BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006938
(625 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4DSY|A Chain A, Crystal Structure Of Red Kidney Bean Purple Acid
Phosphatase In Complex With Maybridge Fragment Cc24201
pdb|4DSY|B Chain B, Crystal Structure Of Red Kidney Bean Purple Acid
Phosphatase In Complex With Maybridge Fragment Cc24201
pdb|4DSY|C Chain C, Crystal Structure Of Red Kidney Bean Purple Acid
Phosphatase In Complex With Maybridge Fragment Cc24201
pdb|4DSY|D Chain D, Crystal Structure Of Red Kidney Bean Purple Acid
Phosphatase In Complex With Maybridge Fragment Cc24201
pdb|4DT2|A Chain A, Crystal Structure Of Red Kidney Bean Purple Acid
Phosphatase In Complex With Maybridge Fragment Cc27209
pdb|4DT2|B Chain B, Crystal Structure Of Red Kidney Bean Purple Acid
Phosphatase In Complex With Maybridge Fragment Cc27209
pdb|4DT2|C Chain C, Crystal Structure Of Red Kidney Bean Purple Acid
Phosphatase In Complex With Maybridge Fragment Cc27209
pdb|4DT2|D Chain D, Crystal Structure Of Red Kidney Bean Purple Acid
Phosphatase In Complex With Maybridge Fragment Cc27209
pdb|4DHL|A Chain A, Crystal Structure Of Red Kidney Bean Purple Acid
Phosphatase In Complex With Maybridge Fragment Mo07123
pdb|4DHL|B Chain B, Crystal Structure Of Red Kidney Bean Purple Acid
Phosphatase In Complex With Maybridge Fragment Mo07123
pdb|4DHL|D Chain D, Crystal Structure Of Red Kidney Bean Purple Acid
Phosphatase In Complex With Maybridge Fragment Mo07123
pdb|4DHL|C Chain C, Crystal Structure Of Red Kidney Bean Purple Acid
Phosphatase In Complex With Maybridge Fragment Mo07123
Length = 426
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 96/375 (25%), Positives = 160/375 (42%), Gaps = 61/375 (16%)
Query: 169 GWIFDAVIKGLKKGVRYYYKVGSDSKGWSETHSFVSRNE---DSNETIAFLFGDMGAATP 225
G+I I+ LK +YYY+VG + + SF++ + D T L GD+G +
Sbjct: 79 GFIHHTTIRKLKYNTKYYYEVGL--RNTTRRFSFITPPQTGLDVPYTFG-LIGDLGQSFD 135
Query: 226 YTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGY----SWLWDEFFALIE 281
T L E K V +GD+SYA Y + WD + E
Sbjct: 136 SNT--------------TLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRFTE 181
Query: 282 PVASRVAYHVCIGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKFHMPGNSLEPTG 341
+ + GNHE ++ P+ + T E P+S ++H+P E +
Sbjct: 182 RSVAYQPWIWTAGNHEIEF-----APEINET--------EPFKPFSYRYHVP---YEASQ 225
Query: 342 TRAPATRNLYYSFDMGVVHFVYISTETNFLQGSNQYNFIKHDLESVDRKKTPFVVVQGHR 401
+ +P +YS H + +S+ + + +G+ QY ++K +L V R +TP+++V H
Sbjct: 226 STSP----FWYSIKRASAHIIVLSSYSAYGRGTPQYTWLKKELRKVKRSETPWLIVLMHS 281
Query: 402 PMYTTSNEN--RDAPLRNRMLEHLEPLFVENNVTLALWGHVHRYERFCPLNNFTCGSMGM 459
P+Y + N + +R + E FV+ V + GHVH YER ++N
Sbjct: 282 PLYNSYNHHFMEGEAMRTK----FEAWFVKYKVDVVFAGHVHAYERSERVSNIAYKITNG 337
Query: 460 DGEP--SEAFPVHIVIGMAGQDWQPIWQPRPDHPDDPVFPQPMRSLYRGGEFGYTRL-VA 516
P ++ PV+I IG AG ++ I + + PQP S +R FG+ +
Sbjct: 338 LCTPVKDQSAPVYITIGDAG-NYGVI-------DSNMIQPQPEYSAFREASFGHGMFDIK 389
Query: 517 TKEKLTLSYVGNHDG 531
+ S+ N DG
Sbjct: 390 NRTHAHFSWNRNQDG 404
>pdb|2QFP|A Chain A, Crystal Structure Of Red Kidney Bean Purple Acid
Phosphatase In Complex With Fluoride
pdb|2QFP|B Chain B, Crystal Structure Of Red Kidney Bean Purple Acid
Phosphatase In Complex With Fluoride
pdb|2QFP|C Chain C, Crystal Structure Of Red Kidney Bean Purple Acid
Phosphatase In Complex With Fluoride
pdb|2QFP|D Chain D, Crystal Structure Of Red Kidney Bean Purple Acid
Phosphatase In Complex With Fluoride
pdb|2QFR|A Chain A, Crystal Structure Of Red Kidney Bean Purple Acid
Phosphatase With Bound Sulfate
pdb|2QFR|B Chain B, Crystal Structure Of Red Kidney Bean Purple Acid
Phosphatase With Bound Sulfate
Length = 424
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 96/375 (25%), Positives = 160/375 (42%), Gaps = 61/375 (16%)
Query: 169 GWIFDAVIKGLKKGVRYYYKVGSDSKGWSETHSFVSRNE---DSNETIAFLFGDMGAATP 225
G+I I+ LK +YYY+VG + + SF++ + D T L GD+G +
Sbjct: 77 GFIHHTTIRKLKYNTKYYYEVGL--RNTTRRFSFITPPQTGLDVPYTFG-LIGDLGQSFD 133
Query: 226 YTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGY----SWLWDEFFALIE 281
T L E K V +GD+SYA Y + WD + E
Sbjct: 134 SNT--------------TLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRFTE 179
Query: 282 PVASRVAYHVCIGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKFHMPGNSLEPTG 341
+ + GNHE ++ P+ + T E P+S ++H+P E +
Sbjct: 180 RSVAYQPWIWTAGNHEIEF-----APEINET--------EPFKPFSYRYHVP---YEASQ 223
Query: 342 TRAPATRNLYYSFDMGVVHFVYISTETNFLQGSNQYNFIKHDLESVDRKKTPFVVVQGHR 401
+ +P +YS H + +S+ + + +G+ QY ++K +L V R +TP+++V H
Sbjct: 224 STSP----FWYSIKRASAHIIVLSSYSAYGRGTPQYTWLKKELRKVKRSETPWLIVLMHS 279
Query: 402 PMYTTSNEN--RDAPLRNRMLEHLEPLFVENNVTLALWGHVHRYERFCPLNNFTCGSMGM 459
P+Y + N + +R + E FV+ V + GHVH YER ++N
Sbjct: 280 PLYNSYNHHFMEGEAMRTK----FEAWFVKYKVDVVFAGHVHAYERSERVSNIAYKITNG 335
Query: 460 DGEP--SEAFPVHIVIGMAGQDWQPIWQPRPDHPDDPVFPQPMRSLYRGGEFGYTRL-VA 516
P ++ PV+I IG AG ++ I + + PQP S +R FG+ +
Sbjct: 336 LCTPVKDQSAPVYITIGDAG-NYGVI-------DSNMIQPQPEYSAFREASFGHGMFDIK 387
Query: 517 TKEKLTLSYVGNHDG 531
+ S+ N DG
Sbjct: 388 NRTHAHFSWNRNQDG 402
>pdb|1KBP|A Chain A, Kidney Bean Purple Acid Phosphatase
pdb|1KBP|B Chain B, Kidney Bean Purple Acid Phosphatase
pdb|1KBP|C Chain C, Kidney Bean Purple Acid Phosphatase
pdb|1KBP|D Chain D, Kidney Bean Purple Acid Phosphatase
pdb|3KBP|A Chain A, Kidney Bean Purple Acid Phosphatase
pdb|3KBP|B Chain B, Kidney Bean Purple Acid Phosphatase
pdb|3KBP|C Chain C, Kidney Bean Purple Acid Phosphatase
pdb|3KBP|D Chain D, Kidney Bean Purple Acid Phosphatase
pdb|4KBP|A Chain A, Kidney Bean Purple Acid Phosphatase
pdb|4KBP|B Chain B, Kidney Bean Purple Acid Phosphatase
pdb|4KBP|C Chain C, Kidney Bean Purple Acid Phosphatase
pdb|4KBP|D Chain D, Kidney Bean Purple Acid Phosphatase
Length = 432
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 96/375 (25%), Positives = 160/375 (42%), Gaps = 61/375 (16%)
Query: 169 GWIFDAVIKGLKKGVRYYYKVGSDSKGWSETHSFVSRNE---DSNETIAFLFGDMGAATP 225
G+I I+ LK +YYY+VG + + SF++ + D T L GD+G +
Sbjct: 85 GFIHHTTIRKLKYNTKYYYEVGL--RNTTRRFSFITPPQTGLDVPYTFG-LIGDLGQSFD 141
Query: 226 YTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGY----SWLWDEFFALIE 281
T L E K V +GD+SYA Y + WD + E
Sbjct: 142 SNT--------------TLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRFTE 187
Query: 282 PVASRVAYHVCIGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKFHMPGNSLEPTG 341
+ + GNHE ++ P+ + T E P+S ++H+P E +
Sbjct: 188 RSVAYQPWIWTAGNHEIEF-----APEINET--------EPFKPFSYRYHVP---YEASQ 231
Query: 342 TRAPATRNLYYSFDMGVVHFVYISTETNFLQGSNQYNFIKHDLESVDRKKTPFVVVQGHR 401
+ +P +YS H + +S+ + + +G+ QY ++K +L V R +TP+++V H
Sbjct: 232 STSP----FWYSIKRASAHIIVLSSYSAYGRGTPQYTWLKKELRKVKRSETPWLIVLMHS 287
Query: 402 PMYTTSNEN--RDAPLRNRMLEHLEPLFVENNVTLALWGHVHRYERFCPLNNFTCGSMGM 459
P+Y + N + +R + E FV+ V + GHVH YER ++N
Sbjct: 288 PLYNSYNHHFMEGEAMRTK----FEAWFVKYKVDVVFAGHVHAYERSERVSNIAYKITDG 343
Query: 460 DGEP--SEAFPVHIVIGMAGQDWQPIWQPRPDHPDDPVFPQPMRSLYRGGEFGYTRL-VA 516
P ++ PV+I IG AG ++ I + + PQP S +R FG+ +
Sbjct: 344 LCTPVKDQSAPVYITIGDAG-NYGVI-------DSNMIQPQPEYSAFREASFGHGMFDIK 395
Query: 517 TKEKLTLSYVGNHDG 531
+ S+ N DG
Sbjct: 396 NRTHAHFSWNRNQDG 410
>pdb|1XZW|A Chain A, Sweet Potato Purple Acid PhosphatasePHOSPHATE COMPLEX
pdb|1XZW|B Chain B, Sweet Potato Purple Acid PhosphatasePHOSPHATE COMPLEX
Length = 426
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 93/371 (25%), Positives = 156/371 (42%), Gaps = 53/371 (14%)
Query: 169 GWIFDAVIKGLKKGVRYYYKVG-SDSKGWSETHSFVSRNEDSNETIAFLFGDMGAATPYT 227
+I IK L+ +YYY++G D+K FV+ + + + ++FG +G
Sbjct: 84 AFIHHCTIKDLEYDTKYYYRLGFGDAK---RQFWFVTPPKPGPD-VPYVFGLIG------ 133
Query: 228 TFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGY----SWLWDEFFALIEPV 283
+T D + + L E K V +GD+SY+ + + WD + E
Sbjct: 134 DIGQTHDSNTT-----LTHYEQNSAKGQAVLFMGDLSYSNRWPNHDNNRWDTWGRFSERS 188
Query: 284 ASRVAYHVCIGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKFHMPGNSLEPTGTR 343
+ + GNHE D+ PD G + VP++ ++ P E +G+
Sbjct: 189 VAYQPWIWTAGNHEIDY-----APD--------IGEYQPFVPFTNRYPTPH---EASGSG 232
Query: 344 APATRNLYYSFDMGVVHFVYISTETNFLQGSNQYNFIKHDLESVDRKKTPFVVVQGHRPM 403
P L+Y+ H + +S+ + F++ S QY + +LE V+R +TP+++V H P+
Sbjct: 233 DP----LWYAIKRASAHIIVLSSYSGFVKYSPQYKWFTSELEKVNRSETPWLIVLVHAPL 288
Query: 404 YTTSNENRDAPLRNRMLEHLEPLFVENNVTLALWGHVHRYERFCPLNNFTCGSMGMDGEP 463
Y + + R + EP FV V + GHVH YER ++N + P
Sbjct: 289 YNSYEAHYMEGEAMRAI--FEPYFVYYKVDIVFSGHVHSYERSERVSNVAYNIVNAKCTP 346
Query: 464 --SEAFPVHIVIGMAGQDWQPIWQPRPDHPDDPVFPQPMRSLYRGGEFGYTRL-VATKEK 520
E+ PV+I IG G + PQP S +R FG+ + +
Sbjct: 347 VSDESAPVYITIGDGGNS--------EGLASEMTQPQPSYSAFREASFGHGIFDIKNRTH 398
Query: 521 LTLSYVGNHDG 531
S+ N DG
Sbjct: 399 AHFSWHRNQDG 409
>pdb|1UTE|A Chain A, Pig Purple Acid Phosphatase Complexed With Phosphate
Length = 313
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 97/261 (37%), Gaps = 37/261 (14%)
Query: 218 GDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFF 277
GD G P F ++ ++ K I ++ LG F+ +GD Y G D+ F
Sbjct: 13 GDWGG-VPNAPFHTARE--MANAKAIATTVKTLGAD--FILSLGDNFYFTGVHDAKDKRF 67
Query: 278 ------ALIEPVASRVAYHVCIGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVP---YSL 328
+P V +HV GNH++ + S + + P Y L
Sbjct: 68 QETFEDVFSDPSLRNVPWHVLAGNHDH-------LGNVSAQIAYSKISKRWNFPSPYYRL 120
Query: 329 KFHMPGNSLEPTGTRAPATRNLYYSFDMGVVHFVYISTET--NFLQGSNQYNFIKHDLES 386
+F +P +++ T L + D FV E N Q +IK L +
Sbjct: 121 RFKIPRSNVS-VAIFMLDTVTLCGNSD----DFVSQQPERPRNLALARTQLAWIKKQLAA 175
Query: 387 VDRKKTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVENNVTLALWGHVHRYERF 446
K +V+V GH P+++ + L ++L PL + VT L GH H +
Sbjct: 176 A---KEDYVLVAGHYPVWSIAEHGPTHCLVKQLL----PLLTTHKVTAYLCGHDHNLQYL 228
Query: 447 CPLN--NFTCGSMGMDGEPSE 465
N F G +PS+
Sbjct: 229 QDENGLGFVLSGAGNFMDPSK 249
>pdb|1BIH|A Chain A, Crystal Structure Of The Insect Immune Protein Hemolin: A
New Domain Arrangement With Implications For Homophilic
Adhesion
pdb|1BIH|B Chain B, Crystal Structure Of The Insect Immune Protein Hemolin: A
New Domain Arrangement With Implications For Homophilic
Adhesion
Length = 395
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 55/151 (36%), Gaps = 25/151 (16%)
Query: 156 DKPANSSIGWRDPGWIFDAVIKGLKKGVRYYYKVGSDSKGWSETHSFVSRNEDSNETIAF 215
D+PA +P + + +I+G +GV+Y +K S W E ++ + ++E S + F
Sbjct: 11 DQPAEVLFRENNP-TVLECIIEGNDQGVKYSWKKDGKSYNWQEHNAALRKDEGS---LVF 66
Query: 216 LFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDE 275
L Y F T PA V+ IS+ + Y
Sbjct: 67 LRPQASDEGHYQCFAET---------------------PAGVASSRVISFRKTYLIASPA 105
Query: 276 FFALIEPVASRVAYHVCIGNHEYDWPLQPWK 306
P+ R C+ + Y PL WK
Sbjct: 106 KTHEKTPIEGRPFQLDCVLPNAYPKPLITWK 136
>pdb|1QHW|A Chain A, Purple Acid Phosphatase From Rat Bone
Length = 327
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 7/69 (10%)
Query: 376 QYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVENNVTLA 435
Q +++K L + K +V+V GH P+++ + P R ++++L PL VT
Sbjct: 186 QLSWLKKQLAAA---KEDYVLVAGHYPIWSIAEH---GPTRC-LVKNLRPLLAAYGVTAY 238
Query: 436 LWGHVHRYE 444
L GH H +
Sbjct: 239 LCGHDHNLQ 247
>pdb|1QFC|A Chain A, Structure Of Rat Purple Acid Phosphatase
Length = 306
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 7/69 (10%)
Query: 376 QYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVENNVTLA 435
Q +++K L + K +V+V GH P+++ + P R ++++L PL VT
Sbjct: 165 QLSWLKKQLAAA---KEDYVLVAGHYPIWSIAEH---GPTRC-LVKNLRPLLAAYGVTAY 217
Query: 436 LWGHVHRYE 444
L GH H +
Sbjct: 218 LCGHDHNLQ 226
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.136 0.433
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,230,994
Number of Sequences: 62578
Number of extensions: 847549
Number of successful extensions: 1690
Number of sequences better than 100.0: 18
Number of HSP's better than 100.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1669
Number of HSP's gapped (non-prelim): 20
length of query: 625
length of database: 14,973,337
effective HSP length: 105
effective length of query: 520
effective length of database: 8,402,647
effective search space: 4369376440
effective search space used: 4369376440
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.4 bits)