Your job contains 1 sequence.
>006936
MPGGCSIRALWILNNFDAVVFSRRFPVVERRWREACKTENESCIEDPIKYNVLPLVPTDS
ELASAFAERKRREGSVRGFGVRVSQSTEGSDSWVDDPITRHVIGLYIDTEEGGENHLLWP
LILHVKGPYCILVLPQVEPRHLKAYARLCKKSDCGNAVGVDDSLSSLLLDLPSITGAFMV
AHAIGDIITGDVVEPEVVVSASPSVGGLLDSLTGSIGISGISSRAKPVAAPVASTAPSGA
AAVGTVASDAPKLGSRPLEKDALRSFISSAMPFGTPVDLSYSNIFAIKVNGFPSSELPPQ
DLKQPAWKPYLYKGKQRLLFTIHETVHAAMYDRDEIPDSLSVSGQINCRAELEGMPDVSF
PLTGLNSAHVEVLSFHPSAQVPEQGVDKQAVMFSPPLGNFVLMRYQAICGLGPPVKGFYQ
LSMVSEDEGAFLFKLCLMESYKAPLTMEFCNVTMLFPRRRVVSFDGTPSIGTVSNNEHSV
EWKIMTSGRALTGRSLEATFPGTVKFAPWQTQRSSSGGTVDEDSDIETDNTNNVVNIEEF
LMEKMNMDLPPVDLEEPFCWQAYNYAKVSFKIIGASISGMSIDPKSVSIYPAVKAPVEFS
AQVTSGDYILWNTLGKCPSVATAKT
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 006936
(625 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2051436 - symbol:AT2G20790 species:3702 "Arabi... 2043 2.4e-211 1
DICTYBASE|DDB_G0285113 - symbol:DDB_G0285113 "MHD domain-... 365 2.1e-34 2
UNIPROTKB|E1BXF7 - symbol:MUDENG "Uncharacterized protein... 188 2.7e-22 4
UNIPROTKB|Q4R6Q7 - symbol:AP5M1 "AP-5 complex subunit mu-... 198 2.7e-20 4
UNIPROTKB|Q9H0R1 - symbol:AP5M1 "AP-5 complex subunit mu-... 193 6.6e-20 4
UNIPROTKB|Q5E9X5 - symbol:AP5M1 "AP-5 complex subunit mu-... 193 2.1e-19 4
UNIPROTKB|F1SSM1 - symbol:AP5M1 "Uncharacterized protein"... 198 2.2e-19 4
UNIPROTKB|E2RAC5 - symbol:AP5M1 "Uncharacterized protein"... 194 2.7e-19 4
UNIPROTKB|E7EQ45 - symbol:AP5M1 "AP-5 complex subunit mu-... 193 3.5e-18 4
MGI|MGI:1921635 - symbol:Ap5m1 "adaptor-related protein c... 161 3.2e-17 5
ZFIN|ZDB-GENE-050522-231 - symbol:ap5m1 "adaptor-related ... 137 9.8e-17 4
RGD|1308087 - symbol:Ap5m1 "adaptor-related protein compl... 154 1.9e-14 4
RGD|70969 - symbol:Ap3m2 "adaptor-related protein complex... 123 0.00020 1
DICTYBASE|DDB_G0277901 - symbol:apm3 "clathrin-adaptor me... 125 0.00041 2
UNIPROTKB|E1B763 - symbol:AP3M2 "Uncharacterized protein"... 118 0.00071 1
UNIPROTKB|E5RJ52 - symbol:AP3M2 "AP-3 complex subunit mu-... 115 0.00076 1
>TAIR|locus:2051436 [details] [associations]
symbol:AT2G20790 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0006886 "intracellular
protein transport" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0030131 "clathrin adaptor complex"
evidence=IEA] InterPro:IPR008968 InterPro:IPR018240 Pfam:PF00928
PROSITE:PS00991 PROSITE:PS51072 GO:GO:0006886 EMBL:CP002685
GO:GO:0016192 GO:GO:0030131 SUPFAM:SSF49447 eggNOG:NOG330107
EMBL:AF462850 EMBL:AY090282 IPI:IPI00537300 RefSeq:NP_850004.1
UniGene:At.28257 ProteinModelPortal:Q8W0Z6 PaxDb:Q8W0Z6
PRIDE:Q8W0Z6 EnsemblPlants:AT2G20790.1 GeneID:816608
KEGG:ath:AT2G20790 TAIR:At2g20790 HOGENOM:HOG000030631
InParanoid:Q8W0Z6 OMA:CRAELEG PhylomeDB:Q8W0Z6
ProtClustDB:CLSN2690821 Genevestigator:Q8W0Z6 Uniprot:Q8W0Z6
Length = 613
Score = 2043 (724.2 bits), Expect = 2.4e-211, P = 2.4e-211
Identities = 392/624 (62%), Positives = 466/624 (74%)
Query: 1 MPGGCSIRALWILNNFDAVVFSRRFPVVERRWREACKTENESCIEDPIKYNVLPLVPTDS 60
MP GCSIRALWI+NN D VVFSRRFPVVE++W A KTENE+ D LP +PTD
Sbjct: 1 MPSGCSIRALWIINNQDTVVFSRRFPVVEKQWCSAYKTENENTGLD------LPRLPTDQ 54
Query: 61 ELASAFAERKRREGSVRGFGVRVSQSTEGSDSWVDDPITRHVIGLYI---DTEEGGENHL 117
+++ +F RKRREGS RG+G+RV+QST+GSDSWVDDPITRH+I L + D ++ E ++
Sbjct: 55 QISDSFTRRKRREGSTRGYGIRVAQSTKGSDSWVDDPITRHIISLCLTEEDDDDDDERNI 114
Query: 118 LWPLILHVKGPYCILVLPQVEPRHLKAYARLCKKSDCGNAVGVXXXXXXXXXXXPSITGA 177
LWP+ LH K Y ILVLP VEP+ +K Y +LC++SDCG AVG SITGA
Sbjct: 115 LWPIALHTKALYSILVLPLVEPKEMKDYVKLCRRSDCGPAVGEDLSLSSLLLNISSITGA 174
Query: 178 FMVAHAIGDIITGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAKXXXXXXXXXXX 237
FMVAHA GDII+GD RAK
Sbjct: 175 FMVAHAFGDIISGDTVEPEVVVSVSPSVGGLFDSLTGSIGISS---RAKPVAAPVASSNP 231
Query: 238 XXXXXXXXXXXXXXKLGSRPLEKDALRSFISSAMPFGTPVDLSYSNIFAIKVNGFPSSEL 297
K GSR L++D LR+FI++AMPFGTP+DLS SNI A+K NGF S++
Sbjct: 232 SGAAITGATASDAPKAGSRLLDRDLLRNFIATAMPFGTPLDLSLSNISAMKANGFSSADP 291
Query: 298 PPQDLKQPAWKPYLYKGKQRLLFTIHETVHAAMYDRDEIPDSLSVSGQINCRAELEGMPD 357
PPQ+LKQPAWKPYLYKGKQRLLFTIHETV AAMYDRDEIPD++SV+GQINCRAELEG+PD
Sbjct: 292 PPQELKQPAWKPYLYKGKQRLLFTIHETVSAAMYDRDEIPDNVSVAGQINCRAELEGLPD 351
Query: 358 VSFPLTGLNSAHVEVLSFHPSAQVPEQGVDKQAVMFSPPLGNFVLMRYQAICGLGPPVKG 417
VSFPL GL++AH+E +SFHP AQVP G+DKQ ++F PPLGNFVLMRYQA CGLGPPVKG
Sbjct: 352 VSFPLAGLSTAHIEAISFHPCAQVPAHGIDKQNIVFQPPLGNFVLMRYQAGCGLGPPVKG 411
Query: 418 FYQLSMVSEDEGAFLFKLCLMESYKAPLTMEFCNVTMLFPRRRVVSFDGTPSIGTVSNNE 477
FYQLSMVSEDEGAFLFK+ LME YKAPL+MEFC +TM FPRRR+V+FDGTPS GTV E
Sbjct: 412 FYQLSMVSEDEGAFLFKVHLMEGYKAPLSMEFCTITMPFPRRRIVAFDGTPSAGTVLTTE 471
Query: 478 HSVEWKIMTSGRALTGRSLEATFPGTVKFAPWQTQRSSSGGTVDEDSDIETDNTNNVVNI 537
HSVEW+I+ SGR+L+G+SLEATFPGT+KF+P Q++R G DE+S E ++ NVVN+
Sbjct: 472 HSVEWRILGSGRSLSGKSLEATFPGTIKFSPLQSRRKGDGD--DEES--EDESAENVVNV 527
Query: 538 EEFLMEKMNMDLPPVDLEEPFCWQAYNYAKVSFKIIGASISGMSIDPKSVSIYPAVKAPV 597
E+FL++KMN DLP +LEEPFCWQAY+YAKVSFKI+GAS+S MSID KSV+IYP K+PV
Sbjct: 528 EDFLVQKMNKDLPAAELEEPFCWQAYDYAKVSFKIVGASVSRMSIDTKSVNIYPTTKSPV 587
Query: 598 EFSAQVTSGDYILWNTLGKCPSVA 621
EFSAQVTSGDYILWNTLGK PS A
Sbjct: 588 EFSAQVTSGDYILWNTLGKAPSAA 611
>DICTYBASE|DDB_G0285113 [details] [associations]
symbol:DDB_G0285113 "MHD domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0030131 "clathrin
adaptor complex" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] InterPro:IPR008968 Pfam:PF00928
PROSITE:PS51072 dictyBase:DDB_G0285113 GO:GO:0006886 GO:GO:0016192
GO:GO:0030131 SUPFAM:SSF49447 eggNOG:NOG330107 EMBL:AAFI02000074
RefSeq:XP_639871.1 ProteinModelPortal:Q54NP5
EnsemblProtists:DDB0186347 GeneID:8624942 KEGG:ddi:DDB_G0285113
InParanoid:Q54NP5 OMA:SGSLICK ProtClustDB:CLSZ2728993
Uniprot:Q54NP5
Length = 585
Score = 365 (133.5 bits), Expect = 2.1e-34, Sum P(2) = 2.1e-34
Identities = 88/270 (32%), Positives = 147/270 (54%)
Query: 255 SRPLEKDALRSFISSAMPFGTPVDLSYSNIFAIKVNGFPSSELPPQDLKQPAWKPYLYKG 314
++P L+ F+++ +PFG P+D +++N+ A+ GFPS E Q K+PAWKP+L+KG
Sbjct: 195 NKPPPYPELQVFLTNIIPFGQPIDTNFNNVKAMIRQGFPSVETFQQ--KRPAWKPFLHKG 252
Query: 315 KQRLLFTIHETVHAAMYDRDEIPDSLSVSGQINCRAELEGMPDVSF---P---------- 361
KQ+L F I ET+ +YD IPD VSG + C+A+LEGMP+VSF P
Sbjct: 253 KQQLDFIISETIQCILYDNPSIPDVSKVSGSLICKADLEGMPEVSFYLQPTIAATGSGVG 312
Query: 362 -LTGLNSAHVEVLSFHPSAQVPEQ-GVDKQAVMFSPPLGNFVLMRYQAICGL-GPPVKGF 418
+ G N + L+ + Q ++ + F+PPL +F L+ Y + G+ P++GF
Sbjct: 313 GIIGQNEPVITNLAIDSTVQTTSDININNKISFFNPPLDHFKLLSY-GVQGIKAVPLRGF 371
Query: 419 YQLSMVSEDEGAFLFKLCLMESYKAPLTMEFCNVTMLFPRR-RVVSFDGTPSIGTVSNNE 477
YQ+ S + L +L L + ++C + + F R ++ + +P+ G++ +
Sbjct: 372 YQMKETSANSIKVLIQLKLNSEMNN--SFDYCLLKIPFKNRSNIIQVNASPTTGSIFI-D 428
Query: 478 HSVEWKIMTSGRALTGRSLEATFPGTVKFA 507
HS++ I G+ TGR+LE P + F+
Sbjct: 429 HSLKAIIWNIGQKFTGRNLEVALPMEIVFS 458
Score = 261 (96.9 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21
Identities = 70/265 (26%), Positives = 128/265 (48%)
Query: 362 LTGLNSAHVEVLSFHPSAQVPEQ-GVDKQAVMFSPPLGNFVLMRYQAICGL-GPPVKGFY 419
+ G N + L+ + Q ++ + F+PPL +F L+ Y + G+ P++GFY
Sbjct: 314 IIGQNEPVITNLAIDSTVQTTSDININNKISFFNPPLDHFKLLSY-GVQGIKAVPLRGFY 372
Query: 420 QLSMVSEDEGAFLFKLCLMESYKAPLTMEFCNVTMLFPRR-RVVSFDGTPSIGTVSNNEH 478
Q+ S + L +L L + ++C + + F R ++ + +P+ G++ +H
Sbjct: 373 QMKETSANSIKVLIQLKLNSEMNN--SFDYCLLKIPFKNRSNIIQVNASPTTGSIFI-DH 429
Query: 479 SVEWKIMTSGRALTGRSLEATFPGTVKFAPWQTQRSSSGGTVDEDSDIETDNTNNVVNIE 538
S++ I G+ TGR+LE P + F+ T + + + N N+
Sbjct: 430 SLKAIIWNIGQKFTGRNLEVALPMEIVFSSVPTNLIPQPPPQPPTLIVSSSSGNQ--NVT 487
Query: 539 EFLMEKMN---MDLPPVDLEE-----PFCWQAYNYAKVSFKIIGASISGMSIDPKSVSIY 590
F + + +D P D E+ PFC + ++ ++ FKI ++SG++IDPK V IY
Sbjct: 488 AFPKQDQSFPIIDSSPSDQEDCYSPDPFCTGSNSFVRIYFKIQNCTLSGLNIDPKKVVIY 547
Query: 591 PAVKAPVEFSAQVTSGDYILWNTLG 615
P K + +V S +YI+WN+LG
Sbjct: 548 PTNKFKLNIEREVLSSEYIIWNSLG 572
Score = 66 (28.3 bits), Expect = 2.1e-34, Sum P(2) = 2.1e-34
Identities = 23/66 (34%), Positives = 32/66 (48%)
Query: 5 CSIRALWIL----NNFDAVVFSRRFPVVERRWREACKTENESCIEDPIKYNVLPLVPTDS 60
C++RALW+L N ++ S+R VE R R A N YN +P+ DS
Sbjct: 2 CTLRALWVLKENSNGGTEIILSKRINTVENRVR-ALSGSN---------YNPIPI---DS 48
Query: 61 ELASAF 66
EL + F
Sbjct: 49 ELIALF 54
>UNIPROTKB|E1BXF7 [details] [associations]
symbol:MUDENG "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030131 "clathrin adaptor complex" evidence=IEA]
[GO:0005764 "lysosome" evidence=IEA] [GO:0005770 "late endosome"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0016197
"endosomal transport" evidence=IEA] InterPro:IPR008968 Pfam:PF00928
PROSITE:PS51072 GO:GO:0005829 GO:GO:0006886 GO:GO:0016192
GO:GO:0005764 GO:GO:0016197 GO:GO:0005770 GO:GO:0030131
SUPFAM:SSF49447 GeneTree:ENSGT00390000006191 OMA:CKCDLEG CTD:423548
EMBL:AC140945 IPI:IPI00577874 RefSeq:XP_421441.1 UniGene:Gga.38117
Ensembl:ENSGALT00000019765 GeneID:423548 KEGG:gga:423548
NextBio:20826006 Uniprot:E1BXF7
Length = 484
Score = 188 (71.2 bits), Expect = 2.7e-22, Sum P(4) = 2.7e-22
Identities = 80/267 (29%), Positives = 120/267 (44%)
Query: 263 LRSFISSAMPFGTPVDLSYSNIFAIKVNGFPSSELPPQDLKQPAWKPYLYKGKQRLLFTI 322
LR+ I A P GTP++ +NI ++ + F ++ P D+KQPAW+ YKGK ++ I
Sbjct: 153 LRTLIIQACPLGTPLN---TNISSLS-SSFDDIQVVPTDVKQPAWRSNTYKGKPQVNVCI 208
Query: 323 HETVHAAMYDRDEIPDSLSVSGQINCRAELEGM-PDVSF----PLTG--LNSAHVE--VL 373
E V YD+ ++ D V G +NC+ ++EG P+V+ P G L V V
Sbjct: 209 TEKVKCMQYDKRDVVDMWQVYGAVNCKCDIEGAAPNVTLTLNLPTNGSPLQDIFVHHCVT 268
Query: 374 SFHPSAQVPEQGVDK--QAVMFSP------PLGNFVLMRYQAICGLGPPVKGFYQLSMVS 425
S P A + V+ +V P P + Y PP+ G YQL
Sbjct: 269 SVDP-AMLMSSSVNPLDDSVYSGPYKFPFIPPSESFNLCYYTSQVPVPPILGCYQLI--- 324
Query: 426 EDEGAFL---FKLCLMESYKAPLTMEFCNVTM-LFPRRRVVSFDGTPSIGTVS-NNEHSV 480
+EG+ L L L ES K + E+C + F R + + S G + + E S+
Sbjct: 325 -EEGSQLKITVNLKLHESIKN--SFEYCEARIPFFNRGPIAHLECKVSYGQLDLSREKSL 381
Query: 481 -EWKIMTSGRALTGRSLEATFPGTVKF 506
W I G+ +S E + GTV F
Sbjct: 382 LVWVI---GQKFP-KSSEVSLTGTVTF 404
Score = 92 (37.4 bits), Expect = 2.7e-22, Sum P(4) = 2.7e-22
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 565 YAKVSFKIIGASISGMSIDPKSVSIYPAVKAPVEFSAQVTSGDYILWNTLGKCPSV 620
Y K+ F+I +++G +D SV I+ K + S ++ S DY +WN+ P++
Sbjct: 423 YVKMYFRIPDFTLTGCYVDQHSVQIFTPGKPKITASRELISSDYYIWNSKASAPTM 478
Score = 88 (36.0 bits), Expect = 2.7e-22, Sum P(4) = 2.7e-22
Identities = 31/92 (33%), Positives = 44/92 (47%)
Query: 6 SIRALWILNNFD-AVVFSRRFPVVERRWREACKTENESCI---EDPIKYNVLPLVPTDSE 61
++RALW+L + AV+FSRR+P VE R EA + D +K + L TD +
Sbjct: 2 ALRALWVLRHEPRAVLFSRRYPTVEAR-AEAFNGSTHVAVPSDSDFLKAMLFELRLTDDQ 60
Query: 62 LASAFAERKRREGSVRGFGVRVSQSTEGSDSW 93
+F E + + VR S EG D W
Sbjct: 61 ---SFVEHRDTCTRIDHSSVR-SVRVEGGDLW 88
Score = 44 (20.5 bits), Expect = 2.7e-22, Sum P(4) = 2.7e-22
Identities = 11/28 (39%), Positives = 14/28 (50%)
Query: 111 EGGENHLLWPLILHVKGPYCILVLPQVE 138
EGG+ LWP++ K LP VE
Sbjct: 83 EGGD---LWPVVAFQKSGLIYACLPLVE 107
Score = 42 (19.8 bits), Expect = 2.1e-06, Sum P(4) = 2.1e-06
Identities = 11/35 (31%), Positives = 16/35 (45%)
Query: 456 FPRRRVVSFDGTPSIGTVSNNEHSVEWKIMTSGRA 490
FP+ VS GT + G + EH + + T A
Sbjct: 390 FPKSSEVSLTGTVTFGDIGE-EHPTNY-VCTGNTA 422
>UNIPROTKB|Q4R6Q7 [details] [associations]
symbol:AP5M1 "AP-5 complex subunit mu-1" species:9541
"Macaca fascicularis" [GO:0005764 "lysosome" evidence=ISS]
[GO:0005770 "late endosome" evidence=ISS] [GO:0005829 "cytosol"
evidence=ISS] [GO:0016020 "membrane" evidence=ISS] [GO:0016197
"endosomal transport" evidence=ISS] [GO:0030119 "AP-type membrane
coat adaptor complex" evidence=ISS] InterPro:IPR008968 Pfam:PF00928
PROSITE:PS51072 GO:GO:0005829 GO:GO:0006886 GO:GO:0016192
GO:GO:0031902 GO:GO:0005765 GO:GO:0005764 GO:GO:0016197
GO:GO:0005770 GO:GO:0030131 GO:GO:0030119 SUPFAM:SSF49447
OrthoDB:EOG4X3H19 EMBL:AB169123 ProteinModelPortal:Q4R6Q7
Uniprot:Q4R6Q7
Length = 490
Score = 198 (74.8 bits), Expect = 2.7e-20, Sum P(4) = 2.7e-20
Identities = 81/264 (30%), Positives = 118/264 (44%)
Query: 263 LRSFISSAMPFGTPVDLSYSNIFAIKVNGFPSSELPPQDLKQPAWKPYLYKGKQRLLFTI 322
L + A PFGT +D + N ++ F +S PQ KQPAWK YKGK ++ +I
Sbjct: 159 LPDLLLQACPFGTLLDANLKN--SLDNTNF-ASVTQPQ--KQPAWKTGTYKGKPQVSISI 213
Query: 323 HETVHAAMYDRDEIPDSLSVSGQINCRAELEG-MPDVSFPLT-GLNSAHVEVLSFHP--- 377
E V + YD+ I D+ V G + C+ +LEG MP+V+ L N + ++ + HP
Sbjct: 214 TEKVKSMQYDKQGIADTWQVVGTVTCKCDLEGIMPNVTISLNLPTNGSPLQDILVHPCVT 273
Query: 378 ---SAQVPEQGVDKQA-VMFSPPLGNFVL---MRYQAICGLG-----PPVKGFYQLSMVS 425
SA + +D FS P F L + +C PP+ GFYQL
Sbjct: 274 SLDSAILTSSSIDAMDDSAFSGPY-KFPLTPPLESFNLCYYTSQVPVPPILGFYQLKE-E 331
Query: 426 EDEGAFLFKLCLMESYKAPLTMEFCNVTMLFPRRRVVS-FDGTPSIGT--VSNNEHSVEW 482
E + L L ES K EFC + F R ++ + S G V + + W
Sbjct: 332 EVQLRITINLKLHESVKN--NFEFCEAHIPFYNRGPITHLEYKTSFGQLEVFREKSLLIW 389
Query: 483 KIMTSGRALTGRSLEATFPGTVKF 506
I G+ +S+E + GTV F
Sbjct: 390 II---GQKFP-KSMEISLSGTVTF 409
Score = 94 (38.1 bits), Expect = 2.7e-20, Sum P(4) = 2.7e-20
Identities = 19/67 (28%), Positives = 35/67 (52%)
Query: 556 EPFCWQAYNYAKVSFKIIGASISGMSIDPKSVSIYPAVKAPVEFSAQVTSGDYILWNTLG 615
+P C Y K+ F+I+ +++G D SV ++ + K + ++ S DY +WN+
Sbjct: 420 DPICIGETAYLKLHFRILDYTLTGCYADQHSVQVFASGKPKISAYRKLISSDYYIWNS-- 477
Query: 616 KCPSVAT 622
K P+ T
Sbjct: 478 KAPAPVT 484
Score = 54 (24.1 bits), Expect = 2.7e-20, Sum P(4) = 2.7e-20
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 8 RALWILNN------FDAVVFSRRFPVVERRWR 33
RA+W++++ V FSRR+P VE+R R
Sbjct: 4 RAVWLISHEPGTPLCGTVRFSRRYPTVEKRAR 35
Score = 45 (20.9 bits), Expect = 2.7e-20, Sum P(4) = 2.7e-20
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 112 GGENHLLWPLILHVKGPYCILVLPQVE 138
GGE LWP++ +K +P VE
Sbjct: 89 GGEE--LWPVVAFLKNDIIYACVPLVE 113
>UNIPROTKB|Q9H0R1 [details] [associations]
symbol:AP5M1 "AP-5 complex subunit mu-1" species:9606 "Homo
sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030131 "clathrin adaptor complex" evidence=IEA]
[GO:0005765 "lysosomal membrane" evidence=IEA] [GO:0031902 "late
endosome membrane" evidence=IEA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0016197
"endosomal transport" evidence=IMP] [GO:0005770 "late endosome"
evidence=IDA] [GO:0005764 "lysosome" evidence=IDA] [GO:0030119
"AP-type membrane coat adaptor complex" evidence=IDA]
InterPro:IPR008968 Pfam:PF00928 PROSITE:PS51072 GO:GO:0005829
GO:GO:0006886 GO:GO:0016192 GO:GO:0031902 GO:GO:0005765
GO:GO:0005764 GO:GO:0016197 GO:GO:0005770 GO:GO:0030131
GO:GO:0030119 SUPFAM:SSF49447 CTD:55745 eggNOG:NOG330107
HOGENOM:HOG000113695 EMBL:AL136685 EMBL:AK001675 EMBL:AK172824
EMBL:BC013174 EMBL:AF094583 IPI:IPI00061266 IPI:IPI00942480
RefSeq:NP_060699.3 UniGene:Hs.597349 ProteinModelPortal:Q9H0R1
IntAct:Q9H0R1 STRING:Q9H0R1 PhosphoSite:Q9H0R1 DMDM:37537844
PRIDE:Q9H0R1 Ensembl:ENST00000261558 GeneID:55745 KEGG:hsa:55745
UCSC:uc001xcu.4 UCSC:uc001xcv.3 GeneCards:GC14P057737
HGNC:HGNC:20192 MIM:614368 neXtProt:NX_Q9H0R1 PharmGKB:PA164723216
InParanoid:Q9H0R1 OrthoDB:EOG4X3H19 PhylomeDB:Q9H0R1
GenomeRNAi:55745 NextBio:60715 ArrayExpress:Q9H0R1 Bgee:Q9H0R1
CleanEx:HS_MUDENG Genevestigator:Q9H0R1 GermOnline:ENSG00000053770
Uniprot:Q9H0R1
Length = 490
Score = 193 (73.0 bits), Expect = 6.6e-20, Sum P(4) = 6.6e-20
Identities = 80/264 (30%), Positives = 119/264 (45%)
Query: 263 LRSFISSAMPFGTPVDLSYSNIFAIKVNGFPSSELPPQDLKQPAWKPYLYKGKQRLLFTI 322
L + A PFGT +D + N ++ F +S PQ KQPAWK YKGK ++ +I
Sbjct: 159 LPDLLLQACPFGTLLDANLQN--SLDNTNF-ASVTQPQ--KQPAWKTGTYKGKPQVSISI 213
Query: 323 HETVHAAMYDRDEIPDSLSVSGQINCRAELEG-MPDVSFPLT-GLNSAHVEVLSFHP--- 377
E V + YD+ I D+ V G + C+ +LEG MP+V+ L+ N + ++ + HP
Sbjct: 214 TEKVKSMQYDKQGIADTWQVVGTVTCKCDLEGIMPNVTISLSLPTNGSPLQDILVHPCVT 273
Query: 378 ---SAQVPEQGVDKQA-VMFSPPLG-NFV--LMRYQAICGLG-----PPVKGFYQLSMVS 425
SA + +D FS P F L + +C PP+ GFYQ+
Sbjct: 274 SLDSAILTSSSIDAMDDSAFSGPYKFPFTPPLESFN-LCFYTSQVPVPPILGFYQMKE-E 331
Query: 426 EDEGAFLFKLCLMESYKAPLTMEFCNVTMLFPRRRVVS-FDGTPSIGT--VSNNEHSVEW 482
E + L L ES K EFC + F R ++ + S G V + + W
Sbjct: 332 EVQLRITINLKLHESVKN--NFEFCEAHIPFYNRGPITHLEYKTSFGQLEVFREKSLLIW 389
Query: 483 KIMTSGRALTGRSLEATFPGTVKF 506
I G+ +S+E + GTV F
Sbjct: 390 II---GQKFP-KSMEISLSGTVTF 409
Score = 96 (38.9 bits), Expect = 6.6e-20, Sum P(4) = 6.6e-20
Identities = 19/67 (28%), Positives = 35/67 (52%)
Query: 556 EPFCWQAYNYAKVSFKIIGASISGMSIDPKSVSIYPAVKAPVEFSAQVTSGDYILWNTLG 615
+P C Y K+ F+I+ +++G D SV ++ + K + ++ S DY +WN+
Sbjct: 420 DPICTGETAYLKLHFRILDYTLTGCYADQHSVQVFASGKPKISAHRKLISSDYYIWNS-- 477
Query: 616 KCPSVAT 622
K P+ T
Sbjct: 478 KAPAPVT 484
Score = 54 (24.1 bits), Expect = 6.6e-20, Sum P(4) = 6.6e-20
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 8 RALWILNN------FDAVVFSRRFPVVERRWR 33
RA+W++++ V FSRR+P VE+R R
Sbjct: 4 RAVWLISHEPGTPLCGTVRFSRRYPTVEKRAR 35
Score = 45 (20.9 bits), Expect = 6.6e-20, Sum P(4) = 6.6e-20
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 112 GGENHLLWPLILHVKGPYCILVLPQVE 138
GGE LWP++ +K +P VE
Sbjct: 89 GGEE--LWPVVAFLKNDMIYACVPLVE 113
>UNIPROTKB|Q5E9X5 [details] [associations]
symbol:AP5M1 "AP-5 complex subunit mu-1" species:9913 "Bos
taurus" [GO:0030119 "AP-type membrane coat adaptor complex"
evidence=ISS] [GO:0016020 "membrane" evidence=ISS] [GO:0005829
"cytosol" evidence=ISS] [GO:0005770 "late endosome" evidence=ISS]
[GO:0005764 "lysosome" evidence=ISS] [GO:0016197 "endosomal
transport" evidence=ISS] [GO:0031902 "late endosome membrane"
evidence=IEA] [GO:0005765 "lysosomal membrane" evidence=IEA]
[GO:0030131 "clathrin adaptor complex" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR008968
Pfam:PF00928 PROSITE:PS51072 GO:GO:0005829 GO:GO:0006886
GO:GO:0016192 GO:GO:0031902 GO:GO:0005765 GO:GO:0005764
GO:GO:0016197 GO:GO:0005770 GO:GO:0030131 GO:GO:0030119
SUPFAM:SSF49447 EMBL:BT020795 IPI:IPI00903565 RefSeq:NP_001015670.1
UniGene:Bt.25242 ProteinModelPortal:Q5E9X5 PRIDE:Q5E9X5
Ensembl:ENSBTAT00000017337 GeneID:539663 KEGG:bta:539663 CTD:55745
eggNOG:NOG330107 GeneTree:ENSGT00390000006191 HOGENOM:HOG000113695
OMA:CKCDLEG NextBio:20878140 ArrayExpress:Q5E9X5 Uniprot:Q5E9X5
Length = 490
Score = 193 (73.0 bits), Expect = 2.1e-19, Sum P(4) = 2.1e-19
Identities = 77/264 (29%), Positives = 118/264 (44%)
Query: 263 LRSFISSAMPFGTPVDLSYSNIFAIKVNGFPSSELPPQDLKQPAWKPYLYKGKQRLLFTI 322
L + PFGT +D + N +N + L KQPAWK YKGK ++ +I
Sbjct: 159 LSDLLLQTCPFGTLLDANLQNSLD-SINSASVTHLQ----KQPAWKTGTYKGKPQVSISI 213
Query: 323 HETVHAAMYDRDEIPDSLSVSGQINCRAELEG-MPDVSFPLT-GLNSAHVEVLSFHP--- 377
E V++ YD+ EI D+ V G + C+ +LEG MP+V+ L+ N + ++ + HP
Sbjct: 214 TEKVNSMQYDKQEIADTWQVVGVVTCKCDLEGSMPNVTISLSLPTNGSPLQDILVHPCVT 273
Query: 378 ---SAQVPEQGVDKQA-VMFSPPLGNFVL---MRYQAICGLG-----PPVKGFYQLSMVS 425
SA + +D FS P F L + +C PP+ GFYQ+
Sbjct: 274 SLDSAILTSSSIDAMDDSAFSGPY-KFPLTPPLESFNLCYYTSQVPVPPILGFYQVKE-E 331
Query: 426 EDEGAFLFKLCLMESYKAPLTMEFCNVTMLFPRRRVVSF-DGTPSIGT--VSNNEHSVEW 482
E + L L ES K + EFC + F R ++ + S G V + + W
Sbjct: 332 EVQLKITVNLKLHESVKN--SFEFCEAHIPFYNRGPITHVEYKASFGQLEVFREKSLLVW 389
Query: 483 KIMTSGRALTGRSLEATFPGTVKF 506
I G+ +S+E + GT+ F
Sbjct: 390 II---GQKFP-KSMEISLSGTITF 409
Score = 93 (37.8 bits), Expect = 2.1e-19, Sum P(4) = 2.1e-19
Identities = 20/71 (28%), Positives = 38/71 (53%)
Query: 555 EEPF---CWQAYNYAKVSFKIIGASISGMSIDPKSVSIYPAVKAPVEFSAQVTSGDYILW 611
++PF C Y K+ F+I+ +++G +D SV ++ + K + ++ S DY +W
Sbjct: 416 KQPFDQICIGGTAYLKLHFRILDYTLTGCYVDQHSVQVFASGKPKISTYRKLISSDYYIW 475
Query: 612 NTLGKCPSVAT 622
N+ K P+ T
Sbjct: 476 NS--KAPAPVT 484
Score = 53 (23.7 bits), Expect = 2.1e-19, Sum P(4) = 2.1e-19
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 8 RALWILNNFDA------VVFSRRFPVVERR 31
RA+W++++ V FSRR+P VE+R
Sbjct: 4 RAVWLISHESGTPLGGIVKFSRRYPTVEKR 33
Score = 44 (20.5 bits), Expect = 2.1e-19, Sum P(4) = 2.1e-19
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 112 GGENHLLWPLILHVKGPYCILVLPQVE 138
GGE LWP++ +K +P VE
Sbjct: 89 GGEE--LWPVVAFLKNGMIYACVPLVE 113
>UNIPROTKB|F1SSM1 [details] [associations]
symbol:AP5M1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016197 "endosomal transport" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005770 "late endosome" evidence=IEA]
[GO:0005764 "lysosome" evidence=IEA] [GO:0030131 "clathrin adaptor
complex" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] InterPro:IPR008968 Pfam:PF00928 PROSITE:PS51072
GO:GO:0005829 GO:GO:0006886 GO:GO:0016192 GO:GO:0005764
GO:GO:0016197 GO:GO:0005770 GO:GO:0030131 SUPFAM:SSF49447
GeneTree:ENSGT00390000006191 OMA:CKCDLEG EMBL:CU062518
RefSeq:XP_001927818.1 UniGene:Ssc.17873 Ensembl:ENSSSCT00000005582
GeneID:100153219 KEGG:ssc:100153219 CTD:423548 Uniprot:F1SSM1
Length = 490
Score = 198 (74.8 bits), Expect = 2.2e-19, Sum P(4) = 2.2e-19
Identities = 83/267 (31%), Positives = 126/267 (47%)
Query: 263 LRSFISSAMPFGTPVDLSYSNIFAIKVNGFPSSELPPQDLKQPAWKPYLYKGKQRLLFTI 322
L + + PFGT +D + N +N F +S PQ KQPAWK +YKGK ++ +I
Sbjct: 159 LPDLLLQSCPFGTLLDANLQNSLD-SIN-F-TSVTHPQ--KQPAWKAGMYKGKPQVSISI 213
Query: 323 HETVHAAMYDRDEIPDSLSVSGQINCRAELEG-MPDVSFPLT-GLNSAHVEVLSFHP--- 377
E V + YD+ +I D+ V G + C+ +LEG MP+V+ L+ N + ++ + HP
Sbjct: 214 TEKVKSMQYDKQDIADTWQVVGAVTCKCDLEGSMPNVTISLSLPTNGSPLQDILVHPCVT 273
Query: 378 ---SAQVPEQGVDKQA-VMFSPPLGNFVL---MRYQAICGLG-----PPVKGFYQLSMVS 425
SA + +D FS P F L + +C PP+ GFYQ+
Sbjct: 274 SLDSAILTSSSIDPMDDSAFSGPY-KFPLTPPLESFNLCYYTSQVPVPPILGFYQV---- 328
Query: 426 EDEGAFL---FKLCLMESYKAPLTMEFCNVTMLFPRRRVVSF-DGTPSIGTVSN-NEHSV 480
++EG L L L ES K + EFC + F R ++ + S G + E S+
Sbjct: 329 KEEGVQLKITVNLKLHESVKN--SFEFCEAHIPFYNRGPITHVEYKVSFGQIEVFREKSL 386
Query: 481 -EWKIMTSGRALTGRSLEATFPGTVKF 506
W I G+ +S+E + GTV F
Sbjct: 387 LVWII---GQKFP-KSMEISLSGTVTF 409
Score = 89 (36.4 bits), Expect = 2.2e-19, Sum P(4) = 2.2e-19
Identities = 18/67 (26%), Positives = 34/67 (50%)
Query: 555 EEPF---CWQAYNYAKVSFKIIGASISGMSIDPKSVSIYPAVKAPVEFSAQVTSGDYILW 611
++PF C Y K+ F+I+ +++G D SV ++ + K + ++ S DY +W
Sbjct: 416 KQPFDHICIGGTAYLKLHFRILDYTLTGCYADQHSVQVFASGKPKISTHRKLISSDYYIW 475
Query: 612 NTLGKCP 618
N+ P
Sbjct: 476 NSKAPAP 482
Score = 52 (23.4 bits), Expect = 2.2e-19, Sum P(4) = 2.2e-19
Identities = 11/30 (36%), Positives = 19/30 (63%)
Query: 8 RALWILNN------FDAVVFSRRFPVVERR 31
RA+W++++ + FSRR+P VE+R
Sbjct: 4 RAVWLISHEPGTSPCGTIKFSRRYPTVEKR 33
Score = 43 (20.2 bits), Expect = 2.2e-19, Sum P(4) = 2.2e-19
Identities = 17/58 (29%), Positives = 27/58 (46%)
Query: 102 VIGLYIDTEEGGENHLLWPLILHVKGPYCILVLPQVEPRHLKAYARLCKKSDCGNAVG 159
+ GL + +EE LWP++ +K +P VE + L + L S CG + G
Sbjct: 83 IYGLPVGSEE------LWPVVAFLKNGMIYACVPLVE-QTLSPHPPLI--SICGISQG 131
>UNIPROTKB|E2RAC5 [details] [associations]
symbol:AP5M1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016197 "endosomal transport" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005770 "late endosome"
evidence=IEA] [GO:0005764 "lysosome" evidence=IEA] [GO:0030131
"clathrin adaptor complex" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR008968
Pfam:PF00928 PROSITE:PS51072 GO:GO:0005829 GO:GO:0006886
GO:GO:0016192 GO:GO:0005764 GO:GO:0016197 GO:GO:0005770
GO:GO:0030131 SUPFAM:SSF49447 CTD:55745
GeneTree:ENSGT00390000006191 OMA:CKCDLEG EMBL:AAEX03005753
RefSeq:XP_547833.1 ProteinModelPortal:E2RAC5
Ensembl:ENSCAFT00000024194 GeneID:490711 KEGG:cfa:490711
NextBio:20863678 Uniprot:E2RAC5
Length = 491
Score = 194 (73.4 bits), Expect = 2.7e-19, Sum P(4) = 2.7e-19
Identities = 81/264 (30%), Positives = 120/264 (45%)
Query: 263 LRSFISSAMPFGTPVDLSYSNIFAIKVNGFPSSELPPQDLKQPAWKPYLYKGKQRLLFTI 322
L + A PFGT +D + N +N F +S PQ KQPAWK YKGK ++ +I
Sbjct: 159 LPDLLLQACPFGTLLDANLQNSLD-SIN-F-ASVTHPQ--KQPAWKVGTYKGKPQVSISI 213
Query: 323 HETVHAAMYDRDEIPDSLSVSGQINCRAELEG-MPDVSFPLT-GLNSAHVEVLSFHP--- 377
E V + YD+ +I D+ V G + C+ +LEG MP+V+ L+ N + ++ + HP
Sbjct: 214 TEKVKSMQYDKQDIADTWQVVGAVTCKCDLEGIMPNVTISLSLPTNGSPLQDILVHPCVT 273
Query: 378 ---SAQVPEQGVDKQA-VMFSPPLG-NFV--LMRYQAICGLG-----PPVKGFYQLSMVS 425
SA + +D FS P F L + +C PP+ GFYQ+
Sbjct: 274 SLDSAILTSSSIDAMDDSAFSGPYKFPFTPPLESFN-LCYYTSQVPVPPILGFYQMKE-E 331
Query: 426 EDEGAFLFKLCLMESYKAPLTMEFCNVTMLFPRRRVVSF-DGTPSIGT--VSNNEHSVEW 482
E + L L ES K EFC + F R ++ + S G V + + W
Sbjct: 332 EIKVKITVNLKLHESVKN--NFEFCEAHIPFYNRGPITHVESKVSFGQLEVFREKSLLIW 389
Query: 483 KIMTSGRALTGRSLEATFPGTVKF 506
I G+ +S+E + GTV F
Sbjct: 390 II---GQKFP-KSMEISLSGTVTF 409
Score = 93 (37.8 bits), Expect = 2.7e-19, Sum P(4) = 2.7e-19
Identities = 20/69 (28%), Positives = 35/69 (50%)
Query: 555 EEPF---CWQAYNYAKVSFKIIGASISGMSIDPKSVSIYPAVKAPVEFSAQVTSGDYILW 611
++PF C Y K+ FKI+ +++G D SV ++ + K + ++ S DY +W
Sbjct: 416 KQPFDEICIGGTAYLKLHFKILDYTLTGCYADQHSVQVFASGKPKISTYRKLISSDYYIW 475
Query: 612 NTLGKCPSV 620
N+ P V
Sbjct: 476 NSKAPAPVV 484
Score = 51 (23.0 bits), Expect = 2.7e-19, Sum P(4) = 2.7e-19
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 8 RALWILNNFDA------VVFSRRFPVVERR 31
RA+W++++ V FSRR+P VE+R
Sbjct: 4 RAVWLISHEPGAPLGGTVRFSRRYPTVEKR 33
Score = 44 (20.5 bits), Expect = 2.7e-19, Sum P(4) = 2.7e-19
Identities = 14/37 (37%), Positives = 18/37 (48%)
Query: 102 VIGLYIDTEEGGENHLLWPLILHVKGPYCILVLPQVE 138
V GL I GGE LWP++ +K +P VE
Sbjct: 83 VYGLLIG---GGE---LWPVVAFLKNNMIYACVPLVE 113
>UNIPROTKB|E7EQ45 [details] [associations]
symbol:AP5M1 "AP-5 complex subunit mu-1" species:9606 "Homo
sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030131 "clathrin adaptor complex" evidence=IEA]
InterPro:IPR008968 Pfam:PF00928 PROSITE:PS51072 GO:GO:0006886
GO:GO:0016192 GO:GO:0030131 SUPFAM:SSF49447 OMA:CKCDLEG
HGNC:HGNC:20192 EMBL:AL355834 EMBL:AL139195 IPI:IPI00152947
ProteinModelPortal:E7EQ45 Ensembl:ENST00000431972
ArrayExpress:E7EQ45 Bgee:E7EQ45 Uniprot:E7EQ45
Length = 504
Score = 193 (73.0 bits), Expect = 3.5e-18, Sum P(4) = 3.5e-18
Identities = 80/264 (30%), Positives = 119/264 (45%)
Query: 263 LRSFISSAMPFGTPVDLSYSNIFAIKVNGFPSSELPPQDLKQPAWKPYLYKGKQRLLFTI 322
L + A PFGT +D + N ++ F +S PQ KQPAWK YKGK ++ +I
Sbjct: 173 LPDLLLQACPFGTLLDANLQN--SLDNTNF-ASVTQPQ--KQPAWKTGTYKGKPQVSISI 227
Query: 323 HETVHAAMYDRDEIPDSLSVSGQINCRAELEG-MPDVSFPLT-GLNSAHVEVLSFHP--- 377
E V + YD+ I D+ V G + C+ +LEG MP+V+ L+ N + ++ + HP
Sbjct: 228 TEKVKSMQYDKQGIADTWQVVGTVTCKCDLEGIMPNVTISLSLPTNGSPLQDILVHPCVT 287
Query: 378 ---SAQVPEQGVDKQA-VMFSPPLG-NFV--LMRYQAICGLG-----PPVKGFYQLSMVS 425
SA + +D FS P F L + +C PP+ GFYQ+
Sbjct: 288 SLDSAILTSSSIDAMDDSAFSGPYKFPFTPPLESFN-LCFYTSQVPVPPILGFYQMKE-E 345
Query: 426 EDEGAFLFKLCLMESYKAPLTMEFCNVTMLFPRRRVVS-FDGTPSIGT--VSNNEHSVEW 482
E + L L ES K EFC + F R ++ + S G V + + W
Sbjct: 346 EVQLRITINLKLHESVKN--NFEFCEAHIPFYNRGPITHLEYKTSFGQLEVFREKSLLIW 403
Query: 483 KIMTSGRALTGRSLEATFPGTVKF 506
I G+ +S+E + GTV F
Sbjct: 404 II---GQKFP-KSMEISLSGTVTF 423
Score = 96 (38.9 bits), Expect = 3.5e-18, Sum P(4) = 3.5e-18
Identities = 19/67 (28%), Positives = 35/67 (52%)
Query: 556 EPFCWQAYNYAKVSFKIIGASISGMSIDPKSVSIYPAVKAPVEFSAQVTSGDYILWNTLG 615
+P C Y K+ F+I+ +++G D SV ++ + K + ++ S DY +WN+
Sbjct: 434 DPICTGETAYLKLHFRILDYTLTGCYADQHSVQVFASGKPKISAHRKLISSDYYIWNS-- 491
Query: 616 KCPSVAT 622
K P+ T
Sbjct: 492 KAPAPVT 498
Score = 45 (20.9 bits), Expect = 3.5e-18, Sum P(4) = 3.5e-18
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 112 GGENHLLWPLILHVKGPYCILVLPQVE 138
GGE LWP++ +K +P VE
Sbjct: 103 GGEE--LWPVVAFLKNDMIYACVPLVE 127
Score = 38 (18.4 bits), Expect = 3.5e-18, Sum P(4) = 3.5e-18
Identities = 7/11 (63%), Positives = 9/11 (81%)
Query: 23 RRFPVVERRWR 33
RR+P VE+R R
Sbjct: 39 RRYPTVEKRAR 49
>MGI|MGI:1921635 [details] [associations]
symbol:Ap5m1 "adaptor-related protein complex 5, mu 1
subunit" species:10090 "Mus musculus" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005764 "lysosome" evidence=ISO] [GO:0005768
"endosome" evidence=IEA] [GO:0005770 "late endosome" evidence=ISO]
[GO:0005829 "cytosol" evidence=ISO] [GO:0006810 "transport"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=ISO] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0016197 "endosomal transport"
evidence=ISO] [GO:0030119 "AP-type membrane coat adaptor complex"
evidence=ISO] [GO:0030131 "clathrin adaptor complex" evidence=IEA]
InterPro:IPR008968 Pfam:PF00928 PROSITE:PS51072 MGI:MGI:1921635
GO:GO:0005829 GO:GO:0006886 GO:GO:0016192 GO:GO:0031902
GO:GO:0005765 GO:GO:0005764 GO:GO:0016197 GO:GO:0005770
EMBL:CH466605 GO:GO:0030131 GO:GO:0030119 SUPFAM:SSF49447 CTD:55745
eggNOG:NOG330107 GeneTree:ENSGT00390000006191 OrthoDB:EOG4X3H19
EMBL:AK030928 EMBL:AK031527 EMBL:AK036465 EMBL:AK042544
EMBL:AK051372 EMBL:AK154166 EMBL:AK164148 EMBL:AK170232
EMBL:BC023094 IPI:IPI00222243 IPI:IPI00380377 IPI:IPI00380378
RefSeq:NP_653118.3 UniGene:Mm.379235 ProteinModelPortal:Q8BJ63
PhosphoSite:Q8BJ63 PRIDE:Q8BJ63 Ensembl:ENSMUST00000037473
GeneID:74385 KEGG:mmu:74385 UCSC:uc007tjx.2 UCSC:uc007tjy.2
UCSC:uc007tjz.2 InParanoid:Q3TDF2 NextBio:340613 Bgee:Q8BJ63
CleanEx:MM_4932432K03RIK Genevestigator:Q8BJ63
GermOnline:ENSMUSG00000036291 Uniprot:Q8BJ63
Length = 490
Score = 161 (61.7 bits), Expect = 3.2e-17, Sum P(5) = 3.2e-17
Identities = 42/118 (35%), Positives = 62/118 (52%)
Query: 263 LRSFISSAMPFGTPVDLSYSNIFAIKVNGFPS-SELPPQDLKQPAWKPYLYKGKQRLLFT 321
L + A P GT +D + N +N S S PQ KQPAWK YKGK ++ +
Sbjct: 159 LPDLLLQACPLGTLLDANLQN----SLNSINSVSVTQPQ--KQPAWKVGAYKGKAQISIS 212
Query: 322 IHETVHAAMYDRDEIPDSLSVSGQINCRAELEG-MPDVSFPLT-GLNSAHVEVLSFHP 377
I ETV Y + +I D+ V+G + C+ +LEG MP V+ L+ N + ++ + HP
Sbjct: 213 ITETVKCMQYGKQDIADTWQVAGTVACKCDLEGVMPAVTISLSLPTNGSPLQDIIVHP 270
Score = 86 (35.3 bits), Expect = 3.2e-17, Sum P(5) = 3.2e-17
Identities = 20/71 (28%), Positives = 37/71 (52%)
Query: 555 EEPF---CWQAYNYAKVSFKIIGASISGMSIDPKSVSIYPAVKAPVEFSAQVTSGDYILW 611
++PF C Y K++F+I +++G D SV ++ + K + ++ S DY +W
Sbjct: 416 KQPFDHICIGNTAYIKLNFRIADYTLTGCYADQHSVQVFASGKPKISAYRKLISSDYYIW 475
Query: 612 NTLGKCPSVAT 622
N+ K P+ T
Sbjct: 476 NS--KAPAPVT 484
Score = 59 (25.8 bits), Expect = 3.2e-17, Sum P(5) = 3.2e-17
Identities = 32/120 (26%), Positives = 52/120 (43%)
Query: 393 FSPPLGNFVLMRYQAICGLGPPVKGFYQLSMVSEDEGAFL---FKLCLMESYKAPLTMEF 449
F+PPL +F L Y + + PP+ G Y + ++EG L L ES + E
Sbjct: 301 FTPPLESFNLCHYTSQVPV-PPILGSYHM----KEEGVQLKVTVNFKLHESVRN--NFEV 353
Query: 450 CNVTMLFPRRRVVS-FDGTPSIGT--VSNNEHSVEWKIMTSGRALTGRSLEATFPGTVKF 506
C + F R ++ + S G V + + W I G+ +S+E + GT+ F
Sbjct: 354 CEAHIPFYNRGPITHLEYKASFGQLEVFREKSLLVWII---GQKFP-KSMEISLSGTLTF 409
Score = 53 (23.7 bits), Expect = 3.2e-17, Sum P(5) = 3.2e-17
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 6 SIRALWILNNFDA------VVFSRRFPVVERR 31
++RA+W++ + V FSRR+P VE+R
Sbjct: 2 ALRAVWLIRHEPGTPLGGTVRFSRRYPTVEKR 33
Score = 41 (19.5 bits), Expect = 3.2e-17, Sum P(5) = 3.2e-17
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 112 GGENHLLWPLILHVKGPYCILVLPQVE 138
GGE LWP+I ++ +P VE
Sbjct: 89 GGEE--LWPVIAFLRDSMIYASVPLVE 113
Score = 40 (19.1 bits), Expect = 2.5e-15, Sum P(5) = 2.5e-15
Identities = 29/122 (23%), Positives = 47/122 (38%)
Query: 361 PLTGLNSAH----VEVLSFHPSAQVPEQGVD-KQAVMFSPPLGNFVLMRYQAICGLGPPV 415
PL N H V V S + E+GV K V F L V ++ +C P
Sbjct: 304 PLESFNLCHYTSQVPVPPILGSYHMKEEGVQLKVTVNFK--LHESVRNNFE-VCEAHIP- 359
Query: 416 KGFYQLSMVSEDEGAFLFKLCLMESYKAPLTMEFCNVTMLFPRRRVVSFDGTPSIGTVSN 475
FY ++ E F +E ++ + + + FP+ +S GT + G +
Sbjct: 360 --FYNRGPITHLEYKASFGQ--LEVFREKSLLVWI-IGQKFPKSMEISLSGTLTFGVKGH 414
Query: 476 NE 477
N+
Sbjct: 415 NK 416
>ZFIN|ZDB-GENE-050522-231 [details] [associations]
symbol:ap5m1 "adaptor-related protein complex 5, mu
1 subunit" species:7955 "Danio rerio" [GO:0030131 "clathrin adaptor
complex" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] InterPro:IPR008968 Pfam:PF00928 PROSITE:PS51072
ZFIN:ZDB-GENE-050522-231 GO:GO:0006886 GO:GO:0016192 GO:GO:0030131
SUPFAM:SSF49447 GeneTree:ENSGT00390000006191 EMBL:BX548045
IPI:IPI00487429 Ensembl:ENSDART00000142123 ArrayExpress:F1Q5F9
Bgee:F1Q5F9 Uniprot:F1Q5F9
Length = 488
Score = 137 (53.3 bits), Expect = 9.8e-17, Sum P(4) = 9.8e-17
Identities = 75/267 (28%), Positives = 116/267 (43%)
Query: 262 ALRSFISSAMPFGTPVDLSY-SNIFAIKVNGFPSSELPPQDLKQPAWKPYLYKGKQRLLF 320
AL S + P G P+D+ S + V PS P KQPAWK +++G+ +
Sbjct: 161 ALPSVLLQVCPLGRPLDIPPPSGLVPSAVA--PS---PGGAQKQPAWKAGVHRGRAVVSV 215
Query: 321 TIHETVHAAMYDRDEIPDSLSVSGQINCRAELEG-MPDVSFPLT-GLNSAHVEVLSFHPS 378
+ E V + Y + D V G C E+EG +P+V+ LT N + ++ + HP
Sbjct: 216 ALTEKVRSMQYGKSSRQDIWDVYGV--C--EVEGVLPNVTVTLTLPPNGSPLQDILVHPC 271
Query: 379 AQVPEQGV---------DKQAVM------FSPPLGNFVLMRYQAICGLGPPVKGFYQLSM 423
+ + D A FSPPL F L Y + + PP+ G YQL
Sbjct: 272 VTSLDASILTACSVDENDGSAFSGPYKFPFSPPLELFRLCSYTSQVPV-PPILGSYQLK- 329
Query: 424 VSEDEGAFLFKLCLMESYKAPLTMEFCNVTMLFPRRRVV-SFDGTPSIGT--VSNNEHSV 480
E+ L L ES K + E+C + F + ++ S + S G VS ++ +
Sbjct: 330 AEENHLKVNVVLKLHESVKN--SFEYCEAHIPFFNQNLMGSVEVKVSSGQLEVSKEKNLL 387
Query: 481 EWKIMTSGRALTGRSLEATFPGTVKFA 507
W + G+ +S EAT G+V F+
Sbjct: 388 VWVL---GQKFP-KSREATLEGSVHFS 410
Score = 109 (43.4 bits), Expect = 9.8e-17, Sum P(4) = 9.8e-17
Identities = 18/63 (28%), Positives = 34/63 (53%)
Query: 556 EPFCWQAYNYAKVSFKIIGASISGMSIDPKSVSIYPAVKAPVEFSAQVTSGDYILWNTLG 615
+P C Y K+ F++ ++SG +D SV +Y + K + + ++ S +Y +WN+ G
Sbjct: 418 DPLCTGLTAYVKLYFRVPDLTLSGCCVDQHSVQVYSSAKPRIVTTRELVSSEYYIWNSTG 477
Query: 616 KCP 618
P
Sbjct: 478 DAP 480
Score = 67 (28.6 bits), Expect = 9.8e-17, Sum P(4) = 9.8e-17
Identities = 24/65 (36%), Positives = 34/65 (52%)
Query: 6 SIRALWILNNFDA----VVFSRRFPVVERRWREACKTENESCIEDPIKYNVLP-LVPTDS 60
SIRALW++++ V FSRRFP VE R + + + ED V+P L+ T+
Sbjct: 2 SIRALWVVSHEKGESGKVRFSRRFPTVEFRAKSLAGSHYVAVPED----RVIPQLLLTEL 57
Query: 61 ELASA 65
L A
Sbjct: 58 GLVDA 62
Score = 52 (23.4 bits), Expect = 9.8e-17, Sum P(4) = 9.8e-17
Identities = 16/47 (34%), Positives = 24/47 (51%)
Query: 95 DDPITRH---VIGLYIDTEEGGENHLLWPLILHVKGPYCILVLPQVE 138
DD +H + L ID + GG+ LWP++ +G + LP VE
Sbjct: 71 DDCAHQHRSPAVELLIDGQ-GGKT--LWPVLTVTQGTLILACLPLVE 114
>RGD|1308087 [details] [associations]
symbol:Ap5m1 "adaptor-related protein complex 5, mu 1 subunit"
species:10116 "Rattus norvegicus" [GO:0005764 "lysosome"
evidence=ISO;ISS] [GO:0005765 "lysosomal membrane" evidence=IEA]
[GO:0005770 "late endosome" evidence=ISO;ISS] [GO:0005829 "cytosol"
evidence=ISO;ISS] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=ISO;ISS] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0016197 "endosomal
transport" evidence=ISO;ISS] [GO:0030119 "AP-type membrane coat
adaptor complex" evidence=ISO;ISS] [GO:0030131 "clathrin adaptor
complex" evidence=IEA] [GO:0031902 "late endosome membrane"
evidence=IEA] InterPro:IPR008968 Pfam:PF00928 PROSITE:PS51072
RGD:1308087 GO:GO:0005829 GO:GO:0006886 GO:GO:0016192 GO:GO:0031902
GO:GO:0005765 GO:GO:0005764 GO:GO:0016197 GO:GO:0005770
GO:GO:0030131 GO:GO:0030119 SUPFAM:SSF49447 CTD:55745
eggNOG:NOG330107 GeneTree:ENSGT00390000006191 HOGENOM:HOG000113695
OMA:CKCDLEG OrthoDB:EOG4X3H19 EMBL:BC099829 IPI:IPI00201493
RefSeq:NP_001025207.1 UniGene:Rn.162064 ProteinModelPortal:Q499N2
PhosphoSite:Q499N2 PRIDE:Q499N2 Ensembl:ENSRNOT00000018972
GeneID:305861 KEGG:rno:305861 UCSC:RGD:1308087 InParanoid:Q499N2
NextBio:655153 Genevestigator:Q499N2 Uniprot:Q499N2
Length = 490
Score = 154 (59.3 bits), Expect = 1.9e-14, Sum P(4) = 1.9e-14
Identities = 74/267 (27%), Positives = 116/267 (43%)
Query: 263 LRSFISSAMPFGTPVDLSYSNIFAIKVNGFPSSELPPQDLKQPAWKPYLYKGKQRLLFTI 322
L + A P GT +D + N ++ F S P KQPAWK YKGK ++ +I
Sbjct: 159 LPDLLLQACPLGTLLDANLQN--SLNSLNFVSVTQPQ---KQPAWKVGTYKGKAQISISI 213
Query: 323 HETVHAAMYDRDEIPDSLSVSGQINCRAELEG-MPDVSFPLT-GLNSAHVEVLSFHP--- 377
E V + Y + +I D+ V G + C+ +LEG MP+V+ L N + ++ + HP
Sbjct: 214 TENVKSMQYGKQDIADTWQVVGTVACKCDLEGVMPNVTISLNLPTNGSPLQDIIVHPCVT 273
Query: 378 ---SAQVPEQGVDK-QAVMFSPPLG-NFV--LMRYQAICGLG-----PPVKGFYQLSMVS 425
SA + +D FS P F L + +C PP+ G Y +
Sbjct: 274 SLDSAILTSSSIDTVDDSAFSGPYKFPFTPPLESFN-LCHYTSQVPVPPILGSYHM---- 328
Query: 426 EDEGAFL---FKLCLMESYKAPLTMEFCNVTMLFPRRRVVS-FDGTPSIGT--VSNNEHS 479
+++GA L L L ES + E C + F R ++ + S G V +
Sbjct: 329 KEDGAQLKITVNLKLHESVRN--NFEICEAHIPFYNRGPITHLEYKVSFGQLEVFREKSL 386
Query: 480 VEWKIMTSGRALTGRSLEATFPGTVKF 506
+ W I G+ +S+E + GT+ F
Sbjct: 387 LVWII---GQKFP-KSMEISLSGTLTF 409
Score = 89 (36.4 bits), Expect = 1.9e-14, Sum P(4) = 1.9e-14
Identities = 18/66 (27%), Positives = 34/66 (51%)
Query: 556 EPF---CWQAYNYAKVSFKIIGASISGMSIDPKSVSIYPAVKAPVEFSAQVTSGDYILWN 612
+PF C + Y K++F+I +++G D SV ++ + K + ++ S DY +WN
Sbjct: 417 QPFDHICIGSTAYVKLNFRIADYTLTGCYADQHSVQVFASGKPKISAYRKLISSDYYIWN 476
Query: 613 TLGKCP 618
+ P
Sbjct: 477 SKASAP 482
Score = 54 (24.1 bits), Expect = 1.9e-14, Sum P(4) = 1.9e-14
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 6 SIRALWILNNFDA------VVFSRRFPVVERR 31
++RA+W++ + V FSRR+P VE+R
Sbjct: 2 ALRAVWLIRHEPGTPLGGTVKFSRRYPTVEKR 33
Score = 43 (20.2 bits), Expect = 1.9e-14, Sum P(4) = 1.9e-14
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 112 GGENHLLWPLILHVKGPYCILVLPQVE 138
GGE+ LWP+I ++ +P VE
Sbjct: 89 GGED--LWPVIAFLRNDMIYASVPLVE 113
>RGD|70969 [details] [associations]
symbol:Ap3m2 "adaptor-related protein complex 3, mu 2 subunit"
species:10116 "Rattus norvegicus" [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0007269 "neurotransmitter secretion" evidence=NAS]
[GO:0008089 "anterograde axon cargo transport" evidence=ISO;ISS]
[GO:0030131 "clathrin adaptor complex" evidence=IEA] [GO:0030659
"cytoplasmic vesicle membrane" evidence=IEA] [GO:0046907
"intracellular transport" evidence=NAS] [GO:0048490 "anterograde
synaptic vesicle transport" evidence=ISO;ISS] InterPro:IPR001392
InterPro:IPR008968 InterPro:IPR011012 InterPro:IPR018240
Pfam:PF00928 PIRSF:PIRSF005992 PRINTS:PR00314 PROSITE:PS00990
PROSITE:PS00991 PROSITE:PS51072 RGD:70969 GO:GO:0005794
GO:GO:0006886 GO:GO:0030659 GO:GO:0008089 GO:GO:0007269
GO:GO:0030131 GeneTree:ENSGT00530000062779 InterPro:IPR022775
Pfam:PF01217 SUPFAM:SSF49447 SUPFAM:SSF64356 GO:GO:0048490
eggNOG:NOG298719 HOGENOM:HOG000234366 HOVERGEN:HBG104910 KO:K12398
OrthoDB:EOG4CC41C CTD:10947 OMA:PVIATPH EMBL:L07074 EMBL:BC086993
IPI:IPI00211997 PIR:I63224 RefSeq:NP_579839.1 UniGene:Rn.11007
ProteinModelPortal:P53678 STRING:P53678 PhosphoSite:P53678
PRIDE:P53678 Ensembl:ENSRNOT00000025675 GeneID:140667
KEGG:rno:140667 UCSC:RGD:70969 InParanoid:P53678 NextBio:620643
Genevestigator:P53678 GermOnline:ENSRNOG00000018650 Uniprot:P53678
Length = 418
Score = 123 (48.4 bits), Expect = 0.00020, P = 0.00020
Identities = 45/179 (25%), Positives = 81/179 (45%)
Query: 296 ELPPQDLKQPAWKPYLYK-GKQRLLFTIHETVHAAMYDRDEIPDSLSVSGQINCRAELEG 354
+LP L W+ K F + E + A + D+ + + G I+ +L G
Sbjct: 156 QLPTGQLSVVPWRRTGVKYTNNEAYFDVVEEIDAII-DKSGSTVTAEIQGVIDACVKLTG 214
Query: 355 MPDVSFPLTGLNSAHVEVLSFHPSAQVPEQGVDKQAVMFSPPLGNFVLMRYQAICGLGPP 414
MPD++ L+ +N ++ +SFHP + ++ ++ + F PP GNF L+ Y
Sbjct: 215 MPDLT--LSFMNPRLLDDVSFHPCVRF-KRWESERILSFIPPDGNFRLLSYHVSAQNLVA 271
Query: 415 VKGFYQLSMVSEDEGAF-LFKLCLMESYKAPLTMEFCNVTMLFPRRRVVSFDGTPSIGT 472
+ + + S+ D G+ F++ + T+E VT P+ V++ TPS GT
Sbjct: 272 IPVYVKHSISFRDSGSLGRFEITVGPKQTMGKTIEGVTVTSQMPKG-VLNMSLTPSQGT 329
>DICTYBASE|DDB_G0277901 [details] [associations]
symbol:apm3 "clathrin-adaptor medium chain AP-3"
species:44689 "Dictyostelium discoideum" [GO:0009267 "cellular
response to starvation" evidence=IMP] [GO:0006907 "pinocytosis"
evidence=IMP] [GO:0031201 "SNARE complex" evidence=IDA] [GO:0030123
"AP-3 adaptor complex" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0007032 "endosome organization" evidence=IMP]
[GO:0006886 "intracellular protein transport" evidence=IEA;ISS]
[GO:0005768 "endosome" evidence=IEA;ISS] [GO:0005764 "lysosome"
evidence=ISS] [GO:0030131 "clathrin adaptor complex" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0006897
"endocytosis" evidence=IEA] [GO:0010008 "endosome membrane"
evidence=IEA] InterPro:IPR001392 InterPro:IPR008968
InterPro:IPR011012 InterPro:IPR018240 Pfam:PF00928
PIRSF:PIRSF005992 PRINTS:PR00314 PROSITE:PS00990 PROSITE:PS00991
PROSITE:PS51072 dictyBase:DDB_G0277901 GO:GO:0006886
GenomeReviews:CM000152_GR GO:GO:0005768 EMBL:AAFI02000023
GO:GO:0005764 GO:GO:0010008 GO:GO:0009267 GO:GO:0007032
GO:GO:0030131 InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF49447
SUPFAM:SSF64356 HSSP:P84092 GO:GO:0031201 GO:GO:0030123
eggNOG:NOG298719 KO:K12398 EMBL:AY007279 RefSeq:XP_642328.1
ProteinModelPortal:Q9GPF1 STRING:Q9GPF1 EnsemblProtists:DDB0214930
GeneID:8621534 KEGG:ddi:DDB_G0277901 OMA:XMLSWDV
ProtClustDB:CLSZ2430778 GO:GO:0006907 Uniprot:Q9GPF1
Length = 421
Score = 125 (49.1 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 50/194 (25%), Positives = 82/194 (42%)
Query: 297 LPPQDLKQPAWKPYLYKGKQ-RLLFTIHETVHAAMYDRDEIPDSLSVSGQINCRAELEGM 355
LP L W+ K Q ++ F I E + + I S ++G+I C L GM
Sbjct: 159 LPNGSLGAIQWRKTGIKYTQNKIFFDIIEEIDCIIDSNGYIVSS-EINGEILCHCNLSGM 217
Query: 356 PDVSFPLTGLNSAHVEVLSFHPSAQVPEQGVDKQAVMFSPPLGNFVLMRYQAICGLGP-P 414
PD++ +T N ++ +SFHP + D+ + F PP GNF L+ Y+ + G+ P
Sbjct: 218 PDLT--MTFNNPRMLDDVSFHPCVRYSRWENDR-VLSFIPPDGNFKLLSYR-VKGINQFP 273
Query: 415 VKGFYQLSMVSEDEGAFLFKLCL-MESYKAPLTMEFCNVTMLFPRRRVVSFDG-TPSIGT 472
V Q+S + + + Y + +V P + S T +IG+
Sbjct: 274 VYVKPQISYSEGSSSVGRVNVTVGAKGYNVQNKLSIEDVVATIPFSKTTSSTNLTANIGS 333
Query: 473 VSNNEHS--VEWKI 484
+E S + W I
Sbjct: 334 FGMDEQSKILRWNI 347
Score = 38 (18.4 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 568 VSFKIIGASISGMSIDPKSVS 588
+ FKI +ISG++ID + S
Sbjct: 379 LQFKIPQYAISGLTIDSLACS 399
>UNIPROTKB|E1B763 [details] [associations]
symbol:AP3M2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048490 "anterograde synaptic vesicle transport"
evidence=IEA] [GO:0008089 "anterograde axon cargo transport"
evidence=IEA] [GO:0030131 "clathrin adaptor complex" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
InterPro:IPR001392 InterPro:IPR008968 InterPro:IPR011012
InterPro:IPR018240 Pfam:PF00928 PIRSF:PIRSF005992 PRINTS:PR00314
PROSITE:PS00990 PROSITE:PS00991 PROSITE:PS51072 GO:GO:0006886
GO:GO:0016192 GO:GO:0030131 GeneTree:ENSGT00530000062779
InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF49447 SUPFAM:SSF64356
KO:K12398 CTD:10947 OMA:PVIATPH EMBL:DAAA02060950 IPI:IPI00732617
RefSeq:NP_001180169.1 UniGene:Bt.44805 Ensembl:ENSBTAT00000001640
GeneID:509427 KEGG:bta:509427 NextBio:20868964 Uniprot:E1B763
Length = 418
Score = 118 (46.6 bits), Expect = 0.00071, P = 0.00071
Identities = 46/180 (25%), Positives = 80/180 (44%)
Query: 296 ELPPQDLKQPAWKPYLYK-GKQRLLFTIHETVHAAMYDRDEIPDSLSVSGQINCRAELEG 354
+LP L W+ K F + E + A + D+ + + G I+ +L G
Sbjct: 156 QLPTGQLSVVPWRRTGVKYTNNEAYFDVIEEIDAII-DKSGSTITAEIQGVIDACVKLTG 214
Query: 355 MPDVSFPLTGLNSAHVEVLSFHPSAQVPEQGVDKQAVMFSPPLGNFVLMRYQAICG--LG 412
MPD++ L+ +N ++ +SFHP + ++ ++ + F PP GNF L+ Y +
Sbjct: 215 MPDLT--LSFMNPRLLDDVSFHPCVRF-KRWESERILSFIPPDGNFRLLSYHVSAQNLVA 271
Query: 413 PPVKGFYQLSMVSEDEGAFLFKLCLMESYKAPLTMEFCNVTMLFPRRRVVSFDGTPSIGT 472
PV + +S + F++ + T+E VT PR V++ TPS GT
Sbjct: 272 IPVYVKHNISF-RDSSSLGRFEITVGPKQTMGKTIEGVTVTSQMPRG-VLNMSLTPSQGT 329
>UNIPROTKB|E5RJ52 [details] [associations]
symbol:AP3M2 "AP-3 complex subunit mu-2" species:9606 "Homo
sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0030131 "clathrin adaptor complex" evidence=IEA]
[GO:0008089 "anterograde axon cargo transport" evidence=IEA]
[GO:0048490 "anterograde synaptic vesicle transport" evidence=IEA]
InterPro:IPR008968 InterPro:IPR018240 Pfam:PF00928 PROSITE:PS00990
PROSITE:PS00991 PROSITE:PS51072 GO:GO:0006886 GO:GO:0016192
GO:GO:0030131 SUPFAM:SSF49447 HGNC:HGNC:570 EMBL:AC103724
IPI:IPI00985074 ProteinModelPortal:E5RJ52 SMR:E5RJ52
Ensembl:ENST00000521280 ArrayExpress:E5RJ52 Bgee:E5RJ52
Uniprot:E5RJ52
Length = 287
Score = 115 (45.5 bits), Expect = 0.00076, P = 0.00076
Identities = 45/180 (25%), Positives = 80/180 (44%)
Query: 296 ELPPQDLKQPAWKPYLYK-GKQRLLFTIHETVHAAMYDRDEIPDSLSVSGQINCRAELEG 354
+LP L W+ K F + E + A + D+ + + G I+ +L G
Sbjct: 41 QLPTGQLSVVPWRRTGVKYTNNEAYFDVIEEIDAII-DKSGSTITAEIQGVIDACVKLTG 99
Query: 355 MPDVSFPLTGLNSAHVEVLSFHPSAQVPEQGVDKQAVMFSPPLGNFVLMRYQAICG--LG 412
MPD++ L+ +N ++ +SFHP + ++ ++ + F PP GNF L+ Y +
Sbjct: 100 MPDLT--LSFMNPRLLDDVSFHPCVRF-KRWESERILSFIPPDGNFRLLSYHVSAQNLVA 156
Query: 413 PPVKGFYQLSMVSEDEGAFLFKLCLMESYKAPLTMEFCNVTMLFPRRRVVSFDGTPSIGT 472
PV + +S + F++ + T+E VT P+ V++ TPS GT
Sbjct: 157 IPVYVKHNISF-RDSSSLGRFEITVGPKQTMGKTIEGVTVTSQMPKG-VLNMSLTPSQGT 214
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.135 0.414 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 625 557 0.00098 119 3 11 22 0.40 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 16
No. of states in DFA: 626 (67 KB)
Total size of DFA: 333 KB (2168 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 44.59u 0.09s 44.68t Elapsed: 00:00:02
Total cpu time: 44.59u 0.09s 44.68t Elapsed: 00:00:02
Start: Sat May 11 03:33:59 2013 End: Sat May 11 03:34:01 2013