Query 006938
Match_columns 625
No_of_seqs 372 out of 2866
Neff 7.3
Searched_HMMs 46136
Date Thu Mar 28 16:38:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006938.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/006938hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1378 Purple acid phosphatas 100.0 1.6E-69 3.6E-74 571.6 40.0 390 97-544 41-440 (452)
2 PLN02533 probable purple acid 100.0 9.5E-68 2.1E-72 575.7 46.9 379 96-543 39-420 (427)
3 cd00839 MPP_PAPs purple acid p 100.0 3.1E-44 6.7E-49 374.6 32.6 286 210-541 3-294 (294)
4 PTZ00422 glideosome-associated 100.0 6.7E-34 1.5E-38 301.3 29.5 287 202-549 17-337 (394)
5 cd07378 MPP_ACP5 Homo sapiens 100.0 1.2E-30 2.6E-35 270.1 25.8 251 212-531 1-277 (277)
6 cd07395 MPP_CSTP1 Homo sapiens 100.0 3.7E-27 8.1E-32 242.3 23.7 244 210-527 3-261 (262)
7 KOG2679 Purple (tartrate-resis 99.9 1E-25 2.2E-30 221.5 18.1 272 200-541 32-329 (336)
8 PF09423 PhoD: PhoD-like phosp 99.9 9.9E-23 2.1E-27 225.5 27.8 367 106-525 3-453 (453)
9 COG3540 PhoD Phosphodiesterase 99.9 9.4E-23 2E-27 214.9 14.6 301 99-444 35-419 (522)
10 cd07402 MPP_GpdQ Enterobacter 99.9 1.5E-21 3.4E-26 197.5 20.4 209 213-480 1-214 (240)
11 cd07396 MPP_Nbla03831 Homo sap 99.9 3E-21 6.5E-26 199.1 22.6 209 212-478 1-246 (267)
12 PRK11148 cyclic 3',5'-adenosin 99.8 2.7E-19 5.8E-24 185.4 24.1 250 202-527 5-260 (275)
13 cd07399 MPP_YvnB Bacillus subt 99.8 1.6E-18 3.6E-23 173.0 20.9 161 212-448 1-166 (214)
14 cd07401 MPP_TMEM62_N Homo sapi 99.8 9.3E-19 2E-23 179.5 19.6 193 214-450 2-217 (256)
15 cd00842 MPP_ASMase acid sphing 99.8 2.5E-18 5.4E-23 179.9 15.1 201 215-447 41-265 (296)
16 cd08163 MPP_Cdc1 Saccharomyces 99.7 2.4E-16 5.3E-21 161.3 16.5 162 252-446 44-231 (257)
17 PF00149 Metallophos: Calcineu 99.6 1.2E-15 2.6E-20 142.1 9.0 198 212-443 1-200 (200)
18 cd07393 MPP_DR1119 Deinococcus 99.6 6.1E-14 1.3E-18 141.8 19.0 207 214-476 1-226 (232)
19 TIGR03767 P_acnes_RR metalloph 99.6 3E-14 6.6E-19 154.0 16.4 96 348-446 290-395 (496)
20 cd07383 MPP_Dcr2 Saccharomyces 99.5 3.2E-13 6.9E-18 133.3 15.3 164 211-447 2-180 (199)
21 TIGR03768 RPA4764 metallophosp 99.4 6.6E-12 1.4E-16 134.7 17.4 96 348-444 291-412 (492)
22 cd07392 MPP_PAE1087 Pyrobaculu 99.4 8.1E-12 1.8E-16 121.1 15.8 148 251-444 21-174 (188)
23 TIGR03729 acc_ester putative p 99.4 6.5E-12 1.4E-16 127.5 15.5 185 213-444 1-222 (239)
24 COG1409 Icc Predicted phosphoh 99.4 1.2E-11 2.7E-16 128.1 16.6 186 212-443 1-193 (301)
25 cd07385 MPP_YkuE_C Bacillus su 99.3 1.2E-11 2.5E-16 123.8 14.1 173 212-451 2-174 (223)
26 cd07400 MPP_YydB Bacillus subt 99.3 1.9E-11 4.2E-16 113.8 12.9 127 214-446 1-128 (144)
27 cd07388 MPP_Tt1561 Thermus the 99.3 1.7E-10 3.7E-15 115.6 19.5 174 212-441 5-189 (224)
28 cd00840 MPP_Mre11_N Mre11 nucl 99.3 8.1E-11 1.8E-15 117.3 14.8 200 213-446 1-204 (223)
29 PRK11340 phosphodiesterase Yae 99.2 3.5E-10 7.6E-15 117.1 17.8 82 206-299 44-125 (271)
30 cd07404 MPP_MS158 Microscilla 99.2 8.8E-11 1.9E-15 112.3 10.7 126 251-445 24-151 (166)
31 KOG1432 Predicted DNA repair e 99.2 2E-09 4.4E-14 110.6 21.0 90 209-300 51-148 (379)
32 PF14008 Metallophos_C: Iron/z 99.2 4.2E-11 9.1E-16 95.6 6.5 61 466-537 1-62 (62)
33 PF12850 Metallophos_2: Calcin 98.9 2.3E-08 4.9E-13 93.8 15.1 59 213-299 2-60 (156)
34 cd00838 MPP_superfamily metall 98.9 1.4E-08 3E-13 91.0 11.3 46 251-297 24-69 (131)
35 cd00841 MPP_YfcE Escherichia c 98.8 4.2E-08 9.2E-13 92.5 11.9 59 213-299 1-59 (155)
36 KOG3770 Acid sphingomyelinase 98.8 5.6E-08 1.2E-12 107.0 13.2 191 237-445 194-406 (577)
37 cd08166 MPP_Cdc1_like_1 unchar 98.8 5.2E-08 1.1E-12 95.2 10.7 49 252-300 41-94 (195)
38 PRK05340 UDP-2,3-diacylglucosa 98.7 6.8E-08 1.5E-12 98.3 11.6 77 213-299 2-83 (241)
39 cd07384 MPP_Cdc1_like Saccharo 98.7 5E-08 1.1E-12 94.1 9.9 49 251-299 43-100 (171)
40 cd07394 MPP_Vps29 Homo sapiens 98.7 2.8E-06 6.1E-11 82.5 21.0 74 423-533 98-171 (178)
41 COG1408 Predicted phosphohydro 98.7 1.8E-07 3.9E-12 97.2 13.1 78 209-300 42-119 (284)
42 cd07397 MPP_DevT Myxococcus xa 98.6 1.5E-06 3.3E-11 87.6 16.3 64 212-300 1-64 (238)
43 cd07379 MPP_239FB Homo sapiens 98.6 6E-07 1.3E-11 82.9 11.5 48 395-444 70-117 (135)
44 cd08165 MPP_MPPE1 human MPPE1 98.6 3.2E-07 7E-12 87.1 9.8 48 252-299 37-89 (156)
45 TIGR01854 lipid_A_lpxH UDP-2,3 98.6 2.6E-06 5.7E-11 86.1 17.0 75 215-299 2-81 (231)
46 cd07389 MPP_PhoD Bacillus subt 98.6 2.3E-07 5E-12 93.3 9.1 147 251-446 27-207 (228)
47 cd08164 MPP_Ted1 Saccharomyces 98.5 4.8E-07 1E-11 88.3 10.6 61 239-300 31-112 (193)
48 PF14582 Metallophos_3: Metall 98.5 1.1E-06 2.4E-11 86.3 12.6 177 213-444 7-219 (255)
49 COG1768 Predicted phosphohydro 98.5 3.8E-06 8.3E-11 79.3 14.7 69 390-480 156-224 (230)
50 TIGR00040 yfcE phosphoesterase 98.5 3.6E-06 7.8E-11 79.9 15.0 62 213-298 2-63 (158)
51 COG2129 Predicted phosphoester 98.5 1E-05 2.3E-10 79.7 17.6 176 211-444 3-188 (226)
52 PRK09453 phosphodiesterase; Pr 98.4 1.8E-05 4E-10 76.9 18.3 70 213-299 2-76 (182)
53 TIGR00583 mre11 DNA repair pro 98.4 2.8E-05 6.1E-10 84.7 20.5 87 210-299 2-123 (405)
54 cd07398 MPP_YbbF-LpxH Escheric 98.3 6.6E-06 1.4E-10 81.8 11.3 48 252-299 29-82 (217)
55 cd07410 MPP_CpdB_N Escherichia 98.2 3.9E-05 8.5E-10 79.7 17.0 59 377-444 172-231 (277)
56 cd07403 MPP_TTHA0053 Thermus t 98.2 5.6E-06 1.2E-10 76.0 9.4 26 421-446 81-106 (129)
57 cd00845 MPP_UshA_N_like Escher 98.2 2.5E-05 5.4E-10 79.7 15.0 82 212-300 1-83 (252)
58 cd07406 MPP_CG11883_N Drosophi 98.1 4.1E-05 8.9E-10 78.7 14.1 191 213-444 2-208 (257)
59 cd00844 MPP_Dbr1_N Dbr1 RNA la 98.1 8.8E-05 1.9E-09 76.4 16.1 55 395-449 167-235 (262)
60 cd07412 MPP_YhcR_N Bacillus su 98.1 0.00018 4E-09 75.2 17.8 86 213-300 2-89 (288)
61 KOG3662 Cell division control 98.0 5.1E-05 1.1E-09 81.5 11.9 128 209-368 46-182 (410)
62 COG2908 Uncharacterized protei 97.9 2.5E-05 5.4E-10 77.8 6.9 74 216-299 2-80 (237)
63 cd07411 MPP_SoxB_N Thermus the 97.9 0.00047 1E-08 71.1 16.8 61 237-300 35-96 (264)
64 cd07408 MPP_SA0022_N Staphyloc 97.9 0.00052 1.1E-08 70.5 16.6 81 213-300 2-83 (257)
65 TIGR00282 metallophosphoestera 97.8 0.0013 2.9E-08 67.7 18.7 197 213-479 2-204 (266)
66 cd07382 MPP_DR1281 Deinococcus 97.8 0.0013 2.8E-08 67.5 18.5 172 213-443 1-178 (255)
67 cd07405 MPP_UshA_N Escherichia 97.8 0.00045 9.8E-09 72.2 14.8 51 390-444 172-222 (285)
68 TIGR00619 sbcd exonuclease Sbc 97.7 0.00013 2.9E-09 74.8 9.5 85 212-299 1-88 (253)
69 COG0420 SbcD DNA repair exonuc 97.7 0.00013 2.9E-09 79.5 8.9 86 212-300 1-89 (390)
70 cd07425 MPP_Shelphs Shewanella 97.6 9.6E-05 2.1E-09 73.6 6.6 72 215-299 1-80 (208)
71 cd07409 MPP_CD73_N CD73 ecto-5 97.6 0.0014 3.1E-08 68.3 14.6 78 350-444 131-219 (281)
72 cd07407 MPP_YHR202W_N Saccharo 97.6 0.0016 3.4E-08 68.0 14.8 81 350-443 137-231 (282)
73 PHA02546 47 endonuclease subun 97.5 0.00037 8.1E-09 74.6 9.7 84 213-299 2-89 (340)
74 PRK10966 exonuclease subunit S 97.5 0.00037 8E-09 76.4 9.6 85 212-299 1-87 (407)
75 PRK09558 ushA bifunctional UDP 97.5 0.0024 5.2E-08 73.0 16.6 84 210-300 33-122 (551)
76 COG0622 Predicted phosphoester 97.5 0.0072 1.6E-07 58.3 16.9 64 212-299 2-65 (172)
77 PRK09419 bifunctional 2',3'-cy 97.4 0.0051 1.1E-07 76.3 18.7 77 211-300 660-737 (1163)
78 COG0737 UshA 5'-nucleotidase/2 97.3 0.0022 4.8E-08 72.7 13.6 204 211-443 26-247 (517)
79 TIGR01530 nadN NAD pyrophospha 97.2 0.0059 1.3E-07 69.7 15.5 62 237-300 34-95 (550)
80 cd07386 MPP_DNA_pol_II_small_a 97.0 0.0016 3.4E-08 66.3 7.7 77 215-299 2-94 (243)
81 cd08162 MPP_PhoA_N Synechococc 97.0 0.0085 1.8E-07 63.5 13.2 47 213-266 2-51 (313)
82 cd07380 MPP_CWF19_N Schizosacc 97.0 0.0026 5.6E-08 60.0 8.2 45 251-297 24-68 (150)
83 cd07390 MPP_AQ1575 Aquifex aeo 97.0 0.0016 3.4E-08 62.5 6.9 79 215-299 2-82 (168)
84 PHA02239 putative protein phos 97.0 0.0028 6E-08 64.4 8.4 71 213-299 2-73 (235)
85 cd07391 MPP_PF1019 Pyrococcus 96.9 0.0019 4.2E-08 62.2 6.5 59 238-299 28-88 (172)
86 PRK00166 apaH diadenosine tetr 96.7 0.0045 9.7E-08 64.3 7.5 68 213-299 2-69 (275)
87 TIGR00024 SbcD_rel_arch putati 96.6 0.0044 9.5E-08 62.5 7.0 83 212-299 15-102 (225)
88 cd07424 MPP_PrpA_PrpB PrpA and 96.6 0.0043 9.4E-08 61.6 6.7 66 213-299 2-67 (207)
89 cd07423 MPP_PrpE Bacillus subt 96.6 0.005 1.1E-07 62.4 7.0 71 213-299 2-80 (234)
90 cd07421 MPP_Rhilphs Rhilph pho 96.5 0.0097 2.1E-07 61.9 8.6 74 213-299 3-80 (304)
91 PRK04036 DNA polymerase II sma 96.4 0.0099 2.1E-07 67.1 8.8 82 210-299 242-343 (504)
92 COG5555 Cytolysin, a secreted 96.4 0.0031 6.8E-08 63.9 4.1 182 254-447 127-338 (392)
93 PRK09419 bifunctional 2',3'-cy 96.3 0.026 5.6E-07 70.2 12.0 48 390-444 233-281 (1163)
94 cd07413 MPP_PA3087 Pseudomonas 96.3 0.0095 2.1E-07 59.9 6.8 70 214-299 1-76 (222)
95 PRK11907 bifunctional 2',3'-cy 96.2 0.07 1.5E-06 63.2 14.7 89 211-300 115-214 (814)
96 PRK13625 bis(5'-nucleosyl)-tet 96.2 0.012 2.6E-07 60.2 7.0 70 213-298 2-78 (245)
97 PRK11439 pphA serine/threonine 96.2 0.01 2.2E-07 59.6 6.3 66 213-299 18-83 (218)
98 cd07422 MPP_ApaH Escherichia c 96.1 0.011 2.4E-07 60.8 6.6 66 215-299 2-67 (257)
99 PRK09418 bifunctional 2',3'-cy 96.1 0.1 2.2E-06 61.7 14.9 56 211-267 39-97 (780)
100 cd07387 MPP_PolD2_C PolD2 (DNA 96.0 0.17 3.7E-06 52.0 14.6 49 252-300 41-108 (257)
101 PRK09968 serine/threonine-spec 96.0 0.014 3.1E-07 58.5 6.7 66 213-299 16-81 (218)
102 cd00144 MPP_PPP_family phospho 95.9 0.015 3.2E-07 58.0 6.3 67 215-299 1-68 (225)
103 COG4186 Predicted phosphoester 95.4 0.65 1.4E-05 43.7 14.3 78 213-299 5-86 (186)
104 PRK09420 cpdB bifunctional 2', 95.4 0.32 7E-06 56.7 15.4 89 210-300 24-123 (649)
105 TIGR00668 apaH bis(5'-nucleosy 95.3 0.045 9.7E-07 56.8 7.1 67 214-299 3-69 (279)
106 KOG3325 Membrane coat complex 95.0 0.23 5.1E-06 46.0 10.1 84 422-541 98-182 (183)
107 TIGR01390 CycNucDiestase 2',3' 95.0 0.35 7.5E-06 56.2 14.1 87 212-300 3-100 (626)
108 KOG2863 RNA lariat debranching 94.7 0.22 4.8E-06 52.5 10.2 48 252-299 29-88 (456)
109 cd07381 MPP_CapA CapA and rela 94.6 0.44 9.4E-06 48.3 12.1 61 378-446 162-222 (239)
110 PF13277 YmdB: YmdB-like prote 93.9 5.8 0.00013 40.5 18.1 182 237-479 12-199 (253)
111 PF00041 fn3: Fibronectin type 93.9 0.63 1.4E-05 38.0 9.7 70 100-192 2-76 (85)
112 KOG4419 5' nucleotidase [Nucle 92.4 0.85 1.9E-05 51.3 10.4 58 374-444 211-270 (602)
113 COG1692 Calcineurin-like phosp 92.2 7.4 0.00016 39.5 15.7 197 213-478 2-202 (266)
114 cd07420 MPP_RdgC Drosophila me 91.9 0.5 1.1E-05 50.2 7.8 70 213-299 52-123 (321)
115 cd07416 MPP_PP2B PP2B, metallo 91.1 0.65 1.4E-05 49.1 7.6 69 213-299 44-114 (305)
116 COG1407 Predicted ICC-like pho 91.0 0.7 1.5E-05 46.6 7.2 82 213-299 21-110 (235)
117 smart00156 PP2Ac Protein phosp 90.9 0.8 1.7E-05 47.5 7.9 69 213-299 29-99 (271)
118 cd07418 MPP_PP7 PP7, metalloph 90.4 0.71 1.5E-05 50.0 7.2 71 212-299 66-138 (377)
119 KOG2310 DNA repair exonuclease 90.3 1.2 2.5E-05 49.7 8.7 56 210-268 12-67 (646)
120 COG1311 HYS2 Archaeal DNA poly 89.0 1.3 2.9E-05 48.8 7.9 83 210-300 224-322 (481)
121 cd07415 MPP_PP2A_PP4_PP6 PP2A, 89.0 1.2 2.6E-05 46.6 7.4 69 213-299 43-113 (285)
122 cd07414 MPP_PP1_PPKL PP1, PPKL 88.7 1.1 2.4E-05 47.0 7.0 69 213-299 51-121 (293)
123 PTZ00239 serine/threonine prot 88.5 1.3 2.8E-05 46.8 7.2 68 214-299 45-114 (303)
124 cd07417 MPP_PP5_C PP5, C-termi 86.2 1.6 3.5E-05 46.3 6.5 23 420-442 233-255 (316)
125 KOG0196 Tyrosine kinase, EPH ( 86.2 2.8 6.2E-05 48.9 8.6 73 112-207 456-537 (996)
126 PTZ00244 serine/threonine-prot 86.1 1.5 3.3E-05 46.1 6.2 68 214-299 54-123 (294)
127 PTZ00480 serine/threonine-prot 85.9 1.8 4E-05 45.9 6.7 23 420-442 231-253 (320)
128 cd07419 MPP_Bsu1_C Arabidopsis 85.7 2.9 6.2E-05 44.4 8.1 21 420-440 242-262 (311)
129 cd00063 FN3 Fibronectin type 3 84.7 7.6 0.00016 30.9 8.7 22 171-192 56-77 (93)
130 PF09587 PGA_cap: Bacterial ca 82.5 3.8 8.2E-05 41.8 7.2 64 376-447 169-232 (250)
131 smart00854 PGA_cap Bacterial c 82.2 3.1 6.8E-05 42.1 6.4 60 380-447 162-221 (239)
132 smart00060 FN3 Fibronectin typ 81.4 10 0.00022 29.1 8.0 22 171-192 56-77 (83)
133 KOG4221 Receptor mediating net 81.1 4.7 0.0001 49.0 8.0 122 61-208 576-714 (1381)
134 PRK10884 SH3 domain-containing 72.7 1.3 2.9E-05 44.0 0.4 39 575-616 166-204 (206)
135 PF04042 DNA_pol_E_B: DNA poly 72.5 3.7 8.1E-05 40.4 3.6 78 214-300 1-92 (209)
136 KOG3947 Phosphoesterases [Gene 66.7 10 0.00023 39.0 5.3 66 210-301 60-128 (305)
137 PTZ00235 DNA polymerase epsilo 61.7 50 0.0011 34.6 9.3 80 211-299 27-122 (291)
138 PF10179 DUF2369: Uncharacteri 49.2 93 0.002 32.8 8.9 92 97-193 171-281 (300)
139 PRK10301 hypothetical protein; 43.7 1.7E+02 0.0036 26.6 8.7 34 170-203 86-122 (124)
140 PTZ00382 Variant-specific surf 39.9 22 0.00048 30.9 2.3 24 585-608 72-95 (96)
141 KOG4221 Receptor mediating net 38.6 1.9E+02 0.0041 36.1 10.2 36 171-206 573-612 (1381)
142 cd07390 MPP_AQ1575 Aquifex aeo 37.9 31 0.00067 32.7 3.2 17 430-446 124-140 (168)
143 KOG3513 Neural cell adhesion m 37.8 1.3E+02 0.0028 37.0 8.8 22 170-191 875-896 (1051)
144 KOG4258 Insulin/growth factor 36.3 1.2E+02 0.0027 36.2 8.0 114 99-219 487-622 (1025)
145 KOG2476 Uncharacterized conser 35.1 95 0.0021 34.5 6.5 70 212-296 6-75 (528)
146 TIGR02855 spore_yabG sporulati 28.7 42 0.0009 34.7 2.5 50 378-442 115-165 (283)
147 PF05582 Peptidase_U57: YabG p 28.0 53 0.0012 34.1 3.1 26 417-442 140-166 (287)
148 smart00467 GS GS motif. Aa app 26.6 30 0.00065 23.5 0.7 8 559-566 10-17 (30)
149 PF08515 TGF_beta_GS: Transfor 26.4 28 0.0006 23.4 0.5 8 559-566 11-18 (29)
150 cd02856 Glycogen_debranching_e 25.8 94 0.002 26.9 3.9 23 169-191 44-66 (103)
151 cd02852 Isoamylase_N_term Isoa 24.3 96 0.0021 27.5 3.8 23 169-191 48-70 (119)
152 cd07424 MPP_PrpA_PrpB PrpA and 22.1 81 0.0018 30.9 3.1 31 431-478 168-198 (207)
153 KOG0374 Serine/threonine speci 21.9 1.4E+02 0.003 32.1 4.9 23 420-442 233-255 (331)
154 cd02853 MTHase_N_term Maltooli 21.9 1.2E+02 0.0026 25.2 3.7 20 170-190 40-59 (85)
155 cd02860 Pullulanase_N_term Pul 21.2 1.2E+02 0.0026 25.9 3.7 24 169-192 46-69 (100)
156 PF03302 VSP: Giardia variant- 20.8 58 0.0013 35.8 2.0 25 585-609 373-397 (397)
No 1
>KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.6e-69 Score=571.59 Aligned_cols=390 Identities=49% Similarity=0.834 Sum_probs=317.8
Q ss_pred CCCCceeEEEEecCCCCceEEEEEecCCCceEEEEEccCCCCCcE-EEeeEEEEeeccccCCCCCCcccccCCceEEEEE
Q 006938 97 DGTGPRAGALGFTEDASEMRVMFLAEDGEKRYVKYGEKKDQMGHV-AVASVERYERGQMCDKPANSSIGWRDPGWIFDAV 175 (625)
Q Consensus 97 ~~~~P~qv~L~~~~~~~~~~V~W~T~~~~~~~V~yg~~~~~~~~~-~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~a~ 175 (625)
..+.|+||||++++..++|+|+|.|.+.....|+||......... +.+.+..+ |+... .+|+..|++|+|+
T Consensus 41 ~~~~peQvhlS~~~~~~~m~VswvT~~~~~~~V~Yg~~~~~~~~~~~~~~~~~~-----~~~y~---~~~~~sg~ih~~~ 112 (452)
T KOG1378|consen 41 VVNSPEQVHLSFTDNLNEMRVSWVTGDGEENVVRYGEVKDKLDNSAARGMTEAW-----TDGYA---NGWRDSGYIHDAV 112 (452)
T ss_pred cCCCCCeEEEeccCCCCcEEEEEeCCCCCCceEEEeecCCCccccccccceEEE-----ecccc---cccceeeeEeeee
Confidence 446699999999999889999999999888999999876553322 12333332 22222 2456789999999
Q ss_pred EcCCCCCcEEEEEEecCCCCcceeEEEEcCCCCCCcceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCc
Q 006938 176 IKGLKKGVRYYYKVGSDSKGWSETHSFVSRNEDSNETIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPA 255 (625)
Q Consensus 176 ltgL~PgT~Y~YrV~~~~~~~S~~~~F~T~p~~~~~~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pd 255 (625)
|++|+|+|+||||||++. .||++|+|+|+|....+.++++|||+|...... .++.. .. ...++|
T Consensus 113 ~~~L~~~t~YyY~~Gs~~-~wS~~f~F~t~p~~~~~~~~~i~GDlG~~~~~~----------s~~~~----~~-~~~k~d 176 (452)
T KOG1378|consen 113 MKNLEPNTRYYYQVGSDL-KWSEIFSFKTPPGQDSPTRAAIFGDMGCTEPYT----------STLRN----QE-ENLKPD 176 (452)
T ss_pred ecCCCCCceEEEEeCCCC-CcccceEeECCCCccCceeEEEEcccccccccc----------chHhH----Hh-cccCCc
Confidence 999999999999999986 599999999999555678999999999986532 11111 11 134799
Q ss_pred EEEEcCccccCCCch-hhHHHHHHhHHHhhcCCceEEccCCCCCCCCCCCCCCCCCCCccCCCCCCccccccccccccCC
Q 006938 256 FVSHIGDISYARGYS-WLWDEFFALIEPVASRVAYHVCIGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKFHMPG 334 (625)
Q Consensus 256 fvl~~GDivy~~g~~-~~wd~f~~~l~~~~~~iP~~~v~GNHD~~~~~~~~~~~~~~~~Y~~d~gge~~~~y~~~f~~P~ 334 (625)
+|||+||++|+++.. .+||+|++++||+++.+|+|++.||||+++... .|+.+|..||.||.
T Consensus 177 ~vlhiGDlsYa~~~~n~~wD~f~r~vEp~As~vPymv~~GNHE~d~~~~-----------------~~F~~y~~Rf~mP~ 239 (452)
T KOG1378|consen 177 AVLHIGDLSYAMGYSNWQWDEFGRQVEPIASYVPYMVCSGNHEIDWPPQ-----------------PCFVPYSARFNMPG 239 (452)
T ss_pred EEEEecchhhcCCCCccchHHHHhhhhhhhccCceEEecccccccCCCc-----------------ccccccceeeccCC
Confidence 999999999999988 699999999999999999999999999985421 15567999999998
Q ss_pred CCCCCCCCCCCCCCCceEEEEeCcEEEEEEeCCccc--CCChHHHHHHHHHhhccccCCCCeEEEEcccCCccCCC--CC
Q 006938 335 NSLEPTGTRAPATRNLYYSFDMGVVHFVYISTETNF--LQGSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSN--EN 410 (625)
Q Consensus 335 ~~~~~~G~~~~~~~~~yYsfd~G~v~fI~LDT~~~~--~~~~~Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~--~~ 410 (625)
++..+ ..+.||||++|.||||+|+|+.++ ..+.+|++||+++|++++|+++||+||++|+|+|++.. +.
T Consensus 240 ~~s~s-------~~~l~YSfd~G~vhfv~lsse~~~~~~~~~~QY~WL~~dL~~v~r~~tPWlIv~~HrP~Y~S~~~~~~ 312 (452)
T KOG1378|consen 240 NSSES-------DSNLYYSFDVGGVHFVVLSTETYYNFLKGTAQYQWLERDLASVDRKKTPWLIVQGHRPMYCSSNDAHY 312 (452)
T ss_pred CcCCC-------CCceeEEEeeccEEEEEEeccccccccccchHHHHHHHHHHHhcccCCCeEEEEecccceecCCchhh
Confidence 76432 246899999999999999999874 35689999999999999987799999999999999987 33
Q ss_pred CChhhhHHHHHHHHHHHHHcCceEEEEcCccCceeeeccCCccccCCCCCCC-CCCCCcEEEEECCCCCCCCCCCCCCCC
Q 006938 411 RDAPLRNRMLEHLEPLFVENNVTLALWGHVHRYERFCPLNNFTCGSMGMDGE-PSEAFPVHIVIGMAGQDWQPIWQPRPD 489 (625)
Q Consensus 411 ~d~~~~~~~~~~l~~l~~ky~VdlvlsGH~H~yeR~~p~~~~~~~~~~~~~~-~~~~g~vyIv~G~gG~~~~~~~~~~~~ 489 (625)
.. ...+.+++.|++||.+|+||++|+||.|.|||++|++|.+|.+.+.... -++++|+||++|.||+....
T Consensus 313 re-G~~~~~~~~LE~l~~~~~VDvvf~GHvH~YER~~piyn~~~~~~~~~~~~~d~~aPvyI~~G~~G~~e~~------- 384 (452)
T KOG1378|consen 313 RE-GEFESMREGLEPLFVKYKVDVVFWGHVHRYERFCPIYNNTCGTGWGPVHLVDGMAPIYITVGDGGNHEHL------- 384 (452)
T ss_pred cc-CcchhhHHHHHHHHHHhceeEEEeccceehhccchhhcceeeccCCcccccCCCCCEEEEEccCCccccc-------
Confidence 22 2234678899999999999999999999999999999999977765333 35899999999999976321
Q ss_pred CCCCCCCCCCCccceeeCcccEEEEEE-eCCEEEEEEEECC--CCcEEEEEEEEecCc
Q 006938 490 HPDDPVFPQPMRSLYRGGEFGYTRLVA-TKEKLTLSYVGNH--DGEVHDMVEILASGQ 544 (625)
Q Consensus 490 ~~~~~~~~~p~ws~~~~~~~Gy~~v~v-~~~~L~~~~i~~~--dG~v~D~f~I~k~~~ 544 (625)
+....++|+||+||...|||++|++ |.+++.++++++. +|+++|+|+|.|+-.
T Consensus 385 --~~~~~~~p~~Sa~R~~dfG~~~L~v~N~TH~~~~~~~~~d~~g~~~D~fwl~k~~~ 440 (452)
T KOG1378|consen 385 --DPFSSPQPEWSAFREGDFGYTRLTAKNGTHAHVHWVRNSDASGVVIDSFWLIKDYR 440 (452)
T ss_pred --CcccCCCCcccccccccCCeEEEEEecCceEEEEEEeccCCCceEeeeEEEEcccC
Confidence 1112378999999999999999997 7889999999863 378999999998643
No 2
>PLN02533 probable purple acid phosphatase
Probab=100.00 E-value=9.5e-68 Score=575.73 Aligned_cols=379 Identities=30% Similarity=0.428 Sum_probs=311.6
Q ss_pred CCCCCceeEEEEecCCCCceEEEEEecCCCceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEEEE
Q 006938 96 RDGTGPRAGALGFTEDASEMRVMFLAEDGEKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFDAV 175 (625)
Q Consensus 96 ~~~~~P~qv~L~~~~~~~~~~V~W~T~~~~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~a~ 175 (625)
++...|+||||++++ +++|+|+|.|.+...+.|+||++++.+..++.+++.+|... ..| .++++|+|+
T Consensus 39 ~~~~~P~qvhls~~~-~~~m~V~W~T~~~~~~~V~yG~~~~~l~~~a~g~~~~~~~~----------~~~-~~g~iH~v~ 106 (427)
T PLN02533 39 DDPTHPDQVHISLVG-PDKMRISWITQDSIPPSVVYGTVSGKYEGSANGTSSSYHYL----------LIY-RSGQINDVV 106 (427)
T ss_pred CCCCCCceEEEEEcC-CCeEEEEEECCCCCCCEEEEecCCCCCcceEEEEEEEEecc----------ccc-cCCeEEEEE
Confidence 467889999999997 89999999999988899999999988888888888888631 123 368999999
Q ss_pred EcCCCCCcEEEEEEecCCCCcceeEEEEcCCCCCCcceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCc
Q 006938 176 IKGLKKGVRYYYKVGSDSKGWSETHSFVSRNEDSNETIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPA 255 (625)
Q Consensus 176 ltgL~PgT~Y~YrV~~~~~~~S~~~~F~T~p~~~~~~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pd 255 (625)
|+||+|+|+|+|||+.+ .+|++++|+|+|.. .+++|+++||+|.... ...++ +.++ +.+||
T Consensus 107 l~~L~p~T~Y~Yrvg~~--~~s~~~~F~T~p~~-~~~~f~v~GDlG~~~~----------~~~tl----~~i~--~~~pD 167 (427)
T PLN02533 107 IGPLKPNTVYYYKCGGP--SSTQEFSFRTPPSK-FPIKFAVSGDLGTSEW----------TKSTL----EHVS--KWDYD 167 (427)
T ss_pred eCCCCCCCEEEEEECCC--CCccceEEECCCCC-CCeEEEEEEeCCCCcc----------cHHHH----HHHH--hcCCC
Confidence 99999999999999964 46899999999863 6799999999986531 12233 3333 35899
Q ss_pred EEEEcCccccCCCchhhHHHHHHhHHHhhcCCceEEccCCCCCCCCCCCCCCCCCCCccCCCCCCccccccccccccCCC
Q 006938 256 FVSHIGDISYARGYSWLWDEFFALIEPVASRVAYHVCIGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKFHMPGN 335 (625)
Q Consensus 256 fvl~~GDivy~~g~~~~wd~f~~~l~~~~~~iP~~~v~GNHD~~~~~~~~~~~~~~~~Y~~d~gge~~~~y~~~f~~P~~ 335 (625)
|||++||++|+++++.+|+.|++.++++.+.+|+|+++||||...... ...+.+.+|..+|.||.+
T Consensus 168 ~vl~~GDl~y~~~~~~~wd~f~~~i~~l~s~~P~m~~~GNHE~~~~~~--------------~~~~~f~~y~~rf~mP~~ 233 (427)
T PLN02533 168 VFILPGDLSYANFYQPLWDTFGRLVQPLASQRPWMVTHGNHELEKIPI--------------LHPEKFTAYNARWRMPFE 233 (427)
T ss_pred EEEEcCccccccchHHHHHHHHHHhhhHhhcCceEEeCcccccccccc--------------ccCcCccchhhcccCCcc
Confidence 999999999998888899999999999999999999999999863210 011233458889999975
Q ss_pred CCCCCCCCCCCCCCceEEEEeCcEEEEEEeCCcccCCChHHHHHHHHHhhccccCCCCeEEEEcccCCccCCCCCCChhh
Q 006938 336 SLEPTGTRAPATRNLYYSFDMGVVHFVYISTETNFLQGSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAPL 415 (625)
Q Consensus 336 ~~~~~G~~~~~~~~~yYsfd~G~v~fI~LDT~~~~~~~~~Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~~~d~~~ 415 (625)
.. | ...+.||||++|++|||+||++.++..+.+|++||+++|++++++++||+||++|+|+|++.....+...
T Consensus 234 ~~---g----~~~~~yYSfd~g~vhfI~Lds~~~~~~~~~Q~~WLe~dL~~~~r~~~pwiIv~~H~P~y~s~~~~~~~~~ 306 (427)
T PLN02533 234 ES---G----STSNLYYSFNVYGVHIIMLGSYTDFEPGSEQYQWLENNLKKIDRKTTPWVVAVVHAPWYNSNEAHQGEKE 306 (427)
T ss_pred cc---C----CCCCceEEEEECCEEEEEEeCCccccCchHHHHHHHHHHHhhcccCCCEEEEEeCCCeeecccccCCcch
Confidence 32 1 1257899999999999999999887778999999999999988888999999999999987643322222
Q ss_pred hHHHHHHHHHHHHHcCceEEEEcCccCceeeeccCCccccCCCCCCCCCCCCcEEEEECCCCCCCCCCCCCCCCCCCCCC
Q 006938 416 RNRMLEHLEPLFVENNVTLALWGHVHRYERFCPLNNFTCGSMGMDGEPSEAFPVHIVIGMAGQDWQPIWQPRPDHPDDPV 495 (625)
Q Consensus 416 ~~~~~~~l~~l~~ky~VdlvlsGH~H~yeR~~p~~~~~~~~~~~~~~~~~~g~vyIv~G~gG~~~~~~~~~~~~~~~~~~ 495 (625)
...+++.|++||.+|+||++|+||+|.|||++|++++++. +++|+||++|+||+.... +....
T Consensus 307 ~~~~r~~le~Ll~~~~VdlvlsGH~H~YeR~~p~~~~~~~---------~~gpvyiv~G~gG~~e~~--------~~~~~ 369 (427)
T PLN02533 307 SVGMKESMETLLYKARVDLVFAGHVHAYERFDRVYQGKTD---------KCGPVYITIGDGGNREGL--------ATKYI 369 (427)
T ss_pred hHHHHHHHHHHHHHhCCcEEEecceecccccccccCCccC---------CCCCEEEEeCCCcccccc--------ccccC
Confidence 3456889999999999999999999999999999998762 589999999999986421 11122
Q ss_pred CCCCCccceeeCcccEEEEEE-eCCEEEEEEEECCCCc--EEEEEEEEecC
Q 006938 496 FPQPMRSLYRGGEFGYTRLVA-TKEKLTLSYVGNHDGE--VHDMVEILASG 543 (625)
Q Consensus 496 ~~~p~ws~~~~~~~Gy~~v~v-~~~~L~~~~i~~~dG~--v~D~f~I~k~~ 543 (625)
.++|+|++|+...|||++|++ |.++|.++|+++.+|+ +.|+|+|.|..
T Consensus 370 ~~~~~~s~~r~~~~G~~~l~v~n~t~l~~~~~~~~~~~~~~~D~~~i~~~~ 420 (427)
T PLN02533 370 DPKPDISLFREASFGHGQLNVVDANTMEWTWHRNDDDQSVASDSVWLKSLL 420 (427)
T ss_pred CCCCCceeEEeccCCEEEEEEEcCCeEEEEEEecCCCCceeeeEEEEEecc
Confidence 367899999999999999985 9999999999877763 89999998753
No 3
>cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain. Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver
Probab=100.00 E-value=3.1e-44 Score=374.65 Aligned_cols=286 Identities=39% Similarity=0.639 Sum_probs=219.8
Q ss_pred CcceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCch--hhHHHHHHhHHHhhcCC
Q 006938 210 NETIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYS--WLWDEFFALIEPVASRV 287 (625)
Q Consensus 210 ~~~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~--~~wd~f~~~l~~~~~~i 287 (625)
.+++|+++||+|.... .+.++++++.+. ..+|||||++||++|+.+.. .+|+.|++.++++...+
T Consensus 3 ~~~~f~v~gD~~~~~~---------~~~~~~~~l~~~----~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (294)
T cd00839 3 TPFKFAVFGDMGQNTN---------NSTNTLDHLEKE----LGNYDAILHVGDLAYADGYNNGSRWDTFMRQIEPLASYV 69 (294)
T ss_pred CcEEEEEEEECCCCCC---------CcHHHHHHHHhc----cCCccEEEEcCchhhhcCCccchhHHHHHHHHHHHHhcC
Confidence 5689999999997522 234555555432 46899999999999988765 78999999999999999
Q ss_pred ceEEccCCCCCCCCCCCCCCCCCCCccCCCCCCccccccccccccCCCCCCCCCCCCCCCCCceEEEEeCcEEEEEEeCC
Q 006938 288 AYHVCIGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKFHMPGNSLEPTGTRAPATRNLYYSFDMGVVHFVYISTE 367 (625)
Q Consensus 288 P~~~v~GNHD~~~~~~~~~~~~~~~~Y~~d~gge~~~~y~~~f~~P~~~~~~~G~~~~~~~~~yYsfd~G~v~fI~LDT~ 367 (625)
|+++++||||+........ . . .+..++.++.... ....+.||+|++|++|||+|||+
T Consensus 70 P~~~~~GNHD~~~~~~~~~---~----~---------~~~~~~~~~~~~~-------~~~~~~~Ysf~~g~v~fi~Lds~ 126 (294)
T cd00839 70 PYMVTPGNHEADYNFSFYK---I----K---------AFFPRFRFPHSPS-------GSTSNLWYSFDVGPVHFVSLSTE 126 (294)
T ss_pred CcEEcCcccccccCCCCcc---c----c---------cccccccccCCCC-------CCCCCceEEEeeCCEEEEEEecc
Confidence 9999999999974321100 0 0 0011222222211 11356799999999999999998
Q ss_pred ccc---CCChHHHHHHHHHhhccccCCCCeEEEEcccCCccCCCCCCChhhhHHHHHHHHHHHHHcCceEEEEcCccCce
Q 006938 368 TNF---LQGSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVENNVTLALWGHVHRYE 444 (625)
Q Consensus 368 ~~~---~~~~~Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~~~d~~~~~~~~~~l~~l~~ky~VdlvlsGH~H~ye 444 (625)
... ..+.+|++||+++|+++++++.+|+||++|+|+|+.......+......++.|++||++|+|+++|+||+|.|+
T Consensus 127 ~~~~~~~~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~~~l~~ll~~~~v~~vl~GH~H~y~ 206 (294)
T cd00839 127 VDFYGDGPGSPQYDWLEADLAKVDRSKTPWIIVMGHRPMYCSNTDHDDCIEGEKMRAALEDLFYKYGVDLVLSGHVHAYE 206 (294)
T ss_pred cccccCCCCcHHHHHHHHHHHHhcccCCCeEEEEeccCcEecCccccccchhHHHHHHHHHHHHHhCCCEEEEccceeeE
Confidence 654 46789999999999987766779999999999998765543322345678899999999999999999999999
Q ss_pred eeeccCCccccCCCCCCCCCCCCcEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCccceeeCcccEEEEEEeCC-EEEE
Q 006938 445 RFCPLNNFTCGSMGMDGEPSEAFPVHIVIGMAGQDWQPIWQPRPDHPDDPVFPQPMRSLYRGGEFGYTRLVATKE-KLTL 523 (625)
Q Consensus 445 R~~p~~~~~~~~~~~~~~~~~~g~vyIv~G~gG~~~~~~~~~~~~~~~~~~~~~p~ws~~~~~~~Gy~~v~v~~~-~L~~ 523 (625)
|++|+++++|. .......++++++||++|+||+.++..... .+.++|++++...+||++|++..+ +|++
T Consensus 207 r~~p~~~~~~~-~~~~~~~~~~g~~yiv~G~~G~~~~~~~~~---------~~~~~~~~~~~~~~g~~~~~~~~~t~l~~ 276 (294)
T cd00839 207 RTCPVYNGTVV-GDCNPYSNPKGPVHIVIGAGGNDEGLDPFS---------APPPAWSAFRESDYGFGRLTVHNSTHLHF 276 (294)
T ss_pred eechhhCCEec-cccccccCCCccEEEEECCCccccCcCccc---------CCCCCceEEEeccCCEEEEEEEecCeEEE
Confidence 99999998875 111122247899999999999987643211 123688989899999999998654 9999
Q ss_pred EEEECCCCcEEEEEEEEe
Q 006938 524 SYVGNHDGEVHDMVEILA 541 (625)
Q Consensus 524 ~~i~~~dG~v~D~f~I~k 541 (625)
+++.+.+|+++|+|+|.|
T Consensus 277 ~~~~~~~g~v~D~f~i~k 294 (294)
T cd00839 277 EWIRNDDGVVIDSFWIIK 294 (294)
T ss_pred EEEECCCCeEEEEEEEeC
Confidence 999888999999999986
No 4
>PTZ00422 glideosome-associated protein 50; Provisional
Probab=100.00 E-value=6.7e-34 Score=301.29 Aligned_cols=287 Identities=19% Similarity=0.258 Sum_probs=198.3
Q ss_pred EEcCCCCCCcceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCC---chhhHHHHHH
Q 006938 202 FVSRNEDSNETIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARG---YSWLWDEFFA 278 (625)
Q Consensus 202 F~T~p~~~~~~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g---~~~~wd~f~~ 278 (625)
|.+.......++|+++||+|.+.. .|...++.|..+. + ..++||||.+||+++.+- .+.+|++-|+
T Consensus 17 ~~~~~~~~~~l~F~~vGDwG~g~~------~Q~~VA~~M~~~~----~-~~~~~FVls~GDNF~~Gv~sv~Dp~f~~~FE 85 (394)
T PTZ00422 17 FISSYSVKAQLRFASLGNWGTGSK------QQKLVASYLKQYA----K-NERVTFLVSPGSNFPGGVDGLNDPKWKHCFE 85 (394)
T ss_pred EEeecccCCeEEEEEEecCCCCch------hHHHHHHHHHHHH----H-hCCCCEEEECCccccCCCCCccchhHHhhHh
Confidence 444444455789999999997532 2444343333332 2 368999999999984332 3567777666
Q ss_pred hHH-Hhh--cCCceEEccCCCCCCCCCCCCCCCCCCCccCCCCCC---c--cccccccccccCCCCCCCCCCCCCCCCCc
Q 006938 279 LIE-PVA--SRVAYHVCIGNHEYDWPLQPWKPDWSYTVYGTDGGG---E--CGVPYSLKFHMPGNSLEPTGTRAPATRNL 350 (625)
Q Consensus 279 ~l~-~~~--~~iP~~~v~GNHD~~~~~~~~~~~~~~~~Y~~d~gg---e--~~~~y~~~f~~P~~~~~~~G~~~~~~~~~ 350 (625)
.+. ... .++||++++||||+.++.++--..+.+ .|-...+. + .......||.||. .
T Consensus 86 ~vY~~~s~~L~~Pwy~vLGNHDy~Gn~~AQi~r~~~-~y~~~~~~~~~~y~~~~~~~~RW~mP~---------------~ 149 (394)
T PTZ00422 86 NVYSEESGDMQIPFFTVLGQADWDGNYNAELLKGQN-VYLNGHGQTDIEYDSNNDIYPKWIMPN---------------Y 149 (394)
T ss_pred hhccCcchhhCCCeEEeCCcccccCCchhhhccccc-cccccccccccccccccccCCCccCCc---------------h
Confidence 553 223 579999999999997653321110110 01000000 0 0001245888884 4
Q ss_pred eEEE----Ee-------------CcEEEEEEeCCcc---c---CCChHHHHHHHHHhhccccCCCCeEEEEcccCCccCC
Q 006938 351 YYSF----DM-------------GVVHFVYISTETN---F---LQGSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTS 407 (625)
Q Consensus 351 yYsf----d~-------------G~v~fI~LDT~~~---~---~~~~~Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~ 407 (625)
||++ .. ..+.||+|||... + .....|++||+++|+.+ ++.++|+||++|||+|+.+
T Consensus 150 yY~~~~~f~~~~~~~~~~~~~~~~~v~fifiDT~~l~~~~~~~~~~~~~w~~L~~~L~~a-~k~a~WkIVvGHhPIySsG 228 (394)
T PTZ00422 150 WYHYFTHFTDTSGPSLLKSGHKDMSVAFIFIDTWILSSSFPYKKVSERAWQDLKATLEYA-PKIADYIIVVGDKPIYSSG 228 (394)
T ss_pred hheeeeeeecccccccccccCCCCEEEEEEEECchhcccCCccccCHHHHHHHHHHHHhh-ccCCCeEEEEecCceeecC
Confidence 6654 21 2289999999621 1 12468999999999754 3567899999999999998
Q ss_pred CCCCChhhhHHHHHHHHHHHHHcCceEEEEcCccCceeeeccCCccccCCCCCCCCCCCCcEEEEECCCCCCCCCCCCCC
Q 006938 408 NENRDAPLRNRMLEHLEPLFVENNVTLALWGHVHRYERFCPLNNFTCGSMGMDGEPSEAFPVHIVIGMAGQDWQPIWQPR 487 (625)
Q Consensus 408 ~~~~d~~~~~~~~~~l~~l~~ky~VdlvlsGH~H~yeR~~p~~~~~~~~~~~~~~~~~~g~vyIv~G~gG~~~~~~~~~~ 487 (625)
.++.+ ..+++.|+|||++|+||++|+||+|+||+.. .+++.||++|+||...+..
T Consensus 229 ~hg~~----~~L~~~L~PLL~ky~VdlYisGHDH~lq~i~-----------------~~gt~yIvSGaGs~~~~~~---- 283 (394)
T PTZ00422 229 SSKGD----SYLSYYLLPLLKDAQVDLYISGYDRNMEVLT-----------------DEGTAHINCGSGGNSGRKS---- 283 (394)
T ss_pred CCCCC----HHHHHHHHHHHHHcCcCEEEEccccceEEec-----------------CCCceEEEeCccccccCCC----
Confidence 76544 4578899999999999999999999999974 2568899999998864321
Q ss_pred CCCCCCCCCCCCCccceeeCcccEEEEEEeCCEEEEEEEECCCCcEEEEEEEEecCccccCC
Q 006938 488 PDHPDDPVFPQPMRSLYRGGEFGYTRLVATKEKLTLSYVGNHDGEVHDMVEILASGQVLSGD 549 (625)
Q Consensus 488 ~~~~~~~~~~~p~ws~~~~~~~Gy~~v~v~~~~L~~~~i~~~dG~v~D~f~I~k~~~~~~~~ 549 (625)
. ...+++.|....+||+.++++++.|+++|+.+.+|++++++++.++......-
T Consensus 284 ----~----~~~~~s~F~~~~~GF~~~~l~~~~l~~~fid~~~GkvL~~~~~~~~~~~~~~~ 337 (394)
T PTZ00422 284 ----I----MKNSKSLFYSEDIGFCIHELNAEGMVTKFVSGNTGEVLYTHKQPLKKRKLRFQ 337 (394)
T ss_pred ----C----CCCCCcceecCCCCEEEEEEecCEEEEEEEeCCCCcEEEEeeecccchhhhhh
Confidence 0 12456778888899999999999999999965799999999997776554433
No 5
>cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain. Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma
Probab=99.98 E-value=1.2e-30 Score=270.09 Aligned_cols=251 Identities=22% Similarity=0.350 Sum_probs=173.1
Q ss_pred ceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCch----hhHH-HHHHhHHHhhcC
Q 006938 212 TIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYS----WLWD-EFFALIEPVASR 286 (625)
Q Consensus 212 ~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~----~~wd-~f~~~l~~~~~~ 286 (625)
++|+++||+|..... .|. +..+.|.+.++ ..+|||||++||++|..+.. ..|. .|.+.+..+...
T Consensus 1 ~~f~~~gD~g~~~~~-----~~~---~~~~~~~~~~~--~~~~dfvv~~GD~~y~~g~~~~~~~~~~~~~~~~~~~~~~~ 70 (277)
T cd07378 1 LRFLALGDWGGGGTA-----GQK---AVAKAMAKVAA--ELGPDFILSLGDNFYDDGVGSVDDPRFETTFEDVYSAPSLQ 70 (277)
T ss_pred CeEEEEeecCCCCCH-----HHH---HHHHHHHHHHH--hcCCCEEEeCCCccccCCCCCCcchHHHHHHHHHccchhhc
Confidence 379999999986211 122 22222333222 26899999999999987632 3343 333333434468
Q ss_pred CceEEccCCCCCCCCCCCCCCCCCCCccCCCCCCccccccccccccCCCCCCCCCCCCCCCCCceEEEEeC------cEE
Q 006938 287 VAYHVCIGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKFHMPGNSLEPTGTRAPATRNLYYSFDMG------VVH 360 (625)
Q Consensus 287 iP~~~v~GNHD~~~~~~~~~~~~~~~~Y~~d~gge~~~~y~~~f~~P~~~~~~~G~~~~~~~~~yYsfd~G------~v~ 360 (625)
+|+++++||||+...... .. .|.. ..+..+|.+| ..||+|+++ +++
T Consensus 71 ~P~~~v~GNHD~~~~~~~---~~---~~~~-------~~~~~~~~~~---------------~~~y~~~~~~~~~~~~~~ 122 (277)
T cd07378 71 VPWYLVLGNHDYSGNVSA---QI---DYTK-------RPNSPRWTMP---------------AYYYRVSFPFPSSDTTVE 122 (277)
T ss_pred CCeEEecCCcccCCCchh---ee---ehhc-------cCCCCCccCc---------------chheEEEeecCCCCCEEE
Confidence 999999999998632100 00 0100 0012233333 359999998 799
Q ss_pred EEEEeCCccc---------------CCChHHHHHHHHHhhccccCCCCeEEEEcccCCccCCCCCCChhhhHHHHHHHHH
Q 006938 361 FVYISTETNF---------------LQGSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEP 425 (625)
Q Consensus 361 fI~LDT~~~~---------------~~~~~Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~~~d~~~~~~~~~~l~~ 425 (625)
||+|||.... ..+.+|++||+++|+++. .+|+||++|+|+++....... ...++.|.+
T Consensus 123 ~i~LDt~~~~~~~~~~~~~~~~~~~~~~~~Q~~wL~~~L~~~~---~~~~iv~~H~P~~~~~~~~~~----~~~~~~l~~ 195 (277)
T cd07378 123 FIMIDTVPLCGNSDDIASPYGPPNGKLAEEQLAWLEKTLAAST---ADWKIVVGHHPIYSSGEHGPT----SCLVDRLLP 195 (277)
T ss_pred EEEEeChhHcCccccccccccCcchhhHHHHHHHHHHHHHhcC---CCeEEEEeCccceeCCCCCCc----HHHHHHHHH
Confidence 9999997421 135799999999999853 379999999999987544322 345789999
Q ss_pred HHHHcCceEEEEcCccCceeeeccCCccccCCCCCCCCCCCCcEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCcccee
Q 006938 426 LFVENNVTLALWGHVHRYERFCPLNNFTCGSMGMDGEPSEAFPVHIVIGMAGQDWQPIWQPRPDHPDDPVFPQPMRSLYR 505 (625)
Q Consensus 426 l~~ky~VdlvlsGH~H~yeR~~p~~~~~~~~~~~~~~~~~~g~vyIv~G~gG~~~~~~~~~~~~~~~~~~~~~p~ws~~~ 505 (625)
++++++|+++|+||.|.+++..+. ..++.||++|+||......... ....+.|..++
T Consensus 196 l~~~~~v~~vl~GH~H~~~~~~~~---------------~~~~~~i~~G~~~~~~~~~~~~--------~~~~~~~~~~~ 252 (277)
T cd07378 196 LLKKYKVDAYLSGHDHNLQHIKDD---------------GSGTSFVVSGAGSKARPSVKHI--------DKVPQFFSGFT 252 (277)
T ss_pred HHHHcCCCEEEeCCcccceeeecC---------------CCCcEEEEeCCCcccCCCCCcc--------Ccccccccccc
Confidence 999999999999999999988631 2578999999888765432110 01124677788
Q ss_pred eCcccEEEEEEeCCEEEEEEEECCCC
Q 006938 506 GGEFGYTRLVATKEKLTLSYVGNHDG 531 (625)
Q Consensus 506 ~~~~Gy~~v~v~~~~L~~~~i~~~dG 531 (625)
...+||.+|+|++++|+++|+ +.+|
T Consensus 253 ~~~~Gy~~i~v~~~~l~~~~~-~~~g 277 (277)
T cd07378 253 SSGGGFAYLELTKEELTVRFY-DADG 277 (277)
T ss_pred cCCCCEEEEEEecCEEEEEEE-CCCC
Confidence 899999999999999999999 5665
No 6
>cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain. CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th
Probab=99.95 E-value=3.7e-27 Score=242.26 Aligned_cols=244 Identities=20% Similarity=0.230 Sum_probs=170.8
Q ss_pred CcceEEEEEecCCCCCCCccc---ccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCch----hhHHHHHHhHHH
Q 006938 210 NETIAFLFGDMGAATPYTTFE---RTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYS----WLWDEFFALIEP 282 (625)
Q Consensus 210 ~~~~f~v~GD~g~~~~~~~~~---~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~----~~wd~f~~~l~~ 282 (625)
.+++|++++|+|.+.....+. .........++.+++.+++..++||||+++||+++..... .+|+.+.+.++.
T Consensus 3 ~~~~f~~~sD~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~pd~ii~~GDl~~~~~~~~~~~~~~~~~~~~~~~ 82 (262)
T cd07395 3 GPFYFIQGADPQLGLIKKNLEGGGDEWDEEIKLTEQAVQAINKLNPKPKFVVVCGDLVNAMPGDELRERQVSDLKDVLSL 82 (262)
T ss_pred CCEEEEEecCCccchhhccccCchhhhhhHHHHHHHHHHHHHhcCCCCCEEEEeCCcCCCCcchhhHHHHHHHHHHHHhh
Confidence 468999999999985322111 1122334456777777776667999999999999876543 345566666666
Q ss_pred hhcCCceEEccCCCCCCCCCCCCCCCCCCCccCCCCCCccccccccccccCCCCCCCCCCCCCCCCCceEEEEeCcEEEE
Q 006938 283 VASRVAYHVCIGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKFHMPGNSLEPTGTRAPATRNLYYSFDMGVVHFV 362 (625)
Q Consensus 283 ~~~~iP~~~v~GNHD~~~~~~~~~~~~~~~~Y~~d~gge~~~~y~~~f~~P~~~~~~~G~~~~~~~~~yYsfd~G~v~fI 362 (625)
+...+|+++++||||+..... . +....|...| +..||+|++|+++||
T Consensus 83 ~~~~vp~~~i~GNHD~~~~~~--~--------------~~~~~f~~~~-----------------g~~~y~~~~~~~~~i 129 (262)
T cd07395 83 LDPDIPLVCVCGNHDVGNTPT--E--------------ESIKDYRDVF-----------------GDDYFSFWVGGVFFI 129 (262)
T ss_pred ccCCCcEEEeCCCCCCCCCCC--h--------------hHHHHHHHHh-----------------CCcceEEEECCEEEE
Confidence 556799999999999852110 0 0000121122 235899999999999
Q ss_pred EEeCCccc------CCChHHHHHHHHHhhccccCCCCeEEEEcccCCccCCCCCCCh--hhhHHHHHHHHHHHHHcCceE
Q 006938 363 YISTETNF------LQGSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDA--PLRNRMLEHLEPLFVENNVTL 434 (625)
Q Consensus 363 ~LDT~~~~------~~~~~Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~~~d~--~~~~~~~~~l~~l~~ky~Vdl 434 (625)
+|||.... ....+|++||+++|+++.+.+.+++||++|+|++.......+. ......+++|.++|++++|++
T Consensus 130 ~lds~~~~~~~~~~~~~~~ql~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~V~~ 209 (262)
T cd07395 130 VLNSQLFFDPSEVPELAQAQDVWLEEQLEIAKESDCKHVIVFQHIPWFLEDPDEEDSYFNIPKSVRKPLLDKFKKAGVKA 209 (262)
T ss_pred EeccccccCccccccchHHHHHHHHHHHHHHHhccCCcEEEEECcCCccCCCCCCcccCCcCHHHHHHHHHHHHhcCceE
Confidence 99996432 1247899999999998754456789999999998654332211 123456789999999999999
Q ss_pred EEEcCccCceeeeccCCccccCCCCCCCCCCCCcEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCccceeeCcccEEEE
Q 006938 435 ALWGHVHRYERFCPLNNFTCGSMGMDGEPSEAFPVHIVIGMAGQDWQPIWQPRPDHPDDPVFPQPMRSLYRGGEFGYTRL 514 (625)
Q Consensus 435 vlsGH~H~yeR~~p~~~~~~~~~~~~~~~~~~g~vyIv~G~gG~~~~~~~~~~~~~~~~~~~~~p~ws~~~~~~~Gy~~v 514 (625)
+|+||+|.+.+.. .+++.++++++.|..+. ....||..+
T Consensus 210 v~~GH~H~~~~~~-----------------~~g~~~~~~~~~~~~~~------------------------~~~~g~~~~ 248 (262)
T cd07395 210 VFSGHYHRNAGGR-----------------YGGLEMVVTSAIGAQLG------------------------NDKSGLRIV 248 (262)
T ss_pred EEECccccCCceE-----------------ECCEEEEEcCceecccC------------------------CCCCCcEEE
Confidence 9999999987642 14566788877775421 123699999
Q ss_pred EEeCCEEEEEEEE
Q 006938 515 VATKEKLTLSYVG 527 (625)
Q Consensus 515 ~v~~~~L~~~~i~ 527 (625)
++++++++.+|+.
T Consensus 249 ~v~~~~~~~~~~~ 261 (262)
T cd07395 249 KVTEDKIVHEYYS 261 (262)
T ss_pred EECCCceeeeeee
Confidence 9999999999883
No 7
>KOG2679 consensus Purple (tartrate-resistant) acid phosphatase [Posttranslational modification, protein turnover, chaperones]
Probab=99.94 E-value=1e-25 Score=221.50 Aligned_cols=272 Identities=17% Similarity=0.250 Sum_probs=172.6
Q ss_pred EEEEcCCCCCCcceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHH-HHH
Q 006938 200 HSFVSRNEDSNETIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDE-FFA 278 (625)
Q Consensus 200 ~~F~T~p~~~~~~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~-f~~ 278 (625)
-++.-++.++..++|+++||+|....++ |...+..+..|.+ +.++||||.+||++|+.|.....|. |-+
T Consensus 32 p~l~~p~~~dgslsflvvGDwGr~g~~n-----qs~va~qmg~ige-----~l~idfvlS~GDNfYd~G~~~~~Dp~Fq~ 101 (336)
T KOG2679|consen 32 PRLYDPAKSDGSLSFLVVGDWGRRGSFN-----QSQVALQMGEIGE-----KLDIDFVLSTGDNFYDTGLTSENDPRFQD 101 (336)
T ss_pred hhhcCCCCCCCceEEEEEcccccCCchh-----HHHHHHHHHhHHH-----hccceEEEecCCcccccCCCCCCChhHHh
Confidence 3455555555678999999999776543 3444444444432 2478999999999999986444442 222
Q ss_pred hHHHh----hcCCceEEccCCCCCCCCCCCCCCCCCCCccCCCCCCccccccccccccCCCCCCCCCCCCCCCCCceEE-
Q 006938 279 LIEPV----ASRVAYHVCIGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKFHMPGNSLEPTGTRAPATRNLYYS- 353 (625)
Q Consensus 279 ~l~~~----~~~iP~~~v~GNHD~~~~~~~~~~~~~~~~Y~~d~gge~~~~y~~~f~~P~~~~~~~G~~~~~~~~~yYs- 353 (625)
.++.+ ..+.||+.+.||||+.++..+ ..+. +|. ....||..|.. ||-
T Consensus 102 sF~nIYT~pSLQkpWy~vlGNHDyrGnV~A---Qls~-~l~---------~~d~RW~c~rs---------------f~~~ 153 (336)
T KOG2679|consen 102 SFENIYTAPSLQKPWYSVLGNHDYRGNVEA---QLSP-VLR---------KIDKRWICPRS---------------FYVD 153 (336)
T ss_pred hhhhcccCcccccchhhhccCccccCchhh---hhhH-HHH---------hhccceecccH---------------Hhhc
Confidence 23322 246799999999999865311 1110 011 12234443321 110
Q ss_pred -----EEeCcEEEEEEeCCcc-------cC---C----ChHHHHHHHHHhhccccCCCCeEEEEcccCCccCCCCCCChh
Q 006938 354 -----FDMGVVHFVYISTETN-------FL---Q----GSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAP 414 (625)
Q Consensus 354 -----fd~G~v~fI~LDT~~~-------~~---~----~~~Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~~~d~~ 414 (625)
+..-++.++++|+-.. +. + -..|+.||+..|++ +.++|+||++|||+.+.+.|+.
T Consensus 154 ae~ve~f~v~~~~f~~d~~~~~~~~~ydw~~v~PR~~~~~~~l~~le~~L~~---S~a~wkiVvGHh~i~S~~~HG~--- 227 (336)
T KOG2679|consen 154 AEIVEMFFVDTTPFMDDTFTLCTDDVYDWRGVLPRVKYLRALLSWLEVALKA---SRAKWKIVVGHHPIKSAGHHGP--- 227 (336)
T ss_pred ceeeeeeccccccchhhheecccccccccccCChHHHHHHHHHHHHHHHHHH---hhcceEEEecccceehhhccCC---
Confidence 0011233334333211 10 0 25788999999998 7889999999999999887764
Q ss_pred hhHHHHHHHHHHHHHcCceEEEEcCccCceeeeccCCccccCCCCCCCCCCCCcE-EEEECCCCCCCCCCCCCCCCCCCC
Q 006938 415 LRNRMLEHLEPLFVENNVTLALWGHVHRYERFCPLNNFTCGSMGMDGEPSEAFPV-HIVIGMAGQDWQPIWQPRPDHPDD 493 (625)
Q Consensus 415 ~~~~~~~~l~~l~~ky~VdlvlsGH~H~yeR~~p~~~~~~~~~~~~~~~~~~g~v-yIv~G~gG~~~~~~~~~~~~~~~~ 493 (625)
..++.++|.|||++++||++++||+|+.|...- ++.++ |+++|+|...+.. ..+..
T Consensus 228 -T~eL~~~LlPiL~~n~VdlY~nGHDHcLQhis~----------------~e~~iqf~tSGagSkaw~g-----~~~~~- 284 (336)
T KOG2679|consen 228 -TKELEKQLLPILEANGVDLYINGHDHCLQHISS----------------PESGIQFVTSGAGSKAWRG-----TDHNP- 284 (336)
T ss_pred -hHHHHHHHHHHHHhcCCcEEEecchhhhhhccC----------------CCCCeeEEeeCCcccccCC-----CccCC-
Confidence 367889999999999999999999999997641 23444 5555544433321 11110
Q ss_pred CCCCCCCccceeeCcccEEEEEEeCCEEEEEEEECCCCcEEEEEEEEe
Q 006938 494 PVFPQPMRSLYRGGEFGYTRLVATKEKLTLSYVGNHDGEVHDMVEILA 541 (625)
Q Consensus 494 ~~~~~p~ws~~~~~~~Gy~~v~v~~~~L~~~~i~~~dG~v~D~f~I~k 541 (625)
.-.|....|.-...||+.++++...+++.|+. ..|+++.+-...|
T Consensus 285 --~~~p~~lkF~YdgqGfmsv~is~~e~~vvfyD-~~G~~Lhk~~t~k 329 (336)
T KOG2679|consen 285 --EVNPKELKFYYDGQGFMSVEISHSEARVVFYD-VSGKVLHKWSTSK 329 (336)
T ss_pred --ccChhheEEeeCCCceEEEEEecceeEEEEEe-ccCceEEEeeccc
Confidence 01233345555667999999999999999995 6788887755433
No 8
>PF09423 PhoD: PhoD-like phosphatase; InterPro: IPR018946 This entry contains a number of putative proteins as well as Alkaline phosphatase D which catalyses the reaction: A phosphate monoester + H(2)O = an alcohol + phosphate ; PDB: 2YEQ_B.
Probab=99.91 E-value=9.9e-23 Score=225.46 Aligned_cols=367 Identities=16% Similarity=0.208 Sum_probs=169.1
Q ss_pred EEecCCCCceEEEEEecCC-----------CceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEEE
Q 006938 106 LGFTEDASEMRVMFLAEDG-----------EKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFDA 174 (625)
Q Consensus 106 L~~~~~~~~~~V~W~T~~~-----------~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~a 174 (625)
++.|+...+-.|.|..-.+ ....|++.+.+.....+..+...+- .+.++++++
T Consensus 3 vasGdp~~~svilWtR~~~~~~~~~~~~~~~~V~~~va~d~~~~~~~~~~~~~~~----------------~~~d~t~~v 66 (453)
T PF09423_consen 3 VASGDPTPDSVILWTRVTPPAAAGGMPKAPVPVRWEVATDPEFSNVVRSGTVTTT----------------AERDFTVKV 66 (453)
T ss_dssp EEEE---SS-EEEEEE--SBGGTB---SS-EEEEEEEESSTTSSSEEEEEEEEE-----------------GGGTTEEEE
T ss_pred ccccCCCCCEEEEEEEecCcccCCCCCCCcEEEEEEEECCCCccceEEecceecc----------------cCCCeEeec
Confidence 5677766777788864433 2344555555443322222222111 124689999
Q ss_pred EEcCCCCCcEEEEEEecCC-CCcceeEEEEcCCCCC-CcceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCC
Q 006938 175 VIKGLKKGVRYYYKVGSDS-KGWSETHSFVSRNEDS-NETIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGD 252 (625)
Q Consensus 175 ~ltgL~PgT~Y~YrV~~~~-~~~S~~~~F~T~p~~~-~~~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~ 252 (625)
.++||+|+|+|+||+..++ ...|.+++|+|+|... ..++|+++++.+....+ ...+. .+.+ ..
T Consensus 67 ~v~gL~p~t~Y~Y~~~~~~~~~~s~~g~~rT~p~~~~~~~r~a~~SC~~~~~~~----------~~~~~----~~a~-~~ 131 (453)
T PF09423_consen 67 DVTGLQPGTRYYYRFVVDGGGQTSPVGRFRTAPDGDPDPFRFAFGSCQNYEDGY----------FPAYR----RIAE-RD 131 (453)
T ss_dssp EE-S--TT-EEEEEEEE--TTEE---EEEE--TT-----EEEEEE----CCC-------------HHHH----HHTT--S
T ss_pred ccCCCCCCceEEEEEEEecCCCCCCceEEEcCCCCCCCceEEEEECCCCcccCh----------HHHHH----hhhc-cC
Confidence 9999999999999999853 4678899999997653 35888888876553221 12223 3321 14
Q ss_pred CCcEEEEcCccccCCCc--------------------h-------hhHHHH--HHhHHHhhcCCceEEccCCCCCCCCCC
Q 006938 253 KPAFVSHIGDISYARGY--------------------S-------WLWDEF--FALIEPVASRVAYHVCIGNHEYDWPLQ 303 (625)
Q Consensus 253 ~pdfvl~~GDivy~~g~--------------------~-------~~wd~f--~~~l~~~~~~iP~~~v~GNHD~~~~~~ 303 (625)
+|||+||+||++|.+.. . ..|..+ ...++.+.+.+|+++++.+||+..+..
T Consensus 132 ~~D~~l~lGD~IY~d~~~~~~~~~~~~~~r~~~p~~~~~~l~~yR~~y~~~~~~p~l~~~~~~~P~~~iwDDHdi~nn~~ 211 (453)
T PF09423_consen 132 DPDFVLHLGDQIYEDGGGGYGNLSRRPIGRAPEPAHEAETLDDYRRRYRQYRSDPDLRRLHANVPWIMIWDDHDIGNNWW 211 (453)
T ss_dssp --SEEEE-S-SS----TTSS--TT---S-----SSSS--SHHHHHHHHHHHHT-HHHHHHHHHSEEEE---STTTSTT-B
T ss_pred CCcEEEEeCCeeeccCCcccccccccccccccccccccccHHHHHHHHHHHcCCHHHHHHhhcccEEEEccCceeccccc
Confidence 89999999999998842 0 112222 234566788999999999999963210
Q ss_pred CCCCCCCCCc-cCCCCCCc----cccccccccc-cCCCCCCCCCCCCCCCCCceEEEEeCc-EEEEEEeCCcccC-----
Q 006938 304 PWKPDWSYTV-YGTDGGGE----CGVPYSLKFH-MPGNSLEPTGTRAPATRNLYYSFDMGV-VHFVYISTETNFL----- 371 (625)
Q Consensus 304 ~~~~~~~~~~-Y~~d~gge----~~~~y~~~f~-~P~~~~~~~G~~~~~~~~~yYsfd~G~-v~fI~LDT~~~~~----- 371 (625)
.... ......+. ...++...+. +|.....+.+ .....|++|.+|+ +.|++||+.....
T Consensus 212 ------~~~~~~~~~~~~~~~~~~~~a~~ay~e~~p~r~~~~~~----~~~~~y~~~~~G~~~~~~~LD~R~~R~~~~~~ 281 (453)
T PF09423_consen 212 ------GDGAENHQDTSGDFQDRRRAAYQAYFEYQPVRNPDPPG----DQGRIYRSFRYGDLVEFFMLDTRSYRSPPPCD 281 (453)
T ss_dssp ------TTB-STT---HHHHHHHHHHHHHHHHHHS---GGG-BT----TB----EEEEETTTEEEEE--SSSS----CCC
T ss_pred ------CCccccccccccchHHHHHHHHHHHHhhcCccCCCccC----CCCceEEEEecCCceeEEEEechhcccccccc
Confidence 0000 00000000 0011222221 3432110001 1245799999999 9999999874221
Q ss_pred ----------------CChHHHHHHHHHhhccccCCCCeEEEEcccCCccCCCC---------CCChhhhHHHHHHHHHH
Q 006938 372 ----------------QGSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNE---------NRDAPLRNRMLEHLEPL 426 (625)
Q Consensus 372 ----------------~~~~Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~---------~~d~~~~~~~~~~l~~l 426 (625)
.|.+|++||++.|++ +.++|+||+.-.|+...... .+.+......|++|..+
T Consensus 282 ~~~~~~~~~~~~~~~mLG~~Q~~wL~~~L~~---s~a~~kvi~s~v~~~~~~~~~~~~~~~~~~d~W~g~~~er~~Ll~~ 358 (453)
T PF09423_consen 282 GPGDTCPAADDPSRTMLGEEQWDWLEDWLAS---SQATWKVIGSSVPFSPLNFPDAAEGLPFNMDSWDGYPAERQRLLDF 358 (453)
T ss_dssp SSEE--HHHH-TT--SS-HHHHHHHHHHHHH-----SSEEEEE-SS--S---SS-SS-S--EETTSGGGSHHHHHHHHHH
T ss_pred ccccccccccCCccCcCCHHHHHHHHHHHhc---CCCcEEEEEeCCceecccccccccccccCCCchhhCHHHHHHHHHH
Confidence 268999999999997 55899999998887654322 23345556678999999
Q ss_pred HHHcCce--EEEEcCccCceeeeccCCccccCCCCCCCCCCCCc-EEEEECCCCCCCCCC-CCCCCCCCCCCCCCCCCcc
Q 006938 427 FVENNVT--LALWGHVHRYERFCPLNNFTCGSMGMDGEPSEAFP-VHIVIGMAGQDWQPI-WQPRPDHPDDPVFPQPMRS 502 (625)
Q Consensus 427 ~~ky~Vd--lvlsGH~H~yeR~~p~~~~~~~~~~~~~~~~~~g~-vyIv~G~gG~~~~~~-~~~~~~~~~~~~~~~p~ws 502 (625)
|.+.++. ++|+|++|.........+..-.... ...+ +-+++++=.+..... ..+. .... .....++.
T Consensus 359 l~~~~~~~vV~LSGDvH~~~~~~~~~~~~~~~~~------~~~~~~Ef~~s~vts~~~~~~~~~~--~~~~-~~~~np~~ 429 (453)
T PF09423_consen 359 LRESGIRNVVFLSGDVHASAASRIPPDDADPPDG------PGSVGVEFTSSSVTSPGFGLGTSPA--LDRA-LDKANPHL 429 (453)
T ss_dssp HHHTT---EEEEE-SSSSEEEEEEESSTT---TT------S-EEEEEEE---SSTT-S-BSB-TT--HHH--HHHH-TTE
T ss_pred HHhhCCCCEEEEecCcchheeeecccccccccCC------CCCeEEEEECCCccCCCcccccchh--hhhh-hhhcCCce
Confidence 9988875 7899999997665432221100000 0112 233333211111000 0000 0000 00112344
Q ss_pred cee-eCcccEEEEEEeCCEEEEEE
Q 006938 503 LYR-GGEFGYTRLVATKEKLTLSY 525 (625)
Q Consensus 503 ~~~-~~~~Gy~~v~v~~~~L~~~~ 525 (625)
.|. ...+||+.|++++++++++|
T Consensus 430 ~~~~~~~~G~~~i~~~~~~~~~~~ 453 (453)
T PF09423_consen 430 KFADLRNFGYVEIDITPERVTAEW 453 (453)
T ss_dssp EEEE-B-EEEEEEEEETTEEEEEE
T ss_pred EEeECCCCcEEEEEEccceEEEEC
Confidence 444 47899999999999999876
No 9
>COG3540 PhoD Phosphodiesterase/alkaline phosphatase D [Inorganic ion transport and metabolism]
Probab=99.89 E-value=9.4e-23 Score=214.89 Aligned_cols=301 Identities=17% Similarity=0.216 Sum_probs=205.5
Q ss_pred CCc-eeEEEEecCCCCceEEEEEecC--------CCceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCc
Q 006938 99 TGP-RAGALGFTEDASEMRVMFLAED--------GEKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPG 169 (625)
Q Consensus 99 ~~P-~qv~L~~~~~~~~~~V~W~T~~--------~~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~ 169 (625)
.-| .+.-++.++....-.|.|..-+ ++...+||+++++..+.+..++..+- ...+
T Consensus 35 ~rpaF~~GVaSGDp~~~svviWTRl~P~p~~~g~~v~V~wEvs~~~~f~~ivr~gt~~a~----------------p~~d 98 (522)
T COG3540 35 GRPAFTHGVASGDPTATSVVIWTRLDPEPLNGGRPVPVIWEVSTDENFSNIVRKGTVIAS----------------PELD 98 (522)
T ss_pred CCCccccccccCCCCCCeEEEEEccCCccccCCCCcceEEEecCCccHHHHHhcCCccCC----------------cccC
Confidence 346 7888888888788889998665 56678999988875433322222111 1246
Q ss_pred eEEEEEEcCCCCCcEEEEEEecCCCCcceeEEEEcCCCCCCcceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHH
Q 006938 170 WIFDAVIKGLKKGVRYYYKVGSDSKGWSETHSFVSRNEDSNETIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEA 249 (625)
Q Consensus 170 ~~h~a~ltgL~PgT~Y~YrV~~~~~~~S~~~~F~T~p~~~~~~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~ 249 (625)
+.+++.++||+|++.|+||+...+ ..|.+++|+|+|..+...+++.|||..|......+ .. +.+.|.
T Consensus 99 htv~v~~~gL~P~~~yfYRf~~~~-~~spvGrtrTapa~~~~i~~~~fa~ascQ~~~~gy-------~~----aY~~ma- 165 (522)
T COG3540 99 HTVHVDLRGLSPDQDYFYRFKAGD-ERSPVGRTRTAPAPGRAIRFVWFADASCQGWEIGY-------MT----AYKTMA- 165 (522)
T ss_pred ceEEEeccCCCCCceEEEEEeeCC-ccccccccccCCCCCCcchhhhhhhccccccccch-------hH----HHHHHH-
Confidence 889999999999999999999864 67899999999998888999999999887643211 11 233343
Q ss_pred hCCCCcEEEEcCccccCCCch-----------------------------hhHHHH--HHhHHHhhcCCceEEccCCCCC
Q 006938 250 LGDKPAFVSHIGDISYARGYS-----------------------------WLWDEF--FALIEPVASRVAYHVCIGNHEY 298 (625)
Q Consensus 250 ~~~~pdfvl~~GDivy~~g~~-----------------------------~~wd~f--~~~l~~~~~~iP~~~v~GNHD~ 298 (625)
+.+|||+||.||.+|+.+.. .+|..+ .+.++...+..||++.+.+||.
T Consensus 166 -~~~~D~viH~GDyIYeyg~~~~~~~~~~~~~~~~~~~~~~ei~TLddYR~rya~y~~D~nLqaahA~~Pwi~~WDDHEv 244 (522)
T COG3540 166 -KEEPDFVIHLGDYIYEYGPIPDEVSLNSWKNVVVTQHKSKEIETLDDYRGRYAYYKTDENLQAAHAAFPWIVQWDDHEV 244 (522)
T ss_pred -hcCCCEEEEcCCeeeccCCcccccccccccccccCCCCCcceeeHHHHhhHHhhhcccHHHHHhhccCCEEEEeccccc
Confidence 35799999999999987521 122222 2345667789999999999999
Q ss_pred CCCCCCCCCCCCCCccCCCC-CCc------ccccccccc-ccCCCCCCCCCCCCCCCCCceEEEEeCc-EEEEEEeCCcc
Q 006938 299 DWPLQPWKPDWSYTVYGTDG-GGE------CGVPYSLKF-HMPGNSLEPTGTRAPATRNLYYSFDMGV-VHFVYISTETN 369 (625)
Q Consensus 299 ~~~~~~~~~~~~~~~Y~~d~-gge------~~~~y~~~f-~~P~~~~~~~G~~~~~~~~~yYsfd~G~-v~fI~LDT~~~ 369 (625)
.++ |.+..-..|+ -.+ ...+++.++ .||...... |.....|.+|.||+ ..|.+||+..+
T Consensus 245 ~NN-------~~~~~~~nD~~~~~k~~~~r~a~A~qAyyE~mPiR~~~~-----p~~~~lYR~~tyG~La~~~~LDtR~Y 312 (522)
T COG3540 245 ANN-------WSNSIDENDSRYDEKDFVLRAAAARQAYYEHMPIRYSSL-----PTDGRLYRSFTYGPLADLFVLDTRSY 312 (522)
T ss_pred ccc-------ccccccccCCCCChHHHHHHHHHHHHHHHHhCccccccC-----Cccceeeeeeccccccceeeeehhhh
Confidence 753 2221111111 011 112233333 367543210 11346899999999 67999999743
Q ss_pred cC----------------------CChHHHHHHHHHhhccccCCCCeEEEEcccCCccCCCCC-----------CChhhh
Q 006938 370 FL----------------------QGSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNEN-----------RDAPLR 416 (625)
Q Consensus 370 ~~----------------------~~~~Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~~-----------~d~~~~ 416 (625)
.. .|+.|.+||+..|.+ +++.|+|+....|+-...... +.++..
T Consensus 313 R~dqp~~dg~~~~~q~~~~~~~~mlG~~QeqWLk~~L~~---SkatWnVia~q~~~~~~~~d~~~a~~~~~a~~D~wdGy 389 (522)
T COG3540 313 RTDQPCGDGNPPNCQAVAGSAATMLGEQQEQWLKRGLGA---SKATWNVIAQQMPLGLVVFDGSPATEGQEANADGWDGY 389 (522)
T ss_pred ccccccCCCCcchhhhhhCccccchhhHHHHHHHhhhhh---cchhhhhhhhhcceeEeecCCCccccCccccccCcCCC
Confidence 31 268999999999998 789999999988874221111 112233
Q ss_pred HHHHHHHHHHHHHcCce--EEEEcCccCce
Q 006938 417 NRMLEHLEPLFVENNVT--LALWGHVHRYE 444 (625)
Q Consensus 417 ~~~~~~l~~l~~ky~Vd--lvlsGH~H~ye 444 (625)
..-|+.|...+...++. ++|+|++|..-
T Consensus 390 ~~~RerLl~fi~~~~~~N~V~LtgDvH~~w 419 (522)
T COG3540 390 PAGRERLLRFIADRKIRNTVVLTGDVHYSW 419 (522)
T ss_pred cccHHHHHHHHHhcCCCCcEEEechhHHHH
Confidence 44588999999998876 89999999743
No 10
>cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain. GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa
Probab=99.88 E-value=1.5e-21 Score=197.45 Aligned_cols=209 Identities=17% Similarity=0.177 Sum_probs=142.6
Q ss_pred eEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhcCCceEEc
Q 006938 213 IAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASRVAYHVC 292 (625)
Q Consensus 213 ~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~~iP~~~v 292 (625)
||++++|.|.+...... .........++.+++.+++...+|||||++||+++... ...|+.+.+.++.+ .+|++.+
T Consensus 1 r~~~iSDlH~~~~~~~~-~~~~~~~~~l~~~~~~i~~~~~~~d~vi~~GDl~~~~~-~~~~~~~~~~l~~~--~~p~~~v 76 (240)
T cd07402 1 LLAQISDLHLRADGEGA-LLGVDTAASLEAVLAHINALHPRPDLVLVTGDLTDDGS-PESYERLRELLAAL--PIPVYLL 76 (240)
T ss_pred CEEEEeCCccCCCCcce-ecCcCHHHHHHHHHHHHHhcCCCCCEEEECccCCCCCC-HHHHHHHHHHHhhc--CCCEEEe
Confidence 58999999987532100 00112345677788877765569999999999997643 44566666666554 8999999
Q ss_pred cCCCCCCCCCCCCCCCCCCCccCCCCCCccccccccccccCCCCCCCCCCCCCCCCCceEEEEeCcEEEEEEeCCccc--
Q 006938 293 IGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKFHMPGNSLEPTGTRAPATRNLYYSFDMGVVHFVYISTETNF-- 370 (625)
Q Consensus 293 ~GNHD~~~~~~~~~~~~~~~~Y~~d~gge~~~~y~~~f~~P~~~~~~~G~~~~~~~~~yYsfd~G~v~fI~LDT~~~~-- 370 (625)
+||||.... +...|..... .....+|+|+.++++||+||+....
T Consensus 77 ~GNHD~~~~------------------------~~~~~~~~~~----------~~~~~~~~~~~~~~~~i~lds~~~~~~ 122 (240)
T cd07402 77 PGNHDDRAA------------------------MRAVFPELPP----------APGFVQYVVDLGGWRLILLDSSVPGQH 122 (240)
T ss_pred CCCCCCHHH------------------------HHHhhccccc----------cccccceeEecCCEEEEEEeCCCCCCc
Confidence 999997411 1111110000 0134688999999999999986421
Q ss_pred --CCChHHHHHHHHHhhccccCCCCeEEEEcccCCccCCCCCCChhhhHHHHHHHHHHHHHc-CceEEEEcCccCceeee
Q 006938 371 --LQGSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVEN-NVTLALWGHVHRYERFC 447 (625)
Q Consensus 371 --~~~~~Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~~~d~~~~~~~~~~l~~l~~ky-~VdlvlsGH~H~yeR~~ 447 (625)
....+|++||++.|++.. ..++|+++|+|++.......+. .....++.+.+++.++ +|+++|+||.|......
T Consensus 123 ~~~~~~~ql~wL~~~L~~~~---~~~~il~~H~pp~~~~~~~~~~-~~~~~~~~~~~~l~~~~~v~~v~~GH~H~~~~~~ 198 (240)
T cd07402 123 GGELCAAQLDWLEAALAEAP---DKPTLVFLHHPPFPVGIAWMDA-IGLRNAEALAAVLARHPNVRAILCGHVHRPIDGS 198 (240)
T ss_pred CCEECHHHHHHHHHHHHhCC---CCCEEEEECCCCccCCchhhhh-hhCCCHHHHHHHHhcCCCeeEEEECCcCchHHeE
Confidence 135789999999999854 3458899999987654311111 1112267899999999 99999999999976543
Q ss_pred ccCCccccCCCCCCCCCCCCcEEEEECCCCCCC
Q 006938 448 PLNNFTCGSMGMDGEPSEAFPVHIVIGMAGQDW 480 (625)
Q Consensus 448 p~~~~~~~~~~~~~~~~~~g~vyIv~G~gG~~~ 480 (625)
.+++.++++|+.|..+
T Consensus 199 -----------------~~g~~~~~~gs~~~~~ 214 (240)
T cd07402 199 -----------------WGGIPLLTAPSTCHQF 214 (240)
T ss_pred -----------------ECCEEEEEcCcceeee
Confidence 2667788888877754
No 11
>cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain. Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=99.88 E-value=3e-21 Score=199.14 Aligned_cols=209 Identities=18% Similarity=0.199 Sum_probs=136.4
Q ss_pred ceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCch--hhHHHHHHhHHHhhcCCce
Q 006938 212 TIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYS--WLWDEFFALIEPVASRVAY 289 (625)
Q Consensus 212 ~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~--~~wd~f~~~l~~~~~~iP~ 289 (625)
++|++++|+|.......-......+...++.+++.+++ .+|||||++||+++.+... ..|+.+.+.+..+ .+|+
T Consensus 1 ~r~~~iSD~H~~~~~~~~~~~~~~~~~~l~~~i~~i~~--~~~d~vv~~GDlv~~~~~~~~~~~~~~~~~l~~l--~~p~ 76 (267)
T cd07396 1 FRFGIIADIQYADEDDTRPRYYRNSLEKLEEAVEEWNR--ESLDFVVQLGDIIDGDNARAEEALDAVLAILDRL--KGPV 76 (267)
T ss_pred CeEEEEeccccccCCCcccchHHHhHHHHHHHHHHHHc--CCCCEEEECCCeecCCCchHHHHHHHHHHHHHhc--CCCE
Confidence 58999999995542211011112344566667777654 4699999999999755421 3455555444433 5899
Q ss_pred EEccCCCCCCCCCCCCCCCCCCCccCCCCCCccccccccccccCCCCCCCCCCCCCCCCCceEEEEeCcEEEEEEeCCcc
Q 006938 290 HVCIGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKFHMPGNSLEPTGTRAPATRNLYYSFDMGVVHFVYISTETN 369 (625)
Q Consensus 290 ~~v~GNHD~~~~~~~~~~~~~~~~Y~~d~gge~~~~y~~~f~~P~~~~~~~G~~~~~~~~~yYsfd~G~v~fI~LDT~~~ 369 (625)
++++||||...... .+.. +.... ..+..||+|++++++||+||+...
T Consensus 77 ~~v~GNHD~~~~~~---------------------~~~~-~~~~~-----------~~~~~yysf~~~~~~~i~lds~~~ 123 (267)
T cd07396 77 HHVLGNHDLYNPSR---------------------EYLL-LYTLL-----------GLGAPYYSFSPGGIRFIVLDGYDI 123 (267)
T ss_pred EEecCccccccccH---------------------hhhh-ccccc-----------CCCCceEEEecCCcEEEEEeCCcc
Confidence 99999999863210 0000 00000 123469999999999999998521
Q ss_pred ----------------------------------cCCChHHHHHHHHHhhccccCCCCeEEEEcccCCccCCCCCCChhh
Q 006938 370 ----------------------------------FLQGSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAPL 415 (625)
Q Consensus 370 ----------------------------------~~~~~~Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~~~d~~~ 415 (625)
-....+|++||+++|+++..+ ..++||++|+|++...... ..
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~~Ql~WL~~~L~~~~~~-~~~viV~~Hhp~~~~~~~~-~~-- 199 (267)
T cd07396 124 SALGRPEDTPKAENADDNSNLGLYLSEPRFVDWNGGIGEEQLQWLRNELQEADAN-GEKVIIFSHFPLHPESTSP-HG-- 199 (267)
T ss_pred ccccCCCCChhhhhHHHhchhhhhccCccceeccCcCCHHHHHHHHHHHHHHHhc-CCeEEEEEeccCCCCCCCc-cc--
Confidence 012479999999999986432 3458999999997654311 11
Q ss_pred hHHHHHHHHHHHHHc-CceEEEEcCccCceeeeccCCccccCCCCCCCCCCCCcEEEEECCCCC
Q 006938 416 RNRMLEHLEPLFVEN-NVTLALWGHVHRYERFCPLNNFTCGSMGMDGEPSEAFPVHIVIGMAGQ 478 (625)
Q Consensus 416 ~~~~~~~l~~l~~ky-~VdlvlsGH~H~yeR~~p~~~~~~~~~~~~~~~~~~g~vyIv~G~gG~ 478 (625)
....++.+.+++.++ +|+++|+||+|.++... .+|+.|+++|+-..
T Consensus 200 ~~~~~~~~~~ll~~~~~V~~v~~GH~H~~~~~~-----------------~~gi~~~~~~a~~~ 246 (267)
T cd07396 200 LLWNHEEVLSILRAYGCVKACISGHDHEGGYAQ-----------------RHGIHFLTLEGMVE 246 (267)
T ss_pred cccCHHHHHHHHHhCCCEEEEEcCCcCCCCccc-----------------cCCeeEEEechhhc
Confidence 111256788999996 89999999999987442 26777888875443
No 12
>PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional
Probab=99.84 E-value=2.7e-19 Score=185.42 Aligned_cols=250 Identities=13% Similarity=0.064 Sum_probs=150.4
Q ss_pred EEcCCCCCCcceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHH
Q 006938 202 FVSRNEDSNETIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIE 281 (625)
Q Consensus 202 F~T~p~~~~~~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~ 281 (625)
.+|.+...++++|+.++|+|........ .........++.+++.+++...+|||||++||++... ....++.+.+.++
T Consensus 5 ~~~~~~~~~~~~i~~iSD~Hl~~~~~~~-~~~~~~~~~l~~~i~~i~~~~~~~D~vvitGDl~~~~-~~~~~~~~~~~l~ 82 (275)
T PRK11148 5 LTLPLAGEARVRILQITDTHLFADEHET-LLGVNTWESYQAVLEAIRAQQHEFDLIVATGDLAQDH-SSEAYQHFAEGIA 82 (275)
T ss_pred cccccCCCCCEEEEEEcCcccCCCCCCc-eeccCHHHHHHHHHHHHHhhCCCCCEEEECCCCCCCC-CHHHHHHHHHHHh
Confidence 4555555677999999999974321100 0011234567777877776667899999999999754 3456666766665
Q ss_pred HhhcCCceEEccCCCCCCCCCCCCCCCCCCCccCCCCCCccccccccccccCCCCCCCCCCCCCCCCCceEEEEeCcEEE
Q 006938 282 PVASRVAYHVCIGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKFHMPGNSLEPTGTRAPATRNLYYSFDMGVVHF 361 (625)
Q Consensus 282 ~~~~~iP~~~v~GNHD~~~~~~~~~~~~~~~~Y~~d~gge~~~~y~~~f~~P~~~~~~~G~~~~~~~~~yYsfd~G~v~f 361 (625)
.+ .+|+++++||||.... +...+. .. + ....++.+..++++|
T Consensus 83 ~l--~~Pv~~v~GNHD~~~~------------------------~~~~~~--~~-----~-----~~~~~~~~~~~~~~~ 124 (275)
T PRK11148 83 PL--RKPCVWLPGNHDFQPA------------------------MYSALQ--DA-----G-----ISPAKHVLIGEHWQI 124 (275)
T ss_pred hc--CCcEEEeCCCCCChHH------------------------HHHHHh--hc-----C-----CCccceEEecCCEEE
Confidence 54 6899999999998421 111111 00 0 011233344556999
Q ss_pred EEEeCCccc----CCChHHHHHHHHHhhccccCCCCeEEEEcccCCccCCCCCCChhhhHHHHHHHHHHHHHc-CceEEE
Q 006938 362 VYISTETNF----LQGSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVEN-NVTLAL 436 (625)
Q Consensus 362 I~LDT~~~~----~~~~~Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~~~d~~~~~~~~~~l~~l~~ky-~Vdlvl 436 (625)
|+|||...- ..+.+|++||+++|++.. + +.+||++|||+........+. ......++|.+++++| +|+++|
T Consensus 125 i~Lds~~~g~~~G~l~~~ql~wL~~~L~~~~-~--~~~vv~~hH~P~~~~~~~~d~-~~l~n~~~l~~ll~~~~~v~~vl 200 (275)
T PRK11148 125 LLLDSQVFGVPHGELSEYQLEWLERKLADAP-E--RHTLVLLHHHPLPAGCAWLDQ-HSLRNAHELAEVLAKFPNVKAIL 200 (275)
T ss_pred EEecCCCCCCcCCEeCHHHHHHHHHHHhhCC-C--CCeEEEEcCCCCCCCcchhhc-cCCCCHHHHHHHHhcCCCceEEE
Confidence 999986321 235899999999998853 2 224555555443322211110 0111246899999998 899999
Q ss_pred EcCccCceeeeccCCccccCCCCCCCCCCCCcEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCccceeeCcccEEEEEE
Q 006938 437 WGHVHRYERFCPLNNFTCGSMGMDGEPSEAFPVHIVIGMAGQDWQPIWQPRPDHPDDPVFPQPMRSLYRGGEFGYTRLVA 516 (625)
Q Consensus 437 sGH~H~yeR~~p~~~~~~~~~~~~~~~~~~g~vyIv~G~gG~~~~~~~~~~~~~~~~~~~~~p~ws~~~~~~~Gy~~v~v 516 (625)
+||+|...... .+|+.++++++.+..+.+. .... .......||..+++
T Consensus 201 ~GH~H~~~~~~-----------------~~gi~~~~~ps~~~q~~~~--------------~~~~-~~~~~~~g~~~~~l 248 (275)
T PRK11148 201 CGHIHQELDLD-----------------WNGRRLLATPSTCVQFKPH--------------CTNF-TLDTVAPGWRELEL 248 (275)
T ss_pred ecccChHHhce-----------------ECCEEEEEcCCCcCCcCCC--------------CCcc-ccccCCCcEEEEEE
Confidence 99999854321 2566677777665433211 0000 11123468999988
Q ss_pred e-CCEEEEEEEE
Q 006938 517 T-KEKLTLSYVG 527 (625)
Q Consensus 517 ~-~~~L~~~~i~ 527 (625)
+ ++.+..+.++
T Consensus 249 ~~~g~~~~~~~~ 260 (275)
T PRK11148 249 HADGSLETEVHR 260 (275)
T ss_pred cCCCcEEEEEEE
Confidence 5 4456666654
No 13
>cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain. YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for
Probab=99.81 E-value=1.6e-18 Score=172.99 Aligned_cols=161 Identities=20% Similarity=0.213 Sum_probs=115.4
Q ss_pred ceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhh-cCCceE
Q 006938 212 TIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVA-SRVAYH 290 (625)
Q Consensus 212 ~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~-~~iP~~ 290 (625)
++|++++|+|..... ........++++++.+++ .+||+|+++||+++......+|+.+.+.++.+. ..+|++
T Consensus 1 f~~~~~~D~q~~~~~-----~~~~~~~~~~~i~~~~~~--~~~d~iv~~GDl~~~~~~~~~~~~~~~~~~~l~~~~~p~~ 73 (214)
T cd07399 1 FTLAVLPDTQYYTES-----YPEVFDAQTDWIVDNAEA--LNIAFVLHLGDIVDDGDNDAEWEAADKAFARLDKAGIPYS 73 (214)
T ss_pred CEEEEecCCCcCCcC-----CHHHHHHHHHHHHHHHHH--cCCCEEEECCCccCCCCCHHHHHHHHHHHHHHHHcCCcEE
Confidence 589999999986431 112223455666666543 589999999999987655678998888888776 679999
Q ss_pred EccCCCCCCCCCCCCCCCCCCCccCCCCCCccccccccccccCCCCCCCCCCCCCCCCCceEEEEeCcEEEEEEeCCccc
Q 006938 291 VCIGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKFHMPGNSLEPTGTRAPATRNLYYSFDMGVVHFVYISTETNF 370 (625)
Q Consensus 291 ~v~GNHD~~~~~~~~~~~~~~~~Y~~d~gge~~~~y~~~f~~P~~~~~~~G~~~~~~~~~yYsfd~G~v~fI~LDT~~~~ 370 (625)
+++||||.. +.+|+.
T Consensus 74 ~~~GNHD~~--------------------------------------------------------------~~ld~~--- 88 (214)
T cd07399 74 VLAGNHDLV--------------------------------------------------------------LALEFG--- 88 (214)
T ss_pred EECCCCcch--------------------------------------------------------------hhCCCC---
Confidence 999999952 111111
Q ss_pred CCChHHHHHHHHHhhccccCCCCeEEEEcccCCccCCCCCCChh---hhHHHHHHHHHHHHHc-CceEEEEcCccCceee
Q 006938 371 LQGSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAP---LRNRMLEHLEPLFVEN-NVTLALWGHVHRYERF 446 (625)
Q Consensus 371 ~~~~~Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~~~d~~---~~~~~~~~l~~l~~ky-~VdlvlsGH~H~yeR~ 446 (625)
...+|++||++.|++.. ..++||++|+|++.......... ......+.|.+++++| +|+++|+||.|.+.+.
T Consensus 89 -~~~~ql~WL~~~L~~~~---~~~~iv~~H~p~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~V~~v~~GH~H~~~~~ 164 (214)
T cd07399 89 -PRDEVLQWANEVLKKHP---DRPAILTTHAYLNCDDSRPDSIDYDSDVNDGQQIWDKLVKKNDNVFMVLSGHVHGAGRT 164 (214)
T ss_pred -CCHHHHHHHHHHHHHCC---CCCEEEEecccccCCCCcCcccccccccccHHHHHHHHHhCCCCEEEEEccccCCCceE
Confidence 23789999999999743 23589999999987543222110 0122345788999999 7999999999999877
Q ss_pred ec
Q 006938 447 CP 448 (625)
Q Consensus 447 ~p 448 (625)
..
T Consensus 165 ~~ 166 (214)
T cd07399 165 TL 166 (214)
T ss_pred EE
Confidence 53
No 14
>cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain. TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=99.81 E-value=9.3e-19 Score=179.47 Aligned_cols=193 Identities=18% Similarity=0.270 Sum_probs=122.7
Q ss_pred EEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCC--------chhhHHHHHHhHHHhh-
Q 006938 214 AFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARG--------YSWLWDEFFALIEPVA- 284 (625)
Q Consensus 214 f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g--------~~~~wd~f~~~l~~~~- 284 (625)
|+.++|.|.+.... .......+.+++.+++ .+||+|+++||++.... ...+|+.|++.+....
T Consensus 2 ~~~iSDlH~g~~~~------~~~~~~~~~~~~~i~~--~~pd~i~~~GD~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (256)
T cd07401 2 FVHISDIHVSSFHP------PNRAQDETFCSNFIDV--IKPALVLATGDLTDNKTGNKLPSYQYQEEWQKYYNILKESSV 73 (256)
T ss_pred EEEecccccCCcCc------hhhhhHHHHHHHHHHh--hCCCEEEEccccccccccCCCcccccHHHHHHHHHHHHHhCC
Confidence 67899999875321 1111111334444544 48999999999986432 2457888888765543
Q ss_pred -cCCceEEccCCCCCCCCCCCCCCCCCCCccCCCCCCcccccccccc-ccCCCCCCCCCCCCCCCCCceEE--EEeCcEE
Q 006938 285 -SRVAYHVCIGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKF-HMPGNSLEPTGTRAPATRNLYYS--FDMGVVH 360 (625)
Q Consensus 285 -~~iP~~~v~GNHD~~~~~~~~~~~~~~~~Y~~d~gge~~~~y~~~f-~~P~~~~~~~G~~~~~~~~~yYs--fd~G~v~ 360 (625)
...|++.++||||+.+.. ..+. ...|..+| ..... ...+|. +..|+++
T Consensus 74 ~~~~p~~~v~GNHD~~~~~------------~~~~----~~~~~~~y~~~~~~------------~~~~~~~~~~~~~~~ 125 (256)
T cd07401 74 INKEKWFDIRGNHDLFNIP------------SLDS----ENNYYRKYSATGRD------------GSFSFSHTTRFGNYS 125 (256)
T ss_pred CCcceEEEeCCCCCcCCCC------------Cccc----hhhHHHHhheecCC------------CccceEEEecCCCEE
Confidence 268999999999995321 0000 00111112 11100 112333 3459999
Q ss_pred EEEEeCCcc----------cCCChHHHHHHHHHhhccccCCCCeEEEEcccCCccCCCCCCChhhhHHHHHHHHHHHHHc
Q 006938 361 FVYISTETN----------FLQGSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVEN 430 (625)
Q Consensus 361 fI~LDT~~~----------~~~~~~Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~~~d~~~~~~~~~~l~~l~~ky 430 (625)
||+|||... ....++|++||+++|++.. +.+++||++|+|++....... . ....+.++|+++
T Consensus 126 ~I~Ldt~~~~~~~~~~~~~g~l~~~ql~wL~~~L~~~~--~~~~~IV~~HhP~~~~~~~~~-----~-~~~~~~~ll~~~ 197 (256)
T cd07401 126 FIGVDPTLFPGPKRPFNFFGSLDKKLLDRLEKELEKST--NSNYTIWFGHYPTSTIISPSA-----K-SSSKFKDLLKKY 197 (256)
T ss_pred EEEEcCccCCCCCCCCceeccCCHHHHHHHHHHHHhcc--cCCeEEEEEcccchhccCCCc-----c-hhHHHHHHHHhc
Confidence 999999632 1134899999999998753 345799999999965332211 1 122389999999
Q ss_pred CceEEEEcCccCceeeeccC
Q 006938 431 NVTLALWGHVHRYERFCPLN 450 (625)
Q Consensus 431 ~VdlvlsGH~H~yeR~~p~~ 450 (625)
+|+++||||.|.+++..|+-
T Consensus 198 ~v~~vl~GH~H~~~~~~p~h 217 (256)
T cd07401 198 NVTAYLCGHLHPLGGLEPVH 217 (256)
T ss_pred CCcEEEeCCccCCCcceeee
Confidence 99999999999999866653
No 15
>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain. Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but
Probab=99.77 E-value=2.5e-18 Score=179.95 Aligned_cols=201 Identities=18% Similarity=0.236 Sum_probs=132.0
Q ss_pred EEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchh--------hHHHHHHhHHHhhcC
Q 006938 215 FLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSW--------LWDEFFALIEPVASR 286 (625)
Q Consensus 215 ~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~--------~wd~f~~~l~~~~~~ 286 (625)
.-+|+.+|..+ ...++.+++.+++...+|||||++||++..+.... .+..+++.++.....
T Consensus 41 ~~~G~~~CD~p-----------~~l~~s~l~~i~~~~~~~dfii~tGD~v~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 109 (296)
T cd00842 41 GPWGDYGCDSP-----------WRLVESALEAIKKNHPKPDFILWTGDLVRHDVDEQTPETLVLISISNLTSLLKKAFPD 109 (296)
T ss_pred CCCcCcCCCCc-----------HHHHHHHHHHHHHhCCCCCEEEEcCCCCCCCchhhchhHHHHHHHHHHHHHHHHhCCC
Confidence 34788888764 35677777777776679999999999998764321 244556667666788
Q ss_pred CceEEccCCCCCCCCCCCCCCCCCCCccCCCCCCccccccccccc--cCCCCCCCCCCCCCCCCCceEEEE-eCcEEEEE
Q 006938 287 VAYHVCIGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKFH--MPGNSLEPTGTRAPATRNLYYSFD-MGVVHFVY 363 (625)
Q Consensus 287 iP~~~v~GNHD~~~~~~~~~~~~~~~~Y~~d~gge~~~~y~~~f~--~P~~~~~~~G~~~~~~~~~yYsfd-~G~v~fI~ 363 (625)
+|+++++||||...... +.+. +... .....+...|. +|..... ....+.||++. .++++||+
T Consensus 110 ~pv~~~~GNHD~~p~~~-~~~~-----~~~~---~~~~~~~~~w~~~l~~~~~~------~~~~ggYY~~~~~~~l~vI~ 174 (296)
T cd00842 110 TPVYPALGNHDSYPVNQ-FPPN-----NSPS---WLYDALAELWKSWLPEEAEE------TFKKGGYYSVPVKPGLRVIS 174 (296)
T ss_pred CCEEEcCCCCCCCcccc-cCCc-----cccc---HHHHHHHHHHHhhcCHHHHH------HhhcceEEEEEcCCCeEEEE
Confidence 99999999999863221 1000 0000 00000111221 2211100 01134689998 88999999
Q ss_pred EeCCccc-----------CCChHHHHHHHHHhhccccCCCCeEEEEcccCCccCCCCCCChhhhHHHHHHHHHHHHHcC-
Q 006938 364 ISTETNF-----------LQGSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVENN- 431 (625)
Q Consensus 364 LDT~~~~-----------~~~~~Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~~~d~~~~~~~~~~l~~l~~ky~- 431 (625)
|||.... .....|++||+++|+++++.+ ..++|++|+|++....... ....++|.+|+++|.
T Consensus 175 Lnt~~~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~a~~~~-~~v~I~~HiPp~~~~~~~~-----~~~~~~~~~ii~~y~~ 248 (296)
T cd00842 175 LNTNLYYKKNFWLLGSNETDPAGQLQWLEDELQEAEQAG-EKVWIIGHIPPGVNSYDTL-----ENWSERYLQIINRYSD 248 (296)
T ss_pred EeCccccccChhhhccCCCCHHHHHHHHHHHHHHHHHCC-CeEEEEeccCCCCcccccc-----hHHHHHHHHHHHHHHH
Confidence 9996321 124789999999999875433 3478889999987543221 344678999999996
Q ss_pred -ceEEEEcCccCceeee
Q 006938 432 -VTLALWGHVHRYERFC 447 (625)
Q Consensus 432 -VdlvlsGH~H~yeR~~ 447 (625)
|.++|+||+|..+...
T Consensus 249 ~i~~~~~GH~H~d~~~~ 265 (296)
T cd00842 249 TIAGQFFGHTHRDEFRV 265 (296)
T ss_pred hhheeeecccccceEEE
Confidence 7789999999976553
No 16
>cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site
Probab=99.70 E-value=2.4e-16 Score=161.32 Aligned_cols=162 Identities=16% Similarity=0.155 Sum_probs=102.1
Q ss_pred CCCcEEEEcCccccCCC--chhhHHHHHHhHHHhh----cCCceEEccCCCCCCCCCCCCCCCCCCCccCCCCCCccccc
Q 006938 252 DKPAFVSHIGDISYARG--YSWLWDEFFALIEPVA----SRVAYHVCIGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVP 325 (625)
Q Consensus 252 ~~pdfvl~~GDivy~~g--~~~~wd~f~~~l~~~~----~~iP~~~v~GNHD~~~~~~~~~~~~~~~~Y~~d~gge~~~~ 325 (625)
.+||+||++||+++.+. ...+|.+.++.+..+. ..+|++.++||||+....... ......
T Consensus 44 l~PD~vv~lGDL~d~G~~~~~~~~~~~~~rf~~i~~~~~~~~pv~~VpGNHDig~~~~~~--------------~~~~~r 109 (257)
T cd08163 44 LKPDSTIFLGDLFDGGRDWADEYWKKEYNRFMRIFDPSPGRKMVESLPGNHDIGFGNGVV--------------LPVRQR 109 (257)
T ss_pred cCCCEEEEecccccCCeeCcHHHHHHHHHHHHHHhcCCCccceEEEeCCCcccCCCCCCC--------------HHHHHH
Confidence 58999999999987643 2345554344433332 247999999999985321000 000012
Q ss_pred cccccccCCCCCCCCCCCCCCCCCceEEEEeCcEEEEEEeCCcc-----cCCChHHHHHHHHHhhccccCCCCeEEEEcc
Q 006938 326 YSLKFHMPGNSLEPTGTRAPATRNLYYSFDMGVVHFVYISTETN-----FLQGSNQYNFIKHDLESVDRKKTPFVVVQGH 400 (625)
Q Consensus 326 y~~~f~~P~~~~~~~G~~~~~~~~~yYsfd~G~v~fI~LDT~~~-----~~~~~~Q~~WL~~~L~~~~r~~~~wiIV~~H 400 (625)
|.+.| +..+|+|++|+++||+|||... ......|.+||++.|+.... ..+ +||++|
T Consensus 110 f~~~F-----------------g~~~~~~~~~~~~fV~Lds~~l~~~~~~~~~~~~~~~l~~~l~~~~~-~~p-~ILl~H 170 (257)
T cd08163 110 FEKYF-----------------GPTSRVIDVGNHTFVILDTISLSNKDDPDVYQPPREFLHSFSAMKVK-SKP-RILLTH 170 (257)
T ss_pred HHHHh-----------------CCCceEEEECCEEEEEEccccccCCcccccchhHHHHHHhhhhccCC-CCc-EEEEec
Confidence 33334 1236889999999999999631 12346799999999986432 233 899999
Q ss_pred cCCccCCCCC------CCh------hh-hH-HH-HHHHHHHHHHcCceEEEEcCccCceee
Q 006938 401 RPMYTTSNEN------RDA------PL-RN-RM-LEHLEPLFVENNVTLALWGHVHRYERF 446 (625)
Q Consensus 401 ~P~y~~~~~~------~d~------~~-~~-~~-~~~l~~l~~ky~VdlvlsGH~H~yeR~ 446 (625)
+|+|...... ... .. .+ .+ .+.-..||.+.++.+||+||+|.|=..
T Consensus 171 ~Plyr~~~~~cg~~re~~~~~~~~~g~~yq~~l~~~~s~~il~~~~P~~vfsGhdH~~C~~ 231 (257)
T cd08163 171 VPLYRPPNTSCGPLRESKTPLPYGYGYQYQNLLEPSLSEVILKAVQPVIAFSGDDHDYCEV 231 (257)
T ss_pred cccccCCCCCCCCccccCCCCCCCCCccceeecCHHHHHHHHHhhCCcEEEecCCCcccee
Confidence 9999654210 000 00 00 01 234446778889999999999998554
No 17
>PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C ....
Probab=99.62 E-value=1.2e-15 Score=142.09 Aligned_cols=198 Identities=23% Similarity=0.248 Sum_probs=100.7
Q ss_pred ceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHH-HhHHHhhcCCceE
Q 006938 212 TIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFF-ALIEPVASRVAYH 290 (625)
Q Consensus 212 ~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~-~~l~~~~~~iP~~ 290 (625)
+||+++||+|..... ... ....+.+.. ...++|+||++||+++.+.....+.... .........+|++
T Consensus 1 ~ri~~isD~H~~~~~--------~~~-~~~~~~~~~--~~~~~d~ii~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (200)
T PF00149_consen 1 MRILVISDLHGGYDD--------DSD-AFRKLDEIA--AENKPDFIIFLGDLVDGGNPSEEWRAQFWFFIRLLNPKIPVY 69 (200)
T ss_dssp EEEEEEEBBTTTHHH--------HCH-HHHHHHHHH--HHTTTSEEEEESTSSSSSSHHHHHHHHHHHHHHHHHTTTTEE
T ss_pred CeEEEEcCCCCCCcc--------hhH-HHHHHHHHh--ccCCCCEEEeeccccccccccccchhhhccchhhhhcccccc
Confidence 489999999987421 001 112222222 2479999999999999876554444332 1233456789999
Q ss_pred EccCCCCCCCCCCCCCCCCCCCccCCCCCCcccccccccccc-CCCCCCCCCCCCCCCCCceEEEEeCcEEEEEEeCCcc
Q 006938 291 VCIGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKFHM-PGNSLEPTGTRAPATRNLYYSFDMGVVHFVYISTETN 369 (625)
Q Consensus 291 ~v~GNHD~~~~~~~~~~~~~~~~Y~~d~gge~~~~y~~~f~~-P~~~~~~~G~~~~~~~~~yYsfd~G~v~fI~LDT~~~ 369 (625)
+++||||+...... +. .......... ....... ..... .........+...+....
T Consensus 70 ~~~GNHD~~~~~~~---------~~-------~~~~~~~~~~~~~~~~~~------~~~~~-~~~~~~~~~~~~~~~~~~ 126 (200)
T PF00149_consen 70 FILGNHDYYSGNSF---------YG-------FYDYQFEDYYGNYNYYYS------YFNNK-VIFDNDNFWFNSGNNEYP 126 (200)
T ss_dssp EEE-TTSSHHHHHH---------HH-------HHHHHHSSEEECSSEEEC------TESSE-EEEEETTEEEEEHCCHTH
T ss_pred ccccccccceeccc---------cc-------cccccccccccccccccc------cCcce-eeeccccccccccccccc
Confidence 99999998521000 00 0000000000 0000000 00000 111122222222221111
Q ss_pred cCCChHHHHHHHHHhhccccCCCCeEEEEcccCCccCCCCCCChhhhHHHHHHHHHHHHHcCceEEEEcCccCc
Q 006938 370 FLQGSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVENNVTLALWGHVHRY 443 (625)
Q Consensus 370 ~~~~~~Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~~~d~~~~~~~~~~l~~l~~ky~VdlvlsGH~H~y 443 (625)
......+..|+...+....+...+++||++|+|++...............++.+..++.+++|+++|+||+|.|
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~H~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~GH~H~~ 200 (200)
T PF00149_consen 127 DYGMEAQQEWWLWLLLLLEAKNDDPVIVFTHHPPYSSSSDSSSYGNESKGREALEELLKKYNVDLVLSGHTHRY 200 (200)
T ss_dssp HSEHHHHHHHHHHHHHHHHEEEESEEEEEESSSSSTTSSSTHHHSSEEEHHHHHHHHHHHTTCSEEEEESSSSE
T ss_pred ccccccchhcccccccccccccccceeEEEecCCCCccccccccchhhccHHHHHHHHhhCCCCEEEeCceecC
Confidence 11122222332222222223456789999999999876543210001234678899999999999999999986
No 18
>cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain. DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat
Probab=99.59 E-value=6.1e-14 Score=141.83 Aligned_cols=207 Identities=14% Similarity=0.104 Sum_probs=122.9
Q ss_pred EEEEEecCCCCCC-CcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhcCCceEEc
Q 006938 214 AFLFGDMGAATPY-TTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASRVAYHVC 292 (625)
Q Consensus 214 f~v~GD~g~~~~~-~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~~iP~~~v 292 (625)
+++++|.|..... .+.........+.++.+.+.++++.++||+||++||+++... .......++.++.+ ..|++++
T Consensus 1 ~~~~sDlHl~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~D~viiaGDl~~~~~-~~~~~~~l~~l~~l--~~~v~~V 77 (232)
T cd07393 1 IFAIADLHLNLDPTKPMDVFGPEWKNHTEKIKENWDNVVAPEDIVLIPGDISWAMK-LEEAKLDLAWIDAL--PGTKVLL 77 (232)
T ss_pred CeEEEeeccCCCCCCCCcccCccHHHHHHHHHHHHHhcCCCCCEEEEcCCCccCCC-hHHHHHHHHHHHhC--CCCeEEE
Confidence 3678999977421 000011223345566666666666679999999999985432 22222333333332 3578999
Q ss_pred cCCCCCCCCCCCCCCCCCCCccCCCCCCccccccccccccCCCCCCCCCCCCCCCCCceEEEEeCcEEEEEEeCCc----
Q 006938 293 IGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKFHMPGNSLEPTGTRAPATRNLYYSFDMGVVHFVYISTET---- 368 (625)
Q Consensus 293 ~GNHD~~~~~~~~~~~~~~~~Y~~d~gge~~~~y~~~f~~P~~~~~~~G~~~~~~~~~yYsfd~G~v~fI~LDT~~---- 368 (625)
+||||+.... . ..+.+.+ +.. +. ......++.++++.|+.++...
T Consensus 78 ~GNHD~~~~~-----------~---------~~~~~~l--~~~-----~~----~~~~n~~~~~~~i~i~G~~~~~~~~~ 126 (232)
T cd07393 78 KGNHDYWWGS-----------A---------SKLRKAL--EES-----RL----ALLFNNAYIDDDVAICGTRGWDNPGN 126 (232)
T ss_pred eCCccccCCC-----------H---------HHHHHHH--Hhc-----Ce----EEeccCcEEECCEEEEEEEeeCCCCC
Confidence 9999983110 0 0011111 110 00 0001234567889999876311
Q ss_pred cc----------CC---ChHHHHHHHHHhhccccCC-CCeEEEEcccCCccCCCCCCChhhhHHHHHHHHHHHHHcCceE
Q 006938 369 NF----------LQ---GSNQYNFIKHDLESVDRKK-TPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVENNVTL 434 (625)
Q Consensus 369 ~~----------~~---~~~Q~~WL~~~L~~~~r~~-~~wiIV~~H~P~y~~~~~~~d~~~~~~~~~~l~~l~~ky~Vdl 434 (625)
.. .. ...|++||++.|+++.... ..++|+++|+|++..... .+.+..+++++++++
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~L~~~~~~~~~~~~i~~~H~p~~~~~~~----------~~~~~~~~~~~~v~~ 196 (232)
T cd07393 127 PWPPINETLKVEEDEKIFERELERLELSLKAAKKREKEKIKIVMLHYPPANENGD----------DSPISKLIEEYGVDI 196 (232)
T ss_pred ccccccccccchhHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCcCCCCC----------HHHHHHHHHHcCCCE
Confidence 10 00 2569999999999764322 246899999998765321 135678888999999
Q ss_pred EEEcCccCceeeeccCCccccCCCCCCCCCCCCcEEEEECCC
Q 006938 435 ALWGHVHRYERFCPLNNFTCGSMGMDGEPSEAFPVHIVIGMA 476 (625)
Q Consensus 435 vlsGH~H~yeR~~p~~~~~~~~~~~~~~~~~~g~vyIv~G~g 476 (625)
+|+||+|.+++..|+... .+++.|+.+.++
T Consensus 197 vl~GH~H~~~~~~~~~~~------------~~gi~~~~~~~~ 226 (232)
T cd07393 197 CVYGHLHGVGRDRAINGE------------RGGIRYQLVSAD 226 (232)
T ss_pred EEECCCCCCcccccccce------------ECCEEEEEEcch
Confidence 999999999988776432 256667666544
No 19
>TIGR03767 P_acnes_RR metallophosphoesterase, PPA1498 family. This model describes a small collection of probable metallophosphoresterases, related to pfam00149 but with long inserts separating some of the shared motifs such that the homology is apparent only through multiple sequence alignment. Members of this protein family, in general, have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. Members include YP_056203.1 from Propionibacterium acnes KPA171202.
Probab=99.58 E-value=3e-14 Score=153.99 Aligned_cols=96 Identities=26% Similarity=0.376 Sum_probs=71.9
Q ss_pred CCceEEEE-eCcEEEEEEeCCccc-----CCChHHHHHHHHHhhccccCCCCeEEEEcccCCccCCCCCCCh---hhhHH
Q 006938 348 RNLYYSFD-MGVVHFVYISTETNF-----LQGSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDA---PLRNR 418 (625)
Q Consensus 348 ~~~yYsfd-~G~v~fI~LDT~~~~-----~~~~~Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~~~d~---~~~~~ 418 (625)
+..||+|+ .++++||+|||.... ...++|++||+++|++. +.+++||++|||++.......+. .....
T Consensus 290 G~~YYSFd~~ggvrfIvLDSt~~~G~~~G~L~eeQL~WLeqeLa~a---~~k~VVVf~HHPp~s~g~~~~Dp~~pg~~~~ 366 (496)
T TIGR03767 290 GTGYYTFDIAGGVRGISMDTTNRAGGDEGSLGQTQFKWIKDTLRAS---SDTLFVLFSHHTSWSMVNELTDPVDPGEKRH 366 (496)
T ss_pred CCceEEEEeECCEEEEEEeCCCcCCCcCCccCHHHHHHHHHHHhcC---CCCCEEEEECCCCcccccccccccccccccc
Confidence 56799999 899999999996321 23589999999999973 34569999999998754322110 00112
Q ss_pred HHHHHHHHHHHc-CceEEEEcCccCceee
Q 006938 419 MLEHLEPLFVEN-NVTLALWGHVHRYERF 446 (625)
Q Consensus 419 ~~~~l~~l~~ky-~VdlvlsGH~H~yeR~ 446 (625)
..++|.++|.+| +|.++|+||.|.....
T Consensus 367 n~~eLldLL~~ypnV~aVfsGHvH~n~i~ 395 (496)
T TIGR03767 367 LGTELVSLLLEHPNVLAWVNGHTHSNKIT 395 (496)
T ss_pred CHHHHHHHHhcCCCceEEEECCcCCCccc
Confidence 346899999998 8999999999987644
No 20
>cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain. DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP
Probab=99.50 E-value=3.2e-13 Score=133.25 Aligned_cols=164 Identities=17% Similarity=0.195 Sum_probs=99.9
Q ss_pred cceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchh-hHHHHHHhHHHhh-cCCc
Q 006938 211 ETIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSW-LWDEFFALIEPVA-SRVA 288 (625)
Q Consensus 211 ~~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~-~wd~f~~~l~~~~-~~iP 288 (625)
.+++++++|+|......... .......+.+.+.+.++ ..+|||||++||+++...... .+..+.+.++++. ..+|
T Consensus 2 ~~ki~~isDlH~~~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~d~vv~~GDl~~~~~~~~~~~~~~~~~~~~l~~~~~p 78 (199)
T cd07383 2 KFKILQFADLHFGEGEGTCE-GCEADLKTVAFIERVLD--AEKPDLVVLTGDLITGENTNDNSTSALDKAVSPMIDRKIP 78 (199)
T ss_pred ceEEEEEeeecccCCCCCCC-cchhhHHHHHHHHHHHh--hcCCCEEEECCccccCCCCchHHHHHHHHHHHHHHHcCCC
Confidence 47899999999875421100 00011233444433333 358999999999998765432 2333444444443 4799
Q ss_pred eEEccCCCCCCCCCCCCCCCCCCCccCCCCCCccccccccccccCCCCCCCCCCCCCCCCCceEEEEeCcEEEEEEeCCc
Q 006938 289 YHVCIGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKFHMPGNSLEPTGTRAPATRNLYYSFDMGVVHFVYISTET 368 (625)
Q Consensus 289 ~~~v~GNHD~~~~~~~~~~~~~~~~Y~~d~gge~~~~y~~~f~~P~~~~~~~G~~~~~~~~~yYsfd~G~v~fI~LDT~~ 368 (625)
+++++||||.. |
T Consensus 79 ~~~~~GNHD~~-----------------------------------------g--------------------------- 90 (199)
T cd07383 79 WAATFGNHDGY-----------------------------------------D--------------------------- 90 (199)
T ss_pred EEEECccCCCC-----------------------------------------C---------------------------
Confidence 99999999931 0
Q ss_pred ccCCChHHHHHHHHHhhccc--cCCCCeEEEEcccCCccCCCC----------CCChhhhHHHHHHHHH-HHHHcCceEE
Q 006938 369 NFLQGSNQYNFIKHDLESVD--RKKTPFVVVQGHRPMYTTSNE----------NRDAPLRNRMLEHLEP-LFVENNVTLA 435 (625)
Q Consensus 369 ~~~~~~~Q~~WL~~~L~~~~--r~~~~wiIV~~H~P~y~~~~~----------~~d~~~~~~~~~~l~~-l~~ky~Vdlv 435 (625)
.....|++||+++|++.. +....+.++++|+|+...... ..+..........+.. +.+..+|+++
T Consensus 91 --~l~~~ql~wL~~~l~~~~~~~~~~~~~l~f~H~P~~~~~~~~~~~~~~~g~~~d~~~~~~~~~~~~~~~~~~~~v~~v 168 (199)
T cd07383 91 --WIRPSQIEWFKETSAALKKKYGKPIPSLAFFHIPLPEYREVWEGKGKVPGINNEKVCCPKINSGLFKALLERGDVKGV 168 (199)
T ss_pred --CCCHHHHHHHHHHHHHHhhccCCCCcceEEEecChHHHHhhhcccCCCCccCCcccCCCcCCcHHHHHHHHcCCeEEE
Confidence 012579999999999863 233456999999998653210 0010001111233434 4466799999
Q ss_pred EEcCccCceeee
Q 006938 436 LWGHVHRYERFC 447 (625)
Q Consensus 436 lsGH~H~yeR~~ 447 (625)
|+||+|.++...
T Consensus 169 ~~GH~H~~~~~~ 180 (199)
T cd07383 169 FCGHDHGNDFCG 180 (199)
T ss_pred EeCCCCCcceec
Confidence 999999987654
No 21
>TIGR03768 RPA4764 metallophosphoesterase, RPA4764 family. This model describes a small collection of probable metallophosphoresterases, related to pfam00149. Members of this protein family usually have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. This model and TIGR03767 divide a narrow clade of pfam00149-related enzymes.
Probab=99.40 E-value=6.6e-12 Score=134.68 Aligned_cols=96 Identities=17% Similarity=0.244 Sum_probs=66.8
Q ss_pred CCceEEEE-eCcE--EEEEEeCCccc-----------CCChHHHHHHHHHhhccccCCCCeEEEEcccCCccCCCCCC-C
Q 006938 348 RNLYYSFD-MGVV--HFVYISTETNF-----------LQGSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENR-D 412 (625)
Q Consensus 348 ~~~yYsfd-~G~v--~fI~LDT~~~~-----------~~~~~Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~~~-d 412 (625)
+..||+|+ .|++ |||+||+.... ...++|++||+++|+.+. .+.+++|+++|+|+.+...... .
T Consensus 291 G~~yYsFd~~g~vplrvIvLDSt~~~~~~s~pG~~~G~Ld~eQLaWLe~~La~a~-a~~p~VVV~hHpPi~t~gi~~md~ 369 (492)
T TIGR03768 291 DFACYSFVPKSDVPLKVIVLDDTQSEHDGSHDIHGHGSLDAKRWDWLKAELARGQ-ADGQLMIIAAHIPIAVSPIGSEME 369 (492)
T ss_pred CcceeEEecCCCcceEEEEECCCccccccCCCCCcceeeCHHHHHHHHHHHHhCc-CCCceEEEEeCCCcccCCccchhh
Confidence 45699999 5855 99999986311 135899999999999865 2457788888888876322110 0
Q ss_pred hh---------hhH-HHHHHHHHHHHHc-CceEEEEcCccCce
Q 006938 413 AP---------LRN-RMLEHLEPLFVEN-NVTLALWGHVHRYE 444 (625)
Q Consensus 413 ~~---------~~~-~~~~~l~~l~~ky-~VdlvlsGH~H~ye 444 (625)
+. ... ....+|..+|.+| +|.++||||.|...
T Consensus 370 w~~~~~~~~~~L~n~~~~~eLlaLL~~hPnVla~LsGHvHrn~ 412 (492)
T TIGR03768 370 WWLGAADANPDLQNAVSLTGLVTTLQKYPNLLMWIAGHRHLNT 412 (492)
T ss_pred hccccccccccccccccHHHHHHHHhcCCCeEEEEcCCccccc
Confidence 00 101 1124799999999 79899999999743
No 22
>cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain. PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina
Probab=99.39 E-value=8.1e-12 Score=121.06 Aligned_cols=148 Identities=18% Similarity=0.120 Sum_probs=89.1
Q ss_pred CCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhcCCceEEccCCCCCCCCCCCCCCCCCCCccCCCCCCcccccccccc
Q 006938 251 GDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASRVAYHVCIGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKF 330 (625)
Q Consensus 251 ~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~~iP~~~v~GNHD~~~~~~~~~~~~~~~~Y~~d~gge~~~~y~~~f 330 (625)
..+||+||++||+++.... .....+ +.+. ...+|+++++||||..... . ......
T Consensus 21 ~~~~D~vv~~GDl~~~~~~-~~~~~~-~~l~--~~~~p~~~v~GNHD~~~~~------------~---------~~~~~~ 75 (188)
T cd07392 21 AEEADAVIVAGDITNFGGK-EAAVEI-NLLL--AIGVPVLAVPGNCDTPEIL------------G---------LLTSAG 75 (188)
T ss_pred ccCCCEEEECCCccCcCCH-HHHHHH-HHHH--hcCCCEEEEcCCCCCHHHH------------H---------hhhcCc
Confidence 3689999999999875532 222222 3332 2478999999999974110 0 000000
Q ss_pred ccCCCCCCCCCCCCCCCCCceEEEEeCcEEEEEEeCCcc------cCCChHHHHHHHHHhhccccCCCCeEEEEcccCCc
Q 006938 331 HMPGNSLEPTGTRAPATRNLYYSFDMGVVHFVYISTETN------FLQGSNQYNFIKHDLESVDRKKTPFVVVQGHRPMY 404 (625)
Q Consensus 331 ~~P~~~~~~~G~~~~~~~~~yYsfd~G~v~fI~LDT~~~------~~~~~~Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y 404 (625)
... . -..+.++++.|+.+++... ....++|++|+ +.|.. ...+.+|+++|+|++
T Consensus 76 ~~~--------------~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~-~~l~~---~~~~~~ilv~H~pp~ 135 (188)
T cd07392 76 LNL--------------H--GKVVEVGGYTFVGIGGSNPTPFNTPIELSEEEIVSD-GRLNN---LLAKNLILVTHAPPY 135 (188)
T ss_pred Eec--------------C--CCEEEECCEEEEEeCCCCCCCCCCccccCHHHHHHh-hhhhc---cCCCCeEEEECCCCc
Confidence 000 0 1235678899999987421 12346899998 44443 223448999999997
Q ss_pred cCCCCCCChhhhHHHHHHHHHHHHHcCceEEEEcCccCce
Q 006938 405 TTSNENRDAPLRNRMLEHLEPLFVENNVTLALWGHVHRYE 444 (625)
Q Consensus 405 ~~~~~~~d~~~~~~~~~~l~~l~~ky~VdlvlsGH~H~ye 444 (625)
.......... ...-.+.+..++++++++++|+||.|.-.
T Consensus 136 ~~~~d~~~~~-~~~g~~~l~~li~~~~~~~~l~GH~H~~~ 174 (188)
T cd07392 136 GTAVDRVSGG-FHVGSKAIRKFIEERQPLLCICGHIHESR 174 (188)
T ss_pred CCcccccCCC-CccCCHHHHHHHHHhCCcEEEEecccccc
Confidence 6311111000 00123578888999999999999999854
No 23
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=99.39 E-value=6.5e-12 Score=127.54 Aligned_cols=185 Identities=15% Similarity=0.139 Sum_probs=105.0
Q ss_pred eEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhcCCceEEc
Q 006938 213 IAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASRVAYHVC 292 (625)
Q Consensus 213 ~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~~iP~~~v 292 (625)
+++.++|.|.... .+ .....++.+++.+++ .++|+|+++||++... .+...+++.+... ..+|++.+
T Consensus 1 ki~~iSDlH~~~~--~~-----~~~~~l~~~~~~~~~--~~~d~vv~~GDl~~~~---~~~~~~~~~l~~~-~~~pv~~v 67 (239)
T TIGR03729 1 KIAFSSDLHIDLN--HF-----DTEEMLETLAQYLKK--QKIDHLHIAGDISNDF---QRSLPFIEKLQEL-KGIKVTFN 67 (239)
T ss_pred CEEEEEeecCCCC--CC-----CHHHHHHHHHHHHHh--cCCCEEEECCccccch---hhHHHHHHHHHHh-cCCcEEEE
Confidence 4789999997421 11 112235556666654 4799999999998642 1223344444432 46899999
Q ss_pred cCCCCCCCCCCCCCCCCCCCccCCCCCCccccccccccccCCCCCCCCCCCCCCCCCceEEEEeCcEEEEEEeCCccc--
Q 006938 293 IGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKFHMPGNSLEPTGTRAPATRNLYYSFDMGVVHFVYISTETNF-- 370 (625)
Q Consensus 293 ~GNHD~~~~~~~~~~~~~~~~Y~~d~gge~~~~y~~~f~~P~~~~~~~G~~~~~~~~~yYsfd~G~v~fI~LDT~~~~-- 370 (625)
+||||+.... . +. .+...+. +. ...+.++.+..++++|++++-..++
T Consensus 68 ~GNHD~~~~~-~----~~--------------~~~~~~~-~~-----------~l~~~~~~~~~~~~~~ig~~gw~d~~~ 116 (239)
T TIGR03729 68 AGNHDMLKDL-T----YE--------------EIESNDS-PL-----------YLHNRFIDIPNTQWRIIGNNGWYDYSF 116 (239)
T ss_pred CCCCCCCCCC-C----HH--------------HHHhccc-hh-----------hhcccccccCCCceEEEeeccceeccc
Confidence 9999984110 0 00 0000000 00 0011222233356677766621110
Q ss_pred -----------------------C------CChHHHHHHHHHhhccccCCCCeEEEEcccCCccCCC----CCCChhh-h
Q 006938 371 -----------------------L------QGSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSN----ENRDAPL-R 416 (625)
Q Consensus 371 -----------------------~------~~~~Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~----~~~d~~~-~ 416 (625)
. ...+|++||++.|++.. . . .+||++|+|+..... ....+.. .
T Consensus 117 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~-~-~-~~ivvtH~pP~~~~~~~~~~~~~~~~~~ 193 (239)
T TIGR03729 117 SNDKTSKEILRWKKSFWFDRRIKRPMSDPERTAIVLKQLKKQLNQLD-N-K-QVIFVTHFVPHRDFIYVPMDHRRFDMFN 193 (239)
T ss_pred ccccCHHHHHHhhhcEEeecccCCCCChHHHHHHHHHHHHHHHHhcC-C-C-CEEEEEcccchHHHhcCCCCCcchhhhh
Confidence 0 12678999999998753 2 2 288888998754211 1011110 0
Q ss_pred -HHHHHHHHHHHHHcCceEEEEcCccCce
Q 006938 417 -NRMLEHLEPLFVENNVTLALWGHVHRYE 444 (625)
Q Consensus 417 -~~~~~~l~~l~~ky~VdlvlsGH~H~ye 444 (625)
....+.|.+++++++|+++|+||.|.-.
T Consensus 194 ~~~~s~~l~~li~~~~v~~~i~GH~H~~~ 222 (239)
T TIGR03729 194 AFLGSQHFGQLLVKYEIKDVIFGHLHRRF 222 (239)
T ss_pred hccChHHHHHHHHHhCCCEEEECCccCCC
Confidence 0113678899999999999999999864
No 24
>COG1409 Icc Predicted phosphohydrolases [General function prediction only]
Probab=99.37 E-value=1.2e-11 Score=128.09 Aligned_cols=186 Identities=18% Similarity=0.197 Sum_probs=117.5
Q ss_pred ceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhcCCceEE
Q 006938 212 TIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASRVAYHV 291 (625)
Q Consensus 212 ~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~~iP~~~ 291 (625)
.+++.++|.+.... ...+.+.+..+++.++ ..+||+||++||+++. +....++...+.++......|+++
T Consensus 1 ~~i~~isD~H~~~~-------~~~~~~~~~~~~~~i~--~~~~D~~v~tGDl~~~-~~~~~~~~~~~~l~~~~~~~~~~~ 70 (301)
T COG1409 1 MRIAHISDLHLGAL-------GVDSEELLEALLAAIE--QLKPDLLVVTGDLTND-GEPEEYRRLKELLARLELPAPVIV 70 (301)
T ss_pred CeEEEEecCccccc-------ccchHHHHHHHHHHHh--cCCCCEEEEccCcCCC-CCHHHHHHHHHHHhhccCCCceEe
Confidence 36889999998831 0123445555666665 3688999999999987 555556655555654556789999
Q ss_pred ccCCCCCCCCCCCCCCCCCCCccCCCCCCccccccccccccCCCCCCCCCCCCCCCCCceEEEEe-CcEEEEEEeCCccc
Q 006938 292 CIGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKFHMPGNSLEPTGTRAPATRNLYYSFDM-GVVHFVYISTETNF 370 (625)
Q Consensus 292 v~GNHD~~~~~~~~~~~~~~~~Y~~d~gge~~~~y~~~f~~P~~~~~~~G~~~~~~~~~yYsfd~-G~v~fI~LDT~~~~ 370 (625)
+|||||....... .+...+.... ..+-.... ++++++.+|+....
T Consensus 71 vpGNHD~~~~~~~--------------------~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~d~~~~~ 116 (301)
T COG1409 71 VPGNHDARVVNGE--------------------AFSDQFFNRY--------------AVLVGACSSGGWRVIGLDSSVPG 116 (301)
T ss_pred eCCCCcCCchHHH--------------------HhhhhhcccC--------------cceEeeccCCceEEEEecCCCCC
Confidence 9999998632110 0111111000 01111112 67899999986432
Q ss_pred ----CCChHHHHHHHHHhhccccCCCCeEEEEcccCCccCCCCCCChhhhHHHHHHHHHHHHHcC--ceEEEEcCccCc
Q 006938 371 ----LQGSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVENN--VTLALWGHVHRY 443 (625)
Q Consensus 371 ----~~~~~Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~~~d~~~~~~~~~~l~~l~~ky~--VdlvlsGH~H~y 443 (625)
..+..|++||++.|++........+|+++|+|+.......... .......+..++..++ |+++|+||.|.-
T Consensus 117 ~~~G~~~~~q~~~l~~~l~~~~~~~~~~~v~~~hh~~~~~~~~~~~~--~l~~~~~~~~~~~~~~~~v~~vl~GH~H~~ 193 (301)
T COG1409 117 VPLGRLGAEQLDWLEEALAAAPERAKDTVVVLHHHPLPSPGTGVDRV--ALRDAGELLDVLIAHGNDVRLVLSGHIHLA 193 (301)
T ss_pred CCCCEECHHHHHHHHHHHHhCccccCceEEEecCCCCCCCCCcccee--eeecchhHHHHHHhcCCceEEEEeCccccc
Confidence 2468999999999998543211246777777776644332211 1122356667888887 999999999986
No 25
>cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain. YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia
Probab=99.34 E-value=1.2e-11 Score=123.80 Aligned_cols=173 Identities=17% Similarity=0.194 Sum_probs=101.7
Q ss_pred ceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhcCCceEE
Q 006938 212 TIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASRVAYHV 291 (625)
Q Consensus 212 ~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~~iP~~~ 291 (625)
+++++++|+|..... ..+.++.+++.+++ .+||+|+++||+++...... +.+.+.++.+...+|+++
T Consensus 2 ~~i~~~sDlH~~~~~---------~~~~~~~~~~~~~~--~~~d~vl~~GD~~~~~~~~~--~~~~~~l~~l~~~~~v~~ 68 (223)
T cd07385 2 LRIAHLSDLHLGPFV---------SRERLERLVEKINA--LKPDLVVLTGDLVDGSVDVL--ELLLELLKKLKAPLGVYA 68 (223)
T ss_pred CEEEEEeecCCCccC---------CHHHHHHHHHHHhc--cCCCEEEEcCcccCCcchhh--HHHHHHHhccCCCCCEEE
Confidence 689999999987432 12345556665543 58999999999998654332 344555555556799999
Q ss_pred ccCCCCCCCCCCCCCCCCCCCccCCCCCCccccccccccccCCCCCCCCCCCCCCCCCceEEEEeCcEEEEEEeCCcccC
Q 006938 292 CIGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKFHMPGNSLEPTGTRAPATRNLYYSFDMGVVHFVYISTETNFL 371 (625)
Q Consensus 292 v~GNHD~~~~~~~~~~~~~~~~Y~~d~gge~~~~y~~~f~~P~~~~~~~G~~~~~~~~~yYsfd~G~v~fI~LDT~~~~~ 371 (625)
++||||+...... .+...+. .. |. .-..+.+..++.++..+.++--..
T Consensus 69 v~GNHD~~~~~~~--------------------~~~~~l~-~~------~v--~~L~~~~~~~~~~~~~i~i~G~~~--- 116 (223)
T cd07385 69 VLGNHDYYSGDEE--------------------NWIEALE-SA------GI--TVLRNESVEISVGGATIGIAGVDD--- 116 (223)
T ss_pred ECCCcccccCchH--------------------HHHHHHH-Hc------CC--EEeecCcEEeccCCeEEEEEeccC---
Confidence 9999998532100 0000000 00 00 000122444555554444332111
Q ss_pred CChHHHHHHHHHhhccccCCCCeEEEEcccCCccCCCCCCChhhhHHHHHHHHHHHHHcCceEEEEcCccCceeeeccCC
Q 006938 372 QGSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVENNVTLALWGHVHRYERFCPLNN 451 (625)
Q Consensus 372 ~~~~Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~~~d~~~~~~~~~~l~~l~~ky~VdlvlsGH~H~yeR~~p~~~ 451 (625)
.....+++.+.+++.+ +.++.|++.|.|.+.. .+.+.++|++++||+|..|...|...
T Consensus 117 -~~~~~~~~~~~~~~~~--~~~~~I~l~H~P~~~~-------------------~~~~~~~dl~l~GHtHggqi~~~~~~ 174 (223)
T cd07385 117 -GLGRRPDLEKALKGLD--EDDPNILLAHQPDTAE-------------------EAAAWGVDLQLSGHTHGGQIRLPGIG 174 (223)
T ss_pred -ccccCCCHHHHHhCCC--CCCCEEEEecCCChhH-------------------HhcccCccEEEeccCCCCEEeccccc
Confidence 1122345666666543 3446899999875321 11457999999999999998876553
No 26
>cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain. YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv
Probab=99.32 E-value=1.9e-11 Score=113.83 Aligned_cols=127 Identities=20% Similarity=0.231 Sum_probs=85.9
Q ss_pred EEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhcC-CceEEc
Q 006938 214 AFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASR-VAYHVC 292 (625)
Q Consensus 214 f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~~-iP~~~v 292 (625)
++.++|.+.+...... .......++.+++.++ ..+||+|+++||+++... ..+|+.+.+.++.+... +|++.+
T Consensus 1 il~isD~Hl~~~~~~~---~~~~~~~l~~~~~~~~--~~~~d~vi~~GDl~~~~~-~~~~~~~~~~~~~l~~~~~~~~~v 74 (144)
T cd07400 1 ILHLSDLHFGPERKPE---LLALLSLLDRLLAEIK--ALDPDLVVITGDLTQRGL-PEEFEEAREFLDALPAPLEPVLVV 74 (144)
T ss_pred CeEeCccCCCCCcchh---HHHHHHHHHHHHHHHh--ccCCCEEEECCCCCCCCC-HHHHHHHHHHHHHccccCCcEEEe
Confidence 4678999987542110 0111111334454444 358999999999998653 45666666666655433 699999
Q ss_pred cCCCCCCCCCCCCCCCCCCCccCCCCCCccccccccccccCCCCCCCCCCCCCCCCCceEEEEeCcEEEEEEeCCcccCC
Q 006938 293 IGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKFHMPGNSLEPTGTRAPATRNLYYSFDMGVVHFVYISTETNFLQ 372 (625)
Q Consensus 293 ~GNHD~~~~~~~~~~~~~~~~Y~~d~gge~~~~y~~~f~~P~~~~~~~G~~~~~~~~~yYsfd~G~v~fI~LDT~~~~~~ 372 (625)
+|||| .
T Consensus 75 ~GNHD-----------------------------------------------------~--------------------- 80 (144)
T cd07400 75 PGNHD-----------------------------------------------------V--------------------- 80 (144)
T ss_pred CCCCe-----------------------------------------------------E---------------------
Confidence 99999 0
Q ss_pred ChHHHHHHHHHhhccccCCCCeEEEEcccCCccCCCCCCChhhhHHHHHHHHHHHHHcCceEEEEcCccCceee
Q 006938 373 GSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVENNVTLALWGHVHRYERF 446 (625)
Q Consensus 373 ~~~Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~~~d~~~~~~~~~~l~~l~~ky~VdlvlsGH~H~yeR~ 446 (625)
|+++|+|++........... ..+.+.+++.+++++++|+||+|.....
T Consensus 81 -----------------------iv~~Hhp~~~~~~~~~~~~~---~~~~~~~~l~~~~~~~~l~GH~H~~~~~ 128 (144)
T cd07400 81 -----------------------IVVLHHPLVPPPGSGRERLL---DAGDALKLLAEAGVDLVLHGHKHVPYVG 128 (144)
T ss_pred -----------------------EEEecCCCCCCCccccccCC---CHHHHHHHHHHcCCCEEEECCCCCcCee
Confidence 88899999876543222111 3567899999999999999999997644
No 27
>cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain. This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets,
Probab=99.30 E-value=1.7e-10 Score=115.60 Aligned_cols=174 Identities=11% Similarity=0.097 Sum_probs=101.9
Q ss_pred ceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhcCCceEE
Q 006938 212 TIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASRVAYHV 291 (625)
Q Consensus 212 ~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~~iP~~~ 291 (625)
-++++++|.+.. ...++.+++.+++ .++|+|+++||+++.......+..+++.+.. ..+|+++
T Consensus 5 ~kIl~iSDiHgn-------------~~~le~l~~~~~~--~~~D~vv~~GDl~~~g~~~~~~~~~l~~l~~--l~~pv~~ 67 (224)
T cd07388 5 RYVLATSNPKGD-------------LEALEKLVGLAPE--TGADAIVLIGNLLPKAAKSEDYAAFFRILGE--AHLPTFY 67 (224)
T ss_pred eEEEEEEecCCC-------------HHHHHHHHHHHhh--cCCCEEEECCCCCCCCCCHHHHHHHHHHHHh--cCCceEE
Confidence 468999999875 2345556654432 5899999999999865333334444444432 2589999
Q ss_pred ccCCCCCCCCCCCCCCCCCCCccCCCCCCccccccccccccCCCCCCCCCCCCCCCCCceEEEEe-CcEEEEEEeCCccc
Q 006938 292 CIGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKFHMPGNSLEPTGTRAPATRNLYYSFDM-GVVHFVYISTETNF 370 (625)
Q Consensus 292 v~GNHD~~~~~~~~~~~~~~~~Y~~d~gge~~~~y~~~f~~P~~~~~~~G~~~~~~~~~yYsfd~-G~v~fI~LDT~~~~ 370 (625)
++||||.... ..+.. .|.....+|..-. ....+ ..+ |++.|+.|+-....
T Consensus 68 V~GNhD~~v~-~~l~~-----------------~~~~~~~~p~~~~---------lh~~~--~~~~g~~~~~GlGGs~~~ 118 (224)
T cd07388 68 VPGPQDAPLW-EYLRE-----------------AYNAELVHPEIRN---------VHETF--AFWRGPYLVAGVGGEIAD 118 (224)
T ss_pred EcCCCChHHH-HHHHH-----------------HhcccccCcccee---------cCCCe--EEecCCeEEEEecCCcCC
Confidence 9999996310 00000 0100000111000 01112 344 56999999854322
Q ss_pred --CCChHHH----HHHHH----HhhccccCCCCeEEEEcccCCccCCCCCCChhhhHHHHHHHHHHHHHcCceEEEEcCc
Q 006938 371 --LQGSNQY----NFIKH----DLESVDRKKTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVENNVTLALWGHV 440 (625)
Q Consensus 371 --~~~~~Q~----~WL~~----~L~~~~r~~~~wiIV~~H~P~y~~~~~~~d~~~~~~~~~~l~~l~~ky~VdlvlsGH~ 440 (625)
...++|. .||.+ .|.+. ..+..|+++|+|+|..+..... .+.+..++++++..+++|||.
T Consensus 119 ~~e~sE~e~~~~~~~~~~~~l~~~~~~---~~~~~VLv~H~PP~g~g~~h~G-------S~alr~~I~~~~P~l~i~GHi 188 (224)
T cd07388 119 EGEPEEHEALRYPAWVAEYRLKALWEL---KDYRKVFLFHTPPYHKGLNEQG-------SHEVAHLIKTHNPLVVLVGGK 188 (224)
T ss_pred CCCcCHHHHhhhhhhHHHHHHHHHHhC---CCCCeEEEECCCCCCCCCCccC-------HHHHHHHHHHhCCCEEEEcCC
Confidence 2345552 56433 33332 2335899999999987421111 356778999999999999999
Q ss_pred c
Q 006938 441 H 441 (625)
Q Consensus 441 H 441 (625)
|
T Consensus 189 h 189 (224)
T cd07388 189 G 189 (224)
T ss_pred c
Confidence 9
No 28
>cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain. Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi
Probab=99.26 E-value=8.1e-11 Score=117.32 Aligned_cols=200 Identities=13% Similarity=0.146 Sum_probs=111.2
Q ss_pred eEEEEEecCCCCCCCcccc--cchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCC-chhhHHHHHHhHHHhh-cCCc
Q 006938 213 IAFLFGDMGAATPYTTFER--TQDESISTMKWILRDIEALGDKPAFVSHIGDISYARG-YSWLWDEFFALIEPVA-SRVA 288 (625)
Q Consensus 213 ~f~v~GD~g~~~~~~~~~~--~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g-~~~~wd~f~~~l~~~~-~~iP 288 (625)
+|+.++|+|.+........ ......+.++++++.+.+ .+||+|+++||+++... ....+..+.+.++.+. ..+|
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~d~i~~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIE--EKVDFVLIAGDLFDSNNPSPEALELLIEALRRLKEAGIP 78 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHh--cCCCEEEECCcccCCCCCCHHHHHHHHHHHHHHHHCCCC
Confidence 5889999998754321100 012344567777766554 58999999999987653 2334555666666554 5899
Q ss_pred eEEccCCCCCCCCCCCCCCCCCCCccCCCCCCccccccccccccCCCCCCCCCCCCCCCCCceEEEEeCcEEEEEEeCCc
Q 006938 289 YHVCIGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKFHMPGNSLEPTGTRAPATRNLYYSFDMGVVHFVYISTET 368 (625)
Q Consensus 289 ~~~v~GNHD~~~~~~~~~~~~~~~~Y~~d~gge~~~~y~~~f~~P~~~~~~~G~~~~~~~~~yYsfd~G~v~fI~LDT~~ 368 (625)
+++++||||.......+.. . ..+. .+..-... + .........++..++.|+.++...
T Consensus 79 v~~~~GNHD~~~~~~~~~~------~---------~~~~-~~~~~~~~----~---~~~~~~~~~~~~~~v~i~g~~~~~ 135 (223)
T cd00840 79 VFIIAGNHDSPSRLGALSP------L---------LALS-GLHLVGVE----E---DVLTPLLLPKGGTGVAIYGLPYLR 135 (223)
T ss_pred EEEecCCCCCccccccccc------h---------HhhC-cEEEEccc----C---cceeEEEeccCCeEEEEEECCCCC
Confidence 9999999998642111000 0 0000 00000000 0 000112333455568888887532
Q ss_pred ccCCChHHHHHHHHHhhccccCCCCeEEEEcccCCccCCCCCCChhhhHHHHHHHHHHHHHcCceEEEEcCccCceee
Q 006938 369 NFLQGSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVENNVTLALWGHVHRYERF 446 (625)
Q Consensus 369 ~~~~~~~Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~~~d~~~~~~~~~~l~~l~~ky~VdlvlsGH~H~yeR~ 446 (625)
.. ....+.++++..+.... +....|++.|.|+.......... .......+...++|++++||.|..+..
T Consensus 136 ~~-~~~~~~~~~~~~~~~~~--~~~~~Il~~H~~~~~~~~~~~~~------~~~~~~~~~~~~~d~v~~GH~H~~~~~ 204 (223)
T cd00840 136 RS-RLRDLLADAELRPRPLD--PDDFNILLLHGGVAGAGPSDSER------APFVPEALLPAGFDYVALGHIHRPQII 204 (223)
T ss_pred HH-HHHHHHHHHHHHhhccC--CCCcEEEEEeeeeecCCCCcccc------cccCcHhhcCcCCCEEECCCcccCeee
Confidence 11 12334455555555433 34559999999986543222110 122334455678999999999997643
No 29
>PRK11340 phosphodiesterase YaeI; Provisional
Probab=99.23 E-value=3.5e-10 Score=117.09 Aligned_cols=82 Identities=16% Similarity=0.248 Sum_probs=57.0
Q ss_pred CCCCCcceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhc
Q 006938 206 NEDSNETIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVAS 285 (625)
Q Consensus 206 p~~~~~~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~ 285 (625)
|...+++++++++|.|..... ....++++++.+++ .+||+|+++||+++.+ ....++.+.+.++.+.+
T Consensus 44 ~~~~~~~rI~~lSDlH~~~~~---------~~~~l~~~v~~i~~--~~pDlVli~GD~~d~~-~~~~~~~~~~~L~~L~~ 111 (271)
T PRK11340 44 KDNAAPFKILFLADLHYSRFV---------PLSLISDAIALGIE--QKPDLILLGGDYVLFD-MPLNFSAFSDVLSPLAE 111 (271)
T ss_pred CCCCCCcEEEEEcccCCCCcC---------CHHHHHHHHHHHHh--cCCCEEEEccCcCCCC-ccccHHHHHHHHHHHhh
Confidence 333456999999999976321 12234556665543 5899999999998732 12234556666676666
Q ss_pred CCceEEccCCCCCC
Q 006938 286 RVAYHVCIGNHEYD 299 (625)
Q Consensus 286 ~iP~~~v~GNHD~~ 299 (625)
..|+++++||||+.
T Consensus 112 ~~pv~~V~GNHD~~ 125 (271)
T PRK11340 112 CAPTFACFGNHDRP 125 (271)
T ss_pred cCCEEEecCCCCcc
Confidence 78999999999984
No 30
>cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain. MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t
Probab=99.20 E-value=8.8e-11 Score=112.31 Aligned_cols=126 Identities=19% Similarity=0.216 Sum_probs=76.1
Q ss_pred CCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhcCCceEEccCCCCCCCCCCCCCCCCCCCccCCCCCCcccccccccc
Q 006938 251 GDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASRVAYHVCIGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKF 330 (625)
Q Consensus 251 ~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~~iP~~~v~GNHD~~~~~~~~~~~~~~~~Y~~d~gge~~~~y~~~f 330 (625)
..++|+++++||+++.... ..+ ...........|+++++||||+.. +|
T Consensus 24 ~~~~d~li~~GDi~~~~~~-~~~---~~~~~~~~~~~~v~~v~GNHD~~~----------------------------~~ 71 (166)
T cd07404 24 APDADILVLAGDIGYLTDA-PRF---APLLLALKGFEPVIYVPGNHEFYV----------------------------RI 71 (166)
T ss_pred CCCCCEEEECCCCCCCcch-HHH---HHHHHhhcCCccEEEeCCCcceEE----------------------------EE
Confidence 4689999999999875432 222 212223346789999999999730 01
Q ss_pred ccCCCCCCCCCCCCCCCCCceEEEEeCcEEEEEEeCCcccCCChHHHHHHHHHhhccccCCCCeEEEEcccCCccCCCCC
Q 006938 331 HMPGNSLEPTGTRAPATRNLYYSFDMGVVHFVYISTETNFLQGSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNEN 410 (625)
Q Consensus 331 ~~P~~~~~~~G~~~~~~~~~yYsfd~G~v~fI~LDT~~~~~~~~~Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~~ 410 (625)
. |. ..||.+... .+++.+|+.++++ +.+||++|+|+.......
T Consensus 72 --~-------G~------~~w~~~~~~---------------~~~~~~~~~~d~~-------~~~vv~~HhpP~~~~~~~ 114 (166)
T cd07404 72 --I-------GT------TLWSDISLF---------------GEAAARMRMNDFR-------GKTVVVTHHAPSPLSLAP 114 (166)
T ss_pred --E-------ee------ecccccCcc---------------chHHHHhCCCCCC-------CCEEEEeCCCCCccccCc
Confidence 0 10 113322211 1235555555554 238999999998754322
Q ss_pred CC--hhhhHHHHHHHHHHHHHcCceEEEEcCccCcee
Q 006938 411 RD--APLRNRMLEHLEPLFVENNVTLALWGHVHRYER 445 (625)
Q Consensus 411 ~d--~~~~~~~~~~l~~l~~ky~VdlvlsGH~H~yeR 445 (625)
.+ ........+.+..++++++|+++++||+|....
T Consensus 115 ~~~~~~~~~~~~~~l~~~~~~~~v~~~i~GH~H~~~~ 151 (166)
T cd07404 115 QYGDSLVNAAFAVDLDDLILADPIDLWIHGHTHFNFD 151 (166)
T ss_pred cccCCCcchhhhhccHhHHhhcCCCEEEECCccccce
Confidence 11 111123456677888889999999999998643
No 31
>KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only]
Probab=99.20 E-value=2e-09 Score=110.57 Aligned_cols=90 Identities=14% Similarity=0.264 Sum_probs=58.3
Q ss_pred CCcceEEEEEecCCCCCCC-ccc-ccchh-----hHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHH
Q 006938 209 SNETIAFLFGDMGAATPYT-TFE-RTQDE-----SISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIE 281 (625)
Q Consensus 209 ~~~~~f~v~GD~g~~~~~~-~~~-~~q~~-----s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~ 281 (625)
..+++++-+.|+|.+.... ... ..+.+ ..+|..-+-+.++ .++||||+++||+++.......-..+++.++
T Consensus 51 ~g~fKIlqvaDlH~g~g~~~~c~d~~p~~~~~csD~nTt~F~~rvL~--sE~PDlVVfTGD~i~g~~t~Da~~sl~kAva 128 (379)
T KOG1432|consen 51 DGTFKILQVADLHFGFGRETRCRDVLPSEEACCSDLNTTNFVSRVLA--SEKPDLVVFTGDNIFGHSTQDAATSLMKAVA 128 (379)
T ss_pred CCceEEEEeeccccccCCCccccccCcchhhhhcCccHHHHHHHHHh--ccCCCEEEEeCCcccccccHhHHHHHHHHhh
Confidence 3468899999998876511 110 11111 1234443433333 4799999999999987543333334566777
Q ss_pred Hh-hcCCceEEccCCCCCCC
Q 006938 282 PV-ASRVAYHVCIGNHEYDW 300 (625)
Q Consensus 282 ~~-~~~iP~~~v~GNHD~~~ 300 (625)
|. ..+|||.+++||||-..
T Consensus 129 P~I~~~IPwA~~lGNHDdes 148 (379)
T KOG1432|consen 129 PAIDRKIPWAAVLGNHDDES 148 (379)
T ss_pred hHhhcCCCeEEEeccccccc
Confidence 75 57899999999999864
No 32
>PF14008 Metallophos_C: Iron/zinc purple acid phosphatase-like protein C; PDB: 3KBP_B 1KBP_B 4KBP_C 2QFP_B 2QFR_A 1XZW_B.
Probab=99.18 E-value=4.2e-11 Score=95.57 Aligned_cols=61 Identities=38% Similarity=0.716 Sum_probs=39.8
Q ss_pred CCcEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCccceeeCcccEEEEEE-eCCEEEEEEEECCCCcEEEEE
Q 006938 466 AFPVHIVIGMAGQDWQPIWQPRPDHPDDPVFPQPMRSLYRGGEFGYTRLVA-TKEKLTLSYVGNHDGEVHDMV 537 (625)
Q Consensus 466 ~g~vyIv~G~gG~~~~~~~~~~~~~~~~~~~~~p~ws~~~~~~~Gy~~v~v-~~~~L~~~~i~~~dG~v~D~f 537 (625)
++||||++|+||+.+.... .++|+|++++...+||++|++ |.++|.++|+.+.+|+++|+|
T Consensus 1 kapVhiv~G~aG~~l~~~~-----------~~~~~wsa~r~~~~Gy~~l~v~N~T~l~~e~i~~~~g~v~D~f 62 (62)
T PF14008_consen 1 KAPVHIVVGAAGNGLDPFP-----------YPPPEWSAFRDSEYGYGRLTVANATHLHWEFIRSDDGSVLDEF 62 (62)
T ss_dssp TS-EEEEE--S-T----B------------SS--TTEEEEE---EEEEEEE-SSSEEEEEEEETTS-T-CEE-
T ss_pred CCCEEEEECcCCCCccccc-----------CCCCCeeeeeccccCEEEEEEEcCCeEEEEEEECCCCcEecCC
Confidence 4799999999999765432 257999999999999999985 899999999999999999997
No 33
>PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [].; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A ....
Probab=98.94 E-value=2.3e-08 Score=93.81 Aligned_cols=59 Identities=25% Similarity=0.406 Sum_probs=37.8
Q ss_pred eEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhcCCceEEc
Q 006938 213 IAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASRVAYHVC 292 (625)
Q Consensus 213 ~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~~iP~~~v 292 (625)
|++++||.+... ..++.+++.+ .+||+|+++||++.. .++++.++.+ |++++
T Consensus 2 ki~~~sD~H~~~-------------~~~~~~~~~~----~~~d~vi~~GDi~~~-------~~~~~~~~~~----~~~~v 53 (156)
T PF12850_consen 2 KIAVISDLHGNL-------------DALEAVLEYI----NEPDFVIILGDIFDP-------EEVLELLRDI----PVYVV 53 (156)
T ss_dssp EEEEEE--TTTH-------------HHHHHHHHHH----TTESEEEEES-SCSH-------HHHHHHHHHH----EEEEE
T ss_pred EEEEEeCCCCCh-------------hHHHHHHHHh----cCCCEEEECCCchhH-------HHHHHHHhcC----CEEEE
Confidence 789999998852 2344555544 469999999999762 4445555444 99999
Q ss_pred cCCCCCC
Q 006938 293 IGNHEYD 299 (625)
Q Consensus 293 ~GNHD~~ 299 (625)
.||||..
T Consensus 54 ~GNHD~~ 60 (156)
T PF12850_consen 54 RGNHDNW 60 (156)
T ss_dssp --CCHST
T ss_pred eCCcccc
Confidence 9999963
No 34
>cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain. Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me
Probab=98.89 E-value=1.4e-08 Score=91.00 Aligned_cols=46 Identities=26% Similarity=0.188 Sum_probs=33.3
Q ss_pred CCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhcCCceEEccCCCC
Q 006938 251 GDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASRVAYHVCIGNHE 297 (625)
Q Consensus 251 ~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~~iP~~~v~GNHD 297 (625)
+.++++|+++||+++...... +..+...........|+++++||||
T Consensus 24 ~~~~~~vi~~GD~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~GNHD 69 (131)
T cd00838 24 AEKPDFVLVLGDLVGDGPDPE-EVLAAALALLLLLGIPVYVVPGNHD 69 (131)
T ss_pred ccCCCEEEECCcccCCCCCch-HHHHHHHHHhhcCCCCEEEeCCCce
Confidence 478999999999998765433 3333223333457899999999998
No 35
>cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain. YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph
Probab=98.81 E-value=4.2e-08 Score=92.51 Aligned_cols=59 Identities=15% Similarity=0.192 Sum_probs=40.5
Q ss_pred eEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhcCCceEEc
Q 006938 213 IAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASRVAYHVC 292 (625)
Q Consensus 213 ~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~~iP~~~v 292 (625)
++++++|.+... ..++.+++.+ + ++|.|+++||+++...... +....|++.+
T Consensus 1 ~i~~isD~H~~~-------------~~~~~~~~~~---~-~~d~ii~~GD~~~~~~~~~-----------~~~~~~~~~V 52 (155)
T cd00841 1 KIGVISDTHGSL-------------ELLEKALELF---G-DVDLIIHAGDVLYPGPLNE-----------LELKAPVIAV 52 (155)
T ss_pred CEEEEecCCCCH-------------HHHHHHHHHh---c-CCCEEEECCccccccccch-----------hhcCCcEEEE
Confidence 478999998652 2334444433 2 3999999999987543211 3346799999
Q ss_pred cCCCCCC
Q 006938 293 IGNHEYD 299 (625)
Q Consensus 293 ~GNHD~~ 299 (625)
.||||..
T Consensus 53 ~GNhD~~ 59 (155)
T cd00841 53 RGNCDGE 59 (155)
T ss_pred eCCCCCc
Confidence 9999974
No 36
>KOG3770 consensus Acid sphingomyelinase and PHM5 phosphate metabolism protein [Lipid transport and metabolism]
Probab=98.78 E-value=5.6e-08 Score=107.03 Aligned_cols=191 Identities=14% Similarity=0.104 Sum_probs=109.0
Q ss_pred HHHHHHHHHHHHHhCCCCcEEEEcCccccCCCch----hh---HHHHHHhHHHhhcCCceEEccCCCCCCCCCCCCCCCC
Q 006938 237 ISTMKWILRDIEALGDKPAFVSHIGDISYARGYS----WL---WDEFFALIEPVASRVAYHVCIGNHEYDWPLQPWKPDW 309 (625)
Q Consensus 237 ~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~----~~---wd~f~~~l~~~~~~iP~~~v~GNHD~~~~~~~~~~~~ 309 (625)
..++..+++.|++...++|||+++||++-..... .. .....+.+......+|+++++||||....+ .|.+..
T Consensus 194 ~~lies~L~~ike~~~~iD~I~wTGD~~~H~~w~~t~~~~l~~~~~l~~~~~e~FpdvpvypalGNhe~~P~N-~F~~~~ 272 (577)
T KOG3770|consen 194 KRLIESALDHIKENHKDIDYIIWTGDNVAHDVWAQTEEENLSMLSRLTSLLSEYFPDVPVYPALGNHEIHPVN-LFAPGS 272 (577)
T ss_pred HHHHHHHHHHHHhcCCCCCEEEEeCCCCcccchhhhHHHHHHHHHHHHHHHHHhCCCCceeeecccCCCCcHh-hcCCCC
Confidence 4577888888887666699999999998665211 11 112234445556799999999999986322 222221
Q ss_pred CCCccCCCCCCccccccccccc--cCCCCCCCCCCCCCCCCCceEEEE-eCcEEEEEEeCCccc----------CCChHH
Q 006938 310 SYTVYGTDGGGECGVPYSLKFH--MPGNSLEPTGTRAPATRNLYYSFD-MGVVHFVYISTETNF----------LQGSNQ 376 (625)
Q Consensus 310 ~~~~Y~~d~gge~~~~y~~~f~--~P~~~~~~~G~~~~~~~~~yYsfd-~G~v~fI~LDT~~~~----------~~~~~Q 376 (625)
....+..+|.-+ .+...|. +|..... .-..+.||.-. +++.++|+||+..-+ .....|
T Consensus 273 ~~~~~~~~wly~---~~~~~W~~wlp~e~~~------t~~kga~Y~~~~~~Glr~IslNt~~c~~~N~~L~~n~tdp~~~ 343 (577)
T KOG3770|consen 273 VPKRHSQLWLYK---HLAGAWSTWLPAEAKE------TFLKGAYYLVLVIDGLRLISLNTNYCSAPNFWLYANQTDPIDQ 343 (577)
T ss_pred CcchhhhhHHHH---HHHhhhhccCCHHHHh------hhhcCcEEEEeecCCceEEEeccccccccceeeeecCCCchHH
Confidence 111011111000 0011111 2221110 11234566554 488999999986321 234788
Q ss_pred HHHHHHHhhccccCCCCeEEEEcccCCccCCCCCCChhhhHHHHHHHHHHHHHc--CceEEEEcCccCcee
Q 006938 377 YNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVEN--NVTLALWGHVHRYER 445 (625)
Q Consensus 377 ~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~~~d~~~~~~~~~~l~~l~~ky--~VdlvlsGH~H~yeR 445 (625)
++|+..+|.++..+..+ +-+++|.|+-.... . +.....+-.++.++ -+...|.||.|.-+-
T Consensus 344 lqWf~~~L~~ae~~Gek-Vhil~HIPpG~~~c-~------~~ws~~f~~iv~r~~~tI~gqf~GH~h~d~f 406 (577)
T KOG3770|consen 344 LQWFVDQLQEAESAGEK-VHILGHIPPGDGVC-L------EGWSINFYRIVNRFRSTIAGQFYGHTHIDEF 406 (577)
T ss_pred hhHHHHHHHHHHhcCCE-EEEEEeeCCCCcch-h------hhhhHHHHHHHHHHHHhhhhhccccCcceeE
Confidence 99999999987644433 77889999865221 1 11122334444444 244579999998653
No 37
>cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain. A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R
Probab=98.75 E-value=5.2e-08 Score=95.22 Aligned_cols=49 Identities=10% Similarity=0.117 Sum_probs=36.5
Q ss_pred CCCcEEEEcCccccCCCc--hhhHHHHHHhHHHh---hcCCceEEccCCCCCCC
Q 006938 252 DKPAFVSHIGDISYARGY--SWLWDEFFALIEPV---ASRVAYHVCIGNHEYDW 300 (625)
Q Consensus 252 ~~pdfvl~~GDivy~~g~--~~~wd~f~~~l~~~---~~~iP~~~v~GNHD~~~ 300 (625)
.+||+|+++||+++.+.. ..+|.+.++.+..+ ...+|++.++||||+.+
T Consensus 41 l~PD~Vi~lGDL~D~G~~~~~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHDIG~ 94 (195)
T cd08166 41 VQPDIVIFLGDLMDEGSIANDDEYYSYVQRFINIFEVPNGTKIIYLPGDNDIGG 94 (195)
T ss_pred cCCCEEEEeccccCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEEEECCCCCcCC
Confidence 589999999999987753 33455555555444 34699999999999963
No 38
>PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional
Probab=98.74 E-value=6.8e-08 Score=98.29 Aligned_cols=77 Identities=17% Similarity=0.173 Sum_probs=47.9
Q ss_pred eEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCC-C---chhhHHHHHHhHHHhhc-CC
Q 006938 213 IAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYAR-G---YSWLWDEFFALIEPVAS-RV 287 (625)
Q Consensus 213 ~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~-g---~~~~wd~f~~~l~~~~~-~i 287 (625)
++++++|+|.+... . ...+.+++.++....+||+|+++||+++.. + .........+.++.+.. .+
T Consensus 2 ~i~~iSDlHl~~~~-------~---~~~~~~~~~l~~~~~~~d~l~i~GDl~d~~~g~~~~~~~~~~~~~~l~~l~~~g~ 71 (241)
T PRK05340 2 PTLFISDLHLSPER-------P---AITAAFLRFLRGEARQADALYILGDLFEAWIGDDDPSPFAREIAAALKALSDSGV 71 (241)
T ss_pred cEEEEeecCCCCCC-------h---hHHHHHHHHHHhhhccCCEEEEccceeccccccCcCCHHHHHHHHHHHHHHHcCC
Confidence 57899999986431 1 112223333333346899999999998631 1 11222344455555543 48
Q ss_pred ceEEccCCCCCC
Q 006938 288 AYHVCIGNHEYD 299 (625)
Q Consensus 288 P~~~v~GNHD~~ 299 (625)
|+++++||||..
T Consensus 72 ~v~~v~GNHD~~ 83 (241)
T PRK05340 72 PCYFMHGNRDFL 83 (241)
T ss_pred eEEEEeCCCchh
Confidence 999999999974
No 39
>cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit
Probab=98.73 E-value=5e-08 Score=94.10 Aligned_cols=49 Identities=22% Similarity=0.350 Sum_probs=36.3
Q ss_pred CCCCcEEEEcCccccCCCc--hhhHHHHHHhHHHhh-------cCCceEEccCCCCCC
Q 006938 251 GDKPAFVSHIGDISYARGY--SWLWDEFFALIEPVA-------SRVAYHVCIGNHEYD 299 (625)
Q Consensus 251 ~~~pdfvl~~GDivy~~g~--~~~wd~f~~~l~~~~-------~~iP~~~v~GNHD~~ 299 (625)
..+||+|+++||++..... ...|.+..+.+..+. ..+|++.++||||+.
T Consensus 43 ~~~pd~vi~lGDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~g 100 (171)
T cd07384 43 RLKPDVVLFLGDLFDGGRIADSEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDIG 100 (171)
T ss_pred hcCCCEEEEeccccCCcEeCCHHHHHHHHHHHHHHhcccccccCCceEEEECCccccC
Confidence 3689999999999976532 245666555554443 278999999999985
No 40
>cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain. Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl
Probab=98.70 E-value=2.8e-06 Score=82.48 Aligned_cols=74 Identities=23% Similarity=0.252 Sum_probs=47.6
Q ss_pred HHHHHHHcCceEEEEcCccCceeeeccCCccccCCCCCCCCCCCCcEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCcc
Q 006938 423 LEPLFVENNVTLALWGHVHRYERFCPLNNFTCGSMGMDGEPSEAFPVHIVIGMAGQDWQPIWQPRPDHPDDPVFPQPMRS 502 (625)
Q Consensus 423 l~~l~~ky~VdlvlsGH~H~yeR~~p~~~~~~~~~~~~~~~~~~g~vyIv~G~gG~~~~~~~~~~~~~~~~~~~~~p~ws 502 (625)
+..++.+.++|++++||+|...... .++.+++.-|+.|....+. .
T Consensus 98 ~~~~~~~~~~dvii~GHTH~p~~~~-----------------~~g~~viNPGSv~~~~~~~----------------~-- 142 (178)
T cd07394 98 LAALQRQLDVDILISGHTHKFEAFE-----------------HEGKFFINPGSATGAFSPL----------------D-- 142 (178)
T ss_pred HHHHHHhcCCCEEEECCCCcceEEE-----------------ECCEEEEECCCCCCCCCCC----------------C--
Confidence 3445566889999999999865432 1456667777766432210 0
Q ss_pred ceeeCcccEEEEEEeCCEEEEEEEECCCCcE
Q 006938 503 LYRGGEFGYTRLVATKEKLTLSYVGNHDGEV 533 (625)
Q Consensus 503 ~~~~~~~Gy~~v~v~~~~L~~~~i~~~dG~v 533 (625)
......|++++++++.+.++++.-.++++
T Consensus 143 --~~~~~syail~~~~~~~~~~~~~l~~~~~ 171 (178)
T cd07394 143 --PNVIPSFVLMDIQGSKVVTYVYQLIDGEV 171 (178)
T ss_pred --CCCCCeEEEEEecCCeEEEEEEEEECCcE
Confidence 01123799999988888888886444443
No 41
>COG1408 Predicted phosphohydrolases [General function prediction only]
Probab=98.69 E-value=1.8e-07 Score=97.21 Aligned_cols=78 Identities=13% Similarity=0.170 Sum_probs=54.8
Q ss_pred CCcceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhcCCc
Q 006938 209 SNETIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASRVA 288 (625)
Q Consensus 209 ~~~~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~~iP 288 (625)
..+++++.++|.+..... ....+ .+..+. +..||+|+.+||+++. ..........+.++++.+..+
T Consensus 42 ~~~~~iv~lSDlH~~~~~----------~~~~~-~~~~i~--~~~~DlivltGD~~~~-~~~~~~~~~~~~L~~L~~~~g 107 (284)
T COG1408 42 LQGLKIVQLSDLHSLPFR----------EEKLA-LLIAIA--NELPDLIVLTGDYVDG-DRPPGVAALALFLAKLKAPLG 107 (284)
T ss_pred cCCeEEEEeehhhhchhh----------HHHHH-HHHHHH--hcCCCEEEEEeeeecC-CCCCCHHHHHHHHHhhhccCC
Confidence 356789999999987531 11122 222232 3567999999999984 122345566677788889999
Q ss_pred eEEccCCCCCCC
Q 006938 289 YHVCIGNHEYDW 300 (625)
Q Consensus 289 ~~~v~GNHD~~~ 300 (625)
++++.||||+..
T Consensus 108 v~av~GNHd~~~ 119 (284)
T COG1408 108 VFAVLGNHDYGV 119 (284)
T ss_pred EEEEeccccccc
Confidence 999999999964
No 42
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain. DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy
Probab=98.60 E-value=1.5e-06 Score=87.64 Aligned_cols=64 Identities=17% Similarity=0.318 Sum_probs=40.9
Q ss_pred ceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhcCCceEE
Q 006938 212 TIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASRVAYHV 291 (625)
Q Consensus 212 ~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~~iP~~~ 291 (625)
++++++||.|.... ... .+.+++ .+||+|+++||++... ...++.+..+ ..|+++
T Consensus 1 ~rIa~isDiHg~~~-----------~~~----~~~l~~--~~pD~Vl~~GDi~~~~------~~~~~~l~~l--~~p~~~ 55 (238)
T cd07397 1 LRIAIVGDVHGQWD-----------LED----IKALHL--LQPDLVLFVGDFGNES------VQLVRAISSL--PLPKAV 55 (238)
T ss_pred CEEEEEecCCCCch-----------HHH----HHHHhc--cCCCEEEECCCCCcCh------HHHHHHHHhC--CCCeEE
Confidence 47899999996421 001 122332 4799999999997421 1233333322 479999
Q ss_pred ccCCCCCCC
Q 006938 292 CIGNHEYDW 300 (625)
Q Consensus 292 v~GNHD~~~ 300 (625)
++||||...
T Consensus 56 V~GNHD~~~ 64 (238)
T cd07397 56 ILGNHDAWY 64 (238)
T ss_pred EcCCCcccc
Confidence 999999864
No 43
>cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain. 239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme
Probab=98.56 E-value=6e-07 Score=82.87 Aligned_cols=48 Identities=19% Similarity=0.198 Sum_probs=31.5
Q ss_pred EEEEcccCCccCCCCCCChhhhHHHHHHHHHHHHHcCceEEEEcCccCce
Q 006938 395 VVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVENNVTLALWGHVHRYE 444 (625)
Q Consensus 395 iIV~~H~P~y~~~~~~~d~~~~~~~~~~l~~l~~ky~VdlvlsGH~H~ye 444 (625)
.|++.|.|++......... ...-.+.+..++++++++++|+||+|...
T Consensus 70 ~ilv~H~~p~~~~~~~~~~--~~~g~~~~~~~~~~~~~~~~i~GH~H~~~ 117 (135)
T cd07379 70 DILVTHGPPYGHLDLVSSG--QRVGCEELLNRVQRVRPKLHVFGHIHEGY 117 (135)
T ss_pred EEEEECCCCCcCccccccC--cccCCHHHHHHHHHHCCcEEEEcCcCCcC
Confidence 6788899987653221110 00112456677788999999999999864
No 44
>cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain. MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to
Probab=98.56 E-value=3.2e-07 Score=87.13 Aligned_cols=48 Identities=21% Similarity=0.424 Sum_probs=35.4
Q ss_pred CCCcEEEEcCccccCCC--chhhHHHHHHhHHHhh---cCCceEEccCCCCCC
Q 006938 252 DKPAFVSHIGDISYARG--YSWLWDEFFALIEPVA---SRVAYHVCIGNHEYD 299 (625)
Q Consensus 252 ~~pdfvl~~GDivy~~g--~~~~wd~f~~~l~~~~---~~iP~~~v~GNHD~~ 299 (625)
.+||+|+++||++.... ....|..++..+..+. ..+|++.++||||..
T Consensus 37 ~~pd~vv~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD~~ 89 (156)
T cd08165 37 LQPDVVFVLGDLFDEGKWSTDEEWEDYVERFKKMFGHPPDLPLHVVVGNHDIG 89 (156)
T ss_pred cCCCEEEECCCCCCCCccCCHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCcC
Confidence 58999999999987543 2345666555554443 258999999999984
No 45
>TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown.
Probab=98.56 E-value=2.6e-06 Score=86.11 Aligned_cols=75 Identities=17% Similarity=0.143 Sum_probs=46.6
Q ss_pred EEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCC----CchhhHHHHHHhHHHhhc-CCce
Q 006938 215 FLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYAR----GYSWLWDEFFALIEPVAS-RVAY 289 (625)
Q Consensus 215 ~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~----g~~~~wd~f~~~l~~~~~-~iP~ 289 (625)
++++|.|.+... . ...+.+++.+.+...+||+|+++||+++.. ......+...+.++.+.. .+|+
T Consensus 2 ~~iSDlHl~~~~-------~---~~~~~~l~~l~~~~~~~d~lii~GDi~d~~~~~~~~~~~~~~~~~~l~~L~~~~~~v 71 (231)
T TIGR01854 2 LFISDLHLSPER-------P---DITALFLDFLREEARKADALYILGDLFEAWIGDDDPSTLARSVAQAIRQVSDQGVPC 71 (231)
T ss_pred eEEEecCCCCCC-------h---hHHHHHHHHHHhhhccCCEEEEcCceeccccCCCCCCHHHHHHHHHHHHHHHCCCeE
Confidence 578999987431 1 112334444444334899999999998631 111222334445555543 5899
Q ss_pred EEccCCCCCC
Q 006938 290 HVCIGNHEYD 299 (625)
Q Consensus 290 ~~v~GNHD~~ 299 (625)
++++||||+.
T Consensus 72 ~~v~GNHD~~ 81 (231)
T TIGR01854 72 YFMHGNRDFL 81 (231)
T ss_pred EEEcCCCchh
Confidence 9999999974
No 46
>cd07389 MPP_PhoD Bacillus subtilis PhoD and related proteins, metallophosphatase domain. PhoD (also known as alkaline phosphatase D/APaseD in Bacillus subtilis) is a secreted phosphodiesterase encoded by phoD of the Pho regulon in Bacillus subtilis. PhoD homologs are found in prokaryotes, eukaryotes, and archaea. PhoD contains a twin arginine (RR) motif and is transported by the Tat (Twin-arginine translocation) translocation pathway machinery (TatAyCy). This family also includes the Fusarium oxysporum Fso1 protein. PhoD belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF
Probab=98.55 E-value=2.3e-07 Score=93.31 Aligned_cols=147 Identities=16% Similarity=0.113 Sum_probs=83.9
Q ss_pred CCCCcEEEEcCccccCCCc------------------h---hh----HHHH--HHhHHHhhcCCceEEccCCCCCCCCCC
Q 006938 251 GDKPAFVSHIGDISYARGY------------------S---WL----WDEF--FALIEPVASRVAYHVCIGNHEYDWPLQ 303 (625)
Q Consensus 251 ~~~pdfvl~~GDivy~~g~------------------~---~~----wd~f--~~~l~~~~~~iP~~~v~GNHD~~~~~~ 303 (625)
+.+|||+|++||.+|.+.. . .. |..+ ...++.+.+.+|++.++.+||+..+..
T Consensus 27 ~~~~d~~l~~GD~IY~d~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~Y~~~~~~p~~~~~~~~~p~~~iwDDHDi~~n~~ 106 (228)
T cd07389 27 EEDPDLFLHLGDQIYADDVGGLMPALIEGRPLEPAHEALTLEEYRERYRQYRSDPDLQRLLAQVPTIGIWDDHDIGDNWG 106 (228)
T ss_pred ccCCCEEEEcCCeecccCCCcccccccCCcCcCCcccccCHHHHHHHHHHHcCCHHHHHHhhcCCEEEeccccccccccc
Confidence 4799999999999998842 1 11 1122 122456678999999999999974321
Q ss_pred CCCCCCCCCccCCCCC----CccccccccccccCCCCCCCCCCCCCCCCCceEEEEeCcE-EEEEEeCCcccCCChHHHH
Q 006938 304 PWKPDWSYTVYGTDGG----GECGVPYSLKFHMPGNSLEPTGTRAPATRNLYYSFDMGVV-HFVYISTETNFLQGSNQYN 378 (625)
Q Consensus 304 ~~~~~~~~~~Y~~d~g----ge~~~~y~~~f~~P~~~~~~~G~~~~~~~~~yYsfd~G~v-~fI~LDT~~~~~~~~~Q~~ 378 (625)
...+.. ...... ......|......+..... . ......|++|.+|.. .|++||+....
T Consensus 107 ~~~~~~----~~~~~~~~~~~~a~~ay~e~~~~~~~~~~--~---~~~~~~y~~~~~G~~~~~~~lD~R~~R-------- 169 (228)
T cd07389 107 GDGAWV----QDSPVFYARKAAARQAYLEFQPVRNPSPR--R---GGRGGIYRSFRFGDLVDLILLDTRTYR-------- 169 (228)
T ss_pred cccccc----cCcchHHHHHHHHHHHHHHHcCCCCCCcc--C---CCCceEEEEEecCCcceEEEEeccccc--------
Confidence 100000 000000 0011123333332222110 0 023568999999996 99999998653
Q ss_pred HHHHHhhccccCCCCeEEEEcccCCccCCCCCCChhhhHHHHHHHHHHHHHcCc--eEEEEcCccCceee
Q 006938 379 FIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVENNV--TLALWGHVHRYERF 446 (625)
Q Consensus 379 WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~~~d~~~~~~~~~~l~~l~~ky~V--dlvlsGH~H~yeR~ 446 (625)
+.+......++++..++.+.++ -++|||++|..+..
T Consensus 170 --------------------------------d~W~~~~~er~~l~~~~~~~~~~~vv~lSGDvH~~~~~ 207 (228)
T cd07389 170 --------------------------------DSWDGYPAERERLLDLLAKRKIKNVVFLSGDVHLAEAS 207 (228)
T ss_pred --------------------------------ccccccHHHHHHHHHHHHHhCCCCeEEEecHHHHHHHh
Confidence 1222234456777777665543 37899999986544
No 47
>cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain. Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the
Probab=98.54 E-value=4.8e-07 Score=88.33 Aligned_cols=61 Identities=15% Similarity=0.087 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHhCCCCcEEEEcCccccCCC-chhhHHHHHHhHHHhh--------------------cCCceEEccCCCC
Q 006938 239 TMKWILRDIEALGDKPAFVSHIGDISYARG-YSWLWDEFFALIEPVA--------------------SRVAYHVCIGNHE 297 (625)
Q Consensus 239 tl~~i~~~i~~~~~~pdfvl~~GDivy~~g-~~~~wd~f~~~l~~~~--------------------~~iP~~~v~GNHD 297 (625)
-++.+.+.+.. .-+||.|+++||++...- ..++|.+..+.+..+. ..+|++.++||||
T Consensus 31 YL~~~~~~~~~-~l~Pd~V~fLGDLfd~~w~~D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~i~~i~V~GNHD 109 (193)
T cd08164 31 FLGHIVSMMQF-WLKPDAVVVLGDLFSSQWIDDEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGKTPLINIAGNHD 109 (193)
T ss_pred HHHHHHHHHHH-hcCCCEEEEeccccCCCcccHHHHHHHHHHHHHHhcCCcccccccccccccccccCCceEEEECCccc
Confidence 34555555443 369999999999985421 2344544333333221 1489999999999
Q ss_pred CCC
Q 006938 298 YDW 300 (625)
Q Consensus 298 ~~~ 300 (625)
+..
T Consensus 110 IG~ 112 (193)
T cd08164 110 VGY 112 (193)
T ss_pred CCC
Confidence 963
No 48
>PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A.
Probab=98.53 E-value=1.1e-06 Score=86.35 Aligned_cols=177 Identities=15% Similarity=0.166 Sum_probs=88.5
Q ss_pred eEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHH------------------
Q 006938 213 IAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWD------------------ 274 (625)
Q Consensus 213 ~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd------------------ 274 (625)
++++++|.... .+.+..+.+.+.+. +||.|+++||+.-......+|.
T Consensus 7 kilA~s~~~g~-------------~e~l~~l~~~~~e~--~~D~~v~~G~~~~~~a~~~e~~~a~~~~r~p~k~~i~~e~ 71 (255)
T PF14582_consen 7 KILAISNFRGD-------------FELLERLVEVIPEK--GPDAVVFVGDLLKAEARSDEYERAQEEQREPDKSEINEEE 71 (255)
T ss_dssp EEEEEE--TT--------------HHHHHHHHHHHHHH--T-SEEEEES-SS-TCHHHHHHHHHHHTT----THHHHHHH
T ss_pred hheeecCcchH-------------HHHHHHHHhhcccc--CCCEEEEeccccccchhhhHHHHHhhhccCcchhhhhhhh
Confidence 57788887543 34566666666653 8999999999987665556666
Q ss_pred --------HHHHhHHHhhcCCceEEccCCCCCCCCCCCCCCCCCCCccCCCCCCccccccccccccCCCCCCCCCCCCCC
Q 006938 275 --------EFFALIEPVASRVAYHVCIGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKFHMPGNSLEPTGTRAPA 346 (625)
Q Consensus 275 --------~f~~~l~~~~~~iP~~~v~GNHD~~~~~~~~~~~~~~~~Y~~d~gge~~~~y~~~f~~P~~~~~~~G~~~~~ 346 (625)
.||+.+.. ..+|.+++|||||.... .|-. .+|....-.|.-- +
T Consensus 72 ~~~~e~~~~ff~~L~~--~~~p~~~vPG~~Dap~~-----------~~lr-------~a~~~e~v~p~~~----~----- 122 (255)
T PF14582_consen 72 CYDSEALDKFFRILGE--LGVPVFVVPGNMDAPER-----------FFLR-------EAYNAEIVTPHIH----N----- 122 (255)
T ss_dssp HHHHHHHHHHHHHHHC--C-SEEEEE--TTS-SHH-----------HHHH-------HHHHCCCC-TTEE----E-----
T ss_pred hhhHHHHHHHHHHHHh--cCCcEEEecCCCCchHH-----------HHHH-------HHhccceecccee----e-----
Confidence 55555543 58999999999997310 0100 0011000011000 0
Q ss_pred CCCceEEEEeCcEEEEEEeCCc---ccCC------ChHHHHHHHHHhhccccCCCCeEEEEcccCC-ccCCCCCCChhhh
Q 006938 347 TRNLYYSFDMGVVHFVYISTET---NFLQ------GSNQYNFIKHDLESVDRKKTPFVVVQGHRPM-YTTSNENRDAPLR 416 (625)
Q Consensus 347 ~~~~yYsfd~G~v~fI~LDT~~---~~~~------~~~Q~~WL~~~L~~~~r~~~~wiIV~~H~P~-y~~~~~~~d~~~~ 416 (625)
-..-+.+.-|.+.|+.+--+- .... -....+|..+.|..++ +.+ +|+++|.|+ +..+.....
T Consensus 123 -vH~sf~~~~g~y~v~G~GGeI~~~~~~~~~~LrYP~weaey~lk~l~elk--~~r-~IlLfhtpPd~~kg~~h~G---- 194 (255)
T PF14582_consen 123 -VHESFFFWKGEYLVAGMGGEITDDQREEEFKLRYPAWEAEYSLKFLRELK--DYR-KILLFHTPPDLHKGLIHVG---- 194 (255)
T ss_dssp --CTCEEEETTTEEEEEE-SEEESSS-BCSSS-EEEHHHHHHHHGGGGGCT--SSE-EEEEESS-BTBCTCTBTTS----
T ss_pred -eeeeecccCCcEEEEecCccccCCCccccccccchHHHHHHHHHHHHhcc--ccc-EEEEEecCCccCCCccccc----
Confidence 001122333456677664321 1000 1234456666676643 223 788899999 443322221
Q ss_pred HHHHHHHHHHHHHcCceEEEEcCccCce
Q 006938 417 NRMLEHLEPLFVENNVTLALWGHVHRYE 444 (625)
Q Consensus 417 ~~~~~~l~~l~~ky~VdlvlsGH~H~ye 444 (625)
.+.+..++++|+.++||+||.|--.
T Consensus 195 ---S~~V~dlIk~~~P~ivl~Ghihe~~ 219 (255)
T PF14582_consen 195 ---SAAVRDLIKTYNPDIVLCGHIHESH 219 (255)
T ss_dssp ---BHHHHHHHHHH--SEEEE-SSS-EE
T ss_pred ---HHHHHHHHHhcCCcEEEecccccch
Confidence 2457789999999999999999744
No 49
>COG1768 Predicted phosphohydrolase [General function prediction only]
Probab=98.49 E-value=3.8e-06 Score=79.28 Aligned_cols=69 Identities=17% Similarity=0.250 Sum_probs=47.4
Q ss_pred CCCCeEEEEcccCCccCCCCCCChhhhHHHHHHHHHHHHHcCceEEEEcCccCceeeeccCCccccCCCCCCCCCCCCcE
Q 006938 390 KKTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVENNVTLALWGHVHRYERFCPLNNFTCGSMGMDGEPSEAFPV 469 (625)
Q Consensus 390 ~~~~wiIV~~H~P~y~~~~~~~d~~~~~~~~~~l~~l~~ky~VdlvlsGH~H~yeR~~p~~~~~~~~~~~~~~~~~~g~v 469 (625)
+...-.||+.|.|++++..... .+.+++++++|+.++.||.|.-.|-.+ .+.. -.|+-
T Consensus 156 k~~~~fivM~HYPP~s~~~t~~----------~~sevlee~rv~~~lyGHlHgv~~p~~--~~s~----------v~Gi~ 213 (230)
T COG1768 156 KGVSKFIVMTHYPPFSDDGTPG----------PFSEVLEEGRVSKCLYGHLHGVPRPNI--GFSN----------VRGIE 213 (230)
T ss_pred cCcCeEEEEEecCCCCCCCCCc----------chHHHHhhcceeeEEeeeccCCCCCCC--Cccc----------ccCce
Confidence 4445588999999998765432 355678899999999999999776432 1111 25777
Q ss_pred EEEECCCCCCC
Q 006938 470 HIVIGMAGQDW 480 (625)
Q Consensus 470 yIv~G~gG~~~ 480 (625)
|+.+.+-+-.+
T Consensus 214 y~LvaaDyv~F 224 (230)
T COG1768 214 YMLVAADYVEF 224 (230)
T ss_pred EEEEeccceee
Confidence 87776555443
No 50
>TIGR00040 yfcE phosphoesterase, MJ0936 family. Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required.
Probab=98.49 E-value=3.6e-06 Score=79.86 Aligned_cols=62 Identities=13% Similarity=0.143 Sum_probs=39.6
Q ss_pred eEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhcCCceEEc
Q 006938 213 IAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASRVAYHVC 292 (625)
Q Consensus 213 ~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~~iP~~~v 292 (625)
++++++|+|.... .++.+.+.++. ..++|.|+++||++. . ...+.++.+ ..|++++
T Consensus 2 ~i~viSD~H~~~~-------------~~~~~~~~~~~-~~~~d~ii~~GD~~~----~----~~~~~l~~~--~~~~~~V 57 (158)
T TIGR00040 2 KILVISDTHGPLR-------------ATELPVELFNL-ESNVDLVIHAGDLTS----P----FVLKEFEDL--AAKVIAV 57 (158)
T ss_pred EEEEEecccCCcc-------------hhHhHHHHHhh-ccCCCEEEEcCCCCC----H----HHHHHHHHh--CCceEEE
Confidence 6899999986421 12233333332 237999999999972 1 122333322 4689999
Q ss_pred cCCCCC
Q 006938 293 IGNHEY 298 (625)
Q Consensus 293 ~GNHD~ 298 (625)
.||||.
T Consensus 58 ~GN~D~ 63 (158)
T TIGR00040 58 RGNNDG 63 (158)
T ss_pred ccCCCc
Confidence 999996
No 51
>COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only]
Probab=98.46 E-value=1e-05 Score=79.74 Aligned_cols=176 Identities=17% Similarity=0.206 Sum_probs=97.4
Q ss_pred cceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCcccc--CCCchhhHHHHHHhHHHhh-cCC
Q 006938 211 ETIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISY--ARGYSWLWDEFFALIEPVA-SRV 287 (625)
Q Consensus 211 ~~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy--~~g~~~~wd~f~~~l~~~~-~~i 287 (625)
..+++++.|.+... ..++++.+.++. .++|+++.+||++| .+..... .+-. .++.+. ..+
T Consensus 3 ~mkil~vtDlHg~~-------------~~~~k~~~~~~~--~~~D~lviaGDlt~~~~~~~~~~-~~~~-~~e~l~~~~~ 65 (226)
T COG2129 3 KMKILAVTDLHGSE-------------DSLKKLLNAAAD--IRADLLVIAGDLTYFHFGPKEVA-EELN-KLEALKELGI 65 (226)
T ss_pred cceEEEEeccccch-------------HHHHHHHHHHhh--ccCCEEEEecceehhhcCchHHH-Hhhh-HHHHHHhcCC
Confidence 35789999998863 123444443332 48999999999993 3322111 1100 033443 689
Q ss_pred ceEEccCCCCCCCCCCCCCCCCCCCccCCCCCCccccccccccccCCCCCCCCCCCCCCCCCceEEEEeCcEEEEEEeCC
Q 006938 288 AYHVCIGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKFHMPGNSLEPTGTRAPATRNLYYSFDMGVVHFVYISTE 367 (625)
Q Consensus 288 P~~~v~GNHD~~~~~~~~~~~~~~~~Y~~d~gge~~~~y~~~f~~P~~~~~~~G~~~~~~~~~yYsfd~G~v~fI~LDT~ 367 (625)
|+++++||-|-..-. . ..... |.. ..+ -..+++++.|+.+--.
T Consensus 66 ~v~avpGNcD~~~v~------------~----------~l~~~----------~~~---v~~--~v~~i~~~~~~G~Ggs 108 (226)
T COG2129 66 PVLAVPGNCDPPEVI------------D----------VLKNA----------GVN---VHG--RVVEIGGYGFVGFGGS 108 (226)
T ss_pred eEEEEcCCCChHHHH------------H----------HHHhc----------ccc---ccc--ceEEecCcEEEEeccc
Confidence 999999998853100 0 00000 000 001 3467777777774211
Q ss_pred --ccc----CCChH-HHHHHHHHhhccccCCCCeEEEEcccCCccCCCCCCChhhhHHHHHHHHHHHHHcCceEEEEcCc
Q 006938 368 --TNF----LQGSN-QYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVENNVTLALWGHV 440 (625)
Q Consensus 368 --~~~----~~~~~-Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~~~d~~~~~~~~~~l~~l~~ky~VdlvlsGH~ 440 (625)
+.+ .-.++ -+.-|++-+...+ +.. .|+++|.|+|....+.. ......-.+.+..++++.++-+.+|||.
T Consensus 109 n~tp~nt~~e~~E~~I~s~l~~~v~~~~-~~~--~Il~~HaPP~gt~~d~~-~g~~hvGS~~vr~~ieefqP~l~i~GHI 184 (226)
T COG2129 109 NPTPFNTPREFSEDEIYSKLKSLVKKAD-NPV--NILLTHAPPYGTLLDTP-SGYVHVGSKAVRKLIEEFQPLLGLHGHI 184 (226)
T ss_pred CCCCCCCccccCHHHHHHHHHHHHhccc-Ccc--eEEEecCCCCCccccCC-CCccccchHHHHHHHHHhCCceEEEeee
Confidence 111 11222 3334444444432 111 39999999998654321 1101112457778999999999999999
Q ss_pred cCce
Q 006938 441 HRYE 444 (625)
Q Consensus 441 H~ye 444 (625)
|-+.
T Consensus 185 HEs~ 188 (226)
T COG2129 185 HESR 188 (226)
T ss_pred cccc
Confidence 9844
No 52
>PRK09453 phosphodiesterase; Provisional
Probab=98.42 E-value=1.8e-05 Score=76.88 Aligned_cols=70 Identities=13% Similarity=0.170 Sum_probs=44.3
Q ss_pred eEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCch-----hhHHHHHHhHHHhhcCC
Q 006938 213 IAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYS-----WLWDEFFALIEPVASRV 287 (625)
Q Consensus 213 ~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~-----~~wd~f~~~l~~~~~~i 287 (625)
++++++|.|... ..++.+++.+++ .++|.|+++||++..+... ...++..+.++. ...
T Consensus 2 ri~viSD~Hg~~-------------~~~~~~l~~~~~--~~~d~ii~lGDi~~~~~~~~~~~~~~~~~~~~~l~~--~~~ 64 (182)
T PRK09453 2 KLMFASDTHGSL-------------PATEKALELFAQ--SGADWLVHLGDVLYHGPRNPLPEGYAPKKVAELLNA--YAD 64 (182)
T ss_pred eEEEEEeccCCH-------------HHHHHHHHHHHh--cCCCEEEEcccccccCcCCCCccccCHHHHHHHHHh--cCC
Confidence 689999999541 234455555543 5899999999998643211 011223333332 246
Q ss_pred ceEEccCCCCCC
Q 006938 288 AYHVCIGNHEYD 299 (625)
Q Consensus 288 P~~~v~GNHD~~ 299 (625)
|++++.||||..
T Consensus 65 ~v~~V~GNhD~~ 76 (182)
T PRK09453 65 KIIAVRGNCDSE 76 (182)
T ss_pred ceEEEccCCcch
Confidence 899999999964
No 53
>TIGR00583 mre11 DNA repair protein (mre11). All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria.
Probab=98.38 E-value=2.8e-05 Score=84.72 Aligned_cols=87 Identities=11% Similarity=0.034 Sum_probs=55.4
Q ss_pred CcceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCc-hhhHHHHHHhHHH------
Q 006938 210 NETIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGY-SWLWDEFFALIEP------ 282 (625)
Q Consensus 210 ~~~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~-~~~wd~f~~~l~~------ 282 (625)
+..+|++++|+|.+-...... .......+++.+++.+. ..++|+||++||++..... ......+++.++.
T Consensus 2 ~~mKIlh~SD~HlG~~~~~~~-r~~D~~~~f~eil~~a~--~~~vD~VLiaGDLFd~~~Ps~~~~~~~~~~lr~~~~g~~ 78 (405)
T TIGR00583 2 DTIRILVSTDNHVGYGENDPV-RGDDSWNTFEEVLQIAK--EQDVDMILLGGDLFHENKPSRKSLYQVLRSLRLYCLGDK 78 (405)
T ss_pred CceEEEEEcCCCCCCccCCch-hhhhHHHHHHHHHHHHH--HcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHhhccCC
Confidence 457899999999873321111 12234556777777654 3689999999999876543 2222223333332
Q ss_pred ------h----------------------hcCCceEEccCCCCCC
Q 006938 283 ------V----------------------ASRVAYHVCIGNHEYD 299 (625)
Q Consensus 283 ------~----------------------~~~iP~~~v~GNHD~~ 299 (625)
+ ...+|++++.||||..
T Consensus 79 p~~~~~Lsd~~~~~~~~~~~~~ny~d~~~~~~iPVf~I~GNHD~p 123 (405)
T TIGR00583 79 PCELEFLSDASVVFNQSAFGNVNYEDPNINVAIPVFSIHGNHDDP 123 (405)
T ss_pred ccchhhccchhhhcccccccccccccccccCCCCEEEEcCCCCCc
Confidence 0 1379999999999974
No 54
>cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain. YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l
Probab=98.26 E-value=6.6e-06 Score=81.82 Aligned_cols=48 Identities=19% Similarity=0.081 Sum_probs=32.0
Q ss_pred CCCcEEEEcCccccCCC-----chhhHHHH-HHhHHHhhcCCceEEccCCCCCC
Q 006938 252 DKPAFVSHIGDISYARG-----YSWLWDEF-FALIEPVASRVAYHVCIGNHEYD 299 (625)
Q Consensus 252 ~~pdfvl~~GDivy~~g-----~~~~wd~f-~~~l~~~~~~iP~~~v~GNHD~~ 299 (625)
.+|+.++++||+++... ........ ...++......+++.++||||..
T Consensus 29 ~~~~~lvl~GDi~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~v~GNHD~~ 82 (217)
T cd07398 29 GEADALYLLGDIFDLWFGDDEVVPPAAHEVLAALLRLADRGTRVYYVPGNHDFL 82 (217)
T ss_pred CCCCEEEEeccEEEEEecCCCCCChHHHHHHHHHHHHHHCCCeEEEECCCchHH
Confidence 58999999999986321 11112221 23334446789999999999985
No 55
>cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain. CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos
Probab=98.24 E-value=3.9e-05 Score=79.66 Aligned_cols=59 Identities=22% Similarity=0.130 Sum_probs=34.4
Q ss_pred HHHHHHHhhccccCCCCeEEEEcccCCccCCCCCCChhhhHHHHHHHHHHHHH-cCceEEEEcCccCce
Q 006938 377 YNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVE-NNVTLALWGHVHRYE 444 (625)
Q Consensus 377 ~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~~~d~~~~~~~~~~l~~l~~k-y~VdlvlsGH~H~ye 444 (625)
.++..++|++ .++..+|+++|............ . ......|.++ .+||++|+||.|...
T Consensus 172 ~~~~v~~lr~---~~~D~IIvl~H~g~~~~~~~~~~---~---~~~~~~la~~~~~vD~IlgGHsH~~~ 231 (277)
T cd07410 172 AKKYVPKLRA---EGADVVVVLAHGGFERDLEESLT---G---ENAAYELAEEVPGIDAILTGHQHRRF 231 (277)
T ss_pred HHHHHHHHHH---cCCCEEEEEecCCcCCCcccccC---C---ccHHHHHHhcCCCCcEEEeCCCcccc
Confidence 4444445543 46778999999987653210000 0 1111234444 489999999999754
No 56
>cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain. TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.24 E-value=5.6e-06 Score=76.05 Aligned_cols=26 Identities=19% Similarity=0.225 Sum_probs=20.7
Q ss_pred HHHHHHHHHcCceEEEEcCccCceee
Q 006938 421 EHLEPLFVENNVTLALWGHVHRYERF 446 (625)
Q Consensus 421 ~~l~~l~~ky~VdlvlsGH~H~yeR~ 446 (625)
+.+..++.+++++++|+||.|.....
T Consensus 81 ~~l~~~l~~~~~~~vl~GH~H~~~~~ 106 (129)
T cd07403 81 EAFLDFIDRFRPKLFIHGHTHLNYGY 106 (129)
T ss_pred HHHHHHHHHHCCcEEEEcCcCCCcCc
Confidence 45667778889999999999986544
No 57
>cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain. This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich
Probab=98.23 E-value=2.5e-05 Score=79.74 Aligned_cols=82 Identities=18% Similarity=0.101 Sum_probs=45.1
Q ss_pred ceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCc-EEEEcCccccCCCchhhHHHHHHhHHHhhcCCceE
Q 006938 212 TIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPA-FVSHIGDISYARGYSWLWDEFFALIEPVASRVAYH 290 (625)
Q Consensus 212 ~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pd-fvl~~GDivy~~g~~~~wd~f~~~l~~~~~~iP~~ 290 (625)
++++.++|++..-.. . .+......++.+++++++ .+|| +++.+||++....... +......++.+...-+-+
T Consensus 1 l~i~~~sD~hg~~~~--~--~~~~g~~~l~~~v~~~~~--~~~~~l~v~~GD~~~~~~~~~-~~~~~~~~~~l~~~g~d~ 73 (252)
T cd00845 1 LTILHTNDLHGHFEP--A--GGVGGAARLATLIKEERA--ENENTLLLDAGDNFDGSPPST-ATKGEANIELMNALGYDA 73 (252)
T ss_pred CEEEEecccccCccc--c--CCcCCHHHHHHHHHHHHh--cCCCeEEEeCCccCCCccchh-ccCCcHHHHHHHhcCCCE
Confidence 368899999844210 0 011224455666666654 3567 8899999986543221 111111222222223456
Q ss_pred EccCCCCCCC
Q 006938 291 VCIGNHEYDW 300 (625)
Q Consensus 291 ~v~GNHD~~~ 300 (625)
+++||||++.
T Consensus 74 ~~~GNHe~d~ 83 (252)
T cd00845 74 VTIGNHEFDY 83 (252)
T ss_pred Eeeccccccc
Confidence 7789999863
No 58
>cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain. CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th
Probab=98.13 E-value=4.1e-05 Score=78.73 Aligned_cols=191 Identities=16% Similarity=0.223 Sum_probs=88.9
Q ss_pred eEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCc-EEEEcCccccCCCchh--hHHHHHHhHHHhhcCCce
Q 006938 213 IAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPA-FVSHIGDISYARGYSW--LWDEFFALIEPVASRVAY 289 (625)
Q Consensus 213 ~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pd-fvl~~GDivy~~g~~~--~wd~f~~~l~~~~~~iP~ 289 (625)
+++.+.|.+.-.+. ... +......++.+++.+++ .+|+ +++.+||++....... +.+..++.++.+ . .-
T Consensus 2 ~il~~nd~~~~~~~-~~~--~~gG~~rl~~~i~~~r~--~~~~~l~l~~GD~~~g~~~~~~~~g~~~~~~l~~l--~-~d 73 (257)
T cd07406 2 TILHFNDVYEIAPL-DGG--PVGGAARFATLRKQLRK--ENPNTLVLFSGDVLSPSLLSTATKGKQMVPVLNAL--G-VD 73 (257)
T ss_pred eEEEEccceeeccc-CCC--CcCCHHHHHHHHHHHHh--cCCCEEEEECCCccCCccchhhcCCccHHHHHHhc--C-Cc
Confidence 56777777632110 000 11124456666666654 3566 9999999975432111 111122222211 2 23
Q ss_pred EEccCCCCCCCCCCCCCCCCCCCccCCCCCCcccccccc-ccccCCCCCCCCCCCCCCCCCceEEEEeCcEE--EEEEeC
Q 006938 290 HVCIGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSL-KFHMPGNSLEPTGTRAPATRNLYYSFDMGVVH--FVYIST 366 (625)
Q Consensus 290 ~~v~GNHD~~~~~~~~~~~~~~~~Y~~d~gge~~~~y~~-~f~~P~~~~~~~G~~~~~~~~~yYsfd~G~v~--fI~LDT 366 (625)
+.++||||++.....+. . .+. +...++.. ....... +. ....-+.|.-++.++++ |+.+.+
T Consensus 74 ~~~~GNHefd~g~~~l~----~-~~~-----~~~~~~L~aNi~~~~~-----~~-~~~~~~~~~i~~~~g~kIgviG~~~ 137 (257)
T cd07406 74 LACFGNHEFDFGEDQLQ----K-RLG-----ESKFPWLSSNVFDATG-----GG-PLPNGKESAIIERAGVKIGLLGLVE 137 (257)
T ss_pred EEeecccccccCHHHHH----H-HHh-----hCCCCEEEEEEEECCC-----Cc-ccCCCCCeEEEEECCeEEEEEEEec
Confidence 66899999963210000 0 000 00001100 0000000 00 00012357778888865 455544
Q ss_pred Cccc------CC---ChHHHHHHHHHhhccccCCCCeEEEEcccCCccCCCCCCChhhhHHHHHHHHHHHHH-cCceEEE
Q 006938 367 ETNF------LQ---GSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVE-NNVTLAL 436 (625)
Q Consensus 367 ~~~~------~~---~~~Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~~~d~~~~~~~~~~l~~l~~k-y~Vdlvl 436 (625)
.... .. -.+-.+.+++.+++..+.++..+|++.|.+... + . .+.++ .+||++|
T Consensus 138 ~~~~~~~~~~~~~~~~~d~~~~~~~~v~~~~~~~~D~iVvl~H~g~~~------d----~-------~la~~~~~iD~Il 200 (257)
T cd07406 138 EEWLETLTIDPEYVRYRDYVETARELVDELREQGADLIIALTHMRLPN------D----K-------RLAREVPEIDLIL 200 (257)
T ss_pred ccccccccCCCCcceEcCHHHHHHHHHHHHHhCCCCEEEEEeccCchh------h----H-------HHHHhCCCCceEE
Confidence 3110 00 112233344444333335678899999987521 1 1 12222 4899999
Q ss_pred EcCccCce
Q 006938 437 WGHVHRYE 444 (625)
Q Consensus 437 sGH~H~ye 444 (625)
+||.|...
T Consensus 201 gGH~H~~~ 208 (257)
T cd07406 201 GGHDHEYI 208 (257)
T ss_pred ecccceeE
Confidence 99999866
No 59
>cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain. Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s
Probab=98.11 E-value=8.8e-05 Score=76.37 Aligned_cols=55 Identities=13% Similarity=0.061 Sum_probs=36.7
Q ss_pred EEEEcccCCccCCCCCCCh-------hhh------HHHHHHHHHHHHHcCceEEEEcCccC-ceeeecc
Q 006938 395 VVVQGHRPMYTTSNENRDA-------PLR------NRMLEHLEPLFVENNVTLALWGHVHR-YERFCPL 449 (625)
Q Consensus 395 iIV~~H~P~y~~~~~~~d~-------~~~------~~~~~~l~~l~~ky~VdlvlsGH~H~-yeR~~p~ 449 (625)
=|+++|.|+.......... .+. ..-...+..++++.+...+|+||.|. |++..|-
T Consensus 167 DIlLSHdWP~gI~~~~~~~~l~~~~~~~~~~~~~~~~Gs~~~~~ll~~lkPryhf~gH~H~~f~~~~~~ 235 (262)
T cd00844 167 DIFLSHDWPRGIYKHGDKKQLLRKKPFFRQDIESGTLGSPAAEELLKHLKPRYWFSAHLHVKFAALVPH 235 (262)
T ss_pred cEEEeCCCCcchhhccchHHhhhcCccchhcccccCCCCHHHHHHHHHhCCCEEEEecCCcccceecCC
Confidence 5888999998764433210 000 00124577899999999999999999 7766543
No 60
>cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain. YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi
Probab=98.07 E-value=0.00018 Score=75.21 Aligned_cols=86 Identities=15% Similarity=0.117 Sum_probs=43.5
Q ss_pred eEEEEEecCCCCCCCcc-cccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhcCCce-E
Q 006938 213 IAFLFGDMGAATPYTTF-ERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASRVAY-H 290 (625)
Q Consensus 213 ~f~v~GD~g~~~~~~~~-~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~~iP~-~ 290 (625)
+++.+.|+|..-....+ ...+......++.+++++++. ....+++.+||++........+..--..++ ++..+.+ +
T Consensus 2 ~il~tnD~Hg~~~~~~~~~~~~~gG~arl~~~i~~~r~~-~~~~l~ld~GD~~~gs~~~s~~~~g~~~~~-~~n~~g~Da 79 (288)
T cd07412 2 QILAINDFHGRLEPPGKVVTVPAGGAAYLAAYLDEARAQ-NPNSLFVSAGDLIGASPFESALLQDEPTIE-ALNAMGVDA 79 (288)
T ss_pred eEEEEeccccCccCCCCccccccccHHHHHHHHHHHHhc-CCCeEEEeCCcccccccchhhcccCCcHHH-HHHhhCCee
Confidence 67889999854221111 001112345566666666542 233599999999854332111110001112 2222332 5
Q ss_pred EccCCCCCCC
Q 006938 291 VCIGNHEYDW 300 (625)
Q Consensus 291 ~v~GNHD~~~ 300 (625)
.++||||++.
T Consensus 80 ~t~GNHefd~ 89 (288)
T cd07412 80 SAVGNHEFDE 89 (288)
T ss_pred eeeccccccc
Confidence 6789999974
No 61
>KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair]
Probab=97.99 E-value=5.1e-05 Score=81.46 Aligned_cols=128 Identities=14% Similarity=0.136 Sum_probs=76.6
Q ss_pred CCcceEEEEEecCCCCCCC-c-ccc-c-chhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCC--chhhHHHHHHhHHH
Q 006938 209 SNETIAFLFGDMGAATPYT-T-FER-T-QDESISTMKWILRDIEALGDKPAFVSHIGDISYARG--YSWLWDEFFALIEP 282 (625)
Q Consensus 209 ~~~~~f~v~GD~g~~~~~~-~-~~~-~-q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g--~~~~wd~f~~~l~~ 282 (625)
++.+++++++|+|.-+.+. . +.. . .-.+.-.+....+... .--+||.++++||+.+.+. ..++|.+..+.++.
T Consensus 46 ~n~~ki~~vaDPQilg~~~~~~~~~~Ldk~~~D~~lrr~f~~~~-~~lkPdvvffLGDLfDeG~~~~~eEf~~~~~Rfkk 124 (410)
T KOG3662|consen 46 ENSTKILLVADPQILGNWPKKFLVSWLDKYGNDWYLRRSFDMSQ-WRLKPDVVFFLGDLFDEGQWAGDEEFKKRYERFKK 124 (410)
T ss_pred CCceEEEEecCchhcCCCCCccccchHHhhhhHHHHHHHHHHHH-hccCCCEEEEeccccccCccCChHHHHHHHHHHHH
Confidence 5678999999999876321 0 000 0 0001111222222222 2369999999999998553 35677776666665
Q ss_pred hh---cCCceEEccCCCCCCCCCCCCCCCCCCCccCCCCCCccccccccccccCCCCCCCCCCCCCCCCCceEEEEeCcE
Q 006938 283 VA---SRVAYHVCIGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKFHMPGNSLEPTGTRAPATRNLYYSFDMGVV 359 (625)
Q Consensus 283 ~~---~~iP~~~v~GNHD~~~~~~~~~~~~~~~~Y~~d~gge~~~~y~~~f~~P~~~~~~~G~~~~~~~~~yYsfd~G~v 359 (625)
+. ..+|.+.++||||+......+ .....||.-- .++...+|+.|+.
T Consensus 125 If~~k~~~~~~~i~GNhDIGf~~~~~------------------~~~i~Rfe~~-------------fg~~~r~f~v~~~ 173 (410)
T KOG3662|consen 125 IFGRKGNIKVIYIAGNHDIGFGNELI------------------PEWIDRFESV-------------FGPTERRFDVGNL 173 (410)
T ss_pred hhCCCCCCeeEEeCCccccccccccc------------------hhHHHHHHHh-------------hcchhhhhccCCc
Confidence 53 479999999999997432110 0122333210 1224567999999
Q ss_pred EEEEEeCCc
Q 006938 360 HFVYISTET 368 (625)
Q Consensus 360 ~fI~LDT~~ 368 (625)
.|+++|++.
T Consensus 174 tf~~~d~~~ 182 (410)
T KOG3662|consen 174 TFVMFDSNA 182 (410)
T ss_pred eeEEeeehh
Confidence 999999864
No 62
>COG2908 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.89 E-value=2.5e-05 Score=77.82 Aligned_cols=74 Identities=12% Similarity=0.045 Sum_probs=45.3
Q ss_pred EEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHh----HHHhh-cCCceE
Q 006938 216 LFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFAL----IEPVA-SRVAYH 290 (625)
Q Consensus 216 v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~----l~~~~-~~iP~~ 290 (625)
.++|.+.+... +.-. +.+++=++..+.+.|-++++||++..---...|.+..++ +..+. ...|++
T Consensus 2 FISDlHL~~~~-------p~~t---~~fl~Fl~~~a~~ad~lyilGDifd~w~g~~~~~~~~~~V~~~l~~~a~~G~~v~ 71 (237)
T COG2908 2 FISDLHLGPKR-------PALT---AFFLDFLREEAAQADALYILGDIFDGWIGDDEPPQLHRQVAQKLLRLARKGTRVY 71 (237)
T ss_pred eeeccccCCCC-------cHHH---HHHHHHHHhccccCcEEEEechhhhhhhcCCcccHHHHHHHHHHHHHHhcCCeEE
Confidence 57888887421 1212 223333444455779999999998743222245554433 33333 569999
Q ss_pred EccCCCCCC
Q 006938 291 VCIGNHEYD 299 (625)
Q Consensus 291 ~v~GNHD~~ 299 (625)
.+.||||+.
T Consensus 72 ~i~GN~Dfl 80 (237)
T COG2908 72 YIHGNHDFL 80 (237)
T ss_pred EecCchHHH
Confidence 999999974
No 63
>cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain. SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy
Probab=97.89 E-value=0.00047 Score=71.14 Aligned_cols=61 Identities=15% Similarity=0.245 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHHhCCCCcEE-EEcCccccCCCchhhHHHHHHhHHHhhcCCceEEccCCCCCCC
Q 006938 237 ISTMKWILRDIEALGDKPAFV-SHIGDISYARGYSWLWDEFFALIEPVASRVAYHVCIGNHEYDW 300 (625)
Q Consensus 237 ~~tl~~i~~~i~~~~~~pdfv-l~~GDivy~~g~~~~wd~f~~~l~~~~~~iP~~~v~GNHD~~~ 300 (625)
...++.+++++++. ..++.+ +.+||+...... ..+... +.+-..+..+++.++.||||++.
T Consensus 35 ~~r~~~~v~~~~~~-~~~~~l~l~~GD~~~gs~~-~~~~~g-~~~~~~l~~~g~da~~GNHefd~ 96 (264)
T cd07411 35 FAHIATLIKRIRAE-RNPNTLLLDGGDTWQGSGE-ALYTRG-QAMVDALNALGVDAMVGHWEFTY 96 (264)
T ss_pred HHHHHHHHHHHHHh-cCCCeEEEeCCCccCCChH-HhhcCC-hhHHHHHHhhCCeEEeccccccc
Confidence 34455666665542 167866 679999865432 111111 12222334477766669999873
No 64
>cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain. SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet
Probab=97.87 E-value=0.00052 Score=70.52 Aligned_cols=81 Identities=15% Similarity=0.161 Sum_probs=42.7
Q ss_pred eEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhh-cCCceEE
Q 006938 213 IAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVA-SRVAYHV 291 (625)
Q Consensus 213 ~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~-~~iP~~~ 291 (625)
+++.+.|+|..-... . .+......++.+++.+++. .+++++.+||++..... ..+..-...++.+. ..+-+ .
T Consensus 2 ~il~~~D~H~~~~~~--~-~~~~g~~~l~~~i~~~~~~--~~~l~l~~GD~~~gs~~-~~~~~g~~~~~~ln~~g~d~-~ 74 (257)
T cd07408 2 TILHTNDIHGRIDED--D-NNGIGYAKLATYKKEMNKL--DNDLLVDAGDAIQGLPI-SDLDKGETIIKIMNAVGYDA-V 74 (257)
T ss_pred EEEEeccCcccccCC--C-CccccHHHHHHHHHHHHhc--CCEEEEeCCCcCCCchh-hhhcCCcHHHHHHHhcCCcE-E
Confidence 678889998642110 0 0112234456666665542 57899999999754321 11111011122222 23444 4
Q ss_pred ccCCCCCCC
Q 006938 292 CIGNHEYDW 300 (625)
Q Consensus 292 v~GNHD~~~ 300 (625)
++||||++.
T Consensus 75 ~~GNHefd~ 83 (257)
T cd07408 75 TPGNHEFDY 83 (257)
T ss_pred ccccccccC
Confidence 689999973
No 65
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=97.84 E-value=0.0013 Score=67.71 Aligned_cols=197 Identities=14% Similarity=0.116 Sum_probs=104.7
Q ss_pred eEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCC-CchhhHHHHHHhHHHhhcCCceEE
Q 006938 213 IAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYAR-GYSWLWDEFFALIEPVASRVAYHV 291 (625)
Q Consensus 213 ~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~-g~~~~wd~f~~~l~~~~~~iP~~~ 291 (625)
+++++||.=.. .....++..+..+++ ..++||++..||++-.+ +... ...+.+. ...+-++.
T Consensus 2 ~ilfiGDi~G~-----------~Gr~~l~~~L~~lk~-~~~~D~vIaNgEn~~gG~Gi~~---~~~~~L~--~~GvDviT 64 (266)
T TIGR00282 2 KFLFIGDVYGK-----------AGRKIVKNNLPQLKS-KYQADLVIANGENTTHGKGLTL---KIYEFLK--QSGVNYIT 64 (266)
T ss_pred eEEEEEecCCH-----------HHHHHHHHHHHHHHH-hCCCCEEEEcCcccCCCCCCCH---HHHHHHH--hcCCCEEE
Confidence 68899997422 123456666666654 35789999999998543 2221 1122221 24666666
Q ss_pred ccCCCCCCCCCCCCCCCCCCCccCCCCCCccccccccccccCCCCCCCCCCCCCCCCCceEEEEeCcEEEEEEeCCc-cc
Q 006938 292 CIGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKFHMPGNSLEPTGTRAPATRNLYYSFDMGVVHFVYISTET-NF 370 (625)
Q Consensus 292 v~GNHD~~~~~~~~~~~~~~~~Y~~d~gge~~~~y~~~f~~P~~~~~~~G~~~~~~~~~yYsfd~G~v~fI~LDT~~-~~ 370 (625)
+ |||+++.... .. +- +. .+ ...+..++|...+ +..|+-++.++..+-+++-.. .+
T Consensus 65 ~-GNH~~Dkge~------~~--~i-~~--~~--~~lrpanyp~~~p----------G~g~~i~~~nG~kiaVinl~G~~f 120 (266)
T TIGR00282 65 M-GNHTWFQKLI------LD--VV-IN--QK--DLVRPLNFDTSFA----------GKGSLVFEFNGAKIAVTNLQGTSV 120 (266)
T ss_pred c-cchhccCcHH------HH--HH-hc--cc--cccccCCCCCCCC----------CCCcEEEEECCEEEEEEECCCccc
Confidence 5 9999974210 00 00 00 00 0111112232111 223556777877766665321 11
Q ss_pred C-C--ChHHHHHHHHHhhccccCCCCeEEEEcccCCccCCCCCCChhhhHHHHHHHHHHHHHcCceEEEEcCccCceeee
Q 006938 371 L-Q--GSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVENNVTLALWGHVHRYERFC 447 (625)
Q Consensus 371 ~-~--~~~Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~~~d~~~~~~~~~~l~~l~~ky~VdlvlsGH~H~yeR~~ 447 (625)
. + ...-++-+++.+++.+ .+++.+||.+|.-.- . .+.....+.+.+|++|+.-|.|...--
T Consensus 121 m~~~~~~~Pf~~~d~~i~~lk-~~~d~IIVd~Haeat-----------s---EK~a~~~~ldg~vsaVvGtHtHV~TaD- 184 (266)
T TIGR00282 121 NLPFKTTNPFKVLKELINMLK-KDCDLIFVDFHAETT-----------S---EKNAFGMAFDGYVTAVVGTHTHVPTAD- 184 (266)
T ss_pred CCccccCCHHHHHHHHHHhhh-cCCCEEEEEeCCCCH-----------H---HHHHHHHHhCCCccEEEeCCCCCCCCc-
Confidence 1 1 1212233444444433 246789999997321 1 133345666789999999999984211
Q ss_pred ccCCccccCCCCCCCCCCCCcEEEEE-CCCCCC
Q 006938 448 PLNNFTCGSMGMDGEPSEAFPVHIVI-GMAGQD 479 (625)
Q Consensus 448 p~~~~~~~~~~~~~~~~~~g~vyIv~-G~gG~~ 479 (625)
.++. ++|+-||.- |+.|..
T Consensus 185 ----~~il---------~~gtayitD~Gm~G~~ 204 (266)
T TIGR00282 185 ----LRIL---------PKGTAYITDVGMTGPF 204 (266)
T ss_pred ----ceeC---------CCCCEEEecCCcccCc
Confidence 1111 578888864 777764
No 66
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=97.83 E-value=0.0013 Score=67.46 Aligned_cols=172 Identities=18% Similarity=0.184 Sum_probs=87.6
Q ss_pred eEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCC-CchhhHHHHHHhHHHhhcCCceEE
Q 006938 213 IAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYAR-GYSWLWDEFFALIEPVASRVAYHV 291 (625)
Q Consensus 213 ~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~-g~~~~wd~f~~~l~~~~~~iP~~~ 291 (625)
+++++||.=.. .....++..++.+++ ..++||++..||++-.+ +... ...+.+. ...+-++
T Consensus 1 ~ilfigdi~g~-----------~G~~~~~~~l~~lk~-~~~~D~vi~NgEn~~gg~gl~~---~~~~~L~--~~G~D~i- 62 (255)
T cd07382 1 KILFIGDIVGK-----------PGRKAVKEHLPKLKK-EYKIDFVIANGENAAGGKGITP---KIAKELL--SAGVDVI- 62 (255)
T ss_pred CEEEEEeCCCH-----------HHHHHHHHHHHHHHH-HCCCCEEEECCccccCCCCCCH---HHHHHHH--hcCCCEE-
Confidence 47889997332 123455555666554 35789999999997654 2221 1122221 1344444
Q ss_pred ccCCCCCCCCCCCCCCCCCCCccCCCCCCcccccccccc---ccCCCCCCCCCCCCCCCCCceEEEEeCcEEEEEEeCC-
Q 006938 292 CIGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKF---HMPGNSLEPTGTRAPATRNLYYSFDMGVVHFVYISTE- 367 (625)
Q Consensus 292 v~GNHD~~~~~~~~~~~~~~~~Y~~d~gge~~~~y~~~f---~~P~~~~~~~G~~~~~~~~~yYsfd~G~v~fI~LDT~- 367 (625)
+.|||+++... + + .+.... -.|.|-+ .+. | ...|+-++.+++++-+++-.
T Consensus 63 TlGNH~fD~ge--l--------~----------~~l~~~~~~l~~aN~~--~~~--p--g~~~~i~~~~G~kIaVigl~g 116 (255)
T cd07382 63 TMGNHTWDKKE--I--------L----------DFIDEEPRLLRPANYP--PGT--P--GRGYGVVEVNGKKIAVINLMG 116 (255)
T ss_pred EecccccCcch--H--------H----------HHHhcCcCceEeeecC--CCC--C--CCCeEEEEECCEEEEEEEEec
Confidence 56999997421 0 0 011111 1111111 000 1 23467778888666555422
Q ss_pred cccC-CChHHHHHHHHHhhccccCCCCeEEEEcccCCccCCCCCCChhhhHHHHHHHHHHHHHcCceEEEEcCccCc
Q 006938 368 TNFL-QGSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVENNVTLALWGHVHRY 443 (625)
Q Consensus 368 ~~~~-~~~~Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~~~d~~~~~~~~~~l~~l~~ky~VdlvlsGH~H~y 443 (625)
..+. .-..-++-+++.+++.+. +.+.+||.+|.-.. .+ ..++.. ...-+||+++.||+|..
T Consensus 117 ~~~~~~~~~P~~~~~~~v~~lk~-~~D~IIV~~H~g~t-----------sE--k~ala~-~ldg~VdvIvGtHTHv~ 178 (255)
T cd07382 117 RVFMPPLDNPFRAADELLEELKE-EADIIFVDFHAEAT-----------SE--KIALGW-YLDGRVSAVVGTHTHVQ 178 (255)
T ss_pred ccCCCcCCCHHHHHHHHHHHHhc-CCCEEEEEECCCCC-----------HH--HHHHHH-hCCCCceEEEeCCCCcc
Confidence 1111 112223345555555442 57789999998321 01 112221 11236999999999985
No 67
>cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain. UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs
Probab=97.79 E-value=0.00045 Score=72.16 Aligned_cols=51 Identities=18% Similarity=0.261 Sum_probs=29.9
Q ss_pred CCCCeEEEEcccCCccCCCCCCChhhhHHHHHHHHHHHHHcCceEEEEcCccCce
Q 006938 390 KKTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVENNVTLALWGHVHRYE 444 (625)
Q Consensus 390 ~~~~wiIV~~H~P~y~~~~~~~d~~~~~~~~~~l~~l~~ky~VdlvlsGH~H~ye 444 (625)
.++.-+|++.|................ ..+...+...+||++|.||.|...
T Consensus 172 ~~~D~VI~lsH~G~~~~~~~~~~~~~~----~~lA~~~~~~giD~IigGHsH~~~ 222 (285)
T cd07405 172 EKPDIVIAATHMGHYDNGEHGSNAPGD----VEMARALPAGGLDLIVGGHSQDPV 222 (285)
T ss_pred cCCCEEEEEecccccCCccccccCchH----HHHHHhcCCCCCCEEEeCCCCccc
Confidence 357779999999875432211111101 122222223589999999999854
No 68
>TIGR00619 sbcd exonuclease SbcD. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=97.73 E-value=0.00013 Score=74.84 Aligned_cols=85 Identities=15% Similarity=0.111 Sum_probs=53.8
Q ss_pred ceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCch-hhHHHHHHhHHHhh-cC-Cc
Q 006938 212 TIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYS-WLWDEFFALIEPVA-SR-VA 288 (625)
Q Consensus 212 ~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~-~~wd~f~~~l~~~~-~~-iP 288 (625)
.+|+.++|+|.+.......+ ..+....++++++.+.+ .+||+|+++||++...... .....+.+.++.+. .. +|
T Consensus 1 mkilh~SD~Hlg~~~~~~~~-~~~~~~~l~~l~~~~~~--~~~D~lli~GDi~d~~~p~~~~~~~~~~~l~~l~~~~~i~ 77 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGVSR-LAEQKAFLDDLLEFAKA--EQIDALLVAGDVFDTANPPAEAQELFNAFFRNLSDANPIP 77 (253)
T ss_pred CEEEEEhhhcCCCccCCCCh-HHHHHHHHHHHHHHHHH--cCCCEEEECCccCCCCCCCHHHHHHHHHHHHHHHhcCCce
Confidence 37899999998754222111 11223456666665543 5899999999998765432 22233444444443 23 89
Q ss_pred eEEccCCCCCC
Q 006938 289 YHVCIGNHEYD 299 (625)
Q Consensus 289 ~~~v~GNHD~~ 299 (625)
+++++||||..
T Consensus 78 v~~i~GNHD~~ 88 (253)
T TIGR00619 78 IVVISGNHDSA 88 (253)
T ss_pred EEEEccCCCCh
Confidence 99999999985
No 69
>COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair]
Probab=97.66 E-value=0.00013 Score=79.50 Aligned_cols=86 Identities=16% Similarity=0.157 Sum_probs=57.5
Q ss_pred ceEEEEEecCCC-CCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCch-hhHHHHHHhHHHhh-cCCc
Q 006938 212 TIAFLFGDMGAA-TPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYS-WLWDEFFALIEPVA-SRVA 288 (625)
Q Consensus 212 ~~f~v~GD~g~~-~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~-~~wd~f~~~l~~~~-~~iP 288 (625)
.+|+.++|+|.+ ..++...+. ......+.++++.+.+ .++||||++||++...... ..-..+.+.++.+. .++|
T Consensus 1 mkilHtSD~HLG~~~~~~~~r~-~d~~~~f~~~l~~a~~--~~vD~vliAGDlFd~~~Ps~~a~~~~~~~l~~l~~~~Ip 77 (390)
T COG0420 1 MKILHTSDWHLGSKQLNLPSRL-EDQKKAFDELLEIAKE--EKVDFVLIAGDLFDTNNPSPRALKLFLEALRRLKDAGIP 77 (390)
T ss_pred CeeEEecccccchhhccCccch-HHHHHHHHHHHHHHHH--ccCCEEEEccccccCCCCCHHHHHHHHHHHHHhccCCCc
Confidence 379999999998 433322221 2334566667766554 6889999999998765432 22234455555543 5899
Q ss_pred eEEccCCCCCCC
Q 006938 289 YHVCIGNHEYDW 300 (625)
Q Consensus 289 ~~~v~GNHD~~~ 300 (625)
++++.||||...
T Consensus 78 v~~I~GNHD~~~ 89 (390)
T COG0420 78 VVVIAGNHDSPS 89 (390)
T ss_pred EEEecCCCCchh
Confidence 999999999853
No 70
>cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain. This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal
Probab=97.64 E-value=9.6e-05 Score=73.62 Aligned_cols=72 Identities=18% Similarity=0.198 Sum_probs=44.6
Q ss_pred EEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHh------CCCCcEEEEcCccccCCCchhhHHHHHHhHHH--hhcC
Q 006938 215 FLFGDMGAATPYTTFERTQDESISTMKWILRDIEAL------GDKPAFVSHIGDISYARGYSWLWDEFFALIEP--VASR 286 (625)
Q Consensus 215 ~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~------~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~--~~~~ 286 (625)
+++||.|.. ...++.+++.++-. ..+.|.++++||++..+....+-=.++..+.. ....
T Consensus 1 ~vi~DIHG~-------------~~~l~~ll~~~~~~~~~~~~~~~~d~lv~lGD~vdrG~~~~~vl~~l~~l~~~~~~~~ 67 (208)
T cd07425 1 VAIGDLHGD-------------LDAFREILKGAGVIDSNDHWIGGSTHLVQLGDIFDRGPDVIEILWLLYKLEQEAAKAG 67 (208)
T ss_pred CEEeCccCC-------------HHHHHHHHHHCCCCCccccccCCCcEEEEECCCcCCCcCHHHHHHHHHHHHHHHHhcC
Confidence 478999876 34566666544211 23689999999999865433221122222211 2245
Q ss_pred CceEEccCCCCCC
Q 006938 287 VAYHVCIGNHEYD 299 (625)
Q Consensus 287 iP~~~v~GNHD~~ 299 (625)
.+++++.||||..
T Consensus 68 ~~v~~l~GNHE~~ 80 (208)
T cd07425 68 GKVHFLLGNHELM 80 (208)
T ss_pred CeEEEeeCCCcHH
Confidence 7899999999975
No 71
>cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain. CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si
Probab=97.57 E-value=0.0014 Score=68.30 Aligned_cols=78 Identities=10% Similarity=0.125 Sum_probs=45.6
Q ss_pred ceEEEEeCcEE--EEEEeCCcc-c--C--CC---hHHHHHHHHHhhccccCCCCeEEEEcccCCccCCCCCCChhhhHHH
Q 006938 350 LYYSFDMGVVH--FVYISTETN-F--L--QG---SNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAPLRNRM 419 (625)
Q Consensus 350 ~yYsfd~G~v~--fI~LDT~~~-~--~--~~---~~Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~~~d~~~~~~~ 419 (625)
.|.-++.++++ ||.+-+... . . .+ .+..+.+++.+++.+..++..+|++.|...-. + .
T Consensus 131 p~~i~~~~G~kIgviG~~~~~~~~~~~~~~~~~~~d~~~~~~~~v~~lr~~~~D~II~l~H~G~~~------d----~-- 198 (281)
T cd07409 131 PSTILTVGGEKIGIIGYTTPDTTELSSPGGKVKFLDEIEAAQKEADKLKAQGVNKIIALSHSGYEV------D----K-- 198 (281)
T ss_pred CeEEEEECCEEEEEEEEecCcccccccCCCceEECCHHHHHHHHHHHHHhcCCCEEEEEeccCchh------H----H--
Confidence 35667788855 455543211 0 0 11 23345566666655445678899999986421 0 1
Q ss_pred HHHHHHHHHH-cCceEEEEcCccCce
Q 006938 420 LEHLEPLFVE-NNVTLALWGHVHRYE 444 (625)
Q Consensus 420 ~~~l~~l~~k-y~VdlvlsGH~H~ye 444 (625)
.+.++ .+||++|+||.|...
T Consensus 199 -----~la~~~~giD~IiggH~H~~~ 219 (281)
T cd07409 199 -----EIARKVPGVDVIVGGHSHTFL 219 (281)
T ss_pred -----HHHHcCCCCcEEEeCCcCccc
Confidence 22222 489999999999964
No 72
>cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain. YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at
Probab=97.57 E-value=0.0016 Score=67.98 Aligned_cols=81 Identities=14% Similarity=0.177 Sum_probs=44.9
Q ss_pred ceEEEEeC-cEE--EEEEeCCcc-------cCCC--hHHHHHHHHHhhccccCCCCeEEEEcccCCccCCCCCCChhhhH
Q 006938 350 LYYSFDMG-VVH--FVYISTETN-------FLQG--SNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAPLRN 417 (625)
Q Consensus 350 ~yYsfd~G-~v~--fI~LDT~~~-------~~~~--~~Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~~~d~~~~~ 417 (625)
.|.-++.+ +++ ||.+-+... +.+. ..+.+|+.+.|++ .+...+|+++|....... . . .
T Consensus 137 ~y~i~~~~~G~kIgiiGltt~~~~~~~~~~f~d~~~~~~~~~v~~~l~~---~~~DvIIvlsH~G~~~d~----~--~-~ 206 (282)
T cd07407 137 RYRKFTTKHGLRVLAFGFLFDFKGAANGVTVQPVADVVQEPWFQDAINN---EDVDLILVLGHMPVRDDA----E--F-K 206 (282)
T ss_pred ceEEEEcCCCcEEEEEEEecccccCCCCcEEcCHHHHHHHHHHHHHHHh---cCCCEEEEEeCCCCCCCc----c--H-H
Confidence 35666765 655 565543211 1111 2233488877874 357779999998764331 0 0 1
Q ss_pred HHHHHHHHHHHHc-Cce-EEEEcCccCc
Q 006938 418 RMLEHLEPLFVEN-NVT-LALWGHVHRY 443 (625)
Q Consensus 418 ~~~~~l~~l~~ky-~Vd-lvlsGH~H~y 443 (625)
.. ...+.++. ++| ++|.||+|..
T Consensus 207 ~~---~~~la~~~~~id~~Ii~GHsH~~ 231 (282)
T cd07407 207 VL---HDAIRKIFPDTPIQFLGGHSHVR 231 (282)
T ss_pred HH---HHHHHHhCCCCCEEEEeCCcccc
Confidence 11 11233333 567 7999999975
No 73
>PHA02546 47 endonuclease subunit; Provisional
Probab=97.52 E-value=0.00037 Score=74.64 Aligned_cols=84 Identities=17% Similarity=0.165 Sum_probs=51.8
Q ss_pred eEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCC-chhhHHHHHHh--HHHhh-cCCc
Q 006938 213 IAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARG-YSWLWDEFFAL--IEPVA-SRVA 288 (625)
Q Consensus 213 ~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g-~~~~wd~f~~~--l~~~~-~~iP 288 (625)
+|+.++|+|.+..... .+........++++++.+. +.+||+||++||++.... ....-..+... ++.+. ..+|
T Consensus 2 KilhiSD~HLG~~~~~-~~~~~~~~~~l~~ii~~a~--~~~vD~VliaGDlfD~~~~~~~~~~~~~~~~l~~~L~~~gi~ 78 (340)
T PHA02546 2 KILLIGDQHLGVRKDD-PWFQNYQLKFIKQAIEYSK--AHGITTWIQLGDTFDVRKAITQNTMNFVREKIFDLLKEAGIT 78 (340)
T ss_pred eEEEEeeecCCCcCCC-hhhHHHHHHHHHHHHHHHH--HcCCCEEEECCcccCCCCCCCHHHHHHHHHHHHHHHHHCCCe
Confidence 7899999998743211 1112223345666666554 468999999999986542 22111123322 33332 4799
Q ss_pred eEEccCCCCCC
Q 006938 289 YHVCIGNHEYD 299 (625)
Q Consensus 289 ~~~v~GNHD~~ 299 (625)
+++++||||..
T Consensus 79 v~~I~GNHD~~ 89 (340)
T PHA02546 79 LHVLVGNHDMY 89 (340)
T ss_pred EEEEccCCCcc
Confidence 99999999974
No 74
>PRK10966 exonuclease subunit SbcD; Provisional
Probab=97.51 E-value=0.00037 Score=76.41 Aligned_cols=85 Identities=14% Similarity=0.189 Sum_probs=51.1
Q ss_pred ceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhH-HHHHHhHHHhh-cCCce
Q 006938 212 TIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLW-DEFFALIEPVA-SRVAY 289 (625)
Q Consensus 212 ~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~w-d~f~~~l~~~~-~~iP~ 289 (625)
.+|+.++|+|.+.......+. ......++++++.+.+ .+||+||++||++......... ..+.+.+..+. ..+|+
T Consensus 1 mkilh~SDlHlG~~~~~~~~~-~~~~~~l~~l~~~i~~--~~~D~viIaGDifD~~~p~~~a~~~~~~~l~~L~~~~~~v 77 (407)
T PRK10966 1 MRILHTSDWHLGQNFYSKSRA-AEHQAFLDWLLEQVQE--HQVDAIIVAGDIFDTGSPPSYARELYNRFVVNLQQTGCQL 77 (407)
T ss_pred CEEEEEcccCCCCcccCcccH-HHHHHHHHHHHHHHHh--cCCCEEEECCccccCCCCcHHHHHHHHHHHHHHHhcCCcE
Confidence 378999999987432111111 1112334556655543 6899999999998654322211 22223333332 36899
Q ss_pred EEccCCCCCC
Q 006938 290 HVCIGNHEYD 299 (625)
Q Consensus 290 ~~v~GNHD~~ 299 (625)
++++||||..
T Consensus 78 ~~I~GNHD~~ 87 (407)
T PRK10966 78 VVLAGNHDSV 87 (407)
T ss_pred EEEcCCCCCh
Confidence 9999999975
No 75
>PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed
Probab=97.51 E-value=0.0024 Score=72.98 Aligned_cols=84 Identities=13% Similarity=0.096 Sum_probs=43.4
Q ss_pred CcceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHh---CCCCcEEEEcCccccCCCchhhHHHHHH--hHHHhh
Q 006938 210 NETIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEAL---GDKPAFVSHIGDISYARGYSWLWDEFFA--LIEPVA 284 (625)
Q Consensus 210 ~~~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~---~~~pdfvl~~GDivy~~g~~~~wd~f~~--~l~~~~ 284 (625)
..++++.+.|+|..-....+. ......+..+++.+++. ....-++|.+||+..... +..+.+ .+-.++
T Consensus 33 ~~ltil~tnD~Hg~~~~~~~~---~~G~a~~a~~i~~~r~~~~~~~~~~l~ldaGD~~~Gs~----~s~~~~g~~~i~~m 105 (551)
T PRK09558 33 YKITILHTNDHHGHFWRNEYG---EYGLAAQKTLVDQIRKEVAAEGGSVLLLSGGDINTGVP----ESDLQDAEPDFRGM 105 (551)
T ss_pred eEEEEEEecccCCCccccccC---CccHHHHHHHHHHHHHHhhccCCCEEEEcCCccccceE----hhhhcCCchhHHHH
Confidence 357899999999863211111 11234445556555432 123468999999865321 111111 111122
Q ss_pred cCCc-eEEccCCCCCCC
Q 006938 285 SRVA-YHVCIGNHEYDW 300 (625)
Q Consensus 285 ~~iP-~~~v~GNHD~~~ 300 (625)
..+. =..++||||++.
T Consensus 106 N~~g~Da~tlGNHEFD~ 122 (551)
T PRK09558 106 NLIGYDAMAVGNHEFDN 122 (551)
T ss_pred hcCCCCEEcccccccCc
Confidence 2222 244679999974
No 76
>COG0622 Predicted phosphoesterase [General function prediction only]
Probab=97.48 E-value=0.0072 Score=58.28 Aligned_cols=64 Identities=19% Similarity=0.129 Sum_probs=40.3
Q ss_pred ceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhcCCceEE
Q 006938 212 TIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASRVAYHV 291 (625)
Q Consensus 212 ~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~~iP~~~ 291 (625)
.++++++|+|.... ...+ ..+ +. ...++|+|||+||.+...... .++. .-..++++
T Consensus 2 m~ilviSDtH~~~~------------~~~~-~~~-~~-~~~~~d~vih~GD~~~~~~~~--------~l~~-~~~~~i~~ 57 (172)
T COG0622 2 MKILVISDTHGPLR------------AIEK-ALK-IF-NLEKVDAVIHAGDSTSPFTLD--------ALEG-GLAAKLIA 57 (172)
T ss_pred cEEEEEeccCCChh------------hhhH-HHH-Hh-hhcCCCEEEECCCcCCccchH--------Hhhc-ccccceEE
Confidence 36899999998631 0111 111 11 136999999999998754311 1110 02678999
Q ss_pred ccCCCCCC
Q 006938 292 CIGNHEYD 299 (625)
Q Consensus 292 v~GNHD~~ 299 (625)
|.||.|..
T Consensus 58 V~GN~D~~ 65 (172)
T COG0622 58 VRGNCDGE 65 (172)
T ss_pred EEccCCCc
Confidence 99999984
No 77
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=97.40 E-value=0.0051 Score=76.29 Aligned_cols=77 Identities=17% Similarity=0.251 Sum_probs=42.3
Q ss_pred cceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEE-cCccccCCCchhhHHHHHHhHHHhhcCCce
Q 006938 211 ETIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSH-IGDISYARGYSWLWDEFFALIEPVASRVAY 289 (625)
Q Consensus 211 ~~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~-~GDivy~~g~~~~wd~f~~~l~~~~~~iP~ 289 (625)
.++++.++|+|..-. ....+..+++++++ .+|+.+++ +||++...... .+......++.+..--.-
T Consensus 660 ~l~Il~~nD~Hg~l~----------g~~r~~~~i~~~r~--~~~~~l~ld~GD~~~gs~~~-~~~~g~~~~~~ln~lg~d 726 (1163)
T PRK09419 660 ELTILHTNDFHGHLD----------GAAKRVTKIKEVKE--ENPNTILVDAGDVYQGSLYS-NLLKGLPVLKMMKEMGYD 726 (1163)
T ss_pred EEEEEEEeecccCCC----------CHHHHHHHHHHHHh--hCCCeEEEecCCCCCCcchh-hhcCChHHHHHHhCcCCC
Confidence 478999999995421 12335556666554 36776655 99997543211 111111122222222233
Q ss_pred EEccCCCCCCC
Q 006938 290 HVCIGNHEYDW 300 (625)
Q Consensus 290 ~~v~GNHD~~~ 300 (625)
+.++||||++.
T Consensus 727 ~~~~GNHEfd~ 737 (1163)
T PRK09419 727 ASTFGNHEFDW 737 (1163)
T ss_pred EEEeccccccc
Confidence 56999999974
No 78
>COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism]
Probab=97.34 E-value=0.0022 Score=72.65 Aligned_cols=204 Identities=15% Similarity=0.221 Sum_probs=99.7
Q ss_pred cceEEEEEecCCCCCCCccc-ccc-hhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhcCCc
Q 006938 211 ETIAFLFGDMGAATPYTTFE-RTQ-DESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASRVA 288 (625)
Q Consensus 211 ~~~f~v~GD~g~~~~~~~~~-~~q-~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~~iP 288 (625)
.++++...|+|..-....+. ... .........+++.+++ ..+..++|.+||++........ ..--+..-.++..++
T Consensus 26 ~l~ilhtnD~H~~l~~~~~~~~~~~~~g~~~~~~~v~~~ra-~~~~~llld~GD~~~G~~l~~~-~~~g~~~~~~mN~m~ 103 (517)
T COG0737 26 KLTILHTNDLHGHLEPYDYDDDGDTDGGLARIATLVKQLRA-ENKNVLLLDAGDLIQGSPLSDY-LTKGEPTVDLLNALG 103 (517)
T ss_pred eEEEEEeccccccceeccccccCcccccHHHHHHHHHHHHh-hcCCeEEEeCCcccCCcccccc-ccCCChHHHHHhhcC
Confidence 57899999998865411111 101 1122334445555544 2346799999999875432111 000111112233333
Q ss_pred e-EEccCCCCCCCCCCCCCCCCCCCccCCCCCCccccccccccccC---CCCCCCCCCCCCCCCCceEEEEeCcEE--EE
Q 006938 289 Y-HVCIGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKFHMP---GNSLEPTGTRAPATRNLYYSFDMGVVH--FV 362 (625)
Q Consensus 289 ~-~~v~GNHD~~~~~~~~~~~~~~~~Y~~d~gge~~~~y~~~f~~P---~~~~~~~G~~~~~~~~~yYsfd~G~v~--fI 362 (625)
+ ..++||||++.....+. .+......| .|--...+. .+...+.|.-++.++++ +|
T Consensus 104 yDa~tiGNHEFd~g~~~l~------------------~~~~~~~fp~l~aNv~~~~~~-~~~~~~Py~I~~~~g~KIgiI 164 (517)
T COG0737 104 YDAMTLGNHEFDYGLEALA------------------RLLDEAKFPVLSANVYDKNST-GPPFFKPYAIKEVGGVKIGII 164 (517)
T ss_pred CcEEeecccccccCHHHHH------------------HHHhccCCceEEeeeEecCCC-CccCcCCeEEEecCCeEEEEE
Confidence 3 56899999974311000 000001111 000000000 01123457778888755 56
Q ss_pred EEeCCc--ccC--------CChHHHHHHHHHhhccccCCCCeEEEEcccCCccCCCCCCChhhhHHHHHHHHHHHHHcCc
Q 006938 363 YISTET--NFL--------QGSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVENNV 432 (625)
Q Consensus 363 ~LDT~~--~~~--------~~~~Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~~~d~~~~~~~~~~l~~l~~ky~V 432 (625)
.+.+.. .+. .-.+..+++++.+.+.+.....-+|++.|.+............. ... +.. .++
T Consensus 165 G~~~~~~~~~~~~~~~~~~~f~d~~e~~~~~i~elk~~~vD~iI~LsH~G~~~d~~~~~~~~~---~~~----~~~-~~i 236 (517)
T COG0737 165 GLTTPTIPTWEKPNAIEGVTFRDPIEAAKKYIPELKGEGVDVIIALSHLGIEDDLELASEVPG---DVD----VAV-PGI 236 (517)
T ss_pred EecCCcccccccccccCCcEEcCHHHHHHHHHHHHHhcCCCEEEEEeccCcCccccccccccc---ccc----ccc-cCc
Confidence 665421 000 01345666777776655444777999999988765432211100 000 000 349
Q ss_pred eEEEEcCccCc
Q 006938 433 TLALWGHVHRY 443 (625)
Q Consensus 433 dlvlsGH~H~y 443 (625)
|+++.||.|.+
T Consensus 237 D~i~~GH~H~~ 247 (517)
T COG0737 237 DLIIGGHSHTV 247 (517)
T ss_pred ceEeccCCccc
Confidence 99999999964
No 79
>TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN. This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc.
Probab=97.24 E-value=0.0059 Score=69.72 Aligned_cols=62 Identities=23% Similarity=0.166 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhcCCceEEccCCCCCCC
Q 006938 237 ISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASRVAYHVCIGNHEYDW 300 (625)
Q Consensus 237 ~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~~iP~~~v~GNHD~~~ 300 (625)
...++.+++++++. ....+++.+||++...... .+..-...++-+..--.=..++||||++.
T Consensus 34 ~a~l~~~i~~~r~~-~~n~l~ldaGD~~~gs~~~-~~~~g~~~i~~~N~~g~Da~~lGNHEFd~ 95 (550)
T TIGR01530 34 FAALNAEINKLRAE-SKNALVLHAGDAIIGTLYF-TLFGGRADAALMNAAGFDFFTLGNHEFDA 95 (550)
T ss_pred HHHHHHHHHHHHhh-CCCeEEEECCCCCCCccch-hhcCCHHHHHHHhccCCCEEEeccccccC
Confidence 34455666665543 2336899999997543211 11100111222222223356799999974
No 80
>cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain. The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera
Probab=97.05 E-value=0.0016 Score=66.34 Aligned_cols=77 Identities=14% Similarity=0.185 Sum_probs=47.7
Q ss_pred EEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhC---CCCcEEEEcCccccCCCc-------------hhhHHHHHH
Q 006938 215 FLFGDMGAATPYTTFERTQDESISTMKWILRDIEALG---DKPAFVSHIGDISYARGY-------------SWLWDEFFA 278 (625)
Q Consensus 215 ~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~---~~pdfvl~~GDivy~~g~-------------~~~wd~f~~ 278 (625)
++++|.|.+.... ....++.+++.++... .++|.|+++||++..... ...+..+.+
T Consensus 2 ~~iSDlHl~~~~~--------~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (243)
T cd07386 2 VFISDVHVGSKTF--------LEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAAE 73 (243)
T ss_pred EEecccCCCchhh--------hHHHHHHHHHHHcCCcccccCccEEEEeCCcccccccCCcchhhhhhhhHHHHHHHHHH
Confidence 5689998764210 1122344455444332 367999999999875210 112334445
Q ss_pred hHHHhhcCCceEEccCCCCCC
Q 006938 279 LIEPVASRVAYHVCIGNHEYD 299 (625)
Q Consensus 279 ~l~~~~~~iP~~~v~GNHD~~ 299 (625)
.++.+...+|+++++||||..
T Consensus 74 ~l~~L~~~~~v~~ipGNHD~~ 94 (243)
T cd07386 74 YLSDVPSHIKIIIIPGNHDAV 94 (243)
T ss_pred HHHhcccCCeEEEeCCCCCcc
Confidence 556666679999999999985
No 81
>cd08162 MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat
Probab=97.03 E-value=0.0085 Score=63.50 Aligned_cols=47 Identities=6% Similarity=0.017 Sum_probs=27.7
Q ss_pred eEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhC---CCCcEEEEcCccccC
Q 006938 213 IAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALG---DKPAFVSHIGDISYA 266 (625)
Q Consensus 213 ~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~---~~pdfvl~~GDivy~ 266 (625)
+++.+.|+|..-.. ......++.+++.+++.+ ....+++.+||++..
T Consensus 2 ~IlhtnD~Hg~~~~-------~gg~ar~a~~i~~~r~~~~~~~~~~l~ldaGD~~qG 51 (313)
T cd08162 2 QLLHTSDGESGLLA-------EDDAPNFSALVNALKDEAAAEYDNTLTLSSGDNFIP 51 (313)
T ss_pred eEEEecccccCccc-------cCCHHHHHHHHHHHHHhhhccCCCeEEEecCccccC
Confidence 57788888765210 112334555566654421 334699999998753
No 82
>cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain. CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site
Probab=97.02 E-value=0.0026 Score=60.01 Aligned_cols=45 Identities=9% Similarity=-0.085 Sum_probs=28.8
Q ss_pred CCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhcCCceEEccCCCC
Q 006938 251 GDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASRVAYHVCIGNHE 297 (625)
Q Consensus 251 ~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~~iP~~~v~GNHD 297 (625)
+...|++|.+||+.-.......|..++.. .....+|.|.+-|||+
T Consensus 24 ~gpFd~~ic~Gdff~~~~~~~~~~~y~~g--~~~~pipTyf~ggn~~ 68 (150)
T cd07380 24 KGPFDALLCVGDFFGDDEDDEELEAYKDG--SKKVPIPTYFLGGNNP 68 (150)
T ss_pred cCCeeEEEEecCccCCccchhhHHHHhcC--CccCCCCEEEECCCCC
Confidence 46789999999997654433333333322 1235678888777776
No 83
>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d
Probab=97.02 E-value=0.0016 Score=62.53 Aligned_cols=79 Identities=18% Similarity=0.193 Sum_probs=45.8
Q ss_pred EEEEecCCCCCCCcc--cccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhcCCceEEc
Q 006938 215 FLFGDMGAATPYTTF--ERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASRVAYHVC 292 (625)
Q Consensus 215 ~v~GD~g~~~~~~~~--~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~~iP~~~v 292 (625)
++++|+|.+...... .+.........+.+++.+.+.-.++|.|+++||++....... + .+.++. ...|++.+
T Consensus 2 ~~isD~Hlg~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~d~vi~~GDl~~~~~~~~-~---~~~l~~--~~~~~~~v 75 (168)
T cd07390 2 YFTSDTHFGHANILRFCNRPFDDVEEMDEALIRNWNETVGPDDTVYHLGDFSFGGKAGT-E---LELLSR--LNGRKHLI 75 (168)
T ss_pred eEecccccCCHHHHccCCCCCCCHHHHHHHHHHHHhhhcCCCCEEEEeCCCCCCCChHH-H---HHHHHh--CCCCeEEE
Confidence 467888877542100 000011122335566666654457899999999987554222 1 222222 24689999
Q ss_pred cCCCCCC
Q 006938 293 IGNHEYD 299 (625)
Q Consensus 293 ~GNHD~~ 299 (625)
+||||..
T Consensus 76 ~GNHD~~ 82 (168)
T cd07390 76 KGNHDSS 82 (168)
T ss_pred eCCCCch
Confidence 9999974
No 84
>PHA02239 putative protein phosphatase
Probab=96.96 E-value=0.0028 Score=64.37 Aligned_cols=71 Identities=14% Similarity=0.177 Sum_probs=44.9
Q ss_pred eEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHh-hcCCceEE
Q 006938 213 IAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPV-ASRVAYHV 291 (625)
Q Consensus 213 ~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~-~~~iP~~~ 291 (625)
+++++||.|.. ...++.+++.+.......|.++++||+++.+.... +..+.+..+ ....++++
T Consensus 2 ~~~~IsDIHG~-------------~~~l~~ll~~i~~~~~~~d~li~lGD~iDrG~~s~---~v~~~l~~~~~~~~~~~~ 65 (235)
T PHA02239 2 AIYVVPDIHGE-------------YQKLLTIMDKINNERKPEETIVFLGDYVDRGKRSK---DVVNYIFDLMSNDDNVVT 65 (235)
T ss_pred eEEEEECCCCC-------------HHHHHHHHHHHhhcCCCCCEEEEecCcCCCCCChH---HHHHHHHHHhhcCCCeEE
Confidence 57899999854 22355666665432223599999999998654322 222222222 23468999
Q ss_pred ccCCCCCC
Q 006938 292 CIGNHEYD 299 (625)
Q Consensus 292 v~GNHD~~ 299 (625)
++||||..
T Consensus 66 l~GNHE~~ 73 (235)
T PHA02239 66 LLGNHDDE 73 (235)
T ss_pred EECCcHHH
Confidence 99999974
No 85
>cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro
Probab=96.91 E-value=0.0019 Score=62.16 Aligned_cols=59 Identities=25% Similarity=0.290 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHhCCCCcEEEEcCccccCCCch--hhHHHHHHhHHHhhcCCceEEccCCCCCC
Q 006938 238 STMKWILRDIEALGDKPAFVSHIGDISYARGYS--WLWDEFFALIEPVASRVAYHVCIGNHEYD 299 (625)
Q Consensus 238 ~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~--~~wd~f~~~l~~~~~~iP~~~v~GNHD~~ 299 (625)
+.++.+.+.+++ .+||.++++||+++..... ..+.. ..........+|++++.||||..
T Consensus 28 ~~~~~l~~~~~~--~~~d~lii~GDl~~~~~~~~~~~~~~-~~~~~~~~~~~~v~~i~GNHD~~ 88 (172)
T cd07391 28 DTLERLDRLIEE--YGPERLIILGDLKHSFGGLSRQEFEE-VAFLRLLAKDVDVILIRGNHDGG 88 (172)
T ss_pred HHHHHHHHHHHh--cCCCEEEEeCcccccccccCHHHHHH-HHHHHhccCCCeEEEEcccCccc
Confidence 345555554443 5899999999999754321 11221 11223334678999999999974
No 86
>PRK00166 apaH diadenosine tetraphosphatase; Reviewed
Probab=96.67 E-value=0.0045 Score=64.31 Aligned_cols=68 Identities=16% Similarity=0.340 Sum_probs=44.4
Q ss_pred eEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhcCCceEEc
Q 006938 213 IAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASRVAYHVC 292 (625)
Q Consensus 213 ~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~~iP~~~v 292 (625)
+++++||.|.. ...++.++++++ ..++.|.++++||+++.+.... +.++.+..+ ..+++++
T Consensus 2 ~~~vIGDIHG~-------------~~~l~~ll~~~~-~~~~~D~li~lGDlVdrGp~s~---~vl~~l~~l--~~~~~~V 62 (275)
T PRK00166 2 ATYAIGDIQGC-------------YDELQRLLEKID-FDPAKDTLWLVGDLVNRGPDSL---EVLRFVKSL--GDSAVTV 62 (275)
T ss_pred cEEEEEccCCC-------------HHHHHHHHHhcC-CCCCCCEEEEeCCccCCCcCHH---HHHHHHHhc--CCCeEEE
Confidence 46899999875 234555665542 1247899999999998664332 223333222 3468899
Q ss_pred cCCCCCC
Q 006938 293 IGNHEYD 299 (625)
Q Consensus 293 ~GNHD~~ 299 (625)
.||||..
T Consensus 63 lGNHD~~ 69 (275)
T PRK00166 63 LGNHDLH 69 (275)
T ss_pred ecChhHH
Confidence 9999974
No 87
>TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related. Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal.
Probab=96.64 E-value=0.0044 Score=62.49 Aligned_cols=83 Identities=12% Similarity=0.004 Sum_probs=49.7
Q ss_pred ceEEEEEecCCCCCCCcccc-cc----hhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhcC
Q 006938 212 TIAFLFGDMGAATPYTTFER-TQ----DESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASR 286 (625)
Q Consensus 212 ~~f~v~GD~g~~~~~~~~~~-~q----~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~~ 286 (625)
.+.++++|.|.+-.. .+.. .. ....++++.+.+.++ ..+||.++++||+.........|..+.+.++.+ .
T Consensus 15 ~~~LvisDlHLG~~~-~~~~~Gi~~P~~~~~~~l~rl~~li~--~~~~d~vIi~GDl~h~~~~~~~~~~~~~~l~~~--~ 89 (225)
T TIGR00024 15 GDKAVIADLHLGFER-HLDEQGVMVPGFQFREIIERALSIAD--KYGIEALIINGDLKHEFKKGLEWRFIREFIEVT--F 89 (225)
T ss_pred cCeEEEEeccCCCHH-HHHhcCCcCChhHHHHHHHHHHHHHh--hcCCCEEEEcCccccccCChHHHHHHHHHHHhc--C
Confidence 357899999987421 0100 00 011234444444333 257999999999987554434455544444433 3
Q ss_pred CceEEccCCCCCC
Q 006938 287 VAYHVCIGNHEYD 299 (625)
Q Consensus 287 iP~~~v~GNHD~~ 299 (625)
.+++.+.||||..
T Consensus 90 ~~v~~V~GNHD~~ 102 (225)
T TIGR00024 90 RDLILIRGNHDAL 102 (225)
T ss_pred CcEEEECCCCCCc
Confidence 5999999999963
No 88
>cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain. PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all
Probab=96.61 E-value=0.0043 Score=61.56 Aligned_cols=66 Identities=21% Similarity=0.248 Sum_probs=42.6
Q ss_pred eEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhcCCceEEc
Q 006938 213 IAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASRVAYHVC 292 (625)
Q Consensus 213 ~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~~iP~~~v 292 (625)
+++++||.|.. ...++.+++.+.. ..++|.++++||+++.+.... +.++.+. ..+++++
T Consensus 2 ri~~isDiHg~-------------~~~l~~~l~~~~~-~~~~d~~~~~GD~v~~g~~~~---~~~~~l~----~~~~~~v 60 (207)
T cd07424 2 RDFVVGDIHGH-------------YSLLQKALDAVGF-DPARDRLISVGDLIDRGPESL---ACLELLL----EPWFHAV 60 (207)
T ss_pred CEEEEECCCCC-------------HHHHHHHHHHcCC-CCCCCEEEEeCCcccCCCCHH---HHHHHHh----cCCEEEe
Confidence 57899999864 2244555544321 246899999999997654321 2222222 2468999
Q ss_pred cCCCCCC
Q 006938 293 IGNHEYD 299 (625)
Q Consensus 293 ~GNHD~~ 299 (625)
.||||..
T Consensus 61 ~GNhe~~ 67 (207)
T cd07424 61 RGNHEQM 67 (207)
T ss_pred ECCChHH
Confidence 9999974
No 89
>cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain. PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp
Probab=96.58 E-value=0.005 Score=62.41 Aligned_cols=71 Identities=17% Similarity=0.175 Sum_probs=45.1
Q ss_pred eEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHh-C-------CCCcEEEEcCccccCCCchhhHHHHHHhHHHhh
Q 006938 213 IAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEAL-G-------DKPAFVSHIGDISYARGYSWLWDEFFALIEPVA 284 (625)
Q Consensus 213 ~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~-~-------~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~ 284 (625)
+++++||.|.. ...++.+++++.-. + .+.|.++++||+++.+... .+-.+.+..+.
T Consensus 2 ~i~vigDIHG~-------------~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDrG~~s---~evl~~l~~l~ 65 (234)
T cd07423 2 PFDIIGDVHGC-------------YDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDRGPDS---PEVLRLVMSMV 65 (234)
T ss_pred CeEEEEECCCC-------------HHHHHHHHHHcCCccccCccccCCCCCEEEEECCccCCCCCH---HHHHHHHHHHh
Confidence 57899999886 33566666655211 1 1368999999999865432 12233333333
Q ss_pred cCCceEEccCCCCCC
Q 006938 285 SRVAYHVCIGNHEYD 299 (625)
Q Consensus 285 ~~iP~~~v~GNHD~~ 299 (625)
..-.++++.||||..
T Consensus 66 ~~~~~~~v~GNHE~~ 80 (234)
T cd07423 66 AAGAALCVPGNHDNK 80 (234)
T ss_pred hCCcEEEEECCcHHH
Confidence 334688999999973
No 90
>cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain. Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol
Probab=96.51 E-value=0.0097 Score=61.88 Aligned_cols=74 Identities=18% Similarity=0.258 Sum_probs=44.9
Q ss_pred eEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHh-C---CCCcEEEEcCccccCCCchhhHHHHHHhHHHhhcCCc
Q 006938 213 IAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEAL-G---DKPAFVSHIGDISYARGYSWLWDEFFALIEPVASRVA 288 (625)
Q Consensus 213 ~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~-~---~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~~iP 288 (625)
+++++||.|.. ...++.+++.+++. . ...+.+|++||+++.+....+--.++..+........
T Consensus 3 ~iyaIGDIHG~-------------~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVDRGPdS~eVld~L~~l~~~~~~~~ 69 (304)
T cd07421 3 VVICVGDIHGY-------------ISKLNNLWLNLQSALGPSDFASALVIFLGDYCDRGPETRKVIDFLISLPEKHPKQR 69 (304)
T ss_pred eEEEEEeccCC-------------HHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCCCCCCHHHHHHHHHHhhhcccccc
Confidence 57899999876 33566666666432 1 2357899999999876543322222222221111225
Q ss_pred eEEccCCCCCC
Q 006938 289 YHVCIGNHEYD 299 (625)
Q Consensus 289 ~~~v~GNHD~~ 299 (625)
++++.||||..
T Consensus 70 vv~LrGNHE~~ 80 (304)
T cd07421 70 HVFLCGNHDFA 80 (304)
T ss_pred eEEEecCChHH
Confidence 78899999953
No 91
>PRK04036 DNA polymerase II small subunit; Validated
Probab=96.43 E-value=0.0099 Score=67.07 Aligned_cols=82 Identities=10% Similarity=0.179 Sum_probs=51.6
Q ss_pred CcceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHH-------hCCCCcEEEEcCccccCCCc-------------
Q 006938 210 NETIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEA-------LGDKPAFVSHIGDISYARGY------------- 269 (625)
Q Consensus 210 ~~~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~-------~~~~pdfvl~~GDivy~~g~------------- 269 (625)
++.++++++|.|.+.... ....+..+++.+.. +..+++.++++||++...+.
T Consensus 242 ~~~~i~~ISDlHlgs~~~--------~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~~ 313 (504)
T PRK04036 242 EKVYAVFISDVHVGSKEF--------LEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVDI 313 (504)
T ss_pred CccEEEEEcccCCCCcch--------hHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCccchhhccchhh
Confidence 457899999999764311 11223334444431 13589999999999864221
Q ss_pred hhhHHHHHHhHHHhhcCCceEEccCCCCCC
Q 006938 270 SWLWDEFFALIEPVASRVAYHVCIGNHEYD 299 (625)
Q Consensus 270 ~~~wd~f~~~l~~~~~~iP~~~v~GNHD~~ 299 (625)
..+++.+.+.+..+...+|+++++||||..
T Consensus 314 ~~~~~~l~~~L~~L~~~i~V~~ipGNHD~~ 343 (504)
T PRK04036 314 YEQYEAAAEYLKQIPEDIKIIISPGNHDAV 343 (504)
T ss_pred HHHHHHHHHHHHhhhcCCeEEEecCCCcch
Confidence 012233444555566789999999999975
No 92
>COG5555 Cytolysin, a secreted calcineurin-like phosphatase [Cell motility and secretion]
Probab=96.40 E-value=0.0031 Score=63.93 Aligned_cols=182 Identities=21% Similarity=0.181 Sum_probs=100.3
Q ss_pred CcEEEEcCccccCCCc-------hhhHHHHHHhH----HHhhcCCceEEccCCCCCCCCCCCCCCCCCCCccCCCCCCcc
Q 006938 254 PAFVSHIGDISYARGY-------SWLWDEFFALI----EPVASRVAYHVCIGNHEYDWPLQPWKPDWSYTVYGTDGGGEC 322 (625)
Q Consensus 254 pdfvl~~GDivy~~g~-------~~~wd~f~~~l----~~~~~~iP~~~v~GNHD~~~~~~~~~~~~~~~~Y~~d~gge~ 322 (625)
|--++..||++.+.+. ..++.+|-... .++...+|+|+-.||||.+-+..+..-+|-+ . .
T Consensus 127 plGlV~ggDitddgggq~~qprEg~ql~qf~~RYsq~vG~~h~H~PvYvGlgnhdldq~gpph~~DWyR----r-----E 197 (392)
T COG5555 127 PLGLVEGGDITDDGGGQSFQPREGNQLKQFELRYSQDVGNIHMHYPVYVGLGNHDLDQKGPPHSLDWYR----R-----E 197 (392)
T ss_pred ceeEEeecceeccCCCcccCccccchhhchHhhhccCCCCceeeeeeEeccCchhhcccCCCCchhHHH----H-----H
Confidence 3456778899987652 12222221111 2344679999999999998655443333311 0 0
Q ss_pred ccccccccccCCCC---CCCCCCCCCCCCCceEEEEeCcEEEEEEeCCcc-cCC-ChHHHHHHHHHhhccccCCCCeEEE
Q 006938 323 GVPYSLKFHMPGNS---LEPTGTRAPATRNLYYSFDMGVVHFVYISTETN-FLQ-GSNQYNFIKHDLESVDRKKTPFVVV 397 (625)
Q Consensus 323 ~~~y~~~f~~P~~~---~~~~G~~~~~~~~~yYsfd~G~v~fI~LDT~~~-~~~-~~~Q~~WL~~~L~~~~r~~~~wiIV 397 (625)
...|...++-+++. +.+.. ..+....-||++.|++|.+-+.+... -.+ ...-+-||+.+|.....+..| +++
T Consensus 198 lrdyve~~Hr~~vf~Kppvp~a--tYd~l~d~ySwdwgglhlvh~hrf~Gd~~~ga~sslpwlk~dl~~~aadgrp-v~L 274 (392)
T COG5555 198 LRDYVENYHRSDVFWKPPVPPA--TYDQLKDRYSWDWGGLHLVHYHRFIGDAEPGANSSLPWLKVDLIYSAADGRP-VYL 274 (392)
T ss_pred HHHHHHhhcCcCcccCCCCCcc--cccccchheeccccceeEEEEeeeccccCCCccccCcceeccceeeccCCCc-eee
Confidence 01121111111110 00001 11234567999999999988765321 111 133568999999875545555 888
Q ss_pred EcccCCccCCCCC--------CChh------hhHHHHHHHHHHHHHcCceEEEEcCccCceeee
Q 006938 398 QGHRPMYTTSNEN--------RDAP------LRNRMLEHLEPLFVENNVTLALWGHVHRYERFC 447 (625)
Q Consensus 398 ~~H~P~y~~~~~~--------~d~~------~~~~~~~~l~~l~~ky~VdlvlsGH~H~yeR~~ 447 (625)
+.|.-.-.-..+. ++.. .....+..|...+..|+|.-.+.||.|.....+
T Consensus 275 fqhyGwdtfsteawdpAsrT~Dd~Gsgaphww~a~er~all~~lqGYNvvg~fhGhkhd~~may 338 (392)
T COG5555 275 FQHYGWDTFSTEAWDPASRTLDDTGSGAPHWWPAPERGALLFFLQGYNVVGTFHGHKHDFNMAY 338 (392)
T ss_pred hhhhCccceeccccCchhcccccCCCCCCCCCCCCCcchHHHhhcCceeEEeccccccccceee
Confidence 8887542211110 0000 111236778888889999999999999875443
No 93
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=96.28 E-value=0.026 Score=70.16 Aligned_cols=48 Identities=13% Similarity=0.160 Sum_probs=30.5
Q ss_pred CCCCeEEEEcccCCccCCCCCCChhhhHHHHHHHHHHHHH-cCceEEEEcCccCce
Q 006938 390 KKTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVE-NNVTLALWGHVHRYE 444 (625)
Q Consensus 390 ~~~~wiIV~~H~P~y~~~~~~~d~~~~~~~~~~l~~l~~k-y~VdlvlsGH~H~ye 444 (625)
.++.-+|++.|...-........ + .....|.++ -+||++|.||.|..-
T Consensus 233 ~gaDvII~l~H~G~~~~~~~~~~----e---n~~~~la~~~~gID~Il~GHsH~~~ 281 (1163)
T PRK09419 233 GGADVIVALAHSGIESEYQSSGA----E---DSVYDLAEKTKGIDAIVAGHQHGLF 281 (1163)
T ss_pred cCCCEEEEEeccCcCCCCCCCCc----c---hHHHHHHHhCCCCcEEEeCCCcccc
Confidence 56788999999987543221111 1 122234444 389999999999964
No 94
>cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain. PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of
Probab=96.27 E-value=0.0095 Score=59.95 Aligned_cols=70 Identities=16% Similarity=0.247 Sum_probs=44.0
Q ss_pred EEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhC------CCCcEEEEcCccccCCCchhhHHHHHHhHHHhhcCC
Q 006938 214 AFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALG------DKPAFVSHIGDISYARGYSWLWDEFFALIEPVASRV 287 (625)
Q Consensus 214 f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~------~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~~i 287 (625)
+.++||.|.. ...++.+++.+.... ...|.++++||+++.+.... +-++.+..+...-
T Consensus 1 ~~vIGDIHG~-------------~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~IDRGp~S~---~vl~~l~~l~~~~ 64 (222)
T cd07413 1 YDFIGDIHGH-------------AEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDRGPEIR---ELLEIVKSMVDAG 64 (222)
T ss_pred CEEEEeccCC-------------HHHHHHHHHHcCCCccccccCCCCCEEEEeCcccCCCCCHH---HHHHHHHHhhcCC
Confidence 3689999875 345666666553210 13589999999998664332 2233333333334
Q ss_pred ceEEccCCCCCC
Q 006938 288 AYHVCIGNHEYD 299 (625)
Q Consensus 288 P~~~v~GNHD~~ 299 (625)
.++++.||||..
T Consensus 65 ~~~~l~GNHE~~ 76 (222)
T cd07413 65 HALAVMGNHEFN 76 (222)
T ss_pred CEEEEEccCcHH
Confidence 688899999974
No 95
>PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=96.23 E-value=0.07 Score=63.21 Aligned_cols=89 Identities=11% Similarity=0.182 Sum_probs=45.4
Q ss_pred cceEEEEEecCCCCC-CCccccc--chhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhH---HHHH----HhH
Q 006938 211 ETIAFLFGDMGAATP-YTTFERT--QDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLW---DEFF----ALI 280 (625)
Q Consensus 211 ~~~f~v~GD~g~~~~-~~~~~~~--q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~w---d~f~----~~l 280 (625)
.++++...|+|..-. +..+... .......++.+++++++.. .--++|.+||++...-..... +... ..+
T Consensus 115 ~LtIL~TnDiHg~l~~~dy~~~~~~~~~GlaRlAtlI~~~Rae~-~NtLllD~GD~iQGSpl~~~~a~~~~~~~g~~~P~ 193 (814)
T PRK11907 115 DVRILSTTDLHTNLVNYDYYQDKPSQTLGLAKTAVLIEEAKKEN-PNVVLVDNGDTIQGTPLGTYKAIVDPVEEGEQHPM 193 (814)
T ss_pred EEEEEEEEeecCCcccccccccCccccccHHHHHHHHHHHHHhC-CCEEEEecCCCCCCCcccchhhhccccccCcchHH
Confidence 468999999997632 2112111 1112334555666655422 235899999998643211100 0000 112
Q ss_pred HHhhcCCce-EEccCCCCCCC
Q 006938 281 EPVASRVAY-HVCIGNHEYDW 300 (625)
Q Consensus 281 ~~~~~~iP~-~~v~GNHD~~~ 300 (625)
-.++..+.+ ..++||||++.
T Consensus 194 i~amN~LGyDA~tLGNHEFDy 214 (814)
T PRK11907 194 YAALEALGFDAGTLGNHEFNY 214 (814)
T ss_pred HHHHhccCCCEEEechhhccc
Confidence 222333333 45799999974
No 96
>PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional
Probab=96.17 E-value=0.012 Score=60.16 Aligned_cols=70 Identities=13% Similarity=0.141 Sum_probs=44.0
Q ss_pred eEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHh-------CCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhc
Q 006938 213 IAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEAL-------GDKPAFVSHIGDISYARGYSWLWDEFFALIEPVAS 285 (625)
Q Consensus 213 ~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~-------~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~ 285 (625)
+++++||.|.. ...++.+++.+.-. .+.-|.++++||+++.+.... +-++.+..+..
T Consensus 2 ~~~vIGDIHG~-------------~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliDRGp~S~---~vl~~~~~~~~ 65 (245)
T PRK13625 2 KYDIIGDIHGC-------------YQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTDRGPHSL---RMIEIVWELVE 65 (245)
T ss_pred ceEEEEECccC-------------HHHHHHHHHHcCCCcccCcccCCCCCEEEEECcccCCCcChH---HHHHHHHHHhh
Confidence 57899999875 33556666543210 023479999999998664332 12233333334
Q ss_pred CCceEEccCCCCC
Q 006938 286 RVAYHVCIGNHEY 298 (625)
Q Consensus 286 ~iP~~~v~GNHD~ 298 (625)
.-.++++.||||.
T Consensus 66 ~~~~~~l~GNHE~ 78 (245)
T PRK13625 66 KKAAYYVPGNHCN 78 (245)
T ss_pred CCCEEEEeCccHH
Confidence 4579999999996
No 97
>PRK11439 pphA serine/threonine protein phosphatase 1; Provisional
Probab=96.16 E-value=0.01 Score=59.55 Aligned_cols=66 Identities=18% Similarity=0.195 Sum_probs=43.3
Q ss_pred eEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhcCCceEEc
Q 006938 213 IAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASRVAYHVC 292 (625)
Q Consensus 213 ~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~~iP~~~v 292 (625)
+++++||.|.. ...++.+++++.. ..+.|-++++||+++.+.... +.++-+ ....+..+
T Consensus 18 ri~vigDIHG~-------------~~~L~~lL~~i~~-~~~~D~li~lGDlvDrGp~s~------~vl~~l-~~~~~~~v 76 (218)
T PRK11439 18 HIWLVGDIHGC-------------FEQLMRKLRHCRF-DPWRDLLISVGDLIDRGPQSL------RCLQLL-EEHWVRAV 76 (218)
T ss_pred eEEEEEcccCC-------------HHHHHHHHHhcCC-CcccCEEEEcCcccCCCcCHH------HHHHHH-HcCCceEe
Confidence 78999999886 3355666665531 236799999999998664332 122212 12346789
Q ss_pred cCCCCCC
Q 006938 293 IGNHEYD 299 (625)
Q Consensus 293 ~GNHD~~ 299 (625)
.||||..
T Consensus 77 ~GNHE~~ 83 (218)
T PRK11439 77 RGNHEQM 83 (218)
T ss_pred eCchHHH
Confidence 9999964
No 98
>cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain. ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa
Probab=96.15 E-value=0.011 Score=60.82 Aligned_cols=66 Identities=17% Similarity=0.317 Sum_probs=43.1
Q ss_pred EEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhcCCceEEccC
Q 006938 215 FLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASRVAYHVCIG 294 (625)
Q Consensus 215 ~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~~iP~~~v~G 294 (625)
+++||.|.. ...++.+++++.- .++.|.++++||+++.+.... +.++.+..+ ...+..++|
T Consensus 2 yvIGDIHG~-------------~~~L~~LL~~i~~-~~~~D~Li~lGDlVdRGp~s~---evl~~l~~l--~~~v~~VlG 62 (257)
T cd07422 2 YAIGDIQGC-------------YDELQRLLEKINF-DPAKDRLWLVGDLVNRGPDSL---ETLRFVKSL--GDSAKTVLG 62 (257)
T ss_pred EEEECCCCC-------------HHHHHHHHHhcCC-CCCCCEEEEecCcCCCCcCHH---HHHHHHHhc--CCCeEEEcC
Confidence 679999875 3356666665431 246799999999998664332 223333322 246889999
Q ss_pred CCCCC
Q 006938 295 NHEYD 299 (625)
Q Consensus 295 NHD~~ 299 (625)
|||..
T Consensus 63 NHD~~ 67 (257)
T cd07422 63 NHDLH 67 (257)
T ss_pred CchHH
Confidence 99974
No 99
>PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=96.05 E-value=0.1 Score=61.67 Aligned_cols=56 Identities=9% Similarity=0.081 Sum_probs=33.0
Q ss_pred cceEEEEEecCCCCC-CCccccc--chhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCC
Q 006938 211 ETIAFLFGDMGAATP-YTTFERT--QDESISTMKWILRDIEALGDKPAFVSHIGDISYAR 267 (625)
Q Consensus 211 ~~~f~v~GD~g~~~~-~~~~~~~--q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~ 267 (625)
.++++...|+|..-. ++++... .......++.+++++++. ..-.++|.+||++...
T Consensus 39 ~L~IL~TnDiHg~l~~~dy~~~~~~~~~Glar~AtlI~~~R~e-~~ntlllD~GD~iqGs 97 (780)
T PRK09418 39 NLRILETSDIHVNLMNYDYYQTKTDNKVGLVQTATLVNKAREE-AKNSVLFDDGDALQGT 97 (780)
T ss_pred EEEEEEEeecCCCCcCcCccccCCcCCCCHHHHHHHHHHHHHh-CCCeEEEECCCCCCCc
Confidence 578999999998642 2222211 112344455666665542 2235899999998643
No 100
>cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain. PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily
Probab=96.04 E-value=0.17 Score=52.01 Aligned_cols=49 Identities=12% Similarity=-0.004 Sum_probs=34.7
Q ss_pred CCCcEEEEcCccccCCCc-------------------hhhHHHHHHhHHHhhcCCceEEccCCCCCCC
Q 006938 252 DKPAFVSHIGDISYARGY-------------------SWLWDEFFALIEPVASRVAYHVCIGNHEYDW 300 (625)
Q Consensus 252 ~~pdfvl~~GDivy~~g~-------------------~~~wd~f~~~l~~~~~~iP~~~v~GNHD~~~ 300 (625)
.+...+|++||.+...+. ....+++.+.+..+...+|+...|||||-..
T Consensus 41 s~I~rlIIaGn~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ld~~l~~l~~~i~V~imPG~~Dp~~ 108 (257)
T cd07387 41 SSIVRLIIAGNSLSKSTQGKDSQTKARYLTKKSSAASVEAVKELDNFLSQLASSVPVDLMPGEFDPAN 108 (257)
T ss_pred cceEEEEEECCcccccccccchhhhhhccccccchhhHHHHHHHHHHHHhhhcCCeEEECCCCCCccc
Confidence 455689999999875431 1223444455566678999999999999753
No 101
>PRK09968 serine/threonine-specific protein phosphatase 2; Provisional
Probab=96.03 E-value=0.014 Score=58.50 Aligned_cols=66 Identities=17% Similarity=0.215 Sum_probs=42.4
Q ss_pred eEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhcCCceEEc
Q 006938 213 IAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASRVAYHVC 292 (625)
Q Consensus 213 ~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~~iP~~~v 292 (625)
+++++||.|.. ...++.+++.+. ...+.|.++++||+++.+....+ .++.+. ...++++
T Consensus 16 ri~visDiHg~-------------~~~l~~~l~~~~-~~~~~d~l~~lGD~vdrG~~~~~---~l~~l~----~~~~~~v 74 (218)
T PRK09968 16 HIWVVGDIHGE-------------YQLLQSRLHQLS-FCPETDLLISVGDNIDRGPESLN---VLRLLN----QPWFISV 74 (218)
T ss_pred eEEEEEeccCC-------------HHHHHHHHHhcC-CCCCCCEEEECCCCcCCCcCHHH---HHHHHh----hCCcEEE
Confidence 79999999875 234455554432 12468999999999986643321 122221 2357889
Q ss_pred cCCCCCC
Q 006938 293 IGNHEYD 299 (625)
Q Consensus 293 ~GNHD~~ 299 (625)
.||||..
T Consensus 75 ~GNHE~~ 81 (218)
T PRK09968 75 KGNHEAM 81 (218)
T ss_pred ECchHHH
Confidence 9999963
No 102
>cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain. The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate
Probab=95.92 E-value=0.015 Score=58.04 Aligned_cols=67 Identities=19% Similarity=0.199 Sum_probs=41.7
Q ss_pred EEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhc-CCceEEcc
Q 006938 215 FLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVAS-RVAYHVCI 293 (625)
Q Consensus 215 ~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~-~iP~~~v~ 293 (625)
+++||.|.. ...+..+++.+. ...+|.++++||++..+.... +-++.+..+.. ..+++.+.
T Consensus 1 ~~igDiHg~-------------~~~l~~~l~~~~--~~~~d~li~lGD~vdrg~~~~---~~l~~l~~~~~~~~~~~~l~ 62 (225)
T cd00144 1 YVIGDIHGC-------------LDDLLRLLEKIG--FPPNDKLIFLGDYVDRGPDSV---EVIDLLLALKILPDNVILLR 62 (225)
T ss_pred CEEeCCCCC-------------HHHHHHHHHHhC--CCCCCEEEEECCEeCCCCCcH---HHHHHHHHhcCCCCcEEEEc
Confidence 368999864 234555555442 246899999999997654321 22222222211 45899999
Q ss_pred CCCCCC
Q 006938 294 GNHEYD 299 (625)
Q Consensus 294 GNHD~~ 299 (625)
||||..
T Consensus 63 GNHe~~ 68 (225)
T cd00144 63 GNHEDM 68 (225)
T ss_pred cCchhh
Confidence 999975
No 103
>COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only]
Probab=95.42 E-value=0.65 Score=43.66 Aligned_cols=78 Identities=18% Similarity=0.225 Sum_probs=42.5
Q ss_pred eEEEEEecCCCCCC----CcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhcCCc
Q 006938 213 IAFLFGDMGAATPY----TTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASRVA 288 (625)
Q Consensus 213 ~f~v~GD~g~~~~~----~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~~iP 288 (625)
.+.+++|++.+... .++.+ ..+.-+.|+..+++.-..-|.+.|+||++-....+.. ....++.+...+
T Consensus 5 mmyfisDtHfgh~nvi~~~pfsn----~~ehd~vil~N~nntv~p~D~lwhLGDl~~~~n~~~~---a~~IlerLnGrk- 76 (186)
T COG4186 5 MMYFISDTHFGHKNVISMRPFSN----PDEHDEVILSNWNNTVGPDDVLWHLGDLSSGANRERA---AGLILERLNGRK- 76 (186)
T ss_pred EEEEecccccCCcceeecCCCCC----HHHHhHHHHHhHHhcCCccceEEEecccccccchhhH---HHHHHHHcCCcE-
Confidence 35677888876542 22221 1222233444444432334899999999765443222 223334443333
Q ss_pred eEEccCCCCCC
Q 006938 289 YHVCIGNHEYD 299 (625)
Q Consensus 289 ~~~v~GNHD~~ 299 (625)
..++||||-.
T Consensus 77 -hlv~GNhDk~ 86 (186)
T COG4186 77 -HLVPGNHDKC 86 (186)
T ss_pred -EEeeCCCCCC
Confidence 7899999964
No 104
>PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed
Probab=95.39 E-value=0.32 Score=56.66 Aligned_cols=89 Identities=11% Similarity=0.169 Sum_probs=46.4
Q ss_pred CcceEEEEEecCCCCC-CCccccc--chhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHH-------Hh
Q 006938 210 NETIAFLFGDMGAATP-YTTFERT--QDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFF-------AL 279 (625)
Q Consensus 210 ~~~~f~v~GD~g~~~~-~~~~~~~--q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~-------~~ 279 (625)
..++++...|+|..-. +..+... .......++.+++++++.. .--+++.+||++...... .|..+. ..
T Consensus 24 ~~L~IL~TnDlHg~l~~~dy~~~~~~~~~Glar~atli~~~R~e~-~n~llvD~GD~~qGsp~~-~~~~~~~~~~g~~~p 101 (649)
T PRK09420 24 VDLRIMETTDLHSNMMDFDYYKDKPTEKFGLVRTASLIKAARAEA-KNSVLVDNGDLIQGSPLG-DYMAAKGLKAGDVHP 101 (649)
T ss_pred ceEEEEEEcccccCccCCccccCCcccccCHHHHHHHHHHHHHhC-CCEEEEECCCcCCCchhh-hhhhhccccCCCcch
Confidence 3578999999997632 2221111 1112344556666665432 236899999998643221 111110 01
Q ss_pred HHHhhcCCce-EEccCCCCCCC
Q 006938 280 IEPVASRVAY-HVCIGNHEYDW 300 (625)
Q Consensus 280 l~~~~~~iP~-~~v~GNHD~~~ 300 (625)
+-..+..+.+ ..++||||++.
T Consensus 102 ~i~amN~lgyDa~tlGNHEFd~ 123 (649)
T PRK09420 102 VYKAMNTLDYDVGNLGNHEFNY 123 (649)
T ss_pred HHHHHHhcCCcEEeccchhhhc
Confidence 1112223333 55799999974
No 105
>TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase.
Probab=95.27 E-value=0.045 Score=56.76 Aligned_cols=67 Identities=18% Similarity=0.301 Sum_probs=42.7
Q ss_pred EEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhcCCceEEcc
Q 006938 214 AFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASRVAYHVCI 293 (625)
Q Consensus 214 f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~~iP~~~v~ 293 (625)
..++||.|.. ...++.++++++- .+..|-++++||++..+..... -++.+..+ .-.+..+.
T Consensus 3 ~YvIGDIHGc-------------~daL~~LL~~i~f-~~~~D~l~~lGDlVdRGP~sle---vL~~l~~l--~~~~~~Vl 63 (279)
T TIGR00668 3 TYLIGDLHGC-------------YDELQALLERVEF-DPGQDTLWLTGDLVARGPGSLE---VLRYVKSL--GDAVRLVL 63 (279)
T ss_pred EEEEEcccCC-------------HHHHHHHHHHhCc-CCCCCEEEEeCCccCCCCCHHH---HHHHHHhc--CCCeEEEE
Confidence 5789999876 3356667766531 2456899999999987654321 12222222 12356899
Q ss_pred CCCCCC
Q 006938 294 GNHEYD 299 (625)
Q Consensus 294 GNHD~~ 299 (625)
||||..
T Consensus 64 GNHD~~ 69 (279)
T TIGR00668 64 GNHDLH 69 (279)
T ss_pred ChhHHH
Confidence 999973
No 106
>KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=95.04 E-value=0.23 Score=46.04 Aligned_cols=84 Identities=19% Similarity=0.131 Sum_probs=57.3
Q ss_pred HHHHHHHHcCceEEEEcCccCceeeeccCCccccCCCCCCCCCCCCcEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCc
Q 006938 422 HLEPLFVENNVTLALWGHVHRYERFCPLNNFTCGSMGMDGEPSEAFPVHIVIGMAGQDWQPIWQPRPDHPDDPVFPQPMR 501 (625)
Q Consensus 422 ~l~~l~~ky~VdlvlsGH~H~yeR~~p~~~~~~~~~~~~~~~~~~g~vyIv~G~gG~~~~~~~~~~~~~~~~~~~~~p~w 501 (625)
.|.-|-++..||+.++||+|..+.+. .+|-.||--|++-..+.....
T Consensus 98 sL~~LaRqldvDILl~G~Th~f~Aye-----------------~eg~ffvnPGSaTGAfn~~~t---------------- 144 (183)
T KOG3325|consen 98 SLALLARQLDVDILLTGHTHKFEAYE-----------------HEGKFFVNPGSATGAFNVSDT---------------- 144 (183)
T ss_pred HHHHHHHhcCCcEEEeCCceeEEEEE-----------------eCCcEEeCCCcccCCCccccc----------------
Confidence 45556677899999999999988764 255567776766333221100
Q ss_pred cceeeCcccEEEEEEeCCEEEEEEEECCCCcE-EEEEEEEe
Q 006938 502 SLYRGGEFGYTRLVATKEKLTLSYVGNHDGEV-HDMVEILA 541 (625)
Q Consensus 502 s~~~~~~~Gy~~v~v~~~~L~~~~i~~~dG~v-~D~f~I~k 541 (625)
......|+.+++.++.+....|.--||+| +|+++..|
T Consensus 145 ---~~~~PSFvLmDiqg~~~v~YvY~lidgeVkVdki~ykK 182 (183)
T KOG3325|consen 145 ---DIIVPSFVLMDIQGSTVVTYVYRLIDGEVKVDKIEYKK 182 (183)
T ss_pred ---CCCCCceEEEEecCCEEEEEEeeeeCCcEEEEEEEecC
Confidence 01345799999999988777666667776 67776654
No 107
>TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase. 2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a
Probab=94.99 E-value=0.35 Score=56.23 Aligned_cols=87 Identities=13% Similarity=0.162 Sum_probs=44.7
Q ss_pred ceEEEEEecCCCCC-CCccccc--chhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHH-------HhHH
Q 006938 212 TIAFLFGDMGAATP-YTTFERT--QDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFF-------ALIE 281 (625)
Q Consensus 212 ~~f~v~GD~g~~~~-~~~~~~~--q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~-------~~l~ 281 (625)
++++...|+|..-. +..+... .......++.+++++++.. .--+++.+||++...... .|.... ..+-
T Consensus 3 l~Il~TnDlH~~l~~~dy~~~~~~~~~Glar~atli~~~R~e~-~n~lllD~GD~~qGsp~~-~~~~~~~~~~~~~~p~~ 80 (626)
T TIGR01390 3 LRIVETTDLHTNLMDYDYYKDKPTDKFGLTRTATLIKQARAEV-KNSVLVDNGDLIQGSPLG-DYMAAQGLKAGQMHPVY 80 (626)
T ss_pred EEEEEEcCCccCccCCcccCCCCCCCcCHHHHHHHHHHHHhhC-CCeEEEECCCcCCCccch-hhhhhccccCCCcChHH
Confidence 67888999987632 2111111 1112344555666655422 336899999998644221 111100 1111
Q ss_pred HhhcCCce-EEccCCCCCCC
Q 006938 282 PVASRVAY-HVCIGNHEYDW 300 (625)
Q Consensus 282 ~~~~~iP~-~~v~GNHD~~~ 300 (625)
.++..+.+ ..++||||++.
T Consensus 81 ~~mN~lgyDa~tlGNHEFd~ 100 (626)
T TIGR01390 81 KAMNLLKYDVGNLGNHEFNY 100 (626)
T ss_pred HHHhhcCccEEecccccccc
Confidence 22233333 45799999974
No 108
>KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification]
Probab=94.71 E-value=0.22 Score=52.45 Aligned_cols=48 Identities=21% Similarity=0.237 Sum_probs=31.1
Q ss_pred CCCcEEEEcCccccCCCc-----------hhhHHHHHHhHH-HhhcCCceEEccCCCCCC
Q 006938 252 DKPAFVSHIGDISYARGY-----------SWLWDEFFALIE-PVASRVAYHVCIGNHEYD 299 (625)
Q Consensus 252 ~~pdfvl~~GDivy~~g~-----------~~~wd~f~~~l~-~~~~~iP~~~v~GNHD~~ 299 (625)
-++|++|..||+---.+. ......|++... ...+.+|.+.+=||||..
T Consensus 29 tkVDLLlccGDFQavRn~~D~~siavPpKy~~m~~F~~YYsge~~APVlTIFIGGNHEAs 88 (456)
T KOG2863|consen 29 TKVDLLLCCGDFQAVRNEQDLKSIAVPPKYRRMGDFYKYYSGEIKAPVLTIFIGGNHEAS 88 (456)
T ss_pred CCccEEEEccchHhhcchhhcccccCCHHHHHHHHHHHHhCCcccCceeEEEecCchHHH
Confidence 478999999998332211 112233444432 345789999999999985
No 109
>cd07381 MPP_CapA CapA and related proteins, metallophosphatase domain. CapA is one of three membrane-associated enzymes in Bacillus anthracis that is required for synthesis of gamma-polyglutamic acid (PGA), a major component of the bacterial capsule. The YwtB and PgsA proteins of Bacillus subtilis are closely related to CapA and are also included in this alignment model. CapA belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal
Probab=94.55 E-value=0.44 Score=48.28 Aligned_cols=61 Identities=18% Similarity=0.214 Sum_probs=36.5
Q ss_pred HHHHHHhhccccCCCCeEEEEcccCCccCCCCCCChhhhHHHHHHHHHHHHHcCceEEEEcCccCceee
Q 006938 378 NFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVENNVTLALWGHVHRYERF 446 (625)
Q Consensus 378 ~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~~~d~~~~~~~~~~l~~l~~ky~VdlvlsGH~H~yeR~ 446 (625)
+-+++.+++++ ++.+.+||..|...-.... . ... .+.+...+...++|+++.||.|..+-.
T Consensus 162 ~~~~~~i~~lr-~~~D~vIv~~H~G~e~~~~---p---~~~-~~~la~~l~~~G~D~IiG~H~Hv~q~~ 222 (239)
T cd07381 162 ERIAADIAEAK-KKADIVIVSLHWGVEYSYY---P---TPE-QRELARALIDAGADLVIGHHPHVLQGI 222 (239)
T ss_pred HHHHHHHHHHh-hcCCEEEEEecCcccCCCC---C---CHH-HHHHHHHHHHCCCCEEEcCCCCcCCCe
Confidence 34555555544 2378899999964422111 0 111 233444444579999999999987643
No 110
>PF13277 YmdB: YmdB-like protein; PDB: 2CV9_B 2Z06_C.
Probab=93.91 E-value=5.8 Score=40.53 Aligned_cols=182 Identities=16% Similarity=0.160 Sum_probs=84.3
Q ss_pred HHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhcCCceEEccCCCCCCCCCCCCCCCCCCCccCC
Q 006938 237 ISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASRVAYHVCIGNHEYDWPLQPWKPDWSYTVYGT 316 (625)
Q Consensus 237 ~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~~iP~~~v~GNHD~~~~~~~~~~~~~~~~Y~~ 316 (625)
...++..+..+++ ..++||||..|.++-.+ ..-..+.+.+. +...+-++ +.|||=++... ++
T Consensus 12 r~~v~~~Lp~L~~-~~~~DfVIaNgENaa~G-~Git~~~~~~L---~~~GvDvi-T~GNH~wdkke----------i~-- 73 (253)
T PF13277_consen 12 RRAVKEHLPELKE-EYGIDFVIANGENAAGG-FGITPKIAEEL---FKAGVDVI-TMGNHIWDKKE----------IF-- 73 (253)
T ss_dssp HHHHHHHHHHHGG---G-SEEEEE-TTTTTT-SS--HHHHHHH---HHHT-SEE-E--TTTTSSTT----------HH--
T ss_pred HHHHHHHHHHHHh-hcCCCEEEECCcccCCC-CCCCHHHHHHH---HhcCCCEE-ecCcccccCcH----------HH--
Confidence 3445555555543 35899999999998543 22211221111 13456665 69999986321 01
Q ss_pred CCCCccccccc---cccccCCCCCCCCCCCCCCCCCceEEEEeCcEEEEEEeCCc--ccCCChHHHHHHHHHhhccccCC
Q 006938 317 DGGGECGVPYS---LKFHMPGNSLEPTGTRAPATRNLYYSFDMGVVHFVYISTET--NFLQGSNQYNFIKHDLESVDRKK 391 (625)
Q Consensus 317 d~gge~~~~y~---~~f~~P~~~~~~~G~~~~~~~~~yYsfd~G~v~fI~LDT~~--~~~~~~~Q~~WL~~~L~~~~r~~ 391 (625)
.|. .+.--|.|-+. +. -+..|..++.++..+-++|-.. .......-..-+++.|++. +.+
T Consensus 74 --------~~i~~~~~ilRPaN~p~--~~----pG~G~~i~~~~g~kv~ViNl~Gr~fm~~~~~PF~~~d~~l~~l-~~~ 138 (253)
T PF13277_consen 74 --------DFIDKEPRILRPANYPP--GT----PGRGYRIFEKNGKKVAVINLMGRVFMPPIDCPFRAADRLLEEL-KEE 138 (253)
T ss_dssp --------HHHHH-SSEE--TTS-T--T-----SSBSEEEEEETTEEEEEEEEE--TTS---S-HHHHHHHHHHH-----
T ss_pred --------HHHhcCCCcEECCCCCC--CC----CcCcEEEEEECCEEEEEEECcccccCCCCCChHHHHHHHHHhc-ccc
Confidence 011 12223443221 11 1346888999998888776421 1111122334444444443 256
Q ss_pred CCeEEEEcccCCccCCCCCCChhhhHHHHHHHHHHHHHcCceEEEEcCccCceeeeccCCccccCCCCCCCCCCCCcEEE
Q 006938 392 TPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVENNVTLALWGHVHRYERFCPLNNFTCGSMGMDGEPSEAFPVHI 471 (625)
Q Consensus 392 ~~wiIV~~H~P~y~~~~~~~d~~~~~~~~~~l~~l~~ky~VdlvlsGH~H~yeR~~p~~~~~~~~~~~~~~~~~~g~vyI 471 (625)
.+.+||=+|.=.- .++ .-.-.+..-+|.+|+--|+|.-. .+.++. |+|+-||
T Consensus 139 ~~~iiVDFHAEaT-----------SEK---~A~g~~lDGrvsaV~GTHTHVqT-----aDerIL---------p~GTaYi 190 (253)
T PF13277_consen 139 TDIIIVDFHAEAT-----------SEK---QAMGWYLDGRVSAVVGTHTHVQT-----ADERIL---------PGGTAYI 190 (253)
T ss_dssp -SEEEEEEE-S-H-----------HHH---HHHHHHHBTTBSEEEEESSSS-B-----S--EE----------TTS-EEE
T ss_pred CCEEEEEeecCcH-----------HHH---HHHHHHhCCcEEEEEeCCCCccC-----chhhcc---------CCCCEEE
Confidence 7889999996211 121 12234555689999999999732 111111 5788898
Q ss_pred E-ECCCCCC
Q 006938 472 V-IGMAGQD 479 (625)
Q Consensus 472 v-~G~gG~~ 479 (625)
. +|+.|..
T Consensus 191 TDvGMtG~~ 199 (253)
T PF13277_consen 191 TDVGMTGPY 199 (253)
T ss_dssp S---EBEES
T ss_pred ecCccccCc
Confidence 5 4777764
No 111
>PF00041 fn3: Fibronectin type III domain; InterPro: IPR003961 Fibronectins are multi-domain glycoproteins found in a soluble form in plasma, and in an insoluble form in loose connective tissue and basement membranes []. They contain multiple copies of 3 repeat regions (types I, II and III), which bind to a variety of substances including heparin, collagen, DNA, actin, fibrin and fibronectin receptors on cell surfaces. The wide variety of these substances means that fibronectins are involved in a number of important functions: e.g., wound healing; cell adhesion; blood coagulation; cell differentiation and migration; maintenance of the cellular cytoskeleton; and tumour metastasis []. The role of fibronectin in cell differentiation is demonstrated by the marked reduction in the expression of its gene when neoplastic transformation occurs. Cell attachment has been found to be mediated by the binding of the tetrapeptide RGDS to integrins on the cell surface [], although related sequences can also display cell adhesion activity. Plasma fibronectin occurs as a dimer of 2 different subunits, linked together by 2 disulphide bonds near the C terminus. The difference in the 2 chains occurs in the type III repeat region and is caused by alternative splicing of the mRNA from one gene []. The observation that, in a given protein, an individual repeat of one of the 3 types (e.g., the first FnIII repeat) shows much less similarity to its subsequent tandem repeats within that protein than to its equivalent repeat between fibronectins from other species, has suggested that the repeating structure of fibronectin arose at an early stage of evolution. It also seems to suggest that the structure is subject to high selective pressure []. The fibronectin type III repeat region is an approximately 100 amino acid domain, different tandem repeats of which contain binding sites for DNA, heparin and the cell surface []. The superfamily of sequences believed to contain FnIII repeats represents 45 different families, the majority of which are involved in cell surface binding in some manner, or are receptor protein tyrosine kinases, or cytokine receptors.; GO: 0005515 protein binding; PDB: 1UEM_A 1TDQ_A 1X5I_A 2IC2_B 2IBG_C 2IBB_A 3R8Q_A 2FNB_A 1FNH_A 2EDB_A ....
Probab=93.89 E-value=0.63 Score=38.00 Aligned_cols=70 Identities=16% Similarity=0.190 Sum_probs=45.5
Q ss_pred CceeEEEEecCCCCceEEEEEecC--C---CceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEEE
Q 006938 100 GPRAGALGFTEDASEMRVMFLAED--G---EKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFDA 174 (625)
Q Consensus 100 ~P~qv~L~~~~~~~~~~V~W~T~~--~---~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~a 174 (625)
+|+.+++.-. .++++.|.|.... . ..-.|+|....+... ....... +-.+.+
T Consensus 2 ~P~~l~v~~~-~~~sv~v~W~~~~~~~~~~~~y~v~~~~~~~~~~----~~~~~~~------------------~~~~~~ 58 (85)
T PF00041_consen 2 APENLSVSNI-SPTSVTVSWKPPSSGNGPITGYRVEYRSVNSTSD----WQEVTVP------------------GNETSY 58 (85)
T ss_dssp SSEEEEEEEE-CSSEEEEEEEESSSTSSSESEEEEEEEETTSSSE----EEEEEEE------------------TTSSEE
T ss_pred cCcCeEEEEC-CCCEEEEEEECCCCCCCCeeEEEEEEEeccccee----eeeeeee------------------eeeeee
Confidence 4777777775 4689999998773 1 235678866654320 1111111 112377
Q ss_pred EEcCCCCCcEEEEEEecC
Q 006938 175 VIKGLKKGVRYYYKVGSD 192 (625)
Q Consensus 175 ~ltgL~PgT~Y~YrV~~~ 192 (625)
+++||+|+|.|.+||..-
T Consensus 59 ~i~~L~p~t~Y~~~v~a~ 76 (85)
T PF00041_consen 59 TITGLQPGTTYEFRVRAV 76 (85)
T ss_dssp EEESCCTTSEEEEEEEEE
T ss_pred eeccCCCCCEEEEEEEEE
Confidence 789999999999999863
No 112
>KOG4419 consensus 5' nucleotidase [Nucleotide transport and metabolism]
Probab=92.40 E-value=0.85 Score=51.33 Aligned_cols=58 Identities=14% Similarity=0.243 Sum_probs=36.9
Q ss_pred hHHHHHHHHHhhccccCCCCeEEEEcccCCccCCCCCCChhhhHHHHHHHHHHHHHc-CceE-EEEcCccCce
Q 006938 374 SNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVEN-NVTL-ALWGHVHRYE 444 (625)
Q Consensus 374 ~~Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~~~d~~~~~~~~~~l~~l~~ky-~Vdl-vlsGH~H~ye 444 (625)
-.|.+|-.+.++. .+.+-+|+++|.|.-... ... -.+..+...+ ++++ ||-||.|...
T Consensus 211 i~~~~~~~~m~~~---~~idlii~lgH~~~~~~~-------e~~---~~~~~ir~~~p~t~IqviGGHshird 270 (602)
T KOG4419|consen 211 ITQSEWEQDMVNT---TDIDLIIALGHSPVRDDD-------EWK---SLHAEIRKVHPNTPIQVIGGHSHIRD 270 (602)
T ss_pred HhccchHHHHhhc---cCccEEEEecccccccch-------hhh---hHHHHHhhhCCCCceEEECchhhhhh
Confidence 4577888888876 556668899999874321 111 1233333333 6777 9999999843
No 113
>COG1692 Calcineurin-like phosphoesterase [General function prediction only]
Probab=92.23 E-value=7.4 Score=39.48 Aligned_cols=197 Identities=17% Similarity=0.175 Sum_probs=103.4
Q ss_pred eEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhcCCceEEc
Q 006938 213 IAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASRVAYHVC 292 (625)
Q Consensus 213 ~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~~iP~~~v 292 (625)
|++++||+=... ....++.-+..++. +-++||+|..|-++- +|..-.|+.+.+.++ ..+-++ +
T Consensus 2 riLfiGDvvGk~-----------Gr~~v~~~Lp~lk~-kyk~dfvI~N~ENaa-~G~Git~k~y~~l~~---~G~dvi-T 64 (266)
T COG1692 2 RILFIGDVVGKP-----------GRKAVKEHLPQLKS-KYKIDFVIVNGENAA-GGFGITEKIYKELLE---AGADVI-T 64 (266)
T ss_pred eEEEEecccCcc-----------hHHHHHHHhHHHHH-hhcCcEEEEcCcccc-CCcCCCHHHHHHHHH---hCCCEE-e
Confidence 688999984332 12334444444443 357999999999974 444445555544432 355554 6
Q ss_pred cCCCCCCCCCCCCCCCCCCCccCCCCCCccccccccccccCCCCCCCCCCCCCCCCCceEEEEeCcEEEEEEeCCc--cc
Q 006938 293 IGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKFHMPGNSLEPTGTRAPATRNLYYSFDMGVVHFVYISTET--NF 370 (625)
Q Consensus 293 ~GNHD~~~~~~~~~~~~~~~~Y~~d~gge~~~~y~~~f~~P~~~~~~~G~~~~~~~~~yYsfd~G~v~fI~LDT~~--~~ 370 (625)
.|||=++... +|.- ..=..++--|.|-+. +. .+..|+-|+..+..+.++|-.. ..
T Consensus 65 ~GNH~wd~~e----------i~~~-------i~~~~~ilRP~N~p~--~~----~G~G~~~f~~ng~ki~V~Nl~Grv~m 121 (266)
T COG1692 65 LGNHTWDQKE----------ILDF-------IDNADRILRPANYPD--GT----PGKGSRIFKINGKKLAVINLMGRVFM 121 (266)
T ss_pred cccccccchH----------HHHH-------hhcccceeccCCCCC--CC----CcceEEEEEeCCcEEEEEEeeccccC
Confidence 9999986321 0100 000112223444221 11 1334666777776666665321 11
Q ss_pred CC-ChHHHHHHHHHhhccccCCCCeEEEEcccCCccCCCCCCChhhhHHHHHHHHHHHHHcCceEEEEcCccCceeeecc
Q 006938 371 LQ-GSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVENNVTLALWGHVHRYERFCPL 449 (625)
Q Consensus 371 ~~-~~~Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~~~d~~~~~~~~~~l~~l~~ky~VdlvlsGH~H~yeR~~p~ 449 (625)
.. -..-..=+++.|.+.+ .+++.+||-+|.-.-+. . ++| -++-+-.|.+|+-=|+|.-.--
T Consensus 122 ~~~~d~PF~~~d~l~~~~~-~~~~~iiVDFHAEtTSE-----------K--~a~-g~yldGrvsavvGTHTHV~TaD--- 183 (266)
T COG1692 122 PPALDNPFKAADKLLDEIK-LGTDLIIVDFHAETTSE-----------K--NAF-GWYLDGRVSAVVGTHTHVPTAD--- 183 (266)
T ss_pred ccccCCHHHHHHHHHHhCc-cCCceEEEEccccchhh-----------h--hhh-heEEcCeEEEEEeccCcccccc---
Confidence 10 1222334555555543 45567999999632211 1 111 1223347899999999984322
Q ss_pred CCccccCCCCCCCCCCCCcEEEEE-CCCCC
Q 006938 450 NNFTCGSMGMDGEPSEAFPVHIVI-GMAGQ 478 (625)
Q Consensus 450 ~~~~~~~~~~~~~~~~~g~vyIv~-G~gG~ 478 (625)
.++. ++|+.||.- |+.|.
T Consensus 184 --~rIL---------~~GTayiTDvGMtG~ 202 (266)
T COG1692 184 --ERIL---------PKGTAYITDVGMTGP 202 (266)
T ss_pred --ceec---------CCCcEEEecCccccc
Confidence 1211 578888864 66665
No 114
>cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain. RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all
Probab=91.94 E-value=0.5 Score=50.17 Aligned_cols=70 Identities=17% Similarity=0.105 Sum_probs=40.5
Q ss_pred eEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhh--cCCceE
Q 006938 213 IAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVA--SRVAYH 290 (625)
Q Consensus 213 ~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~--~~iP~~ 290 (625)
+++++||.|.. ...+..+++... ....-+-.+++||+++.+...-+ . +..+-.+. ..--++
T Consensus 52 ~~~vvGDiHG~-------------~~dL~~il~~~g-~~~~~~~~lFLGDyVDRG~~s~E--v-l~ll~~lk~~~p~~v~ 114 (321)
T cd07420 52 QVTICGDLHGK-------------LDDLFLIFYKNG-LPSPENPYVFNGDFVDRGKRSIE--I-LIILFAFFLVYPNEVH 114 (321)
T ss_pred CeEEEEeCCCC-------------HHHHHHHHHHcC-CCCccceEEEeccccCCCCCcHH--H-HHHHHHHhhcCCCcEE
Confidence 57899999875 233444544321 11123679999999987643321 1 12221222 123488
Q ss_pred EccCCCCCC
Q 006938 291 VCIGNHEYD 299 (625)
Q Consensus 291 ~v~GNHD~~ 299 (625)
.+.||||..
T Consensus 115 llRGNHE~~ 123 (321)
T cd07420 115 LNRGNHEDH 123 (321)
T ss_pred EecCchhhh
Confidence 899999985
No 115
>cd07416 MPP_PP2B PP2B, metallophosphatase domain. PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G
Probab=91.08 E-value=0.65 Score=49.07 Aligned_cols=69 Identities=14% Similarity=0.093 Sum_probs=40.7
Q ss_pred eEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhcCC--ceE
Q 006938 213 IAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASRV--AYH 290 (625)
Q Consensus 213 ~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~~i--P~~ 290 (625)
.++++||.|.. ...+..+++.+. .+..+-++++||+++.+.... +-+..+..+.-.. -++
T Consensus 44 ~i~ViGDIHG~-------------~~dL~~l~~~~g--~~~~~~ylFLGDyVDRG~~s~---Evi~lL~~lki~~p~~v~ 105 (305)
T cd07416 44 PVTVCGDIHGQ-------------FYDLLKLFEVGG--SPANTRYLFLGDYVDRGYFSI---ECVLYLWALKILYPKTLF 105 (305)
T ss_pred CEEEEEeCCCC-------------HHHHHHHHHhcC--CCCCceEEEECCccCCCCChH---HHHHHHHHHHhhcCCCEE
Confidence 47899999865 223444444321 133478999999997654322 1122222222233 478
Q ss_pred EccCCCCCC
Q 006938 291 VCIGNHEYD 299 (625)
Q Consensus 291 ~v~GNHD~~ 299 (625)
.+.||||..
T Consensus 106 lLRGNHE~~ 114 (305)
T cd07416 106 LLRGNHECR 114 (305)
T ss_pred EEeCCCcHH
Confidence 899999974
No 116
>COG1407 Predicted ICC-like phosphoesterases [General function prediction only]
Probab=90.97 E-value=0.7 Score=46.63 Aligned_cols=82 Identities=18% Similarity=0.180 Sum_probs=44.7
Q ss_pred eEEEEEecCCCCCCC------cccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCc--hhhHHHHHHhHHHhh
Q 006938 213 IAFLFGDMGAATPYT------TFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGY--SWLWDEFFALIEPVA 284 (625)
Q Consensus 213 ~f~v~GD~g~~~~~~------~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~--~~~wd~f~~~l~~~~ 284 (625)
+.++++|.|.+-... ...+.|. ..+.+.+.+-++ ..+|+-+|.+||+-.+-+. ..+|+..-..+ ...
T Consensus 21 ~~lVvADlHlG~e~~~~r~Gi~lP~~~~--~~~~~~l~~ii~--~~~p~~lIilGD~KH~~~~~~~~e~~~~~~f~-~~~ 95 (235)
T COG1407 21 RTLVVADLHLGYEESLARRGINLPRYQT--DRILKRLDRIIE--RYGPKRLIILGDLKHEFGKSLRQEKEEVREFL-ELL 95 (235)
T ss_pred cEEEEEecccchhHHHHhcCcccCchhH--HHHHHHHHHHHH--hcCCCEEEEcCccccccCccccccHHHHHHHH-HHh
Confidence 578999998863210 0000111 112222222233 3589999999999765443 23343322222 223
Q ss_pred cCCceEEccCCCCCC
Q 006938 285 SRVAYHVCIGNHEYD 299 (625)
Q Consensus 285 ~~iP~~~v~GNHD~~ 299 (625)
...-++.+.||||-.
T Consensus 96 ~~~evi~i~GNHD~~ 110 (235)
T COG1407 96 DEREVIIIRGNHDNG 110 (235)
T ss_pred ccCcEEEEeccCCCc
Confidence 333599999999975
No 117
>smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain. Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members.
Probab=90.87 E-value=0.8 Score=47.53 Aligned_cols=69 Identities=16% Similarity=0.124 Sum_probs=41.4
Q ss_pred eEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhh--cCCceE
Q 006938 213 IAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVA--SRVAYH 290 (625)
Q Consensus 213 ~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~--~~iP~~ 290 (625)
+++++||.|.. ...+..+++.+. ....+-++++||+++.+.... +-+..+..+. ..--++
T Consensus 29 ~i~vvGDiHG~-------------~~~l~~ll~~~~--~~~~~~~vfLGD~VDrG~~s~---e~l~~l~~lk~~~p~~v~ 90 (271)
T smart00156 29 PVTVCGDIHGQ-------------FDDLLRLFDLNG--PPPDTNYVFLGDYVDRGPFSI---EVILLLFALKILYPNRVV 90 (271)
T ss_pred CEEEEEeCcCC-------------HHHHHHHHHHcC--CCCCceEEEeCCccCCCCChH---HHHHHHHHHHhcCCCCEE
Confidence 47899999865 233444554332 234578999999997654322 1122222222 233578
Q ss_pred EccCCCCCC
Q 006938 291 VCIGNHEYD 299 (625)
Q Consensus 291 ~v~GNHD~~ 299 (625)
.+.||||..
T Consensus 91 llrGNHE~~ 99 (271)
T smart00156 91 LLRGNHESR 99 (271)
T ss_pred EEeccccHH
Confidence 899999985
No 118
>cd07418 MPP_PP7 PP7, metallophosphatase domain. PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-,
Probab=90.43 E-value=0.71 Score=50.01 Aligned_cols=71 Identities=21% Similarity=0.282 Sum_probs=40.8
Q ss_pred ceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhc--CCce
Q 006938 212 TIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVAS--RVAY 289 (625)
Q Consensus 212 ~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~--~iP~ 289 (625)
..+.++||.|.. ...+..+++.+. ....-+.+|++||+++.+.... +-+..+..+.- .--+
T Consensus 66 ~~i~VvGDIHG~-------------~~dL~~ll~~~g-~~~~~~~ylFLGDyVDRGp~Sl---Evl~lL~~lki~~p~~v 128 (377)
T cd07418 66 CEVVVVGDVHGQ-------------LHDVLFLLEDAG-FPDQNRFYVFNGDYVDRGAWGL---ETFLLLLSWKVLLPDRV 128 (377)
T ss_pred CCEEEEEecCCC-------------HHHHHHHHHHhC-CCCCCceEEEeccccCCCCChH---HHHHHHHHHhhccCCeE
Confidence 358999999886 234445554321 1111246899999997654322 11222222222 2347
Q ss_pred EEccCCCCCC
Q 006938 290 HVCIGNHEYD 299 (625)
Q Consensus 290 ~~v~GNHD~~ 299 (625)
+.+.||||..
T Consensus 129 ~lLRGNHE~~ 138 (377)
T cd07418 129 YLLRGNHESK 138 (377)
T ss_pred EEEeeecccc
Confidence 8899999985
No 119
>KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair]
Probab=90.32 E-value=1.2 Score=49.65 Aligned_cols=56 Identities=16% Similarity=0.060 Sum_probs=39.4
Q ss_pred CcceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCC
Q 006938 210 NETIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARG 268 (625)
Q Consensus 210 ~~~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g 268 (625)
+.+++++..|.|++-.-+... ....+..+++.|++-.+ .++.||||..||++-.+.
T Consensus 12 ntirILVaTD~HlGY~EkD~v-rg~DSf~tFeEIl~iA~--e~~VDmiLlGGDLFHeNk 67 (646)
T KOG2310|consen 12 NTIRILVATDNHLGYGEKDAV-RGDDSFVTFEEILEIAQ--ENDVDMILLGGDLFHENK 67 (646)
T ss_pred cceEEEEeecCccccccCCcc-cccchHHHHHHHHHHHH--hcCCcEEEecCcccccCC
Confidence 457999999999873322111 23456678888876443 479999999999987664
No 120
>COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair]
Probab=89.04 E-value=1.3 Score=48.84 Aligned_cols=83 Identities=14% Similarity=0.261 Sum_probs=50.9
Q ss_pred CcceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHH---hCCCCcEEEEcCccccCCC-------------chhhH
Q 006938 210 NETIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEA---LGDKPAFVSHIGDISYARG-------------YSWLW 273 (625)
Q Consensus 210 ~~~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~---~~~~pdfvl~~GDivy~~g-------------~~~~w 273 (625)
+..++++++|.+.+.. .| ....+...++.++- ++.+..+++.+||.++.-| ...++
T Consensus 224 e~v~v~~isDih~GSk--~F------~~~~f~~fi~wl~g~~~~a~~vkyliiagd~VDGigiYpgq~~eL~i~di~~qy 295 (481)
T COG1311 224 ERVYVALISDIHRGSK--EF------LEDEFEKFIDWLNGPGDLASRVKYLIIAGDVVDGIGIYPGQEEELVIADIYEQY 295 (481)
T ss_pred cceEEEEEeeeecccH--HH------HHHHHHHHHHHhcCCcccccceEEEEEecccccccccccCcccccccccchHHH
Confidence 3467899999998742 11 11122222322221 3456689999999987432 12345
Q ss_pred HHHHHhHHHhhcCCceEEccCCCCCCC
Q 006938 274 DEFFALIEPVASRVAYHVCIGNHEYDW 300 (625)
Q Consensus 274 d~f~~~l~~~~~~iP~~~v~GNHD~~~ 300 (625)
+++-+.+..+-..+-+++.|||||...
T Consensus 296 ~~~A~~L~~vp~~I~v~i~PGnhDa~r 322 (481)
T COG1311 296 EELAEFLDQVPEHIKVFIMPGNHDAVR 322 (481)
T ss_pred HHHHHHHhhCCCCceEEEecCCCCccc
Confidence 555455555556778999999999864
No 121
>cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain. PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2
Probab=88.96 E-value=1.2 Score=46.60 Aligned_cols=69 Identities=20% Similarity=0.151 Sum_probs=40.3
Q ss_pred eEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhh--cCCceE
Q 006938 213 IAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVA--SRVAYH 290 (625)
Q Consensus 213 ~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~--~~iP~~ 290 (625)
.+.++||.|.. ...+..+++... .+..+-++++||+++.+.... +-+..+..+. ..-.++
T Consensus 43 ~i~vvGDIHG~-------------~~dL~~ll~~~~--~~~~~~~lfLGDyVDRG~~s~---evl~ll~~lk~~~p~~v~ 104 (285)
T cd07415 43 PVTVCGDIHGQ-------------FYDLLELFRVGG--DPPDTNYLFLGDYVDRGYYSV---ETFLLLLALKVRYPDRIT 104 (285)
T ss_pred CEEEEEeCCCC-------------HHHHHHHHHHcC--CCCCCeEEEEeEECCCCcCHH---HHHHHHHHHhhcCCCcEE
Confidence 37889999864 223444444321 134467889999997654322 1122222222 233589
Q ss_pred EccCCCCCC
Q 006938 291 VCIGNHEYD 299 (625)
Q Consensus 291 ~v~GNHD~~ 299 (625)
.+.||||..
T Consensus 105 llrGNHE~~ 113 (285)
T cd07415 105 LLRGNHESR 113 (285)
T ss_pred EEecccchH
Confidence 999999974
No 122
>cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain. PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg
Probab=88.70 E-value=1.1 Score=47.00 Aligned_cols=69 Identities=14% Similarity=0.082 Sum_probs=39.8
Q ss_pred eEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhcCC--ceE
Q 006938 213 IAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASRV--AYH 290 (625)
Q Consensus 213 ~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~~i--P~~ 290 (625)
.++++||.|.. ...+..+++... .+..+-++++||++..+....+ .+..+..+.-.. -++
T Consensus 51 ~i~viGDIHG~-------------~~~L~~l~~~~~--~~~~~~~lfLGDyVDRG~~s~e---~i~ll~~lk~~~p~~i~ 112 (293)
T cd07414 51 PLKICGDIHGQ-------------YYDLLRLFEYGG--FPPESNYLFLGDYVDRGKQSLE---TICLLLAYKIKYPENFF 112 (293)
T ss_pred ceEEEEecCCC-------------HHHHHHHHHhcC--CCCcceEEEEeeEecCCCCcHH---HHHHHHHhhhhCCCcEE
Confidence 47889999864 223444444322 1344678899999976543221 111222222222 378
Q ss_pred EccCCCCCC
Q 006938 291 VCIGNHEYD 299 (625)
Q Consensus 291 ~v~GNHD~~ 299 (625)
.+.||||..
T Consensus 113 llrGNHE~~ 121 (293)
T cd07414 113 LLRGNHECA 121 (293)
T ss_pred EEecccchh
Confidence 899999985
No 123
>PTZ00239 serine/threonine protein phosphatase 2A; Provisional
Probab=88.47 E-value=1.3 Score=46.79 Aligned_cols=68 Identities=18% Similarity=0.139 Sum_probs=39.4
Q ss_pred EEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhcCC--ceEE
Q 006938 214 AFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASRV--AYHV 291 (625)
Q Consensus 214 f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~~i--P~~~ 291 (625)
++++||.|.. ...+..+++.+. ....+-++++||+++.+.... +.+..+..+.-.. -++.
T Consensus 45 i~vvGDIHG~-------------~~~L~~l~~~~~--~~~~~~~lfLGDyVDRG~~s~---evl~ll~~lk~~~p~~v~l 106 (303)
T PTZ00239 45 VNVCGDIHGQ-------------FYDLQALFKEGG--DIPNANYIFIGDFVDRGYNSV---ETMEYLLCLKVKYPGNITL 106 (303)
T ss_pred EEEEEeCCCC-------------HHHHHHHHHhcC--CCCCceEEEeeeEcCCCCCHH---HHHHHHHHhhhcCCCcEEE
Confidence 7889999864 223444444321 123467899999998664322 1122222222223 3788
Q ss_pred ccCCCCCC
Q 006938 292 CIGNHEYD 299 (625)
Q Consensus 292 v~GNHD~~ 299 (625)
+.||||..
T Consensus 107 lrGNHE~~ 114 (303)
T PTZ00239 107 LRGNHESR 114 (303)
T ss_pred EecccchH
Confidence 99999974
No 124
>cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain. Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel
Probab=86.19 E-value=1.6 Score=46.29 Aligned_cols=23 Identities=17% Similarity=0.263 Sum_probs=19.5
Q ss_pred HHHHHHHHHHcCceEEEEcCccC
Q 006938 420 LEHLEPLFVENNVTLALWGHVHR 442 (625)
Q Consensus 420 ~~~l~~l~~ky~VdlvlsGH~H~ 442 (625)
.+.+...+++++.++++-||.=.
T Consensus 233 ~~~~~~Fl~~n~l~~iiR~He~~ 255 (316)
T cd07417 233 PDVTKRFLEENNLEYIIRSHEVK 255 (316)
T ss_pred HHHHHHHHHHcCCcEEEECCccc
Confidence 45677889999999999999854
No 125
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=86.17 E-value=2.8 Score=48.89 Aligned_cols=73 Identities=25% Similarity=0.334 Sum_probs=49.7
Q ss_pred CCceEEEEEecCC-----CceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEEEEEcCCCCCcEEE
Q 006938 112 ASEMRVMFLAEDG-----EKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFDAVIKGLKKGVRYY 186 (625)
Q Consensus 112 ~~~~~V~W~T~~~-----~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~a~ltgL~PgT~Y~ 186 (625)
.++++++|.-.+. ..-.|+|-++...- .+|... ..-..+|+++||+|||.|-
T Consensus 456 ~~sitlsW~~p~~png~ildYEvky~ek~~~e--------~~~~~~---------------~t~~~~~ti~gL~p~t~Yv 512 (996)
T KOG0196|consen 456 SDSITLSWSEPDQPNGVILDYEVKYYEKDEDE--------RSYSTL---------------KTKTTTATITGLKPGTVYV 512 (996)
T ss_pred cCceEEecCCCCCCCCcceeEEEEEeeccccc--------cceeEE---------------ecccceEEeeccCCCcEEE
Confidence 5889999976542 24567777664211 111100 0123588999999999999
Q ss_pred EEEecCC----CCcceeEEEEcCCC
Q 006938 187 YKVGSDS----KGWSETHSFVSRNE 207 (625)
Q Consensus 187 YrV~~~~----~~~S~~~~F~T~p~ 207 (625)
+||.... +..|....|.|.+.
T Consensus 513 fqVRarT~aG~G~~S~~~~fqT~~~ 537 (996)
T KOG0196|consen 513 FQVRARTAAGYGPYSGKHEFQTLPS 537 (996)
T ss_pred EEEEEecccCCCCCCCceeeeecCc
Confidence 9999743 46789999999886
No 126
>PTZ00244 serine/threonine-protein phosphatase PP1; Provisional
Probab=86.13 E-value=1.5 Score=46.06 Aligned_cols=68 Identities=18% Similarity=0.085 Sum_probs=38.7
Q ss_pred EEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHH--hhcCCceEE
Q 006938 214 AFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEP--VASRVAYHV 291 (625)
Q Consensus 214 f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~--~~~~iP~~~ 291 (625)
+.++||.|.. ...+..+++.+. .+..+-++++||+++.+.... +-+..+.. +.....++.
T Consensus 54 ~~ViGDIHG~-------------~~~L~~l~~~~~--~~~~~~~lfLGDyVDRG~~s~---evl~ll~~lk~~~p~~v~l 115 (294)
T PTZ00244 54 VRVCGDTHGQ-------------YYDLLRIFEKCG--FPPYSNYLFLGDYVDRGKHSV---ETITLQFCYKIVYPENFFL 115 (294)
T ss_pred ceeeccCCCC-------------HHHHHHHHHHcC--CCCcccEEEeeeEecCCCCHH---HHHHHHHHHhhccCCeEEE
Confidence 6789999865 223444444331 123346778999998654322 11111111 122345889
Q ss_pred ccCCCCCC
Q 006938 292 CIGNHEYD 299 (625)
Q Consensus 292 v~GNHD~~ 299 (625)
+.||||..
T Consensus 116 lrGNHE~~ 123 (294)
T PTZ00244 116 LRGNHECA 123 (294)
T ss_pred EecccchH
Confidence 99999974
No 127
>PTZ00480 serine/threonine-protein phosphatase; Provisional
Probab=85.89 E-value=1.8 Score=45.94 Aligned_cols=23 Identities=13% Similarity=0.147 Sum_probs=19.7
Q ss_pred HHHHHHHHHHcCceEEEEcCccC
Q 006938 420 LEHLEPLFVENNVTLALWGHVHR 442 (625)
Q Consensus 420 ~~~l~~l~~ky~VdlvlsGH~H~ 442 (625)
.+.+...+++++.++++=||.-.
T Consensus 231 ~~~~~~Fl~~n~l~~IiR~Hq~v 253 (320)
T PTZ00480 231 QEIVQVFLKKHELDLICRAHQVV 253 (320)
T ss_pred HHHHHHHHHhCCCcEEEEcCccc
Confidence 46778889999999999999855
No 128
>cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain. Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most
Probab=85.72 E-value=2.9 Score=44.36 Aligned_cols=21 Identities=14% Similarity=0.376 Sum_probs=18.4
Q ss_pred HHHHHHHHHHcCceEEEEcCc
Q 006938 420 LEHLEPLFVENNVTLALWGHV 440 (625)
Q Consensus 420 ~~~l~~l~~ky~VdlvlsGH~ 440 (625)
.+++...++++++++++=||.
T Consensus 242 ~~~~~~Fl~~n~l~~iiRgHe 262 (311)
T cd07419 242 PDRVHRFLEENDLQMIIRAHE 262 (311)
T ss_pred HHHHHHHHHHCCCeEEEEech
Confidence 457788999999999999998
No 129
>cd00063 FN3 Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.
Probab=84.75 E-value=7.6 Score=30.90 Aligned_cols=22 Identities=27% Similarity=0.455 Sum_probs=18.7
Q ss_pred EEEEEEcCCCCCcEEEEEEecC
Q 006938 171 IFDAVIKGLKKGVRYYYKVGSD 192 (625)
Q Consensus 171 ~h~a~ltgL~PgT~Y~YrV~~~ 192 (625)
...+.+.+|.|++.|.++|..-
T Consensus 56 ~~~~~i~~l~p~~~Y~~~v~a~ 77 (93)
T cd00063 56 ETSYTLTGLKPGTEYEFRVRAV 77 (93)
T ss_pred ccEEEEccccCCCEEEEEEEEE
Confidence 3577789999999999999763
No 130
>PF09587 PGA_cap: Bacterial capsule synthesis protein PGA_cap; InterPro: IPR019079 CapA is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein [].
Probab=82.50 E-value=3.8 Score=41.80 Aligned_cols=64 Identities=19% Similarity=0.236 Sum_probs=42.8
Q ss_pred HHHHHHHHhhccccCCCCeEEEEcccCCccCCCCCCChhhhHHHHHHHHHHHHHcCceEEEEcCccCceeee
Q 006938 376 QYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVENNVTLALWGHVHRYERFC 447 (625)
Q Consensus 376 Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~~~d~~~~~~~~~~l~~l~~ky~VdlvlsGH~H~yeR~~ 447 (625)
+.+.+++++++++ ++.+++||..|.-.-.. ... .+. .+.+...+.+.++|+|+.+|.|..+-..
T Consensus 169 ~~~~i~~~i~~~r-~~~D~vIv~~HwG~e~~-----~~p-~~~-q~~~a~~lidaGaDiIiG~HpHv~q~~E 232 (250)
T PF09587_consen 169 GIERIKEDIREAR-KKADVVIVSLHWGIEYE-----NYP-TPE-QRELARALIDAGADIIIGHHPHVIQPVE 232 (250)
T ss_pred hHHHHHHHHHHHh-cCCCEEEEEeccCCCCC-----CCC-CHH-HHHHHHHHHHcCCCEEEeCCCCcccceE
Confidence 4578888888876 67889999999742111 111 122 2344445555899999999999977554
No 131
>smart00854 PGA_cap Bacterial capsule synthesis protein PGA_cap. This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein.
Probab=82.18 E-value=3.1 Score=42.08 Aligned_cols=60 Identities=17% Similarity=0.202 Sum_probs=35.9
Q ss_pred HHHHhhccccCCCCeEEEEcccCCccCCCCCCChhhhHHHHHHHHHHHHHcCceEEEEcCccCceeee
Q 006938 380 IKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVENNVTLALWGHVHRYERFC 447 (625)
Q Consensus 380 L~~~L~~~~r~~~~wiIV~~H~P~y~~~~~~~d~~~~~~~~~~l~~l~~ky~VdlvlsGH~H~yeR~~ 447 (625)
+++++++++ .+.+++||..|-..-.... . ... .+.+..-+.+.+||+++.||.|..+-..
T Consensus 162 i~~~i~~lr-~~~D~vIv~~H~G~e~~~~---p---~~~-~~~~A~~l~~~G~DvIiG~H~H~~~~~e 221 (239)
T smart00854 162 ILADIARAR-KKADVVIVSLHWGVEYQYE---P---TDE-QRELAHALIDAGADVVIGHHPHVLQPIE 221 (239)
T ss_pred HHHHHHHHh-ccCCEEEEEecCccccCCC---C---CHH-HHHHHHHHHHcCCCEEEcCCCCcCCceE
Confidence 444454443 3578899999976522111 0 111 1233334444789999999999877543
No 132
>smart00060 FN3 Fibronectin type 3 domain. One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins.
Probab=81.40 E-value=10 Score=29.06 Aligned_cols=22 Identities=27% Similarity=0.469 Sum_probs=19.0
Q ss_pred EEEEEEcCCCCCcEEEEEEecC
Q 006938 171 IFDAVIKGLKKGVRYYYKVGSD 192 (625)
Q Consensus 171 ~h~a~ltgL~PgT~Y~YrV~~~ 192 (625)
.+...+.+|+|++.|.++|..-
T Consensus 56 ~~~~~i~~L~~~~~Y~v~v~a~ 77 (83)
T smart00060 56 STSYTLTGLKPGTEYEFRVRAV 77 (83)
T ss_pred ccEEEEeCcCCCCEEEEEEEEE
Confidence 4678899999999999999763
No 133
>KOG4221 consensus Receptor mediating netrin-dependent axon guidance [Signal transduction mechanisms]
Probab=81.10 E-value=4.7 Score=49.04 Aligned_cols=122 Identities=17% Similarity=0.176 Sum_probs=69.7
Q ss_pred CcCCcccCCccCCCCCC--CCCCCCCCeeeeee--eeeeCC-C-CCceeEEEEecCCCCceEEEEEecCCC-------ce
Q 006938 61 LPLGRLRNQPQEARPRS--QPSPRHGPLVGQCR--VCRVRD-G-TGPRAGALGFTEDASEMRVMFLAEDGE-------KR 127 (625)
Q Consensus 61 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~--~~~~~~-~-~~P~qv~L~~~~~~~~~~V~W~T~~~~-------~~ 127 (625)
+.|++|+.. --|.. -.-.+.|..+.+.+ +.++.+ + ..|+.|.|.... +++++|.|.+...+ .-
T Consensus 576 ~ti~gL~k~---TeY~~~vvA~N~~G~g~sS~~i~V~Tlsd~PsaPP~Nl~lev~s-StsVrVsW~pP~~~t~ng~itgY 651 (1381)
T KOG4221|consen 576 YTINGLEKY---TEYSIRVVAYNSAGSGVSSADITVRTLSDVPSAPPQNLSLEVVS-STSVRVSWLPPPSETQNGQITGY 651 (1381)
T ss_pred EEeecCCCc---cceEEEEEEecCCCCCCCCCceEEEeccCCCCCCCcceEEEecC-CCeEEEEccCCCcccccceEEEE
Confidence 888888877 11111 11223355554444 445543 3 334448887764 69999999876532 13
Q ss_pred EEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEEEEEcCCCCCcEEEEEEecC----CCCcceeEEEE
Q 006938 128 YVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFDAVIKGLKKGVRYYYKVGSD----SKGWSETHSFV 203 (625)
Q Consensus 128 ~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~a~ltgL~PgT~Y~YrV~~~----~~~~S~~~~F~ 203 (625)
.++|+..+..... ..++. .+....=.+++|+|+|.|.+||..- .+..|++.++.
T Consensus 652 kIRy~~~~~~~~~-----~~t~v-----------------~~n~~~~l~~~Lep~T~Y~vrIsa~t~nGtGpaS~w~~ae 709 (1381)
T KOG4221|consen 652 KIRYRKLSREDEV-----NETVV-----------------KGNTTQYLFNGLEPNTQYRVRISAMTVNGTGPASEWVSAE 709 (1381)
T ss_pred EEEecccCccccc-----ceeec-----------------ccchhhhHhhcCCCCceEEEEEEEeccCCCCCcccceecc
Confidence 4566644432110 01111 1111122367899999999999853 24678899999
Q ss_pred cCCCC
Q 006938 204 SRNED 208 (625)
Q Consensus 204 T~p~~ 208 (625)
|+-.+
T Consensus 710 T~~~d 714 (1381)
T KOG4221|consen 710 TPESD 714 (1381)
T ss_pred Ccccc
Confidence 97543
No 134
>PRK10884 SH3 domain-containing protein; Provisional
Probab=72.69 E-value=1.3 Score=43.99 Aligned_cols=39 Identities=18% Similarity=0.530 Sum_probs=31.4
Q ss_pred eeeeeeeeEEeccchhhhHHHHHHhhheeeeccccccCCCCc
Q 006938 575 LTKSTFSWFVQGASILVLGAFVGYVIGYISHTKKAATSGRSW 616 (625)
Q Consensus 575 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 616 (625)
.+.....|+..|++|+.+|++||-+|-.+..+||+ +.+|
T Consensus 166 ~~~~~~~wf~~Gg~v~~~GlllGlilp~l~prRkr---~~~W 204 (206)
T PRK10884 166 QRTIIMQWFMYGGGVAGIGLLLGLLLPHLIPRRKR---KDRW 204 (206)
T ss_pred HHHHHHHHHHHchHHHHHHHHHHHHhccccccccc---cccc
Confidence 34456689999999999999999999988766665 3457
No 135
>PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast. In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G.
Probab=72.47 E-value=3.7 Score=40.42 Aligned_cols=78 Identities=12% Similarity=0.142 Sum_probs=39.8
Q ss_pred EEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchh---------hH-HHHHHh----
Q 006938 214 AFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSW---------LW-DEFFAL---- 279 (625)
Q Consensus 214 f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~---------~w-d~f~~~---- 279 (625)
+++++|...... ....+.++.+++.++ ...+|+.+|++|+++....... .. ..+.+.
T Consensus 1 Iv~~Sg~~~~~~--------~~~~~~L~~~l~~~~-~~~~p~~lIl~G~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (209)
T PF04042_consen 1 IVFASGPFLDSD--------NLSLEPLRDLLSGVE-DASKPDVLILMGPFIDSPHPYISSGSVPDSYSFEEDFLKELDSF 71 (209)
T ss_dssp EEEEES--CTTT---------HHHHHHHHHHHCCC-HCTTECEEEEES-SCBTTSHHHHHT---HHCCHHHHHHHHCHHH
T ss_pred CEEEecCccCCC--------HhHHHHHHHHHHhcc-ccCCCcEEEEeCCCcCccccccccccccccccccHHHHHHHHHH
Confidence 456777766532 122334444443322 1468999999999987543211 11 112222
Q ss_pred HHHhhcCCceEEccCCCCCCC
Q 006938 280 IEPVASRVAYHVCIGNHEYDW 300 (625)
Q Consensus 280 l~~~~~~iP~~~v~GNHD~~~ 300 (625)
+..+...++++.+||+||...
T Consensus 72 ~~~i~~~~~vvlvPg~~D~~~ 92 (209)
T PF04042_consen 72 LESILPSTQVVLVPGPNDPTS 92 (209)
T ss_dssp HCCCHCCSEEEEE--TTCTT-
T ss_pred HhhcccccEEEEeCCCccccc
Confidence 233456789999999999863
No 136
>KOG3947 consensus Phosphoesterases [General function prediction only]
Probab=66.71 E-value=10 Score=39.03 Aligned_cols=66 Identities=18% Similarity=0.056 Sum_probs=41.2
Q ss_pred CcceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhcCCce
Q 006938 210 NETIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASRVAY 289 (625)
Q Consensus 210 ~~~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~~iP~ 289 (625)
.-.+|+.++|.|.-... ++. -+.-|+++++||...-+- .++-..|-+ ...+.|+
T Consensus 60 ~~~r~VcisdtH~~~~~--------------------i~~-~p~gDvlihagdfT~~g~-~~ev~~fn~----~~gslph 113 (305)
T KOG3947|consen 60 GYARFVCISDTHELTFD--------------------IND-IPDGDVLIHAGDFTNLGL-PEEVIKFNE----WLGSLPH 113 (305)
T ss_pred CceEEEEecCcccccCc--------------------ccc-CCCCceEEeccCCccccC-HHHHHhhhH----HhccCcc
Confidence 44789999999876431 111 145699999999976432 222222322 3344553
Q ss_pred ---EEccCCCCCCCC
Q 006938 290 ---HVCIGNHEYDWP 301 (625)
Q Consensus 290 ---~~v~GNHD~~~~ 301 (625)
+++.||||...+
T Consensus 114 ~yKIVIaGNHELtFd 128 (305)
T KOG3947|consen 114 EYKIVIAGNHELTFD 128 (305)
T ss_pred eeeEEEeeccceeec
Confidence 678999998643
No 137
>PTZ00235 DNA polymerase epsilon subunit B; Provisional
Probab=61.75 E-value=50 Score=34.59 Aligned_cols=80 Identities=9% Similarity=0.059 Sum_probs=50.0
Q ss_pred cceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHh---CCCCcEEEEcCccccCC-----CchhhHHHHHHhHHH
Q 006938 211 ETIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEAL---GDKPAFVSHIGDISYAR-----GYSWLWDEFFALIEP 282 (625)
Q Consensus 211 ~~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~---~~~pdfvl~~GDivy~~-----g~~~~wd~f~~~l~~ 282 (625)
..+|+++||..... ....+.++.+.+..+.. ...|-.+|+.|+.+... .....+.+.|+.+..
T Consensus 27 ~~~~VilSDV~LD~---------p~tl~~L~kvf~~y~~~~~~~~~P~~fVL~GnF~S~p~~~~~~~~~~yk~~Fd~La~ 97 (291)
T PTZ00235 27 RHNWIIMHDVYLDS---------PYTFEVLDKMLSLYVNTYPENELPVGFIFMGDFISLKFDYNRNFHKVYIKGFEKLSV 97 (291)
T ss_pred ceEEEEEEeeccCC---------HHHHHHHHHHHHHhhccCcccCCCeEEEEecCccCCcccCCCCchHHHHHHHHHHHH
Confidence 46788899998864 33445555555544321 13488999999986542 122334454554433
Q ss_pred --------hhcCCceEEccCCCCCC
Q 006938 283 --------VASRVAYHVCIGNHEYD 299 (625)
Q Consensus 283 --------~~~~iP~~~v~GNHD~~ 299 (625)
+..+.-++.|||-.|-.
T Consensus 98 llls~fp~L~~~s~fVFVPGpnDPw 122 (291)
T PTZ00235 98 MLISKFKLILEHCYLIFIPGINDPC 122 (291)
T ss_pred HHHHhChHHHhcCeEEEECCCCCCC
Confidence 34566799999999963
No 138
>PF10179 DUF2369: Uncharacterised conserved protein (DUF2369); InterPro: IPR019326 This is a proline-rich region of a group of proteins found from plants to fungi. The function is largely unknown, although the entry contains Fibronectin type-III domain-containing protein C4orf31, which promotes matrix assembly and cell adhesiveness.
Probab=49.18 E-value=93 Score=32.83 Aligned_cols=92 Identities=15% Similarity=0.251 Sum_probs=49.6
Q ss_pred CCCCceeEEEEecCC--C-CceEEEEEecCCCc-eEEEEEcc-CCCCCcEEEeeEEEEeeccccCCCCCCccc----c--
Q 006938 97 DGTGPRAGALGFTED--A-SEMRVMFLAEDGEK-RYVKYGEK-KDQMGHVAVASVERYERGQMCDKPANSSIG----W-- 165 (625)
Q Consensus 97 ~~~~P~qv~L~~~~~--~-~~~~V~W~T~~~~~-~~V~yg~~-~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g----~-- 165 (625)
-+.-|+-..+-..+. . ++++|.|....... .++-|-.. .+.... . ......++|..|...... -
T Consensus 171 ~P~LP~d~~Ik~f~~lrtC~SvTIAW~~s~d~~~kYCvy~~~~~~~~~~---~--~~~~~~n~C~~~~sr~k~e~v~Ck~ 245 (300)
T PF10179_consen 171 YPQLPDDTSIKEFNKLRTCNSVTIAWLGSPDRSIKYCVYRREEHSNYQE---R--SVSRMPNQCLGPESRKKSEKVLCKY 245 (300)
T ss_pred CCCCCCCCceeEEcCCcccceEEEEEecCCCCCceEEEEEEEecCchhh---h--hhcccCccCCCCCccccceEEEEEE
Confidence 456688888766652 3 89999998544333 34444332 221100 0 011234556644322111 0
Q ss_pred -c-------CCceEEEEEEcCCCCCcEEEEEEecCC
Q 006938 166 -R-------DPGWIFDAVIKGLKKGVRYYYKVGSDS 193 (625)
Q Consensus 166 -~-------~~~~~h~a~ltgL~PgT~Y~YrV~~~~ 193 (625)
+ .+.-+-..+|.||+||+.|-..|....
T Consensus 246 ~~~~n~~~~~~~~v~tetI~~L~PG~~Yl~dV~~~~ 281 (300)
T PF10179_consen 246 FHSPNSSEDPQRAVTTETIKGLKPGTTYLFDVYVNG 281 (300)
T ss_pred EcCCccccccccccceeecccCCCCcEEEEEEEEec
Confidence 1 111223447999999999999988753
No 139
>PRK10301 hypothetical protein; Provisional
Probab=43.71 E-value=1.7e+02 Score=26.64 Aligned_cols=34 Identities=18% Similarity=0.063 Sum_probs=23.0
Q ss_pred eEEEEEEc-CCCCCc-EEEEEEecCCC-CcceeEEEE
Q 006938 170 WIFDAVIK-GLKKGV-RYYYKVGSDSK-GWSETHSFV 203 (625)
Q Consensus 170 ~~h~a~lt-gL~PgT-~Y~YrV~~~~~-~~S~~~~F~ 203 (625)
....+.+. .|.||+ +..||+.+.++ ..+..|+|+
T Consensus 86 ~~~~v~l~~~L~~G~YtV~Wrvvs~DGH~~~G~~~F~ 122 (124)
T PRK10301 86 KQLIVPLADSLKPGTYTVDWHVVSVDGHKTKGHYTFS 122 (124)
T ss_pred cEEEEECCCCCCCccEEEEEEEEecCCCccCCeEEEE
Confidence 44577774 699996 66788887653 455667774
No 140
>PTZ00382 Variant-specific surface protein (VSP); Provisional
Probab=39.88 E-value=22 Score=30.86 Aligned_cols=24 Identities=25% Similarity=0.432 Sum_probs=18.7
Q ss_pred eccchhhhHHHHHHhhheeeeccc
Q 006938 585 QGASILVLGAFVGYVIGYISHTKK 608 (625)
Q Consensus 585 ~~~~~~~~~~~~~~~~~~~~~~~~ 608 (625)
..++++++|++.|+++.|+++|||
T Consensus 72 ~vg~~~~v~~lv~~l~w~f~~r~k 95 (96)
T PTZ00382 72 SVAVVAVVGGLVGFLCWWFVCRGK 95 (96)
T ss_pred EeehhhHHHHHHHHHhheeEEeec
Confidence 345667888889999988888776
No 141
>KOG4221 consensus Receptor mediating netrin-dependent axon guidance [Signal transduction mechanisms]
Probab=38.58 E-value=1.9e+02 Score=36.08 Aligned_cols=36 Identities=19% Similarity=0.122 Sum_probs=28.3
Q ss_pred EEEEEEcCCCCCcEEEEEEecCC----CCcceeEEEEcCC
Q 006938 171 IFDAVIKGLKKGVRYYYKVGSDS----KGWSETHSFVSRN 206 (625)
Q Consensus 171 ~h~a~ltgL~PgT~Y~YrV~~~~----~~~S~~~~F~T~p 206 (625)
.++.+|+||+|.|.|.|||...+ +.-|..-+|+|+.
T Consensus 573 ~~e~ti~gL~k~TeY~~~vvA~N~~G~g~sS~~i~V~Tls 612 (1381)
T KOG4221|consen 573 ATEYTINGLEKYTEYSIRVVAYNSAGSGVSSADITVRTLS 612 (1381)
T ss_pred ccEEEeecCCCccceEEEEEEecCCCCCCCCCceEEEecc
Confidence 36778999999999999999753 2346777888864
No 142
>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d
Probab=37.90 E-value=31 Score=32.73 Aligned_cols=17 Identities=24% Similarity=0.351 Sum_probs=13.9
Q ss_pred cCceEEEEcCccCceee
Q 006938 430 NNVTLALWGHVHRYERF 446 (625)
Q Consensus 430 y~VdlvlsGH~H~yeR~ 446 (625)
.+.+++++||+|.....
T Consensus 124 ~~~d~vi~GHtH~~~~~ 140 (168)
T cd07390 124 DRGSWNLHGHIHSNSPD 140 (168)
T ss_pred CCCeEEEEeeeCCCCCC
Confidence 46789999999997654
No 143
>KOG3513 consensus Neural cell adhesion molecule L1 [Signal transduction mechanisms]
Probab=37.81 E-value=1.3e+02 Score=36.95 Aligned_cols=22 Identities=18% Similarity=0.250 Sum_probs=19.1
Q ss_pred eEEEEEEcCCCCCcEEEEEEec
Q 006938 170 WIFDAVIKGLKKGVRYYYKVGS 191 (625)
Q Consensus 170 ~~h~a~ltgL~PgT~Y~YrV~~ 191 (625)
-.-.+.|+||+|+|.|+..|..
T Consensus 875 ~~~~~~ltgL~~~T~Y~~~vrA 896 (1051)
T KOG3513|consen 875 NRTSWRLTGLEPNTKYRFYVRA 896 (1051)
T ss_pred CcceEeeeCCCCCceEEEEEEE
Confidence 3457789999999999999986
No 144
>KOG4258 consensus Insulin/growth factor receptor (contains protein kinase domain) [Signal transduction mechanisms]
Probab=36.25 E-value=1.2e+02 Score=36.16 Aligned_cols=114 Identities=12% Similarity=0.003 Sum_probs=65.6
Q ss_pred CCceeEEEEecCC-CCceEEEEEecCCC------ceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCc------ccc
Q 006938 99 TGPRAGALGFTED-ASEMRVMFLAEDGE------KRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSS------IGW 165 (625)
Q Consensus 99 ~~P~qv~L~~~~~-~~~~~V~W~T~~~~------~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~------~g~ 165 (625)
-++.-++++.+.. .+++.+.|..-.+. .-.+.|.+.+.. ..+-|...+.|+.-.=.- -+-
T Consensus 487 Ce~~~l~~~~~~~~~dsi~lrW~~~~~~d~r~llg~~~~yKEaP~q-------NvT~~dg~~aCg~~~W~~~~v~~~~~~ 559 (1025)
T KOG4258|consen 487 CEDLVLQFSSTVTSADSILLRWERYQPPDMRDLLGFLLHYKEAPFQ-------NVTEEDGRDACGSNSWNVVDVDPPDLI 559 (1025)
T ss_pred cccceeeeeeEEeecceeEEEecccCCcchhhhheeeEeeccCCcc-------ccceecCccccccCcceEEeccCCcCC
Confidence 3466677777754 59999999866532 245777777621 112233334443210000 000
Q ss_pred cCCceEEEEEEcCCCCCcEEEEEEecCC--------CCcceeEEEEcCCCCCC-cceEEEEEe
Q 006938 166 RDPGWIFDAVIKGLKKGVRYYYKVGSDS--------KGWSETHSFVSRNEDSN-ETIAFLFGD 219 (625)
Q Consensus 166 ~~~~~~h~a~ltgL~PgT~Y~YrV~~~~--------~~~S~~~~F~T~p~~~~-~~~f~v~GD 219 (625)
-..+......|.||+|.|.|-|-|..-. ...|++..++|.|..++ ++..+.-.+
T Consensus 560 p~~~~~~~~~l~~LkP~TqYAvfVkT~t~t~~~~~~~A~S~I~YvqT~~~~PspPl~~ls~sn 622 (1025)
T KOG4258|consen 560 PNDGTHPGFLLDGLKPWTQYAVFVKTLTVTEAHEAYEAKSKIGYVQTLPDIPSPPLDVLSKSN 622 (1025)
T ss_pred CccccccceehhcCCccceeEEEEeeeehhhhccccccccceEEEEecCCCCCCcchhhhccC
Confidence 0011223677999999999999988631 25789999999876554 344444333
No 145
>KOG2476 consensus Uncharacterized conserved protein [Function unknown]
Probab=35.11 E-value=95 Score=34.48 Aligned_cols=70 Identities=9% Similarity=0.017 Sum_probs=41.5
Q ss_pred ceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhcCCceEE
Q 006938 212 TIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASRVAYHV 291 (625)
Q Consensus 212 ~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~~iP~~~ 291 (625)
.++++.||.-.. ..+.++.+ +++++.....|+++.+|++.-.+....+|..+.+-.. .-.+|.|.
T Consensus 6 ~kILv~Gd~~Gr------------~~eli~rI-~~v~Kk~GpFd~liCvGnfF~~~~~~~e~~~ykng~~--~vPiptY~ 70 (528)
T KOG2476|consen 6 AKILVCGDVEGR------------FDELIKRI-QKVNKKSGPFDLLICVGNFFGHDTQNAEVEKYKNGTK--KVPIPTYF 70 (528)
T ss_pred ceEEEEcCcccc------------HHHHHHHH-HHHhhcCCCceEEEEecccCCCccchhHHHHHhcCCc--cCceeEEE
Confidence 689999997443 12223322 2233334557999999999765555555555543332 23577777
Q ss_pred ccCCC
Q 006938 292 CIGNH 296 (625)
Q Consensus 292 v~GNH 296 (625)
.-+|-
T Consensus 71 ~g~~~ 75 (528)
T KOG2476|consen 71 LGDNA 75 (528)
T ss_pred ecCCC
Confidence 66654
No 146
>TIGR02855 spore_yabG sporulation peptidase YabG. Members of this family are the protein YabG, demonstrated for Bacillus subtilis to be an endopeptidase able to release N-terminal peptides from a number of sporulation proteins, including CotT, CotF, and SpoIVA. It appears to be expressed under control of sigma-K.
Probab=28.75 E-value=42 Score=34.73 Aligned_cols=50 Identities=24% Similarity=0.286 Sum_probs=32.3
Q ss_pred HHHHHHhhccccCCCCeEEEEcccCCccCCCCCCChhhhHHHHHHHHHHHHHcCce-EEEEcCccC
Q 006938 378 NFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVENNVT-LALWGHVHR 442 (625)
Q Consensus 378 ~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~~~d~~~~~~~~~~l~~l~~ky~Vd-lvlsGH~H~ 442 (625)
++|+.-|+.-++-..| ++-.|.| ..++-+.+.+|+++|+.| |||+||+-.
T Consensus 115 ~YL~~Cl~~Ykql~i~--a~G~~~~-------------E~eqp~~i~~Ll~~~~PDIlViTGHD~~ 165 (283)
T TIGR02855 115 EYLRKCLKLYKKIGVP--VVGIHCK-------------EKEMPEKVLDLIEEVRPDILVITGHDAY 165 (283)
T ss_pred HHHHHHHHHHHHhCCc--eEEEEec-------------chhchHHHHHHHHHhCCCEEEEeCchhh
Confidence 4577777765433333 2223321 134457888999999999 679999964
No 147
>PF05582 Peptidase_U57: YabG peptidase U57; InterPro: IPR008764 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. The peptidases families associated with clan U- have an unknown catalytic mechanism as the protein fold of the active site domain and the active site residues have not been reported. This is a group of peptidases belong to MEROPS peptidase family U57 (clan U-). The type example is the YabG protein of Bacillus subtilis. This is a protease involved in the synthesis and maturation of the spore coat proteins SpoIVA and YrbA of B. subtilis [].
Probab=28.02 E-value=53 Score=34.15 Aligned_cols=26 Identities=23% Similarity=0.207 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHHcCce-EEEEcCccC
Q 006938 417 NRMLEHLEPLFVENNVT-LALWGHVHR 442 (625)
Q Consensus 417 ~~~~~~l~~l~~ky~Vd-lvlsGH~H~ 442 (625)
.++-+.+..|+.+++.| |||+||+=.
T Consensus 140 ~eqp~~i~~Ll~~~~PDIlViTGHD~~ 166 (287)
T PF05582_consen 140 KEQPEKIYRLLEEYRPDILVITGHDGY 166 (287)
T ss_pred HHhhHHHHHHHHHcCCCEEEEeCchhh
Confidence 44567889999999999 679999975
No 148
>smart00467 GS GS motif. Aa approx. 30 amino acid motif that precedes the kinase domain in types I and II TGF beta receptors. Mutation of two or more of the serines or threonines in the TTSGSGSG of TGF-beta type I receptor impairs phosphorylation and signaling activity.
Probab=26.61 E-value=30 Score=23.46 Aligned_cols=8 Identities=100% Similarity=1.307 Sum_probs=6.1
Q ss_pred ccCCCCCC
Q 006938 559 TTSGSGSG 566 (625)
Q Consensus 559 ~~~~~~~~ 566 (625)
.|||||+|
T Consensus 10 ~tSGSGSG 17 (30)
T smart00467 10 TTSGSGSG 17 (30)
T ss_pred ccCCCCCC
Confidence 47888887
No 149
>PF08515 TGF_beta_GS: Transforming growth factor beta type I GS-motif; InterPro: IPR003605 Transforming growth factor beta (TGF-beta) is a member of a large family of secreted growth factors of central importance in eukaryotic development and homeostasis. Members of this family, which includes the activins, inhibins and bone morphogenic proteins (BMPs), bind to receptors that consist of two transmembrane serine/threonine (Ser/Thr) kinases called the type I and type II receptors. Type II activates Type I upon formation of the ligand receptor complex by multiply phosphorylating the GS domain, a short (~30 residues), highly conserved regulatory sequence just N-terminal to the kinase domain on the cytoplasmic side of the receptor. The GS domain is found only in the type I receptor family and is named for the TTSGSGSG sequence at its core. At least three, and perhaps four to five of the serines and threonines in the GS domain, must be phosphorylated to fully activate TbetaR-1 []. The GS domain forms a helix-loop-helix structure in which the sites of activating phosphorylation are situated in a loop known as the GS loop. One key role for phosphorylation is to block the adoption of an inactivating configuration by the GS domain [].; GO: 0004675 transmembrane receptor protein serine/threonine kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation, 0016020 membrane; PDB: 3MY0_H 3Q4U_B 3H9R_A 3MTF_B 3OOM_A 3KCF_C 3FAA_A 1IAS_A 1PY5_A 2X7O_C ....
Probab=26.43 E-value=28 Score=23.36 Aligned_cols=8 Identities=88% Similarity=1.265 Sum_probs=6.2
Q ss_pred ccCCCCCC
Q 006938 559 TTSGSGSG 566 (625)
Q Consensus 559 ~~~~~~~~ 566 (625)
++||||+|
T Consensus 11 ~tSGSGSG 18 (29)
T PF08515_consen 11 STSGSGSG 18 (29)
T ss_dssp HCCTSSSS
T ss_pred ccCCCCCC
Confidence 67888877
No 150
>cd02856 Glycogen_debranching_enzyme_N_term Glycogen_debranching_enzyme N-terminal domain. Glycogen debranching enzymes have both 4-alpha-glucanotransferase and amylo-1,6-glucosidase activities. As a transferase it transfers a segment of a 1,4-alpha-D-glucan to a new 4-position in an acceptor, which may be glucose or another 1,4-alpha-D-glucan. As a glucosidase it catalyzes the endohydrolysis of 1,6-alpha-D-glucoside linkages at points of branching in chains of 1,4-linked alpha-D-glucose residues. The N-terminus of the glycogen debranching enzyme may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase.
Probab=25.77 E-value=94 Score=26.88 Aligned_cols=23 Identities=30% Similarity=0.703 Sum_probs=20.0
Q ss_pred ceEEEEEEcCCCCCcEEEEEEec
Q 006938 169 GWIFDAVIKGLKKGVRYYYKVGS 191 (625)
Q Consensus 169 ~~~h~a~ltgL~PgT~Y~YrV~~ 191 (625)
+-++++.+.++.+|+.|.|||..
T Consensus 44 ~GvW~~~v~~~~~g~~Y~y~i~g 66 (103)
T cd02856 44 GGVWHGFLPGIKAGQRYGFRVHG 66 (103)
T ss_pred CCEEEEEECCCCCCCEEEEEECC
Confidence 45788999999999999999964
No 151
>cd02852 Isoamylase_N_term Isoamylase N-terminus domain. Isoamylase (aka glycogen 6-glucanohydrolase) is one of the starch-debranching enzymes that catalyzes the hydrolysis of alpha-1,6-glucosidic linkages specific in alpha-glucans such as amylopectin or glycogen. Isoamylase contains a bound calcium ion, but this is not in the same position as the conserved calcium ion that has been reported in other alpha-amylase family enzymes. The N-terminus of isoamylase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase.
Probab=24.30 E-value=96 Score=27.55 Aligned_cols=23 Identities=35% Similarity=0.686 Sum_probs=20.4
Q ss_pred ceEEEEEEcCCCCCcEEEEEEec
Q 006938 169 GWIFDAVIKGLKKGVRYYYKVGS 191 (625)
Q Consensus 169 ~~~h~a~ltgL~PgT~Y~YrV~~ 191 (625)
+-++++.+.++.+|+.|.|||..
T Consensus 48 ~gvW~~~v~~~~~g~~Y~y~v~g 70 (119)
T cd02852 48 GDVWHVFVEGLKPGQLYGYRVDG 70 (119)
T ss_pred CCEEEEEECCCCCCCEEEEEECC
Confidence 45788999999999999999974
No 152
>cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain. PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all
Probab=22.12 E-value=81 Score=30.93 Aligned_cols=31 Identities=16% Similarity=0.056 Sum_probs=20.8
Q ss_pred CceEEEEcCccCceeeeccCCccccCCCCCCCCCCCCcEEEEECCCCC
Q 006938 431 NVTLALWGHVHRYERFCPLNNFTCGSMGMDGEPSEAFPVHIVIGMAGQ 478 (625)
Q Consensus 431 ~VdlvlsGH~H~yeR~~p~~~~~~~~~~~~~~~~~~g~vyIv~G~gG~ 478 (625)
+.+++++||+|...... .++.+.|-.|+.|.
T Consensus 168 ~~~~iV~GHTh~~~~~~-----------------~~~~i~ID~Gsv~g 198 (207)
T cd07424 168 GVDAVVHGHTPVKRPLR-----------------LGNVLYIDTGAVFD 198 (207)
T ss_pred CCCEEEECCCCCCcceE-----------------ECCEEEEECCCCCC
Confidence 45889999999864221 14457777777654
No 153
>KOG0374 consensus Serine/threonine specific protein phosphatase PP1, catalytic subunit [Signal transduction mechanisms; General function prediction only]
Probab=21.87 E-value=1.4e+02 Score=32.08 Aligned_cols=23 Identities=13% Similarity=0.096 Sum_probs=18.4
Q ss_pred HHHHHHHHHHcCceEEEEcCccC
Q 006938 420 LEHLEPLFVENNVTLALWGHVHR 442 (625)
Q Consensus 420 ~~~l~~l~~ky~VdlvlsGH~H~ 442 (625)
.+.+.+++.+.++|+++-+|.=.
T Consensus 233 ~~~v~~f~~~~~ldlivRaHqvv 255 (331)
T KOG0374|consen 233 PAVVEDFCKKLDLDLIVRAHQVV 255 (331)
T ss_pred HHHHHHHHHHhCcceEEEcCccc
Confidence 35677789999999999999643
No 154
>cd02853 MTHase_N_term Maltooligosyl trehalose synthase (MTSase) N-terminus domain. MTSase and maltooligosyl trehalose trehalohydrolase (MTHase) work together to produce trehalose. MTSase is responsible for converting the alpha-1,4-glucosidic linkage to an alpha,alpha-1,1-glucosidic linkage at the reducing end of the maltooligosaccharide through an intramolecular transglucosylation reaction, while MTHase hydrolyzes the penultimate alpha-1,4 linkage of the reducing end, resulting in the release of trehalose. The N-terminus of MTSase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase.
Probab=21.87 E-value=1.2e+02 Score=25.17 Aligned_cols=20 Identities=35% Similarity=0.693 Sum_probs=17.9
Q ss_pred eEEEEEEcCCCCCcEEEEEEe
Q 006938 170 WIFDAVIKGLKKGVRYYYKVG 190 (625)
Q Consensus 170 ~~h~a~ltgL~PgT~Y~YrV~ 190 (625)
-++++.+.++ +|..|.|+|.
T Consensus 40 G~W~~~v~~~-~g~~Y~y~v~ 59 (85)
T cd02853 40 GWFEAEVPGA-AGTRYRYRLD 59 (85)
T ss_pred cEEEEEeCCC-CCCeEEEEEC
Confidence 4678899999 9999999997
No 155
>cd02860 Pullulanase_N_term Pullulanase domain N-terminus. Pullulanase (AKA dextrinase; alpha-dextrin endo-1,6-alpha glucosidase) is an enzyme with action similar to that of isoamylase; it cleaves 1,6-alpha-glucosidic linkages in pullulan, amylopectin, and glycogen, and in alpha-and beta-amylase limit-dextrins of amylopectin and glycogen. The N-terminus of pullulanase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase.
Probab=21.22 E-value=1.2e+02 Score=25.92 Aligned_cols=24 Identities=21% Similarity=0.386 Sum_probs=20.6
Q ss_pred ceEEEEEEcCCCCCcEEEEEEecC
Q 006938 169 GWIFDAVIKGLKKGVRYYYKVGSD 192 (625)
Q Consensus 169 ~~~h~a~ltgL~PgT~Y~YrV~~~ 192 (625)
+-++++.+.++.+|..|.|||...
T Consensus 46 ~gvw~~~v~~~~~g~~Y~y~i~~~ 69 (100)
T cd02860 46 NGVWSVTLDGDLEGYYYLYEVKVY 69 (100)
T ss_pred CCEEEEEeCCccCCcEEEEEEEEe
Confidence 457889999999999999999753
No 156
>PF03302 VSP: Giardia variant-specific surface protein; InterPro: IPR005127 During infection, the intestinal protozoan parasite Giardia lamblia virus undergoes continuous antigenic variation which is determined by diversification of the parasite's major surface antigen, named VSP (variant surface protein).
Probab=20.83 E-value=58 Score=35.77 Aligned_cols=25 Identities=28% Similarity=0.476 Sum_probs=20.9
Q ss_pred eccchhhhHHHHHHhhheeeecccc
Q 006938 585 QGASILVLGAFVGYVIGYISHTKKA 609 (625)
Q Consensus 585 ~~~~~~~~~~~~~~~~~~~~~~~~~ 609 (625)
..+.|+|+|.++||..-|++-|+|+
T Consensus 373 svavvvvVgglvGfLcWwf~crgka 397 (397)
T PF03302_consen 373 SVAVVVVVGGLVGFLCWWFICRGKA 397 (397)
T ss_pred eehhHHHHHHHHHHHhhheeecccC
Confidence 3567889999999999988888773
Done!