCCcEEEEecCCCCCCCCc-ccCC
Q 006930 266 AGCFDSDILAAFDAAVND------GVDVISISIGGGDGISSPYYLDPIAIGSYGAASRGVFVSSSAGNDGPNGMS-VTNL 338 (625)
Q Consensus 266 ~~~~~~~i~~ai~~a~~~------~~~VIn~S~G~~~g~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~g~~~~~-~~~~ 338 (625)
+.++.+++++||+|++++ +++|||||||+. . ...+..++.++.++|++||+||||+|.+... +|+.
T Consensus 257 G~g~~s~ii~aI~~a~~~~~~~~~g~~VINmSlGg~---~----s~~l~~Ai~~A~~~GVlvVaAAGN~G~~~~~~sPA~ 329 (692)
T 2p4e_P 257 GKGTVSGTLIGLEFIRKSQLVQPVGPLVVLLPLAGG---Y----SRVLNAACQRLARAGVVLVTAAGNFRDDACLYSPAS 329 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCHHHHHHHHHHHHhhhhcccCCceEEEecCCCC---C----cHHHHHHHHHHHHCCCEEEEECCCCCCCCCccCccc
Confidence 768889999999999986 899999999976 2 3455666678889999999999999987653 4788
Q ss_pred CCceEEeecCCCCCceeeEEEeCCCeeeeeeecccCCCCCCceeeEEecCCCCCcccccccCCCCCCCccCceEEEEecC
Q 006930 339 APWIVTVGAGTIDRNFPAEVRLGDGRRLSGVSLYAGAPLSEKMYPLIYPGKSGVLSASLCMENSLDPNLVRGKIVICDRG 418 (625)
Q Consensus 339 ~~~vitVga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~i~~~~~g 418 (625)
.+++|+|||++.+...
T Consensus 330 ~~~vItVGA~d~~~~~---------------------------------------------------------------- 345 (692)
T 2p4e_P 330 APEVITVGATNAQDQP---------------------------------------------------------------- 345 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCEEEEEEEcCCCCc----------------------------------------------------------------
Confidence 8999999995432110
Q ss_pred CCchhhHHHHHHHcCceEEEEEeCCCCCCccccCCCccCEEEeChhhHHHHHHHHHcCCCCeEEEEecceeecCcCCCcc
Q 006930 419 SSPRVAKGLVVKKAGGVGMILANGISNGEGLVGDAHLLPACALGSDEGDAVKAYISSTANPTATIDFKGTILGIKPAPVV 498 (625)
Q Consensus 419 ~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 498 (625)
...-
T Consensus 346 ----------------------------------------------------------------------------a~~s 349 (692)
T 2p4e_P 346 ----------------------------------------------------------------------------VTLG 349 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ----------------------------------------------------------------------------cccc
Confidence 0001
Q ss_pred cccCCCCCCCCCCCCCCCccccCCCcEEeeecCCCCCCCCCCCcccccccccCchhhhHHHHHHHHHHHHHhCCCCCHHH
Q 006930 499 ASFSARGPNGLNPEILKPDLIAPGVNILAAWTEAVGPTGLDSDLRKTEFNILSGTSMACPHVSGAAALLKSAHPDWSPAA 578 (625)
Q Consensus 499 a~fSs~Gp~~~~~~~~KPdi~APG~~i~s~~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~p~lt~~~ 578 (625)
+.||+||+. |||+|||++|+++++.... .|..++|||||||||||++|||+|++|+|+|+|
T Consensus 350 s~fSn~G~~--------vDI~APG~~I~St~~~~~~-----------~y~~~SGTSmAAPhVAG~aALlls~~P~ltp~q 410 (692)
T 2p4e_P 350 TLGTNFGRC--------VDLFAPGEDIIGASSDCST-----------CFVSQSGTSQAAAHVAGIAAMMLSAEPELTLAE 410 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccCCCCCc--------eeEEecCCcEEeeccCCCC-----------ceEeccchHHHHHHHHHHHHHHHHHCCCCCHHH
Confidence 238999985 4999999999999876422 789999999999999999999999999999999
Q ss_pred HHHHHHhccccccCCCCCCc--------cCCCCCCCCCCcccccc--cCccccC
Q 006930 579 IRSAMMTTASIVDNSNQPMT--------DEATGNASTPYDFGAGH--VNLDRAM 622 (625)
Q Consensus 579 vk~~L~~tA~~~~~~~~~~~--------~~~~~~~~~~~~~G~G~--ld~~~Al 622 (625)
||++|++||.+..-...... +.-.........+|+|+ .++..+.
T Consensus 411 Vk~~L~~tA~~~~~~~~~~p~~~~~~tpN~l~~~~~~~~~~G~~l~~~~~w~~~ 464 (692)
T 2p4e_P 411 LRQRLIHFSAKDVINEAWFPEDQRVLTPNLVAALPPSTHGAGWQLFCRTVWSAH 464 (692)
T ss_dssp ------------------------------------------------------
T ss_pred HHHHHHHhccccccCCCCCccccCCCCcceeecCCCccccCCCCcccccccccc
Confidence 99999999976532211000 00001111345688888 7766653
No 8
>1r6v_A Subtilisin-like serine protease; sandwich domain, propeptide, hydrolase; 1.70A {Fervidobacterium pennivorans} SCOP: c.41.1.1
Probab=100.00 E-value=7e-56 Score=489.94 Aligned_cols=365 Identities=24% Similarity=0.249 Sum_probs=267.9
Q ss_pred CCCCcceEEEEeCCCCCCCCcchhhhhhhhhcCCCceEEEEeccceeeEEEEeCH----HHHHHHh--CCCCeeEEEecc
Q 006930 31 TDQTVKTFIFRIDSQSKPSIFPTHYHWYSSEFASPVQILHTYDTVFHGFSATLSP----DQAASLS--RHPSVLAVIEDQ 104 (625)
Q Consensus 31 ~~~~~~~yiV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~l~~L~--~~p~V~~v~~~~ 104 (625)
++..+++|||+||+... ..+.++. + +.++.+.+. .+++++++++. +.+++|+ ++|+|++|||+.
T Consensus 27 ~~~~~~~~IV~~k~~~~------~~~~~~~-~--g~~v~~~~~-~i~~~~~~~~~~~~~~~~~~l~~~~~~~V~~vepd~ 96 (671)
T 1r6v_A 27 GEYTEGKILVGYNDRSE------VDKIVKA-V--NGKVVLELP-QIKVVSIKLNGMTVKQAYDKIKALALKGIRYVEPSY 96 (671)
T ss_dssp TSBCTTEEEEEESSHHH------HHHHHHH-H--TCEEEEEEG-GGTEEEEECSSCCHHHHHHHHTTSCCSSEEEEECCB
T ss_pred CccCCccEEEEECCCcC------HHHHHHh-c--CCeEEEEcC-CCcEEEEEeCCcCHHHHHHHHHhccCCCceEEecCe
Confidence 34468999999998532 1122221 1 568888887 68899998864 3456776 489999999998
Q ss_pred ccccccC---C------------------------Cccccccccc--CCC-ccCCCCCCccEEEEcccccCCCCCCCCCC
Q 006930 105 RRQLHTT---R------------------------SPQFLGLRNQ--QGL-WSESDYGSDVIIGVFDTGIWPERRSFSDL 154 (625)
Q Consensus 105 ~~~~~~~---~------------------------~~~~~~~~~~--~~~-~~~~~tG~gv~VaVIDtGid~~Hp~f~~~ 154 (625)
.+++... . ....|++..+ +.+ |+. .+|+||+|||||||||++||+|.++
T Consensus 97 ~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~l~~I~~~~a~w~~-~tG~gV~VAVIDTGVd~~HpdL~~~ 175 (671)
T 1r6v_A 97 KRELIKPTVVKPNPDMYKIRKPGLNSTARDYGEELSNELWGLEAIGVTQQLWEE-ASGTNIIVAVVDTGVDGTHPDLEGQ 175 (671)
T ss_dssp CCEECCCEECCCCTTTTCSSSSCCSSSTTCCSSTTGGGCHHHHHTTCCHHHHHH-CSCTTCEEEEEESCCBTTSGGGTTT
T ss_pred EEEeccccccCcccccccccccccccccccccccccccCCchhccCCchhhhhc-cCCCCCEEEEEeCCCCCCCcccccc
Confidence 7654210 0 0123444333 445 887 8999999999999999999999753
Q ss_pred CCCCCCCCccccccccccccccCCCcceeeeeeecccccccCCCCCCCCCCCCCccccCCCCCCCCCccccchhhccccC
Q 006930 155 NIGSIPSKWKGVCQVGVKFTAKNCNKKIIGARFFSKGHEAAGGSAGPIGGGINETVEFMSPRDADGHGTHTASTAAGRHA 234 (625)
Q Consensus 155 ~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~ 234 (625)
- +..+++..+.... ...+..|.+||||||||||||..
T Consensus 176 ~---------------------------~~g~~~~~~~~~p---------------~~~d~~d~~gHGThVAGiIAa~~- 212 (671)
T 1r6v_A 176 V---------------------------IAGYRPAFDEELP---------------AGTDSSYGGSAGTHVAGTIAAKK- 212 (671)
T ss_dssp B---------------------------CCEEEGGGTEEEC---------------TTCBCCTTCSHHHHHHHHHHCCC-
T ss_pred E---------------------------EecccccCCCcCC---------------CCCCCccCCCcchhhhhhhhccC-
Confidence 1 1111111100000 01223467899999999999974
Q ss_pred CCCCcccccCccccccCCccceeeeeeccCC----CC--CChhhHHHHHHHHHHcCCCEEEeccCCCCCCCCCCCCChHH
Q 006930 235 FRASMEGYAAGVAKGVAPKARLAVYKVCWKN----AG--CFDSDILAAFDAAVNDGVDVISISIGGGDGISSPYYLDPIA 308 (625)
Q Consensus 235 ~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~----~~--~~~~~i~~ai~~a~~~~~~VIn~S~G~~~g~~~~~~~~~~~ 308 (625)
++. | +.||||+|+|+.+|+++.. +. .....+++||+||++++++|||||||... +...+.
T Consensus 213 ng~---g-----v~GVAP~A~I~~vkv~~~~~~~~g~g~~s~~~i~~ai~~A~~~gadVIN~SlG~~~------~s~~l~ 278 (671)
T 1r6v_A 213 DGK---G-----IVGVAPGAKIMPIVIFDDPALVGGNGYVGDDYVAAGIIWATDHGAKVMNHSWGGWG------YSYTMK 278 (671)
T ss_dssp SSS---S-----CCCSCTTSEEEEEESBCCHHHHCTTSBCCHHHHHHHHHHHHHTTCSEEEECEEBSC------CCHHHH
T ss_pred CCC---c-----eEEECCCCEEEEEEeccCccccCCCCccCHHHHHHHHHHHHHcCCCEEEeCCCCCC------CCHHHH
Confidence 222 2 3899999999999999761 12 33456899999999999999999999862 345678
Q ss_pred hhHHHhhhCCcEEEEecCCCCCCC-CcccCCCCceEEeecCCCCCceeeEEEeCCCeeeeeeecccCCCCCCceeeEEec
Q 006930 309 IGSYGAASRGVFVSSSAGNDGPNG-MSVTNLAPWIVTVGAGTIDRNFPAEVRLGDGRRLSGVSLYAGAPLSEKMYPLIYP 387 (625)
Q Consensus 309 ~~~~~a~~~Gi~vV~AAGN~g~~~-~~~~~~~~~vitVga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (625)
.++.++.++|++||+||||+|.+. ..+|+..+++|+|||++.+..
T Consensus 279 ~Ai~~A~~~GvlvVaAAGN~g~~~~~~yPA~~~~VItVgA~d~~g~---------------------------------- 324 (671)
T 1r6v_A 279 EAFDYAMEHGVVMVVSAGNNTSDSHHQYPAGYPGVIQVAALDYYGG---------------------------------- 324 (671)
T ss_dssp HHHHHHHHTTCEEEEECCSCSSSCCCCBTTTSTTCEEEEEEEEETT----------------------------------
T ss_pred HHHHHHHhCCCEEEEeCCCCCCCCCccCcccCCCeEEEEEEcCCCC----------------------------------
Confidence 888899999999999999999875 567888999999998432110
Q ss_pred CCCCCcccccccCCCCCCCccCceEEEEecCCCchhhHHHHHHHcCceEEEEEeCCCCCCccccCCCccCEEEeChhhHH
Q 006930 388 GKSGVLSASLCMENSLDPNLVRGKIVICDRGSSPRVAKGLVVKKAGGVGMILANGISNGEGLVGDAHLLPACALGSDEGD 467 (625)
Q Consensus 388 ~~~~~~~~~~c~~~~~~~~~~~g~i~~~~~g~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~p~~~i~~~~~~ 467 (625)
T Consensus 325 -------------------------------------------------------------------------------- 324 (671)
T 1r6v_A 325 -------------------------------------------------------------------------------- 324 (671)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHcCCCCeEEEEecceeecCcCCCcccccCCCCCCCCCCCCCCCccccCCCcEEeeecCCCCCCC-----CCCCc
Q 006930 468 AVKAYISSTANPTATIDFKGTILGIKPAPVVASFSARGPNGLNPEILKPDLIAPGVNILAAWTEAVGPTG-----LDSDL 542 (625)
Q Consensus 468 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPdi~APG~~i~s~~~~~~~~~~-----~~~~~ 542 (625)
...+++|||+||.. ||+|||++|+++.+....... .....
T Consensus 325 ---------------------------~~~~a~fSn~G~~v--------dv~APG~~I~St~p~~~~~g~~~~~~~~~~~ 369 (671)
T 1r6v_A 325 ---------------------------TFRVAGFSSRSDGV--------SVGAPGVTILSTVPGEDSIGYEGHNENVPAT 369 (671)
T ss_dssp ---------------------------EEEECSSSCCCTTE--------EEEEECSSEEEECCCTTSTTCCCCCTTCCCS
T ss_pred ---------------------------ceeeccccCCCCCe--------eEEecCCCEEeecCCCCcccccccccccccc
Confidence 01478999999976 999999999999876422110 00111
Q ss_pred ccccccccCchhhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHhccccccCCCCCCccCCCCCCCCCCcccccccCccccC
Q 006930 543 RKTEFNILSGTSMACPHVSGAAALLKSAHPDWSPAAIRSAMMTTASIVDNSNQPMTDEATGNASTPYDFGAGHVNLDRAM 622 (625)
Q Consensus 543 ~~~~y~~~sGTSmAaP~VAG~aALl~~~~p~lt~~~vk~~L~~tA~~~~~~~~~~~~~~~~~~~~~~~~G~G~ld~~~Al 622 (625)
....|..++|||||||||||++|||+|++|+++++|||++|++||+++... ..+..||||+||+.+||
T Consensus 370 ~~~~y~~~sGTSmAAP~VAGvaALl~s~~P~lt~~~Vr~~L~~TA~~~~~~------------g~d~~~G~G~vna~~Al 437 (671)
T 1r6v_A 370 NGGTYDYYQGTSMAAPHVTGVVAVLLQKFPNAKPWQIRKLLENTAFDFNGN------------GWDHDTGYGLVKLDAAL 437 (671)
T ss_dssp SSCCEEEEESHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCSSSS------------SCBTTTBTCBCCHHHHH
T ss_pred CCCceEEecCccHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhCcCCCCC------------CCCCCcccceeCHHHHh
Confidence 233789999999999999999999999999999999999999999987532 23458999999999998
Q ss_pred CC
Q 006930 623 DP 624 (625)
Q Consensus 623 ~~ 624 (625)
+.
T Consensus 438 ~~ 439 (671)
T 1r6v_A 438 QG 439 (671)
T ss_dssp HC
T ss_pred hh
Confidence 63
No 9
>1dbi_A AK.1 serine protease; hydrolase; 1.80A {Bacillus SP} SCOP: c.41.1.1
Probab=100.00 E-value=8.7e-54 Score=432.34 Aligned_cols=266 Identities=31% Similarity=0.385 Sum_probs=217.0
Q ss_pred ccccccc--CCCccCCCCCCccEEEEcccccCCCCCCCCCCCCCCCCCCccccccccccccccCCCcceeeeeeeccccc
Q 006930 116 FLGLRNQ--QGLWSESDYGSDVIIGVFDTGIWPERRSFSDLNIGSIPSKWKGVCQVGVKFTAKNCNKKIIGARFFSKGHE 193 (625)
Q Consensus 116 ~~~~~~~--~~~~~~~~tG~gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~ 193 (625)
+|++..+ +.+|+.+.+|+||+|+|||||||++||+|.+ +++..++|..
T Consensus 12 ~w~l~~i~~~~aw~~~~g~~gv~VaViDtGvd~~hp~l~~---------------------------~~~~~~~~~~--- 61 (280)
T 1dbi_A 12 QYGPQNTYTDYAWDVTKGSSGQEIAVIDTGVDYTHPDLDG---------------------------KVIKGYDFVD--- 61 (280)
T ss_dssp CCTTGGGTHHHHTTTCCCCTTCEEEEEESCCCTTSTTTTT---------------------------TEEEEEETTT---
T ss_pred CCChhhcCcHHHHhhcCCCCCCEEEEEeCCcCCCChhhcc---------------------------CcccceeccC---
Confidence 4555544 5689999888899999999999999999974 2333444433
Q ss_pred ccCCCCCCCCCCCCCccccCCCCCCCCCccccchhhccccCCCCCcccccCccccccCCccceeeeeeccCCCCCChhhH
Q 006930 194 AAGGSAGPIGGGINETVEFMSPRDADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKARLAVYKVCWKNAGCFDSDI 273 (625)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~~~~~~~~i 273 (625)
.. .++.|..+|||||||||+|..++..+ +.||||+|+|+.+|+++.++.+..+++
T Consensus 62 ---~~--------------~~~~d~~gHGT~vAgiia~~~~~~~g--------~~GvAp~a~l~~~kv~~~~g~~~~~~i 116 (280)
T 1dbi_A 62 ---ND--------------YDPMDLNNHGTHVAGIAAAETNNATG--------IAGMAPNTRILAVRALDRNGSGTLSDI 116 (280)
T ss_dssp ---TB--------------SCCCCSSSHHHHHHHHHHCCCSSSSS--------CCCSSSSCEEEEEECCCTTSCCCHHHH
T ss_pred ---CC--------------CCCCCCCCcHHHHHHHHhCcCCCCCc--------ceEeCCCCEEEEEEEECCCCCcCHHHH
Confidence 11 34568899999999999998755433 379999999999999988677888999
Q ss_pred HHHHHHHHHcCCCEEEeccCCCCCCCCCCCCChHHhhHHHhhhCCcEEEEecCCCCCCCCcccCCCCceEEeecCCCCCc
Q 006930 274 LAAFDAAVNDGVDVISISIGGGDGISSPYYLDPIAIGSYGAASRGVFVSSSAGNDGPNGMSVTNLAPWIVTVGAGTIDRN 353 (625)
Q Consensus 274 ~~ai~~a~~~~~~VIn~S~G~~~g~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~~~vitVga~~~~~~ 353 (625)
+++|+|+++++++|||||||... ....+..++.++.++|++||+||||+|.....+|+..+++|+||+++.
T Consensus 117 ~~ai~~a~~~g~~Vin~S~G~~~------~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~--- 187 (280)
T 1dbi_A 117 ADAIIYAADSGAEVINLSLGCDC------HTTTLENAVNYAWNKGSVVVAAAGNNGSSTTFEPASYENVIAVGAVDQ--- 187 (280)
T ss_dssp HHHHHHHHHTTCSEEEECCSSCC------CCHHHHHHHHHHHHTTCEEEEECCBC---------CCTTSEEEEEECT---
T ss_pred HHHHHHHHHCCCCEEEeCCCCCC------CCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccccCCeEEEEeeCC---
Confidence 99999999999999999999872 346678888889999999999999999887788889999999998432
Q ss_pred eeeEEEeCCCeeeeeeecccCCCCCCceeeEEecCCCCCcccccccCCCCCCCccCceEEEEecCCCchhhHHHHHHHcC
Q 006930 354 FPAEVRLGDGRRLSGVSLYAGAPLSEKMYPLIYPGKSGVLSASLCMENSLDPNLVRGKIVICDRGSSPRVAKGLVVKKAG 433 (625)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~i~~~~~g~~~~~~~~~~~~~~g 433 (625)
T Consensus 188 -------------------------------------------------------------------------------- 187 (280)
T 1dbi_A 188 -------------------------------------------------------------------------------- 187 (280)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceEEEEEeCCCCCCccccCCCccCEEEeChhhHHHHHHHHHcCCCCeEEEEecceeecCcCCCcccccCCCCCCCCCCCC
Q 006930 434 GVGMILANGISNGEGLVGDAHLLPACALGSDEGDAVKAYISSTANPTATIDFKGTILGIKPAPVVASFSARGPNGLNPEI 513 (625)
Q Consensus 434 ~~g~~~~~~~~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~ 513 (625)
.+.+++||++||..
T Consensus 188 -------------------------------------------------------------~~~~~~~S~~G~~~----- 201 (280)
T 1dbi_A 188 -------------------------------------------------------------YDRLASFSNYGTWV----- 201 (280)
T ss_dssp -------------------------------------------------------------TSCBCTTBCCSTTC-----
T ss_pred -------------------------------------------------------------CCCcCCCCCCCCCc-----
Confidence 13678999999865
Q ss_pred CCCccccCCCcEEeeecCCCCCCCCCCCcccccccccCchhhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHhccccccCC
Q 006930 514 LKPDLIAPGVNILAAWTEAVGPTGLDSDLRKTEFNILSGTSMACPHVSGAAALLKSAHPDWSPAAIRSAMMTTASIVDNS 593 (625)
Q Consensus 514 ~KPdi~APG~~i~s~~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~p~lt~~~vk~~L~~tA~~~~~~ 593 (625)
||+|||++|+++.+.+ .|..++|||||||+|||++|||++ |++++.|||++|++||+++...
T Consensus 202 ---dv~ApG~~i~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~--p~~t~~~v~~~L~~ta~~~~~~ 263 (280)
T 1dbi_A 202 ---DVVAPGVDIVSTITGN-------------RYAYMSGTSMASPHVAGLAALLAS--QGRNNIEIRQAIEQTADKISGT 263 (280)
T ss_dssp ---CEEEECSSEEEEETTT-------------EEEEECSHHHHHHHHHHHHHHHHH--TTCCHHHHHHHHHHTSBCCTTB
T ss_pred ---eEEEecCCeEeecCCC-------------CEEEccCHHHHHHHHHHHHHHHHC--CCCCHHHHHHHHHHhCccCCCC
Confidence 9999999999998765 899999999999999999999987 8999999999999999987521
Q ss_pred CCCCccCCCCCCCCCCcccccccCccccCC
Q 006930 594 NQPMTDEATGNASTPYDFGAGHVNLDRAMD 623 (625)
Q Consensus 594 ~~~~~~~~~~~~~~~~~~G~G~ld~~~Al~ 623 (625)
...||||+||+++||+
T Consensus 264 --------------~~~~G~G~vn~~~A~~ 279 (280)
T 1dbi_A 264 --------------GTYFKYGRINSYNAVT 279 (280)
T ss_dssp --------------TTTBSSEECCHHHHHT
T ss_pred --------------CCcccCCEECHHHHhc
Confidence 2479999999999986
No 10
>1gci_A Subtilisin; hydrolase, serine protease; 0.78A {Bacillus lentus} SCOP: c.41.1.1 PDB: 1jea_A 1ndq_A 1svn_A 1tk2_A* 3bx1_A 1ah2_A 1iav_A* 1c9m_A* 1wsd_A 1mpt_A 1ndu_A 1c9j_A 1q5p_A* 1st3_A 1c9n_A*
Probab=100.00 E-value=4.7e-54 Score=431.44 Aligned_cols=263 Identities=35% Similarity=0.488 Sum_probs=222.4
Q ss_pred ccccccc--CCCccCCCCCCccEEEEcccccCCCCCCCCCCCCCCCCCCccccccccccccccCCCcceeeeeeeccccc
Q 006930 116 FLGLRNQ--QGLWSESDYGSDVIIGVFDTGIWPERRSFSDLNIGSIPSKWKGVCQVGVKFTAKNCNKKIIGARFFSKGHE 193 (625)
Q Consensus 116 ~~~~~~~--~~~~~~~~tG~gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~ 193 (625)
.|++..+ +.+|+.+++|+||+|+|||||| .+||+|+ +...++|..
T Consensus 5 ~W~l~~i~~~~a~~~g~~G~gv~VaViDtGi-~~h~~l~-----------------------------~~~~~~~~~--- 51 (269)
T 1gci_A 5 PWGISRVQAPAAHNRGLTGSGVKVAVLDTGI-STHPDLN-----------------------------IRGGASFVP--- 51 (269)
T ss_dssp CHHHHHTTHHHHHHTTCSCTTCEEEEEESCC-CCCTTCC-----------------------------EEEEEECST---
T ss_pred CcChhhcCcHHHHhcCCCCCCCEEEEECCCC-CCCHhhc-----------------------------ccCCcccCC---
Confidence 3555443 5689999999999999999999 8999994 222333332
Q ss_pred ccCCCCCCCCCCCCCccccCCCCCCCCCccccchhhccccCCCCCcccccCccccccCCccceeeeeeccCCCCCChhhH
Q 006930 194 AAGGSAGPIGGGINETVEFMSPRDADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKARLAVYKVCWKNAGCFDSDI 273 (625)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~~~~~~~~i 273 (625)
+. ....|..+|||||||||+|.. +.. | +.||||+|+|+.+|+++.++.+..+++
T Consensus 52 ---~~--------------~~~~d~~gHGT~vAgiia~~~-~~~---~-----~~GvAp~a~l~~~~v~~~~g~~~~~~~ 105 (269)
T 1gci_A 52 ---GE--------------PSTQDGNGHGTHVAGTIAALN-NSI---G-----VLGVAPSAELYAVKVLGASGSGSVSSI 105 (269)
T ss_dssp ---TC--------------CSCSCSSSHHHHHHHHHHCCC-SSS---B-----CCCSSTTCEEEEEECBCTTSCBCHHHH
T ss_pred ---CC--------------CCCCCCCCChHHHHHHHhcCc-CCC---C-----cEEeCCCCEEEEEEeECCCCCcCHHHH
Confidence 11 235678999999999999973 221 2 379999999999999988667788899
Q ss_pred HHHHHHHHHcCCCEEEeccCCCCCCCCCCCCChHHhhHHHhhhCCcEEEEecCCCCCCCCcccCCCCceEEeecCCCCCc
Q 006930 274 LAAFDAAVNDGVDVISISIGGGDGISSPYYLDPIAIGSYGAASRGVFVSSSAGNDGPNGMSVTNLAPWIVTVGAGTIDRN 353 (625)
Q Consensus 274 ~~ai~~a~~~~~~VIn~S~G~~~g~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~~~vitVga~~~~~~ 353 (625)
+++|+|+++++++|||||||... ....+..++.++.++|++||+||||+|.....+|+..+++|+||+++.
T Consensus 106 ~~ai~~a~~~~~~Vin~S~G~~~------~~~~~~~ai~~a~~~gv~vV~AaGN~g~~~~~~Pa~~~~vi~Vga~~~--- 176 (269)
T 1gci_A 106 AQGLEWAGNNGMHVANLSLGSPS------PSATLEQAVNSATSRGVLVVAASGNSGAGSISYPARYANAMAVGATDQ--- 176 (269)
T ss_dssp HHHHHHHHHTTCSEEEECCCBSS------CCHHHHHHHHHHHHTTCEEEEECCSSCCSSCCBTTTSTTEEEEEEECT---
T ss_pred HHHHHHHHHCCCeEEEeCCCCCC------CCHHHHHHHHHHHHCCCEEEEecCCCCCCCCcCCccCCCeEEEEeecC---
Confidence 99999999999999999999873 245677888889999999999999999988888999999999998432
Q ss_pred eeeEEEeCCCeeeeeeecccCCCCCCceeeEEecCCCCCcccccccCCCCCCCccCceEEEEecCCCchhhHHHHHHHcC
Q 006930 354 FPAEVRLGDGRRLSGVSLYAGAPLSEKMYPLIYPGKSGVLSASLCMENSLDPNLVRGKIVICDRGSSPRVAKGLVVKKAG 433 (625)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~i~~~~~g~~~~~~~~~~~~~~g 433 (625)
T Consensus 177 -------------------------------------------------------------------------------- 176 (269)
T 1gci_A 177 -------------------------------------------------------------------------------- 176 (269)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceEEEEEeCCCCCCccccCCCccCEEEeChhhHHHHHHHHHcCCCCeEEEEecceeecCcCCCcccccCCCCCCCCCCCC
Q 006930 434 GVGMILANGISNGEGLVGDAHLLPACALGSDEGDAVKAYISSTANPTATIDFKGTILGIKPAPVVASFSARGPNGLNPEI 513 (625)
Q Consensus 434 ~~g~~~~~~~~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~ 513 (625)
.+.+++||++||..
T Consensus 177 -------------------------------------------------------------~~~~~~~S~~G~~~----- 190 (269)
T 1gci_A 177 -------------------------------------------------------------NNNRASFSQYGAGL----- 190 (269)
T ss_dssp -------------------------------------------------------------TSCBCTTCCCSTTE-----
T ss_pred -------------------------------------------------------------CCCCCCCCCCCCCc-----
Confidence 13678999999975
Q ss_pred CCCccccCCCcEEeeecCCCCCCCCCCCcccccccccCchhhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHhccccccCC
Q 006930 514 LKPDLIAPGVNILAAWTEAVGPTGLDSDLRKTEFNILSGTSMACPHVSGAAALLKSAHPDWSPAAIRSAMMTTASIVDNS 593 (625)
Q Consensus 514 ~KPdi~APG~~i~s~~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~p~lt~~~vk~~L~~tA~~~~~~ 593 (625)
||+|||.+|+++.+.+ .|..++|||||||+|||++|||+|++|+|+++|||++|++||+++.
T Consensus 191 ---di~APG~~i~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~p~~t~~~v~~~L~~tA~~~g-- 252 (269)
T 1gci_A 191 ---DIVAPGVNVQSTYPGS-------------TYASLNGTSMATPHVAGAAALVKQKNPSWSNVQIRNHLKNTATSLG-- 252 (269)
T ss_dssp ---EEEEECSSEEEEETTT-------------EEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHTSBCCS--
T ss_pred ---ceEecCCCeEeecCCC-------------CEEEcCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccCC--
Confidence 9999999999998765 7999999999999999999999999999999999999999999873
Q ss_pred CCCCccCCCCCCCCCCcccccccCccccCC
Q 006930 594 NQPMTDEATGNASTPYDFGAGHVNLDRAMD 623 (625)
Q Consensus 594 ~~~~~~~~~~~~~~~~~~G~G~ld~~~Al~ 623 (625)
++..||||+||+++||+
T Consensus 253 -------------~~~~~G~G~vn~~~A~~ 269 (269)
T 1gci_A 253 -------------STNLYGSGLVNAEAATR 269 (269)
T ss_dssp -------------CHHHHTTCBCCHHHHTC
T ss_pred -------------CCCCcccCccCHHHHcC
Confidence 23589999999999986
No 11
>1r0r_E Subtilisin carlsberg; high resolution, serine protease, protein inhibitor, hydrolase; 1.10A {Bacillus licheniformis} SCOP: c.41.1.1 PDB: 1af4_A* 1be8_A* 1bfk_A 1bfu_A 1be6_A 1oyv_A 1cse_E 1sbc_A 1sca_A 1scb_A 1scd_A 2sec_E 2wuv_A 2wuw_E 1yu6_A 1scn_E* 1c3l_A 1avt_A* 1av7_A* 1sel_A ...
Probab=100.00 E-value=3.6e-54 Score=434.04 Aligned_cols=263 Identities=32% Similarity=0.512 Sum_probs=220.1
Q ss_pred ccccc--cCCCccCCCCCCccEEEEcccccCCCCCCCCCCCCCCCCCCccccccccccccccCCCcceeeeeeecccccc
Q 006930 117 LGLRN--QQGLWSESDYGSDVIIGVFDTGIWPERRSFSDLNIGSIPSKWKGVCQVGVKFTAKNCNKKIIGARFFSKGHEA 194 (625)
Q Consensus 117 ~~~~~--~~~~~~~~~tG~gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~ 194 (625)
|++.. ++.+|+.+++|+||+|+|||||||++||+|+ +...++|..+
T Consensus 6 w~l~~i~~~~~~~~g~~G~gv~VaViDtGid~~h~~l~-----------------------------~~~g~~~~~~--- 53 (274)
T 1r0r_E 6 YGIPLIKADKVQAQGFKGANVKVAVLDTGIQASHPDLN-----------------------------VVGGASFVAG--- 53 (274)
T ss_dssp THHHHTTHHHHHHHTCSCTTCEEEEEESCCCTTCTTCC-----------------------------EEEEEECSTT---
T ss_pred CchhhcCCHHHHhcCCCCCCCEEEEEcCCCCCCCHhHc-----------------------------CCCCccccCC---
Confidence 55543 3568999999999999999999999999994 1223333321
Q ss_pred cCCCCCCCCCCCCCccccCCCCCCCCCccccchhhccccCCCCCcccccCccccccCCccceeeeeeccCCCCCChhhHH
Q 006930 195 AGGSAGPIGGGINETVEFMSPRDADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKARLAVYKVCWKNAGCFDSDIL 274 (625)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~~~~~~~~i~ 274 (625)
. ....|..+|||||||||+|.. ++. | +.||||+|+|+.+|+++.++.+..++++
T Consensus 54 ---~--------------~~~~d~~gHGT~vAgiia~~~-~~~---g-----~~GvAp~a~l~~~~v~~~~g~~~~~~i~ 107 (274)
T 1r0r_E 54 ---E--------------AYNTDGNGHGTHVAGTVAALD-NTT---G-----VLGVAPSVSLYAVKVLNSSGSGSYSGIV 107 (274)
T ss_dssp ---C--------------CTTCCSSSHHHHHHHHHHCCS-SSS---B-----CCCSSTTSEEEEEECSCTTSEECHHHHH
T ss_pred ---C--------------CCCCCCCCCHHHHHHHHHccC-CCC---c-----eEEECCCCEEEEEEEECCCCCccHHHHH
Confidence 1 224678999999999999973 221 2 3899999999999999886667888999
Q ss_pred HHHHHHHHcCCCEEEeccCCCCCCCCCCCCChHHhhHHHhhhCCcEEEEecCCCCCCC----CcccCCCCceEEeecCCC
Q 006930 275 AAFDAAVNDGVDVISISIGGGDGISSPYYLDPIAIGSYGAASRGVFVSSSAGNDGPNG----MSVTNLAPWIVTVGAGTI 350 (625)
Q Consensus 275 ~ai~~a~~~~~~VIn~S~G~~~g~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~g~~~----~~~~~~~~~vitVga~~~ 350 (625)
++|+|+++++++|||||||... ....+..++.++.++|++||+||||+|... ..+|+..+++|+||+++.
T Consensus 108 ~ai~~a~~~~~~Vin~S~G~~~------~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~Pa~~~~vi~Vga~~~ 181 (274)
T 1r0r_E 108 SGIEWATTNGMDVINMSLGGAS------GSTAMKQAVDNAYARGVVVVAAAGNSGNSGSTNTIGYPAKYDSVIAVGAVDS 181 (274)
T ss_dssp HHHHHHHHTTCSEEEECEEBSS------CCHHHHHHHHHHHHTTCEEEEECCSCCCCTTCCCCCBTTTSTTSEEEEEECT
T ss_pred HHHHHHHHcCCCEEEeCCCCCC------CcHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCccccCCCCCCcEEEEEEecC
Confidence 9999999999999999999873 246678888899999999999999999763 456778899999998432
Q ss_pred CCceeeEEEeCCCeeeeeeecccCCCCCCceeeEEecCCCCCcccccccCCCCCCCccCceEEEEecCCCchhhHHHHHH
Q 006930 351 DRNFPAEVRLGDGRRLSGVSLYAGAPLSEKMYPLIYPGKSGVLSASLCMENSLDPNLVRGKIVICDRGSSPRVAKGLVVK 430 (625)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~i~~~~~g~~~~~~~~~~~~ 430 (625)
T Consensus 182 -------------------------------------------------------------------------------- 181 (274)
T 1r0r_E 182 -------------------------------------------------------------------------------- 181 (274)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HcCceEEEEEeCCCCCCccccCCCccCEEEeChhhHHHHHHHHHcCCCCeEEEEecceeecCcCCCcccccCCCCCCCCC
Q 006930 431 KAGGVGMILANGISNGEGLVGDAHLLPACALGSDEGDAVKAYISSTANPTATIDFKGTILGIKPAPVVASFSARGPNGLN 510 (625)
Q Consensus 431 ~~g~~g~~~~~~~~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fSs~Gp~~~~ 510 (625)
.+.++.||++||..
T Consensus 182 ----------------------------------------------------------------~~~~~~~S~~G~~~-- 195 (274)
T 1r0r_E 182 ----------------------------------------------------------------NSNRASFSSVGAEL-- 195 (274)
T ss_dssp ----------------------------------------------------------------TSCBCTTCCCSTTE--
T ss_pred ----------------------------------------------------------------CCCcCccCCCCCCc--
Confidence 23678999999864
Q ss_pred CCCCCCccccCCCcEEeeecCCCCCCCCCCCcccccccccCchhhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHhccccc
Q 006930 511 PEILKPDLIAPGVNILAAWTEAVGPTGLDSDLRKTEFNILSGTSMACPHVSGAAALLKSAHPDWSPAAIRSAMMTTASIV 590 (625)
Q Consensus 511 ~~~~KPdi~APG~~i~s~~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~p~lt~~~vk~~L~~tA~~~ 590 (625)
||+|||.+|+++++.+ .|..++|||||||+|||++|||+|++|+|+++|||++|++||+++
T Consensus 196 ------di~APG~~i~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~ 256 (274)
T 1r0r_E 196 ------EVMAPGAGVYSTYPTN-------------TYATLNGTSMASPHVAGAAALILSKHPNLSASQVRNRLSSTATYL 256 (274)
T ss_dssp ------EEEEECSSEEEEETTT-------------EEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTCBCC
T ss_pred ------eEEeCCCCeEeecCCC-------------CEEEeccHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhCccc
Confidence 9999999999998765 899999999999999999999999999999999999999999987
Q ss_pred cCCCCCCccCCCCCCCCCCcccccccCccccCC
Q 006930 591 DNSNQPMTDEATGNASTPYDFGAGHVNLDRAMD 623 (625)
Q Consensus 591 ~~~~~~~~~~~~~~~~~~~~~G~G~ld~~~Al~ 623 (625)
. ++..||||+||+++||+
T Consensus 257 g---------------~~~~~G~G~~~~~~A~~ 274 (274)
T 1r0r_E 257 G---------------SSFYYGKGLINVEAAAQ 274 (274)
T ss_dssp S---------------CHHHHTTCBCCHHHHTC
T ss_pred C---------------CCCCcccCccCHHHHhC
Confidence 3 33589999999999986
No 12
>1to2_E Subtilisin BPN'; serine protease, hydrolase; HET: CIT 15P; 1.30A {Bacillus amyloliquefaciens} SCOP: c.41.1.1 PDB: 1tm1_E* 1tm3_E* 1tm4_E* 1lw6_E* 1tm7_E* 1tmg_E* 1to1_E* 1tm5_E* 1y1k_E* 1y33_E* 1y34_E* 1y3b_E* 1y3c_E* 1y3d_E* 1y3f_E* 1y48_E* 1y4a_E* 1y4d_E 1sup_A* 1sib_E ...
Probab=100.00 E-value=1.2e-53 Score=431.55 Aligned_cols=266 Identities=32% Similarity=0.490 Sum_probs=221.1
Q ss_pred ccccccc--CCCccCCCCCCccEEEEcccccCCCCCCCCCCCCCCCCCCccccccccccccccCCCcceeeeeeeccccc
Q 006930 116 FLGLRNQ--QGLWSESDYGSDVIIGVFDTGIWPERRSFSDLNIGSIPSKWKGVCQVGVKFTAKNCNKKIIGARFFSKGHE 193 (625)
Q Consensus 116 ~~~~~~~--~~~~~~~~tG~gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~ 193 (625)
.|++..+ +.+|..+++|+||+|+|||||||++||+|+ +...++|...
T Consensus 5 ~w~l~~i~~~~~~~~g~~G~gv~VaViDtGid~~h~~l~-----------------------------~~~g~~~~~~-- 53 (281)
T 1to2_E 5 PYGVSQIKAPALHSQGYTGSNVKVAVIDSGIDSSHPDLK-----------------------------VAGGASMVPS-- 53 (281)
T ss_dssp CHHHHHTTHHHHHHHTCSCTTCEEEEEESCCCTTCTTCC-----------------------------EEEEEECCTT--
T ss_pred CcchhhcChHHHHhcCCCCCCCEEEEEcCCCCCCCHHHc-----------------------------CcCCccccCC--
Confidence 3555443 568999999999999999999999999994 1222233221
Q ss_pred ccCCCCCCCCCCCCCccccCCCCCCCCCccccchhhccccCCCCCcccccCccccccCCccceeeeeeccCCCCCChhhH
Q 006930 194 AAGGSAGPIGGGINETVEFMSPRDADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKARLAVYKVCWKNAGCFDSDI 273 (625)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~~~~~~~~i 273 (625)
. ..+..|..+|||||||||+|.. +.. | +.||||+|+|+.+|+++.++....+++
T Consensus 54 ----~-------------~~~~~d~~gHGT~vAgiia~~~-~~~---g-----~~GvAp~a~l~~~kv~~~~g~~~~~~i 107 (281)
T 1to2_E 54 ----E-------------TNPFQDNNSHGTHVAGTVAALN-NSI---G-----VLGVAPSASLYAVKVLGADGSGQYSWI 107 (281)
T ss_dssp ----C-------------CCTTCCSSSHHHHHHHHHHCCS-SSS---S-----BCCSSTTSEEEEEECSCTTSEECHHHH
T ss_pred ----C-------------CCCCCCCCCcHHHHHHHHhccC-CCC---c-----ceeeCCCCEEEEEEEeCCCCCccHHHH
Confidence 1 1123678999999999999973 221 2 389999999999999988666788899
Q ss_pred HHHHHHHHHcCCCEEEeccCCCCCCCCCCCCChHHhhHHHhhhCCcEEEEecCCCCCCC----CcccCCCCceEEeecCC
Q 006930 274 LAAFDAAVNDGVDVISISIGGGDGISSPYYLDPIAIGSYGAASRGVFVSSSAGNDGPNG----MSVTNLAPWIVTVGAGT 349 (625)
Q Consensus 274 ~~ai~~a~~~~~~VIn~S~G~~~g~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~g~~~----~~~~~~~~~vitVga~~ 349 (625)
+++|+|+++++++|||||||... ....+..++.++.++|++||+||||+|... ..+|+..+++|+||+++
T Consensus 108 ~~ai~~a~~~~~~Vin~S~G~~~------~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~Pa~~~~vi~Vga~~ 181 (281)
T 1to2_E 108 INGIEWAIANNMDVINMSLGGPS------GSAALKAAVDKAVASGVVVVAAAGNEGTSGSSSTVGYPGKYPSVIAVGAVD 181 (281)
T ss_dssp HHHHHHHHHTTCSEEEECEEBSC------CCHHHHHHHHHHHHTTCEEEEECCSCCCCTTSCCCCBTTTSTTSEEEEEEC
T ss_pred HHHHHHHHHCCCcEEEECCcCCC------CCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccccCcCCCCEEEEEEec
Confidence 99999999999999999999873 246778888889999999999999999763 45677889999999843
Q ss_pred CCCceeeEEEeCCCeeeeeeecccCCCCCCceeeEEecCCCCCcccccccCCCCCCCccCceEEEEecCCCchhhHHHHH
Q 006930 350 IDRNFPAEVRLGDGRRLSGVSLYAGAPLSEKMYPLIYPGKSGVLSASLCMENSLDPNLVRGKIVICDRGSSPRVAKGLVV 429 (625)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~i~~~~~g~~~~~~~~~~~ 429 (625)
.
T Consensus 182 ~------------------------------------------------------------------------------- 182 (281)
T 1to2_E 182 S------------------------------------------------------------------------------- 182 (281)
T ss_dssp T-------------------------------------------------------------------------------
T ss_pred C-------------------------------------------------------------------------------
Confidence 2
Q ss_pred HHcCceEEEEEeCCCCCCccccCCCccCEEEeChhhHHHHHHHHHcCCCCeEEEEecceeecCcCCCcccccCCCCCCCC
Q 006930 430 KKAGGVGMILANGISNGEGLVGDAHLLPACALGSDEGDAVKAYISSTANPTATIDFKGTILGIKPAPVVASFSARGPNGL 509 (625)
Q Consensus 430 ~~~g~~g~~~~~~~~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fSs~Gp~~~ 509 (625)
.+.+++||++||..
T Consensus 183 -----------------------------------------------------------------~~~~~~fS~~G~~~- 196 (281)
T 1to2_E 183 -----------------------------------------------------------------SNQRASFSSVGPEL- 196 (281)
T ss_dssp -----------------------------------------------------------------TSCBCTTCCCSTTC-
T ss_pred -----------------------------------------------------------------CCCcCCcCCCCCCc-
Confidence 23678999999965
Q ss_pred CCCCCCCccccCCCcEEeeecCCCCCCCCCCCcccccccccCchhhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHhcccc
Q 006930 510 NPEILKPDLIAPGVNILAAWTEAVGPTGLDSDLRKTEFNILSGTSMACPHVSGAAALLKSAHPDWSPAAIRSAMMTTASI 589 (625)
Q Consensus 510 ~~~~~KPdi~APG~~i~s~~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~p~lt~~~vk~~L~~tA~~ 589 (625)
||+|||.+|+++.+.+ .|..++|||||||+|||++|||+|++|+|+++|||++|++||++
T Consensus 197 -------di~APG~~i~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~ 256 (281)
T 1to2_E 197 -------DVMAPGVSIQSTLPGN-------------KYGAYNGTSMASPHVAGAAALILSKHPNWTNTQVRSSLENTTTK 256 (281)
T ss_dssp -------CEEEECSSEEEEETTT-------------EEEEECBHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHTTCBC
T ss_pred -------eEEecCCCeEeecCCC-------------CEEecCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHhhCcc
Confidence 9999999999998765 79999999999999999999999999999999999999999998
Q ss_pred ccCCCCCCccCCCCCCCCCCcccccccCccccCCC
Q 006930 590 VDNSNQPMTDEATGNASTPYDFGAGHVNLDRAMDP 624 (625)
Q Consensus 590 ~~~~~~~~~~~~~~~~~~~~~~G~G~ld~~~Al~~ 624 (625)
+. ++..||||+||+++|+++
T Consensus 257 ~g---------------~~~~~G~G~v~~~~a~~~ 276 (281)
T 1to2_E 257 LG---------------DSFYYGKGLINVQAAAQH 276 (281)
T ss_dssp CS---------------CHHHHTTCBCCHHHHTSS
T ss_pred cC---------------CCCCcccceecHHHHhhh
Confidence 73 335899999999999875
No 13
>4h6x_A Thiazoline oxidase/subtilisin-like protease; hydrolase; 2.00A {Prochloron didemni} PDB: 4aks_A 4akt_A
Probab=100.00 E-value=5.2e-55 Score=456.71 Aligned_cols=306 Identities=21% Similarity=0.210 Sum_probs=198.6
Q ss_pred ccCCCccCCCCCCccEEEEcccccCCCCCCCCCCCCCCCCCCccccccccccccccC---CCc-ceeeeeeecccccccC
Q 006930 121 NQQGLWSESDYGSDVIIGVFDTGIWPERRSFSDLNIGSIPSKWKGVCQVGVKFTAKN---CNK-KIIGARFFSKGHEAAG 196 (625)
Q Consensus 121 ~~~~~~~~~~tG~gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~g~~~~~~~---~~~-~i~~~~~~~~~~~~~~ 196 (625)
.+.++|+.+..|++|+|||||||||++||+|.+...++....|+..++......... ... ...+.......+...
T Consensus 19 G~~~~w~~~~g~~~V~VaViDtGiD~~Hpdf~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 97 (357)
T 4h6x_A 19 GLADLHNQTLGDPQITIVIIDGDPDYTLSCFEGAEVSKVFPYWHEPAEPITPEDYAAFQSIRDQGLKGKEKEEALEAVI- 97 (357)
T ss_dssp THHHHHHHCSCCTTSEEEEEESCCCTTSGGGTTCEEEECCCTTSCCCCCCCHHHHHHHHHHHHHTCCSHHHHHHHHHHC-
T ss_pred CHHHHHHhcCCCCCCEEEEEcCCCCCCChhHcCCCcccccccccccccccCcccccccccccCcccccccccccccccc-
Confidence 345689999989999999999999999999998777777777776544211100000 000 000000000000000
Q ss_pred CCCCCCCCCCCCccccCCCCCCCCCccccchhhccccCCCCCcccccCccccccCCccceeeeeeccCCC-----CCChh
Q 006930 197 GSAGPIGGGINETVEFMSPRDADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKARLAVYKVCWKNA-----GCFDS 271 (625)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~~-----~~~~~ 271 (625)
.+..++.|.+||||||||||+|+.+++ +.||||+|+|+.+|++.... .....
T Consensus 98 -------------~~~~~~~D~~gHGThVAGiiag~~~~g----------~~GvAp~a~l~~~k~~~~~~~~~~~~~~~~ 154 (357)
T 4h6x_A 98 -------------PDTKDRIVLNDHACHVTSTIVGQEHSP----------VFGIAPNCRVINMPQDAVIRGNYDDVMSPL 154 (357)
T ss_dssp -------------TTTHHHHHHHHHHHHHHHHHHCCTTSS----------CCCSCTTSEEEEEECTTC----------CH
T ss_pred -------------CCCCCCcCCCCcHHHHHHHHhccCCCC----------ceEeeccceEEeeeecccCCCCccccccHH
Confidence 011234567899999999999975331 48999999999999975421 23455
Q ss_pred hHHHHHHHHHHcCCCEEEeccCCCCCCCCCCCCChHHhhHHHhhhCCcEEEEecCCCCCCCCcccCCCCceEEeecCCCC
Q 006930 272 DILAAFDAAVNDGVDVISISIGGGDGISSPYYLDPIAIGSYGAASRGVFVSSSAGNDGPNGMSVTNLAPWIVTVGAGTID 351 (625)
Q Consensus 272 ~i~~ai~~a~~~~~~VIn~S~G~~~g~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~~~vitVga~~~~ 351 (625)
+++++|+|+++++++|||||||... ......+.+..++.++.++|+++|+||||++.....+|+..+++|+|||++.
T Consensus 155 ~~~~ai~~a~~~g~~Vin~S~G~~~--~~~~~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~- 231 (357)
T 4h6x_A 155 NLARAIDLALELGANIIHCAFCRPT--QTSEGEEILVQAIKKCQDNNVLIVSPTGNNSNESWCLPAVLPGTLAVGAAKV- 231 (357)
T ss_dssp HHHHHHHHHHHTTCSEEEEC-------------CHHHHHHHHHHHTTCEEEEECC---------------CEEEEEECT-
T ss_pred HHHHHHHHHHHcCCCEEeeccccCC--ccccchhHHHHHHHHHhhCCeEEEecccCCCCCcCcCcccCCCCceEEEecc-
Confidence 7889999999999999999999874 2334466788888899999999999999999988888999999999998432
Q ss_pred CceeeEEEeCCCeeeeeeecccCCCCCCceeeEEecCCCCCcccccccCCCCCCCccCceEEEEecCCCchhhHHHHHHH
Q 006930 352 RNFPAEVRLGDGRRLSGVSLYAGAPLSEKMYPLIYPGKSGVLSASLCMENSLDPNLVRGKIVICDRGSSPRVAKGLVVKK 431 (625)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~i~~~~~g~~~~~~~~~~~~~ 431 (625)
T Consensus 232 -------------------------------------------------------------------------------- 231 (357)
T 4h6x_A 232 -------------------------------------------------------------------------------- 231 (357)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCceEEEEEeCCCCCCccccCCCccCEEEeChhhHHHHHHHHHcCCCCeEEEEecceeecCcCCCcccccCCCCCCCCCC
Q 006930 432 AGGVGMILANGISNGEGLVGDAHLLPACALGSDEGDAVKAYISSTANPTATIDFKGTILGIKPAPVVASFSARGPNGLNP 511 (625)
Q Consensus 432 ~g~~g~~~~~~~~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fSs~Gp~~~~~ 511 (625)
.+.+++|||||+.
T Consensus 232 ---------------------------------------------------------------~~~~~~fSn~G~~---- 244 (357)
T 4h6x_A 232 ---------------------------------------------------------------DGTPCHFSNWGGN---- 244 (357)
T ss_dssp ---------------------------------------------------------------TSSBCTTCC---C----
T ss_pred ---------------------------------------------------------------CCcccccccCCCC----
Confidence 2367899999974
Q ss_pred CCCCCccccCCCcEEeeecCCCCCCCCCCCcccccccccCchhhhHHHHHHHHHHHHHh----CCCCCHHHHHHHHHhcc
Q 006930 512 EILKPDLIAPGVNILAAWTEAVGPTGLDSDLRKTEFNILSGTSMACPHVSGAAALLKSA----HPDWSPAAIRSAMMTTA 587 (625)
Q Consensus 512 ~~~KPdi~APG~~i~s~~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~----~p~lt~~~vk~~L~~tA 587 (625)
..||||+|||.+|+++.+.+. .|..++|||||||||||++|||+++ +|.|+++|||++|++||
T Consensus 245 -~~~~di~APG~~i~s~~~~~~------------~~~~~sGTS~AaP~vaG~~All~s~~~~~~~~lt~~~v~~~L~~tA 311 (357)
T 4h6x_A 245 -NTKEGILAPGEEILGAQPCTE------------EPVRLTGTSMAAPVMTGISALLMSLQVQQGKPVDAEAVRTALLKTA 311 (357)
T ss_dssp -TTTTEEEEECSSEEECCTTCS------------CCEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHC-
T ss_pred -CCccceeecCCCeEeccCCCC------------cccccCcHHHHHHHHHHHHHHHHHhhHhhCCCCCHHHHHHHHHhhC
Confidence 458999999999999987652 5678999999999999999999964 66899999999999999
Q ss_pred ccccCCCCCCccCCCCCCCCCCcccccccCccccCC
Q 006930 588 SIVDNSNQPMTDEATGNASTPYDFGAGHVNLDRAMD 623 (625)
Q Consensus 588 ~~~~~~~~~~~~~~~~~~~~~~~~G~G~ld~~~Al~ 623 (625)
+++.... ...+.+||||+||+++||+
T Consensus 312 ~~~~~~~----------~~~~~~~G~G~vn~~~A~~ 337 (357)
T 4h6x_A 312 IPCDPEV----------VEEPERCLRGFVNIPGAMK 337 (357)
T ss_dssp -----------------------CTTCBCCHHHHHH
T ss_pred ccCCCCC----------CCCcccceeEEecHHHHHH
Confidence 9875322 2344589999999999874
No 14
>1thm_A Thermitase; hydrolase(serine protease); 1.37A {Thermoactinomyces vulgaris} SCOP: c.41.1.1 PDB: 2tec_E 1tec_E 3tec_E
Probab=100.00 E-value=5.7e-53 Score=426.45 Aligned_cols=265 Identities=29% Similarity=0.407 Sum_probs=223.1
Q ss_pred cccccc--cCCCccCCCCCCccEEEEcccccCCCCCCCCCCCCCCCCCCccccccccccccccCCCcceeeeeeeccccc
Q 006930 116 FLGLRN--QQGLWSESDYGSDVIIGVFDTGIWPERRSFSDLNIGSIPSKWKGVCQVGVKFTAKNCNKKIIGARFFSKGHE 193 (625)
Q Consensus 116 ~~~~~~--~~~~~~~~~tG~gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~ 193 (625)
.|++.. ++.+|+.+ +|+||+|+|||||||++||+|.+ +++..++|..
T Consensus 12 ~w~l~~i~~~~aw~~~-~G~gv~VaViDtGvd~~h~~l~~---------------------------~~~~~~~~~~--- 60 (279)
T 1thm_A 12 QYGPQKIQAPQAWDIA-EGSGAKIAIVDTGVQSNHPDLAG---------------------------KVVGGWDFVD--- 60 (279)
T ss_dssp CCHHHHTTHHHHHTTC-CCTTCEEEEEESCCCTTCTTTTT---------------------------TEEEEEETTT---
T ss_pred ccChhhCChHHHHhcC-CCCCCEEEEEccCCCCCCcchhc---------------------------CccccccccC---
Confidence 355443 35688887 69999999999999999999974 2344444433
Q ss_pred ccCCCCCCCCCCCCCccccCCCCCCCCCccccchhhccccCCCCCcccccCccccccCCccceeeeeeccCCCCCChhhH
Q 006930 194 AAGGSAGPIGGGINETVEFMSPRDADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKARLAVYKVCWKNAGCFDSDI 273 (625)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~~~~~~~~i 273 (625)
.+ ..+.|..+|||||||||+|...++.+ +.||||+|+|+.+|+++.++.++.+++
T Consensus 61 ---~~--------------~~~~d~~gHGT~vAgiia~~~~n~~g--------~~GvAp~a~l~~~~v~~~~g~~~~~~~ 115 (279)
T 1thm_A 61 ---ND--------------STPQNGNGHGTHCAGIAAAVTNNSTG--------IAGTAPKASILAVRVLDNSGSGTWTAV 115 (279)
T ss_dssp ---TB--------------SCCCCSSSHHHHHHHHHHCCCSSSSS--------CCCSSTTCEEEEEECSCTTSCCCHHHH
T ss_pred ---CC--------------CCCCCCCCcHHHHHHHHhCccCCCCc--------cEEeCCCCEEEEEEeeCCCCCccHHHH
Confidence 11 34567899999999999998755433 379999999999999988677788899
Q ss_pred HHHHHHHHHcCCCEEEeccCCCCCCCCCCCCChHHhhHHHhhhCCcEEEEecCCCCCCCCcccCCCCceEEeecCCCCCc
Q 006930 274 LAAFDAAVNDGVDVISISIGGGDGISSPYYLDPIAIGSYGAASRGVFVSSSAGNDGPNGMSVTNLAPWIVTVGAGTIDRN 353 (625)
Q Consensus 274 ~~ai~~a~~~~~~VIn~S~G~~~g~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~~~vitVga~~~~~~ 353 (625)
+++|+|+++++++|||||||... ....+..++.++.++|+++|+||||++.....+|+..+++|+||+++.
T Consensus 116 ~~ai~~a~~~g~~Vin~S~G~~~------~~~~l~~ai~~a~~~gvlvV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~--- 186 (279)
T 1thm_A 116 ANGITYAADQGAKVISLSLGGTV------GNSGLQQAVNYAWNKGSVVVAAAGNAGNTAPNYPAYYSNAIAVASTDQ--- 186 (279)
T ss_dssp HHHHHHHHHTTCSEEEECCCBSS------CCHHHHHHHHHHHHTTCEEEEECCSSSSCCCCBTTTSTTEEEEEEECT---
T ss_pred HHHHHHHHHCCCCEEEEecCCCC------CCHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCcccCCCeEEEEEeCC---
Confidence 99999999999999999999872 245678888889999999999999999888888899999999998432
Q ss_pred eeeEEEeCCCeeeeeeecccCCCCCCceeeEEecCCCCCcccccccCCCCCCCccCceEEEEecCCCchhhHHHHHHHcC
Q 006930 354 FPAEVRLGDGRRLSGVSLYAGAPLSEKMYPLIYPGKSGVLSASLCMENSLDPNLVRGKIVICDRGSSPRVAKGLVVKKAG 433 (625)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~i~~~~~g~~~~~~~~~~~~~~g 433 (625)
T Consensus 187 -------------------------------------------------------------------------------- 186 (279)
T 1thm_A 187 -------------------------------------------------------------------------------- 186 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceEEEEEeCCCCCCccccCCCccCEEEeChhhHHHHHHHHHcCCCCeEEEEecceeecCcCCCcccccCCCCCCCCCCCC
Q 006930 434 GVGMILANGISNGEGLVGDAHLLPACALGSDEGDAVKAYISSTANPTATIDFKGTILGIKPAPVVASFSARGPNGLNPEI 513 (625)
Q Consensus 434 ~~g~~~~~~~~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~ 513 (625)
.+.+++||++|+..
T Consensus 187 -------------------------------------------------------------~~~~~~fS~~G~~~----- 200 (279)
T 1thm_A 187 -------------------------------------------------------------NDNKSSFSTYGSWV----- 200 (279)
T ss_dssp -------------------------------------------------------------TSCBCTTCCCCTTC-----
T ss_pred -------------------------------------------------------------CCCcCCcCCCCCce-----
Confidence 13678999999875
Q ss_pred CCCccccCCCcEEeeecCCCCCCCCCCCcccccccccCchhhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHhccccccCC
Q 006930 514 LKPDLIAPGVNILAAWTEAVGPTGLDSDLRKTEFNILSGTSMACPHVSGAAALLKSAHPDWSPAAIRSAMMTTASIVDNS 593 (625)
Q Consensus 514 ~KPdi~APG~~i~s~~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~p~lt~~~vk~~L~~tA~~~~~~ 593 (625)
||+|||++|+++.+.+ .|..++|||||||+|||++||| ++|.++++|||++|++||+++...
T Consensus 201 ---dv~APG~~i~s~~~~~-------------~~~~~sGTS~AaP~VaG~aAll--~~p~~t~~~v~~~L~~ta~~~~~~ 262 (279)
T 1thm_A 201 ---DVAAPGSSIYSTYPTS-------------TYASLSGTSMATPHVAGVAGLL--ASQGRSASNIRAAIENTADKISGT 262 (279)
T ss_dssp ---CEEEECSSEEEEETTT-------------EEEEECSHHHHHHHHHHHHHHH--HTTTCCHHHHHHHHHHTCBCCTTB
T ss_pred ---EEEEcCCCeEEEeCCC-------------CEEEcccHHHHHHHHHHHHHHH--HCCCcCHHHHHHHHHHhCccCCCC
Confidence 9999999999998765 8999999999999999999999 579999999999999999998632
Q ss_pred CCCCccCCCCCCCCCCcccccccCccccCC
Q 006930 594 NQPMTDEATGNASTPYDFGAGHVNLDRAMD 623 (625)
Q Consensus 594 ~~~~~~~~~~~~~~~~~~G~G~ld~~~Al~ 623 (625)
+ ..||||+||+++||+
T Consensus 263 ~--------------~~~G~G~vn~~~A~~ 278 (279)
T 1thm_A 263 G--------------TYWAKGRVNAYKAVQ 278 (279)
T ss_dssp T--------------TTBSSEECCHHHHHH
T ss_pred C--------------ccccCCeeCHHHHhc
Confidence 2 379999999999985
No 15
>2x8j_A Intracellular subtilisin protease; hydrolase, serine protease, intracellular proteinase regulat; HET: CSX 1PE; 1.56A {Bacillus clausii} PDB: 2wv7_A 2wwt_A 2xrm_A*
Probab=100.00 E-value=3.8e-53 Score=436.99 Aligned_cols=271 Identities=29% Similarity=0.411 Sum_probs=219.2
Q ss_pred cccccc--cCCCccCCCCCCccEEEEcccccCCCCCCCCCCCCCCCCCCccccccccccccccCCCcceeeeeeeccccc
Q 006930 116 FLGLRN--QQGLWSESDYGSDVIIGVFDTGIWPERRSFSDLNIGSIPSKWKGVCQVGVKFTAKNCNKKIIGARFFSKGHE 193 (625)
Q Consensus 116 ~~~~~~--~~~~~~~~~tG~gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~ 193 (625)
.|++.. ++.+|+.+++|+||+|+|||||||++||+|.+ ++...++|...+.
T Consensus 22 ~w~l~~i~~~~aw~~~~~G~gv~VaViDtGid~~Hp~l~~---------------------------~~~~~~~~~~~~~ 74 (327)
T 2x8j_A 22 PMGVEIVEAPAVWRASAKGAGQIIGVIDTGCQVDHPDLAE---------------------------RIIGGVNLTTDYG 74 (327)
T ss_dssp CHHHHHTTHHHHHHHHGGGTTCEEEEEESCCCTTCTTTGG---------------------------GEEEEEECSSGGG
T ss_pred CcchhhcChHHHHhcCCCCCCCEEEEEcCCCCCCChhHhh---------------------------cccCCccccCCCC
Confidence 455543 45789999999999999999999999999963 3444555554321
Q ss_pred ccCCCCCCCCCCCCCccccCCCCCCCCCccccchhhccccCCCCCcccccCccccccCCccceeeeeeccCCCCCChhhH
Q 006930 194 AAGGSAGPIGGGINETVEFMSPRDADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKARLAVYKVCWKNAGCFDSDI 273 (625)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~~~~~~~~i 273 (625)
. +.....|..||||||||||+|.. ++. | +.||||+|+|+.+|+++.++.+..+++
T Consensus 75 ~----------------~~~~~~d~~gHGT~VAgiia~~~-~~~---g-----~~GvAp~a~l~~~kv~~~~g~~~~~~i 129 (327)
T 2x8j_A 75 G----------------DETNFSDNNGHGTHVAGTVAAAE-TGS---G-----VVGVAPKADLFIIKALSGDGSGEMGWI 129 (327)
T ss_dssp G----------------CTTCCCCSSSHHHHHHHHHHCCC-CSS---B-----CCCSSTTCEEEEEECSCTTSEECHHHH
T ss_pred C----------------CCCCCCCCCCchHHHHHHHhccC-CCC---C-----cEeeCCCCEEEEEEeECCCCCcCHHHH
Confidence 1 11235688999999999999984 221 2 389999999999999988666788899
Q ss_pred HHHHHHHHH------cCCCEEEeccCCCCCCCCCCCCChHHhhHHHhhhCCcEEEEecCCCCCCC-----CcccCCCCce
Q 006930 274 LAAFDAAVN------DGVDVISISIGGGDGISSPYYLDPIAIGSYGAASRGVFVSSSAGNDGPNG-----MSVTNLAPWI 342 (625)
Q Consensus 274 ~~ai~~a~~------~~~~VIn~S~G~~~g~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~g~~~-----~~~~~~~~~v 342 (625)
++||+|+++ .+++|||||||... ....+..++.++.++|++||+||||+|... ..+|+..+++
T Consensus 130 ~~ai~~a~~~~~~~~~~~~Vin~S~G~~~------~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~~Pa~~~~v 203 (327)
T 2x8j_A 130 AKAIRYAVDWRGPKGEQMRIITMSLGGPT------DSEELHDAVKYAVSNNVSVVCAAGNEGDGREDTNEFAYPAAYNEV 203 (327)
T ss_dssp HHHHHHHHHCCCTTSCCCSEEEECEEBSC------CCHHHHHHHHHHHHTTCEEEEECCCT---------TCBTTTSTTS
T ss_pred HHHHHHHHhhcccccCCceEEEECCCcCC------CCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCceeccccCCCE
Confidence 999999999 89999999999872 246677888889999999999999999752 4567788999
Q ss_pred EEeecCCCCCceeeEEEeCCCeeeeeeecccCCCCCCceeeEEecCCCCCcccccccCCCCCCCccCceEEEEecCCCch
Q 006930 343 VTVGAGTIDRNFPAEVRLGDGRRLSGVSLYAGAPLSEKMYPLIYPGKSGVLSASLCMENSLDPNLVRGKIVICDRGSSPR 422 (625)
Q Consensus 343 itVga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~i~~~~~g~~~~ 422 (625)
|+||+++.
T Consensus 204 i~Vga~~~------------------------------------------------------------------------ 211 (327)
T 2x8j_A 204 IAVGAVDF------------------------------------------------------------------------ 211 (327)
T ss_dssp EEEEEECT------------------------------------------------------------------------
T ss_pred EEEEEECC------------------------------------------------------------------------
Confidence 99998432
Q ss_pred hhHHHHHHHcCceEEEEEeCCCCCCccccCCCccCEEEeChhhHHHHHHHHHcCCCCeEEEEecceeecCcCCCcccccC
Q 006930 423 VAKGLVVKKAGGVGMILANGISNGEGLVGDAHLLPACALGSDEGDAVKAYISSTANPTATIDFKGTILGIKPAPVVASFS 502 (625)
Q Consensus 423 ~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fS 502 (625)
.+.+++||
T Consensus 212 ------------------------------------------------------------------------~~~~~~fS 219 (327)
T 2x8j_A 212 ------------------------------------------------------------------------DLRLSDFT 219 (327)
T ss_dssp ------------------------------------------------------------------------TCCBSCC-
T ss_pred ------------------------------------------------------------------------CCCCCCcc
Confidence 13678999
Q ss_pred CCCCCCCCCCCCCCccccCCCcEEeeecCCCCCCCCCCCcccccccccCchhhhHHHHHHHHHHHHHh-----CCCCCHH
Q 006930 503 ARGPNGLNPEILKPDLIAPGVNILAAWTEAVGPTGLDSDLRKTEFNILSGTSMACPHVSGAAALLKSA-----HPDWSPA 577 (625)
Q Consensus 503 s~Gp~~~~~~~~KPdi~APG~~i~s~~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~-----~p~lt~~ 577 (625)
++||.. ||+|||++|+++.+.+ .|..++|||||||+|||++|||+|+ +|.|++.
T Consensus 220 ~~G~~~--------di~APG~~i~s~~~~~-------------~~~~~sGTS~AaP~VaG~aAll~~~~~~~~~p~ls~~ 278 (327)
T 2x8j_A 220 NTNEEI--------DIVAPGVGIKSTYLDS-------------GYAELSGTAMAAPHVAGALALIINLAEDAFKRSLSET 278 (327)
T ss_dssp --CCCC--------SEEEECSSEEEECSTT-------------CEEEEESGGGTHHHHHHHHHHHHHHHHHHHTSCCCHH
T ss_pred CCCCCc--------eEecCcCceEeecCCC-------------CEEeecCHHHHHHHHHHHHHHHHHhhhhhcCCCCCHH
Confidence 999864 9999999999998765 7999999999999999999999999 9999999
Q ss_pred HHHHHHHhccccccCCCCCCccCCCCCCCCCCcccccccCccccCC
Q 006930 578 AIRSAMMTTASIVDNSNQPMTDEATGNASTPYDFGAGHVNLDRAMD 623 (625)
Q Consensus 578 ~vk~~L~~tA~~~~~~~~~~~~~~~~~~~~~~~~G~G~ld~~~Al~ 623 (625)
|||++|++||+++. .++..+|||+||+.+|++
T Consensus 279 ~v~~~L~~tA~~~g--------------~~~~~~G~G~vd~~~A~~ 310 (327)
T 2x8j_A 279 EIYAQLVRRATPIG--------------FTAQAEGNGFLTLDLVER 310 (327)
T ss_dssp HHHHHHHTTEECCS--------------SCHHHHTTCEECTTHHHH
T ss_pred HHHHHHHHhCccCC--------------CCCCceeeeEECHHHHHH
Confidence 99999999999874 234589999999999874
No 16
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=100.00 E-value=5.8e-52 Score=446.24 Aligned_cols=373 Identities=24% Similarity=0.346 Sum_probs=265.8
Q ss_pred ccccc--cCCCccCCCCCCccEEEEcccccCCCCCCCCCCCCCCCCCCccccccccccccccCCCcceeeeeeecccccc
Q 006930 117 LGLRN--QQGLWSESDYGSDVIIGVFDTGIWPERRSFSDLNIGSIPSKWKGVCQVGVKFTAKNCNKKIIGARFFSKGHEA 194 (625)
Q Consensus 117 ~~~~~--~~~~~~~~~tG~gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~ 194 (625)
|++.+ ++.+|+.+ |+||+|+|||||||++||+|.++ ++...++..
T Consensus 6 W~l~~i~~~~~w~~~--g~gv~VaViDtGvd~~Hp~l~~~---------------------------~~~~~~~~~---- 52 (441)
T 1y9z_A 6 WGQTFVGATVLSDSQ--AGNRTICIIDSGYDRSHNDLNAN---------------------------NVTGTNNSG---- 52 (441)
T ss_dssp HHHHHTTCSSSCCTT--GGGCEEEEEESCCCTTSTTTTTS---------------------------EEEECCCTT----
T ss_pred CChhhcChhhhhhcC--CCCcEEEEEcCCCCCCChhHhcC---------------------------cccCcccCC----
Confidence 55443 35688765 77999999999999999999742 111111111
Q ss_pred cCCCCCCCCCCCCCccccCCCCCCCCCccccchhhccccCCCCCcccccCccccccCCcc--ceeeeeeccCCCCCChhh
Q 006930 195 AGGSAGPIGGGINETVEFMSPRDADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKA--RLAVYKVCWKNAGCFDSD 272 (625)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GvAP~A--~l~~~kv~~~~~~~~~~~ 272 (625)
. .+...+.|..||||||||||++..++ .| +.||||+| +|+.+|++++++.+..++
T Consensus 53 --~------------~~~~~~~d~~gHGT~vAgiia~~~~~----~g-----~~GvAP~a~~~l~~~kv~~~~g~~~~~~ 109 (441)
T 1y9z_A 53 --T------------GNWYQPGNNNAHGTHVAGTIAAIANN----EG-----VVGVMPNQNANIHIVKVFNEAGWGYSSS 109 (441)
T ss_dssp --S------------CCTTCCCSSCCHHHHHHHHHHCCCSS----SB-----CCCSSCSSCSEEEEEECEETTEECCSSC
T ss_pred --C------------CCCCCCCCCCCcHHHHHHHHhcccCC----CC-----ceEecCCCCCEEEEEEEeCCCCCcCHHH
Confidence 0 01124567899999999999997632 12 38999995 899999998855578889
Q ss_pred HHHHHHHHHHc-CCCEEEeccCCCCCCCCCCCCChHHhhHHHhhhCCcEEEEecCCCCCCCCcccCCCCceEEeecCCCC
Q 006930 273 ILAAFDAAVND-GVDVISISIGGGDGISSPYYLDPIAIGSYGAASRGVFVSSSAGNDGPNGMSVTNLAPWIVTVGAGTID 351 (625)
Q Consensus 273 i~~ai~~a~~~-~~~VIn~S~G~~~g~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~~~vitVga~~~~ 351 (625)
+++||+||+++ +++|||||||... ....+..++.++.++|++||+||||+|.....+|+..+++|+|||++.+
T Consensus 110 ~~~ai~~a~~~~g~~Vin~S~G~~~------~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~VgA~~~~ 183 (441)
T 1y9z_A 110 LVAAIDTCVNSGGANVVTMSLGGSG------STTTERNALNTHYNNGVLLIAAAGNAGDSSYSYPASYDSVMSVAAVDSN 183 (441)
T ss_dssp HHHHHHHHHHTTCCSEEEECCCBSC------CBHHHHHHHHHHHHTTCEEEEECCSSSSSBCCBTTTSTTEEEEEEECTT
T ss_pred HHHHHHHHHHhcCCcEEEeCCCCCC------CCHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCCCCCCCeEEEEEECCC
Confidence 99999999999 9999999999873 2345677888899999999999999999888889999999999998776
Q ss_pred CceeeEEEeC-------------------CCe----eeeeeecccCCCCC-Cceee--EEecCC----CCCcccccccCC
Q 006930 352 RNFPAEVRLG-------------------DGR----RLSGVSLYAGAPLS-EKMYP--LIYPGK----SGVLSASLCMEN 401 (625)
Q Consensus 352 ~~~~~~~~~~-------------------~~~----~~~~~~~~~~~~~~-~~~~~--~~~~~~----~~~~~~~~c~~~ 401 (625)
.........+ ++. ++.+.+++...... ...++ +.|... ........|...
T Consensus 184 ~~~~~~S~~g~~vdv~ApG~~i~s~~~~g~g~~~~~~~~G~s~~~~~~~p~~~~~~~~~~~~~~~~~g~~~~~~~~C~~~ 263 (441)
T 1y9z_A 184 LDHAAFSQYTDQVEISGPGEAILSTVTVGEGRLADITIGGQSYFSNGVVPHNRLTPSGTSYAPAPINASATGALAECTVN 263 (441)
T ss_dssp CCBCTTSCCCTTEEEEEECSSEEEECSTTCEEEEEEEETTEECGGGCCEECEEEEEETTEEEECCCCCEEEEEEEEEEEE
T ss_pred CCCCccccCCCceEEEeccCCeeccccCCCcccceeecccccccccccCcccccccCCccccccccccccccchhccccc
Confidence 5322111111 111 11122221110000 00000 011100 001123457754
Q ss_pred --CCCCCccCceEEEEecCCC-----chhhHHHHHHHcCceEEEEEeCCCCCC---cc---ccCCCccCEEEeChhhHHH
Q 006930 402 --SLDPNLVRGKIVICDRGSS-----PRVAKGLVVKKAGGVGMILANGISNGE---GL---VGDAHLLPACALGSDEGDA 468 (625)
Q Consensus 402 --~~~~~~~~g~i~~~~~g~~-----~~~~~~~~~~~~g~~g~~~~~~~~~~~---~~---~~~~~~~p~~~i~~~~~~~ 468 (625)
.+...+++|+|++|+|+.| .+.++..++.++|+.+++++++..... .+ ......+|.+.++..+|..
T Consensus 264 ~~~~~~~~~~gkivl~~rg~~~~~~~~~~~~~~~~~~aGa~gvii~~~~~~~g~~~~~~~~~~~~~~~p~~~v~~~~g~~ 343 (441)
T 1y9z_A 264 GTSFSCGNMANKICLVERVGNQGSSYPEINSTKACKTAGAKGIIVYSNSALPGLQNPFLVDANSDITVPSVSVDRATGLA 343 (441)
T ss_dssp TTEEECCCCTTEEEEEECCSCSSSSCTHHHHHHHHHHTTCSEEEEECCTTSCSCCCCEEECTTCCCCSCEEEECHHHHHH
T ss_pred cccccCCCccccEEEEeccccCcccccHHHHHHHHHhcCCeEEEEEeCCCccccccccccccccCccccEEEEeHHHHHH
Confidence 4567889999999999876 778899999999999999998765321 11 1234679999999999999
Q ss_pred HHHHHHcCCCCeEEEEecceeecCcCCCcccccCCCCCCCCCCCCCCCccccCCCcEEeeecCCCCCCCCCCCccccccc
Q 006930 469 VKAYISSTANPTATIDFKGTILGIKPAPVVASFSARGPNGLNPEILKPDLIAPGVNILAAWTEAVGPTGLDSDLRKTEFN 548 (625)
Q Consensus 469 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPdi~APG~~i~s~~~~~~~~~~~~~~~~~~~y~ 548 (625)
|+.++.+. ++ +++.... .|.
T Consensus 344 l~~~~~~~----~t-------------------------------------------~~~~~~~-------------~y~ 363 (441)
T 1y9z_A 344 LKAKLGQS----TT-------------------------------------------VSNQGNQ-------------DYE 363 (441)
T ss_dssp HHTTTTSE----EE-------------------------------------------EEEEEEE-------------SEE
T ss_pred HHHHhcCC----cc-------------------------------------------cccccCC-------------Cce
Confidence 88764321 00 1111111 799
Q ss_pred ccCchhhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHhccccccCCCCCCccCCCCCCCCCCcccccccCccccCC
Q 006930 549 ILSGTSMACPHVSGAAALLKSAHPDWSPAAIRSAMMTTASIVDNSNQPMTDEATGNASTPYDFGAGHVNLDRAMD 623 (625)
Q Consensus 549 ~~sGTSmAaP~VAG~aALl~~~~p~lt~~~vk~~L~~tA~~~~~~~~~~~~~~~~~~~~~~~~G~G~ld~~~Al~ 623 (625)
.++|||||||||||++|||+|++|+|+|++||++|++||+++...+ ++.+||+|+||+++|++
T Consensus 364 ~~sGTSmAaP~VAG~aALl~~~~p~~sp~~ik~~L~~TA~~~~~~g------------~~~~~G~G~vn~~~A~~ 426 (441)
T 1y9z_A 364 YYNGTSMATPHVSGVATLVWSYHPECSASQVRAALNATADDLSVAG------------RDNQTGYGMINAVAAKA 426 (441)
T ss_dssp EECSHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHSBCCSSSS------------CBTTTBTCBCCHHHHHH
T ss_pred eecccccCCcccchHHHHHHHHCCCCCHHHHHHHHHhhchhhccCC------------CcccccccccCHHHHHH
Confidence 9999999999999999999999999999999999999999886433 34589999999999864
No 17
>2ixt_A 36KDA protease; serine protease, sphericase, subtilisin like protease, hydrolase; 0.8A {Bacillus sphaericus} SCOP: c.41.1.1 PDB: 3d43_A 1ea7_A* 2gko_A*
Probab=100.00 E-value=1.4e-51 Score=423.98 Aligned_cols=289 Identities=29% Similarity=0.378 Sum_probs=228.2
Q ss_pred cccccc--cCCCccCCCCCCccEEEEcccccCCCCCCCCCCCCCCCCCCccccccccccccccCCCcceeeeeeeccccc
Q 006930 116 FLGLRN--QQGLWSESDYGSDVIIGVFDTGIWPERRSFSDLNIGSIPSKWKGVCQVGVKFTAKNCNKKIIGARFFSKGHE 193 (625)
Q Consensus 116 ~~~~~~--~~~~~~~~~tG~gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~ 193 (625)
.|++.. ++.+|+.+++|+||+|+|||||||++||+|.++ +...++|....
T Consensus 7 ~W~l~~i~~~~~w~~~~~G~gv~VaViDtGvd~~H~~l~~~---------------------------~~~~~~~~~~~- 58 (310)
T 2ixt_A 7 PWGIKAIYNNDTLTSTTGGSGINIAVLDTGVNTSHPDLVNN---------------------------VEQCKDFTGAT- 58 (310)
T ss_dssp CHHHHHHHTCTTCCCCCCCTTCEEEEEESCCCTTCTTTTTT---------------------------EEEEEESSSSS-
T ss_pred CCchhhcCchhhhhccCCCCCcEEEEEecCCCCCCHHHhhc---------------------------ccccccccCCC-
Confidence 355543 467999999999999999999999999999742 33344444321
Q ss_pred ccCCCCCCCCCCCCCccccCCCCCCCCCccccchhhccccCCCCCcccccCccccccCCccceeeeeeccCCCCCChhhH
Q 006930 194 AAGGSAGPIGGGINETVEFMSPRDADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKARLAVYKVCWKNAGCFDSDI 273 (625)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~~~~~~~~i 273 (625)
........|..+|||||||||+|...++. ..+.||||+|+|+.+|++++.+.+..+++
T Consensus 59 ---------------~~~~~~~~d~~gHGT~vAgiia~~~~~n~-------~g~~GvAp~a~l~~~~v~~~~g~~~~~~~ 116 (310)
T 2ixt_A 59 ---------------TPINNSCTDRNGHGTHVAGTALADGGSDQ-------AGIYGVAPDADLWAYKVLLDSGSGYSDDI 116 (310)
T ss_dssp ---------------SCEETCCCCSSSHHHHHHHHHHCBCCTTS-------CSCBCSCTTSEEEEEECSCTTSCCCHHHH
T ss_pred ---------------CCCCCCCCCCCCCHHHHHHHHhccCCCCC-------CceEEECCCCEEEEEEEEcCCCCCcHHHH
Confidence 01113356789999999999999852221 11389999999999999988666788899
Q ss_pred HHHHHHHHHcCC-----CEEEeccCCCCCCCCCCCCChHHhhHHHhhhCCcEEEEecCCCCCC--CCcccCCCCceEEee
Q 006930 274 LAAFDAAVNDGV-----DVISISIGGGDGISSPYYLDPIAIGSYGAASRGVFVSSSAGNDGPN--GMSVTNLAPWIVTVG 346 (625)
Q Consensus 274 ~~ai~~a~~~~~-----~VIn~S~G~~~g~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~g~~--~~~~~~~~~~vitVg 346 (625)
+++|+|++++++ +|||||||... ....+..++.++.++|++||+||||+|.. ...+|+..+++|+||
T Consensus 117 ~~ai~~a~~~~~~~~~~~Vin~S~G~~~------~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~~~Pa~~~~vi~Vg 190 (310)
T 2ixt_A 117 AAAIRHAADQATATGTKTIISMSLGSSA------NNSLISSAVNYAYSKGVLIVAAAGNSGYSQGTIGYPGALPNAIAVA 190 (310)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEECCCBSS------CCHHHHHHHHHHHHTTCEEEEECCSCCSSTTCCCBTTTSTTSEEEE
T ss_pred HHHHHHHHHhhhccCCCeEEEEcCCCCC------CCHHHHHHHHHHHhCCcEEEEcCCCCCCCCCCCCCcccCCCeeEEE
Confidence 999999999887 99999999873 24667788888999999999999999976 456778889999999
Q ss_pred cCCCCCceeeEEEeCCCeeeeeeecccCCCCCCceeeEEecCCCCCcccccccCCCCCCCccCceEEEEecCCCchhhHH
Q 006930 347 AGTIDRNFPAEVRLGDGRRLSGVSLYAGAPLSEKMYPLIYPGKSGVLSASLCMENSLDPNLVRGKIVICDRGSSPRVAKG 426 (625)
Q Consensus 347 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~i~~~~~g~~~~~~~~ 426 (625)
+++...
T Consensus 191 a~~~~~-------------------------------------------------------------------------- 196 (310)
T 2ixt_A 191 ALENVQ-------------------------------------------------------------------------- 196 (310)
T ss_dssp EEEEEE--------------------------------------------------------------------------
T ss_pred eccccc--------------------------------------------------------------------------
Confidence 843100
Q ss_pred HHHHHcCceEEEEEeCCCCCCccccCCCccCEEEeChhhHHHHHHHHHcCCCCeEEEEecceeecCcCCC--cccccCCC
Q 006930 427 LVVKKAGGVGMILANGISNGEGLVGDAHLLPACALGSDEGDAVKAYISSTANPTATIDFKGTILGIKPAP--VVASFSAR 504 (625)
Q Consensus 427 ~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~a~fSs~ 504 (625)
..+ .++.||++
T Consensus 197 -------------------------------------------------------------------~~g~~~~~~~S~~ 209 (310)
T 2ixt_A 197 -------------------------------------------------------------------QNGTYRVADYSSR 209 (310)
T ss_dssp -------------------------------------------------------------------ETTEEEECTTSCC
T ss_pred -------------------------------------------------------------------cCCCeeeccccCC
Confidence 011 56889999
Q ss_pred CCCCCC----CCCCCCccccCCCcEEeeecCCCCCCCCCCCcccccccccCchhhhHHHHHHHHHHHHHhCCCCCHHHHH
Q 006930 505 GPNGLN----PEILKPDLIAPGVNILAAWTEAVGPTGLDSDLRKTEFNILSGTSMACPHVSGAAALLKSAHPDWSPAAIR 580 (625)
Q Consensus 505 Gp~~~~----~~~~KPdi~APG~~i~s~~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~p~lt~~~vk 580 (625)
||.... ..+.||||+|||.+|+++.+.+ .|..++|||||||+|||++|||+|++|+|+++|||
T Consensus 210 G~~~~~g~~~~~~~~~di~ApG~~i~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~ 276 (310)
T 2ixt_A 210 GYISTAGDYVIQEGDIEISAPGSSVYSTWYNG-------------GYNTISGTSMATPHVSGLAAKIWAENPSLSNTQLR 276 (310)
T ss_dssp CCTTTTTSSSCCTTCCCEEEECSSEEEECTTS-------------SEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHH
T ss_pred CCccCCccccccCCCeeEECCCCCEeeecCCC-------------CEEeeccHHHHHHHHHHHHHHHHHhCCCCCHHHHH
Confidence 995321 1345999999999999998765 79999999999999999999999999999999999
Q ss_pred HHHHhccccccCCCCCCccCCCCCCCCCCcccccccCcc
Q 006930 581 SAMMTTASIVDNSNQPMTDEATGNASTPYDFGAGHVNLD 619 (625)
Q Consensus 581 ~~L~~tA~~~~~~~~~~~~~~~~~~~~~~~~G~G~ld~~ 619 (625)
++|++||++++..+. ....++++..+|||++|+.
T Consensus 277 ~~L~~tA~~~~~~~~-----~~a~~g~d~~~G~G~~~vq 310 (310)
T 2ixt_A 277 SNLQERAKSVDIKGG-----YGAAIGDDYASGFGFARVQ 310 (310)
T ss_dssp HHHHHHHHTSCCCBS-----TTCCSSSBTTTBTCBCCC-
T ss_pred HHHHhhCcccCCCCC-----cccccCCccccccceeecC
Confidence 999999998764321 1234567789999999963
No 18
>3zxy_A Subtilisin-like protein; hydrolase; 1.58A {Prochloron didemni} PDB: 3zxx_A
Probab=100.00 E-value=1.6e-52 Score=424.75 Aligned_cols=266 Identities=25% Similarity=0.280 Sum_probs=211.0
Q ss_pred CCCC-CccEEEEcccccCCCCCCCCCCCCCCCCCCccccccccccccccCCCcceeeeeeecccccccCCCCCCCCCCCC
Q 006930 129 SDYG-SDVIIGVFDTGIWPERRSFSDLNIGSIPSKWKGVCQVGVKFTAKNCNKKIIGARFFSKGHEAAGGSAGPIGGGIN 207 (625)
Q Consensus 129 ~~tG-~gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (625)
.++| +||+|||||||||++||+|.++. +...++.. ..
T Consensus 3 ~l~G~~gV~VaViDtGid~~Hpdl~g~~---------------------------~~~~~~~~------~~--------- 40 (282)
T 3zxy_A 3 SLKGDHNIRVAILDGPVDIAHPCFQGAD---------------------------LTVLPTLA------PT--------- 40 (282)
T ss_dssp TCCCCTTSEEEEEESCCCTTSGGGTTCE---------------------------EEECCCSS------CC---------
T ss_pred CCcCCCCCEEEEEcCCCCCCChhHCCCe---------------------------eecCcCCC------CC---------
Confidence 4578 79999999999999999997531 11111111 00
Q ss_pred CccccCCCCCCCCCccccchhhccccCCCCCcccccCccccccCCccceeeeeeccCCC-CCChhhHHHHHHHHHHcCCC
Q 006930 208 ETVEFMSPRDADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKARLAVYKVCWKNA-GCFDSDILAAFDAAVNDGVD 286 (625)
Q Consensus 208 ~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~~-~~~~~~i~~ai~~a~~~~~~ 286 (625)
......|.+||||||||||+|+.+++ +.||||+|+|+.+|++.++. .....+++++|+|+++++++
T Consensus 41 ---~~~~d~~~~gHGT~VAGiiag~~~~~----------~~GvAp~a~l~~~kv~~~~~~~~~~~~i~~ai~~a~~~~~~ 107 (282)
T 3zxy_A 41 ---AARSDGFMSAHGTHVASIIFGQPETS----------VPGIAPQCRGLIVPIFSDDRRRITQLDLARGIERAVNAGAH 107 (282)
T ss_dssp ---CCCTTCHHHHHHHHHHHHHHCCTTSS----------SCCSSTTSEEEEEECSCSSSSCCCHHHHHHHHHHHHHTTCS
T ss_pred ---CCCCCCCCCCcccceeehhhccCCce----------eeeeccccceEeeEeeccccccchHHHHHHHHHHhhccCCe
Confidence 11223356799999999999975432 48999999999999986633 45677899999999999999
Q ss_pred EEEeccCCCCCCCCCCCCChHHhhHHHhhhCCcEEEEecCCCCCCCCcccCCCCceEEeecCCCCCceeeEEEeCCCeee
Q 006930 287 VISISIGGGDGISSPYYLDPIAIGSYGAASRGVFVSSSAGNDGPNGMSVTNLAPWIVTVGAGTIDRNFPAEVRLGDGRRL 366 (625)
Q Consensus 287 VIn~S~G~~~g~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~~~vitVga~~~~~~~~~~~~~~~~~~~ 366 (625)
|||||||... ........+..++.++.++|+++|+||||+|.....+|+..+++|+|||.+.
T Consensus 108 Vin~S~G~~~--~~~~~~~~~~~ai~~a~~~gi~vV~AaGN~g~~~~~~Pa~~~~vi~Vga~~~---------------- 169 (282)
T 3zxy_A 108 IINISGGELT--DFGEADGWLENAVSLCRQNNVLLVAAAGNNGCDCLHVPAALPAVLAVGAMDD---------------- 169 (282)
T ss_dssp EEEECCCEEE--SSSCCCHHHHHHHHHHHHTTCEEEEECCSSCSSCEEETTTSTTCEEEEEECT----------------
T ss_pred EEeccCcccc--ccccccHHHHHHHHHHhhcCceEEEecccCCCccccCccccceeEEEEEEcC----------------
Confidence 9999999763 2223345677788889999999999999999988888899999999998432
Q ss_pred eeeecccCCCCCCceeeEEecCCCCCcccccccCCCCCCCccCceEEEEecCCCchhhHHHHHHHcCceEEEEEeCCCCC
Q 006930 367 SGVSLYAGAPLSEKMYPLIYPGKSGVLSASLCMENSLDPNLVRGKIVICDRGSSPRVAKGLVVKKAGGVGMILANGISNG 446 (625)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~i~~~~~g~~~~~~~~~~~~~~g~~g~~~~~~~~~~ 446 (625)
T Consensus 170 -------------------------------------------------------------------------------- 169 (282)
T 3zxy_A 170 -------------------------------------------------------------------------------- 169 (282)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CccccCCCccCEEEeChhhHHHHHHHHHcCCCCeEEEEecceeecCcCCCcccccCCCCCCCCCCCCCCCccccCCCcEE
Q 006930 447 EGLVGDAHLLPACALGSDEGDAVKAYISSTANPTATIDFKGTILGIKPAPVVASFSARGPNGLNPEILKPDLIAPGVNIL 526 (625)
Q Consensus 447 ~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPdi~APG~~i~ 526 (625)
.+.++.||++|+. +.||||+|||.+|+
T Consensus 170 ------------------------------------------------~~~~~~~S~~~~~-----~~~~di~ApG~~i~ 196 (282)
T 3zxy_A 170 ------------------------------------------------HGHPLDFSNWGST-----YEQQGILAPGEDIL 196 (282)
T ss_dssp ------------------------------------------------TSCBCSSSCCCHH-----HHHHEEEEECSSEE
T ss_pred ------------------------------------------------CCccccccCCCCC-----ccccceeccCccee
Confidence 2367889999975 45789999999999
Q ss_pred eeecCCCCCCCCCCCcccccccccCchhhhHHHHHHHHHHHHHhC----CCCCHHHHHHHHHhccccccCCCCCCccCCC
Q 006930 527 AAWTEAVGPTGLDSDLRKTEFNILSGTSMACPHVSGAAALLKSAH----PDWSPAAIRSAMMTTASIVDNSNQPMTDEAT 602 (625)
Q Consensus 527 s~~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~----p~lt~~~vk~~L~~tA~~~~~~~~~~~~~~~ 602 (625)
++.+.+ .|..++|||||||+|||++|||+|++ |.++|+|||++|++||+++...
T Consensus 197 s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~~~~vk~~L~~tA~~~~~~--------- 254 (282)
T 3zxy_A 197 GAKPGG-------------GTERLSGTAFATPIVSGVAALLLSEQVRRGETPDPQKVRQLLLQSALPCDDD--------- 254 (282)
T ss_dssp EECTTS-------------CEEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHCBCC------------
T ss_pred eecCCC-------------ceeecCCCcccchHHHHHHHHHHHHhHhhCCCCCHHHHHHHHHhhCeeCCCC---------
Confidence 998876 89999999999999999999999874 7899999999999999987532
Q ss_pred CCCCCCCcccccccCccccCC
Q 006930 603 GNASTPYDFGAGHVNLDRAMD 623 (625)
Q Consensus 603 ~~~~~~~~~G~G~ld~~~Al~ 623 (625)
.+.....+|||+||+++||+
T Consensus 255 -~~~~~~~~G~G~ln~~~A~~ 274 (282)
T 3zxy_A 255 -APEQARRCLAGRLNVSGAFT 274 (282)
T ss_dssp -----CGGGTTCBCCHHHHHH
T ss_pred -CCCccCceeeeEeCHHHHHH
Confidence 22344589999999999874
No 19
>2z30_A TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 3a3o_A 3a3n_A 2zrq_A 2z57_A 2z56_A 2z58_A 3a3p_A 2z2x_A* 2z2y_A
Probab=100.00 E-value=6.1e-52 Score=427.56 Aligned_cols=271 Identities=30% Similarity=0.414 Sum_probs=222.0
Q ss_pred cccccc--cCCCccCCCCCC--ccEEEEcccccCCCCCCCCCCCCCCCCCCccccccccccccccCCCcceeeeeeeccc
Q 006930 116 FLGLRN--QQGLWSESDYGS--DVIIGVFDTGIWPERRSFSDLNIGSIPSKWKGVCQVGVKFTAKNCNKKIIGARFFSKG 191 (625)
Q Consensus 116 ~~~~~~--~~~~~~~~~tG~--gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~ 191 (625)
.|++.. ++.+|+.+ +|+ ||+|+|||||||++||+|.+ ++....+|..+
T Consensus 9 ~W~l~~i~~~~aw~~~-~G~~~gv~VaViDtGid~~Hp~l~~---------------------------~~~~~~~~~~~ 60 (320)
T 2z30_A 9 PWGIERVKAPSVWSIT-DGSVSVIQVAVLDTGVDYDHPDLAA---------------------------NIAWCVSTLRG 60 (320)
T ss_dssp CHHHHHTTCGGGTTTC-CSCCTTCEEEEEESCBCTTCTTTGG---------------------------GEEEEEECGGG
T ss_pred CCChhhcChHHHHHhc-CCCcCCeEEEEECCCCCCCChhHhc---------------------------ccccCccccCC
Confidence 455543 46789988 899 99999999999999999974 23333444332
Q ss_pred ccccCCCCCCCCCCCCCccccCCCCCCCCCccccchhhccccCCCCCcccccCccccccCCccceeeeeeccCCCCCChh
Q 006930 192 HEAAGGSAGPIGGGINETVEFMSPRDADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKARLAVYKVCWKNAGCFDS 271 (625)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~~~~~~~ 271 (625)
... ....+..|..+|||||||||+|.. ++. | +.||||+|+|+.+|+++..+.+..+
T Consensus 61 ~~~---------------~~~~~~~d~~gHGT~vAgiia~~~-n~~---g-----~~GvAp~a~l~~~~v~~~~g~~~~~ 116 (320)
T 2z30_A 61 KVS---------------TKLRDCADQNGHGTHVIGTIAALN-NDI---G-----VVGVAPGVQIYSVRVLDARGSGSYS 116 (320)
T ss_dssp CCB---------------CCHHHHBCSSSHHHHHHHHHHCCS-SSB---S-----CCCSSTTCEEEEEECSCTTSEEEHH
T ss_pred ccC---------------CCCCCCCCCCCCHHHHHHHHHccc-CCC---c-----eEeeCCCCEEEEEEeeCCCCCccHH
Confidence 100 001123578899999999999973 221 2 3899999999999999886667888
Q ss_pred hHHHHHHHHHHc--------------------CCCEEEeccCCCCCCCCCCCCChHHhhHHHhhhCCcEEEEecCCCCCC
Q 006930 272 DILAAFDAAVND--------------------GVDVISISIGGGDGISSPYYLDPIAIGSYGAASRGVFVSSSAGNDGPN 331 (625)
Q Consensus 272 ~i~~ai~~a~~~--------------------~~~VIn~S~G~~~g~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~g~~ 331 (625)
+++++|+|++++ +++|||||||... ....+..++.++.++|++||+||||+|..
T Consensus 117 ~i~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~Vin~S~G~~~------~~~~~~~ai~~a~~~gi~vV~AAGN~g~~ 190 (320)
T 2z30_A 117 DIAIGIEQAILGPDGVADKDGDGIIAGDPDDDAAEVISMSLGGPA------DDSYLYDMIIQAYNAGIVIVAASGNEGAP 190 (320)
T ss_dssp HHHHHHHHHHHTTTTCSCTTSSSCCTTCTTSCCCSEEEECEEBSC------CCHHHHHHHHHHHHTTCEEEEECCSSCCS
T ss_pred HHHHHHHHHHhCcccccccccccccccccccCCceEEEecCCCCC------CCHHHHHHHHHHHHCCCEEEEeCCCCCCC
Confidence 999999999987 9999999999873 24567778888999999999999999988
Q ss_pred CCcccCCCCceEEeecCCCCCceeeEEEeCCCeeeeeeecccCCCCCCceeeEEecCCCCCcccccccCCCCCCCccCce
Q 006930 332 GMSVTNLAPWIVTVGAGTIDRNFPAEVRLGDGRRLSGVSLYAGAPLSEKMYPLIYPGKSGVLSASLCMENSLDPNLVRGK 411 (625)
Q Consensus 332 ~~~~~~~~~~vitVga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~ 411 (625)
...+|+..+++|+||+++.
T Consensus 191 ~~~~Pa~~~~vi~Vga~~~------------------------------------------------------------- 209 (320)
T 2z30_A 191 SPSYPAAYPEVIAVGAIDS------------------------------------------------------------- 209 (320)
T ss_dssp SCCBTTTSTTEEEEEEECT-------------------------------------------------------------
T ss_pred CCCCcccCCCeEEEEeeCC-------------------------------------------------------------
Confidence 8888999999999998432
Q ss_pred EEEEecCCCchhhHHHHHHHcCceEEEEEeCCCCCCccccCCCccCEEEeChhhHHHHHHHHHcCCCCeEEEEecceeec
Q 006930 412 IVICDRGSSPRVAKGLVVKKAGGVGMILANGISNGEGLVGDAHLLPACALGSDEGDAVKAYISSTANPTATIDFKGTILG 491 (625)
Q Consensus 412 i~~~~~g~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 491 (625)
T Consensus 210 -------------------------------------------------------------------------------- 209 (320)
T 2z30_A 210 -------------------------------------------------------------------------------- 209 (320)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CcCCCcccccCCCCCCCCCCCCCCCccccCCCcEEeeecCCCCCCCCCCCcccccccccCchhhhHHHHHHHHHHHHHhC
Q 006930 492 IKPAPVVASFSARGPNGLNPEILKPDLIAPGVNILAAWTEAVGPTGLDSDLRKTEFNILSGTSMACPHVSGAAALLKSAH 571 (625)
Q Consensus 492 ~~~~~~~a~fSs~Gp~~~~~~~~KPdi~APG~~i~s~~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~ 571 (625)
.+.+++||++|| +|+|||.+|+++++.+ .|..++|||||||+|||++|||+|++
T Consensus 210 ---~~~~~~~S~~g~----------~v~APG~~i~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~ 263 (320)
T 2z30_A 210 ---NDNIASFSNRQP----------EVSAPGVDILSTYPDD-------------SYETLMGTAMATPHVSGVVALIQAAY 263 (320)
T ss_dssp ---TSCBCTTSCSSC----------SEEEECSSEEEEETTT-------------EEEEECSHHHHHHHHHHHHHHHHHHH
T ss_pred ---CCCcCcccCCCC----------CEEeCCCCeEEeccCC-------------CeEeccCHHHHHHHHHHHHHHHHHhc
Confidence 236789999997 7899999999998765 89999999999999999999999999
Q ss_pred -------------CCCCHHHHHHHHHhccccccCCCCCCccCCCCCCCCCCcccccccCccccCC
Q 006930 572 -------------PDWSPAAIRSAMMTTASIVDNSNQPMTDEATGNASTPYDFGAGHVNLDRAMD 623 (625)
Q Consensus 572 -------------p~lt~~~vk~~L~~tA~~~~~~~~~~~~~~~~~~~~~~~~G~G~ld~~~Al~ 623 (625)
|.|++.+||++|++||+++... .++..||||+||+++||+
T Consensus 264 ~~~~~~~~~~~~~p~lt~~~v~~~L~~ta~~~~~~------------g~~~~~G~G~vd~~~A~~ 316 (320)
T 2z30_A 264 YQKYGKILPVGTFDDISKNTVRGILHITADDLGPT------------GWDADYGYGVVRAALAVQ 316 (320)
T ss_dssp HHHHSSCCCCCCTTCCSTTSHHHHHHHHSBCCSSS------------SSBTTTBTCBCCHHHHHH
T ss_pred hhhcccccccccCCCCCHHHHHHHHHhhCccCCCC------------CCCCCcCCceeCHHHHHH
Confidence 9999999999999999987432 345689999999999874
No 20
>4h6w_A N-terminal cyanobactin protease; hydrolase; 2.45A {Planktothrix agardhii nies-596}
Probab=100.00 E-value=5.4e-52 Score=426.52 Aligned_cols=274 Identities=26% Similarity=0.327 Sum_probs=219.4
Q ss_pred ccCCCccCCCCCCccEEEEcccccCCCCCCCCCCCCCCCCCCccccccccccccccCCCcceeeeeeecccccccCCCCC
Q 006930 121 NQQGLWSESDYGSDVIIGVFDTGIWPERRSFSDLNIGSIPSKWKGVCQVGVKFTAKNCNKKIIGARFFSKGHEAAGGSAG 200 (625)
Q Consensus 121 ~~~~~~~~~~tG~gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 200 (625)
.++++|+.+..++||+|||||||||++||+|.++ .+....++..+
T Consensus 9 G~~~aW~~~~G~~gV~VaViDtGid~~Hpdl~g~--------------------------~~~~~~~~~~~--------- 53 (306)
T 4h6w_A 9 GLKKLWSETRGDPKICVAVLDGIVDQNHPCFIGA--------------------------DLTRLPSLVSG--------- 53 (306)
T ss_dssp THHHHHHHCSCCTTCEEEEESSCCCTTSGGGTTC--------------------------EEEECC--------------
T ss_pred CHHHHHhhhCCCCCCEEEEEcCCCCCCChhHcCC--------------------------cccCCCcccCC---------
Confidence 3456899988779999999999999999999753 12222222221
Q ss_pred CCCCCCCCccccCCCCCCCCCccccchhhccccCCCCCcccccCccccccCCccceeeeeeccCC-CCCChhhHHHHHHH
Q 006930 201 PIGGGINETVEFMSPRDADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKARLAVYKVCWKN-AGCFDSDILAAFDA 279 (625)
Q Consensus 201 ~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~-~~~~~~~i~~ai~~ 279 (625)
+.....|..+|||||||||+|+.++ .+.||||+|+|+.+|++.+. ......+++++|+|
T Consensus 54 ----------~~~~~~d~~gHGThVAGiiag~~~~----------~~~GVAp~a~l~~~kv~~~~~~~~~~~~i~~ai~~ 113 (306)
T 4h6w_A 54 ----------EANANGSMSTHGTHVASIIFGQHDS----------PVTGIAPQCRGLIVPVFADESLKLSQLDLSRAIEQ 113 (306)
T ss_dssp ---------------CCCCHHHHHHHHHHHCCTTS----------SSCCSSTTSEEEECCCCCSSSCCCCHHHHHHHHHH
T ss_pred ----------CCCCCCCCCCchHHHHHHHHccccC----------CcceeccccccceeeccccccccchHHHHHHHHHH
Confidence 0123346789999999999997533 14899999999999998663 34667789999999
Q ss_pred HHHcCCCEEEeccCCCCCCCCCCCCChHHhhHHHhhhCCcEEEEecCCCCCCCCcccCCCCceEEeecCCCCCceeeEEE
Q 006930 280 AVNDGVDVISISIGGGDGISSPYYLDPIAIGSYGAASRGVFVSSSAGNDGPNGMSVTNLAPWIVTVGAGTIDRNFPAEVR 359 (625)
Q Consensus 280 a~~~~~~VIn~S~G~~~g~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~~~vitVga~~~~~~~~~~~~ 359 (625)
+++++++|||+|||... ........+..++.++.++|+++|+||||++.....+|+..+++|+||+++.
T Consensus 114 a~~~g~~vi~~s~g~~~--~~~~~~~~~~~ai~~a~~~gi~vvaaagn~g~~~~~~Pa~~~~vi~Vga~~~--------- 182 (306)
T 4h6w_A 114 AVNNGANIINVSAGQLT--DAGEADTWLEKAIQLCQENNVLLIAATGNDGCECLHVPASLPTVLAVGAMDD--------- 182 (306)
T ss_dssp HHHTTCSEEEECCCEEE--SSSCCCHHHHHHHHHHHHTTCEEEEECCSSSSBCEEETTTSTTCEEEEEECT---------
T ss_pred hhcccceeeeccccccc--cCCCccHHHHHHHHHHHHcCCeEEEecCCCCcccccccccCCcceEEEEecC---------
Confidence 99999999999999763 2233456677888899999999999999999988888899999999998432
Q ss_pred eCCCeeeeeeecccCCCCCCceeeEEecCCCCCcccccccCCCCCCCccCceEEEEecCCCchhhHHHHHHHcCceEEEE
Q 006930 360 LGDGRRLSGVSLYAGAPLSEKMYPLIYPGKSGVLSASLCMENSLDPNLVRGKIVICDRGSSPRVAKGLVVKKAGGVGMIL 439 (625)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~i~~~~~g~~~~~~~~~~~~~~g~~g~~~ 439 (625)
T Consensus 183 -------------------------------------------------------------------------------- 182 (306)
T 4h6w_A 183 -------------------------------------------------------------------------------- 182 (306)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EeCCCCCCccccCCCccCEEEeChhhHHHHHHHHHcCCCCeEEEEecceeecCcCCCcccccCCCCCCCCCCCCCCCccc
Q 006930 440 ANGISNGEGLVGDAHLLPACALGSDEGDAVKAYISSTANPTATIDFKGTILGIKPAPVVASFSARGPNGLNPEILKPDLI 519 (625)
Q Consensus 440 ~~~~~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPdi~ 519 (625)
.+.+++||++|+. ..||||+
T Consensus 183 -------------------------------------------------------~~~~~~~s~~g~~-----~~~~di~ 202 (306)
T 4h6w_A 183 -------------------------------------------------------QGKPVDFSNWGDA-----YQKQGIL 202 (306)
T ss_dssp -------------------------------------------------------TSCBCSSSCBCHH-----HHHHEEE
T ss_pred -------------------------------------------------------CCCccccccccCC-----cCcceee
Confidence 1357889999974 4578999
Q ss_pred cCCCcEEeeecCCCCCCCCCCCcccccccccCchhhhHHHHHHHHHHHHHh----CCCCCHHHHHHHHHhccccccCCCC
Q 006930 520 APGVNILAAWTEAVGPTGLDSDLRKTEFNILSGTSMACPHVSGAAALLKSA----HPDWSPAAIRSAMMTTASIVDNSNQ 595 (625)
Q Consensus 520 APG~~i~s~~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~----~p~lt~~~vk~~L~~tA~~~~~~~~ 595 (625)
|||.+|+++.+.+ .|..++|||||||||||++|||++. +|.|+|+|||++|++||+++...+.
T Consensus 203 APG~~i~s~~~~~-------------~~~~~sGTS~AaP~VaG~~All~s~~~~~~p~~t~~~v~~~L~~tA~~~~~~~~ 269 (306)
T 4h6w_A 203 APGKDILGAKPNG-------------GTIRLSGTSFATPIVSGVAALLLSLQIKRGEKPDPQKVKNALLASATPCNPKDT 269 (306)
T ss_dssp EECSSEEEECTTS-------------CEEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHTCBCCCTTTC
T ss_pred cCCcCcccccCCC-------------ceeccCCCcchhHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHhhCccCCCCCC
Confidence 9999999998876 8999999999999999999999864 6999999999999999999864332
Q ss_pred CCccCCCCCCCCCCcccccccCccccCC
Q 006930 596 PMTDEATGNASTPYDFGAGHVNLDRAMD 623 (625)
Q Consensus 596 ~~~~~~~~~~~~~~~~G~G~ld~~~Al~ 623 (625)
.....||||+||+++||+
T Consensus 270 ----------~~~~~~G~G~ln~~~Av~ 287 (306)
T 4h6w_A 270 ----------DDQSRCLMGKLNILDAIE 287 (306)
T ss_dssp ----------SCGGGGTTCBCCHHHHHH
T ss_pred ----------CCCCCcceeecCHHHHHH
Confidence 223479999999999875
No 21
>3lpc_A APRB2; protease, subtilase, virulence factor, hydrolase; 1.70A {Dichelobacter nodosus} PDB: 3lpa_A 3lpd_A 3ti9_A 3ti7_A
Probab=100.00 E-value=1.8e-50 Score=421.32 Aligned_cols=290 Identities=28% Similarity=0.389 Sum_probs=222.0
Q ss_pred ccCCCccCCCCCCccEEEEcccccCCCCCCCCCCCCCCCCCCccccccccccccccCCCcceeeeeeeccccc----ccC
Q 006930 121 NQQGLWSESDYGSDVIIGVFDTGIWPERRSFSDLNIGSIPSKWKGVCQVGVKFTAKNCNKKIIGARFFSKGHE----AAG 196 (625)
Q Consensus 121 ~~~~~~~~~~tG~gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~----~~~ 196 (625)
++..+|+.+++|+||+|+||||||+ +||+|.++-.. .++|..... ...
T Consensus 20 ~~~~aw~~g~~G~gV~VaViDtGi~-~hp~l~~~~~~---------------------------~~~~~~~~~~~~d~~~ 71 (340)
T 3lpc_A 20 KADKVWDMGFTGQNVVVAVVDTGIL-HHRDLNANVLP---------------------------GYDFISNSQISLDGDG 71 (340)
T ss_dssp CHHHHHHHTCSCTTCEEEEEESCBC-CCTTTGGGBCC---------------------------CEECCCCHHHHCSSSS
T ss_pred CHHHHHHhcCCCCCeEEEEEcCCCC-CChhhhccccc---------------------------CccccCCccccccCCC
Confidence 4567899999999999999999998 99999753211 111111000 000
Q ss_pred CCCCCCCCC--------CCCccccCCCCCCCCCccccchhhccccCCCCCcccccCccccccCCccceeeeeeccCCCCC
Q 006930 197 GSAGPIGGG--------INETVEFMSPRDADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKARLAVYKVCWKNAGC 268 (625)
Q Consensus 197 ~~~~~~~~~--------~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~~~~ 268 (625)
.+..|.+.. ...+.+.....|..||||||||||+|...+..+ +.||||+|+|+.+|+++.. +.
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~gHGT~vAgiia~~~~~~~g--------~~GvAp~a~l~~~~v~~~~-~~ 142 (340)
T 3lpc_A 72 RDADPFDEGDWFDNWACGGRPDPRKERSDSSWHGSHVAGTIAAVTNNRIG--------VAGVAYGAKVVPVRALGRC-GG 142 (340)
T ss_dssp SBSCCBCCCCCBCTTTTSCTTCGGGSCBCCCCHHHHHHHHHHCCCSSSSS--------CCCTTTTSEEEEEECCBTT-BC
T ss_pred ccCCccccccccccccccCCCCcccCCCCCCCCHHHHHHHHHccCCCCCc--------ceeecCCCEEEEEEEecCC-CC
Confidence 000000000 011223344678899999999999998766533 2899999999999999884 47
Q ss_pred ChhhHHHHHHHHHH----------cCCCEEEeccCCCCCCCCCCCCChHHhhHHHhhhCCcEEEEecCCCCCCCC-cccC
Q 006930 269 FDSDILAAFDAAVN----------DGVDVISISIGGGDGISSPYYLDPIAIGSYGAASRGVFVSSSAGNDGPNGM-SVTN 337 (625)
Q Consensus 269 ~~~~i~~ai~~a~~----------~~~~VIn~S~G~~~g~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~g~~~~-~~~~ 337 (625)
..++++++|+|+++ .+++|||||||... .....+..++.++.++|++||+||||++.... .+++
T Consensus 143 ~~~~~~~ai~~a~~~~~~~~~~~~~~~~Vin~S~G~~~-----~~~~~~~~~~~~a~~~gi~vV~AAGN~g~~~~~~~Pa 217 (340)
T 3lpc_A 143 YDSDISDGLYWAAGGRIAGIPENRNPAKVINMSLGSDG-----QCSYNAQTMIDRATRLGALVVVAAGNENQNASNTWPT 217 (340)
T ss_dssp CHHHHHHHHHHHHTCCCTTSCCCSSCCSEEEECCCEES-----CCCHHHHHHHHHHHHHTCEEEEECCSSSSBGGGEETT
T ss_pred cHHHHHHHHHHHhcccccccccccCCCeEEEeCcCCCC-----CcchhHHHHHHHHHhCCcEEEEeCCCCCCCCCCcCCc
Confidence 88899999999998 89999999999762 23455777778889999999999999997754 4678
Q ss_pred CCCceEEeecCCCCCceeeEEEeCCCeeeeeeecccCCCCCCceeeEEecCCCCCcccccccCCCCCCCccCceEEEEec
Q 006930 338 LAPWIVTVGAGTIDRNFPAEVRLGDGRRLSGVSLYAGAPLSEKMYPLIYPGKSGVLSASLCMENSLDPNLVRGKIVICDR 417 (625)
Q Consensus 338 ~~~~vitVga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~i~~~~~ 417 (625)
..+++|+||+++.
T Consensus 218 ~~~~vi~Vga~~~------------------------------------------------------------------- 230 (340)
T 3lpc_A 218 SCNNVLSVGATTS------------------------------------------------------------------- 230 (340)
T ss_dssp TSSSCEEEEEECT-------------------------------------------------------------------
T ss_pred cCCceEEEecCCC-------------------------------------------------------------------
Confidence 8899999998432
Q ss_pred CCCchhhHHHHHHHcCceEEEEEeCCCCCCccccCCCccCEEEeChhhHHHHHHHHHcCCCCeEEEEecceeecCcCCCc
Q 006930 418 GSSPRVAKGLVVKKAGGVGMILANGISNGEGLVGDAHLLPACALGSDEGDAVKAYISSTANPTATIDFKGTILGIKPAPV 497 (625)
Q Consensus 418 g~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 497 (625)
.+.
T Consensus 231 -----------------------------------------------------------------------------~~~ 233 (340)
T 3lpc_A 231 -----------------------------------------------------------------------------RGI 233 (340)
T ss_dssp -----------------------------------------------------------------------------TSS
T ss_pred -----------------------------------------------------------------------------CCC
Confidence 236
Q ss_pred ccccCCCCCCCCCCCCCCCccccCCCcEEeeecCCCCCCCCCCCcccccccccCchhhhHHHHHHHHHHHHHh-C---CC
Q 006930 498 VASFSARGPNGLNPEILKPDLIAPGVNILAAWTEAVGPTGLDSDLRKTEFNILSGTSMACPHVSGAAALLKSA-H---PD 573 (625)
Q Consensus 498 ~a~fSs~Gp~~~~~~~~KPdi~APG~~i~s~~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~-~---p~ 573 (625)
++.||++||. |||+|||.+|+++.+.+... .....|..++|||||||+|||++|||+|+ + |.
T Consensus 234 ~~~~S~~g~~--------~di~ApG~~i~s~~~~~~~~------~~~~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~p~ 299 (340)
T 3lpc_A 234 RASFSNYGVD--------VDLAAPGQDILSTVDSGTRR------PVSDAYSFMAGTSMATPHVSGVAALVISAANSVNKN 299 (340)
T ss_dssp BCTTCCBSTT--------CCEEEECSSEEEEEESCSSS------CCSEEEEEECSHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred cCCCCCCCCC--------ceEEecCCCeecccCCCCcC------CCCCcceecccHhHHHHHHHHHHHHHHHhhhhhCCC
Confidence 7899999985 49999999999998765321 11236999999999999999999999998 5 99
Q ss_pred CCHHHHHHHHHhccccccCCCCCCccCCCCCCCCCCcccccccCccccCC
Q 006930 574 WSPAAIRSAMMTTASIVDNSNQPMTDEATGNASTPYDFGAGHVNLDRAMD 623 (625)
Q Consensus 574 lt~~~vk~~L~~tA~~~~~~~~~~~~~~~~~~~~~~~~G~G~ld~~~Al~ 623 (625)
|++++||++|++||+++.. .++..+|||+||+++||+
T Consensus 300 lt~~~v~~~L~~tA~~~~~-------------~~~~~~G~G~vd~~~Av~ 336 (340)
T 3lpc_A 300 LTPAELKDVLVSTTSPFNG-------------RLDRALGSGIVDAEAAVN 336 (340)
T ss_dssp CCHHHHHHHHHHTCBCCSS-------------CCSSCCCSSBCCHHHHHH
T ss_pred CCHHHHHHHHHhcCCcCCC-------------CCCCCcccceecHHHHHH
Confidence 9999999999999998742 244589999999999975
No 22
>2iy9_A SUBA; toxin, shiga, plasmid; 1.8A {Escherichia coli}
Probab=100.00 E-value=7.8e-51 Score=424.80 Aligned_cols=276 Identities=21% Similarity=0.166 Sum_probs=218.1
Q ss_pred ccccc--ccCCCccCCCCCC--ccEEEEcccccCCCCCCCCCCCCCCCCCCccccccccccccccCCCcceeeeeeeccc
Q 006930 116 FLGLR--NQQGLWSESDYGS--DVIIGVFDTGIWPERRSFSDLNIGSIPSKWKGVCQVGVKFTAKNCNKKIIGARFFSKG 191 (625)
Q Consensus 116 ~~~~~--~~~~~~~~~~tG~--gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~ 191 (625)
.|++. +++.+|+. .+|+ ||+||||||||| +||+|.++ +...++|...
T Consensus 24 ~W~l~~i~~~~aw~~-~~G~~~gv~VaViDsGid-~Hp~l~~~---------------------------~~~~~~~~~~ 74 (347)
T 2iy9_A 24 PWYFDAIGLTETTMS-LTDKNTPVVVSVVDSGVA-FIGGLSDS---------------------------EFAKFSFTQD 74 (347)
T ss_dssp CHHHHHHTCCHHHHH-TSCTTSCCEEEEEESCCC-CCGGGTTC---------------------------EEEEEECBTT
T ss_pred CcchhhCChHHHHHH-hcCCCCCCEEEEEcCCCc-CChhhhcC---------------------------cccCCcccCC
Confidence 34443 34568888 8899 999999999999 99999742 3334444431
Q ss_pred ccccCCCCCCCCCCCCCccccCCCCCCCCCccccchhhccccCCCCCcccccCccccccCCccceeeeeeccCCCCCChh
Q 006930 192 HEAAGGSAGPIGGGINETVEFMSPRDADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKARLAVYKVCWKNAGCFDS 271 (625)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~~~~~~~ 271 (625)
+. +.+.....|..+|||||||||+|. .| +.||||+|+|+.+|++++.+. .
T Consensus 75 -----~~----------~~~~~~~~d~~gHGT~vAgiia~~-------~g-----~~GvAp~a~l~~~~v~~~~~~---~ 124 (347)
T 2iy9_A 75 -----GS----------PFPVKKSEALYIHGTAMASLIASR-------YG-----IYGVYPHALISSRRVIPDGVQ---D 124 (347)
T ss_dssp -----CC----------SSCCSSSHHHHHHHHHHHHHHHCS-------SS-----SCCSSTTCEEEEEECCSSBCT---T
T ss_pred -----CC----------CCCCCCCCCCCCcHHHHHHHHhcc-------cC-----CcccCCCCEEEEEEEecCCCH---H
Confidence 00 011124567889999999999997 12 289999999999999987332 2
Q ss_pred hHHHHHHHHHHc------CCCEEEeccCCCCCCCCCCCCChHHhhHHHhhhCCcEEEEecCCCCCC-------CCcccCC
Q 006930 272 DILAAFDAAVND------GVDVISISIGGGDGISSPYYLDPIAIGSYGAASRGVFVSSSAGNDGPN-------GMSVTNL 338 (625)
Q Consensus 272 ~i~~ai~~a~~~------~~~VIn~S~G~~~g~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~g~~-------~~~~~~~ 338 (625)
++++||+|++++ +++|||||||.. ........+..++.++.++|++||+||||+|.+ ...+|+.
T Consensus 125 ~~~~ai~~a~~~~~~~~~~~~Vin~S~G~~---~~~~~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~~~~~~~~Pa~ 201 (347)
T 2iy9_A 125 SWIRAIESIMSNVFLAPGEEKIINISGGQK---GVASASVWTELLSRMGRNNDRLIVAAVGNDGADIRKLSAQQRIWPAA 201 (347)
T ss_dssp HHHHHHHHHHTCTTSCTTEEEEEEESSCBC---CC-CCHHHHHHHHHHHHHTSCEEEEECCBSCCBTTTSCTTTSCBTTT
T ss_pred HHHHHHHHHHhhhhcccCCceEEEeccccC---CCCCcCHHHHHHHHHHHhCCeEEEEeCCCCCCCCCCcccccccCCCc
Confidence 899999999999 999999999977 223356678888889999999999999999985 4567777
Q ss_pred CC----------ceEEeecCCC--CCceeeEEEeCCCeeeeeeecccCCCCCCceeeEEecCCCCCcccccccCCCCCCC
Q 006930 339 AP----------WIVTVGAGTI--DRNFPAEVRLGDGRRLSGVSLYAGAPLSEKMYPLIYPGKSGVLSASLCMENSLDPN 406 (625)
Q Consensus 339 ~~----------~vitVga~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~ 406 (625)
.+ ++|+||+++. +....
T Consensus 202 ~~~~~~~~~~~~~vi~Vga~~~~~~g~~~--------------------------------------------------- 230 (347)
T 2iy9_A 202 YHPVSSVNKKQDPVIRVAALAQYRKGETP--------------------------------------------------- 230 (347)
T ss_dssp CCCCSHHHHHTCCEEEEEEECCCCTTSCC---------------------------------------------------
T ss_pred CccccccccccCCEEEEEEcccCCCCcee---------------------------------------------------
Confidence 88 9999998544 11100
Q ss_pred ccCceEEEEecCCCchhhHHHHHHHcCceEEEEEeCCCCCCccccCCCccCEEEeChhhHHHHHHHHHcCCCCeEEEEec
Q 006930 407 LVRGKIVICDRGSSPRVAKGLVVKKAGGVGMILANGISNGEGLVGDAHLLPACALGSDEGDAVKAYISSTANPTATIDFK 486 (625)
Q Consensus 407 ~~~g~i~~~~~g~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~~~~~ 486 (625)
T Consensus 231 -------------------------------------------------------------------------------- 230 (347)
T 2iy9_A 231 -------------------------------------------------------------------------------- 230 (347)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceeecCcCCCcccccCCCCCCCCCCCCCCCccccCCCcEEeeecCCCCCCCCCCCcccccccccCchhhhHHHHHHHHHH
Q 006930 487 GTILGIKPAPVVASFSARGPNGLNPEILKPDLIAPGVNILAAWTEAVGPTGLDSDLRKTEFNILSGTSMACPHVSGAAAL 566 (625)
Q Consensus 487 ~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPdi~APG~~i~s~~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aAL 566 (625)
...+.+++||++||+ ||||+|||++|+++.+.+ .|..++|||||||+|||++||
T Consensus 231 ------~~~~~~~~fS~~G~~-------~~di~APG~~i~s~~~~~-------------~~~~~sGTS~AaP~VaG~aAl 284 (347)
T 2iy9_A 231 ------VLHGGGITGSRFGNN-------WVDIAAPGQNITFLRPDA-------------KTGTGSGTSEATAIVSGVLAA 284 (347)
T ss_dssp ------CBCCCSSSCBCBCTT-------TCSEEEECSSEEEECTTS-------------CEEEECSHHHHHHHHHHHHHH
T ss_pred ------cccCCCCCCCCCCCC-------CCEEEeCCCCeEeecCCC-------------CeEeccchHHHHHHHHHHHHH
Confidence 001245699999995 469999999999999865 799999999999999999999
Q ss_pred HHHhCCCCCHHHHHHHHHhccccccCCCCCCccCCCCCCCCCCcccccccCccccCC
Q 006930 567 LKSAHPDWSPAAIRSAMMTTASIVDNSNQPMTDEATGNASTPYDFGAGHVNLDRAMD 623 (625)
Q Consensus 567 l~~~~p~lt~~~vk~~L~~tA~~~~~~~~~~~~~~~~~~~~~~~~G~G~ld~~~Al~ 623 (625)
|+|++|+|+++|||++|++||+++...+ +..+|||+||+++||+
T Consensus 285 l~~~~p~lt~~~v~~~L~~tA~~~~~~~-------------~~~~G~G~ld~~~A~~ 328 (347)
T 2iy9_A 285 MTSCNPRATATELKRTLLESADKYPSLV-------------DKVTEGRVLNAEKAIS 328 (347)
T ss_dssp HHHHCTTSCHHHHHHHHHHHSEECGGGT-------------TTSGGGEECCHHHHHH
T ss_pred HHHhCCCCCHHHHHHHHHHhCccCCCCC-------------CccccCCEecHHHHHH
Confidence 9999999999999999999999876422 2489999999999874
No 23
>1wmd_A Protease; alpha-beta hydrolase fold, jelly-roll beta-barrel, hydrolase; 1.30A {Bacillus SP} SCOP: b.18.1.20 c.41.1.1 PDB: 1wme_A 1wmf_A
Probab=100.00 E-value=2.7e-50 Score=432.95 Aligned_cols=291 Identities=28% Similarity=0.376 Sum_probs=221.8
Q ss_pred cCCCcc-CCCCCCccEEEEcccccCC------CCCCCCCCCCCCCCCCccccccccccccccCCCcceeeeeeecccccc
Q 006930 122 QQGLWS-ESDYGSDVIIGVFDTGIWP------ERRSFSDLNIGSIPSKWKGVCQVGVKFTAKNCNKKIIGARFFSKGHEA 194 (625)
Q Consensus 122 ~~~~~~-~~~tG~gv~VaVIDtGid~------~Hp~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~ 194 (625)
++.+|+ .+++|+||+|||||||||. .||+|.+ ++...++|...
T Consensus 10 ~~~~~~~~g~~G~gv~VaViDtGvd~~~~~~~~hp~l~~---------------------------~i~~~~~~~~~--- 59 (434)
T 1wmd_A 10 ADVAQSSYGLYGQGQIVAVADTGLDTGRNDSSMHEAFRG---------------------------KITALYALGRT--- 59 (434)
T ss_dssp HHHHHHHHCCSCTTCEEEEEESCCTTSCSSTTSCTTTTT---------------------------CEEEEEETTTT---
T ss_pred chhhhhccCCCCcccEEEEEecCcCCCCCCcccCcccCC---------------------------CEeeeccccCC---
Confidence 456787 7999999999999999999 7999964 23333333221
Q ss_pred cCCCCCCCCCCCCCccccCCCCCCCCCccccchhhccccCCCCCcccccCccccccCCccceeeeeeccCCCCC--Chhh
Q 006930 195 AGGSAGPIGGGINETVEFMSPRDADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKARLAVYKVCWKNAGC--FDSD 272 (625)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~~~~--~~~~ 272 (625)
..+.|..||||||||||+|++.. +.||||+|+|+.+|+++..+.. ...+
T Consensus 60 ------------------~~~~d~~gHGT~VAgiiag~g~~-----------~~GvAp~a~l~~~~v~~~~g~~~~~~~~ 110 (434)
T 1wmd_A 60 ------------------NNANDTNGHGTHVAGSVLGNGST-----------NKGMAPQANLVFQSIMDSGGGLGGLPSN 110 (434)
T ss_dssp ------------------TCCCCSSSHHHHHHHHHHCCSSS-----------SCCSSTTSEEEEEECCCTTSSCTTSCSS
T ss_pred ------------------CCCCCCCCcHHHHHHHHHcCCCC-----------ceeeCCCCEEEEEEeecCCCccccccHH
Confidence 24567899999999999986421 3799999999999999874433 4568
Q ss_pred HHHHHHHHHHcCCCEEEeccCCCCCCCCCCCCChHHhhHHHh-hhCCcEEEEecCCCCCCC--CcccCCCCceEEeecCC
Q 006930 273 ILAAFDAAVNDGVDVISISIGGGDGISSPYYLDPIAIGSYGA-ASRGVFVSSSAGNDGPNG--MSVTNLAPWIVTVGAGT 349 (625)
Q Consensus 273 i~~ai~~a~~~~~~VIn~S~G~~~g~~~~~~~~~~~~~~~~a-~~~Gi~vV~AAGN~g~~~--~~~~~~~~~vitVga~~ 349 (625)
+.++|+++++++++|||||||... ... ......++.++ .++|++||+||||+|... ...|+.++++|+|||++
T Consensus 111 ~~~ai~~a~~~g~~Vin~S~G~~~---~~~-~~~~~~~id~~~~~~gvlvV~AAGN~g~~~~~~~~Pa~~~~vitVga~~ 186 (434)
T 1wmd_A 111 LQTLFSQAYSAGARIHTNSWGAAV---NGA-YTTDSRNVDDYVRKNDMTILFAAGNEGPNGGTISAPGTAKNAITVGATE 186 (434)
T ss_dssp HHHHHHHHHHTTCSEEEECCCBCC---TTC-CCHHHHHHHHHHHHSSCEEEEECCSCTTSSSCCCBSTTCSSSEEEEEEC
T ss_pred HHHHHHHHHhcCCeEEEecCCCCc---CCc-CCHHHHHHHHHHhCCCeEEEEECCCCCCCCcccCCcccCCccEEEeccc
Confidence 999999999999999999999872 212 23444455454 689999999999999764 35678889999999965
Q ss_pred CCCceeeEEEeCCCeeeeeeecccCCCCCCceeeEEecCCCCCcccccccCCCCCCCccCceEEEEecCCCchhhHHHHH
Q 006930 350 IDRNFPAEVRLGDGRRLSGVSLYAGAPLSEKMYPLIYPGKSGVLSASLCMENSLDPNLVRGKIVICDRGSSPRVAKGLVV 429 (625)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~i~~~~~g~~~~~~~~~~~ 429 (625)
..+... +
T Consensus 187 ~~~~~~--------------------------------------------------------------~----------- 193 (434)
T 1wmd_A 187 NLRPSF--------------------------------------------------------------G----------- 193 (434)
T ss_dssp CSCGGG--------------------------------------------------------------C-----------
T ss_pred ccCccc--------------------------------------------------------------C-----------
Confidence 422100 0
Q ss_pred HHcCceEEEEEeCCCCCCccccCCCccCEEEeChhhHHHHHHHHHcCCCCeEEEEecceeecCcCCCcccccCCCCCCCC
Q 006930 430 KKAGGVGMILANGISNGEGLVGDAHLLPACALGSDEGDAVKAYISSTANPTATIDFKGTILGIKPAPVVASFSARGPNGL 509 (625)
Q Consensus 430 ~~~g~~g~~~~~~~~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fSs~Gp~~~ 509 (625)
......+.+++||++||+.+
T Consensus 194 ------------------------------------------------------------~~~~~~~~~a~fS~~G~~~~ 213 (434)
T 1wmd_A 194 ------------------------------------------------------------SYADNINHVAQFSSRGPTKD 213 (434)
T ss_dssp ------------------------------------------------------------GGGSCTTSBCTTSCCCCCTT
T ss_pred ------------------------------------------------------------cccCCCCccccccCCCCCCC
Confidence 00012347899999999987
Q ss_pred CCCCCCCccccCCCcEEeeecCCCCCCCCCCCcccccccccCchhhhHHHHHHHHHHHHHhCCCC-----CHHHHHHHHH
Q 006930 510 NPEILKPDLIAPGVNILAAWTEAVGPTGLDSDLRKTEFNILSGTSMACPHVSGAAALLKSAHPDW-----SPAAIRSAMM 584 (625)
Q Consensus 510 ~~~~~KPdi~APG~~i~s~~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~p~l-----t~~~vk~~L~ 584 (625)
+++||||+|||++|+++.+........ .......|..++|||||||||||++|||+|++|++ ++++||++|+
T Consensus 214 --g~~kpdi~ApG~~i~s~~~~~~~~~~~-~~~~~~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~s~~~vk~~L~ 290 (434)
T 1wmd_A 214 --GRIKPDVMAPGTFILSARSSLAPDSSF-WANHDSKYAYMGGTSMATPIVAGNVAQLREHFVKNRGITPKPSLLKAALI 290 (434)
T ss_dssp --SCCCCCEEEECSSEEEECCTTCCGGGS-SEEEETTEEEECSHHHHHHHHHHHHHHHHHHHHHHSSSCCCHHHHHHHHH
T ss_pred --CCCCceEEcCCCCeEecCCCCCCCccc-ccCCCCceEeecchhHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHH
Confidence 999999999999999998643210000 00012378999999999999999999999998865 8999999999
Q ss_pred hccccccCCCCCCccCCCCCCCCCCcccccccCccccCC
Q 006930 585 TTASIVDNSNQPMTDEATGNASTPYDFGAGHVNLDRAMD 623 (625)
Q Consensus 585 ~tA~~~~~~~~~~~~~~~~~~~~~~~~G~G~ld~~~Al~ 623 (625)
+||+++.. .+++..||||++|+.+|++
T Consensus 291 ~tA~~~~~------------~~~~~~~G~G~vd~~~a~~ 317 (434)
T 1wmd_A 291 AGAADIGL------------GYPNGNQGWGRVTLDKSLN 317 (434)
T ss_dssp HHCBCCSS------------CSSCTTTTTCBCCHHHHHT
T ss_pred cCCcccCC------------CCCCccCCcCeEeHHHhcc
Confidence 99998531 2456799999999999885
No 24
>1sh7_A Extracellular subtilisin-like serine proteinase; cold adaptation, psychrotrophic, subtilisin-like proteinase, depentent, hydrolase; HET: PMS; 1.84A {Vibrio SP} PDB: 1s2n_A*
Probab=100.00 E-value=1.2e-49 Score=402.43 Aligned_cols=237 Identities=30% Similarity=0.411 Sum_probs=203.2
Q ss_pred CCCccCCCCCCccEEEEcccccCCCCCCCCCCCCCCCCCCccccccccccccccCCCcceeeeeeecccccccCCCCCCC
Q 006930 123 QGLWSESDYGSDVIIGVFDTGIWPERRSFSDLNIGSIPSKWKGVCQVGVKFTAKNCNKKIIGARFFSKGHEAAGGSAGPI 202 (625)
Q Consensus 123 ~~~~~~~~tG~gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 202 (625)
..+|..+++|+||+|+|||||||++||+|.++ +...++|.. .+
T Consensus 19 ~~aw~~~~~G~gv~VaViDtGvd~~h~~l~~~---------------------------~~~~~~~~~------~~---- 61 (284)
T 1sh7_A 19 DRNYNANFDGFGVTAYVIDTGVNNNHEEFGGR---------------------------SVSGYDFVD------ND---- 61 (284)
T ss_dssp CSBCCCSCCCTTCEEEEEESCCCTTCTTTTTC---------------------------EEEEEETTT------TB----
T ss_pred hhhhhcCCCCCCCEEEEEcCCCCCCChhHcCC---------------------------ccccccccC------CC----
Confidence 46899999999999999999999999999742 233333333 11
Q ss_pred CCCCCCccccCCCCCCCCCccccchhhccccCCCCCcccccCccccccCCccceeeeeeccCCCCCChhhHHHHHHHHHH
Q 006930 203 GGGINETVEFMSPRDADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKARLAVYKVCWKNAGCFDSDILAAFDAAVN 282 (625)
Q Consensus 203 ~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~~~~~~~~i~~ai~~a~~ 282 (625)
..+.|..+|||||||||+|.. .||||+|+|+.+|++++.+.+..++++++|+|+++
T Consensus 62 ----------~~~~d~~gHGT~vAgiia~~~--------------~GvAp~a~l~~~kv~~~~g~~~~~~~~~ai~~a~~ 117 (284)
T 1sh7_A 62 ----------ADSSDCNGHGTHVAGTIGGSQ--------------YGVAKNVNIVGVRVLSCSGSGTTSGVISGVDWVAQ 117 (284)
T ss_dssp ----------SCCCCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECBCTTSCBCHHHHHHHHHHHHH
T ss_pred ----------CCCCCCCCcHHHHHHHHhccc--------------CCcCCCCEEEEEEeeCCCCCcCHHHHHHHHHHHHh
Confidence 345688999999999999873 69999999999999998677888999999999998
Q ss_pred c--CCCEEEeccCCCCCCCCCCCCChHHhhHHHhhhCCcEEEEecCCCCCCCC-cccCCCCceEEeecCCCCCceeeEEE
Q 006930 283 D--GVDVISISIGGGDGISSPYYLDPIAIGSYGAASRGVFVSSSAGNDGPNGM-SVTNLAPWIVTVGAGTIDRNFPAEVR 359 (625)
Q Consensus 283 ~--~~~VIn~S~G~~~g~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~g~~~~-~~~~~~~~vitVga~~~~~~~~~~~~ 359 (625)
+ +++|||||||.. ....+..++.++.++|++||+||||++.+.. .+|+..+++|+||+++.
T Consensus 118 ~~~~~~Vin~S~G~~-------~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~--------- 181 (284)
T 1sh7_A 118 NASGPSVANMSLGGG-------QSTALDSAVQGAIQSGVSFMLAAGNSNADACNTSPARVPSGVTVGSTTS--------- 181 (284)
T ss_dssp HCCSSEEEEECCCBS-------CCHHHHHHHHHHHHTTCEEEEECCSSSSBGGGSBTTTCTTSEEEEEECT---------
T ss_pred CCCCCcEEEeCCCCC-------CCHHHHHHHHHHHHCCCEEEEECCcCCCCCCccccccCCCeEEEEEecC---------
Confidence 5 799999999987 2466788888899999999999999997653 45788899999998432
Q ss_pred eCCCeeeeeeecccCCCCCCceeeEEecCCCCCcccccccCCCCCCCccCceEEEEecCCCchhhHHHHHHHcCceEEEE
Q 006930 360 LGDGRRLSGVSLYAGAPLSEKMYPLIYPGKSGVLSASLCMENSLDPNLVRGKIVICDRGSSPRVAKGLVVKKAGGVGMIL 439 (625)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~i~~~~~g~~~~~~~~~~~~~~g~~g~~~ 439 (625)
T Consensus 182 -------------------------------------------------------------------------------- 181 (284)
T 1sh7_A 182 -------------------------------------------------------------------------------- 181 (284)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EeCCCCCCccccCCCccCEEEeChhhHHHHHHHHHcCCCCeEEEEecceeecCcCCCcccccCCCCCCCCCCCCCCCccc
Q 006930 440 ANGISNGEGLVGDAHLLPACALGSDEGDAVKAYISSTANPTATIDFKGTILGIKPAPVVASFSARGPNGLNPEILKPDLI 519 (625)
Q Consensus 440 ~~~~~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPdi~ 519 (625)
.+.+++||++||+. ||+
T Consensus 182 -------------------------------------------------------~~~~~~~S~~G~~~--------di~ 198 (284)
T 1sh7_A 182 -------------------------------------------------------SDSRSSFSNWGSCV--------DLF 198 (284)
T ss_dssp -------------------------------------------------------TSBBCTTCCBSTTC--------CEE
T ss_pred -------------------------------------------------------CCCcCcccCCCCcc--------EEE
Confidence 23678999999976 999
Q ss_pred cCCCcEEeeecCCCCCCCCCCCcccccccccCchhhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHhccccccC
Q 006930 520 APGVNILAAWTEAVGPTGLDSDLRKTEFNILSGTSMACPHVSGAAALLKSAHPDWSPAAIRSAMMTTASIVDN 592 (625)
Q Consensus 520 APG~~i~s~~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~p~lt~~~vk~~L~~tA~~~~~ 592 (625)
|||++|+++++.+ .|..++|||||||+|||++|||+|++|+|+++|||++|++||++...
T Consensus 199 ApG~~i~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~~ 258 (284)
T 1sh7_A 199 APGSQIKSAWYDG-------------GYKTISGTSMATPHVAGVAALYLQENNGLTPLQLTGLLNSRASENKV 258 (284)
T ss_dssp EECSSEEEECTTS-------------SEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEESCC
T ss_pred eccCCeEEecCCC-------------CEEEccChHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCccCCc
Confidence 9999999998765 79999999999999999999999999999999999999999998653
No 25
>2b6n_A Proteinase K; S binding, substrate specificity, proteinase K, subtilase, psychrotrophic, psychrophilic, hydrolase; 1.80A {Serratia SP}
Probab=100.00 E-value=1e-48 Score=395.10 Aligned_cols=238 Identities=31% Similarity=0.412 Sum_probs=201.8
Q ss_pred CCCccCCCCCCccEEEEcccccCCCCCCCCCCCCCCCCCCccccccccccccccCCCcceeeeeeecccccccCCCCCCC
Q 006930 123 QGLWSESDYGSDVIIGVFDTGIWPERRSFSDLNIGSIPSKWKGVCQVGVKFTAKNCNKKIIGARFFSKGHEAAGGSAGPI 202 (625)
Q Consensus 123 ~~~~~~~~tG~gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 202 (625)
..+|..+++|+||+|+|||||||++||+|.++ +...++|.. .+
T Consensus 21 ~~~~~~~~~G~gv~VaViDtGid~~Hpdl~~~---------------------------~~~~~d~~~------~~---- 63 (278)
T 2b6n_A 21 DNNYHTDYDGSGVTAFVIDTGVLNTHNEFGGR---------------------------ASSGYDFID------ND---- 63 (278)
T ss_dssp CSEEECSCCCTTCEEEEEESCCCTTCGGGTTC---------------------------EEEEEETTT------TB----
T ss_pred chhcccCCCCCCCEEEEEeCCCCCCChhHhcc---------------------------cccCeecCC------CC----
Confidence 45799999999999999999999999999742 222333332 11
Q ss_pred CCCCCCccccCCCCCCCCCccccchhhccccCCCCCcccccCccccccCCccceeeeeeccCCCCCChhhHHHHHHHHHH
Q 006930 203 GGGINETVEFMSPRDADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKARLAVYKVCWKNAGCFDSDILAAFDAAVN 282 (625)
Q Consensus 203 ~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~~~~~~~~i~~ai~~a~~ 282 (625)
.++.|..+|||||||||+|.. .||||+|+|+.+|++++.+.+..++++++|+|+++
T Consensus 64 ----------~~~~d~~gHGT~vAgiia~~~--------------~GvAp~a~i~~~~v~~~~g~~~~~~~~~ai~~a~~ 119 (278)
T 2b6n_A 64 ----------YDATDCNGHGTHVAGTIGGST--------------YGVAKNVNVVGVRVLNCSGSGSNSGVIAGINWVKN 119 (278)
T ss_dssp ----------SCCCCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHH
T ss_pred ----------CCCCCCCCcHHHHHHHHHCCC--------------cCCCCCCeEEEEEEECCCCCccHHHHHHHHHHHHh
Confidence 345688999999999999863 69999999999999998667888999999999998
Q ss_pred --cCCCEEEeccCCCCCCCCCCCCChHHhhHHHhhhCCcEEEEecCCCCCCCC-cccCCCCceEEeecCCCCCceeeEEE
Q 006930 283 --DGVDVISISIGGGDGISSPYYLDPIAIGSYGAASRGVFVSSSAGNDGPNGM-SVTNLAPWIVTVGAGTIDRNFPAEVR 359 (625)
Q Consensus 283 --~~~~VIn~S~G~~~g~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~g~~~~-~~~~~~~~vitVga~~~~~~~~~~~~ 359 (625)
.+++|||||||.. . ...+..++.++.++|++||+||||++.+.+ .+|+..+++|+||+++.
T Consensus 120 ~~~g~~Vin~S~G~~---~----~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~--------- 183 (278)
T 2b6n_A 120 NASGPAVANMSLGGG---A----SQATDDAVNAAVAAGITFVVAAGNDNSNACNYSPARAADAITVGSTTS--------- 183 (278)
T ss_dssp HCCSSEEEEECCCEE---C----CHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECT---------
T ss_pred CCCCCeEEEECCCCC---c----CHHHHHHHHHHHHCCCEEEEEeCCCCCCCCCcCcccCCCeEEEEeeCC---------
Confidence 4899999999987 2 466777888899999999999999998764 35788899999998432
Q ss_pred eCCCeeeeeeecccCCCCCCceeeEEecCCCCCcccccccCCCCCCCccCceEEEEecCCCchhhHHHHHHHcCceEEEE
Q 006930 360 LGDGRRLSGVSLYAGAPLSEKMYPLIYPGKSGVLSASLCMENSLDPNLVRGKIVICDRGSSPRVAKGLVVKKAGGVGMIL 439 (625)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~i~~~~~g~~~~~~~~~~~~~~g~~g~~~ 439 (625)
T Consensus 184 -------------------------------------------------------------------------------- 183 (278)
T 2b6n_A 184 -------------------------------------------------------------------------------- 183 (278)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EeCCCCCCccccCCCccCEEEeChhhHHHHHHHHHcCCCCeEEEEecceeecCcCCCcccccCCCCCCCCCCCCCCCccc
Q 006930 440 ANGISNGEGLVGDAHLLPACALGSDEGDAVKAYISSTANPTATIDFKGTILGIKPAPVVASFSARGPNGLNPEILKPDLI 519 (625)
Q Consensus 440 ~~~~~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPdi~ 519 (625)
.+.+++||++||.. ||+
T Consensus 184 -------------------------------------------------------~~~~~~~S~~G~~~--------di~ 200 (278)
T 2b6n_A 184 -------------------------------------------------------NDSRSSFSNYGTCL--------DIY 200 (278)
T ss_dssp -------------------------------------------------------TSBBCTTCCBSTTC--------CEE
T ss_pred -------------------------------------------------------CCCcCCcCCCCCCC--------eEE
Confidence 23678999999965 999
Q ss_pred cCCCcEEeeecCCCCCCCCCCCcccccccccCchhhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHhcccccc
Q 006930 520 APGVNILAAWTEAVGPTGLDSDLRKTEFNILSGTSMACPHVSGAAALLKSAHPDWSPAAIRSAMMTTASIVD 591 (625)
Q Consensus 520 APG~~i~s~~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~p~lt~~~vk~~L~~tA~~~~ 591 (625)
|||++|.+++..... .|..++|||||||+|||++|||+|++|+|+++|||++|++||++..
T Consensus 201 ApG~~i~s~~~~~~~-----------~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~ 261 (278)
T 2b6n_A 201 APGSSITSSWYTSNS-----------ATNTISGTSMASPHVAGVAALYLDENPNLSPAQVTNLLKTRATADK 261 (278)
T ss_dssp EECSSEEEECTTSTT-----------CEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEESC
T ss_pred eCCCCeECcccCCCC-----------CEEEeCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccCC
Confidence 999999999865322 7899999999999999999999999999999999999999998753
No 26
>4dzt_A Aqualysin-1, aqualysin-I; serine protease, calcium binding, inhibitor, hydrolase-hydro inhibitor complex; HET: PMS; 1.95A {Thermus aquaticus}
Probab=100.00 E-value=2e-48 Score=393.24 Aligned_cols=238 Identities=32% Similarity=0.392 Sum_probs=204.5
Q ss_pred cCCCccCCCCCCccEEEEcccccCCCCCCCCCCCCCCCCCCccccccccccccccCCCcceeeeeeecccccccCCCCCC
Q 006930 122 QQGLWSESDYGSDVIIGVFDTGIWPERRSFSDLNIGSIPSKWKGVCQVGVKFTAKNCNKKIIGARFFSKGHEAAGGSAGP 201 (625)
Q Consensus 122 ~~~~~~~~~tG~gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 201 (625)
+..+|..+.+|+||+|+|||||||++||+|.++ +...++|..
T Consensus 20 ~~~a~~~~~~G~gv~VaViDtGvd~~h~~l~~~---------------------------~~~~~~~~~----------- 61 (276)
T 4dzt_A 20 LSNSYTYTATGRGVNVYVIDTGIRTTHREFGGR---------------------------ARVGYDALG----------- 61 (276)
T ss_dssp CCSCEECSCCCTTCEEEEEESCCCTTCGGGTTC---------------------------EEEEEETTS-----------
T ss_pred cccceecCCCCCCcEEEEEccCCCCCChhHccC---------------------------eeccccCCC-----------
Confidence 356899999999999999999999999999742 222333322
Q ss_pred CCCCCCCccccCCCCCCCCCccccchhhccccCCCCCcccccCccccccCCccceeeeeeccCCCCCChhhHHHHHHHHH
Q 006930 202 IGGGINETVEFMSPRDADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKARLAVYKVCWKNAGCFDSDILAAFDAAV 281 (625)
Q Consensus 202 ~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~~~~~~~~i~~ai~~a~ 281 (625)
....|..||||||||||+|.. .||||+|+|+.+|++++++....++++++|+|++
T Consensus 62 -----------~~~~d~~gHGT~vAgiiag~~--------------~GvAp~a~l~~~~v~~~~~~~~~~~~~~ai~~~~ 116 (276)
T 4dzt_A 62 -----------GNGQDCNGHGTHVAGTIGGVT--------------YGVAKAVNLYAVRVLDCNGSGSTSGVIAGVDWVT 116 (276)
T ss_dssp -----------SCSCCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHH
T ss_pred -----------CCCCCCCCCHHHHHHHHHccc--------------cCCCCCCEEEEEEEeCCCCCcCHHHHHHHHHHHH
Confidence 235678899999999999873 7999999999999999877788999999999999
Q ss_pred Hc--CCCEEEeccCCCCCCCCCCCCChHHhhHHHhhhCCcEEEEecCCCCCCCCcc-cCCCCceEEeecCCCCCceeeEE
Q 006930 282 ND--GVDVISISIGGGDGISSPYYLDPIAIGSYGAASRGVFVSSSAGNDGPNGMSV-TNLAPWIVTVGAGTIDRNFPAEV 358 (625)
Q Consensus 282 ~~--~~~VIn~S~G~~~g~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~g~~~~~~-~~~~~~vitVga~~~~~~~~~~~ 358 (625)
++ +++|||||||.. ....+..++.++.++|++||+||||++...... |+..+++|+||+++.
T Consensus 117 ~~~~~~~vin~S~g~~-------~~~~~~~a~~~a~~~gvlvv~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~-------- 181 (276)
T 4dzt_A 117 RNHRRPAVANMSLGGG-------VSTALDNAVKNSIAAGVVYAVAAGNDNANACNYSPARVAEALTVGATTS-------- 181 (276)
T ss_dssp HHCCSSEEEEECCCEE-------CCHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECT--------
T ss_pred hcCCCCeEEEECCCCC-------CCHHHHHHHHHHHhCCCEEEEECCCCCCCCCCcCcccCCCEEEEEEECC--------
Confidence 97 899999999976 256788888899999999999999999876543 788899999998432
Q ss_pred EeCCCeeeeeeecccCCCCCCceeeEEecCCCCCcccccccCCCCCCCccCceEEEEecCCCchhhHHHHHHHcCceEEE
Q 006930 359 RLGDGRRLSGVSLYAGAPLSEKMYPLIYPGKSGVLSASLCMENSLDPNLVRGKIVICDRGSSPRVAKGLVVKKAGGVGMI 438 (625)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~i~~~~~g~~~~~~~~~~~~~~g~~g~~ 438 (625)
T Consensus 182 -------------------------------------------------------------------------------- 181 (276)
T 4dzt_A 182 -------------------------------------------------------------------------------- 181 (276)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEeCCCCCCccccCCCccCEEEeChhhHHHHHHHHHcCCCCeEEEEecceeecCcCCCcccccCCCCCCCCCCCCCCCcc
Q 006930 439 LANGISNGEGLVGDAHLLPACALGSDEGDAVKAYISSTANPTATIDFKGTILGIKPAPVVASFSARGPNGLNPEILKPDL 518 (625)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPdi 518 (625)
.+.+++||++||+. ||
T Consensus 182 --------------------------------------------------------~~~~~~~S~~g~~~--------dv 197 (276)
T 4dzt_A 182 --------------------------------------------------------SDARASFSNYGSCV--------DL 197 (276)
T ss_dssp --------------------------------------------------------TSBBCTTCCBSTTC--------CE
T ss_pred --------------------------------------------------------CCCcCCcCCCCCCc--------eE
Confidence 23678999999986 99
Q ss_pred ccCCCcEEeeecCCCCCCCCCCCcccccccccCchhhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHhccccccC
Q 006930 519 IAPGVNILAAWTEAVGPTGLDSDLRKTEFNILSGTSMACPHVSGAAALLKSAHPDWSPAAIRSAMMTTASIVDN 592 (625)
Q Consensus 519 ~APG~~i~s~~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~p~lt~~~vk~~L~~tA~~~~~ 592 (625)
+|||++|.++...... .|..++|||||||+|||++|||+|++|+++++|||++|++||++...
T Consensus 198 ~ApG~~i~s~~~~~~~-----------~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~~ 260 (276)
T 4dzt_A 198 FAPGASIPSAWYTSDT-----------ATQTLNGTSMATPHVAGVAALYLEQNPSATPASVASAILNGATTGRL 260 (276)
T ss_dssp EEECSSEEEECTTSSS-----------CEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEESCC
T ss_pred EeCCCCeEccccCCCC-----------ceEEeeEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCcCCcc
Confidence 9999999999876533 78999999999999999999999999999999999999999998753
No 27
>2pwa_A Proteinase K; structure, alanine boronic acid, hydrolase; 0.83A {Engyodontium album} SCOP: c.41.1.1 PDB: 1p7v_A 1p7w_A 2dqk_A 2duj_A 2g4v_A 2hd4_A 2hpz_A 2id8_A 2pq2_A 1ic6_A 2pwb_A* 2pyz_A* 2v8b_A 3aj8_A 3aj9_A 3dyb_A* 3gt3_A* 3gt4_A* 3l1k_A 3osz_A ...
Probab=100.00 E-value=8.5e-49 Score=395.07 Aligned_cols=239 Identities=34% Similarity=0.417 Sum_probs=202.8
Q ss_pred CCCCCccEEEEcccccCCCCCCCCCCCCCCCCCCccccccccccccccCCCcceeeeeeecccccccCCCCCCCCCCCCC
Q 006930 129 SDYGSDVIIGVFDTGIWPERRSFSDLNIGSIPSKWKGVCQVGVKFTAKNCNKKIIGARFFSKGHEAAGGSAGPIGGGINE 208 (625)
Q Consensus 129 ~~tG~gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (625)
..+|+||+|+|||||||++||+|.++ +...++|..
T Consensus 27 ~~~G~gv~VaViDsGvd~~H~~l~~~---------------------------~~~~~~~~~------------------ 61 (279)
T 2pwa_A 27 ESAGQGSCVYVIDTGIEASHPEFEGR---------------------------AQMVKTYYY------------------ 61 (279)
T ss_dssp TTTTTTEEEEEEESCCCTTCGGGTTC---------------------------EEEEEESSS------------------
T ss_pred CCCCCCCEEEEEeCCCCCCChhHhCc---------------------------cccccCCCC------------------
Confidence 37899999999999999999999742 222333321
Q ss_pred ccccCCCCCCCCCccccchhhccccCCCCCcccccCccccccCCccceeeeeeccCCCCCChhhHHHHHHHHHHcCC---
Q 006930 209 TVEFMSPRDADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKARLAVYKVCWKNAGCFDSDILAAFDAAVNDGV--- 285 (625)
Q Consensus 209 ~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~~~~~~~~i~~ai~~a~~~~~--- 285 (625)
...|..+|||||||||+|+. .||||+|+|+.+|++++++.+..++++++|+|++++++
T Consensus 62 -----~~~d~~gHGT~vAgiia~~~--------------~GvAp~a~i~~~~v~~~~g~~~~~~~~~ai~~a~~~~~~~~ 122 (279)
T 2pwa_A 62 -----SSRDGNGHGTHCAGTVGSRT--------------YGVAKKTQLFGVKVLDDNGSGQYSTIIAGMDFVASDKNNRN 122 (279)
T ss_dssp -----CSSCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHGGGSC
T ss_pred -----CCCCCCCCHHHHHHHHHhcc--------------cccCCCCEEEEEEeEcCCCCcCHHHHHHHHHHHHhcCcccc
Confidence 24578899999999999862 79999999999999998666888999999999999887
Q ss_pred ----CEEEeccCCCCCCCCCCCCChHHhhHHHhhhCCcEEEEecCCCCCCCC-cccCCCCceEEeecCCCCCceeeEEEe
Q 006930 286 ----DVISISIGGGDGISSPYYLDPIAIGSYGAASRGVFVSSSAGNDGPNGM-SVTNLAPWIVTVGAGTIDRNFPAEVRL 360 (625)
Q Consensus 286 ----~VIn~S~G~~~g~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~g~~~~-~~~~~~~~vitVga~~~~~~~~~~~~~ 360 (625)
+|||||||.. ....+..++.++.++|++||+||||++.+.. .+|+..+++|+||+++.
T Consensus 123 ~~~~~Vin~S~G~~-------~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~---------- 185 (279)
T 2pwa_A 123 CPKGVVASLSLGGG-------YSSSVNSAAARLQSSGVMVAVAAGNNNADARNYSPASEPSVCTVGASDR---------- 185 (279)
T ss_dssp CTTEEEEEECCCEE-------CCHHHHHHHHHHHHTTEEEEEECCSSSSBGGGEETTTCTTSEEEEEECT----------
T ss_pred CCCccEEEecCCCC-------CCHHHHHHHHHHHHCCCEEEEECCCCCCcCCCcCcccCCcEEEEEEecC----------
Confidence 9999999976 2467788888899999999999999998754 45788899999998432
Q ss_pred CCCeeeeeeecccCCCCCCceeeEEecCCCCCcccccccCCCCCCCccCceEEEEecCCCchhhHHHHHHHcCceEEEEE
Q 006930 361 GDGRRLSGVSLYAGAPLSEKMYPLIYPGKSGVLSASLCMENSLDPNLVRGKIVICDRGSSPRVAKGLVVKKAGGVGMILA 440 (625)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~i~~~~~g~~~~~~~~~~~~~~g~~g~~~~ 440 (625)
T Consensus 186 -------------------------------------------------------------------------------- 185 (279)
T 2pwa_A 186 -------------------------------------------------------------------------------- 185 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eCCCCCCccccCCCccCEEEeChhhHHHHHHHHHcCCCCeEEEEecceeecCcCCCcccccCCCCCCCCCCCCCCCcccc
Q 006930 441 NGISNGEGLVGDAHLLPACALGSDEGDAVKAYISSTANPTATIDFKGTILGIKPAPVVASFSARGPNGLNPEILKPDLIA 520 (625)
Q Consensus 441 ~~~~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPdi~A 520 (625)
.+.+++||++||+. ||+|
T Consensus 186 ------------------------------------------------------~~~~~~~S~~G~~~--------di~A 203 (279)
T 2pwa_A 186 ------------------------------------------------------YDRRSSFSNYGSVL--------DIFG 203 (279)
T ss_dssp ------------------------------------------------------TSBBCTTCCBSTTC--------CEEE
T ss_pred ------------------------------------------------------CCCcCCcCCCCCcc--------eEEE
Confidence 23678999999975 9999
Q ss_pred CCCcEEeeecCCCCCCCCCCCcccccccccCchhhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHhccccccCCCCCCccC
Q 006930 521 PGVNILAAWTEAVGPTGLDSDLRKTEFNILSGTSMACPHVSGAAALLKSAHPDWSPAAIRSAMMTTASIVDNSNQPMTDE 600 (625)
Q Consensus 521 PG~~i~s~~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~p~lt~~~vk~~L~~tA~~~~~~~~~~~~~ 600 (625)
||++|+++.+.+ .|..++|||||||+|||++|||+|+ |+++++|||++|++||++...
T Consensus 204 PG~~i~s~~~~~-------------~~~~~sGTS~AaP~VaG~aAll~~~-p~lt~~~v~~~L~~tA~~~~~-------- 261 (279)
T 2pwa_A 204 PGTDILSTWIGG-------------STRSISGTSMATPHVAGLAAYLMTL-GKTTAASACRYIADTANKGDL-------- 261 (279)
T ss_dssp ECSSEEEEETTT-------------EEEEECSHHHHHHHHHHHHHHHHHT-TSCCTTTHHHHHHHHSEESCC--------
T ss_pred ecCCeEEeecCC-------------CEEEcCChHHHHHHHHHHHHHHHhC-CCCCHHHHHHHHHHhCccccc--------
Confidence 999999998876 7899999999999999999999999 999999999999999998642
Q ss_pred CCCCCCCCCcccccccCccc
Q 006930 601 ATGNASTPYDFGAGHVNLDR 620 (625)
Q Consensus 601 ~~~~~~~~~~~G~G~ld~~~ 620 (625)
..+|+|.+|+..
T Consensus 262 --------~~~~~g~~n~l~ 273 (279)
T 2pwa_A 262 --------SNIPFGTVNLLA 273 (279)
T ss_dssp --------BSCCTTSCCEEC
T ss_pred --------CCCCCCCccEee
Confidence 146778877654
No 28
>1p8j_A Furin precursor; prohormone convertase, SPC1, PACE, P-domain; HET: DKA AR7 NAG FUL BMA MAN GAL FUC; 2.60A {Mus musculus} SCOP: b.18.1.20 c.41.1.1
Probab=100.00 E-value=3.9e-48 Score=419.61 Aligned_cols=293 Identities=15% Similarity=0.140 Sum_probs=216.2
Q ss_pred ccCCCccCCCCCCccEEEEcccccCCCCCCCCCCCCCCCCCCccccccccccccccCCCcceeeeeeecccccccCCCCC
Q 006930 121 NQQGLWSESDYGSDVIIGVFDTGIWPERRSFSDLNIGSIPSKWKGVCQVGVKFTAKNCNKKIIGARFFSKGHEAAGGSAG 200 (625)
Q Consensus 121 ~~~~~~~~~~tG~gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 200 (625)
++..+|+.+++|+||+|||||||||++||+|.++-. ....++|.. .+
T Consensus 26 ~~~~aw~~g~~G~gv~VaViDtGvd~~Hpdl~~~~~-------------------------~~~~~d~~~------~~-- 72 (471)
T 1p8j_A 26 NVKEAWAQGFTGHGIVVSILDDGIEKNHPDLAGNYD-------------------------PGASFDVND------QD-- 72 (471)
T ss_dssp CCHHHHHTTCSCTTCEEEEEEBCCCTTCTTTGGGBC-------------------------GGGCEETTT------TB--
T ss_pred ChHHHHhcCCCCCCCEEEEEeCCcCCCChhHhhccC-------------------------ccCcccccC------CC--
Confidence 345689999999999999999999999999974310 001122222 11
Q ss_pred CCCCCCCCccccCCCCCCCCCccccchhhccccCCCCCcccccCccccccCCccceeeeeeccCCCCCChhhHHHHHHHH
Q 006930 201 PIGGGINETVEFMSPRDADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKARLAVYKVCWKNAGCFDSDILAAFDAA 280 (625)
Q Consensus 201 ~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~~~~~~~~i~~ai~~a 280 (625)
..+.+.....|..+|||||||||+|..+++.+ +.||||+|+|+.+|+++. ..+++++|++|+
T Consensus 73 ------~~p~~~~~~~d~~gHGT~vAGiiaa~~~n~~g--------~~GvAp~a~i~~~rv~~g----~~~~~~~ai~~a 134 (471)
T 1p8j_A 73 ------PDPQPRYTQMNDNRHGTRCAGEVAAVANNGVC--------GVGVAYNARIGGVRMLDG----EVTDAVEARSLG 134 (471)
T ss_dssp ------SCCCCCCCTTCTTCHHHHHHHHHHCCSSSSSS--------CCCTTTTSEEEEEECSSS----CCCHHHHHHHHT
T ss_pred ------CCCCCccCCCCCCCcHHHHHHHHHeeccCCCC--------CEEECCCCeEEEEEccCC----chhHHHHHHHhh
Confidence 01111124568899999999999998765433 279999999999999863 467899999999
Q ss_pred HH-cCCCEEEeccCCCCCCC-CCCCCChHHhhHHHhh-----hCCcEEEEecCCCCCCCCc--c--cCCCCceEEeecCC
Q 006930 281 VN-DGVDVISISIGGGDGIS-SPYYLDPIAIGSYGAA-----SRGVFVSSSAGNDGPNGMS--V--TNLAPWIVTVGAGT 349 (625)
Q Consensus 281 ~~-~~~~VIn~S~G~~~g~~-~~~~~~~~~~~~~~a~-----~~Gi~vV~AAGN~g~~~~~--~--~~~~~~vitVga~~ 349 (625)
++ ++++|||||||...... .......+..++.++. .+|++||+||||+|..... . ...++++|+|||++
T Consensus 135 ~~~~~~~Vin~S~G~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~GvlvV~AAGN~g~~~~~~~~~~~~~~~~vItVgA~~ 214 (471)
T 1p8j_A 135 LNPNHIHIYSASWGPEDDGKTVDGPARLAEEAFFRGVSQGRGGLGSIFVWASGNGGREHDSCNCDGYTNSIYTLSISSAT 214 (471)
T ss_dssp SCTTTCCEEEECCBSCCSSSCCBCCCHHHHHHHHHHHHHHHHHTCCEEEEECCSCGGGTCBGGGBTTTTSTTEEEEEEEC
T ss_pred hccCCCeEEEeccCcCCCCCcccCcHHHHHHHHHHHHHhhccCCCeEEEEeCCCCCCCCCCcCcCcccCCCceEEEeccc
Confidence 99 89999999999863100 0011223444455554 3699999999999976321 1 23457899999843
Q ss_pred CCCceeeEEEeCCCeeeeeeecccCCCCCCceeeEEecCCCCCcccccccCCCCCCCccCceEEEEecCCCchhhHHHHH
Q 006930 350 IDRNFPAEVRLGDGRRLSGVSLYAGAPLSEKMYPLIYPGKSGVLSASLCMENSLDPNLVRGKIVICDRGSSPRVAKGLVV 429 (625)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~i~~~~~g~~~~~~~~~~~ 429 (625)
.
T Consensus 215 ~------------------------------------------------------------------------------- 215 (471)
T 1p8j_A 215 Q------------------------------------------------------------------------------- 215 (471)
T ss_dssp T-------------------------------------------------------------------------------
T ss_pred C-------------------------------------------------------------------------------
Confidence 2
Q ss_pred HHcCceEEEEEeCCCCCCccccCCCccCEEEeChhhHHHHHHHHHcCCCCeEEEEecceeecCcCCCcccccCCCCCCCC
Q 006930 430 KKAGGVGMILANGISNGEGLVGDAHLLPACALGSDEGDAVKAYISSTANPTATIDFKGTILGIKPAPVVASFSARGPNGL 509 (625)
Q Consensus 430 ~~~g~~g~~~~~~~~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fSs~Gp~~~ 509 (625)
.+.+++||++||..+
T Consensus 216 -----------------------------------------------------------------~g~~a~~S~~g~~~~ 230 (471)
T 1p8j_A 216 -----------------------------------------------------------------FGNVPWYSEACSSTL 230 (471)
T ss_dssp -----------------------------------------------------------------TSCCCTTCCBCTTCC
T ss_pred -----------------------------------------------------------------CCCcccccCCCCcce
Confidence 236789999999875
Q ss_pred CCCCCCCccccCCCcEEeeecCCCCCCCCCCCcccccccccCchhhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHhcccc
Q 006930 510 NPEILKPDLIAPGVNILAAWTEAVGPTGLDSDLRKTEFNILSGTSMACPHVSGAAALLKSAHPDWSPAAIRSAMMTTASI 589 (625)
Q Consensus 510 ~~~~~KPdi~APG~~i~s~~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~p~lt~~~vk~~L~~tA~~ 589 (625)
...+|...+||..|+++...+ ..|..++|||||||+|||++|||+|++|+|+++|||++|++||++
T Consensus 231 --~~~~~~~~~~g~~i~st~~~~------------~~~~~~sGTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~~ 296 (471)
T 1p8j_A 231 --ATTYSSGNQNEKQIVTTDLRQ------------KCTESHTGTSASAPLAAGIIALTLEANKNLTWRDMQHLVVQTSKP 296 (471)
T ss_dssp --EEEECCCSTTSCCEEEEETTT------------EEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBC
T ss_pred --EEeCCCCCCCCCCEEEeeCCC------------CccccCCCcccccchhhhHHHHHHhhCCCCCHHHHHHHHHhcCcc
Confidence 455666667778999997643 168999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCccCCCCCCCCCCcccccccCccccCC
Q 006930 590 VDNSNQPMTDEATGNASTPYDFGAGHVNLDRAMD 623 (625)
Q Consensus 590 ~~~~~~~~~~~~~~~~~~~~~~G~G~ld~~~Al~ 623 (625)
+......+..+..+ ...+..||||+||+++||+
T Consensus 297 ~~~~~~~~~~n~~g-~~~~~~~G~G~vda~~Av~ 329 (471)
T 1p8j_A 297 AHLNADDWATNGVG-RKVSHSYGYGLLDAGAMVA 329 (471)
T ss_dssp TTCCCSCCEECTTS-CEEBTTTBTCBCCHHHHHH
T ss_pred CCCCCCCceecCCC-cccCCCCCCEEEcHhHHHH
Confidence 87544333222111 1245699999999999874
No 29
>2qtw_B Proprotein convertase subtilisin/kexin type 9; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_B 3bps_A 3gcw_A 3gcx_A 3p5b_A 3p5c_A 2pmw_B 3h42_B 2w2n_A 2w2m_A 2w2p_A 2w2q_A 2xtj_A 2w2o_A
Probab=100.00 E-value=8.1e-48 Score=412.05 Aligned_cols=276 Identities=25% Similarity=0.262 Sum_probs=203.4
Q ss_pred CccCCCCCCccEEEEcccccCCCCCCCCCCCCCCCCCCccccccccccccccCCCcceeeeeeecccccccCCCCCCCCC
Q 006930 125 LWSESDYGSDVIIGVFDTGIWPERRSFSDLNIGSIPSKWKGVCQVGVKFTAKNCNKKIIGARFFSKGHEAAGGSAGPIGG 204 (625)
Q Consensus 125 ~~~~~~tG~gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 204 (625)
.|..+.+|+||+|+|||||||++||+|.++. .....++... .++.
T Consensus 18 aw~~~~tG~GV~VaVIDTGId~~HpdL~gr~--------------------------~~~~~~~v~~---~dg~------ 62 (546)
T 2qtw_B 18 EYQPPDGGSLVEVYLLDTSIQSDHREIEGRV--------------------------MVTDFENVPE---EDGT------ 62 (546)
T ss_dssp ------CCTTSEEEEEESCCCTTSTTTTTTE--------------------------EEEEEECCCC---CC--------
T ss_pred hcccCCCCCCcEEEEECCCCCCCChHHcccc--------------------------cccCcccccC---CCCc------
Confidence 6888999999999999999999999997531 1111111110 0000
Q ss_pred CCCCccccCCCCCCCCCccccchhhccccCCCCCcccccCccccccCCccceeeeeeccCCCCCChhhHHHHHHHHHHc-
Q 006930 205 GINETVEFMSPRDADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKARLAVYKVCWKNAGCFDSDILAAFDAAVND- 283 (625)
Q Consensus 205 ~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~~~~~~~~i~~ai~~a~~~- 283 (625)
.......|..||||||||||+|+. .||||+|+|+.+|++++++.++.++++++|+|+++.
T Consensus 63 -----~f~~~~~D~~GHGThVAGIIag~~--------------~GVAP~A~L~~vkVl~~~G~g~~s~ii~ai~~a~~~~ 123 (546)
T 2qtw_B 63 -----RFHRQASKCDSHGTHLAGVVSGRD--------------AGVAKGASMRSLRVLNCQGKGTVSGTLIGLEFIRKSQ 123 (546)
T ss_dssp ----------CTTTTHHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSEEEHHHHHHHHHHHHHHH
T ss_pred -----cccCCCCCCCChHHHHHHHHhccC--------------CCcCCCCEEEEEEEECCCCCcCHHHHHHHHHHHHHhh
Confidence 000235678999999999999874 699999999999999986667888999999999984
Q ss_pred -----CCCEEEeccCCCCCCCCCCCCChHHhhHHHhhhCCcEEEEecCCCCCCCC-cccCCCCceEEeecCCCCCceeeE
Q 006930 284 -----GVDVISISIGGGDGISSPYYLDPIAIGSYGAASRGVFVSSSAGNDGPNGM-SVTNLAPWIVTVGAGTIDRNFPAE 357 (625)
Q Consensus 284 -----~~~VIn~S~G~~~g~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~g~~~~-~~~~~~~~vitVga~~~~~~~~~~ 357 (625)
+++|||||||+. +...+..++.++.++|++||+||||++.+.. .+|+..+++|+|||++.+...
T Consensus 124 ~~~~~g~~VINmSlGg~-------~s~~l~~Ai~~A~~~GvlvVaAAGN~g~d~~~~sPAs~~~VItVGA~d~~g~~--- 193 (546)
T 2qtw_B 124 LVQPVGPLVVLLPLAGG-------YSRVLNAACQRLARAGVVLVTAAGNFRDDACLYSPASAPEVITVGATNAQDQP--- 193 (546)
T ss_dssp HHSCCSCEEEEECEEEE-------CCHHHHHHHHHHHHTTCEEEEECCSBSSBGGGEETTTCTTSEEEEEECTTSCB---
T ss_pred hhccCCCeEEEecCCCC-------CcHHHHHHHHHHHhCCCEEEEECCCCCCCCCccCcccCCCEEEEEEecCCCCc---
Confidence 899999999976 2467788888999999999999999998754 457888999999995432210
Q ss_pred EEeCCCeeeeeeecccCCCCCCceeeEEecCCCCCcccccccCCCCCCCccCceEEEEecCCCchhhHHHHHHHcCceEE
Q 006930 358 VRLGDGRRLSGVSLYAGAPLSEKMYPLIYPGKSGVLSASLCMENSLDPNLVRGKIVICDRGSSPRVAKGLVVKKAGGVGM 437 (625)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~i~~~~~g~~~~~~~~~~~~~~g~~g~ 437 (625)
T Consensus 194 -------------------------------------------------------------------------------- 193 (546)
T 2qtw_B 194 -------------------------------------------------------------------------------- 193 (546)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEeCCCCCCccccCCCccCEEEeChhhHHHHHHHHHcCCCCeEEEEecceeecCcCCCcccccCCCCCCCCCCCCCCCc
Q 006930 438 ILANGISNGEGLVGDAHLLPACALGSDEGDAVKAYISSTANPTATIDFKGTILGIKPAPVVASFSARGPNGLNPEILKPD 517 (625)
Q Consensus 438 ~~~~~~~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPd 517 (625)
...-..||++|+.. |
T Consensus 194 ---------------------------------------------------------a~~s~~fSn~G~~v--------D 208 (546)
T 2qtw_B 194 ---------------------------------------------------------VTLGTLGTNFGRCV--------D 208 (546)
T ss_dssp ---------------------------------------------------------CEETTEECCBSTTC--------C
T ss_pred ---------------------------------------------------------ccccCCcCCCCCcc--------e
Confidence 00012289999854 9
Q ss_pred cccCCCcEEeeecCCCCCCCCCCCcccccccccCchhhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHhccccccCCC---
Q 006930 518 LIAPGVNILAAWTEAVGPTGLDSDLRKTEFNILSGTSMACPHVSGAAALLKSAHPDWSPAAIRSAMMTTASIVDNSN--- 594 (625)
Q Consensus 518 i~APG~~i~s~~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~p~lt~~~vk~~L~~tA~~~~~~~--- 594 (625)
|+|||++|+++++.... .|..++|||||||||||++|||+|++|+|+++|||++|++||.+.....
T Consensus 209 I~APG~~I~St~~~~~~-----------~y~~~SGTSmAAP~VAG~aALlls~~P~ltp~qVr~~L~~tAt~~~i~~~~~ 277 (546)
T 2qtw_B 209 LFAPGEDIIGASSDCST-----------CFVSQSGTSQAAAHVAGIAAMMLSAEPELTLAELRQRLIHFSAKDVINEAWF 277 (546)
T ss_dssp EEEECSSEEEECTTSTT-----------CEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTSEESCSCGGGS
T ss_pred EEecCccEEeeccCCCC-----------cEeeeCcCcHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhccccccCCccC
Confidence 99999999999876432 7899999999999999999999999999999999999999997653221
Q ss_pred -------CCCccCCCCCCCCCCcccccc--cCccccC
Q 006930 595 -------QPMTDEATGNASTPYDFGAGH--VNLDRAM 622 (625)
Q Consensus 595 -------~~~~~~~~~~~~~~~~~G~G~--ld~~~Al 622 (625)
.+..- .........+|+|+ .++..+.
T Consensus 278 p~~~~~~tpN~l--~~~~~~~~~~G~~l~~~~~w~a~ 312 (546)
T 2qtw_B 278 PEDQRVLTPNLV--AALPPSTHGAGWQLFCRTVWSAH 312 (546)
T ss_dssp CHHHHTTSCCEE--CCCCCTTCC--CCCEEEEEECCC
T ss_pred ccccCCCCccch--hccCCcccccCCCcchhchhccC
Confidence 11110 11222456789999 7777765
No 30
>2id4_A Kexin; KEX2, kexin, furin, proprotein, prohormone, convertase, SUBT like protease, serine protease; HET: NDG; 1.90A {Saccharomyces cerevisiae} SCOP: b.18.1.20 c.41.1.1 PDB: 1r64_A* 1ot5_A*
Probab=100.00 E-value=1.5e-47 Score=417.58 Aligned_cols=284 Identities=19% Similarity=0.215 Sum_probs=212.2
Q ss_pred cCCCccCCCCCCccEEEEcccccCCCCCCCCCCCCCCCCCCccccccccccccccCCCcceeeeeeecccccccCCCCCC
Q 006930 122 QQGLWSESDYGSDVIIGVFDTGIWPERRSFSDLNIGSIPSKWKGVCQVGVKFTAKNCNKKIIGARFFSKGHEAAGGSAGP 201 (625)
Q Consensus 122 ~~~~~~~~~tG~gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 201 (625)
+..+|+.+++|+||+|||||||||++||+|.++-. ..+.++|.. ..
T Consensus 43 ~~~aw~~g~tG~gv~VaViDtGvd~~Hpdl~~~~~-------------------------~~~~~d~~~------~~--- 88 (503)
T 2id4_A 43 VLDLWYNNITGAGVVAAIVDDGLDYENEDLKDNFC-------------------------AEGSWDFND------NT--- 88 (503)
T ss_dssp CHHHHHTTCSCTTCEEEEEESCCCTTSTTTTTTBC-------------------------GGGCEETTT------TB---
T ss_pred hHHHHhcCCCCCCeEEEEEeCCCCCCChhHhhccc-------------------------ccCcccCCC------CC---
Confidence 45689999999999999999999999999985310 001222322 11
Q ss_pred CCCCCCCccccCCCCCCCCCccccchhhccccCCCCCcccccCccccccCCccceeeeeeccCCCCCChhhHHHHHHHHH
Q 006930 202 IGGGINETVEFMSPRDADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKARLAVYKVCWKNAGCFDSDILAAFDAAV 281 (625)
Q Consensus 202 ~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~~~~~~~~i~~ai~~a~ 281 (625)
.+..+..|..+|||||||||+|...++.+ +.||||+|+|+.+|+++. ..+..+++++|+|++
T Consensus 89 --------~~~~p~~d~~gHGT~vAGiiaa~~~n~~~--------~~GvAp~a~i~~~rv~~~--~~~~~~~~~ai~~a~ 150 (503)
T 2id4_A 89 --------NLPKPRLSDDYHGTRCAGEIAAKKGNNFC--------GVGVGYNAKISGIRILSG--DITTEDEAASLIYGL 150 (503)
T ss_dssp --------SCCCCCSTTTTHHHHHHHHHHCCSSSSSS--------CCCTTTTSEEEEEECTTS--CCCHHHHHHHTTTTT
T ss_pred --------CCCCCCCCCCChHHHHHHHHHhccCCCCC--------cEEECCCCEEEEEEeeCC--CCChHHHHHHHHhHh
Confidence 01122357889999999999998755433 279999999999999975 367788999999999
Q ss_pred HcCCCEEEeccCCCCCC-CCCCCCChHHhhHHHhh-----hCCcEEEEecCCCCCCC--CcccC--CCCceEEeecCCCC
Q 006930 282 NDGVDVISISIGGGDGI-SSPYYLDPIAIGSYGAA-----SRGVFVSSSAGNDGPNG--MSVTN--LAPWIVTVGAGTID 351 (625)
Q Consensus 282 ~~~~~VIn~S~G~~~g~-~~~~~~~~~~~~~~~a~-----~~Gi~vV~AAGN~g~~~--~~~~~--~~~~vitVga~~~~ 351 (625)
+++ +|||||||..... ........+..++.++. .+|++||+||||+|... +.++. .++++|+|||++.
T Consensus 151 ~~~-~Iin~S~G~~~~~~~~~~~~~~~~~a~~~a~~~~r~~~GvlvV~AAGN~g~~~~~~~~~~~~~~~~vI~VgA~~~- 228 (503)
T 2id4_A 151 DVN-DIYSCSWGPADDGRHLQGPSDLVKKALVKGVTEGRDSKGAIYVFASGNGGTRGDNCNYDGYTNSIYSITIGAIDH- 228 (503)
T ss_dssp TTC-SEEEECEESCCSSSCCBCCCHHHHHHHHHHHHHHHHHTCCEEEEECCSCGGGTCCGGGBTTTTCTTEEEEEEECT-
T ss_pred hcC-CEEEeCCCcCCCCccccCchHHHHHHHHHHHHhcccCCCcEEEEecCCCCCcCCCCCCCcccCCCCEEEEEeeCC-
Confidence 988 9999999987310 00112234555665665 47999999999999753 23332 4578999998432
Q ss_pred CceeeEEEeCCCeeeeeeecccCCCCCCceeeEEecCCCCCcccccccCCCCCCCccCceEEEEecCCCchhhHHHHHHH
Q 006930 352 RNFPAEVRLGDGRRLSGVSLYAGAPLSEKMYPLIYPGKSGVLSASLCMENSLDPNLVRGKIVICDRGSSPRVAKGLVVKK 431 (625)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~i~~~~~g~~~~~~~~~~~~~ 431 (625)
T Consensus 229 -------------------------------------------------------------------------------- 228 (503)
T 2id4_A 229 -------------------------------------------------------------------------------- 228 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCceEEEEEeCCCCCCccccCCCccCEEEeChhhHHHHHHHHHcCCCCeEEEEecceeecCcCCCcccccCCCCCCCCCC
Q 006930 432 AGGVGMILANGISNGEGLVGDAHLLPACALGSDEGDAVKAYISSTANPTATIDFKGTILGIKPAPVVASFSARGPNGLNP 511 (625)
Q Consensus 432 ~g~~g~~~~~~~~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fSs~Gp~~~~~ 511 (625)
.+.+++||++||..
T Consensus 229 ---------------------------------------------------------------~~~~a~~S~~g~~~--- 242 (503)
T 2id4_A 229 ---------------------------------------------------------------KDLHPPYSEGCSAV--- 242 (503)
T ss_dssp ---------------------------------------------------------------TSCCCTTCCCCTTE---
T ss_pred ---------------------------------------------------------------CCCcCCcCCCCCcc---
Confidence 23678999999987
Q ss_pred CCCCCcccc----CCCcEEeeecCCCCCCCCCCCcccccccccCchhhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHhcc
Q 006930 512 EILKPDLIA----PGVNILAAWTEAVGPTGLDSDLRKTEFNILSGTSMACPHVSGAAALLKSAHPDWSPAAIRSAMMTTA 587 (625)
Q Consensus 512 ~~~KPdi~A----PG~~i~s~~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~p~lt~~~vk~~L~~tA 587 (625)
|++| ||..|+++.... ..|..++|||||||+|||++|||+|++|+|+++|||++|++||
T Consensus 243 -----~~~a~~~gpG~~I~st~~~~------------~~~~~~sGTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA 305 (503)
T 2id4_A 243 -----MAVTYSSGSGEYIHSSDING------------RCSNSHGGTSAAAPLAAGVYTLLLEANPNLTWRDVQYLSILSA 305 (503)
T ss_dssp -----EEEEECSBTTBCEEEECSTT------------CEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHC
T ss_pred -----eEeecCCCCCCceEeecCCC------------CceecCCCccccchhhhHHHHHHHHhCCCCCHHHHHHHHHhcc
Confidence 7776 899999994332 1789999999999999999999999999999999999999999
Q ss_pred ccccCC-CCCCccCCCCCCCCCCcccccccCccccCC
Q 006930 588 SIVDNS-NQPMTDEATGNASTPYDFGAGHVNLDRAMD 623 (625)
Q Consensus 588 ~~~~~~-~~~~~~~~~~~~~~~~~~G~G~ld~~~Al~ 623 (625)
+++... ...+..+.. ....+..||||+||+++||+
T Consensus 306 ~~~~~~~~~~~~~~~~-g~~~~~~~G~G~vda~~Av~ 341 (503)
T 2id4_A 306 VGLEKNADGDWRDSAM-GKKYSHRYGFGKIDAHKLIE 341 (503)
T ss_dssp BCCTTCGGGCCEECSS-SSEEBTTTBTCBCCHHHHHH
T ss_pred ccCCCCcCCCceecCC-CCccCcccCCcEecHHHHHH
Confidence 998654 222211111 12245689999999999874
No 31
>3f7m_A Alkaline serine protease VER112; verticillium psalliotae, cuticle- degrading protease, nematodes, hydrolase, secreted, zymogen; 1.60A {Lecanicillium psalliotae} SCOP: c.41.1.1 PDB: 3f7o_A
Probab=100.00 E-value=1.1e-46 Score=381.16 Aligned_cols=229 Identities=32% Similarity=0.444 Sum_probs=196.4
Q ss_pred CccCCCCCCccEEEEcccccCCCCCCCCCCCCCCCCCCccccccccccccccCCCcceeeeeeecccccccCCCCCCCCC
Q 006930 125 LWSESDYGSDVIIGVFDTGIWPERRSFSDLNIGSIPSKWKGVCQVGVKFTAKNCNKKIIGARFFSKGHEAAGGSAGPIGG 204 (625)
Q Consensus 125 ~~~~~~tG~gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 204 (625)
+|+.. +|+||+|+|||||||++||+|.++ +....+|..
T Consensus 25 ~~~~~-~G~gv~VaViDtGvd~~h~~l~~~---------------------------~~~~~~~~~-------------- 62 (279)
T 3f7m_A 25 AYDTS-AGAGACVYVIDTGVEDTHPDFEGR---------------------------AKQIKSYAS-------------- 62 (279)
T ss_dssp EECTT-TTTTEEEEEEESCCCTTCGGGTTC---------------------------EEEEEECSS--------------
T ss_pred eecCC-CCCCCEEEEEcCCCCCCChhhccc---------------------------cccccCCCC--------------
Confidence 45555 899999999999999999999742 333333322
Q ss_pred CCCCccccCCCCCCCCCccccchhhccccCCCCCcccccCccccccCCccceeeeeeccCCCCCChhhHHHHHHHHHHcC
Q 006930 205 GINETVEFMSPRDADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKARLAVYKVCWKNAGCFDSDILAAFDAAVNDG 284 (625)
Q Consensus 205 ~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~~~~~~~~i~~ai~~a~~~~ 284 (625)
...|..||||||||||+|+. .||||+|+|+.+|+++.++.+..++++++|+|+++++
T Consensus 63 ---------~~~d~~gHGT~vAgii~~~~--------------~GvAp~a~l~~~~v~~~~~~~~~~~~~~ai~~~~~~~ 119 (279)
T 3f7m_A 63 ---------TARDGHGHGTHCAGTIGSKT--------------WGVAKKVSIFGVKVLDDSGSGSLSNIIAGMDFVASDR 119 (279)
T ss_dssp ---------SSSCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHG
T ss_pred ---------CCCCCCCcHHHHHHHHhcCc--------------cccCCCCEEEEEEeeCCCCCcCHHHHHHHHHHHHhcc
Confidence 12278899999999999863 7999999999999999877788999999999999976
Q ss_pred -------CCEEEeccCCCCCCCCCCCCChHHhhHHHhhhCCcEEEEecCCCCCCCCc-ccCCCCceEEeecCCCCCceee
Q 006930 285 -------VDVISISIGGGDGISSPYYLDPIAIGSYGAASRGVFVSSSAGNDGPNGMS-VTNLAPWIVTVGAGTIDRNFPA 356 (625)
Q Consensus 285 -------~~VIn~S~G~~~g~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~g~~~~~-~~~~~~~vitVga~~~~~~~~~ 356 (625)
++|||||||.. ....+..++.++.++|++||+||||++..... .++..+++|+||+++.
T Consensus 120 ~~~~~~~~~Vin~S~g~~-------~~~~~~~a~~~a~~~gv~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~------ 186 (279)
T 3f7m_A 120 QSRNCPRRTVASMSLGGG-------YSAALNQAAARLQSSGVFVAVAAGNDNRDAANTSPASEPTVCTVGATDS------ 186 (279)
T ss_dssp GGSCCTTEEEEEECCCEE-------CCHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECT------
T ss_pred ccccCCCCeEEEeCCCcC-------ccHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCcCCCCCCCEEEEeecCC------
Confidence 89999999976 35678888889999999999999999987554 3788899999998432
Q ss_pred EEEeCCCeeeeeeecccCCCCCCceeeEEecCCCCCcccccccCCCCCCCccCceEEEEecCCCchhhHHHHHHHcCceE
Q 006930 357 EVRLGDGRRLSGVSLYAGAPLSEKMYPLIYPGKSGVLSASLCMENSLDPNLVRGKIVICDRGSSPRVAKGLVVKKAGGVG 436 (625)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~i~~~~~g~~~~~~~~~~~~~~g~~g 436 (625)
T Consensus 187 -------------------------------------------------------------------------------- 186 (279)
T 3f7m_A 187 -------------------------------------------------------------------------------- 186 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEEeCCCCCCccccCCCccCEEEeChhhHHHHHHHHHcCCCCeEEEEecceeecCcCCCcccccCCCCCCCCCCCCCCC
Q 006930 437 MILANGISNGEGLVGDAHLLPACALGSDEGDAVKAYISSTANPTATIDFKGTILGIKPAPVVASFSARGPNGLNPEILKP 516 (625)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KP 516 (625)
.+.+++||++||..
T Consensus 187 ----------------------------------------------------------~~~~~~~S~~g~~~-------- 200 (279)
T 3f7m_A 187 ----------------------------------------------------------NDVRSTFSNYGRVV-------- 200 (279)
T ss_dssp ----------------------------------------------------------TSBBCTTCCBSTTC--------
T ss_pred ----------------------------------------------------------CCCCCCCCCCCCCC--------
Confidence 23678999999976
Q ss_pred ccccCCCcEEeeecCCCCCCCCCCCcccccccccCchhhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHhcccccc
Q 006930 517 DLIAPGVNILAAWTEAVGPTGLDSDLRKTEFNILSGTSMACPHVSGAAALLKSAHPDWSPAAIRSAMMTTASIVD 591 (625)
Q Consensus 517 di~APG~~i~s~~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~p~lt~~~vk~~L~~tA~~~~ 591 (625)
||+|||++|+++.+.+ .|..++|||||||+|||++|||+|++|+ ++++||++|++||++..
T Consensus 201 di~ApG~~i~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~p~-t~~~v~~~L~~tA~~~~ 261 (279)
T 3f7m_A 201 DIFAPGTSITSTWIGG-------------RTNTISGTSMATPHIAGLAAYLFGLEGG-SAGAMCGRIQTLSTKNV 261 (279)
T ss_dssp CEEEECSSEEEECGGG-------------CEEEECSHHHHHHHHHHHHHHHHHHTCC-CTTTHHHHHHHHSEESC
T ss_pred eEEECCCCeEeecCCC-------------CEEEeeEHHHHHHHHHHHHHHHHHhCCC-CHHHHHHHHHHhccccc
Confidence 9999999999998876 7899999999999999999999999999 99999999999999864
No 32
>2oxa_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria} PDB: 3hjr_A
Probab=100.00 E-value=1.4e-46 Score=419.29 Aligned_cols=295 Identities=23% Similarity=0.238 Sum_probs=198.8
Q ss_pred cCCCccCCCCCCccEEEEcccccCCCCCCCCCCCCCCCCCCccccccccccccccCCCcceeeeeeecccccccCCCCCC
Q 006930 122 QQGLWSESDYGSDVIIGVFDTGIWPERRSFSDLNIGSIPSKWKGVCQVGVKFTAKNCNKKIIGARFFSKGHEAAGGSAGP 201 (625)
Q Consensus 122 ~~~~~~~~~tG~gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 201 (625)
+..+|..+++|+||+|||||||||++||+|.++- ..+.++|..+ .
T Consensus 59 ~~~aw~~g~~G~gV~VaViDtGid~~Hpdl~~~~--------------------------~~~~~~~~~~------~--- 103 (600)
T 2oxa_A 59 LWWAHRTGVLGHGVNVAVVDDGLAIAHPDLADNV--------------------------RPGSKNVVTG------S--- 103 (600)
T ss_dssp CHHHHHTTCSCTTCEEEEESSCCCTTCTTTGGGB--------------------------CSCCBCTTTC------S---
T ss_pred hHHHHhcCCCCCCcEEEEecCCcCCCCcchhhcc--------------------------ccCceeccCC------C---
Confidence 3568999999999999999999999999997431 1112222221 1
Q ss_pred CCCCCCCccccCCCC-CCCCCccccchhhccccCCCCCcccccCccccccCCccceeeeeeccCCCCCCh-hhHHHHHHH
Q 006930 202 IGGGINETVEFMSPR-DADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKARLAVYKVCWKNAGCFD-SDILAAFDA 279 (625)
Q Consensus 202 ~~~~~~~~~~~~~~~-d~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~~~~~~-~~i~~ai~~ 279 (625)
+...+. +..||||||||||||. .++.+ +.||||+|+|+.+|+++..+.... ..+++....
T Consensus 104 ---------~d~~p~d~~~gHGT~vAGiiaa~-~n~~g--------~~GVAp~A~l~~vkv~~~~~~~~~~~~~~~~~~~ 165 (600)
T 2oxa_A 104 ---------DDPTPTDPDTGHGTSVSGIIAAV-DNAIG--------TKGIAPRAQLQGFNLLDDNSQQLQKDWLYALGDS 165 (600)
T ss_dssp ---------SCCCCCSTTCCHHHHHHHHHHCC-SSSSS--------CCCSSTTCEEEEECTTSTTCCCCHHHHHHHTTTS
T ss_pred ---------CCCCCCCCCCCCccHHHHHhhcc-cCCCc--------ceEEccCCceEEEeeecCcccchHHHHHHHHhhh
Confidence 011233 3789999999999998 44332 289999999999999988433322 334444344
Q ss_pred HHHcCCCEEEeccCCCCCCCCCCCCC----hHHhhHHH---hhhCCcEEEEecCCCCCCCC-------------------
Q 006930 280 AVNDGVDVISISIGGGDGISSPYYLD----PIAIGSYG---AASRGVFVSSSAGNDGPNGM------------------- 333 (625)
Q Consensus 280 a~~~~~~VIn~S~G~~~g~~~~~~~~----~~~~~~~~---a~~~Gi~vV~AAGN~g~~~~------------------- 333 (625)
+..++++|||||||... ......+ .+..++.. +.++|++||+||||+|....
T Consensus 166 a~~~~~~Vin~S~G~~~--~~~~~~~~~~~~~~~~~~~~~~a~~~GilvV~AAGN~g~~~~~~~~~~~Pa~~~~~~p~~~ 243 (600)
T 2oxa_A 166 NASRDNRVFNHSYRMSV--VDPRSANSLDQSQLDRLFEQQTLKAQGAAYIKAAGNGFNKIAAGGYVLNRTGNGPKLPFEN 243 (600)
T ss_dssp HHHHTCSEEEECCCCCC--SSCCCSCSHHHHHHHHHHHHHHHSTTCCEEEEECCSCSSEEEETTEEEEEESCSSCCCSSB
T ss_pred hcccCCeEEEEeccCCC--CCccccCchhHHHHHHHHHHHHhccCCcEEEEecCCCCccCCCCcceecCccccccccccc
Confidence 67789999999999873 1111222 22222222 45789999999999986421
Q ss_pred ---cccCCCCceEEeecCCCCCceeeEEEeCCCeeeeeeecccCCCCCCceeeEEecCCCCCcccccccCCCCCCCccCc
Q 006930 334 ---SVTNLAPWIVTVGAGTIDRNFPAEVRLGDGRRLSGVSLYAGAPLSEKMYPLIYPGKSGVLSASLCMENSLDPNLVRG 410 (625)
Q Consensus 334 ---~~~~~~~~vitVga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g 410 (625)
..++.++++|+|||++
T Consensus 244 ~n~~~~~~s~~vItVgA~~------------------------------------------------------------- 262 (600)
T 2oxa_A 244 SNLDPSNSNFWNLVVSALN------------------------------------------------------------- 262 (600)
T ss_dssp TTSSGGGGSSSEEEEEEEC-------------------------------------------------------------
T ss_pred cccCCcccCceeEEEeccc-------------------------------------------------------------
Confidence 0111233455555521
Q ss_pred eEEEEecCCCchhhHHHHHHHcCceEEEEEeCCCCCCccccCCCccCEEEeChhhHHHHHHHHHcCCCCeEEEEecceee
Q 006930 411 KIVICDRGSSPRVAKGLVVKKAGGVGMILANGISNGEGLVGDAHLLPACALGSDEGDAVKAYISSTANPTATIDFKGTIL 490 (625)
Q Consensus 411 ~i~~~~~g~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 490 (625)
T Consensus 263 -------------------------------------------------------------------------------- 262 (600)
T 2oxa_A 263 -------------------------------------------------------------------------------- 262 (600)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCcCCCcccccCCCCCCCCCCCCCCCccccCCCcEEe-------eecCCCCCCC--------------CCCCcccccccc
Q 006930 491 GIKPAPVVASFSARGPNGLNPEILKPDLIAPGVNILA-------AWTEAVGPTG--------------LDSDLRKTEFNI 549 (625)
Q Consensus 491 ~~~~~~~~a~fSs~Gp~~~~~~~~KPdi~APG~~i~s-------~~~~~~~~~~--------------~~~~~~~~~y~~ 549 (625)
..+.+++||++||+. ||+|||++|.+ +...+..... ...+.....|..
T Consensus 263 ---~~g~~a~fS~~G~~v--------dv~APG~~i~~~~p~i~ttd~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~ 331 (600)
T 2oxa_A 263 ---ADGVRSSYSSVGSNI--------FLSATGGEYGTDTPAMVTTDLPGCDMGYNRTDDPSTNRLHGNSQLDASCDYNGV 331 (600)
T ss_dssp ---TTSSBCTTCCBCTTE--------EEEEECCSCSSSSCCEEEECCSSTTSSSSSTTSCCSSTTTTCTTTCTTCCEEEE
T ss_pred ---CCCCcCCcCCCCCCe--------EEEeccCCCCcCCCceEeccccccccccccccccccccccccccccCCcccccc
Confidence 234789999999987 99999998543 3221110000 000111234889
Q ss_pred cCchhhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHhccccccCCCCCCc-------------------cCCCCCCCCCCc
Q 006930 550 LSGTSMACPHVSGAAALLKSAHPDWSPAAIRSAMMTTASIVDNSNQPMT-------------------DEATGNASTPYD 610 (625)
Q Consensus 550 ~sGTSmAaP~VAG~aALl~~~~p~lt~~~vk~~L~~tA~~~~~~~~~~~-------------------~~~~~~~~~~~~ 610 (625)
++|||||||||||++|||+|++|+|++++||++|++||+++...+.+.. .........+..
T Consensus 332 ~sGTS~AaP~VAGvaALl~s~~P~lt~~~vk~~L~~tA~~~~~~~~~~~~~~~~~~G~~~~~~~~~~w~~n~~g~~~~~~ 411 (600)
T 2oxa_A 332 MNGTSSATPSTSGAMALLMSAYPDLSVRDLRDLLARSATRVDAKHQPVMVSYTSSTGKVRDVKGLEGWERNAAGMWFSPT 411 (600)
T ss_dssp ECSHHHHHHHHHHHHHHHHHHSTTSCHHHHHHHHHHHCBCCSTTCCCEEEEEECTTSCEEEEEEECCSEECTTSCEEBTT
T ss_pred cccchHHhHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccCCcccccccccccccccccccccccccccccCCCcccccc
Confidence 9999999999999999999999999999999999999999875542211 001122234578
Q ss_pred ccccccCccccCC
Q 006930 611 FGAGHVNLDRAMD 623 (625)
Q Consensus 611 ~G~G~ld~~~Al~ 623 (625)
||||+||+++||+
T Consensus 412 ~G~G~vda~~Av~ 424 (600)
T 2oxa_A 412 YGFGLIDVNKALE 424 (600)
T ss_dssp TBTCBCCHHHHHH
T ss_pred CCCchhhHHHHHH
Confidence 9999999999874
No 33
>3hjr_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria}
Probab=100.00 E-value=8.7e-45 Score=406.62 Aligned_cols=295 Identities=25% Similarity=0.270 Sum_probs=200.4
Q ss_pred cCCCccCCCCCCccEEEEcccccCCCCCCCCCCCCCCCCCCccccccccccccccCCCcceeeeeeecccccccCCCCCC
Q 006930 122 QQGLWSESDYGSDVIIGVFDTGIWPERRSFSDLNIGSIPSKWKGVCQVGVKFTAKNCNKKIIGARFFSKGHEAAGGSAGP 201 (625)
Q Consensus 122 ~~~~~~~~~tG~gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 201 (625)
+..+|+.+++|+||+|||||||||++||||.++- ..+.++|..+ .
T Consensus 59 v~~aw~~g~tG~GV~VaViDtGid~~HpDL~~n~--------------------------~~~~~~~~~~------~--- 103 (600)
T 3hjr_A 59 LWWAHRTGVLGQGVNVAVVDDGLAIAHPDLADNV--------------------------RPGSKNVVTG------S--- 103 (600)
T ss_dssp CHHHHHHTCSCTTCEEEEESSCCCTTCTTTGGGB--------------------------CSCCBCTTTS------S---
T ss_pred HHHHHHcCCCCCCeEEEEEcCCCCCCChhHhhcc--------------------------ccCcceeecC------C---
Confidence 3468999999999999999999999999997431 1112222221 1
Q ss_pred CCCCCCCccccCCCCCCCCCccccchhhccccCCCCCcccccCccccccCCccceeeeeeccCCCCCChhhHHHHH-HHH
Q 006930 202 IGGGINETVEFMSPRDADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKARLAVYKVCWKNAGCFDSDILAAF-DAA 280 (625)
Q Consensus 202 ~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~~~~~~~~i~~ai-~~a 280 (625)
.+..+..|.++|||||||||||.. ++. | +.||||+|+|+.+|++++.+....++++.++ +++
T Consensus 104 --------~dp~p~~~~~gHGThVAGiIAa~~-n~~---g-----~~GVAp~A~l~~~rvl~~~~~~~~~~~~~a~~~~~ 166 (600)
T 3hjr_A 104 --------DDPTPTDPDTAHGTSVSGIIAAVD-NAI---G-----TKGIAPRAQLQGFNLLDDNSQQLQKDWLYALGDSN 166 (600)
T ss_dssp --------SCCCCCSTTCCHHHHHHHHHHCCS-SSS---S-----CCCSSTTCEEEEECTTSTTCCCCHHHHHHHTTSSH
T ss_pred --------CCCCCCCCCCChHHHHHHHHhEeC-CCC---C-----cEEeCCCCEEEEEEeecCCCCccHHHHHHHhhhhh
Confidence 111234467899999999999963 322 2 2799999999999999986777788887776 667
Q ss_pred HHcCCCEEEeccCCCCCCCCCCCCChH-----HhhHHH--hhhCCcEEEEecCCCCCCCCc-------------------
Q 006930 281 VNDGVDVISISIGGGDGISSPYYLDPI-----AIGSYG--AASRGVFVSSSAGNDGPNGMS------------------- 334 (625)
Q Consensus 281 ~~~~~~VIn~S~G~~~g~~~~~~~~~~-----~~~~~~--a~~~Gi~vV~AAGN~g~~~~~------------------- 334 (625)
..++++|||||||... ..+...... ..++.. ...+|+++|+||||.+.....
T Consensus 167 ~~~~~~I~n~S~G~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~AaGNg~~~~~~~~~~~~~~g~~~~~~~~~~ 244 (600)
T 3hjr_A 167 ASRDNRVFNQSYGMSV--VDPRSANSLDQSQLDRLFEQQTLKAQGAAYIKAAGNGFNKIAAGGYVLNRTGNGPKLPFENS 244 (600)
T ss_dssp HHHTCSEEEECCCCCC--SSCCCSCSHHHHHHHHHHHHHHHSTTCCEEEEECCSCSSEEEETTEEEEEESSCCCCCSSBT
T ss_pred hhcCCCEEecccCccc--cCCccCCcchhhhHHHHHHHhhhccCCcEEEEeccCccccccccccccccCCCCCCCCcccc
Confidence 7889999999999763 222222221 111111 236899999999997643110
Q ss_pred ---ccCCCCceEEeecCCCCCceeeEEEeCCCeeeeeeecccCCCCCCceeeEEecCCCCCcccccccCCCCCCCccCce
Q 006930 335 ---VTNLAPWIVTVGAGTIDRNFPAEVRLGDGRRLSGVSLYAGAPLSEKMYPLIYPGKSGVLSASLCMENSLDPNLVRGK 411 (625)
Q Consensus 335 ---~~~~~~~vitVga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~ 411 (625)
.+..++++|+|||
T Consensus 245 ~~d~~~~~~~~IsVgA---------------------------------------------------------------- 260 (600)
T 3hjr_A 245 NLDPSNSNFWNLVVSA---------------------------------------------------------------- 260 (600)
T ss_dssp TSSGGGGSSSEEEEEE----------------------------------------------------------------
T ss_pred cccCccccCcceEEee----------------------------------------------------------------
Confidence 0011112222222
Q ss_pred EEEEecCCCchhhHHHHHHHcCceEEEEEeCCCCCCccccCCCccCEEEeChhhHHHHHHHHHcCCCCeEEEEecceeec
Q 006930 412 IVICDRGSSPRVAKGLVVKKAGGVGMILANGISNGEGLVGDAHLLPACALGSDEGDAVKAYISSTANPTATIDFKGTILG 491 (625)
Q Consensus 412 i~~~~~g~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 491 (625)
T Consensus 261 -------------------------------------------------------------------------------- 260 (600)
T 3hjr_A 261 -------------------------------------------------------------------------------- 260 (600)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CcCCCcccccCCCCCCCCCCCCCCCccccCCCcE--------EeeecCCCCCC-------------CCCCCccccccccc
Q 006930 492 IKPAPVVASFSARGPNGLNPEILKPDLIAPGVNI--------LAAWTEAVGPT-------------GLDSDLRKTEFNIL 550 (625)
Q Consensus 492 ~~~~~~~a~fSs~Gp~~~~~~~~KPdi~APG~~i--------~s~~~~~~~~~-------------~~~~~~~~~~y~~~ 550 (625)
....+.++.||++|+.. +++|||+.+ .+..++..... ..........|..+
T Consensus 261 ~~~~g~~a~yS~~G~~v--------~~~apg~~~~~~~~~~vt~~~pG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (600)
T 3hjr_A 261 LNADGVRSSYSSVGSNI--------FLSATGGEYGTDTPAMVTTDLPGCDMGYNRTDDPSTNRLHGNSQLDASCDYNGVM 332 (600)
T ss_dssp ECTTSSBCTTCCBCTTC--------CEEEECCSCSSSSCCEEEECCSSTTSSSSSTTSCCSSTTTTCTTTCTTCCEEEEE
T ss_pred ecCCCCEeecccCCcce--------eeccCCCCCCCCCcceeeecCCCccccccccCCccccccccccccCCCCCceecc
Confidence 12345789999999987 899998753 22222211000 00111233468889
Q ss_pred CchhhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHhccccccCCCCCC--------------------ccCCCCCCCCCCc
Q 006930 551 SGTSMACPHVSGAAALLKSAHPDWSPAAIRSAMMTTASIVDNSNQPM--------------------TDEATGNASTPYD 610 (625)
Q Consensus 551 sGTSmAaP~VAG~aALl~~~~p~lt~~~vk~~L~~tA~~~~~~~~~~--------------------~~~~~~~~~~~~~ 610 (625)
+|||||||||||++|||+|++|+||++|||++|++||++++....|. ..+..+.. ....
T Consensus 333 sGTSmAaP~VAGvaALll~a~P~lt~~~v~~~L~~TA~~~d~~~~p~~~~~~~~~~~~~~~~~~~~w~~N~aG~~-~s~~ 411 (600)
T 3hjr_A 333 NGTSSATPSTSGAMALLMSAYPDLSVRDLRDLLARSATRVDAKHQPVMVSYTSSTGKVRDVKGLEGWERNAAGMW-FSPT 411 (600)
T ss_dssp CSHHHHHHHHHHHHHHHHHHSTTSCHHHHHHHHHHHCBCCSTTCCCEEEEEECTTSCEEEEEEECCSEECTTSCE-EBTT
T ss_pred ccccccchhHHHHHHHHHHHCCCCCHHHHHHHHHhhCccCCCCCCcccccccccccccccccccCCcccccCCce-Eccc
Confidence 99999999999999999999999999999999999999998766542 12222222 2458
Q ss_pred ccccccCccccCC
Q 006930 611 FGAGHVNLDRAMD 623 (625)
Q Consensus 611 ~G~G~ld~~~Al~ 623 (625)
||||+||+.+||+
T Consensus 412 yGfG~vDA~~aV~ 424 (600)
T 3hjr_A 412 YGFGLIDVNKALE 424 (600)
T ss_dssp TBTCBCCHHHHHH
T ss_pred cCCceecHHHHHH
Confidence 9999999998863
No 34
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=100.00 E-value=1.7e-44 Score=414.97 Aligned_cols=240 Identities=28% Similarity=0.366 Sum_probs=177.5
Q ss_pred CCCCCCccccchhhccccCCCCCcccccCccccccCCccceeeeeeccCCCCC--ChhhHHHHHHHHHH-----cCCCEE
Q 006930 216 RDADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKARLAVYKVCWKNAGC--FDSDILAAFDAAVN-----DGVDVI 288 (625)
Q Consensus 216 ~d~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~~~~--~~~~i~~ai~~a~~-----~~~~VI 288 (625)
.|++||||||||||||.. ++.+ +.||||+|+|+.+|+++...+. +..+++++|.+|++ ++++||
T Consensus 267 ~D~~GHGThVAGIIAa~~-N~~g--------~~GVAP~AkI~~vKVld~~~g~~~t~s~l~~AI~~Aid~a~~~~gadVI 337 (1354)
T 3lxu_X 267 GMSSPHGTHVSSIASGNH-SSRD--------VDGVAPNAKIVSMTIGDGRLGSMETGTALVRAMTKVMELCRDGRRIDVI 337 (1354)
T ss_dssp ECCCHHHHHHHHHHCCCC-SSSS--------SCCSCTTCEEEEEECBCTTTSSCBCHHHHHHHHHHHHHHHHTTCCCCEE
T ss_pred CCCCCcHHHHHHHHhcCC-CCCC--------ceeecCCCEEEEEEeccCCCCcccChHHHHHHHHHHHHHHhhcCCceEE
Confidence 478999999999999987 4322 3899999999999999874332 45677888888887 799999
Q ss_pred EeccCCCCCCCCCCCCChHHhhHHHhh-hCCcEEEEecCCCCCCCCc--ccCC--CCceEEeecCCCCCceeeEEEeCCC
Q 006930 289 SISIGGGDGISSPYYLDPIAIGSYGAA-SRGVFVSSSAGNDGPNGMS--VTNL--APWIVTVGAGTIDRNFPAEVRLGDG 363 (625)
Q Consensus 289 n~S~G~~~g~~~~~~~~~~~~~~~~a~-~~Gi~vV~AAGN~g~~~~~--~~~~--~~~vitVga~~~~~~~~~~~~~~~~ 363 (625)
|||||... .....+.+..++.++. ++|++||+||||+|.+... +++. ++++|+|||++........+..
T Consensus 338 NmS~G~~~---~~~~~~~l~~aI~~A~~~~GVlVVaAAGN~G~~~~ti~~PA~~ss~~VItVGAtd~~~~~~a~ys~--- 411 (1354)
T 3lxu_X 338 NMSYGEHA---NWSNSGRIGELMNEVVNKYGVVWVASAGNHGPALCTVGTPPDISQPSLIGVGAYVSPQMMEAEYAM--- 411 (1354)
T ss_dssp EECCCCCC---SCSSCCHHHHHHHHHHHTSCCEEEEECCSCCSSSSCCCTTTCSSSSCEEEEEEECCTTCCCC-------
T ss_pred EcCCccCC---CCCccHHHHHHHHHHHHhCCcEEEEeCCCCCCCCCccCCcccccCCceEEEEeecCCCCccccccc---
Confidence 99999983 3233556777777775 8999999999999986443 4553 8999999996543221000000
Q ss_pred eeeeeeecccCCCCCCceeeEEecCCCCCcccccccCCCCCCCccCceEEEEecCCCchhhHHHHHHHcCceEEEEEeCC
Q 006930 364 RRLSGVSLYAGAPLSEKMYPLIYPGKSGVLSASLCMENSLDPNLVRGKIVICDRGSSPRVAKGLVVKKAGGVGMILANGI 443 (625)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~i~~~~~g~~~~~~~~~~~~~~g~~g~~~~~~~ 443 (625)
T Consensus 412 -------------------------------------------------------------------------------- 411 (1354)
T 3lxu_X 412 -------------------------------------------------------------------------------- 411 (1354)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCccccCCCccCEEEeChhhHHHHHHHHHcCCCCeEEEEecceeecCcCCCcccccCCCCCCCCCCCCCCCccccCCC
Q 006930 444 SNGEGLVGDAHLLPACALGSDEGDAVKAYISSTANPTATIDFKGTILGIKPAPVVASFSARGPNGLNPEILKPDLIAPGV 523 (625)
Q Consensus 444 ~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPdi~APG~ 523 (625)
.....+.+++|||+||+.+ ++.||||+|||+
T Consensus 412 -----------------------------------------------~~~~~g~~asFSS~GPt~d--g~~KpDIaAPG~ 442 (1354)
T 3lxu_X 412 -----------------------------------------------REKLPGNVYTWTSRDPCID--GGQGVTVCAPGG 442 (1354)
T ss_dssp -----------------------------------------------------CCCCCCCCSCCSS--SSCCEEEEEEC-
T ss_pred -----------------------------------------------ccCCCCccccccCCCCCcc--CCCcceEEecCc
Confidence 0001247899999999987 899999999999
Q ss_pred cEEeeecCCCCCCCCCCCcccccccccCchhhhHHHHHHHHHHHHH----hCCCCCHHHHHHHHHhccccccCCCCCCcc
Q 006930 524 NILAAWTEAVGPTGLDSDLRKTEFNILSGTSMACPHVSGAAALLKS----AHPDWSPAAIRSAMMTTASIVDNSNQPMTD 599 (625)
Q Consensus 524 ~i~s~~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~----~~p~lt~~~vk~~L~~tA~~~~~~~~~~~~ 599 (625)
+|.++...... .|..++|||||||+|||++|||++ .+|++++++||++|++||+++..
T Consensus 443 ~I~St~~~~~~-----------~y~~~SGTSmAAP~VAGvAALLLSalkq~~P~LTp~qVk~lL~~TA~~~~~------- 504 (1354)
T 3lxu_X 443 AIASVPQFTMS-----------KSQLMNGTSMAAPHVAGAVALLISGLKQQNIEYSPYSIKRAISVTATKLGY------- 504 (1354)
T ss_dssp -------------------------CCCCGGGCHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHTTSBCCTT-------
T ss_pred eEEEeecCCCC-----------ceecCCCCCHHHHHHHHHHHHHHHhhHhhCCCCCHHHHHHHHHHhCccCCC-------
Confidence 99998654322 789999999999999999999987 79999999999999999998753
Q ss_pred CCCCCCCCCCcccccccCccccCC
Q 006930 600 EATGNASTPYDFGAGHVNLDRAMD 623 (625)
Q Consensus 600 ~~~~~~~~~~~~G~G~ld~~~Al~ 623 (625)
..+..||||+||+.+|++
T Consensus 505 ------~~~~~~G~GlLDa~~AV~ 522 (1354)
T 3lxu_X 505 ------VDPFAQGHGLLNVEKAFE 522 (1354)
T ss_dssp ------SCTTTSSSSBCCHHHHHH
T ss_pred ------CCcccccCCEeCHHHHHH
Confidence 234589999999999975
No 35
>1t1e_A Kumamolisin; proenzyme, prosubtilase, activation mechanism, sedolisin, serine-carboxyl proteinase, hydrolase; 1.18A {Bacillus SP} SCOP: c.41.1.2 d.58.3.2 PDB: 1t1g_A 1t1i_A 1gt9_1 1gtg_1 1gtj_1* 1gtl_1* 1sio_A* 1sn7_A 1zvj_A 1siu_A 1zvk_A
Probab=99.93 E-value=5.1e-27 Score=256.22 Aligned_cols=96 Identities=28% Similarity=0.467 Sum_probs=76.9
Q ss_pred ccccCCccceeeeeeccCCCCCChhhHHHHHHHHHH---cCCCEEEeccCCCCCCCCCC---CCChHHhhHHHhhhCCcE
Q 006930 247 AKGVAPKARLAVYKVCWKNAGCFDSDILAAFDAAVN---DGVDVISISIGGGDGISSPY---YLDPIAIGSYGAASRGVF 320 (625)
Q Consensus 247 ~~GvAP~A~l~~~kv~~~~~~~~~~~i~~ai~~a~~---~~~~VIn~S~G~~~g~~~~~---~~~~~~~~~~~a~~~Gi~ 320 (625)
+.||||+|+|+.+++.+ ..++++++|+|+++ ++++|||||||... ..+ +...+..++.++..+|++
T Consensus 274 ~~gvAp~a~i~~~~~~~-----~~~~~~~ai~~av~~~~~~~~VIS~S~G~~e---~~~~~~~~~~~~~~~~~a~~~Gi~ 345 (552)
T 1t1e_A 274 AGALAPGAKIAVYFAPN-----TDAGFLNAITTAVHDPTHKPSIVSISWGGPE---DSWAPASIAAMNRAFLDAAALGVT 345 (552)
T ss_dssp HHHHCTTSEEEEEECCS-----SHHHHHHHHHHHHTCTTTCCSEEEECEEEEG---GGSCHHHHHHHHHHHHHHHHTTCE
T ss_pred hhccCCCCeEEEEEcCC-----CCchHHHHHHHHHhcccCCCCEEEecccCCc---ccCCHHHHHHHHHHHHHHHhCCeE
Confidence 47999999999999732 35679999999998 79999999999873 211 123456666778899999
Q ss_pred EEEecCCCCCCC--------CcccCCCCceEEeecCCC
Q 006930 321 VSSSAGNDGPNG--------MSVTNLAPWIVTVGAGTI 350 (625)
Q Consensus 321 vV~AAGN~g~~~--------~~~~~~~~~vitVga~~~ 350 (625)
||+||||+|... ..+++.+|+|++||+++.
T Consensus 346 vv~AsGd~G~~~~~~~~~~~~~~PAs~P~V~aVGat~~ 383 (552)
T 1t1e_A 346 VLAAAGDSGSTDGEQDGLYHVDFPAASPYVLACGGTRL 383 (552)
T ss_dssp EEEECCSBGGGTTCCSSSCCCEETTTSTTSEEEEEEEE
T ss_pred EEEecCCCCCCCCCCCCcccccCcccCCCEEEEecccc
Confidence 999999999643 356788999999999754
No 36
>1ga6_A Serine-carboxyl proteinase; serine-carboxyl proteinase, hydrolase-hydrolase inhibitor CO; 1.00A {Pseudomonas SP} SCOP: c.41.1.2 PDB: 1ga4_A* 1ga1_A 1kdv_A* 1kdy_A* 1kdz_A* 1ke1_A* 1ke2_A* 1nlu_A*
Probab=99.87 E-value=1.6e-22 Score=210.29 Aligned_cols=102 Identities=21% Similarity=0.237 Sum_probs=78.9
Q ss_pred cccCCccceeeeeeccCCCCCChhhHHHHHHHHHH-cCCCEEEeccCCCCCC-CCCCCCChHHhhHHHhhhCCcEEEEec
Q 006930 248 KGVAPKARLAVYKVCWKNAGCFDSDILAAFDAAVN-DGVDVISISIGGGDGI-SSPYYLDPIAIGSYGAASRGVFVSSSA 325 (625)
Q Consensus 248 ~GvAP~A~l~~~kv~~~~~~~~~~~i~~ai~~a~~-~~~~VIn~S~G~~~g~-~~~~~~~~~~~~~~~a~~~Gi~vV~AA 325 (625)
..+||+++++.+++.+. .....++++++|+|+++ ++++|||||||..... ....+...+..++.++..+|++||+||
T Consensus 90 g~~aP~a~~~~~~~~~~-~~~~~~~~~~ai~~av~~~~~~ViS~S~G~~e~~~~~~~~~~~~~~~~~~a~~~Gitvv~As 168 (372)
T 1ga6_A 90 GSAGGAVQQLLFYMADQ-SASGNTGLTQAFNQAVSDNVAKVINVSLGWCEADANADGTLQAEDRIFATAAAQGQTFSVSS 168 (372)
T ss_dssp HHTTSCEEEEEEEEECT-TSSTTHHHHHHHHHHHHHCCCSEEEECCCEEHHHHHHTTHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred hhcCCCCcEEEEEeCCC-CCcccHHHHHHHHHHHhcCCCCEEEeCCCCCCCCCchHHHHHHHHHHHHHHHhCCcEEEEEE
Confidence 35799999999999865 33567789999999998 8999999999986200 001122456666777888999999999
Q ss_pred CCCCCCCC-------------cccCCCCceEEeecCCC
Q 006930 326 GNDGPNGM-------------SVTNLAPWIVTVGAGTI 350 (625)
Q Consensus 326 GN~g~~~~-------------~~~~~~~~vitVga~~~ 350 (625)
||+|...+ .+|+.+|+|++||+++.
T Consensus 169 Gd~G~~~~~~~g~~~~~~~~~~~PAs~P~V~aVGat~~ 206 (372)
T 1ga6_A 169 GDEGVYECNNRGYPDGSTYSVSWPASSPNVIAVGGTTL 206 (372)
T ss_dssp CSBTTBTTTTTTCCCTTCCBCEETTTCTTSEEEEEEEE
T ss_pred CCCCCccccccCccCCccCCcCCCCCCCCeEEEEeeec
Confidence 99997643 45678899999999764
No 37
>3edy_A Tripeptidyl-peptidase 1; protease, TPP1, sedolisin, batten disease, lincl, zymogen, P exopeptidase, endopeptidase, S53 family, CLN2; HET: NAG; 1.85A {Homo sapiens} PDB: 3ee6_A*
Probab=99.13 E-value=7.8e-11 Score=127.58 Aligned_cols=101 Identities=19% Similarity=0.219 Sum_probs=62.5
Q ss_pred cccCCccceeeeeeccCCCCCChhhHHHHHHHHHH--cCCCEEEeccCCCCCCCCCCCCChHHhhHHHhhhCCcEEEEec
Q 006930 248 KGVAPKARLAVYKVCWKNAGCFDSDILAAFDAAVN--DGVDVISISIGGGDGISSPYYLDPIAIGSYGAASRGVFVSSSA 325 (625)
Q Consensus 248 ~GvAP~A~l~~~kv~~~~~~~~~~~i~~ai~~a~~--~~~~VIn~S~G~~~g~~~~~~~~~~~~~~~~a~~~Gi~vV~AA 325 (625)
.+++++..++.+...+. ......+++.+++... +.++|||+|||.........+...+...+.++..+||.|++|+
T Consensus 262 ~a~~~~i~~~~~~~~g~--~~~~e~~l~~l~~l~~~~~~~~ViS~S~G~~e~~~~~~y~~~~~~~~~~~~~~Gitv~~AS 339 (544)
T 3edy_A 262 MSAGANISTWVYSSPGR--HEGQEPFLQWLMLLSNESALPHVHTVSYGDDEDSLSSAYIQRVNTELMKAAARGLTLLFAS 339 (544)
T ss_dssp HHHSTTSEEEEECCCSC--CTTCCHHHHHHHHHTTCSSCCSEEEEECCEEGGGSCHHHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred hccCCCceEEEEecCCc--ccccccHHHHHHHHhccCCCCcEEEecCCCcccccCHHHHHHHHHHHHHHHhCCeEEEEec
Confidence 34455555554433211 1112334444444332 4688999999987311111122345555667889999999999
Q ss_pred CCCCCCC----------CcccCCCCceEEeecCCC
Q 006930 326 GNDGPNG----------MSVTNLAPWIVTVGAGTI 350 (625)
Q Consensus 326 GN~g~~~----------~~~~~~~~~vitVga~~~ 350 (625)
||+|... ..+++.+|+|++||+++.
T Consensus 340 GD~G~~~~~~~~~~~~~~~~Pas~P~VtaVGgT~l 374 (544)
T 3edy_A 340 GDSGAGCWSVSGRHQFRPTFPASSPYVTTVGGTSF 374 (544)
T ss_dssp CSSTTBCEEETTEEECCCEETTTCTTSEEEEEEEE
T ss_pred CCCCccccCCCCCccccCCCcCCCCcEEEEeeeec
Confidence 9999642 246688999999999764
No 38
>3cnq_P Subtilisin BPN'; uncleaved, proenzyme, substrate complex, hydrolase, metal- binding, protease, secreted, serine protease, sporulation; 1.71A {Bacillus amyloliquefaciens} PDB: 3bgo_P 3co0_P 1spb_P 1scj_B
Probab=98.89 E-value=2.5e-09 Score=85.32 Aligned_cols=74 Identities=19% Similarity=0.205 Sum_probs=57.8
Q ss_pred CCCcceEEEEeCCCCCCCCcchhhhhhhhhcC-CCceEEEEeccceeeEEEEeCHHHHHHHhCCCCeeEEEecccccccc
Q 006930 32 DQTVKTFIFRIDSQSKPSIFPTHYHWYSSEFA-SPVQILHTYDTVFHGFSATLSPDQAASLSRHPSVLAVIEDQRRQLHT 110 (625)
Q Consensus 32 ~~~~~~yiV~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~p~V~~v~~~~~~~~~~ 110 (625)
...+++|||.||++...+.+ + ++.++ .+.++.++|.. |+||+++++++++++|+++|+|++||++..+++..
T Consensus 5 ~~i~~~YIV~~k~~~~~~~~--~----~~~~~~~g~~i~~~y~~-~~Gfaa~l~~~~~~~L~~~p~V~~Ve~D~~v~~~t 77 (80)
T 3cnq_P 5 SNGEKKYIVGFKQGFKSCAK--K----EDVISEKGGKLQKCFKY-VDAASATLNEKAVEELKKDPSVAYVEEDKLYRALS 77 (80)
T ss_dssp ---CCEEEEEECTTCCSHHH--H----HHHHHTTTCEEEEECSS-SSEEEEECCHHHHHHHHTCTTEEEEEECCEEEECC
T ss_pred ccCCCCEEEEECCCCChHHH--H----HHHHHHcCCcceEEEcc-cEEEEEEcCHHHHHHHHhCCCccEEEeCcEEEEee
Confidence 44689999999998764321 1 12222 27899999998 99999999999999999999999999999998865
Q ss_pred CC
Q 006930 111 TR 112 (625)
Q Consensus 111 ~~ 112 (625)
+.
T Consensus 78 t~ 79 (80)
T 3cnq_P 78 AT 79 (80)
T ss_dssp C-
T ss_pred ec
Confidence 43
No 39
>2w2n_P Proprotein convertase subtilisin/kexin type 9; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2m_P 2w2o_P 2w2p_P 2w2q_P 2xtj_P
Probab=98.86 E-value=1e-09 Score=93.57 Aligned_cols=77 Identities=18% Similarity=0.185 Sum_probs=65.8
Q ss_pred CCCcceEEEEeCCCCCCCCcchhhhhhhhhcCC---CceEEEEeccceeeEEEEeCHHHHHHHhCCCCeeEEEecccccc
Q 006930 32 DQTVKTFIFRIDSQSKPSIFPTHYHWYSSEFAS---PVQILHTYDTVFHGFSATLSPDQAASLSRHPSVLAVIEDQRRQL 108 (625)
Q Consensus 32 ~~~~~~yiV~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~p~V~~v~~~~~~~~ 108 (625)
...+++|||.||++........|.+++.+.+.+ +.++.++|.+.|+||+++++++++++|+++|+|.+||+++.++.
T Consensus 34 ~~ip~~YIV~lk~~~~~~~~~~h~~~l~s~~~~~~~~~~i~~sY~~~~~GFaa~Lt~~~~~~L~~~P~V~~VE~D~~v~~ 113 (114)
T 2w2n_P 34 WRLPGTYVVVLKEETHLSQSERTARRLQAQAARRGYLTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEEDSSVFA 113 (114)
T ss_dssp GEEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTCCCEEEEEECSSSSEEEEECCGGGHHHHHTSTTEEEEEEEEEEEE
T ss_pred cCCCCcEEEEECCCCCHHHHHHHHHHHHHHhhhcccCCceEEEecccceEEEEEcCHHHHHHHHcCCCccEEEeCceEec
Confidence 346899999999987655566777888775543 57999999999999999999999999999999999999988764
No 40
>2qtw_A Proprotein convertase subtilisin/kexin type 9 Pro; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_A 2pmw_A 3h42_A 3bps_P 3gcw_P 3gcx_P 3p5b_P 3p5c_P
Probab=98.69 E-value=9.7e-09 Score=88.50 Aligned_cols=77 Identities=18% Similarity=0.178 Sum_probs=62.3
Q ss_pred CCCcceEEEEeCCCCCCCCcchhhhhhhhhcC---CCceEEEEeccceeeEEEEeCHHHHHHHhCCCCeeEEEecccccc
Q 006930 32 DQTVKTFIFRIDSQSKPSIFPTHYHWYSSEFA---SPVQILHTYDTVFHGFSATLSPDQAASLSRHPSVLAVIEDQRRQL 108 (625)
Q Consensus 32 ~~~~~~yiV~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~p~V~~v~~~~~~~~ 108 (625)
...+++|||.||++........+.+++.+.+. .+.++.++|++.|+||+++++++++++|+++|+|.+|+++..++.
T Consensus 44 ~~Ip~~YIV~~K~~~~~~~~~~~~~~l~~~~~~r~~g~~i~~~Y~~~~~GFaa~l~~~~~~~L~~~p~V~~VE~D~~v~a 123 (124)
T 2qtw_A 44 WRLPGTYVVVLKEETHLSQSERTARRLQAQAARRGYLTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEEDSSVFA 123 (124)
T ss_dssp GEEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTCCCEEEEEECSSSCEEEEECCGGGHHHHHTSTTEEEEEEEEEEEE
T ss_pred cCCCCCEEEEECCCCCHHHHHHHHHHHHHHHhhcccCCceEEEecccceEEEEEcCHHHHHHHHcCCCCcEEEeCceEec
Confidence 34589999999998875554445555544322 267999999999999999999999999999999999999988754
No 41
>1v5i_B POIA1, IA-1=serine proteinase inhibitor; protease-inhibitor complex, subtilisin, hydrolase-Pro binding complex; 1.50A {Pleurotus ostreatus} SCOP: d.58.3.2 PDB: 1itp_A
Probab=98.68 E-value=1.7e-08 Score=79.28 Aligned_cols=70 Identities=16% Similarity=0.212 Sum_probs=58.4
Q ss_pred ceEEEEeCCCCCCCCcchhhhhhhhhcCCCceEEEEec-cceeeEEEEeCHHHHHHHhCC--CCeeEEEecccccc
Q 006930 36 KTFIFRIDSQSKPSIFPTHYHWYSSEFASPVQILHTYD-TVFHGFSATLSPDQAASLSRH--PSVLAVIEDQRRQL 108 (625)
Q Consensus 36 ~~yiV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~L~~~--p~V~~v~~~~~~~~ 108 (625)
+.|||.||++...+....+.+++... ++++.+.|+ ..|+||+++++++.+++|+++ |.|.+||++..++.
T Consensus 3 ~sYIV~lk~~~~~~~~~~~~~~~~~~---gg~i~~~y~~~~~~Gfa~~~~~~~l~~l~~~~~p~V~~VE~D~~v~~ 75 (76)
T 1v5i_B 3 GKFIVIFKNDVSEDKIRETKDEVIAE---GGTITNEYNMPGMKGFAGELTPQSLTKFQGLQGDLIDSIEEDHVAHA 75 (76)
T ss_dssp EEEEEEECTTCCHHHHHHHHHHHHHH---TCCCCEEEEETTEEEEEEEECHHHHHHHHHTBTTTEEEEEECCEEEC
T ss_pred ceEEEEECCCCCHHHHHHHHHHHHhh---CCceEEEEEcCceeEEEEEcCHHHHHHHHhcCCCCCcEEcCCcEEeC
Confidence 68999999987765555555555543 578899994 799999999999999999999 89999999988754
No 42
>3icu_A E3 ubiquitin-protein ligase RNF128; E3 ligase, energy, PA domain, transmembrane,protein turnover conjugation pathway; HET: NAG; 2.10A {Homo sapiens}
Probab=98.55 E-value=5.6e-07 Score=83.23 Aligned_cols=94 Identities=15% Similarity=0.134 Sum_probs=75.1
Q ss_pred ccccccCCCCCCC-------ccCceEEEEecCC-CchhhHHHHHHHcCceEEEEEeCCCCCC---cccc-CCCccCEEEe
Q 006930 394 SASLCMENSLDPN-------LVRGKIVICDRGS-SPRVAKGLVVKKAGGVGMILANGISNGE---GLVG-DAHLLPACAL 461 (625)
Q Consensus 394 ~~~~c~~~~~~~~-------~~~g~i~~~~~g~-~~~~~~~~~~~~~g~~g~~~~~~~~~~~---~~~~-~~~~~p~~~i 461 (625)
..+.|.+..+... ..+++|+|++||. |.|.+|..+++++||.++|++|+...+. .+.. ....||++.|
T Consensus 82 ~~~GC~~~~~~~~~~~~~~~~~~gkIaLV~RG~~CsF~~Kv~nAq~aGA~avIIyNn~~~g~~~~~m~~~~~~~IPsv~I 161 (194)
T 3icu_A 82 ALNACNPHTNFTVPTVWGSTVQVSWLALIQRGGGCTFADKIHLAYERGASGAVIFNFPGTRNEVIPMSHPGAVDIVAIMI 161 (194)
T ss_dssp CTTCCSTTCCBCCCBCTTSSCBCCEEEEEESCTTCCHHHHHHHHHHTTCSEEEEECCTTCTTCCCCCCCTTCCSSEEEEE
T ss_pred CcCCCCCCccccCCcccccccCCCeEEEEECCCCcCHHHHHHHHHHCCCcEEEEEeCCCCCCceeeecCCCCCceeEEEE
Confidence 5678988764322 2578999999999 9999999999999999999999853221 1211 2357999999
Q ss_pred ChhhHHHHHHHHHcCCCCeEEEEecc
Q 006930 462 GSDEGDAVKAYISSTANPTATIDFKG 487 (625)
Q Consensus 462 ~~~~~~~l~~~~~~~~~~~~~~~~~~ 487 (625)
+..+|+.|++++.++..+++++.+..
T Consensus 162 s~~~G~~L~~~L~~G~~Vtvti~vg~ 187 (194)
T 3icu_A 162 GNLKGTKILQSIQRGIQVTMVIEVGK 187 (194)
T ss_dssp CHHHHHHHHHHHHTTCCEEEEEEEEE
T ss_pred CHHHHHHHHHHHHCCCeEEEEEECCC
Confidence 99999999999999988888877654
No 43
>2z30_B TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 2z2y_B 3a3p_B 2z56_B 2z58_B 2z57_B 3a3n_B 3a3o_B
Probab=98.00 E-value=1.1e-05 Score=61.00 Aligned_cols=61 Identities=15% Similarity=0.197 Sum_probs=50.6
Q ss_pred ceEEEEeCCCCCCCCcchhhhhhhhhcCC-CceEEEEeccceeeEEEEeCHHHHHHHhCCCCeeEEEeccccc
Q 006930 36 KTFIFRIDSQSKPSIFPTHYHWYSSEFAS-PVQILHTYDTVFHGFSATLSPDQAASLSRHPSVLAVIEDQRRQ 107 (625)
Q Consensus 36 ~~yiV~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~p~V~~v~~~~~~~ 107 (625)
.+|||.|+++.. ..+.++. ++++.++|. .++++++++|++.++.|+++|+|++|++|..++
T Consensus 2 ~~~IV~f~~~~~----------~~~~i~~~gG~i~~~~~-~I~a~~~~lp~~~~~~L~~~p~V~yVE~D~~v~ 63 (65)
T 2z30_B 2 IRVIVSVDKAKF----------NPHEVLGIGGHIVYQFK-LIPAVVVDVPANAVGKLKKMPGVEKVEFDHQAV 63 (65)
T ss_dssp EEEEEEECGGGC----------CGGGGGGGTCEEEEECS-SSSEEEEEECGGGHHHHHTSTTEEEEEECCEEE
T ss_pred eeEEEEEcCcch----------hHHHHHHCCCEEEEEec-CCcEEEEEeCHHHHHHHhcCCCceEEecCcEEE
Confidence 489999987622 1223333 899999998 799999999999999999999999999998765
No 44
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=95.73 E-value=0.089 Score=55.26 Aligned_cols=69 Identities=29% Similarity=0.389 Sum_probs=57.5
Q ss_pred CccCceEEEEecCCCchhhHHHHHHHcCceEEEEEeCCCCCCc--ccc-CCCccCEEEeChhhHHHHHHHHH
Q 006930 406 NLVRGKIVICDRGSSPRVAKGLVVKKAGGVGMILANGISNGEG--LVG-DAHLLPACALGSDEGDAVKAYIS 474 (625)
Q Consensus 406 ~~~~g~i~~~~~g~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~--~~~-~~~~~p~~~i~~~~~~~l~~~~~ 474 (625)
.+++|||++++++.|.+..+..++.++||.|+|++++...... +.. ....+|++.++..++..|...+.
T Consensus 111 ~dv~GkIvlv~~g~~~~~~k~~~A~~~GA~gvIi~~~~~~~~~g~~~~~~~~~IP~~~Is~~~a~~L~~~l~ 182 (421)
T 2ek8_A 111 KDLNGKIALIQRGNISFADKVRNAAKQGAKAVIIYNNTDGKLNGTLGGSDASFVAAVGITKQEGDALAANLR 182 (421)
T ss_dssp SCCTTSEEEEECCSSCHHHHHHHHHHTTCSEEEEECSSSSCCCCBCSSCCTTCCEEEEECHHHHHHHHHHHH
T ss_pred CCcCceEEEEeCCCCCHHHHHHHHHHCCCeEEEEEeCCCcccccccCCCCCCCccEEEeCHHHHHHHHHHhh
Confidence 4799999999999999999999999999999999988643221 111 34679999999999999999884
No 45
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=94.91 E-value=0.13 Score=54.38 Aligned_cols=103 Identities=12% Similarity=0.204 Sum_probs=70.9
Q ss_pred CCceeeEEecCCCCCcccccccCCCCCCCccCceEEEEecCCCc---------hhhH----HHHHHHcCceEEEEEeCCC
Q 006930 378 SEKMYPLIYPGKSGVLSASLCMENSLDPNLVRGKIVICDRGSSP---------RVAK----GLVVKKAGGVGMILANGIS 444 (625)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~i~~~~~g~~~---------~~~~----~~~~~~~g~~g~~~~~~~~ 444 (625)
...+-++++... ...|.. ....+++|||++++++.|. +..+ ..++.++||.|+|+++...
T Consensus 104 ~~vta~lV~v~~-----~~~~~~--~~~~dvkGKIVlv~~~~~~~~~~~~y~~~~~kr~~~a~~A~~aGA~avIi~~~~~ 176 (444)
T 3iib_A 104 QGLSATIVRFDT-----LQDLQN--AEAGSLNDKIAFIDAKTERHRDGKGYGQTASGRSRGAVAAAEKGAVGIIIRSIGT 176 (444)
T ss_dssp TCEEEEEEEESS-----HHHHHT--SCTTTTTTCEEEECCCCCCCTTCHHHHHHHHHHHHHHHHHHHTTCSEEEEECSCS
T ss_pred CCeEEEEEecCC-----HHHHhh--ccccccCccEEEEeCCCCCCcccccccchhhhhhhHHHHHHHCCCeEEEEEccCC
Confidence 345667777532 222332 2356899999999998884 3333 3568999999999998654
Q ss_pred CCCc--------cccCCCccCEEEeChhhHHHHHHHHHcCCCCeEEEEecc
Q 006930 445 NGEG--------LVGDAHLLPACALGSDEGDAVKAYISSTANPTATIDFKG 487 (625)
Q Consensus 445 ~~~~--------~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~ 487 (625)
.... +......+|++.|+..++..|...+..+...++++....
T Consensus 177 ~~~~~~~tg~~~~~~~~~~IP~~~Is~~da~~L~~~l~~g~~~~v~l~~~~ 227 (444)
T 3iib_A 177 DHDRMAHTGMMRYEEGVTAIPAAAISNPDADLINAMLKRDKEVVISLELGS 227 (444)
T ss_dssp CCSSCCCCCBCCCCTTSCCCCEEEECHHHHHHHHHHHTTTCCCEEEEEEEE
T ss_pred cccccccCCccccCCCCCCCCeEEecHHHHHHHHHHHhCCCCeEEEEEEee
Confidence 3211 111235799999999999999999988776666666543
No 46
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=93.78 E-value=0.14 Score=56.43 Aligned_cols=69 Identities=13% Similarity=0.166 Sum_probs=55.0
Q ss_pred CccCceEEEEecCCCchhhHHHHHHHcCceEEEEEeCCCCCC------------------ccc----------------c
Q 006930 406 NLVRGKIVICDRGSSPRVAKGLVVKKAGGVGMILANGISNGE------------------GLV----------------G 451 (625)
Q Consensus 406 ~~~~g~i~~~~~g~~~~~~~~~~~~~~g~~g~~~~~~~~~~~------------------~~~----------------~ 451 (625)
-+++|||+++++|.|.+..|..++.++||.|+|++++..... .+. .
T Consensus 128 vdv~GkIvlv~~g~~~~~~K~~~A~~~GA~gvii~~~~~~~~~~~~~~~~~G~~~~~~Gdp~tpg~ps~~~~~~~~~~~~ 207 (640)
T 3kas_A 128 TPVNGSIVIVRAGKITFAEKVANAESLNAIGVLIYMDQTKFPIVNAELSFFGHAHLGTGDPYTPGFPSFNHTQFPPSRSS 207 (640)
T ss_dssp SCCTTSEEEEESCSSCHHHHHHHHHTTTCSEEEEECCTTTCCCSCTTCCCCEECCSSSSCSCCCSSCC---CCCCCCSSC
T ss_pred cccCCcEEEEecCCCCHHHHHHHHHHCCCeEEEEEeccccccccccccccccccccCCCCCCCCCccccccccccccccc
Confidence 479999999999999999999999999999999998754210 000 0
Q ss_pred CCCccCEEEeChhhHHHHHHHHH
Q 006930 452 DAHLLPACALGSDEGDAVKAYIS 474 (625)
Q Consensus 452 ~~~~~p~~~i~~~~~~~l~~~~~ 474 (625)
....||++.|+..++..|+..+.
T Consensus 208 ~~p~IP~~~Is~~~a~~Ll~~l~ 230 (640)
T 3kas_A 208 GLPNIPVQTISRAAAEKLFGNME 230 (640)
T ss_dssp CCCSSCEEECCHHHHHHHHTTEE
T ss_pred CCCCCCEEecCHHHHHHHHHHcc
Confidence 02368999999999999987654
No 47
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=91.66 E-value=0.32 Score=54.22 Aligned_cols=70 Identities=24% Similarity=0.364 Sum_probs=55.4
Q ss_pred CccCceEEEEecCCCchhhHHHHHHHcCceEEEEEeCCCC----C--------------C---cc-----cc--------
Q 006930 406 NLVRGKIVICDRGSSPRVAKGLVVKKAGGVGMILANGISN----G--------------E---GL-----VG-------- 451 (625)
Q Consensus 406 ~~~~g~i~~~~~g~~~~~~~~~~~~~~g~~g~~~~~~~~~----~--------------~---~~-----~~-------- 451 (625)
.+++|+|+++++|.|.+.+|..+++++||.|+|++++... + . .+ ..
T Consensus 151 ~~v~GkIvlv~~G~~~~~~Kv~~A~~~GA~gviiy~dp~d~~~~g~~~yP~~~~~p~~~vqrGsv~~~~~~GDp~TPG~p 230 (707)
T 3fed_A 151 INCTGKIVIARYGKIFRGNKVKNAMLAGAIGIILYSDPADYFAPEVQPYPKGWNLPGTAAQRGNVLNLNGAGDPLTPGYP 230 (707)
T ss_dssp CCCTTCEEEEECCSSCHHHHHHHHHHTTCSEEEEECCHHHHCCTTCCBTTTSSBCCTTCCCCCCCCCCTTCCSTTCTTSC
T ss_pred CCCCCeEEEEECCCCCHhHHHHHHHHCCCEEEEEEcCchhccccccccCCCCccCCCccccccceecccCCCCCCCCCCc
Confidence 4799999999999999999999999999999999986320 0 0 00 00
Q ss_pred --------------CCCccCEEEeChhhHHHHHHHHHc
Q 006930 452 --------------DAHLLPACALGSDEGDAVKAYISS 475 (625)
Q Consensus 452 --------------~~~~~p~~~i~~~~~~~l~~~~~~ 475 (625)
....||++.|+..++..|+..+..
T Consensus 231 s~~~~~r~~~~~~~~~p~IP~~pIS~~da~~Ll~~l~g 268 (707)
T 3fed_A 231 AKEYTFRLDVEEGVGIPRIPVHPIGYNDAEILLRYLGG 268 (707)
T ss_dssp CCTTCCCCCGGGCTTCCSSCEEEECHHHHHHHHHTBCB
T ss_pred ccCCCcccChhhccCCCCCCeEecCHHHHHHHHHHhcC
Confidence 024789999999999999987654
No 48
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=88.28 E-value=0.31 Score=57.40 Aligned_cols=25 Identities=32% Similarity=0.582 Sum_probs=22.9
Q ss_pred CCCCCccEEEEcccccCCCCCCCCC
Q 006930 129 SDYGSDVIIGVFDTGIWPERRSFSD 153 (625)
Q Consensus 129 ~~tG~gv~VaVIDtGid~~Hp~f~~ 153 (625)
.+.|+||+|||+|||||+.+|-|+-
T Consensus 32 ~ydGrgv~iai~DtGVDP~a~glq~ 56 (1354)
T 3lxu_X 32 EYDGRDVTIAIFDSGVDPRATGLET 56 (1354)
T ss_dssp TCSSTTCEEEEEESCCCTTSTTSSC
T ss_pred CCCCCccEEEEEeCCCCCCCCccee
Confidence 5789999999999999999999973
No 49
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=83.37 E-value=0.42 Score=50.38 Aligned_cols=31 Identities=26% Similarity=0.255 Sum_probs=26.4
Q ss_pred CCCcccccCCCCCCCCCCCCCCCccccCCCcEEeeecCC
Q 006930 494 PAPVVASFSARGPNGLNPEILKPDLIAPGVNILAAWTEA 532 (625)
Q Consensus 494 ~~~~~a~fSs~Gp~~~~~~~~KPdi~APG~~i~s~~~~~ 532 (625)
..+.++.||++|+.. ||+|||+.|.++++.+
T Consensus 182 ~~~~~~~~S~~g~~v--------dv~ApG~~i~s~~~~g 212 (441)
T 1y9z_A 182 SNLDHAAFSQYTDQV--------EISGPGEAILSTVTVG 212 (441)
T ss_dssp TTCCBCTTSCCCTTE--------EEEEECSSEEEECSTT
T ss_pred CCCCCCccccCCCce--------EEEeccCCeeccccCC
Confidence 345789999999876 9999999999998743
No 50
>1wgl_A TOLL-interacting protein; CUE domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, immune system; NMR {Homo sapiens} SCOP: a.5.2.4
Probab=40.19 E-value=11 Score=27.10 Aligned_cols=30 Identities=13% Similarity=0.193 Sum_probs=24.7
Q ss_pred HHHHHHHHHhCCCCCHHHHHHHHHhccccc
Q 006930 561 SGAAALLKSAHPDWSPAAIRSAMMTTASIV 590 (625)
Q Consensus 561 AG~aALl~~~~p~lt~~~vk~~L~~tA~~~ 590 (625)
--.+..|++.||+++...|+..|...--.+
T Consensus 10 ee~l~~L~emFP~ld~~~I~~vL~a~~gdv 39 (59)
T 1wgl_A 10 EEDLKAIQDMFPNMDQEVIRSVLEAQRGNK 39 (59)
T ss_dssp HHHHHHHHHHCSSSCHHHHHHHHTTTTTCH
T ss_pred HHHHHHHHHHCCCCCHHHHHHHHHHcCCCH
Confidence 345678899999999999999998776554
No 51
>1ni7_A ER75, hypothetical protein YGDK; RD-structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Escherichia coli} SCOP: d.224.1.1
Probab=39.67 E-value=23 Score=31.02 Aligned_cols=34 Identities=24% Similarity=0.192 Sum_probs=28.1
Q ss_pred cccCchhhhHHHHHHHHHHHHHhCCCCCHHHHHHH
Q 006930 548 NILSGTSMACPHVSGAAALLKSAHPDWSPAAIRSA 582 (625)
Q Consensus 548 ~~~sGTSmAaP~VAG~aALl~~~~p~lt~~~vk~~ 582 (625)
..+.|-| =|++|-|++||+++.+-..||+||.+.
T Consensus 77 l~F~adS-DA~IvkGL~AlL~~~~~G~tp~eIl~~ 110 (155)
T 1ni7_A 77 MHFFGDS-EGRIVRGLLAVLLTAVEGKTAAELQAQ 110 (155)
T ss_dssp CCCEEEE-SSHHHHHHHHHHHHHTTTCCHHHHHHS
T ss_pred EEEeeCC-ccHHHHHHHHHHHHHHcCCCHHHHHhC
Confidence 4455655 479999999999999999999998764
No 52
>3g0m_A Cysteine desulfuration protein SUFE; YNHA, csgid, national I of allergy and infectious diseases, niaid, hydrolase, struc genomics; 1.76A {Salmonella typhimurium LT2} SCOP: d.224.1.1 PDB: 1mzg_A
Probab=34.76 E-value=22 Score=30.62 Aligned_cols=34 Identities=21% Similarity=0.143 Sum_probs=28.5
Q ss_pred ccccCchhhhHHHHHHHHHHHHHhCCCCCHHHHHH
Q 006930 547 FNILSGTSMACPHVSGAAALLKSAHPDWSPAAIRS 581 (625)
Q Consensus 547 y~~~sGTSmAaP~VAG~aALl~~~~p~lt~~~vk~ 581 (625)
-..+.|.| =|++|-|++||+++.+-..||+||.+
T Consensus 69 ~l~f~adS-DA~IvkGl~alL~~~~~G~tp~eIl~ 102 (141)
T 3g0m_A 69 IIELQGDS-DAAIVKGLMAVVFILYHQMTAQDIVH 102 (141)
T ss_dssp BEEEEEEE-SSHHHHHHHHHHHHHHTTCBHHHHHH
T ss_pred EEEEEecC-ccHHHHHHHHHHHHHHcCCCHHHHHh
Confidence 35566666 47999999999999999999999865
No 53
>1otr_A Protein CUE2; protein-protein complex, cell cycle; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.4
Probab=20.50 E-value=99 Score=21.11 Aligned_cols=26 Identities=12% Similarity=0.234 Sum_probs=21.9
Q ss_pred HHHHHHhCCCCCHHHHHHHHHhcccc
Q 006930 564 AALLKSAHPDWSPAAIRSAMMTTASI 589 (625)
Q Consensus 564 aALl~~~~p~lt~~~vk~~L~~tA~~ 589 (625)
+.+|.+-||+.+..+||..|...--+
T Consensus 8 v~~L~EMFP~~~~~~ik~~L~~~~Gd 33 (49)
T 1otr_A 8 LSILMDMFPAISKSKLQVHLLENNND 33 (49)
T ss_dssp HHHHHHHCSSSCHHHHHHHHHHTTTC
T ss_pred HHHHHHHCCCCCHHHHHHHHHHcCCC
Confidence 56889999999999999999876443
No 54
>1wlo_A SUFE protein; structural genomics, riken structural genomics/proteomics in RSGI, unknown function; NMR {Thermus thermophilus}
Probab=20.03 E-value=33 Score=29.27 Aligned_cols=33 Identities=24% Similarity=0.263 Sum_probs=26.9
Q ss_pred cccCchhhhHHHHHHHHHHHHHhCCCCCHHHHHH
Q 006930 548 NILSGTSMACPHVSGAAALLKSAHPDWSPAAIRS 581 (625)
Q Consensus 548 ~~~sGTSmAaP~VAG~aALl~~~~p~lt~~~vk~ 581 (625)
..+.|-| =|++|-|.+||+++.+-..||+||.+
T Consensus 64 l~f~~dS-DA~IvkGl~alL~~~~~G~tp~eIl~ 96 (136)
T 1wlo_A 64 LYFHVPD-EAPTVKAFAGLLREGLEGESPEAVLE 96 (136)
T ss_dssp EEEECSS-CCHHHHHHHHHHHHTTTTCCTTTTTS
T ss_pred EEEecCC-ccHHHHHHHHHHHHHHcCCCHHHHHh
Confidence 4455666 47999999999999999999988754
Done!