BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006936
(625 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9H0R1|AP5M1_HUMAN AP-5 complex subunit mu-1 OS=Homo sapiens GN=AP5M1 PE=1 SV=2
Length = 490
Score = 96.7 bits (239), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 99/376 (26%), Positives = 154/376 (40%), Gaps = 72/376 (19%)
Query: 263 LRSFISSAMPFGTPVDLSYSNIFAIKVNGFPSSELPPQDLKQPAWKPYLYKGKQRLLFTI 322
L + A PFGT +D + N ++ F S P KQPAWK YKGK ++ +I
Sbjct: 159 LPDLLLQACPFGTLLDANLQN--SLDNTNFASVTQPQ---KQPAWKTGTYKGKPQVSISI 213
Query: 323 HETVHAAMYDRDEIPDSLSVSGQINCRAELEG-MPDVSFPLT-GLNSAHVEVLSFHP--- 377
E V + YD+ I D+ V G + C+ +LEG MP+V+ L+ N + ++ + HP
Sbjct: 214 TEKVKSMQYDKQGIADTWQVVGTVTCKCDLEGIMPNVTISLSLPTNGSPLQDILVHPCVT 273
Query: 378 ---SAQVPEQGVDKQ---------AVMFSPPLGNFVLMRYQAICGLGPPVKGFYQLSMVS 425
SA + +D F+PPL +F L Y + + PP+ GFYQ+
Sbjct: 274 SLDSAILTSSSIDAMDDSAFSGPYKFPFTPPLESFNLCFYTSQVPV-PPILGFYQMKE-E 331
Query: 426 EDEGAFLFKLCLMESYKAPLTMEFCNVTMLFPRRR-VVSFDGTPSIGT--VSNNEHSVEW 482
E + L L ES K EFC + F R + + S G V + + W
Sbjct: 332 EVQLRITINLKLHESVKN--NFEFCEAHIPFYNRGPITHLEYKTSFGQLEVFREKSLLIW 389
Query: 483 KIMTSGRALTGRSLEATFPGTVKFAPWQTQRSSSGGTVDEDSDIETDNTNNVVNIEEFLM 542
I G+ +S+E + GTV F ++
Sbjct: 390 II---GQKFP-KSMEISLSGTVTFGAKSHEKQ---------------------------- 417
Query: 543 EKMNMDLPPVDLEEPFCWQAYNYAKVSFKIIGASISGMSIDPKSVSIYPAVKAPVEFSAQ 602
P D P C Y K+ F+I+ +++G D SV ++ + K + +
Sbjct: 418 --------PFD---PICTGETAYLKLHFRILDYTLTGCYADQHSVQVFASGKPKISAHRK 466
Query: 603 VTSGDYILWNTLGKCP 618
+ S DY +WN+ P
Sbjct: 467 LISSDYYIWNSKAPAP 482
>sp|Q4R6Q7|AP5M1_MACFA AP-5 complex subunit mu-1 OS=Macaca fascicularis GN=AP5M1 PE=2 SV=1
Length = 490
Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 99/376 (26%), Positives = 152/376 (40%), Gaps = 72/376 (19%)
Query: 263 LRSFISSAMPFGTPVDLSYSNIFAIKVNGFPSSELPPQDLKQPAWKPYLYKGKQRLLFTI 322
L + A PFGT +D + N ++ F S P KQPAWK YKGK ++ +I
Sbjct: 159 LPDLLLQACPFGTLLDANLKN--SLDNTNFASVTQPQ---KQPAWKTGTYKGKPQVSISI 213
Query: 323 HETVHAAMYDRDEIPDSLSVSGQINCRAELEG-MPDVSFPLT-GLNSAHVEVLSFHP--- 377
E V + YD+ I D+ V G + C+ +LEG MP+V+ L N + ++ + HP
Sbjct: 214 TEKVKSMQYDKQGIADTWQVVGTVTCKCDLEGIMPNVTISLNLPTNGSPLQDILVHPCVT 273
Query: 378 ---SAQVPEQGVDKQ---------AVMFSPPLGNFVLMRYQAICGLGPPVKGFYQLSMVS 425
SA + +D +PPL +F L Y + + PP+ GFYQL
Sbjct: 274 SLDSAILTSSSIDAMDDSAFSGPYKFPLTPPLESFNLCYYTSQVPV-PPILGFYQLKE-E 331
Query: 426 EDEGAFLFKLCLMESYKAPLTMEFCNVTMLFPRRR-VVSFDGTPSIGT--VSNNEHSVEW 482
E + L L ES K EFC + F R + + S G V + + W
Sbjct: 332 EVQLRITINLKLHESVKN--NFEFCEAHIPFYNRGPITHLEYKTSFGQLEVFREKSLLIW 389
Query: 483 KIMTSGRALTGRSLEATFPGTVKFAPWQTQRSSSGGTVDEDSDIETDNTNNVVNIEEFLM 542
I G+ +S+E + GTV F ++
Sbjct: 390 II---GQKFP-KSMEISLSGTVTFGAKSHEKQ---------------------------- 417
Query: 543 EKMNMDLPPVDLEEPFCWQAYNYAKVSFKIIGASISGMSIDPKSVSIYPAVKAPVEFSAQ 602
P D P C Y K+ F+I+ +++G D SV ++ + K + +
Sbjct: 418 --------PFD---PICIGETAYLKLHFRILDYTLTGCYADQHSVQVFASGKPKISAYRK 466
Query: 603 VTSGDYILWNTLGKCP 618
+ S DY +WN+ P
Sbjct: 467 LISSDYYIWNSKAPAP 482
>sp|Q5E9X5|AP5M1_BOVIN AP-5 complex subunit mu-1 OS=Bos taurus GN=AP5M1 PE=2 SV=1
Length = 490
Score = 93.2 bits (230), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 95/367 (25%), Positives = 152/367 (41%), Gaps = 72/367 (19%)
Query: 272 PFGTPVDLSYSNIFAIKVNGFPSSELPPQDLKQPAWKPYLYKGKQRLLFTIHETVHAAMY 331
PFGT +D + N +N + L KQPAWK YKGK ++ +I E V++ Y
Sbjct: 168 PFGTLLDANLQNSLD-SINSASVTHLQ----KQPAWKTGTYKGKPQVSISITEKVNSMQY 222
Query: 332 DRDEIPDSLSVSGQINCRAELEG-MPDVSFPLT-GLNSAHVEVLSFHP------SAQVPE 383
D+ EI D+ V G + C+ +LEG MP+V+ L+ N + ++ + HP SA +
Sbjct: 223 DKQEIADTWQVVGVVTCKCDLEGSMPNVTISLSLPTNGSPLQDILVHPCVTSLDSAILTS 282
Query: 384 QGVDKQ---------AVMFSPPLGNFVLMRYQAICGLGPPVKGFYQLSMVSEDEGAFLFK 434
+D +PPL +F L Y + + PP+ GFYQ+ E +
Sbjct: 283 SSIDAMDDSAFSGPYKFPLTPPLESFNLCYYTSQVPV-PPILGFYQVKE-EEVQLKITVN 340
Query: 435 LCLMESYKAPLTMEFCNVTMLFPRRR-VVSFDGTPSIGT--VSNNEHSVEWKIMTSGRAL 491
L L ES K + EFC + F R + + S G V + + W I G+
Sbjct: 341 LKLHESVKN--SFEFCEAHIPFYNRGPITHVEYKASFGQLEVFREKSLLVWII---GQKF 395
Query: 492 TGRSLEATFPGTVKFAPWQTQRSSSGGTVDEDSDIETDNTNNVVNIEEFLMEKMNMDLPP 551
+S+E + GT+ F N + P
Sbjct: 396 P-KSMEISLSGTITFG------------------------------------AKNHEKQP 418
Query: 552 VDLEEPFCWQAYNYAKVSFKIIGASISGMSIDPKSVSIYPAVKAPVEFSAQVTSGDYILW 611
D C Y K+ F+I+ +++G +D SV ++ + K + ++ S DY +W
Sbjct: 419 FD---QICIGGTAYLKLHFRILDYTLTGCYVDQHSVQVFASGKPKISTYRKLISSDYYIW 475
Query: 612 NTLGKCP 618
N+ P
Sbjct: 476 NSKAPAP 482
>sp|Q499N2|AP5M1_RAT AP-5 complex subunit mu-1 OS=Rattus norvegicus GN=Ap5m1 PE=2 SV=1
Length = 490
Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 96/379 (25%), Positives = 158/379 (41%), Gaps = 78/379 (20%)
Query: 263 LRSFISSAMPFGTPVDLSYSNIFAIKVNGFPSSELPPQDLKQPAWKPYLYKGKQRLLFTI 322
L + A P GT +D + N ++ F S P KQPAWK YKGK ++ +I
Sbjct: 159 LPDLLLQACPLGTLLDANLQN--SLNSLNFVSVTQPQ---KQPAWKVGTYKGKAQISISI 213
Query: 323 HETVHAAMYDRDEIPDSLSVSGQINCRAELEG-MPDVSFPLT-GLNSAHVEVLSFHP--- 377
E V + Y + +I D+ V G + C+ +LEG MP+V+ L N + ++ + HP
Sbjct: 214 TENVKSMQYGKQDIADTWQVVGTVACKCDLEGVMPNVTISLNLPTNGSPLQDIIVHPCVT 273
Query: 378 ---SAQVPEQGVDK---------QAVMFSPPLGNFVLMRYQAICGLGPPVKGFYQLSMVS 425
SA + +D F+PPL +F L Y + + PP+ G Y +
Sbjct: 274 SLDSAILTSSSIDTVDDSAFSGPYKFPFTPPLESFNLCHYTSQVPV-PPILGSYHM---- 328
Query: 426 EDEGAFL---FKLCLMESYKAPLTMEFCNVTMLFPRRRVVSFDGTPSIGTVSNNEHSVEW 482
+++GA L L L ES + E C + F R G +++ E+ V +
Sbjct: 329 KEDGAQLKITVNLKLHESVRN--NFEICEAHIPFYNR-----------GPITHLEYKVSF 375
Query: 483 KIMTSGRALTGRSLEATFPGTVKFAPWQTQRSSSGGTVDEDSDIETDNTNNVVNIEEFLM 542
+ R +SL G KF ++ S GT+ F +
Sbjct: 376 GQLEVFRE---KSLLVWIIGQ-KFP--KSMEISLSGTL------------------TFRV 411
Query: 543 EKMNMDLPPVDLEEPF---CWQAYNYAKVSFKIIGASISGMSIDPKSVSIYPAVKAPVEF 599
+ N +PF C + Y K++F+I +++G D SV ++ + K +
Sbjct: 412 QGHN--------RQPFDHICIGSTAYVKLNFRIADYTLTGCYADQHSVQVFASGKPKISA 463
Query: 600 SAQVTSGDYILWNTLGKCP 618
++ S DY +WN+ P
Sbjct: 464 YRKLISSDYYIWNSKASAP 482
>sp|Q8BJ63|AP5M1_MOUSE AP-5 complex subunit mu-1 OS=Mus musculus GN=Ap5m1 PE=1 SV=2
Length = 490
Score = 79.0 bits (193), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 94/382 (24%), Positives = 154/382 (40%), Gaps = 84/382 (21%)
Query: 263 LRSFISSAMPFGTPVDLSYSNIFAIKVNGFPSSELPPQDLKQPAWKPYLYKGKQRLLFTI 322
L + A P GT +D + N +N S + Q KQPAWK YKGK ++ +I
Sbjct: 159 LPDLLLQACPLGTLLDANLQN----SLNSINSVSVT-QPQKQPAWKVGAYKGKAQISISI 213
Query: 323 HETVHAAMYDRDEIPDSLSVSGQINCRAELEG-MPDVSFPLT-GLNSAHVEVLSFHP--- 377
ETV Y + +I D+ V+G + C+ +LEG MP V+ L+ N + ++ + HP
Sbjct: 214 TETVKCMQYGKQDIADTWQVAGTVACKCDLEGVMPAVTISLSLPTNGSPLQDIIVHPCVT 273
Query: 378 ---SAQVPEQGVDKQ---------AVMFSPPLGNFVLMRYQAICGLGPPVKGFYQLSMVS 425
SA + +D F+PPL +F L Y + + PP+ G Y +
Sbjct: 274 SLDSAILTSSSIDTMDDSAFSGPYKFPFTPPLESFNLCHYTSQVPV-PPILGSYHM---- 328
Query: 426 EDEGAFL---FKLCLMESYKAPLTMEFCNVTMLFPRRR-VVSFDGTPSIGT--VSNNEHS 479
++EG L L ES + E C + F R + + S G V +
Sbjct: 329 KEEGVQLKVTVNFKLHESVRN--NFEVCEAHIPFYNRGPITHLEYKASFGQLEVFREKSL 386
Query: 480 VEWKIMTSGRALTGRSLEATFPGTVKFAPWQTQRSSSGGTVDEDSDIETDNTNNVVNIEE 539
+ W I G+ +S+E + GT+ F ++ N
Sbjct: 387 LVWII---GQKFP-KSMEISLSGTLTFG------------------VKGHN--------- 415
Query: 540 FLMEKMNMDLPPVDLEEPF---CWQAYNYAKVSFKIIGASISGMSIDPKSVSIYPAVKAP 596
++PF C Y K++F+I +++G D SV ++ + K
Sbjct: 416 ---------------KQPFDHICIGNTAYIKLNFRIADYTLTGCYADQHSVQVFASGKPK 460
Query: 597 VEFSAQVTSGDYILWNTLGKCP 618
+ ++ S DY +WN+ P
Sbjct: 461 ISAYRKLISSDYYIWNSKAPAP 482
>sp|Q9GPF1|AP3M_DICDI AP-3 complex subunit mu OS=Dictyostelium discoideum GN=apm3 PE=2
SV=1
Length = 421
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 50/111 (45%), Gaps = 3/111 (2%)
Query: 297 LPPQDLKQPAWKPYLYKGKQRLLFTIHETVHAAMYDRDEIPDSLSVSGQINCRAELEGMP 356
LP L W+ K Q +F + D + S ++G+I C L GMP
Sbjct: 159 LPNGSLGAIQWRKTGIKYTQNKIFFDIIEEIDCIIDSNGYIVSSEINGEILCHCNLSGMP 218
Query: 357 DVSFPLTGLNSAHVEVLSFHPSAQVPEQGVDKQAVMFSPPLGNFVLMRYQA 407
D++ +T N ++ +SFHP + D+ + F PP GNF L+ Y+
Sbjct: 219 DLT--MTFNNPRMLDDVSFHPCVRYSRWENDR-VLSFIPPDGNFKLLSYRV 266
>sp|P47795|AP1M_DIPOM AP-1 complex subunit mu OS=Diplobatis ommata PE=2 SV=1
Length = 418
Score = 42.0 bits (97), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 54/113 (47%), Gaps = 5/113 (4%)
Query: 296 ELPPQDLKQPAWKPYLYK-GKQRLLFTIHETVHAAMYDRDEIPDSLSVSGQINCRAELEG 354
+LP L W+ K F + E + A + D+ + G I+ +L G
Sbjct: 156 QLPTGQLSNIPWRRVGVKYTNNEAYFDVTEEIDAII-DKSGSTVFAEIQGVIDACIKLTG 214
Query: 355 MPDVSFPLTGLNSAHVEVLSFHPSAQVPEQGVDKQAVMFSPPLGNFVLMRYQA 407
MPD++ L+ LN ++ +SFHP + ++ ++ + F PP+GNF LM Y
Sbjct: 215 MPDLT--LSFLNPRLLDDVSFHPCVRF-KRWESERVLSFIPPVGNFRLMSYHV 264
>sp|P53676|AP3M1_RAT AP-3 complex subunit mu-1 OS=Rattus norvegicus GN=Ap3m1 PE=2 SV=1
Length = 418
Score = 40.4 bits (93), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 68/135 (50%), Gaps = 7/135 (5%)
Query: 342 VSGQINCRAELEGMPDVSFPLTGLNSAHVEVLSFHPSAQVPEQGVDKQAVMFSPPLGNFV 401
+ G I+ +L GMPD+S L+ +N ++ +SFHP + ++ ++ + F PP GNF
Sbjct: 202 IQGVIDACIKLSGMPDLS--LSFMNPRLLDDVSFHPCIRF-KRWESERVLSFIPPDGNFR 258
Query: 402 LMRYQAICG--LGPPVKGFYQLSMVSEDEGAFLFKLCLMESYKAPLTMEFCNVTMLFPRR 459
L+ Y+ + PV + +S E+ F + + T+E VT+ P +
Sbjct: 259 LISYRVSSQNLVAIPVYVKHNISF-KENSSCGRFDITIGPKQNMGKTIEGITVTVHMP-K 316
Query: 460 RVVSFDGTPSIGTVS 474
V++ + TP+ G+ +
Sbjct: 317 VVLNMNLTPTQGSYT 331
>sp|Q9JKC8|AP3M1_MOUSE AP-3 complex subunit mu-1 OS=Mus musculus GN=Ap3m1 PE=1 SV=1
Length = 418
Score = 40.0 bits (92), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 68/135 (50%), Gaps = 7/135 (5%)
Query: 342 VSGQINCRAELEGMPDVSFPLTGLNSAHVEVLSFHPSAQVPEQGVDKQAVMFSPPLGNFV 401
+ G I+ +L GMPD+S L+ +N ++ +SFHP + ++ ++ + F PP GNF
Sbjct: 202 IQGVIDACIKLSGMPDLS--LSFMNPRLLDDVSFHPCIRF-KRWESERVLSFIPPDGNFR 258
Query: 402 LMRYQAICG--LGPPVKGFYQLSMVSEDEGAFLFKLCLMESYKAPLTMEFCNVTMLFPRR 459
L+ Y+ + PV + +S E+ F + + T+E VT+ P +
Sbjct: 259 LISYRVSSQNLVAIPVYVKHSISF-KENSSCGRFDITIGPKQNMGKTIEGITVTVHMP-K 316
Query: 460 RVVSFDGTPSIGTVS 474
V++ + TP+ G+ +
Sbjct: 317 VVLNMNLTPTQGSYT 331
>sp|Q5R478|AP3M1_PONAB AP-3 complex subunit mu-1 OS=Pongo abelii GN=AP3M1 PE=2 SV=1
Length = 418
Score = 40.0 bits (92), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 68/135 (50%), Gaps = 7/135 (5%)
Query: 342 VSGQINCRAELEGMPDVSFPLTGLNSAHVEVLSFHPSAQVPEQGVDKQAVMFSPPLGNFV 401
+ G I+ +L GMPD+S L+ +N ++ +SFHP + ++ ++ + F PP GNF
Sbjct: 202 IQGVIDACIKLSGMPDLS--LSFMNPRLLDDVSFHPCIRF-KRWESERVLSFIPPDGNFR 258
Query: 402 LMRYQAICG--LGPPVKGFYQLSMVSEDEGAFLFKLCLMESYKAPLTMEFCNVTMLFPRR 459
L+ Y+ + PV + +S E+ F + + T+E VT+ P +
Sbjct: 259 LISYRVSSQNLVAIPVYVKHSISF-KENSSCGRFDITIGPKQNMGKTIEGITVTVHMP-K 316
Query: 460 RVVSFDGTPSIGTVS 474
V++ + TP+ G+ +
Sbjct: 317 VVLNMNLTPTQGSYT 331
>sp|Q9Y2T2|AP3M1_HUMAN AP-3 complex subunit mu-1 OS=Homo sapiens GN=AP3M1 PE=1 SV=1
Length = 418
Score = 40.0 bits (92), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 68/135 (50%), Gaps = 7/135 (5%)
Query: 342 VSGQINCRAELEGMPDVSFPLTGLNSAHVEVLSFHPSAQVPEQGVDKQAVMFSPPLGNFV 401
+ G I+ +L GMPD+S L+ +N ++ +SFHP + ++ ++ + F PP GNF
Sbjct: 202 IQGVIDACIKLSGMPDLS--LSFMNPRLLDDVSFHPCIRF-KRWESERVLSFIPPDGNFR 258
Query: 402 LMRYQAICG--LGPPVKGFYQLSMVSEDEGAFLFKLCLMESYKAPLTMEFCNVTMLFPRR 459
L+ Y+ + PV + +S E+ F + + T+E VT+ P +
Sbjct: 259 LISYRVSSQNLVAIPVYVKHSISF-KENSSCGRFDITIGPKQNMGKTIEGITVTVHMP-K 316
Query: 460 RVVSFDGTPSIGTVS 474
V++ + TP+ G+ +
Sbjct: 317 VVLNMNLTPTQGSYT 331
>sp|Q24K11|AP3M1_BOVIN AP-3 complex subunit mu-1 OS=Bos taurus GN=AP3M1 PE=2 SV=1
Length = 418
Score = 40.0 bits (92), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 68/135 (50%), Gaps = 7/135 (5%)
Query: 342 VSGQINCRAELEGMPDVSFPLTGLNSAHVEVLSFHPSAQVPEQGVDKQAVMFSPPLGNFV 401
+ G I+ +L GMPD+S L+ +N ++ +SFHP + ++ ++ + F PP GNF
Sbjct: 202 IQGVIDACIKLSGMPDLS--LSFMNPRLLDDVSFHPCIRF-KRWESERVLSFIPPDGNFR 258
Query: 402 LMRYQAICG--LGPPVKGFYQLSMVSEDEGAFLFKLCLMESYKAPLTMEFCNVTMLFPRR 459
L+ Y+ + PV + +S E+ F + + T+E VT+ P +
Sbjct: 259 LISYRVSSQNLVAIPVYVKHSISF-KENSSCGRFDITIGPKQNMGKTIEGITVTVHMP-K 316
Query: 460 RVVSFDGTPSIGTVS 474
V++ + TP+ G+ +
Sbjct: 317 VVLNMNLTPTQGSYT 331
>sp|Q6P856|AP2M1_XENTR AP-2 complex subunit mu OS=Xenopus tropicalis GN=ap2m1 PE=2 SV=1
Length = 435
Score = 39.7 bits (91), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 64/143 (44%), Gaps = 22/143 (15%)
Query: 294 SSELPPQDLKQPAWKPYLYKGKQRLLFT-IHETVHAAMYDRDEIPDSLSVSGQINCRAEL 352
S++ Q Q W+ K ++ LF + E+V+ M + ++ S VSG++ ++ L
Sbjct: 148 QSQITSQVTGQIGWRREGIKYRRNELFLDVLESVNLLMSPQGQVL-SAHVSGRVVMKSYL 206
Query: 353 EGMPDVSFPL-------------------TGLNSAHVEVLSFHPSAQVPEQGVDKQAVMF 393
GMP+ F + TG S ++ +FH ++ + ++ ++ F
Sbjct: 207 SGMPECKFGMNDKIVIEKQGKGTADETGKTGKQSIAIDDCTFHQCVRLSKFDSER-SISF 265
Query: 394 SPPLGNFVLMRYQAICGLGPPVK 416
PP G F LMRY+ + P +
Sbjct: 266 IPPDGEFELMRYRTTKDIILPFR 288
>sp|Q5NVF7|AP2M1_PONAB AP-2 complex subunit mu OS=Pongo abelii GN=AP2M1 PE=2 SV=1
Length = 435
Score = 39.3 bits (90), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 64/143 (44%), Gaps = 22/143 (15%)
Query: 294 SSELPPQDLKQPAWKPYLYKGKQRLLFT-IHETVHAAMYDRDEIPDSLSVSGQINCRAEL 352
S++ Q Q W+ K ++ LF + E+V+ M + ++ S VSG++ ++ L
Sbjct: 148 QSQITSQVTGQIGWRREGIKYRRNELFLDVLESVNLLMSPQGQVL-SAHVSGRVVMKSYL 206
Query: 353 EGMPDVSFPL-------------------TGLNSAHVEVLSFHPSAQVPEQGVDKQAVMF 393
GMP+ F + +G S ++ +FH ++ + ++ ++ F
Sbjct: 207 SGMPECKFGMNDKIVIEKQGKGTADETSKSGKQSIAIDDCTFHQCVRLSKSDSER-SISF 265
Query: 394 SPPLGNFVLMRYQAICGLGPPVK 416
PP G F LMRY+ + P +
Sbjct: 266 IPPDGEFELMRYRTTKDIILPFR 288
>sp|Q5ZMP6|AP2M1_CHICK AP-2 complex subunit mu OS=Gallus gallus GN=AP2M1 PE=2 SV=1
Length = 433
Score = 38.5 bits (88), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 64/143 (44%), Gaps = 22/143 (15%)
Query: 294 SSELPPQDLKQPAWKPYLYKGKQRLLFT-IHETVHAAMYDRDEIPDSLSVSGQINCRAEL 352
S++ Q Q W+ K ++ LF + E+V+ M + ++ S VSG++ ++ L
Sbjct: 146 QSQITSQVTGQIGWRREGIKYRRNELFLDVLESVNLLMSPQGQVL-SAHVSGRVVMKSYL 204
Query: 353 EGMPDVSFPL-------------------TGLNSAHVEVLSFHPSAQVPEQGVDKQAVMF 393
GMP+ F + +G S ++ +FH ++ + ++ ++ F
Sbjct: 205 SGMPECKFGMNDKIVIEKQGKGTADETGKSGKQSIAIDDCTFHQCVRLSKFDSER-SISF 263
Query: 394 SPPLGNFVLMRYQAICGLGPPVK 416
PP G F LMRY+ + P +
Sbjct: 264 IPPDGEFELMRYRTTKDIILPFR 286
>sp|Q801Q8|AP2M1_XENLA AP-2 complex subunit mu OS=Xenopus laevis GN=ap2m1 PE=2 SV=1
Length = 435
Score = 38.5 bits (88), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 64/143 (44%), Gaps = 22/143 (15%)
Query: 294 SSELPPQDLKQPAWKPYLYKGKQRLLFT-IHETVHAAMYDRDEIPDSLSVSGQINCRAEL 352
S++ Q Q W+ K ++ LF + E+V+ M + ++ S VSG++ ++ L
Sbjct: 148 QSQITSQVTGQIGWRREGIKYRRNELFLDVLESVNLLMSPQGQVL-SAHVSGRVVMKSYL 206
Query: 353 EGMPDVSFPL-------------------TGLNSAHVEVLSFHPSAQVPEQGVDKQAVMF 393
GMP+ F + TG S ++ +FH ++ + ++ ++ F
Sbjct: 207 SGMPECKFGMNDKIVIEKQGKGTADETGKTGKQSIAIDDCTFHQCVRLSKFDSER-SISF 265
Query: 394 SPPLGNFVLMRYQAICGLGPPVK 416
PP G + LMRY+ + P +
Sbjct: 266 IPPDGEYELMRYRTTKDIILPFR 288
>sp|P54672|AP2M_DICDI AP-2 complex subunit mu OS=Dictyostelium discoideum GN=apm2 PE=2
SV=2
Length = 439
Score = 38.5 bits (88), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 57/145 (39%), Gaps = 25/145 (17%)
Query: 295 SELPPQDLKQPAWK-PYLYKGKQRLLFTIHETVHAAMYDRDEIPDSLSVSGQINCRAELE 353
S++ Q W+ P + + L + E+V+ M I + VSGQ+ + L
Sbjct: 151 SKITIQATGTTPWRTPDIKYKRNELYIDVVESVNLLMSAEGNILRA-DVSGQVMMKCFLS 209
Query: 354 GMPDVSFPLTG----------------------LNSAHVEVLSFHPSAQVPEQGVDKQAV 391
GMP+ F + N ++ ++FH ++ + D+ V
Sbjct: 210 GMPECKFGMNDKVIMDREKSTNGGSAARSGARRANGIEIDDITFHQCVRLGKFDSDR-TV 268
Query: 392 MFSPPLGNFVLMRYQAICGLGPPVK 416
F PP G F LMRY+ + P K
Sbjct: 269 SFIPPDGEFELMRYRTTEHINLPFK 293
>sp|P84092|AP2M1_RAT AP-2 complex subunit mu OS=Rattus norvegicus GN=Ap2m1 PE=1 SV=1
Length = 435
Score = 38.1 bits (87), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 64/143 (44%), Gaps = 22/143 (15%)
Query: 294 SSELPPQDLKQPAWKPYLYKGKQRLLFT-IHETVHAAMYDRDEIPDSLSVSGQINCRAEL 352
S++ Q Q W+ K ++ LF + E+V+ M + ++ S VSG++ ++ L
Sbjct: 148 QSQITSQVTGQIGWRREGIKYRRNELFLDVLESVNLLMSPQGQVL-SAHVSGRVVMKSYL 206
Query: 353 EGMPDVSFPL-------------------TGLNSAHVEVLSFHPSAQVPEQGVDKQAVMF 393
GMP+ F + +G S ++ +FH ++ + ++ ++ F
Sbjct: 207 SGMPECKFGMNDKIVIEKQGKGTADETSKSGKQSIAIDDCTFHQCVRLSKFDSER-SISF 265
Query: 394 SPPLGNFVLMRYQAICGLGPPVK 416
PP G F LMRY+ + P +
Sbjct: 266 IPPDGEFELMRYRTTKDIILPFR 288
>sp|P84091|AP2M1_MOUSE AP-2 complex subunit mu OS=Mus musculus GN=Ap2m1 PE=1 SV=1
Length = 435
Score = 38.1 bits (87), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 64/143 (44%), Gaps = 22/143 (15%)
Query: 294 SSELPPQDLKQPAWKPYLYKGKQRLLFT-IHETVHAAMYDRDEIPDSLSVSGQINCRAEL 352
S++ Q Q W+ K ++ LF + E+V+ M + ++ S VSG++ ++ L
Sbjct: 148 QSQITSQVTGQIGWRREGIKYRRNELFLDVLESVNLLMSPQGQVL-SAHVSGRVVMKSYL 206
Query: 353 EGMPDVSFPL-------------------TGLNSAHVEVLSFHPSAQVPEQGVDKQAVMF 393
GMP+ F + +G S ++ +FH ++ + ++ ++ F
Sbjct: 207 SGMPECKFGMNDKIVIEKQGKGTADETSKSGKQSIAIDDCTFHQCVRLSKFDSER-SISF 265
Query: 394 SPPLGNFVLMRYQAICGLGPPVK 416
PP G F LMRY+ + P +
Sbjct: 266 IPPDGEFELMRYRTTKDIILPFR 288
>sp|Q4R706|AP2M1_MACFA AP-2 complex subunit mu OS=Macaca fascicularis GN=AP2M1 PE=2 SV=1
Length = 435
Score = 38.1 bits (87), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 64/143 (44%), Gaps = 22/143 (15%)
Query: 294 SSELPPQDLKQPAWKPYLYKGKQRLLFT-IHETVHAAMYDRDEIPDSLSVSGQINCRAEL 352
S++ Q Q W+ K ++ LF + E+V+ M + ++ S VSG++ ++ L
Sbjct: 148 QSQITSQVTGQIGWRREGIKYRRNELFLDVLESVNLLMSPQGQVL-SAHVSGRVVMKSYL 206
Query: 353 EGMPDVSFPL-------------------TGLNSAHVEVLSFHPSAQVPEQGVDKQAVMF 393
GMP+ F + +G S ++ +FH ++ + ++ ++ F
Sbjct: 207 SGMPECKFGMNDKIVIEKQGKGTADETSKSGKQSIAIDDCTFHQCVRLSKFDSER-SISF 265
Query: 394 SPPLGNFVLMRYQAICGLGPPVK 416
PP G F LMRY+ + P +
Sbjct: 266 IPPDGEFELMRYRTTKDIILPFR 288
>sp|Q96CW1|AP2M1_HUMAN AP-2 complex subunit mu OS=Homo sapiens GN=AP2M1 PE=1 SV=2
Length = 435
Score = 38.1 bits (87), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 64/143 (44%), Gaps = 22/143 (15%)
Query: 294 SSELPPQDLKQPAWKPYLYKGKQRLLFT-IHETVHAAMYDRDEIPDSLSVSGQINCRAEL 352
S++ Q Q W+ K ++ LF + E+V+ M + ++ S VSG++ ++ L
Sbjct: 148 QSQITSQVTGQIGWRREGIKYRRNELFLDVLESVNLLMSPQGQVL-SAHVSGRVVMKSYL 206
Query: 353 EGMPDVSFPL-------------------TGLNSAHVEVLSFHPSAQVPEQGVDKQAVMF 393
GMP+ F + +G S ++ +FH ++ + ++ ++ F
Sbjct: 207 SGMPECKFGMNDKIVIEKQGKGTADETSKSGKQSIAIDDCTFHQCVRLSKFDSER-SISF 265
Query: 394 SPPLGNFVLMRYQAICGLGPPVK 416
PP G F LMRY+ + P +
Sbjct: 266 IPPDGEFELMRYRTTKDIILPFR 288
>sp|Q3ZC13|AP2M1_BOVIN AP-2 complex subunit mu OS=Bos taurus GN=AP2M1 PE=1 SV=1
Length = 435
Score = 38.1 bits (87), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 64/143 (44%), Gaps = 22/143 (15%)
Query: 294 SSELPPQDLKQPAWKPYLYKGKQRLLFT-IHETVHAAMYDRDEIPDSLSVSGQINCRAEL 352
S++ Q Q W+ K ++ LF + E+V+ M + ++ S VSG++ ++ L
Sbjct: 148 QSQITSQVTGQIGWRREGIKYRRNELFLDVLESVNLLMSPQGQVL-SAHVSGRVVMKSYL 206
Query: 353 EGMPDVSFPL-------------------TGLNSAHVEVLSFHPSAQVPEQGVDKQAVMF 393
GMP+ F + +G S ++ +FH ++ + ++ ++ F
Sbjct: 207 SGMPECKFGMNDKIVIEKQGKGTADETSKSGKQSIAIDDCTFHQCVRLSKFDSER-SISF 265
Query: 394 SPPLGNFVLMRYQAICGLGPPVK 416
PP G F LMRY+ + P +
Sbjct: 266 IPPDGEFELMRYRTTKDIILPFR 288
>sp|P53678|AP3M2_RAT AP-3 complex subunit mu-2 OS=Rattus norvegicus GN=Ap3m2 PE=2 SV=1
Length = 418
Score = 38.1 bits (87), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 71/160 (44%), Gaps = 11/160 (6%)
Query: 322 IHETVHAAMYDRDEIPDSLSVSGQINCRAELEGMPDVSFPLTG--------LNSAHVEVL 373
+ T + A +D E D++ AE++G+ D LTG +N ++ +
Sbjct: 172 VKYTNNEAYFDVVEEIDAIIDKSGSTVTAEIQGVIDACVKLTGMPDLTLSFMNPRLLDDV 231
Query: 374 SFHPSAQVPEQGVDKQAVMFSPPLGNFVLMRYQAICGLGPPVKGFYQLSMVSEDEGAF-L 432
SFHP + ++ ++ + F PP GNF L+ Y + + + S+ D G+
Sbjct: 232 SFHPCVRF-KRWESERILSFIPPDGNFRLLSYHVSAQNLVAIPVYVKHSISFRDSGSLGR 290
Query: 433 FKLCLMESYKAPLTMEFCNVTMLFPRRRVVSFDGTPSIGT 472
F++ + T+E VT P + V++ TPS GT
Sbjct: 291 FEITVGPKQTMGKTIEGVTVTSQMP-KGVLNMSLTPSQGT 329
>sp|Q5ZMP7|AP3M1_CHICK AP-3 complex subunit mu-1 OS=Gallus gallus GN=AP3M1 PE=2 SV=1
Length = 418
Score = 38.1 bits (87), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 342 VSGQINCRAELEGMPDVSFPLTGLNSAHVEVLSFHPSAQVPEQGVDKQAVMFSPPLGNFV 401
+ G I+ +L GMPD+S L+ +N ++ +SFHP + ++ ++ + F PP GNF
Sbjct: 202 IQGVIDSCIKLSGMPDLS--LSFMNPRLLDDVSFHPCIRF-KRWESERVLSFIPPDGNFR 258
Query: 402 LMRYQA 407
L+ Y+
Sbjct: 259 LISYRV 264
>sp|Q6NWK2|AP2MA_DANRE AP-2 complex subunit mu-A OS=Danio rerio GN=ap2m1a PE=2 SV=1
Length = 436
Score = 37.0 bits (84), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 64/144 (44%), Gaps = 23/144 (15%)
Query: 294 SSELPPQDLKQPAWKPYLYKGKQRLLFT-IHETVHAAMYDRDEIPDSLSVSGQINCRAEL 352
S++ Q Q W+ K ++ LF + E+V+ M + ++ S VSG++ ++ L
Sbjct: 148 QSQITSQVTGQIGWRREGIKYRRNELFLDVLESVNLLMSPQGQVL-SAHVSGRVVMKSYL 206
Query: 353 EGMPDVSFPL--------------------TGLNSAHVEVLSFHPSAQVPEQGVDKQAVM 392
GMP+ F + +G S ++ +FH ++ + ++ ++
Sbjct: 207 SGMPECKFGMNDKIVIDKQGKGGTTDDAGKSGKQSIAIDDCTFHQCVRLSKFDSER-SIS 265
Query: 393 FSPPLGNFVLMRYQAICGLGPPVK 416
F PP G + LMRY+ + P +
Sbjct: 266 FIPPDGEYELMRYRTTKDIILPFR 289
>sp|Q7ZW98|AP2MB_DANRE AP-2 complex subunit mu-B OS=Danio rerio GN=ap2m1b PE=2 SV=1
Length = 436
Score = 37.0 bits (84), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 64/144 (44%), Gaps = 23/144 (15%)
Query: 294 SSELPPQDLKQPAWKPYLYKGKQRLLFT-IHETVHAAMYDRDEIPDSLSVSGQINCRAEL 352
S++ Q Q W+ K ++ LF + E+V+ M + ++ S VSG++ ++ L
Sbjct: 148 QSQITSQVTGQIGWRREGIKYRRNELFLDVLESVNLLMSPQGQVL-SAHVSGRVVMKSYL 206
Query: 353 EGMPDVSFPL--------------------TGLNSAHVEVLSFHPSAQVPEQGVDKQAVM 392
GMP+ F + +G S ++ +FH ++ + ++ ++
Sbjct: 207 SGMPECKFGMNDKIVIDKQGKGGTTDDTGKSGKQSIAIDDCTFHQCVRLSKFDSER-SIS 265
Query: 393 FSPPLGNFVLMRYQAICGLGPPVK 416
F PP G + LMRY+ + P +
Sbjct: 266 FIPPDGEYELMRYRTTKDIILPFR 289
>sp|Q3SYW1|AP1M2_BOVIN AP-1 complex subunit mu-2 OS=Bos taurus GN=AP1M2 PE=1 SV=3
Length = 423
Score = 36.2 bits (82), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 59/133 (44%), Gaps = 14/133 (10%)
Query: 295 SELPPQDLKQPAWKPYLYKGKQRLLFT-IHETVHAAMYDRDEIPDSLSVSGQINCRAELE 353
S +PP +W+ K K+ +F + E+V+ + + S + G I + L
Sbjct: 147 SRVPPTVTNAVSWRSEGIKYKKNEVFIDVIESVNLLVNANGSVLLS-EIVGSIKLKVFLS 205
Query: 354 GMPD--------VSFPLTGLN---SAHVEVLSFHPSAQVPEQGVDKQAVMFSPPLGNFVL 402
GMP+ V F LTG + S +E + FH ++ D+ + F PP G+F L
Sbjct: 206 GMPELRLGLNDRVLFELTGRSKNKSVELEDVKFHQCVRLSRFDNDR-TISFIPPDGDFEL 264
Query: 403 MRYQAICGLGPPV 415
M Y+ + P +
Sbjct: 265 MSYRLSTQVKPLI 277
>sp|Q9Y6Q5|AP1M2_HUMAN AP-1 complex subunit mu-2 OS=Homo sapiens GN=AP1M2 PE=1 SV=4
Length = 423
Score = 36.2 bits (82), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 59/133 (44%), Gaps = 14/133 (10%)
Query: 295 SELPPQDLKQPAWKPYLYKGKQRLLFT-IHETVHAAMYDRDEIPDSLSVSGQINCRAELE 353
S +PP +W+ K K+ +F + E+V+ + + S + G I + L
Sbjct: 147 SRVPPTVTNAVSWRSEGIKYKKNEVFIDVIESVNLLVNANGSVLLS-EIVGTIKLKVFLS 205
Query: 354 GMPD--------VSFPLTGLN---SAHVEVLSFHPSAQVPEQGVDKQAVMFSPPLGNFVL 402
GMP+ V F LTG + S +E + FH ++ D+ + F PP G+F L
Sbjct: 206 GMPELRLGLNDRVLFELTGRSKNKSVELEDVKFHQCVRLSRFDNDR-TISFIPPDGDFEL 264
Query: 403 MRYQAICGLGPPV 415
M Y+ + P +
Sbjct: 265 MSYRLSTQVKPLI 277
>sp|Q9WVP1|AP1M2_MOUSE AP-1 complex subunit mu-2 OS=Mus musculus GN=Ap1m2 PE=1 SV=3
Length = 423
Score = 36.2 bits (82), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 59/133 (44%), Gaps = 14/133 (10%)
Query: 295 SELPPQDLKQPAWKPYLYKGKQRLLFT-IHETVHAAMYDRDEIPDSLSVSGQINCRAELE 353
S +PP +W+ K K+ +F + E+V+ + + S + G I + L
Sbjct: 147 SRVPPTVTNAVSWRSEGIKYKKNEVFIDVIESVNLLVNANGSVLLS-EIVGTIKLKVFLS 205
Query: 354 GMPD--------VSFPLTGLN---SAHVEVLSFHPSAQVPEQGVDKQAVMFSPPLGNFVL 402
GMP+ V F LTG + S +E + FH ++ D+ + F PP G+F L
Sbjct: 206 GMPELRLGLNDRVLFELTGRSKNKSVELEDVKFHQCVRLSRFDNDR-TISFIPPDGDFEL 264
Query: 403 MRYQAICGLGPPV 415
M Y+ + P +
Sbjct: 265 MSYRLSTQVKPLI 277
>sp|A6R8Q8|ARO1_AJECN Pentafunctional AROM polypeptide OS=Ajellomyces capsulata (strain
NAm1 / WU24) GN=HCAG_06699 PE=3 SV=1
Length = 1538
Score = 34.7 bits (78), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 233 ASTAPSGAAAVGTVASDAPKLGSRPLEKDALRSFISSAMPFGTPVDLSYSNIFAIKVNGF 292
++T P AAA+ + P +GS+ L+ DA R + P G VD N F+ +V G
Sbjct: 646 SATYPLAAAAITGTSCTVPNIGSKSLQGDA-RFAVDVLRPMGCAVD---QNDFSTRVTGP 701
Query: 293 PSSELPP 299
P L P
Sbjct: 702 PGGILSP 708
>sp|P53677|AP3M2_HUMAN AP-3 complex subunit mu-2 OS=Homo sapiens GN=AP3M2 PE=1 SV=1
Length = 418
Score = 34.7 bits (78), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 70/160 (43%), Gaps = 11/160 (6%)
Query: 322 IHETVHAAMYDRDEIPDSLSVSGQINCRAELEGMPDVSFPLTG--------LNSAHVEVL 373
+ T + A +D E D++ AE++G+ D LTG +N ++ +
Sbjct: 172 VKYTNNEAYFDVIEEIDAIIDKSGSTITAEIQGVIDACVKLTGMPDLTLSFMNPRLLDDV 231
Query: 374 SFHPSAQVPEQGVDKQAVMFSPPLGNFVLMRYQAICGLGPPVKGFYQLSMVSEDEGAF-L 432
SFHP + ++ ++ + F PP GNF L+ Y + + + ++ D +
Sbjct: 232 SFHPCVRF-KRWESERILSFIPPDGNFRLLSYHVSAQNLVAIPVYVKHNISFRDSSSLGR 290
Query: 433 FKLCLMESYKAPLTMEFCNVTMLFPRRRVVSFDGTPSIGT 472
F++ + T+E VT P + V++ TPS GT
Sbjct: 291 FEITVGPKQTMGKTIEGVTVTSQMP-KGVLNMSLTPSQGT 329
>sp|Q8R2R9|AP3M2_MOUSE AP-3 complex subunit mu-2 OS=Mus musculus GN=Ap3m2 PE=2 SV=1
Length = 418
Score = 34.3 bits (77), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 70/160 (43%), Gaps = 11/160 (6%)
Query: 322 IHETVHAAMYDRDEIPDSLSVSGQINCRAELEGMPDVSFPLTG--------LNSAHVEVL 373
+ T + A +D E D++ AE++G+ D LTG +N ++ +
Sbjct: 172 VKYTNNEAYFDVVEEIDAIIDKSGSTVTAEIQGVIDACVKLTGMPDLTLSFMNPRLLDDV 231
Query: 374 SFHPSAQVPEQGVDKQAVMFSPPLGNFVLMRYQAICGLGPPVKGFYQLSMVSEDEGAF-L 432
SFHP + ++ ++ + F PP GNF L+ Y + + + S+ D +
Sbjct: 232 SFHPCVRF-KRWESERILSFIPPDGNFRLLAYHVSAQNLVAIPVYVKHSISFRDSSSLGR 290
Query: 433 FKLCLMESYKAPLTMEFCNVTMLFPRRRVVSFDGTPSIGT 472
F++ + T+E VT P + V++ TPS GT
Sbjct: 291 FEITVGPKQTMGKTIEGVIVTSQMP-KGVLNMSLTPSQGT 329
>sp|B8G1G3|GLGA_DESHD Glycogen synthase OS=Desulfitobacterium hafniense (strain DCB-2 /
DSM 10664) GN=glgA PE=3 SV=1
Length = 467
Score = 33.1 bits (74), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%)
Query: 317 RLLFTIHETVHAAMYDRDEIPDSLSVSGQINCRAELEGMPDVSFPLTGL 365
+ LFTIH + ++ R+ D L +SG+++ A+LE V+F G+
Sbjct: 158 KTLFTIHNLKYQGIFPREVREDVLGLSGELSSSAQLEFYGGVNFMKAGI 206
>sp|C0NL63|ARO1_AJECG Pentafunctional AROM polypeptide OS=Ajellomyces capsulata (strain
G186AR / H82 / ATCC MYA-2454 / RMSCC 2432) GN=HCBG_03893
PE=3 SV=1
Length = 1595
Score = 32.7 bits (73), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 233 ASTAPSGAAAVGTVASDAPKLGSRPLEKDALRSFISSAMPFGTPVDLSYSNIFAIKVNGF 292
++T P AAA+ + P +GS+ L+ DA R + P G VD S F+ +V G
Sbjct: 646 SATYPLAAAAITGTSCTVPNIGSKSLQGDA-RFAVDVLRPMGCAVDQSD---FSTRVTGP 701
Query: 293 PSSELPP 299
P L P
Sbjct: 702 PGGILSP 708
>sp|C6HCG7|ARO1_AJECH Pentafunctional AROM polypeptide OS=Ajellomyces capsulata (strain
H143) GN=HCDG_03716 PE=3 SV=1
Length = 1595
Score = 32.7 bits (73), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 233 ASTAPSGAAAVGTVASDAPKLGSRPLEKDALRSFISSAMPFGTPVDLSYSNIFAIKVNGF 292
++T P AAA+ + P +GS+ L+ DA R + P G VD S F+ +V G
Sbjct: 646 SATYPLAAAAITGTSCTVPNIGSKSLQGDA-RFAVDVLRPMGCAVDQSD---FSTRVTGP 701
Query: 293 PSSELPP 299
P L P
Sbjct: 702 PGGILSP 708
>sp|Q46817|YGFQ_ECOLI Putative permease YgfQ OS=Escherichia coli (strain K12) GN=ygfQ
PE=3 SV=2
Length = 455
Score = 32.7 bits (73), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 45/100 (45%), Gaps = 8/100 (8%)
Query: 422 SMVSEDEGAFLFKLCLMESYKAPLTMEFCNVTMLFPRRRVVSFDGTPSIGTVSNNEHSVE 481
S+ ED + +F L +M + + + + M FD T +I V+ + ++
Sbjct: 240 SLTGEDGKSLIFSLDIMGALQPTVLPSVLALVM------TAVFDATGTIRAVAGQANLLD 293
Query: 482 W--KIMTSGRALTGRSLEATFPGTVKFAPWQTQRSSSGGT 519
+I+ G+ALT S+ + F G V AP S+ GT
Sbjct: 294 KDNQIINGGKALTSDSVSSIFSGLVGAAPAAVYIESAAGT 333
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.134 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 241,688,530
Number of Sequences: 539616
Number of extensions: 10650616
Number of successful extensions: 25949
Number of sequences better than 100.0: 48
Number of HSP's better than 100.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 41
Number of HSP's that attempted gapping in prelim test: 25888
Number of HSP's gapped (non-prelim): 76
length of query: 625
length of database: 191,569,459
effective HSP length: 124
effective length of query: 501
effective length of database: 124,657,075
effective search space: 62453194575
effective search space used: 62453194575
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)