Your job contains 1 sequence.
>006939
MSGYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFS
WEPIRCHDAVDVGWSRLSDLNVHEGKLLGCSYNQSCVGVWVVDISRIEPYTIGSVTRVNG
LSESKSSASGNLSVLNENSAKASLGKLSVSQNSDPLVKETKSLGRLSVSQNSDPLLKETK
TLGRLSVSQNSEPAKESKVLSSTGSVPGTPQRVNLNMGSKTSVVNSTAVVSKRTSTRANT
ASNVPILNKSDIVPVIVPRTNTRFEQAVESRKDIDVIGRTMPFSLQSKATDSRKFQNSGD
EVDQPAVSVLCENTGSKATEVSSVADRNTFAAIKGSIQGVSVTERNSKEDIFTVSGKSGT
MSMSESPASYEDERYDSLGHKSNRDGYAMESQKRGRMHSLVINWEKRGSSPNYDGPTSSI
SSGTVSTVSMPPFNAFKQRGYSSSAEKETASVSDEDATADVMEQHSQFVSSMQSRLAKLQ
AVYRYWERNDVKGAISAMQKMADHTVLADVMSIVVEKIEIVTLDICSCLLPLLTGLLESD
MDRHLSISLDILLKLVRTFGSMIYSAISASTSVGVDIEAEQRIERCNRCFIELEKVKCCL
PTLMRRGGSVAKSAQELNLALQDVS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 006939
(625 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2154438 - symbol:AT5G23430 "AT5G23430" species... 1190 2.1e-126 2
TAIR|locus:2150788 - symbol:AT5G08390 "AT5G08390" species... 1179 2.4e-125 2
TAIR|locus:2202129 - symbol:AT1G11160 "AT1G11160" species... 421 2.1e-76 2
UNIPROTKB|Q5ZIU8 - symbol:KATNB1 "Katanin p80 WD40 repeat... 303 1.0e-37 2
MGI|MGI:1921437 - symbol:Katnb1 "katanin p80 (WD40-contai... 269 2.2e-35 2
RGD|1311256 - symbol:Katnb1 "katanin p80 (WD repeat conta... 268 2.8e-35 2
UNIPROTKB|E1BQV9 - symbol:KATNB1 "Katanin p80 WD40 repeat... 289 1.0e-34 2
UNIPROTKB|F1P0F4 - symbol:KATNB1 "Katanin p80 WD40 repeat... 289 1.0e-34 2
UNIPROTKB|E3W9A3 - symbol:KATNB1 "Katanin p80 WD40 repeat... 273 3.0e-34 2
UNIPROTKB|E2QTQ5 - symbol:KATNB1 "Uncharacterized protein... 264 3.4e-34 2
ZFIN|ZDB-GENE-040426-1954 - symbol:katnb1 "katanin p80 (W... 286 7.2e-22 1
UNIPROTKB|Q9BVA0 - symbol:KATNB1 "Katanin p80 WD40 repeat... 272 2.2e-20 1
UNIPROTKB|F1RF38 - symbol:KATNB1 "Uncharacterized protein... 267 4.3e-20 1
UNIPROTKB|A6QQU1 - symbol:KATNB1 "KATNB1 protein" species... 260 4.8e-19 1
UNIPROTKB|F6UQ08 - symbol:F6UQ08 "Uncharacterized protein... 184 3.5e-15 2
FB|FBgn0040207 - symbol:kat80 "katanin 80" species:7227 "... 146 4.8e-12 2
UNIPROTKB|J9P0X5 - symbol:KATNB1 "Uncharacterized protein... 166 2.1e-11 1
CGD|CAL0003874 - symbol:PGA55 species:5476 "Candida albic... 151 1.1e-06 1
UNIPROTKB|Q59SG9 - symbol:PGA55 "Flocculin-like protein" ... 151 1.1e-06 1
UNIPROTKB|H3BTU7 - symbol:KATNB1 "Katanin p80 WD40 repeat... 123 9.7e-05 1
UNIPROTKB|Q5RD06 - symbol:POC1B "POC1 centriolar protein ... 119 0.00017 2
POMBASE|SPBC215.13 - symbol:SPBC215.13 "sequence orphan" ... 124 0.00025 1
UNIPROTKB|G3V1X0 - symbol:POC1B "POC1 centriolar protein ... 120 0.00051 1
UNIPROTKB|F1P8S8 - symbol:POC1B "Uncharacterized protein"... 120 0.00059 1
UNIPROTKB|Q8TC44 - symbol:POC1B "POC1 centriolar protein ... 120 0.00059 1
RGD|2323942 - symbol:Poc1b "POC1 centriolar protein homol... 119 0.00075 1
>TAIR|locus:2154438 [details] [associations]
symbol:AT5G23430 "AT5G23430" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0005874
GO:GO:0080008 EMBL:AB018110 EMBL:BT002053 IPI:IPI00519668
IPI:IPI00532083 RefSeq:NP_197734.2 RefSeq:NP_851064.1
UniGene:At.45963 ProteinModelPortal:Q8H0T9 SMR:Q8H0T9 IntAct:Q8H0T9
PaxDb:Q8H0T9 PRIDE:Q8H0T9 EnsemblPlants:AT5G23430.1 GeneID:832409
KEGG:ath:AT5G23430 GeneFarm:2999 TAIR:At5g23430
HOGENOM:HOG000008039 InParanoid:Q8H0T9 OMA:DFKCHEG PhylomeDB:Q8H0T9
ProtClustDB:CLSN2717628 Genevestigator:Q8H0T9 GermOnline:AT5G23430
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 Uniprot:Q8H0T9
Length = 837
Score = 1190 (424.0 bits), Expect = 2.1e-126, Sum P(2) = 2.1e-126
Identities = 263/505 (52%), Positives = 335/505 (66%)
Query: 125 KSSASGNLSVLNENSAKASLGKLSVSQNSDPLVKETKSLGRLSVSQNSDPLLKETKTLGR 184
K S S N+ L + + SLG+LSVSQNSDP KETKS+GR S SQNS+ +KE+K LGR
Sbjct: 340 KLSVSQNVDPLLKETK--SLGRLSVSQNSDPSTKETKSIGRSSTSQNSESSMKESKPLGR 397
Query: 185 LSVSQNSEPAKESKVLSSTGSVPGTPQRVN-LNMGSKTSVVN---STAVVSKRTSTRANT 240
LSVSQNS+ +KES+ SSTGS+PGTP RV+ N+ TS V+ S A S+R T+AN
Sbjct: 398 LSVSQNSDVSKESRTFSSTGSLPGTPHRVSSTNVSKATSGVSTAVSNAATSRRNFTKANP 457
Query: 241 ASNVPILNKSDIVPVIVPRTNTRFEQAVESRKDIDVIGRTMPFSLQSKATDSRKFQNSGD 300
+N P+ +D PVIVPR + R EQA ESR ++D+I RTMP+SLQ A DSR+ +S +
Sbjct: 458 KAN-PVNKAADFAPVIVPRADPRIEQATESRAELDIIARTMPYSLQ--AADSRRSPSSRN 514
Query: 301 EVDQPAVSVLCENTGSKATEVSSVADRNTFAAIKGSIQGVSVTERNSKEDIFTVSGKSGT 360
D P SVL E + S+ E +++ D T K ++G TER+ + + G+S +
Sbjct: 515 NPDLPDASVL-EMSESQPVEPNNIPDGGTLPGGKVGMRGA--TERSINDFRYKRYGRSNS 571
Query: 361 MSMSESPASYEDERYDSLGHKSNRDGYAMESQKRGRMHSLVINWEKRGSSPNYDGPXXXX 420
S SP DE YD + H+SNRD ESQK GR SLVIN E+RG N++GP
Sbjct: 572 RSRMGSPPRNHDENYDLVSHRSNRDPSPTESQKGGRFQSLVINRERRGRFSNFEGPVSNF 631
Query: 421 XXXXXXXXXMPPFNAFKQRGYSSSAEKETASVSDEDATADVMEQHSQFVSSMQSRLAKLQ 480
+ P N FKQRG E+ S S+E+ D+M +H+QFVSSMQSRLAKLQ
Sbjct: 632 SSGNMPAPNIRPSNMFKQRGNHMPVEQGIDSPSEENIVEDIMGKHNQFVSSMQSRLAKLQ 691
Query: 481 AVYRYWERNDVKGAISAMQKMADHTVLADVMSIVVEKIEIVTLDICSCXXXXXXXXXESD 540
V RYWERNDVK +I +++KMAD+ V ADV+ I+ E+ EI+TLD C+ S
Sbjct: 692 VVRRYWERNDVKNSIGSIEKMADNAVTADVLGIITERNEILTLDNCTSLLPLLTALLGSG 751
Query: 541 MDRHLSISLDILLKLVRTFGSMIYSAISASTSVGVDIEAEQRIERCNRCFIELEKVKCCL 600
MD+HLS+SLD+LLKLVR +GS IYS++SA SVGVDIEAEQRIER +RCF+ELEKVK CL
Sbjct: 752 MDQHLSVSLDLLLKLVRLYGSPIYSSLSAPASVGVDIEAEQRIERYSRCFVELEKVKACL 811
Query: 601 PTLMRRGGSVAKSAQELNLALQDVS 625
P+L RRGG VAKS ELNLA Q+VS
Sbjct: 812 PSLARRGGLVAKSVLELNLAFQEVS 836
Score = 785 (281.4 bits), Expect = 2.8e-80, Sum P(2) = 2.8e-80
Identities = 197/415 (47%), Positives = 243/415 (58%)
Query: 8 SGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFSWEPIRCH 67
+GSADRTVKFWDLETFELIGS GPET+GVRCL+FNPDG+T+LCGL ESLK+FSWEPIRCH
Sbjct: 202 TGSADRTVKFWDLETFELIGSGGPETAGVRCLSFNPDGKTVLCGLQESLKIFSWEPIRCH 261
Query: 68 DAVDVGWSRLSDLNVHEGKLLGCSYNQSCVGVWVVDISRIEPYTIGSVTRVNGLSESKSS 127
D VDVGWSRLSD+NVHEGKLLGCSYNQSCVGVWVVD+SR EP G + NG E +S
Sbjct: 262 DGVDVGWSRLSDMNVHEGKLLGCSYNQSCVGVWVVDLSRTEPCMAGDTAQSNGHPEKRSC 321
Query: 128 ASGNLSVLNENSAKASLGKLSVSQNSDPLVKETKSLGRLSVSQNSDPLLKETKTLGRLSV 187
+ + VLN+N++K LGKLSVSQN DPL+KETKSLGRLSVSQNSDP KETK++GR S
Sbjct: 322 SGRDPVVLNDNNSKTVLGKLSVSQNVDPLLKETKSLGRLSVSQNSDPSTKETKSIGRSST 381
Query: 188 SQNSEPA-KESKVLS----STGSVPGTPQRVNLNMGSKTSVVN--STAVVSKRTSTRANT 240
SQNSE + KESK L S S R + GS + S+ VSK TS +
Sbjct: 382 SQNSESSMKESKPLGRLSVSQNSDVSKESRTFSSTGSLPGTPHRVSSTNVSKATSGVSTA 441
Query: 241 ASNVPILNKSDIVPVIVPRTNTRFEQAVESRKDIDVIGRTMPFSLQSKATDSRKFQNSGD 300
SN ++ P+ N +A + I + R P Q AT+SR
Sbjct: 442 VSNAATSRRN--FTKANPKANP-VNKAADFAPVI--VPRADPRIEQ--ATESRA------ 488
Query: 301 EVDQPAVSVLCENTGSKATEVSSVADRNTFAAIKGSIQGVSVT---ERNSKEDIFTV-SG 356
E+D ++ + A S + RN S+ +S + E N+ D T+ G
Sbjct: 489 ELD--IIARTMPYSLQAADSRRSPSSRNNPDLPDASVLEMSESQPVEPNNIPDGGTLPGG 546
Query: 357 KSGTMSMSESPASYEDERYDSLGHKSNRDGYAMESQKRGRMHSLVINWEKRGSSP 411
K G +E S D RY G ++R + + LV + R SP
Sbjct: 547 KVGMRGATER--SINDFRYKRYGRSNSRSRMGSPPRNHDENYDLVSHRSNRDPSP 599
Score = 72 (30.4 bits), Expect = 2.1e-126, Sum P(2) = 2.1e-126
Identities = 25/98 (25%), Positives = 43/98 (43%)
Query: 8 SGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCG-LHESLKVFSWEPIRC 66
+G+A T+K WDLE +++ + S + F+P G G L +LK+ W+ IR
Sbjct: 76 AGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKI--WD-IRK 132
Query: 67 HDAVDVGWSRLSDLNV----HEGKLLGCSYNQSCVGVW 100
+ +NV +G+ + + V VW
Sbjct: 133 KGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVW 170
Score = 40 (19.1 bits), Expect = 5.1e-123, Sum P(2) = 5.1e-123
Identities = 10/35 (28%), Positives = 16/35 (45%)
Query: 8 SGSADRTVKFWDLETFELIGSAGPETSGVRCLTFN 42
+G D V W + I S +SG+ +TF+
Sbjct: 34 TGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFD 68
>TAIR|locus:2150788 [details] [associations]
symbol:AT5G08390 "AT5G08390" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0010090
"trichome morphogenesis" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0016926 "protein desumoylation" evidence=RCA] [GO:0042546 "cell
wall biogenesis" evidence=RCA] [GO:0044036 "cell wall macromolecule
metabolic process" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0080008
GO:GO:0008352 PANTHER:PTHR19845 OMA:YWERNDI IPI:IPI00533677
RefSeq:NP_568194.2 UniGene:At.10141 UniGene:At.72630
ProteinModelPortal:F4KB17 SMR:F4KB17 PRIDE:F4KB17
EnsemblPlants:AT5G08390.1 GeneID:830737 KEGG:ath:AT5G08390
Uniprot:F4KB17
Length = 839
Score = 1179 (420.1 bits), Expect = 2.4e-125, Sum P(2) = 2.4e-125
Identities = 250/487 (51%), Positives = 320/487 (65%)
Query: 143 SLGKLSVSQNSDPLVKETKSLGRLSVSQNSDPLLKETKTLGRLSVSQNSEPAKESKVLSS 202
SLGKLSVSQNSDPL K+TKS GR SVSQ+SDPL+KE K LGR S + +S+ KES+ LSS
Sbjct: 355 SLGKLSVSQNSDPLPKDTKSTGRSSVSQSSDPLVKEPKPLGRFSATHSSDTVKESRTLSS 414
Query: 203 TGSVPGTPQRVNLNMGSKT----SVVNSTAVVSKRTSTRANTASNVPILNKSDIVPVIVP 258
TGSV +P RV L K+ S V A SKR +AN +N P++NK D PVIVP
Sbjct: 415 TGSVSDSPHRVTLTSAPKSASGISTVVPNAAASKRNFGKANPKANPPVVNKEDYFPVIVP 474
Query: 259 RTNTRFEQAVESRKDIDVIGRTMPFSLQSKATDSRKFQNSGDEVDQPAVSVLCENTGSKA 318
RT EQA ESR ++D+IGRTMP+SLQSKA DSR+ +S +E D P S+L E + S+
Sbjct: 475 RTEPIIEQASESRAELDIIGRTMPYSLQSKAADSRRLSSSRNEPDLPTSSLL-ERSQSQP 533
Query: 319 TEVSSVADRNTFAAIKGSIQGVSVTERNSKEDIFTVSGKSGTMSMSESPASYEDERYDSL 378
E ++ D NT+ + +G ER +KE V G+ + S+ SP DE D +
Sbjct: 534 IEPITLQDGNTYPSDEGG--SWDTAERTNKESKCRVFGRFNSRSLVRSPPRNHDENSDLI 591
Query: 379 GHKSNRDGYAMESQKRGRMHSLVINWEKRGSSPNYDGPXXXXXXXXXXXXXMPPFNAFKQ 438
+ +NRD ES+K GR+HSLV+N E+RG N++GP P N KQ
Sbjct: 592 SYNANRDSSPTESRKGGRLHSLVLNRERRGRFSNFEGPVSSSSGGNMTAPNSRPSNMLKQ 651
Query: 439 RGYSSSAEKETASVSDEDATADVMEQHSQFVSSMQSRLAKLQAVYRYWERNDVKGAISAM 498
RG ++ S S+ED AD+M QH QFVSSM SRLAKLQ V RYWERND+K +IS++
Sbjct: 652 RGNHVPVDQGITSASEEDIVADIMGQHDQFVSSMHSRLAKLQVVRRYWERNDIKNSISSI 711
Query: 499 QKMADHTVLADVMSIVVEKIEIVTLDICSCXXXXXXXXXESDMDRHLSISLDILLKLVRT 558
+KMAD+ V+ADV+ IV E+ EI+TLD C+ S+MD HLS+ LD+LLKLVR
Sbjct: 712 EKMADNAVIADVLLIVNERPEILTLDTCTSLLPLLTALLGSNMDSHLSVCLDLLLKLVRM 771
Query: 559 FGSMIYSAISASTSVGVDIEAEQRIERCNRCFIELEKVKCCLPTLMRRGGSVAKSAQELN 618
+GS IYS++SA +SVGVDIEAEQR+ER + CF+E EK+K CLP+L RRG VAK+ ELN
Sbjct: 772 YGSQIYSSLSAPSSVGVDIEAEQRMERYSCCFVEFEKIKACLPSLARRGNLVAKTLHELN 831
Query: 619 LALQDVS 625
L Q+VS
Sbjct: 832 LTFQEVS 838
Score = 720 (258.5 bits), Expect = 3.7e-71, P = 3.7e-71
Identities = 153/290 (52%), Positives = 200/290 (68%)
Query: 8 SGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFSWEPIRCH 67
+GSAD+TVKFWDLETFELIGS G ET+GVRCLTFNPDG+++LCGL ESLK+FSWEPIRCH
Sbjct: 202 TGSADKTVKFWDLETFELIGSGGTETTGVRCLTFNPDGKSVLCGLQESLKIFSWEPIRCH 261
Query: 68 DAVDVGWSRLSDLNVHEGKLLGCSYNQSCVGVWVVDISRIEPYTIGSVTRVNGLSESKSS 127
D VDVGWS LSD+NVHEGKLLGCSYNQ+CVGVWVVD+SR EP + G T+ N E S
Sbjct: 262 DGVDVGWSNLSDMNVHEGKLLGCSYNQNCVGVWVVDLSRTEPMS-GGATQSNSHPEKTSG 320
Query: 128 ASGNLSVLNENSAKASLGKLSVSQNSDPLVKETKSLGRLSVSQNSDPLLKETKTLGRLSV 187
+ + + LN+NS+K LGKL SQ DPL+KETKSLG+LSVSQNSDPL K+TK+ GR SV
Sbjct: 321 SGRDQAGLNDNSSKVILGKLPGSQKVDPLLKETKSLGKLSVSQNSDPLPKDTKSTGRSSV 380
Query: 188 SQNSEP-AKESKVLSSTGSVPGTPQ-RVNLNMGSKTSVVNSTAVVSKRTSTRANTASNVP 245
SQ+S+P KE K L + + + + + S SV +S V+ ++ ++ + +
Sbjct: 381 SQSSDPLVKEPKPLGRFSATHSSDTVKESRTLSSTGSVSDSPHRVTLTSAPKSASGISTV 440
Query: 246 ILNKSDIVPVIVPRTNTRFEQAVESRKDID--VIGRTMPFSLQSKATDSR 293
+ N + + N + V +++D ++ RT P Q A++SR
Sbjct: 441 VPNAAASKRNF-GKANPKANPPVVNKEDYFPVIVPRTEPIIEQ--ASESR 487
Score = 124 (48.7 bits), Expect = 0.00047, P = 0.00047
Identities = 95/375 (25%), Positives = 143/375 (38%)
Query: 3 GYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESL-KVFSW 61
G F SGS D +K WD+ I + T GV L F PDGR ++ G +++ KV+
Sbjct: 113 GEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDL 172
Query: 62 EPIRCHDAVDVGWSRLSDLNVHEGK-LLGCSYNQSCVGVWVVDISRIEPYTIGSV--TRV 118
+ ++ L+ H + LL V W D+ E G T V
Sbjct: 173 TAGKLLHEFKSHEGKIQSLDFHPHEFLLATGSADKTVKFW--DLETFELIGSGGTETTGV 230
Query: 119 NGLS---ESKSSASG---NLSVLNENSAKASLG-KLSVSQNSDPLVKETKSLGRLSVSQN 171
L+ + KS G +L + + + G + S SD V E K LG S +QN
Sbjct: 231 RCLTFNPDGKSVLCGLQESLKIFSWEPIRCHDGVDVGWSNLSDMNVHEGKLLG-CSYNQN 289
Query: 172 SDPL----LKETKTLGRLSVSQNSEPAKESKVLSSTGSVPGTPQRVNLNMGSKTSVVNST 227
+ L T+ + + NS P K S GS G Q LN S ++
Sbjct: 290 CVGVWVVDLSRTEPMSGGATQSNSHPEKTS------GS--GRDQ-AGLNDNSSKVILGKL 340
Query: 228 AVVSKRTSTRANTAS--NVPILNKSDIVPVIVPRTN-TRFEQAVESR-KDIDVIGRTMPF 283
K T S + + SD +P T + Q+ + K+ +GR
Sbjct: 341 PGSQKVDPLLKETKSLGKLSVSQNSDPLPKDTKSTGRSSVSQSSDPLVKEPKPLGRFSAT 400
Query: 284 SLQSKATDSRKFQNSGDEVDQPAVSVLCENTGSKATEVSSVADRNTFAAIKGSIQGVSVT 343
+SR ++G D P V + A+ +S+V N AA K + G +
Sbjct: 401 HSSDTVKESRTLSSTGSVSDSPH-RVTLTSAPKSASGISTVVP-NA-AASKRNF-GKANP 456
Query: 344 ERN----SKEDIFTV 354
+ N +KED F V
Sbjct: 457 KANPPVVNKEDYFPV 471
Score = 73 (30.8 bits), Expect = 2.4e-125, Sum P(2) = 2.4e-125
Identities = 25/98 (25%), Positives = 43/98 (43%)
Query: 8 SGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCG-LHESLKVFSWEPIRC 66
+G+A T+K WDLE +++ + S + F+P G G L +LK+ W+ IR
Sbjct: 76 AGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKI--WD-IRK 132
Query: 67 HDAVDVGWSRLSDLNV----HEGKLLGCSYNQSCVGVW 100
+ +NV +G+ + + V VW
Sbjct: 133 KGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVW 170
Score = 44 (20.5 bits), Expect = 2.8e-122, Sum P(2) = 2.8e-122
Identities = 18/95 (18%), Positives = 36/95 (37%)
Query: 8 SGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRC 66
+G D V W + I S +SG+ +TF+ + G ++K++ E +
Sbjct: 34 TGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEGLVAAGAASGTIKLWDLEEAKV 93
Query: 67 HDAVDVGWSRLSDLNVHE-GKLLGCSYNQSCVGVW 100
+ S +N H G+ + + +W
Sbjct: 94 VRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIW 128
>TAIR|locus:2202129 [details] [associations]
symbol:AT1G11160 "AT1G11160" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002684 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0080008 GO:GO:0008352 PANTHER:PTHR19845 IPI:IPI00528177
RefSeq:NP_172582.2 UniGene:At.43445 ProteinModelPortal:F4I7E1
SMR:F4I7E1 PRIDE:F4I7E1 EnsemblPlants:AT1G11160.1 GeneID:837657
KEGG:ath:AT1G11160 OMA:DETHATQ Uniprot:F4I7E1
Length = 1021
Score = 421 (153.3 bits), Expect = 2.1e-76, Sum P(2) = 2.1e-76
Identities = 97/236 (41%), Positives = 135/236 (57%)
Query: 8 SGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFSWEPIRCH 67
+GSADRTVKFWDLETFELIG+ PE +GVR + F+PDG+TL CGL + LKV+SWEP+ C
Sbjct: 201 TGSADRTVKFWDLETFELIGTTRPEATGVRAIAFHPDGQTLFCGLDDGLKVYSWEPVICR 260
Query: 68 DAVDVGWSRLSDLNVHEGKLLGCSYNQSCVGVWVVDISRIEPYTIGSVTRVNGLSESKSS 127
D VD+GWS L D ++EGK +GCSY ++ VG+WV DIS +EPY G+V SE K+
Sbjct: 261 DGVDMGWSTLGDFCINEGKFIGCSYYRNSVGIWVSDISELEPY--GAV------SEDKNE 312
Query: 128 AS-GNLSVLNENSAKASLGKLSVSQNSDPLVKETKSL------GRLSVSQNSDPLLKETK 180
SVLN+ S + G S + D +E K++ G L+V+QN L K T
Sbjct: 313 CMVKRFSVLNDQSERMGSGPRG-SVSPDYETREIKNIYVDSTGGNLNVAQNPGSL-KATL 370
Query: 181 TLGRLSVSQNSEPAKESKVLSSTGSVPGTPQRVNLNMGSKTSVVNSTAVVSKRTST 236
L V+ + + G + R + + G ++S ++ RT +
Sbjct: 371 PLESGKVATMVSEKQNAAYFGPAGDKYSSTSR-DSDSGEESSYSERESIPFSRTKS 425
Score = 417 (151.9 bits), Expect = 2.1e-76, Sum P(2) = 2.1e-76
Identities = 86/182 (47%), Positives = 123/182 (67%)
Query: 446 EKETASVSDEDATADVMEQ----HSQFVSSMQSRLAKLQAVYRYWERNDVKGAISAMQKM 501
+KE ++SD + +D+ E H++F+S++QSRL KLQ V +WER+DVKGAI A++K+
Sbjct: 839 QKEEPNISDREDDSDITENLMLTHNEFLSTLQSRLTKLQIVRHFWERSDVKGAIGALRKL 898
Query: 502 ADHTVLADVMSIVVEKIEIVTLDICSCXXXXXXXXXESDMDRHLSISLDILLKLVRTFGS 561
D +V ADV+SI+ EKIEI+TLD+ S S +R +++SLD+LLKLV FG+
Sbjct: 899 TDQSVQADVISILTEKIEILTLDMFSQLVPVLTSLLGSRTERPVNVSLDMLLKLVAVFGT 958
Query: 562 MIYSAISASTSVGVDIEAEQRIERCNRCFIELEKVKCCLPTLMRRGGSVAKSAQELNLAL 621
+I S +SA VGVD+ A +R+E C C L K++ LP L RRGG + + AQELNL L
Sbjct: 959 VIRSTVSAPRIVGVDLHANERLEICQICSAGLHKIQRILPVLARRGGLITRKAQELNLVL 1018
Query: 622 QD 623
Q+
Sbjct: 1019 QE 1020
Score = 64 (27.6 bits), Expect = 1.2e-39, Sum P(3) = 1.2e-39
Identities = 15/56 (26%), Positives = 29/56 (51%)
Query: 8 SGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHES-LKVFSWE 62
+G++ +K WDLE +++ + S + F+P G L G ++ L+V W+
Sbjct: 75 AGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRV--WD 128
Score = 60 (26.2 bits), Expect = 3.1e-39, Sum P(3) = 3.1e-39
Identities = 14/41 (34%), Positives = 19/41 (46%)
Query: 3 GYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNP 43
G + SG D VK WDL +L+ +R L F+P
Sbjct: 154 GRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDFHP 194
Score = 52 (23.4 bits), Expect = 2.1e-38, Sum P(3) = 2.1e-38
Identities = 23/96 (23%), Positives = 39/96 (40%)
Query: 8 SGSADRTVKFWDL-ETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHES-LKVFSWEPIR 65
+G D V W + +T + G TS V + FN + +L G +K++ E +
Sbjct: 33 TGGDDYKVNLWSIGKTTSPMSLCG-HTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEESK 91
Query: 66 CHDAVDVGWSRLSDLNVHE-GKLLGCSYNQSCVGVW 100
A S S + H G+ L + + + VW
Sbjct: 92 MVRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRVW 127
Score = 45 (20.9 bits), Expect = 1.2e-39, Sum P(3) = 1.2e-39
Identities = 21/94 (22%), Positives = 34/94 (36%)
Query: 315 GSKATEVSSVADRNTFAAIKGSIQGVSVTERNSKEDIFTVSGKSGTMSMSESPASYEDER 374
GS + + + +N + G V+ + K + SGK TM + A+Y
Sbjct: 334 GSVSPDYETREIKNIYVDSTGGNLNVAQNPGSLKATLPLESGKVATMVSEKQNAAYFGPA 393
Query: 375 YDSLGHKSNRDGYAMESQKRGRMHSLVINWEKRG 408
D S RD + E S+ + K G
Sbjct: 394 GDKYSSTS-RDSDSGEESSYSERESIPFSRTKSG 426
>UNIPROTKB|Q5ZIU8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0000922 "spindle
pole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 HOGENOM:HOG000008039
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 EMBL:DQ410670
EMBL:AJ720686 IPI:IPI00822740 RefSeq:NP_001025730.1
UniGene:Gga.7972 ProteinModelPortal:Q5ZIU8 GeneID:415631
KEGG:gga:415631 CTD:10300 HOVERGEN:HBG052294 NextBio:20819203
Uniprot:Q5ZIU8
Length = 657
Score = 303 (111.7 bits), Expect = 1.0e-37, Sum P(2) = 1.0e-37
Identities = 77/213 (36%), Positives = 111/213 (52%)
Query: 2 SGYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFSW 61
S Y SGS+DRT++FWDLE F ++ E + VRC+ FNPDG L G +SL+V+ W
Sbjct: 200 SEYLLASGSSDRTIRFWDLEKFHVVSCIEEEATPVRCILFNPDGCCLYGGFQDSLRVYGW 259
Query: 62 EPIRCHDAVDVGWSRLSDLNVHEGKLLGCSYNQSCVGVWVVDISRIEPYTIGSVTRVNGL 121
EP RC D V V W +++DL+V +L+G S+ QS V +VVD+SR+ GSV +GL
Sbjct: 260 EPERCFDVVVVNWGKVADLSVCHNQLIGVSFAQSTVSSFVVDLSRVTKS--GSVP--HGL 315
Query: 122 SESKSSASGNLSVLNENSAKASLGKLSVSQNSDPLVKETKSLGRLSVSQNSDPLLKETKT 181
+ + +S + S + S S + VK + R S S D KE+K
Sbjct: 316 LRNNELLAQPTPT--GSSLRRSYDRPSTSCSKPQRVKHSSESERRSPSSEEDRDEKESK- 372
Query: 182 LGRLSVSQNSEPAKESKVLSSTGSVPGTPQRVN 214
+ QN E KE + ++ TP +N
Sbjct: 373 ----AEIQNPEDYKE--IFQPRNAISRTPPHIN 399
Score = 177 (67.4 bits), Expect = 1.0e-37, Sum P(2) = 1.0e-37
Identities = 40/172 (23%), Positives = 82/172 (47%)
Query: 450 ASVSDEDATADVMEQHSQFVSSMQSRLAKLQAVYRYWERNDVKGAISAMQKMADHTVLAD 509
A ++DE+ + + + H + SR L V W +D+K ++ A D +V+ D
Sbjct: 482 AELTDEEIMSQIRKGHKTVCMVLTSRHKNLDTVRAVWSTSDMKNSVDAAVATNDLSVVVD 541
Query: 510 VMSIVVEKIEIVTLDICSCXXXXXXXXXESDMDRHLSISLDILLKLVRTFGSMIYSAISA 569
+++IV + + LD+C+ +S + ++ L +++ F +I ++A
Sbjct: 542 LLNIVNQTASLWKLDLCTVVLPQIEKLLQSKYESYVQTGCTSLKLILQRFLPLITDILAA 601
Query: 570 STSVGVDIEAEQRIERCNRCFIELEKVKCCLPTLMRRGGSVAKSAQELNLAL 621
SVGVDI E+R+ +C C+ +L+ + + G + +EL+L +
Sbjct: 602 PPSVGVDITREERLHKCRLCYKQLKNISNIVKNKSGLSGRHGSAFRELHLLM 653
Score = 93 (37.8 bits), Expect = 9.3e-15, Sum P(2) = 9.3e-15
Identities = 20/46 (43%), Positives = 24/46 (52%)
Query: 3 GYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTL 48
G F SGS D +K WD+ I T VRCL F+PDG+ L
Sbjct: 117 GSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWL 162
Score = 65 (27.9 bits), Expect = 7.4e-12, Sum P(2) = 7.4e-12
Identities = 21/64 (32%), Positives = 28/64 (43%)
Query: 8 SGSADRTVKFWDLET----FELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFSWEP 63
S + D TVK WDL FE G +GP V + F+P L G + F W+
Sbjct: 164 SAADDHTVKLWDLTAGKVMFEFTGHSGP----VNVVEFHPSEYLLASGSSDRTIRF-WDL 218
Query: 64 IRCH 67
+ H
Sbjct: 219 EKFH 222
Score = 58 (25.5 bits), Expect = 3.9e-11, Sum P(2) = 3.9e-11
Identities = 14/56 (25%), Positives = 29/56 (51%)
Query: 8 SGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCG-LHESLKVFSWE 62
+GS +++ WDLE +++ + + + L F+P G + G L +K+ W+
Sbjct: 80 AGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKL--WD 133
Score = 48 (22.0 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 16/63 (25%), Positives = 32/63 (50%)
Query: 321 VSSVADRNTFAAIKGSIQGVSVTERNSKEDIFTVSGKSGTMSMSESPASYEDERYDSLGH 380
V SV N ++ G + + ++KE++ +SG++ + + A+ + R LGH
Sbjct: 47 VWSVNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAA-KILR-TLLGH 104
Query: 381 KSN 383
K+N
Sbjct: 105 KAN 107
Score = 37 (18.1 bits), Expect = 5.8e-09, Sum P(2) = 5.8e-09
Identities = 17/64 (26%), Positives = 25/64 (39%)
Query: 85 GKLLGCSYNQSCVGVWVVDISRIEPYTIGSVTRVNGLSESKS-------SASGNLSVLNE 137
G+LL + V VW V+ G T + L S S SG++ V +
Sbjct: 33 GRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDL 92
Query: 138 NSAK 141
+AK
Sbjct: 93 EAAK 96
>MGI|MGI:1921437 [details] [associations]
symbol:Katnb1 "katanin p80 (WD40-containing) subunit B 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
"centrosome" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=ISO] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0010976 "positive
regulation of neuron projection development" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051013 "microtubule severing"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1921437 GO:GO:0005886 GO:GO:0005813
GO:GO:0010976 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030426 GO:GO:0010942 GO:GO:0030496 GO:GO:0008568
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0045502
HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845
CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP
GO:GO:0031117 EMBL:AK010364 EMBL:AK031630 EMBL:AK034103
EMBL:AK049345 EMBL:AK087973 EMBL:BC024500 EMBL:BC045200
IPI:IPI00221459 RefSeq:NP_083081.2 UniGene:Mm.28382
ProteinModelPortal:Q8BG40 SMR:Q8BG40 STRING:Q8BG40
PhosphoSite:Q8BG40 PaxDb:Q8BG40 PRIDE:Q8BG40
Ensembl:ENSMUST00000034239 GeneID:74187 KEGG:mmu:74187
UCSC:uc009mxt.1 InParanoid:Q8BG40 NextBio:340036 Bgee:Q8BG40
CleanEx:MM_KATNB1 Genevestigator:Q8BG40
GermOnline:ENSMUSG00000031787 Uniprot:Q8BG40
Length = 658
Score = 269 (99.8 bits), Expect = 2.2e-35, Sum P(2) = 2.2e-35
Identities = 93/311 (29%), Positives = 142/311 (45%)
Query: 4 YFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFSWEP 63
Y SGS+DRT++FWDLE F+++ E VR + FNPDG L G +SL+V+ WEP
Sbjct: 202 YLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLRVYGWEP 261
Query: 64 IRCHDAVDVGWSRLSDLNVHEGKLLGCSYNQSCVGVWVVDISRIEPYTIGSVTRVNGLSE 123
RC D V V W +++DL + +L+G +++QS V +VVD++R VTR +++
Sbjct: 262 ERCFDVVLVNWGKVADLAICNDQLIGVAFSQSNVSSYVVDLTR--------VTRTGTVTQ 313
Query: 124 SKSSASGNLSVLNENSAKASLGKL----SVSQNSDPLVKETKSLGRLSVSQNSDPLLKET 179
A+ L+ N SL ++ S + + VK R S S D +E+
Sbjct: 314 DPVQANQPLTQQTPNPG-VSLRRIYERPSTTCSKPQRVKHNSESERRSPSSEDDRDERES 372
Query: 180 KTLGRLSVSQNSEPAKESKVLSSTGSVPGTPQRVNLNMGSKTSVVNSTAV-VSKRTSTRA 238
R + QN+E E + S+ TP R + + +T VSK +
Sbjct: 373 ----RAEI-QNAEDYNE--IFQPKNSISRTPPRRSEPFPAPPEDDAATVKEVSKPSPAMD 425
Query: 239 NTASNVPILNKSDIVPVIVPRTNTRFEQAVESRKDIDVIGRTMPFSLQ-SKATDSRKFQN 297
+P+ N VP P T A + DI R P L+ S + K
Sbjct: 426 VQLPQLPVPNLE--VPAR-PSVMTS-TPAPKGEPDIIPATRNEPIGLKASDFLPAVKVPQ 481
Query: 298 SGDEVDQPAVS 308
+ VD+ A+S
Sbjct: 482 QAELVDEDAMS 492
Score = 192 (72.6 bits), Expect = 2.2e-35, Sum P(2) = 2.2e-35
Identities = 43/174 (24%), Positives = 85/174 (48%)
Query: 448 ETASVSDEDATADVMEQHSQFVSSMQSRLAKLQAVYRYWERNDVKGAISAMQKMADHTVL 507
+ A + DEDA + + + H + SR L V W D+K ++ + + D +V+
Sbjct: 481 QQAELVDEDAMSQIRKGHDTMFVVLTSRHKNLDTVRAVWTTGDIKTSVDSAVAINDLSVV 540
Query: 508 ADVMSIVVEKIEIVTLDICSCXXXXXXXXXESDMDRHLSISLDILLKLVRTFGSMIYSAI 567
D+++IV +K + LD+C+ +S + ++ L +++ F +I +
Sbjct: 541 VDLLNIVNQKASLWKLDLCTTVLPQIEKLLQSKYESYVQTGCTSLKLILQRFLPLITDIL 600
Query: 568 SASTSVGVDIEAEQRIERCNRCFIELEKVKCCLPTLMRRGGSVAKSAQELNLAL 621
+A SVGVDI E+R+ +C CF +L+ + + + G + +EL+L +
Sbjct: 601 AAPPSVGVDISREERLHKCRLCFKQLKSISGLVKSKSGLSGRHGSAFRELHLLM 654
Score = 88 (36.0 bits), Expect = 6.8e-16, Sum P(2) = 6.8e-16
Identities = 18/46 (39%), Positives = 24/46 (52%)
Query: 3 GYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTL 48
G F SGS D +K WD+ + + VRCL F+PDG+ L
Sbjct: 117 GEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWL 162
Score = 66 (28.3 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 39/170 (22%), Positives = 75/170 (44%)
Query: 8 SGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRC 66
S + D TVK WDL +++ T V + F+P+ L G + +++ + E +
Sbjct: 164 SAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQV 223
Query: 67 HDAVD--VGWSRLSDLNVHEGKLL--GCS-----YN---QSCVGVWVVDISRIEPYTIGS 114
++ G R S L +G L GC Y + C V +V+ ++ I +
Sbjct: 224 VSCIEGEPGPVR-SVLFNPDGCCLYSGCQDSLRVYGWEPERCFDVVLVNWGKVADLAICN 282
Query: 115 VTRVNGLSESKSSASGNLSVLNENSAKASLGKLSVSQNSDPLVKETKSLG 164
++ G++ S+S+ S + L + ++ + V N PL ++T + G
Sbjct: 283 -DQLIGVAFSQSNVSSYVVDLTRVTRTGTVTQDPVQANQ-PLTQQTPNPG 330
Score = 60 (26.2 bits), Expect = 5.5e-13, Sum P(2) = 5.5e-13
Identities = 12/55 (21%), Positives = 28/55 (50%)
Query: 8 SGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFSWE 62
+GS +++ WDLE +++ + + + L F+P G + G ++ + W+
Sbjct: 80 AGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDT-NIKLWD 133
Score = 47 (21.6 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 17/72 (23%), Positives = 33/72 (45%)
Query: 314 TGSKATEVS--SVADRNTFAAIKGSIQGVSVTERNSKEDIFTVSGKSGTMSMSESPASYE 371
TG V+ S+ N ++ G V N+ E++ +SG++ + + A+ +
Sbjct: 38 TGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAA-K 96
Query: 372 DERYDSLGHKSN 383
R +GHK+N
Sbjct: 97 ILR-TLMGHKAN 107
>RGD|1311256 [details] [associations]
symbol:Katnb1 "katanin p80 (WD repeat containing) subunit B 1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA;ISO] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010942 "positive regulation of cell death" evidence=IMP]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030496 "midbody" evidence=IDA] [GO:0031117
"positive regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0045502 "dynein binding" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0051013
"microtubule severing" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311256 GO:GO:0005886 GO:GO:0005813 GO:GO:0010976
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030426 GO:GO:0010942 GO:GO:0030496
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 HOGENOM:HOG000008039
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
OMA:NAISRTP GO:GO:0031117 EMBL:CH474006 EMBL:AY953248
IPI:IPI00363482 RefSeq:NP_001019917.1 UniGene:Rn.22157
STRING:Q4VFZ4 Ensembl:ENSRNOT00000019770 GeneID:291852
KEGG:rno:291852 UCSC:RGD:1311256 InParanoid:Q4VFZ4 NextBio:633288
Genevestigator:Q4VFZ4 Uniprot:Q4VFZ4
Length = 655
Score = 268 (99.4 bits), Expect = 2.8e-35, Sum P(2) = 2.8e-35
Identities = 71/211 (33%), Positives = 110/211 (52%)
Query: 4 YFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFSWEP 63
Y SGS+DRT++FWDLE F+++ E VR + FNPDG L G +SL+V+ WEP
Sbjct: 202 YLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLRVYGWEP 261
Query: 64 IRCHDAVDVGWSRLSDLNVHEGKLLGCSYNQSCVGVWVVDISRIEPYTIGSVTR--VNGL 121
RC D V V W +++DL + +L+G +++QS V +VVD++R+ G+VT+ V
Sbjct: 262 ERCFDVVLVNWGKVADLAICNDQLIGVAFSQSNVSSYVVDLTRVT--RTGTVTQDPVQA- 318
Query: 122 SESKSSASGNLSVLNENSAKASLGKLSVSQNSDPLVKETKSLGRLSVSQNSDPLLKETKT 181
S+ ++ + N V S + + S + + VK R S S D +E+
Sbjct: 319 SQPQTQQTPNPGV----SLRRIYERPSTTCSKPQRVKHNSESERRSPSSEDDKDERES-- 372
Query: 182 LGRLSVSQNSEPAKESKVLSSTGSVPGTPQR 212
R + QN+E E + S+ TP R
Sbjct: 373 --RAEI-QNAEDYNE--IFQPKNSISRTPPR 398
Score = 192 (72.6 bits), Expect = 2.8e-35, Sum P(2) = 2.8e-35
Identities = 43/174 (24%), Positives = 85/174 (48%)
Query: 448 ETASVSDEDATADVMEQHSQFVSSMQSRLAKLQAVYRYWERNDVKGAISAMQKMADHTVL 507
+ A + DEDA + + + H + SR L V W D+K ++ + + D +V+
Sbjct: 478 QQAELVDEDAMSQIRKGHDTMCVVLTSRHKNLDTVRAVWTTGDIKTSVDSAVAINDLSVV 537
Query: 508 ADVMSIVVEKIEIVTLDICSCXXXXXXXXXESDMDRHLSISLDILLKLVRTFGSMIYSAI 567
D+++IV +K + LD+C+ +S + ++ L +++ F +I +
Sbjct: 538 VDLLNIVNQKASLWKLDLCTTVLPQIEKLLQSKYESYVQTGCTSLKLILQRFLPLITDIL 597
Query: 568 SASTSVGVDIEAEQRIERCNRCFIELEKVKCCLPTLMRRGGSVAKSAQELNLAL 621
+A SVGVDI E+R+ +C CF +L+ + + + G + +EL+L +
Sbjct: 598 AAPPSVGVDISREERLHKCRLCFKQLKSISGLVKSRSGLSGRHGSAFRELHLLM 651
Score = 88 (36.0 bits), Expect = 6.7e-16, Sum P(2) = 6.7e-16
Identities = 18/46 (39%), Positives = 24/46 (52%)
Query: 3 GYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTL 48
G F SGS D +K WD+ + + VRCL F+PDG+ L
Sbjct: 117 GEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWL 162
Score = 63 (27.2 bits), Expect = 2.7e-13, Sum P(2) = 2.7e-13
Identities = 16/55 (29%), Positives = 25/55 (45%)
Query: 8 SGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFSWE 62
S + D TVK WDL +++ T V + F+P+ L G + F W+
Sbjct: 164 SAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRF-WD 217
Score = 60 (26.2 bits), Expect = 5.4e-13, Sum P(2) = 5.4e-13
Identities = 12/55 (21%), Positives = 28/55 (50%)
Query: 8 SGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFSWE 62
+GS +++ WDLE +++ + + + L F+P G + G ++ + W+
Sbjct: 80 AGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDT-NIKLWD 133
Score = 47 (21.6 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 17/72 (23%), Positives = 33/72 (45%)
Query: 314 TGSKATEVS--SVADRNTFAAIKGSIQGVSVTERNSKEDIFTVSGKSGTMSMSESPASYE 371
TG V+ S+ N ++ G V N+ E++ +SG++ + + A+ +
Sbjct: 38 TGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAA-K 96
Query: 372 DERYDSLGHKSN 383
R +GHK+N
Sbjct: 97 ILR-TLMGHKAN 107
>UNIPROTKB|E1BQV9 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00594543
ProteinModelPortal:E1BQV9 Ensembl:ENSGALT00000001552
ArrayExpress:E1BQV9 Uniprot:E1BQV9
Length = 660
Score = 289 (106.8 bits), Expect = 1.0e-34, Sum P(2) = 1.0e-34
Identities = 74/211 (35%), Positives = 108/211 (51%)
Query: 4 YFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFSWEP 63
Y SGS+ T++FWDLE F ++ E + VRC+ FNPDG L G +SL+V+ WEP
Sbjct: 202 YLLASGSSSMTIRFWDLEKFHVVSCIEEEATPVRCILFNPDGCCLYGGFQDSLRVYGWEP 261
Query: 64 IRCHDAVDVGWSRLSDLNVHEGKLLGCSYNQSCVGVWVVDISRIEPYTIGSVTRVNGLSE 123
RC D V V W +++DL+V +L+G S+ QS V +VVD+SR+ GSV +GL
Sbjct: 262 ERCFDVVVVNWGKVADLSVCHNQLIGVSFAQSTVSSFVVDLSRVTKS--GSVP--HGLLR 317
Query: 124 SKSSASGNLSVLNENSAKASLGKLSVSQNSDPLVKETKSLGRLSVSQNSDPLLKETKTLG 183
+ + +S + S + S S + VK + R S S D KE+K
Sbjct: 318 NNELLAQPTPT--GSSLRRSYDRPSTSCSKPQRVKHSSESERRSPSSEEDRDEKESK--- 372
Query: 184 RLSVSQNSEPAKESKVLSSTGSVPGTPQRVN 214
+ QN E KE + ++ TP +N
Sbjct: 373 --AEIQNPEDYKE--IFQPRNAISRTPPHIN 399
Score = 164 (62.8 bits), Expect = 1.0e-34, Sum P(2) = 1.0e-34
Identities = 39/175 (22%), Positives = 83/175 (47%)
Query: 450 ASVSDEDATADVMEQHSQFVSSMQSRLAKLQAVYRYWERNDVKGAISAMQKMA---DHTV 506
A ++DE+ + + + H + SR L V W +D+K ++++ D +V
Sbjct: 482 AELTDEEIMSQIRKGHKTVCMVLTSRHKNLDTVRAVWSTSDMKARMNSVDAAVATNDLSV 541
Query: 507 LADVMSIVVEKIEIVTLDICSCXXXXXXXXXESDMDRHLSISLDILLKLVRTFGSMIYSA 566
+ D+++IV + + LD+C+ +S + ++ L +++ F +I
Sbjct: 542 VVDLLNIVNQTASLWKLDLCTVVLPQIEKLLQSKYESYVQTGCTSLKLILQRFLPLITDI 601
Query: 567 ISASTSVGVDIEAEQRIERCNRCFIELEKVKCCLPTLMRRGGSVAKSAQELNLAL 621
++A SVGVDI E+R+ +C C+ +L+ + + G + +EL+L +
Sbjct: 602 LAAPPSVGVDITREERLHKCRLCYKQLKNISNIVKNKSGLSGRHGSAFRELHLLM 656
Score = 93 (37.8 bits), Expect = 2.5e-13, Sum P(2) = 2.5e-13
Identities = 20/46 (43%), Positives = 24/46 (52%)
Query: 3 GYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTL 48
G F SGS D +K WD+ I T VRCL F+PDG+ L
Sbjct: 116 GSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWL 161
Score = 71 (30.1 bits), Expect = 4.7e-11, Sum P(2) = 4.7e-11
Identities = 21/64 (32%), Positives = 28/64 (43%)
Query: 8 SGSADRTVKFWDLET----FELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFSWEP 63
S + D TVK WDL FE G GP V + F+P LL S+ + W+
Sbjct: 163 SAADDHTVKLWDLTAGKVMFEFTGHYGP----VNVVEFHPSIEYLLASGSSSMTIRFWDL 218
Query: 64 IRCH 67
+ H
Sbjct: 219 EKFH 222
Score = 58 (25.5 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 14/56 (25%), Positives = 29/56 (51%)
Query: 8 SGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCG-LHESLKVFSWE 62
+GS +++ WDLE +++ + + + L F+P G + G L +K+ W+
Sbjct: 79 AGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKL--WD 132
>UNIPROTKB|F1P0F4 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00821846
Ensembl:ENSGALT00000040449 ArrayExpress:F1P0F4 Uniprot:F1P0F4
Length = 661
Score = 289 (106.8 bits), Expect = 1.0e-34, Sum P(2) = 1.0e-34
Identities = 74/211 (35%), Positives = 108/211 (51%)
Query: 4 YFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFSWEP 63
Y SGS+ T++FWDLE F ++ E + VRC+ FNPDG L G +SL+V+ WEP
Sbjct: 203 YLLASGSSSMTIRFWDLEKFHVVSCIEEEATPVRCILFNPDGCCLYGGFQDSLRVYGWEP 262
Query: 64 IRCHDAVDVGWSRLSDLNVHEGKLLGCSYNQSCVGVWVVDISRIEPYTIGSVTRVNGLSE 123
RC D V V W +++DL+V +L+G S+ QS V +VVD+SR+ GSV +GL
Sbjct: 263 ERCFDVVVVNWGKVADLSVCHNQLIGVSFAQSTVSSFVVDLSRVTKS--GSVP--HGLLR 318
Query: 124 SKSSASGNLSVLNENSAKASLGKLSVSQNSDPLVKETKSLGRLSVSQNSDPLLKETKTLG 183
+ + +S + S + S S + VK + R S S D KE+K
Sbjct: 319 NNELLAQPTPT--GSSLRRSYDRPSTSCSKPQRVKHSSESERRSPSSEEDRDEKESK--- 373
Query: 184 RLSVSQNSEPAKESKVLSSTGSVPGTPQRVN 214
+ QN E KE + ++ TP +N
Sbjct: 374 --AEIQNPEDYKE--IFQPRNAISRTPPHIN 400
Score = 164 (62.8 bits), Expect = 1.0e-34, Sum P(2) = 1.0e-34
Identities = 39/175 (22%), Positives = 83/175 (47%)
Query: 450 ASVSDEDATADVMEQHSQFVSSMQSRLAKLQAVYRYWERNDVKGAISAMQKMA---DHTV 506
A ++DE+ + + + H + SR L V W +D+K ++++ D +V
Sbjct: 483 AELTDEEIMSQIRKGHKTVCMVLTSRHKNLDTVRAVWSTSDMKARMNSVDAAVATNDLSV 542
Query: 507 LADVMSIVVEKIEIVTLDICSCXXXXXXXXXESDMDRHLSISLDILLKLVRTFGSMIYSA 566
+ D+++IV + + LD+C+ +S + ++ L +++ F +I
Sbjct: 543 VVDLLNIVNQTASLWKLDLCTVVLPQIEKLLQSKYESYVQTGCTSLKLILQRFLPLITDI 602
Query: 567 ISASTSVGVDIEAEQRIERCNRCFIELEKVKCCLPTLMRRGGSVAKSAQELNLAL 621
++A SVGVDI E+R+ +C C+ +L+ + + G + +EL+L +
Sbjct: 603 LAAPPSVGVDITREERLHKCRLCYKQLKNISNIVKNKSGLSGRHGSAFRELHLLM 657
Score = 93 (37.8 bits), Expect = 2.5e-13, Sum P(2) = 2.5e-13
Identities = 20/46 (43%), Positives = 24/46 (52%)
Query: 3 GYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTL 48
G F SGS D +K WD+ I T VRCL F+PDG+ L
Sbjct: 117 GSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWL 162
Score = 71 (30.1 bits), Expect = 4.7e-11, Sum P(2) = 4.7e-11
Identities = 21/64 (32%), Positives = 28/64 (43%)
Query: 8 SGSADRTVKFWDLET----FELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFSWEP 63
S + D TVK WDL FE G GP V + F+P LL S+ + W+
Sbjct: 164 SAADDHTVKLWDLTAGKVMFEFTGHYGP----VNVVEFHPSIEYLLASGSSSMTIRFWDL 219
Query: 64 IRCH 67
+ H
Sbjct: 220 EKFH 223
Score = 58 (25.5 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 14/56 (25%), Positives = 29/56 (51%)
Query: 8 SGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCG-LHESLKVFSWE 62
+GS +++ WDLE +++ + + + L F+P G + G L +K+ W+
Sbjct: 80 AGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKL--WD 133
Score = 48 (22.0 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 16/63 (25%), Positives = 32/63 (50%)
Query: 321 VSSVADRNTFAAIKGSIQGVSVTERNSKEDIFTVSGKSGTMSMSESPASYEDERYDSLGH 380
V SV N ++ G + + ++KE++ +SG++ + + A+ + R LGH
Sbjct: 47 VWSVNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAA-KILR-TLLGH 104
Query: 381 KSN 383
K+N
Sbjct: 105 KAN 107
Score = 37 (18.1 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 17/64 (26%), Positives = 25/64 (39%)
Query: 85 GKLLGCSYNQSCVGVWVVDISRIEPYTIGSVTRVNGLSESKS-------SASGNLSVLNE 137
G+LL + V VW V+ G T + L S S SG++ V +
Sbjct: 33 GRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDL 92
Query: 138 NSAK 141
+AK
Sbjct: 93 EAAK 96
>UNIPROTKB|E3W9A3 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0000922
"spindle pole" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IEA]
[GO:0008568 "microtubule-severing ATPase activity" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0031117 "positive regulation
of microtubule depolymerization" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005886 GO:GO:0005813
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0008352
PANTHER:PTHR19845 IPI:IPI00822740 OMA:NAISRTP GO:GO:0031117
EMBL:AADN02065753 EMBL:AADN02065752 ProteinModelPortal:E3W9A3
Ensembl:ENSGALT00000040450 ArrayExpress:E3W9A3 Uniprot:E3W9A3
Length = 661
Score = 273 (101.2 bits), Expect = 3.0e-34, Sum P(2) = 3.0e-34
Identities = 73/212 (34%), Positives = 107/212 (50%)
Query: 5 FHFSGS-ADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFSWEP 63
+ +GS RT++FWDLE F ++ E + VRC+ FNPDG L G +SL+V+ WEP
Sbjct: 202 YPLAGSPVHRTIRFWDLEKFHVVSCIEEEATPVRCILFNPDGCCLYGGFQDSLRVYGWEP 261
Query: 64 IRCHDAVDVGWSRLSDLNVHEGKLLGCSYNQSCVGVWVVDISRIEPYTIGSVTRVNGLSE 123
RC D V V W +++DL+V +L+G S+ QS V +VVD+SR+ GSV +GL
Sbjct: 262 ERCFDVVVVNWGKVADLSVCHNQLIGVSFAQSTVSSFVVDLSRVTKS--GSVP--HGLLR 317
Query: 124 SKSSASGNLSVLNENSAKASLGKLSVS-QNSDPLVKETKSLGRLSVSQNSDPLLKETKTL 182
+ + +S + S + S S VK + R S S D KE+K
Sbjct: 318 NNELLAQPTPT--GSSLRRSYDRPSTSCSKPQSRVKHSSESERRSPSSEEDRDEKESK-- 373
Query: 183 GRLSVSQNSEPAKESKVLSSTGSVPGTPQRVN 214
+ QN E KE + ++ TP +N
Sbjct: 374 ---AEIQNPEDYKE--IFQPRNAISRTPPHIN 400
Score = 177 (67.4 bits), Expect = 3.0e-34, Sum P(2) = 3.0e-34
Identities = 40/172 (23%), Positives = 82/172 (47%)
Query: 450 ASVSDEDATADVMEQHSQFVSSMQSRLAKLQAVYRYWERNDVKGAISAMQKMADHTVLAD 509
A ++DE+ + + + H + SR L V W +D+K ++ A D +V+ D
Sbjct: 486 AELTDEEIMSQIRKGHKTVCMVLTSRHKNLDTVRAVWSTSDMKNSVDAAVATNDLSVVVD 545
Query: 510 VMSIVVEKIEIVTLDICSCXXXXXXXXXESDMDRHLSISLDILLKLVRTFGSMIYSAISA 569
+++IV + + LD+C+ +S + ++ L +++ F +I ++A
Sbjct: 546 LLNIVNQTASLWKLDLCTVVLPQIEKLLQSKYESYVQTGCTSLKLILQRFLPLITDILAA 605
Query: 570 STSVGVDIEAEQRIERCNRCFIELEKVKCCLPTLMRRGGSVAKSAQELNLAL 621
SVGVDI E+R+ +C C+ +L+ + + G + +EL+L +
Sbjct: 606 PPSVGVDITREERLHKCRLCYKQLKNISNIVKNKSGLSGRHGSAFRELHLLM 657
Score = 93 (37.8 bits), Expect = 9.4e-15, Sum P(2) = 9.4e-15
Identities = 20/46 (43%), Positives = 24/46 (52%)
Query: 3 GYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTL 48
G F SGS D +K WD+ I T VRCL F+PDG+ L
Sbjct: 117 GSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWL 162
Score = 59 (25.8 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 19/60 (31%), Positives = 27/60 (45%)
Query: 8 SGSADRTVKFWDLET----FELIGSAGPETSGVRCLTFNPDGRTLLCG-LHESLKVFSWE 62
S + D TVK WDL FE G GP V + F+P L +H +++ + E
Sbjct: 164 SAADDHTVKLWDLTAGKVMFEFTGHYGP----VNVVEFHPSEYPLAGSPVHRTIRFWDLE 219
Score = 58 (25.5 bits), Expect = 4.0e-11, Sum P(2) = 4.0e-11
Identities = 14/56 (25%), Positives = 29/56 (51%)
Query: 8 SGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCG-LHESLKVFSWE 62
+GS +++ WDLE +++ + + + L F+P G + G L +K+ W+
Sbjct: 80 AGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKL--WD 133
Score = 48 (22.0 bits), Expect = 4.3e-10, Sum P(2) = 4.3e-10
Identities = 16/63 (25%), Positives = 32/63 (50%)
Query: 321 VSSVADRNTFAAIKGSIQGVSVTERNSKEDIFTVSGKSGTMSMSESPASYEDERYDSLGH 380
V SV N ++ G + + ++KE++ +SG++ + + A+ + R LGH
Sbjct: 47 VWSVNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAA-KILR-TLLGH 104
Query: 381 KSN 383
K+N
Sbjct: 105 KAN 107
Score = 37 (18.1 bits), Expect = 5.9e-09, Sum P(2) = 5.9e-09
Identities = 17/64 (26%), Positives = 25/64 (39%)
Query: 85 GKLLGCSYNQSCVGVWVVDISRIEPYTIGSVTRVNGLSESKS-------SASGNLSVLNE 137
G+LL + V VW V+ G T + L S S SG++ V +
Sbjct: 33 GRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDL 92
Query: 138 NSAK 141
+AK
Sbjct: 93 EAAK 96
>UNIPROTKB|E2QTQ5 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 RefSeq:XP_850865.1
ProteinModelPortal:E2QTQ5 Ensembl:ENSCAFT00000013754 GeneID:612852
KEGG:cfa:612852 NextBio:20898345 Uniprot:E2QTQ5
Length = 655
Score = 264 (98.0 bits), Expect = 3.4e-34, Sum P(2) = 3.4e-34
Identities = 73/212 (34%), Positives = 108/212 (50%)
Query: 4 YFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFSWEP 63
Y SGS+DRT++FWDLE F+++ E VR + FNPDG L G +SL+V+ WEP
Sbjct: 202 YLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLRVYGWEP 261
Query: 64 IRCHDAVDVGWSRLSDLNVHEGKLLGCSYNQSCVGVWVVDISRI-EPYTIGS--VTRVNG 120
RC D V V W +++DL V +L+G +++QS V +VVD++R+ T+ V
Sbjct: 262 ERCFDVVLVSWGKVADLAVCNDQLIGVAFSQSNVSSYVVDLTRVTRTGTVAQDPVQDSRP 321
Query: 121 LSESKSSASGNLSVLNENSAKASLGKLSVSQNSDPLVKETKSLGRLSVSQNSDPLLKETK 180
L++ + S L + E + A V QNS+ E R S S D +E+
Sbjct: 322 LAQQPAHPSAPLRRIYERPSTACNKPQRVKQNSE---SE-----RRSPSSEDDRDERES- 372
Query: 181 TLGRLSVSQNSEPAKESKVLSSTGSVPGTPQR 212
R + QN+E E + S+ TP R
Sbjct: 373 ---RAEI-QNTEEYNE--IFQPKNSISRTPPR 398
Score = 186 (70.5 bits), Expect = 3.4e-34, Sum P(2) = 3.4e-34
Identities = 41/168 (24%), Positives = 82/168 (48%)
Query: 454 DEDATADVMEQHSQFVSSMQSRLAKLQAVYRYWERNDVKGAISAMQKMADHTVLADVMSI 513
DEDA + + + H + SR L V W D+K ++ + + D +V+ D+++I
Sbjct: 484 DEDAMSQIRKGHDTMCVVLTSRHKNLDTVRAVWTTGDIKTSVDSAVAINDLSVVVDLLNI 543
Query: 514 VVEKIEIVTLDICSCXXXXXXXXXESDMDRHLSISLDILLKLVRTFGSMIYSAISASTSV 573
V +K + LD+C+ +S + ++ L +++ F +I ++A SV
Sbjct: 544 VNQKASLWKLDLCTTVLPQIEKLLQSKYESYVQTGCTSLKLILQRFLPLITDILAAPPSV 603
Query: 574 GVDIEAEQRIERCNRCFIELEKVKCCLPTLMRRGGSVAKSAQELNLAL 621
GVDI E+R+ +C C+ +L+ + + + G + +EL+L +
Sbjct: 604 GVDISREERLHKCRLCYKQLKSISGLVKSKSSLSGRHGSAFRELHLLM 651
Score = 88 (36.0 bits), Expect = 3.1e-15, Sum P(2) = 3.1e-15
Identities = 18/46 (39%), Positives = 24/46 (52%)
Query: 3 GYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTL 48
G F SGS D +K WD+ + + VRCL F+PDG+ L
Sbjct: 117 GEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWL 162
Score = 63 (27.2 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 16/55 (29%), Positives = 25/55 (45%)
Query: 8 SGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFSWE 62
S + D TVK WDL +++ T V + F+P+ L G + F W+
Sbjct: 164 SAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRF-WD 217
Score = 60 (26.2 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 12/55 (21%), Positives = 28/55 (50%)
Query: 8 SGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFSWE 62
+GS +++ WDLE +++ + + + L F+P G + G ++ + W+
Sbjct: 80 AGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDT-NIKLWD 133
Score = 47 (21.6 bits), Expect = 5.5e-11, Sum P(2) = 5.5e-11
Identities = 17/72 (23%), Positives = 33/72 (45%)
Query: 314 TGSKATEVS--SVADRNTFAAIKGSIQGVSVTERNSKEDIFTVSGKSGTMSMSESPASYE 371
TG V+ S+ N ++ G V N+ E++ +SG++ + + A+ +
Sbjct: 38 TGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAA-K 96
Query: 372 DERYDSLGHKSN 383
R +GHK+N
Sbjct: 97 ILR-TLMGHKAN 107
>ZFIN|ZDB-GENE-040426-1954 [details] [associations]
symbol:katnb1 "katanin p80 (WD repeat containing)
subunit B 1" species:7955 "Danio rerio" [GO:0008017 "microtubule
binding" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1954 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 HOGENOM:HOG000008039 GO:GO:0008352
HAMAP:MF_03022 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
EMBL:BC047819 IPI:IPI00483795 RefSeq:NP_998183.1 UniGene:Dr.76809
ProteinModelPortal:Q7ZUV2 Ensembl:ENSDART00000014632 GeneID:406291
KEGG:dre:406291 InParanoid:Q7ZUV2 OMA:YWERNDI OrthoDB:EOG470TGV
NextBio:20817922 ArrayExpress:Q7ZUV2 Bgee:Q7ZUV2 Uniprot:Q7ZUV2
Length = 694
Score = 286 (105.7 bits), Expect = 7.2e-22, P = 7.2e-22
Identities = 112/389 (28%), Positives = 162/389 (41%)
Query: 4 YFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFSWEP 63
Y SGSADRTVK WDLE F +IGS+ ET VR + FNPDG L G +L+V+ WEP
Sbjct: 202 YLLASGSADRTVKLWDLEKFNMIGSSEGETGVVRSVLFNPDGSCLYSGSENTLRVYGWEP 261
Query: 64 IRCHDAVDVGWSRLSDLNVHEGKLLGCSYNQSCVGVWVVDISRIEPYTIGSVTRVNGLSE 123
RC D V VGW ++SDL + +++ SY+ + V +VVD++R++ GSV + GL +
Sbjct: 262 DRCFDVVHVGWGKVSDLAISNNQMIAVSYSHTNVSWYVVDLNRVKKS--GSV--IQGLIQ 317
Query: 124 SK-----SSASGNLSVLNENSAKASLGKLSVSQNSDPLVKETKSLGRLSVSQNSDPLLKE 178
K SSA G N S + Q+S+ + + R S++ KE
Sbjct: 318 DKPIPAPSSALGTTLRRNYERPTTSCTGQEMKQSSEADRRSPEGERRSPSSEDE----KE 373
Query: 179 TKTLGRLSVSQNSEPAKE----SKVLSSTGSVPGTPQRVNLNMGSKTSVVNS-------- 226
K ++ N E KE V+S T P L SV+
Sbjct: 374 DKE-SSAEIT-NPEDYKEIFQPRSVISRTPPKTTEPFPAPLEHSFSESVLEKPGPVVKIV 431
Query: 227 TAVVSKRTSTRANTASNVPILNKSDIVPVIVPRTNTRFEQAVESRKDIDVIGRTMPFSLQ 286
T V+ + + S+ P+ V PR + S V+ T P
Sbjct: 432 TPVIDRAGQLKGPITSSTPVQRVEPTVIAAAPRPVAVVTTSASSPSR-PVVNTTKP---- 486
Query: 287 SKATDSRKFQNSGDEVDQPAVSVLCENTGSKATEVSSVADRNTFAAI-KG-SIQGVSVTE 344
K + + + A L +KA S++ D A I KG V ++
Sbjct: 487 -KPSTGIILSTRNEPIGLNAGDFLSHARNAKA---SAMGDEEALAQIRKGHDTMCVMLSS 542
Query: 345 RNSKEDIFTVSGKSGTMSMS-ESPASYED 372
R+ D SG + S +S S D
Sbjct: 543 RSKNLDSVRSVWASGDVKTSLDSAVSMND 571
Score = 189 (71.6 bits), Expect = 2.6e-16, Sum P(2) = 2.6e-16
Identities = 43/180 (23%), Positives = 87/180 (48%)
Query: 442 SSSAEKETASVSDEDATADVMEQHSQFVSSMQSRLAKLQAVYRYWERNDVKGAISAMQKM 501
S + + +++ DE+A A + + H + SR L +V W DVK ++ + M
Sbjct: 510 SHARNAKASAMGDEEALAQIRKGHDTMCVMLSSRSKNLDSVRSVWASGDVKTSLDSAVSM 569
Query: 502 ADHTVLADVMSIVVEKIEIVTLDICSCXXXXXXXXXESDMDRHLSISLDILLKLVRTFGS 561
D +++ DV++I+ K + LD+C+ +S + ++ L +++ F
Sbjct: 570 NDLSIVVDVLNIINLKPSLWKLDLCTSILPQIEELLQSRYESYVQTGCMSLKLILKRFWP 629
Query: 562 MIYSAISASTSVGVDIEAEQRIERCNRCFIELEKVKCCLPTLMRRGGSVAKSAQELNLAL 621
+I ++A SVGVDI E+R ++C C+ +L+ + + + G + +EL L +
Sbjct: 630 LISDTLNAPPSVGVDITREERHQKCKACYKQLKNLSNVVKNRAEQVGRHGSTFRELQLLM 689
Score = 96 (38.9 bits), Expect = 2.6e-16, Sum P(2) = 2.6e-16
Identities = 37/126 (29%), Positives = 52/126 (41%)
Query: 3 GYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFSWE 62
G + SGS D +K WD+ + T VRCL F+PDG+ L +S V W+
Sbjct: 117 GEYLASGSVDSNIKLWDVRRKGCVFRYKGHTQAVRCLAFSPDGKWLASASDDST-VKLWD 175
Query: 63 PIRCHDAVDVGWSRLSDLNV---HEGK-LLGCSYNQSCVGVWVVDISRIEPYTIGSVTRV 118
I + S S +NV H + LL V +W D+ + IGS
Sbjct: 176 LI-AGKMITEFTSHTSAVNVVQFHPNEYLLASGSADRTVKLW--DLEKFN--MIGSSEGE 230
Query: 119 NGLSES 124
G+ S
Sbjct: 231 TGVVRS 236
Score = 75 (31.5 bits), Expect = 3.9e-14, Sum P(2) = 3.9e-14
Identities = 28/107 (26%), Positives = 45/107 (42%)
Query: 2 SGYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCG-LHESLKVFS 60
SG +G D V W + I S TS V C+ FN ++ G L SL+++
Sbjct: 32 SGRLLATGGEDCRVNIWAVSKPNCIMSLTGHTSAVGCIQFNSSEERVVAGSLSGSLRLWD 91
Query: 61 WEPIRCHDAVDVGWSRLSDLNVHE-GKLLGCSYNQSCVGVWVVDISR 106
E + + + +S L+ H G+ L S + +W D+ R
Sbjct: 92 LEAAKILRTLMGHKASISSLDFHPMGEYLASGSVDSNIKLW--DVRR 136
Score = 52 (23.4 bits), Expect = 9.4e-12, Sum P(2) = 9.4e-12
Identities = 27/110 (24%), Positives = 49/110 (44%)
Query: 314 TGSKATEVS--SVADRNTFAAIKGSIQGVSVTERNSKEDIFTVSGKSGTMSMSESPASYE 371
TG + V+ +V+ N ++ G V + NS E+ SG++ + + A+ +
Sbjct: 38 TGGEDCRVNIWAVSKPNCIMSLTGHTSAVGCIQFNSSEERVVAGSLSGSLRLWDLEAA-K 96
Query: 372 DERYDSLGHK---SNRDGYAM-ESQKRGRMHSLVINWE--KRGSSPNYDG 415
R +GHK S+ D + M E G + S + W+ ++G Y G
Sbjct: 97 ILR-TLMGHKASISSLDFHPMGEYLASGSVDSNIKLWDVRRKGCVFRYKG 145
>UNIPROTKB|Q9BVA0 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0005874 "microtubule"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0010942 "positive regulation of cell death" evidence=IEA]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth
cone" evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IDA] [GO:0000922 "spindle pole" evidence=IDA]
[GO:0006605 "protein targeting" evidence=NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IMP]
[GO:0008352 "katanin complex" evidence=IDA;TAS] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 GO:GO:0006605 GO:GO:0010976
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0008017 EMBL:CH471092
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 GO:GO:0007026
EMBL:AC092118 HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022
PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV
EMBL:AF052432 EMBL:BT007022 EMBL:CR456762 EMBL:BC001353
IPI:IPI00746256 RefSeq:NP_005877.2 UniGene:Hs.275675
UniGene:Hs.732486 ProteinModelPortal:Q9BVA0 SMR:Q9BVA0
STRING:Q9BVA0 PhosphoSite:Q9BVA0 DMDM:60390213 PaxDb:Q9BVA0
PRIDE:Q9BVA0 DNASU:10300 Ensembl:ENST00000379661 GeneID:10300
KEGG:hsa:10300 UCSC:uc002eml.1 GeneCards:GC16P057770 HGNC:HGNC:6217
HPA:HPA041165 HPA:HPA041839 MIM:602703 neXtProt:NX_Q9BVA0
PharmGKB:PA30018 InParanoid:Q9BVA0 OMA:NAISRTP PhylomeDB:Q9BVA0
GenomeRNAi:10300 NextBio:39044 Bgee:Q9BVA0 CleanEx:HS_KATNB1
Genevestigator:Q9BVA0 GermOnline:ENSG00000140854 GO:GO:0031117
Uniprot:Q9BVA0
Length = 655
Score = 272 (100.8 bits), Expect = 2.2e-20, P = 2.2e-20
Identities = 94/363 (25%), Positives = 163/363 (44%)
Query: 4 YFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFSWEP 63
Y SGS+DRT++FWDLE F+++ E VR + FNPDG L G +SL+V+ WEP
Sbjct: 202 YLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLRVYGWEP 261
Query: 64 IRCHDAVDVGWSRLSDLNVHEGKLLGCSYNQSCVGVWVVDISRIEPYTIGSVTRVNGLSE 123
RC D V V W +++DL + +L+G +++QS V +VVD++R+ G+V R + + +
Sbjct: 262 ERCFDVVLVNWGKVADLAICNDQLIGVAFSQSNVSSYVVDLTRVT--RTGTVAR-DPVQD 318
Query: 124 SKSSASGNLSVLNENSAKASLGKLSVSQNSDPL-VKETKSLGRLSVSQNSDPLLKETKTL 182
+ A + N ++ + + + S P VK+ R S S D +E+
Sbjct: 319 HRPLAQ---PLPNPSAPLRRIYERPSTTCSKPQRVKQNSESERRSPSSEDDRDERES--- 372
Query: 183 GRLSVSQNSEPAKESKVLSSTGSVPGTPQRVNLNMGSKTSVVNSTAVVSKRTSTRANTAS 242
R + QN+E E + S+ TP R + + +TA + + S +
Sbjct: 373 -RAEI-QNAEDYNE--IFQPKNSISRTPPRRSEPFPAPPEDDAATAKEAAKPSPAMDVQF 428
Query: 243 NVPILNKSDIVPVIVPRTNTRFEQAVESRKDIDVIG-RTMPFSLQSKATDSRKFQNSGDE 301
VP L PV+ + E A+ + IG + F K + + D
Sbjct: 429 PVPNLEVLPRPPVVASTPAPKAEPAIIPATRNEPIGLKASDFLPAVKIPQQAELVDE-DA 487
Query: 302 VDQ--PAVSVLCENTGSKATEVSSVADRNTFAAIKGSIQG-VSVTERNSKEDIFTVSGKS 358
+ Q +C S+ + +V T IK S+ V++ + + D+ + +
Sbjct: 488 MSQIRKGHDTMCVVLTSRHKNLDTVRAVWTMGDIKTSVDSAVAINDLSVVVDLLNIVNQK 547
Query: 359 GTM 361
++
Sbjct: 548 ASL 550
Score = 189 (71.6 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 42/174 (24%), Positives = 85/174 (48%)
Query: 448 ETASVSDEDATADVMEQHSQFVSSMQSRLAKLQAVYRYWERNDVKGAISAMQKMADHTVL 507
+ A + DEDA + + + H + SR L V W D+K ++ + + D +V+
Sbjct: 478 QQAELVDEDAMSQIRKGHDTMCVVLTSRHKNLDTVRAVWTMGDIKTSVDSAVAINDLSVV 537
Query: 508 ADVMSIVVEKIEIVTLDICSCXXXXXXXXXESDMDRHLSISLDILLKLVRTFGSMIYSAI 567
D+++IV +K + LD+C+ +S + ++ L +++ F +I +
Sbjct: 538 VDLLNIVNQKASLWKLDLCTTVLPQIEKLLQSKYESYVQTGCTSLKLILQRFLPLITDML 597
Query: 568 SASTSVGVDIEAEQRIERCNRCFIELEKVKCCLPTLMRRGGSVAKSAQELNLAL 621
+A SVGVDI E+R+ +C C+ +L+ + + + G + +EL+L +
Sbjct: 598 AAPPSVGVDISREERLHKCRLCYKQLKSISGLVKSKSGLSGRHGSTFRELHLLM 651
Score = 88 (36.0 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 18/46 (39%), Positives = 24/46 (52%)
Query: 3 GYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTL 48
G F SGS D +K WD+ + + VRCL F+PDG+ L
Sbjct: 117 GEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWL 162
Score = 63 (27.2 bits), Expect = 5.7e-13, Sum P(2) = 5.7e-13
Identities = 16/55 (29%), Positives = 25/55 (45%)
Query: 8 SGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFSWE 62
S + D TVK WDL +++ T V + F+P+ L G + F W+
Sbjct: 164 SAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRF-WD 217
Score = 60 (26.2 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 12/55 (21%), Positives = 28/55 (50%)
Query: 8 SGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFSWE 62
+GS +++ WDLE +++ + + + L F+P G + G ++ + W+
Sbjct: 80 AGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDT-NIKLWD 133
Score = 47 (21.6 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 17/72 (23%), Positives = 33/72 (45%)
Query: 314 TGSKATEVS--SVADRNTFAAIKGSIQGVSVTERNSKEDIFTVSGKSGTMSMSESPASYE 371
TG V+ S+ N ++ G V N+ E++ +SG++ + + A+ +
Sbjct: 38 TGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAA-K 96
Query: 372 DERYDSLGHKSN 383
R +GHK+N
Sbjct: 97 ILR-TLMGHKAN 107
>UNIPROTKB|F1RF38 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0031117 "positive regulation of microtubule depolymerization"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA] [GO:0007026
"negative regulation of microtubule depolymerization" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0008352
"katanin complex" evidence=IEA] [GO:0008017 "microtubule binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005886 GO:GO:0005813
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
GO:GO:0008352 PANTHER:PTHR19845 OMA:NAISRTP GO:GO:0031117
EMBL:CU467555 Ensembl:ENSSSCT00000003113 Uniprot:F1RF38
Length = 521
Score = 267 (99.0 bits), Expect = 4.3e-20, P = 4.3e-20
Identities = 99/373 (26%), Positives = 167/373 (44%)
Query: 4 YFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFSWEP 63
Y SGS+DRT++FWDLE F+++ E VR + FNPDG L G +SL+V+ WEP
Sbjct: 59 YLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLRVYGWEP 118
Query: 64 IRCHDAVDVGWSRLSDLNVHEGKLLGCSYNQSCVGVWVVDISRI-EPYTIGS--VTRVNG 120
RC D V V W +++DL + +L+G +++QS V +VVD++R+ T+ V
Sbjct: 119 ERCFDVVLVNWGKVADLAICNDQLIGVAFSQSNVSSYVVDLTRVTRTGTVAQDPVQDSRP 178
Query: 121 LSESKSSASGNLSVLNENSAKASLGKLSVSQNSDPLVKETKSLGRLSVSQNSDPLLKETK 180
L++ S L + E + A V QNS+ E R S S D +E+
Sbjct: 179 LAQQPPHPSAPLRRIYERPSTACSKPQRVKQNSE---SE-----RRSPSSEDDRDERES- 229
Query: 181 TLGRLSVSQNSEPAKESKVLSSTGSVPGTPQRVNLNMGSKTSVVNSTAVVSKRTSTRANT 240
R + QN+E E + S+ TP R + + +TA + + S +
Sbjct: 230 ---RAEI-QNTEDYNE--IFQPKNSISRTPPRRSEPFPAPPEDDMATAKEAAKPSPATDV 283
Query: 241 ASNVPILNKSDI-VPVIVPRTNTRFEQAVESRKDIDVIGRTMPFSLQSKATD---SRKFQ 296
VP + S V ++P T + + +I T + KA+D + K
Sbjct: 284 QFPVPNVCPSGTGVLEVLPGPPTVVTSTPAPKAEPAIIPATRNEPIGLKASDFLPAVKIP 343
Query: 297 NSGDEVDQPAVS-------VLCENTGSKATEVSSVADRNTFAAIKGSIQG-VSVTERNSK 348
+ +D+ A+S +C S+ + +V T IK S+ V++ + +
Sbjct: 344 QQVELLDEDAMSQIRKGHDTMCVVLTSRHKNLDTVWAAWTTGDIKTSVDSAVAINDLSVV 403
Query: 349 EDIFTVSGKSGTM 361
D+ + + ++
Sbjct: 404 VDLLNIVNQKASL 416
Score = 188 (71.2 bits), Expect = 3.3e-13, Sum P(2) = 3.3e-13
Identities = 41/168 (24%), Positives = 83/168 (49%)
Query: 454 DEDATADVMEQHSQFVSSMQSRLAKLQAVYRYWERNDVKGAISAMQKMADHTVLADVMSI 513
DEDA + + + H + SR L V+ W D+K ++ + + D +V+ D+++I
Sbjct: 350 DEDAMSQIRKGHDTMCVVLTSRHKNLDTVWAAWTTGDIKTSVDSAVAINDLSVVVDLLNI 409
Query: 514 VVEKIEIVTLDICSCXXXXXXXXXESDMDRHLSISLDILLKLVRTFGSMIYSAISASTSV 573
V +K + LD+C+ +S + ++ L +++ F +I ++A SV
Sbjct: 410 VNQKASLWKLDLCTTILPQIEKLLKSKYESYVQTGCTSLKLILKRFLPLITDMLAAPPSV 469
Query: 574 GVDIEAEQRIERCNRCFIELEKVKCCLPTLMRRGGSVAKSAQELNLAL 621
GVDI E+R+ +C C+ +L+ + + + G + +EL+L +
Sbjct: 470 GVDISREERLHKCRLCYKQLKSISGFVKSKSSLSGRHGSAFRELHLLM 517
Score = 63 (27.2 bits), Expect = 3.3e-13, Sum P(2) = 3.3e-13
Identities = 16/55 (29%), Positives = 25/55 (45%)
Query: 8 SGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFSWE 62
S + D TVK WDL +++ T V + F+P+ L G + F W+
Sbjct: 21 SAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRF-WD 74
Score = 52 (23.4 bits), Expect = 4.6e-12, Sum P(2) = 4.6e-12
Identities = 9/16 (56%), Positives = 12/16 (75%)
Query: 33 TSGVRCLTFNPDGRTL 48
+ VRCL F+PDG+ L
Sbjct: 4 SQAVRCLRFSPDGKWL 19
>UNIPROTKB|A6QQU1 [details] [associations]
symbol:KATNB1 "KATNB1 protein" species:9913 "Bos taurus"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
HOGENOM:HOG000008039 GO:GO:0008352 PANTHER:PTHR19845 CTD:10300
HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP GO:GO:0031117
EMBL:DAAA02046527 EMBL:BC149991 IPI:IPI00867365
RefSeq:NP_001095379.1 UniGene:Bt.3402 Ensembl:ENSBTAT00000053556
GeneID:508813 KEGG:bta:508813 InParanoid:A6QQU1 NextBio:20868691
Uniprot:A6QQU1
Length = 663
Score = 260 (96.6 bits), Expect = 4.8e-19, P = 4.8e-19
Identities = 101/377 (26%), Positives = 169/377 (44%)
Query: 4 YFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFSWEP 63
Y SGS+DRT++FWDLE F+++ E VR + FNPDG L G +SL+V+ WEP
Sbjct: 202 YLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSILFNPDGCCLYSGCQDSLRVYGWEP 261
Query: 64 IRCHDAVDVGWSRLSDLNVHEGKLLGCSYNQSCVGVWVVDISRIEPYTIGSVTRVNGLSE 123
RC D V V W +++DL + +L+G +++QS V +VVD++R+ G+V R + + +
Sbjct: 262 ERCFDVVLVHWGKVADLAICNNQLIGVAFSQSNVSSYVVDLTRVT--RTGTVAR-DPVQD 318
Query: 124 SKSSA------SGNLSVLNENSAKASLGKLSVSQNSDPLVKETKSLGRLSVSQNSDPLLK 177
S+ S L + E + A V QNS+ E R S S D +
Sbjct: 319 SRPPTQQPPHPSAPLRRIYERPSTACSKPQRVKQNSE---SE-----RRSPSSEDDRDER 370
Query: 178 ETKTLGRLSVSQNSEPAKESKVLSSTGSVPGTPQRVNLNMGSKTSVVNSTAVVSKRTSTR 237
E+ R + QN+E E + S+ TP R + + +TA + + S
Sbjct: 371 ES----RAEI-QNAEDYNE--IFQPKNSISRTPPRRSEPFPAPPEDDMATAKEAAKPSPA 423
Query: 238 ANTASNVPIL--NKSDIVPVIVPRTNTRFEQAVESRKDIDVIGRTMPFSLQSKATD---S 292
+ VP + + + V+ A ++ I R P L KA+D +
Sbjct: 424 TDAQFPVPNICPGGAGTLEVLSRPPVVTSTPAPKAEPAIFPATRNEPIGL--KASDFLPA 481
Query: 293 RKFQNSGDEVDQPAVS-------VLCENTGSKATEVSSVADRNTFAAIKGSIQG-VSVTE 344
K + VD+ A+S +C S+ + +V T IK S+ V++ +
Sbjct: 482 VKIPQQAELVDEDAMSQIRKGHDTMCVVLTSRHKNLDTVRGVWTTGDIKTSVDSAVAIND 541
Query: 345 RNSKEDIFTVSGKSGTM 361
+ D+ + + ++
Sbjct: 542 LSVVVDLLNIVNQKASL 558
Score = 188 (71.2 bits), Expect = 1.9e-15, Sum P(2) = 1.9e-15
Identities = 42/174 (24%), Positives = 85/174 (48%)
Query: 448 ETASVSDEDATADVMEQHSQFVSSMQSRLAKLQAVYRYWERNDVKGAISAMQKMADHTVL 507
+ A + DEDA + + + H + SR L V W D+K ++ + + D +V+
Sbjct: 486 QQAELVDEDAMSQIRKGHDTMCVVLTSRHKNLDTVRGVWTTGDIKTSVDSAVAINDLSVV 545
Query: 508 ADVMSIVVEKIEIVTLDICSCXXXXXXXXXESDMDRHLSISLDILLKLVRTFGSMIYSAI 567
D+++IV +K + LD+C+ +S + ++ L +++ F +I +
Sbjct: 546 VDLLNIVNQKASLWKLDLCTTVLPQIEKLLQSKYESYVQTGCTSLKLILQRFLPLITDIL 605
Query: 568 SASTSVGVDIEAEQRIERCNRCFIELEKVKCCLPTLMRRGGSVAKSAQELNLAL 621
+A SVGVDI E+R+ +C C+ +L+ + + + G + +EL+L +
Sbjct: 606 AAPPSVGVDISREERLHKCRLCYKQLKSISNLVKSKSGLSGRHGSAFRELHLLM 659
Score = 88 (36.0 bits), Expect = 1.9e-15, Sum P(2) = 1.9e-15
Identities = 18/46 (39%), Positives = 24/46 (52%)
Query: 3 GYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTL 48
G F SGS D +K WD+ + + VRCL F+PDG+ L
Sbjct: 117 GEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWL 162
Score = 63 (27.2 bits), Expect = 7.6e-13, Sum P(2) = 7.6e-13
Identities = 16/55 (29%), Positives = 25/55 (45%)
Query: 8 SGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFSWE 62
S + D TVK WDL +++ T V + F+P+ L G + F W+
Sbjct: 164 SAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRF-WD 217
Score = 60 (26.2 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 12/55 (21%), Positives = 28/55 (50%)
Query: 8 SGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFSWE 62
+GS +++ WDLE +++ + + + L F+P G + G ++ + W+
Sbjct: 80 AGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDT-NIKLWD 133
Score = 47 (21.6 bits), Expect = 3.5e-11, Sum P(2) = 3.5e-11
Identities = 17/72 (23%), Positives = 33/72 (45%)
Query: 314 TGSKATEVS--SVADRNTFAAIKGSIQGVSVTERNSKEDIFTVSGKSGTMSMSESPASYE 371
TG V+ S+ N ++ G V N+ E++ +SG++ + + A+ +
Sbjct: 38 TGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAA-K 96
Query: 372 DERYDSLGHKSN 383
R +GHK+N
Sbjct: 97 ILR-TLMGHKAN 107
>UNIPROTKB|F6UQ08 [details] [associations]
symbol:F6UQ08 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AAEX03001568 Ensembl:ENSCAFT00000013754 OMA:NTEEYNE
Uniprot:F6UQ08
Length = 581
Score = 184 (69.8 bits), Expect = 3.5e-15, Sum P(2) = 3.5e-15
Identities = 59/185 (31%), Positives = 89/185 (48%)
Query: 31 PETSGVRCLTFNPDGRTLLCGLHESLKVFSWEPIRCHDAVDVGWSRLSDLNVHEGKLLGC 90
P + R + FNPDG L G +SL+V+ WEP RC D V V W +++DL V +L+G
Sbjct: 285 PHSRLPRSVLFNPDGCCLYSGCQDSLRVYGWEPERCFDVVLVSWGKVADLAVCNDQLIGV 344
Query: 91 SYNQSCVGVWVVDISRI-EPYTIGS--VTRVNGLSESKSSASGNLSVLNENSAKASLGKL 147
+++QS V +VVD++R+ T+ V L++ + S L + E + A
Sbjct: 345 AFSQSNVSSYVVDLTRVTRTGTVAQDPVQDSRPLAQQPAHPSAPLRRIYERPSTACNKPQ 404
Query: 148 SVSQNSDPLVKETKSLGRLSVSQNSDPLLKETKTLGRLSVSQNSEPAKESKVLSSTGSVP 207
V QNS+ E R S S D +E+ R + QN+E E + S+
Sbjct: 405 RVKQNSE---SE-----RRSPSSEDDRDERES----RAEI-QNTEEYNE--IFQPKNSIS 449
Query: 208 GTPQR 212
TP R
Sbjct: 450 RTPPR 454
Score = 88 (36.0 bits), Expect = 3.5e-15, Sum P(2) = 3.5e-15
Identities = 18/46 (39%), Positives = 24/46 (52%)
Query: 3 GYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTL 48
G F SGS D +K WD+ + + VRCL F+PDG+ L
Sbjct: 117 GEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWL 162
>FB|FBgn0040207 [details] [associations]
symbol:kat80 "katanin 80" species:7227 "Drosophila
melanogaster" [GO:0008352 "katanin complex" evidence=ISS;NAS]
[GO:0051013 "microtubule severing" evidence=ISS;NAS] [GO:0007017
"microtubule-based process" evidence=ISS] [GO:0008017 "microtubule
binding" evidence=IEA;ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008017 GO:GO:0051013 HSSP:P16649
GO:GO:0008352 PANTHER:PTHR19845 FlyBase:FBgn0040207 EMBL:AF223065
ProteinModelPortal:Q9NHF0 PRIDE:Q9NHF0 InParanoid:Q9NHF0
ArrayExpress:Q9NHF0 Bgee:Q9NHF0 Uniprot:Q9NHF0
Length = 823
Score = 146 (56.5 bits), Expect = 4.8e-12, Sum P(2) = 4.8e-12
Identities = 33/105 (31%), Positives = 52/105 (49%)
Query: 8 SGSADRTVKFWDLETFELIGSAGP-ETSGVRCLTFNPDGRTLLCGLHESLKVFSWEPIRC 66
+G D TV +DLE +L+ +RC+TF+ +G L G + V WEP R
Sbjct: 206 AGRVDGTVSIYDLEHQQLVSQTTHFYGQAIRCITFSDNGECLFVGSSSGISVIGWEPDRE 265
Query: 67 HDAVDVGWSRLSDLNVHEGKLL-GCSYNQSCVGVWVVDISRIEPY 110
D + WS L+D+ V KL+ GC + V + + + R+ P+
Sbjct: 266 LDHIKSTWSFLADMKVVNNKLICGC-HEIDTVSINTISLDRVIPF 309
Score = 102 (41.0 bits), Expect = 4.8e-12, Sum P(2) = 4.8e-12
Identities = 34/161 (21%), Positives = 68/161 (42%)
Query: 455 EDATADVMEQ-HSQFVSSMQSRLAKLQAVYRYWERNDVKGAISAMQKMADHTVLADVMSI 513
+D D++ + H + + +R + L + +DV GA+ + ++ D++
Sbjct: 658 DDHDFDMLSRSHEAVLQELSNRQSSLDLLRHATRSHDVLGALR-QARSCGKSIFIDLLGA 716
Query: 514 VVEKIEIVTLDICSCXXXXXXXXXESDMDRHLSISLDILLKLVRTFGSMIYSAIS--AST 571
++EK LD C +S H + + D L ++ F I + A+
Sbjct: 717 ILEKPSSWNLDFCMFVLPEIYELLQSQHKFHFTRACDTLRIILSNFLPTIQENLDSWAAN 776
Query: 572 SVGVDIEAEQRIERCNRCFIELEKVKCCLPTLMRRGGSVAK 612
+GVD+ E R +C C L ++K LP G ++++
Sbjct: 777 GLGVDVTREDRQRKCAECQRWLLQIKN-LPESTHFGSTLSQ 816
Score = 73 (30.8 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 21/63 (33%), Positives = 31/63 (49%)
Query: 2 SGYFHFSGSADRTVKFWDLETFE-LIGSAGPETSGVRCLTFNPDGRTLL-CGLHESLKVF 59
SG + SGS D TV+ WD++ I S V + F+PDG + GL S+ +
Sbjct: 113 SGEYVVSGSNDTTVRLWDVQNENNCIKVCRGHMSHVNSVKFSPDGLWIASAGLEGSILI- 171
Query: 60 SWE 62
W+
Sbjct: 172 -WD 173
>UNIPROTKB|J9P0X5 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR026962
GO:GO:0051013 GeneTree:ENSGT00700000104017 GO:GO:0008352
PANTHER:PTHR19845 EMBL:AAEX03001165 Ensembl:ENSCAFT00000044294
OMA:INSKYET Uniprot:J9P0X5
Length = 168
Score = 166 (63.5 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 37/157 (23%), Positives = 76/157 (48%)
Query: 465 HSQFVSSMQSRLAKLQAVYRYWERNDVKGAISAMQKMADHTVLADVMSIVVEKIEIVTLD 524
H + SR L V W D+K ++ + + D +V+ D+++IV +K + LD
Sbjct: 8 HDTMCVVLTSRHKNLDTVRALWTTGDIKTSVDSAVAINDLSVVVDLLNIVNQKASLWKLD 67
Query: 525 ICSCXXXXXXXXXESDMDRHLSISLDILLKLVRTFGSMIYSAISASTSVGVDIEAEQRIE 584
+C+ +S + ++ L +++ F +I ++A+ SVGVDI E+R+
Sbjct: 68 LCTTVLPQIEKLLQSKYESYVQTGCTSLKLILQRFLPLITDILAAAPSVGVDISREERLH 127
Query: 585 RCNRCFIELEKVKCCLPTLMRRGGSVAKSAQELNLAL 621
+C C+ +L+ + + + G + +EL+L +
Sbjct: 128 KCRLCYKQLKSISGLVKSKSSLSGRHGSAFRELHLLM 164
>CGD|CAL0003874 [details] [associations]
symbol:PGA55 species:5476 "Candida albicans" [GO:0009986
"cell surface" evidence=ISS] [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
CGD:CAL0003874 GO:GO:0009986 EMBL:AACQ01000152 RefSeq:XP_712591.1
GeneID:3645784 KEGG:cal:CaO19.207 Uniprot:Q59SG9
Length = 1404
Score = 151 (58.2 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 73/365 (20%), Positives = 153/365 (41%)
Query: 122 SESKSSASGNLSVLNENSAKASLGKLSVSQNSDPLVKETKSLGRLS-VSQNSDPLLKETK 180
S S+ S+S +S +E S+ + + S +S +V + + S V +S + ++
Sbjct: 409 SSSEVSSSSEVSSSSEVSSSSEVSSSSQVISSSEVVSSSSEVSSSSEVVSSSSEVSSSSE 468
Query: 181 TLGRLSVSQNSEPAKESKVLSSTGSVPGTPQRV---NLNMGSKTSVVNSTAVVSKRT--S 235
VS +S+ S+++SS+ V + V + + S + VV+S++ VS + S
Sbjct: 469 VSSSSEVSSSSQVTSSSEIVSSSSEVSSSSSEVVSSSSEVSSSSEVVSSSSEVSSSSEVS 528
Query: 236 TRANTASNVPILNKSDIVPVIVPRTNTRFEQAVESRKDI----DVIGRTMPFSLQSKATD 291
+ + +S+ +++ S+IV ++ + V S ++ +V+ + S S+ +
Sbjct: 529 SSSEVSSSSQVISSSEIVSSS-SEVSSSSSEVVSSSSEVSSSSEVVSSSSEVSSSSEVSS 587
Query: 292 SRKFQNSGDEVDQPAVSVLCENTGSKATEVSSVADRNTFAAIKGSIQGVSVTERNSKEDI 351
S + +S + V S ++EVSS ++ ++ + + S + S +E +S
Sbjct: 588 SSEVSSSSQVISSSEVVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSEVSSSSEVSSSSQ- 646
Query: 352 FTVSGKSGTMSMSESPASYEDERYDSLGHKSNRDGYAMESQKRGRMHSLVINWEKRGSSP 411
V+ S +S S +S E S S+ + S S V + + SS
Sbjct: 647 --VTSSSEIVSSSSEVSSSSSEVVSSSSEVSS-SSEVVSSSSEVSSSSEVSSSSEVSSSS 703
Query: 412 NYDGPXXXXXXXXXXXXXMPPFNAFKQRGYSS--SAEKETASVSDEDATADVMEQHSQFV 469
++ + SS S+ E +S S+ ++++V S+ +
Sbjct: 704 QVISSSEVVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSEVSSSSEVSSSSEVTSSSSEII 763
Query: 470 SSMQS 474
SS S
Sbjct: 764 SSSSS 768
Score = 137 (53.3 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 74/371 (19%), Positives = 156/371 (42%)
Query: 112 IGSVTRVNGLSE--SKSSASGNLSVLNENSAKASLGKLSVSQNSDPLVKETKSLGRLSVS 169
+ S + V+ SE S S S + V++ + +S + VS +S +V + VS
Sbjct: 515 VSSSSEVSSSSEVSSSSEVSSSSQVISSSEIVSSSSE--VSSSSSEVVSSSSE-----VS 567
Query: 170 QNSDPLLKETKTLGRLSVSQNSEPAKESKVLSSTGSVPGTPQRVNLNMG-SKTSVVNSTA 228
+S+ + ++ VS +SE + S+V+SS+ V + + V+ + S +S V+S++
Sbjct: 568 SSSEVVSSSSEVSSSSEVSSSSEVSSSSQVISSSEVVSSSSEVVSSSSEVSSSSEVSSSS 627
Query: 229 VVSKRT--STRANTASNVPILNKSDIVPVIVPRTNTRFEQAVESRKDI----DVIGRTMP 282
VS + S+ + +S+ + + S+IV ++ + V S ++ +V+ +
Sbjct: 628 EVSSSSEVSSSSEVSSSSQVTSSSEIVSSS-SEVSSSSSEVVSSSSEVSSSSEVVSSSSE 686
Query: 283 FSLQSKATDSRKFQNSGDEVDQPAVSVLCENTGSKATEVSSVADRNTFAAIKGSIQGVSV 342
S S+ + S + +S + V S ++EVSS ++ ++ + + S + S
Sbjct: 687 VSSSSEVSSSSEVSSSSQVISSSEVVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSEVSSS 746
Query: 343 TERNSKEDIFTVSGKSGTMSMSESPASYEDERYDSLGHKSNRDGYAMESQKRGRMHSLVI 402
+E +S ++ T S S S S + E S S+ S K +
Sbjct: 747 SEVSSSSEV-TSSSSEIISSSSSSEVTSSSEVSSSSQATSSSSEIISSSSKVSSSSEITS 805
Query: 403 NWEKRGSSPNYDGPXXXXXXXXXXXXXMPPFNAFKQRGYSSSAEKETASVSDEDATADVM 462
+ E S+ + + + SSS+E ++S ++ + +
Sbjct: 806 SSECISSTSEVNSSSSEVVSSSSASSEVVSSST---ECISSSSEAISSSSQVTSSSTECI 862
Query: 463 EQHSQFVSSMQ 473
S+ +SS +
Sbjct: 863 SSSSEVISSSE 873
Score = 137 (53.3 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 85/420 (20%), Positives = 174/420 (41%)
Query: 112 IGSVTRVNGLSESKSSASGNLSVLNE---NSAKASLGKLSVSQNSDPLVKETKSLGRLSV 168
+ S ++V+ SE+ SS+S +S +E +S++ + VS +S+ + ++ V
Sbjct: 156 VSSSSKVSSSSEATSSSSEIISSSSEVVSSSSQVTSSSEVVSSSSEVVSSSSEVSSSSEV 215
Query: 169 SQNSDPLLKETKTLGRLSVSQNSEPAKESKVLSSTGSVPGTPQRVNLNMGSKTSVVNSTA 228
+S + ++ VS +S+ S+++SS+ V + V + S + V +S+
Sbjct: 216 VSSSSEVSSSSEVSSSSEVSSSSQVTSSSEIVSSSSEVSSSSSEV---VSSSSEVSSSSE 272
Query: 229 VVSKRTSTRANTASNVPILNKSDIVPVIVPRTNTRFEQAVESRKDIDVIGRTMPFSLQSK 288
VVS +S+ +++S V + S++ +++ + E VI + S S+
Sbjct: 273 VVS--SSSEVSSSSEVS--SSSEV------SSSSEVSSSSEVSSSSQVISSSEVVSSSSE 322
Query: 289 ATDSRKFQNSGDEVDQPAVSVLCENTGSKATEVSSVADRNTFAAIKGSIQGVSVTERNSK 348
S +S EV + V + S ++EVSS ++ ++ + + S + VS + S
Sbjct: 323 VVSSSSEVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVTSSSEIVSSSSEVSS 382
Query: 349 EDIFTVSGKSGTMSMSESPASYEDERYDSLGHKSNRDGYAME--SQKRGRMHSLVINWEK 406
VS S S SE +S + S S+ + E S S VI+ +
Sbjct: 383 SSSEVVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSEVSSSSEVSSSSQVISSSE 442
Query: 407 RGSSPNYDGPXXXXXXXXXXXXXMPPFNAFKQRGYSS--SAEKETASVSDE--DATADVM 462
SS + ++ + SS ++ E S S E ++++V+
Sbjct: 443 VVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVTSSSEIVSSSSEVSSSSSEVV 502
Query: 463 EQHSQFVSSMQSRLAKLQAVYRYWERNDVKGAISAMQKMADHTVLADVMSIVVEKIEIVT 522
S+ VSS ++ V E + S+ Q ++ +++ + E+V+
Sbjct: 503 SSSSE-VSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVISSSEIVSSSSEVSSSSSEVVS 561
Score = 126 (49.4 bits), Expect = 0.00052, P = 0.00052
Identities = 84/424 (19%), Positives = 175/424 (41%)
Query: 112 IGSVTRVNGLSESKSSAS--GNLSVLNENSAKASLGKLSVSQNSDPLVKETKSLGRLSVS 169
+ S + V+ SE SS+ + V++ +S +S ++ S + E S +S S
Sbjct: 419 VSSSSEVSSSSEVSSSSQVISSSEVVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSS 478
Query: 170 Q---NSDPLLKETKTLGRLS---VSQNSEPAKESKVLSSTGSVPGTPQ-RVNLNMGSKTS 222
+S ++ + + S VS +SE + S+V+SS+ V + + + + S +
Sbjct: 479 SQVTSSSEIVSSSSEVSSSSSEVVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQ 538
Query: 223 VVNSTAVVSKRTSTRANTASNVPILNKSDIVPVI-VPRTNTRFEQAVESRKDIDVIGRTM 281
V++S+ +VS +S+ +++S+ + + S++ V +++ + E +V +
Sbjct: 539 VISSSEIVS--SSSEVSSSSSEVVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQ 596
Query: 282 PFSLQSKATDSRKFQNSGDEVDQPAVSVLCENTGSKATEVSSVADRNTFAAIKGSIQGVS 341
S + S + +S EV + V + S ++EVSS ++ ++ + + S + VS
Sbjct: 597 VISSSEVVSSSSEVVSSSSEVSSSS-EVSSSSEVSSSSEVSSSSEVSSSSQVTSSSEIVS 655
Query: 342 VTERNSKEDIFTVSGKSGTMSMSESPASYEDERYDSLGHKSNR---DGYAMESQKRGRMH 398
+ S VS S S SE +S + S S+ + S +
Sbjct: 656 SSSEVSSSSSEVVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVISSSEVVSSS 715
Query: 399 SLVINWEKRGSSPNYDGPXXXXXXXXXXXXXMPPFNAFKQRGYSSSAEKETASVSDEDAT 458
S V++ SS + ++ + SSS+E ++S S E +
Sbjct: 716 SEVVSSSSEVSSSSEVSSSSEVSSSSEVSSSSEVSSSSEVT--SSSSEIISSSSSSEVTS 773
Query: 459 ADVMEQHSQFVSSMQSRLAKLQAVYRYWERNDVKGAISAMQKMADHTVLADVMSIVVEKI 518
+ + SQ SS ++ V E IS+ ++ + ++V+S
Sbjct: 774 SSEVSSSSQATSSSSEIISSSSKVSSSSEITSSSECISSTSEVNSSS--SEVVSSSSASS 831
Query: 519 EIVT 522
E+V+
Sbjct: 832 EVVS 835
Score = 125 (49.1 bits), Expect = 0.00067, P = 0.00067
Identities = 79/375 (21%), Positives = 157/375 (41%)
Query: 112 IGSVTRVNGLSESKSSASGNLSVLNENSAKASLGKLSVSQNSDPLVKETKSLGRLS-VSQ 170
+ S + V+ SE SS+ + S +S++ VS +S +V + + S V
Sbjct: 343 VSSSSEVSSSSEVSSSSEVSSSSQVTSSSEIVSSSSEVSSSSSEVVSSSSEVSSSSEVVS 402
Query: 171 NSDPLLKETKTLGRLSVSQNSEPAKESKVLSSTGSVPGTPQRVNLN--MGSKTSVVNSTA 228
+S + ++ VS +SE + S+V SS+ V + + V+ + + S + VV+S++
Sbjct: 403 SSSEVSSSSEVSSSSEVSSSSEVSSSSEV-SSSSQVISSSEVVSSSSEVSSSSEVVSSSS 461
Query: 229 VVSKRT--STRANTASNVPILNKSDIVPVIVPRTNTRFEQAVESRKDI----DVIGRTMP 282
VS + S+ + +S+ + + S+IV ++ + V S ++ +V+ +
Sbjct: 462 EVSSSSEVSSSSEVSSSSQVTSSSEIVSSS-SEVSSSSSEVVSSSSEVSSSSEVVSSSSE 520
Query: 283 FSLQSKATDSRKFQNSGDEVDQPA-VSVLCENTGSKATEVSSVADRNTFAAIKGSIQGVS 341
S S+ + S + +S + VS E + S + VSS ++ ++ + + S VS
Sbjct: 521 VSSSSEVSSSSEVSSSSQVISSSEIVSSSSEVSSSSSEVVSSSSEVSSSSEVVSSSSEVS 580
Query: 342 VTERNSKEDIFTVSGKSGTMSMSESPASYEDERYDSLGHKSNRDGYAMESQKRGRMHSLV 401
+ S VS S +S SE +S E S S+ + S+ +
Sbjct: 581 SSSEVSSSS--EVSSSSQVISSSEVVSS-SSEVVSSSSEVSSSSEVSSSSEVSSSSE-VS 636
Query: 402 INWEKRGSSPNYDGPXXXXXXXXXXXXXMPPFNAFKQRGYSS---SAEKETASVSDEDAT 458
+ E SS ++ + SS S+ E +S S+ ++
Sbjct: 637 SSSEVSSSSQVTSSSEIVSSSSEVSSSSSEVVSSSSEVSSSSEVVSSSSEVSSSSEVSSS 696
Query: 459 ADVMEQHSQFVSSMQ 473
++V SQ +SS +
Sbjct: 697 SEVSSS-SQVISSSE 710
>UNIPROTKB|Q59SG9 [details] [associations]
symbol:PGA55 "Flocculin-like protein" species:237561
"Candida albicans SC5314" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0009986 "cell surface" evidence=ISS] CGD:CAL0003874
GO:GO:0009986 EMBL:AACQ01000152 RefSeq:XP_712591.1 GeneID:3645784
KEGG:cal:CaO19.207 Uniprot:Q59SG9
Length = 1404
Score = 151 (58.2 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 73/365 (20%), Positives = 153/365 (41%)
Query: 122 SESKSSASGNLSVLNENSAKASLGKLSVSQNSDPLVKETKSLGRLS-VSQNSDPLLKETK 180
S S+ S+S +S +E S+ + + S +S +V + + S V +S + ++
Sbjct: 409 SSSEVSSSSEVSSSSEVSSSSEVSSSSQVISSSEVVSSSSEVSSSSEVVSSSSEVSSSSE 468
Query: 181 TLGRLSVSQNSEPAKESKVLSSTGSVPGTPQRV---NLNMGSKTSVVNSTAVVSKRT--S 235
VS +S+ S+++SS+ V + V + + S + VV+S++ VS + S
Sbjct: 469 VSSSSEVSSSSQVTSSSEIVSSSSEVSSSSSEVVSSSSEVSSSSEVVSSSSEVSSSSEVS 528
Query: 236 TRANTASNVPILNKSDIVPVIVPRTNTRFEQAVESRKDI----DVIGRTMPFSLQSKATD 291
+ + +S+ +++ S+IV ++ + V S ++ +V+ + S S+ +
Sbjct: 529 SSSEVSSSSQVISSSEIVSSS-SEVSSSSSEVVSSSSEVSSSSEVVSSSSEVSSSSEVSS 587
Query: 292 SRKFQNSGDEVDQPAVSVLCENTGSKATEVSSVADRNTFAAIKGSIQGVSVTERNSKEDI 351
S + +S + V S ++EVSS ++ ++ + + S + S +E +S
Sbjct: 588 SSEVSSSSQVISSSEVVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSEVSSSSEVSSSSQ- 646
Query: 352 FTVSGKSGTMSMSESPASYEDERYDSLGHKSNRDGYAMESQKRGRMHSLVINWEKRGSSP 411
V+ S +S S +S E S S+ + S S V + + SS
Sbjct: 647 --VTSSSEIVSSSSEVSSSSSEVVSSSSEVSS-SSEVVSSSSEVSSSSEVSSSSEVSSSS 703
Query: 412 NYDGPXXXXXXXXXXXXXMPPFNAFKQRGYSS--SAEKETASVSDEDATADVMEQHSQFV 469
++ + SS S+ E +S S+ ++++V S+ +
Sbjct: 704 QVISSSEVVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSEVSSSSEVSSSSEVTSSSSEII 763
Query: 470 SSMQS 474
SS S
Sbjct: 764 SSSSS 768
Score = 137 (53.3 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 74/371 (19%), Positives = 156/371 (42%)
Query: 112 IGSVTRVNGLSE--SKSSASGNLSVLNENSAKASLGKLSVSQNSDPLVKETKSLGRLSVS 169
+ S + V+ SE S S S + V++ + +S + VS +S +V + VS
Sbjct: 515 VSSSSEVSSSSEVSSSSEVSSSSQVISSSEIVSSSSE--VSSSSSEVVSSSSE-----VS 567
Query: 170 QNSDPLLKETKTLGRLSVSQNSEPAKESKVLSSTGSVPGTPQRVNLNMG-SKTSVVNSTA 228
+S+ + ++ VS +SE + S+V+SS+ V + + V+ + S +S V+S++
Sbjct: 568 SSSEVVSSSSEVSSSSEVSSSSEVSSSSQVISSSEVVSSSSEVVSSSSEVSSSSEVSSSS 627
Query: 229 VVSKRT--STRANTASNVPILNKSDIVPVIVPRTNTRFEQAVESRKDI----DVIGRTMP 282
VS + S+ + +S+ + + S+IV ++ + V S ++ +V+ +
Sbjct: 628 EVSSSSEVSSSSEVSSSSQVTSSSEIVSSS-SEVSSSSSEVVSSSSEVSSSSEVVSSSSE 686
Query: 283 FSLQSKATDSRKFQNSGDEVDQPAVSVLCENTGSKATEVSSVADRNTFAAIKGSIQGVSV 342
S S+ + S + +S + V S ++EVSS ++ ++ + + S + S
Sbjct: 687 VSSSSEVSSSSEVSSSSQVISSSEVVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSEVSSS 746
Query: 343 TERNSKEDIFTVSGKSGTMSMSESPASYEDERYDSLGHKSNRDGYAMESQKRGRMHSLVI 402
+E +S ++ T S S S S + E S S+ S K +
Sbjct: 747 SEVSSSSEV-TSSSSEIISSSSSSEVTSSSEVSSSSQATSSSSEIISSSSKVSSSSEITS 805
Query: 403 NWEKRGSSPNYDGPXXXXXXXXXXXXXMPPFNAFKQRGYSSSAEKETASVSDEDATADVM 462
+ E S+ + + + SSS+E ++S ++ + +
Sbjct: 806 SSECISSTSEVNSSSSEVVSSSSASSEVVSSST---ECISSSSEAISSSSQVTSSSTECI 862
Query: 463 EQHSQFVSSMQ 473
S+ +SS +
Sbjct: 863 SSSSEVISSSE 873
Score = 137 (53.3 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 85/420 (20%), Positives = 174/420 (41%)
Query: 112 IGSVTRVNGLSESKSSASGNLSVLNE---NSAKASLGKLSVSQNSDPLVKETKSLGRLSV 168
+ S ++V+ SE+ SS+S +S +E +S++ + VS +S+ + ++ V
Sbjct: 156 VSSSSKVSSSSEATSSSSEIISSSSEVVSSSSQVTSSSEVVSSSSEVVSSSSEVSSSSEV 215
Query: 169 SQNSDPLLKETKTLGRLSVSQNSEPAKESKVLSSTGSVPGTPQRVNLNMGSKTSVVNSTA 228
+S + ++ VS +S+ S+++SS+ V + V + S + V +S+
Sbjct: 216 VSSSSEVSSSSEVSSSSEVSSSSQVTSSSEIVSSSSEVSSSSSEV---VSSSSEVSSSSE 272
Query: 229 VVSKRTSTRANTASNVPILNKSDIVPVIVPRTNTRFEQAVESRKDIDVIGRTMPFSLQSK 288
VVS +S+ +++S V + S++ +++ + E VI + S S+
Sbjct: 273 VVS--SSSEVSSSSEVS--SSSEV------SSSSEVSSSSEVSSSSQVISSSEVVSSSSE 322
Query: 289 ATDSRKFQNSGDEVDQPAVSVLCENTGSKATEVSSVADRNTFAAIKGSIQGVSVTERNSK 348
S +S EV + V + S ++EVSS ++ ++ + + S + VS + S
Sbjct: 323 VVSSSSEVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVTSSSEIVSSSSEVSS 382
Query: 349 EDIFTVSGKSGTMSMSESPASYEDERYDSLGHKSNRDGYAME--SQKRGRMHSLVINWEK 406
VS S S SE +S + S S+ + E S S VI+ +
Sbjct: 383 SSSEVVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSEVSSSSEVSSSSQVISSSE 442
Query: 407 RGSSPNYDGPXXXXXXXXXXXXXMPPFNAFKQRGYSS--SAEKETASVSDE--DATADVM 462
SS + ++ + SS ++ E S S E ++++V+
Sbjct: 443 VVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVTSSSEIVSSSSEVSSSSSEVV 502
Query: 463 EQHSQFVSSMQSRLAKLQAVYRYWERNDVKGAISAMQKMADHTVLADVMSIVVEKIEIVT 522
S+ VSS ++ V E + S+ Q ++ +++ + E+V+
Sbjct: 503 SSSSE-VSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVISSSEIVSSSSEVSSSSSEVVS 561
Score = 126 (49.4 bits), Expect = 0.00052, P = 0.00052
Identities = 84/424 (19%), Positives = 175/424 (41%)
Query: 112 IGSVTRVNGLSESKSSAS--GNLSVLNENSAKASLGKLSVSQNSDPLVKETKSLGRLSVS 169
+ S + V+ SE SS+ + V++ +S +S ++ S + E S +S S
Sbjct: 419 VSSSSEVSSSSEVSSSSQVISSSEVVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSS 478
Query: 170 Q---NSDPLLKETKTLGRLS---VSQNSEPAKESKVLSSTGSVPGTPQ-RVNLNMGSKTS 222
+S ++ + + S VS +SE + S+V+SS+ V + + + + S +
Sbjct: 479 SQVTSSSEIVSSSSEVSSSSSEVVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQ 538
Query: 223 VVNSTAVVSKRTSTRANTASNVPILNKSDIVPVI-VPRTNTRFEQAVESRKDIDVIGRTM 281
V++S+ +VS +S+ +++S+ + + S++ V +++ + E +V +
Sbjct: 539 VISSSEIVS--SSSEVSSSSSEVVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQ 596
Query: 282 PFSLQSKATDSRKFQNSGDEVDQPAVSVLCENTGSKATEVSSVADRNTFAAIKGSIQGVS 341
S + S + +S EV + V + S ++EVSS ++ ++ + + S + VS
Sbjct: 597 VISSSEVVSSSSEVVSSSSEVSSSS-EVSSSSEVSSSSEVSSSSEVSSSSQVTSSSEIVS 655
Query: 342 VTERNSKEDIFTVSGKSGTMSMSESPASYEDERYDSLGHKSNR---DGYAMESQKRGRMH 398
+ S VS S S SE +S + S S+ + S +
Sbjct: 656 SSSEVSSSSSEVVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVISSSEVVSSS 715
Query: 399 SLVINWEKRGSSPNYDGPXXXXXXXXXXXXXMPPFNAFKQRGYSSSAEKETASVSDEDAT 458
S V++ SS + ++ + SSS+E ++S S E +
Sbjct: 716 SEVVSSSSEVSSSSEVSSSSEVSSSSEVSSSSEVSSSSEVT--SSSSEIISSSSSSEVTS 773
Query: 459 ADVMEQHSQFVSSMQSRLAKLQAVYRYWERNDVKGAISAMQKMADHTVLADVMSIVVEKI 518
+ + SQ SS ++ V E IS+ ++ + ++V+S
Sbjct: 774 SSEVSSSSQATSSSSEIISSSSKVSSSSEITSSSECISSTSEVNSSS--SEVVSSSSASS 831
Query: 519 EIVT 522
E+V+
Sbjct: 832 EVVS 835
Score = 125 (49.1 bits), Expect = 0.00067, P = 0.00067
Identities = 79/375 (21%), Positives = 157/375 (41%)
Query: 112 IGSVTRVNGLSESKSSASGNLSVLNENSAKASLGKLSVSQNSDPLVKETKSLGRLS-VSQ 170
+ S + V+ SE SS+ + S +S++ VS +S +V + + S V
Sbjct: 343 VSSSSEVSSSSEVSSSSEVSSSSQVTSSSEIVSSSSEVSSSSSEVVSSSSEVSSSSEVVS 402
Query: 171 NSDPLLKETKTLGRLSVSQNSEPAKESKVLSSTGSVPGTPQRVNLN--MGSKTSVVNSTA 228
+S + ++ VS +SE + S+V SS+ V + + V+ + + S + VV+S++
Sbjct: 403 SSSEVSSSSEVSSSSEVSSSSEVSSSSEV-SSSSQVISSSEVVSSSSEVSSSSEVVSSSS 461
Query: 229 VVSKRT--STRANTASNVPILNKSDIVPVIVPRTNTRFEQAVESRKDI----DVIGRTMP 282
VS + S+ + +S+ + + S+IV ++ + V S ++ +V+ +
Sbjct: 462 EVSSSSEVSSSSEVSSSSQVTSSSEIVSSS-SEVSSSSSEVVSSSSEVSSSSEVVSSSSE 520
Query: 283 FSLQSKATDSRKFQNSGDEVDQPA-VSVLCENTGSKATEVSSVADRNTFAAIKGSIQGVS 341
S S+ + S + +S + VS E + S + VSS ++ ++ + + S VS
Sbjct: 521 VSSSSEVSSSSEVSSSSQVISSSEIVSSSSEVSSSSSEVVSSSSEVSSSSEVVSSSSEVS 580
Query: 342 VTERNSKEDIFTVSGKSGTMSMSESPASYEDERYDSLGHKSNRDGYAMESQKRGRMHSLV 401
+ S VS S +S SE +S E S S+ + S+ +
Sbjct: 581 SSSEVSSSS--EVSSSSQVISSSEVVSS-SSEVVSSSSEVSSSSEVSSSSEVSSSSE-VS 636
Query: 402 INWEKRGSSPNYDGPXXXXXXXXXXXXXMPPFNAFKQRGYSS---SAEKETASVSDEDAT 458
+ E SS ++ + SS S+ E +S S+ ++
Sbjct: 637 SSSEVSSSSQVTSSSEIVSSSSEVSSSSSEVVSSSSEVSSSSEVVSSSSEVSSSSEVSSS 696
Query: 459 ADVMEQHSQFVSSMQ 473
++V SQ +SS +
Sbjct: 697 SEVSSS-SQVISSSE 710
>UNIPROTKB|H3BTU7 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR026962
GO:GO:0051013 EMBL:AC018552 EMBL:AC092118 GO:GO:0008352
PANTHER:PTHR19845 HGNC:HGNC:6217 Ensembl:ENST00000563462
Uniprot:H3BTU7
Length = 276
Score = 123 (48.4 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 25/94 (26%), Positives = 51/94 (54%)
Query: 503 DHTVLADVMSIVVEKIEIVTLDICSCXXXXXXXXXESDMDRHLSISLDILLKLVRTFGSM 562
D +V+ D+++IV +K + LD+C+ +S + ++ L +++ F +
Sbjct: 179 DLSVVVDLLNIVNQKASLWKLDLCTTVLPQIEKLLQSKYESYVQTGCTSLKLILQRFLPL 238
Query: 563 IYSAISASTSVGVDIEAEQRIERCNRCFIELEKV 596
I ++A SVGVDI E+R+ +C C+ +L+ +
Sbjct: 239 ITDMLAAPPSVGVDISREERLHKCRLCYKQLKSI 272
>UNIPROTKB|Q5RD06 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9601 "Pongo abelii" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0042384
"cilium assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
HOVERGEN:HBG057502 KO:K16482 CTD:282809 EMBL:CR858112
RefSeq:NP_001125169.1 UniGene:Pab.14153 ProteinModelPortal:Q5RD06
GeneID:100172056 KEGG:pon:100172056 Uniprot:Q5RD06
Length = 451
Score = 119 (46.9 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 39/145 (26%), Positives = 71/145 (48%)
Query: 3 GYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLL-CGLHESLKVFSW 61
G F + S D+++K W + + S T VRC F+PDGR ++ C +++K++
Sbjct: 114 GQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDT 173
Query: 62 EPIRC-HDAVD-VGWSRLSDLNVHEGKLLGCSYNQSCVGVWVVDISRI-EPYTIGSVTRV 118
+C ++ D VG++ D N G + + + V VW V ++++ + Y + S V
Sbjct: 174 TNKQCVNNFSDSVGFANFVDFNP-SGTCIASAGSDQTVKVWDVRVNKLLQHYQVHS-GGV 231
Query: 119 NGLSESKS-------SASGNLSVLN 136
N +S S S+ G L +L+
Sbjct: 232 NCISFHPSDNYLVTASSDGTLKILD 256
Score = 50 (22.7 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 256 IVPRTNTRFEQAVESRKDIDVIGRTMP 282
I PRT E+ VE+ + + GRT+P
Sbjct: 328 IYPRTPHPHEEKVETVETTETSGRTLP 354
>POMBASE|SPBC215.13 [details] [associations]
symbol:SPBC215.13 "sequence orphan" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0009986 "cell surface"
evidence=NAS] [GO:0031225 "anchored to membrane" evidence=IEA]
PomBase:SPBC215.13 GO:GO:0005783 GO:GO:0005886 GO:GO:0009986
GO:GO:0031225 EMBL:CU329671 PIR:T39903 RefSeq:NP_596690.1
ProteinModelPortal:O94317 EnsemblFungi:SPBC215.13.1 GeneID:2540669
KEGG:spo:SPBC215.13 eggNOG:opiNOG43420 OMA:NPTDVTS NextBio:20801793
Uniprot:O94317
Length = 534
Score = 124 (48.7 bits), Expect = 0.00025, P = 0.00025
Identities = 68/292 (23%), Positives = 114/292 (39%)
Query: 110 YTIGSVTRVNGLSESKSSASGNLSVLNENSAKASLGKLSVSQNSDPLVKETKSLGRLSVS 169
YT S T + L + S +S L + S + S+ S+S +SDPL T S S S
Sbjct: 128 YTPSS-TESSSLLDPSSVSSAILP--SSTSVEVSISSSSLS-SSDPLTSSTFSSLSSSTS 183
Query: 170 QNSDPLLKETK--TLGRLS-VSQNSEPAKESKVLSSTGSVPGTPQRVNLNMGS-KTSVVN 225
+S P + T T + S +S S V+SS+ S P + L S TS +
Sbjct: 184 -SSQPSVSSTSSSTFSSAAPTSTSSSYLSSSSVVSSSSS-PSSSSSSTLTSSSLSTSSIP 241
Query: 226 STAVVSKRTSTRANTASNVPILNKSDIVPVIVPRTNTRFEQAVESRKDIDVIGRTM--PF 283
ST+ S TS+ +++S+ + S I+ +++ + I + P
Sbjct: 242 STSSSSSSTSSSLSSSSSSSTASSSSSSSSIISSSSSSSSSPTSTSSTISSSSSSSSSPT 301
Query: 284 SLQSKATDSRKFQNSGDEVDQPAVSVLCENTGSKATEVSSVADRNTFAAIKGSIQGVSVT 343
S S + S +S + + S T SS ++ + S + +
Sbjct: 302 STSSTISSSSSSSSSFSSTLSSSSMSSSSSFSSSPTSSSSTISSSSSSPSSSSFSSTTSS 361
Query: 344 ERNSKEDIFTVSGKSGTMSMSESPASYEDER-YDSLGHKSNRDGYAMESQKR 394
++S TVS S T S + + +S R S H S+ + S +
Sbjct: 362 SKSSSSFSSTVSSSSSTSSSTLTSSSSSSSRPASSSSHSSSLSSHKSSSSSK 413
>UNIPROTKB|G3V1X0 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 KO:K16482 CTD:282809
UniGene:Hs.604487 GeneID:282809 KEGG:hsa:282809 HGNC:HGNC:30836
ChiTaRS:POC1B GenomeRNAi:282809 NextBio:93521 RefSeq:NP_001186706.1
ProteinModelPortal:G3V1X0 SMR:G3V1X0 Ensembl:ENST00000549035
ArrayExpress:G3V1X0 Bgee:G3V1X0 Uniprot:G3V1X0
Length = 436
Score = 120 (47.3 bits), Expect = 0.00051, P = 0.00051
Identities = 37/144 (25%), Positives = 71/144 (49%)
Query: 3 GYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLL-CGLHESLKVFSW 61
G F + S D+++K W + + S T VRC F+PDGR ++ C +++K++
Sbjct: 72 GQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDT 131
Query: 62 EPIRC-HDAVD-VGWSRLSDLNVHEGKLLGCSYNQSCVGVWVVDISRI-EPYTI--GSVT 116
+C ++ D VG++ D N G + + + V VW V ++++ + Y + G V
Sbjct: 132 TNKQCVNNFSDSVGFANFVDFNP-SGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVN 190
Query: 117 RVN----GLSESKSSASGNLSVLN 136
++ G +S+ G L +L+
Sbjct: 191 CISFHPSGNYLITASSDGTLKILD 214
>UNIPROTKB|F1P8S8 [details] [associations]
symbol:POC1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=IEA] [GO:0005814
"centriole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OMA:TASWDTF EMBL:AAEX03009913
Ensembl:ENSCAFT00000015651 Uniprot:F1P8S8
Length = 478
Score = 120 (47.3 bits), Expect = 0.00059, P = 0.00059
Identities = 36/144 (25%), Positives = 73/144 (50%)
Query: 3 GYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLL-CGLHESLKVFSW 61
G F + S D+++K W++ + S T VRC F+PDGR ++ C +++K++
Sbjct: 114 GQFLATASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDT 173
Query: 62 EPIRC-HDAVD-VGWSRLSDLNVHEGKLLGCSYNQSCVGVWVVDISRI-EPYTI--GSVT 116
+C ++ D VG++ D N + G + + + V +W + ++++ + Y + G V
Sbjct: 174 TNKQCVNNFSDSVGFANFVDFNPN-GTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVN 232
Query: 117 RVN----GLSESKSSASGNLSVLN 136
V+ G +S+ G L +L+
Sbjct: 233 CVSFHPSGNYIITASSDGTLKILD 256
>UNIPROTKB|Q8TC44 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005813 "centrosome" evidence=IDA]
[GO:0005814 "centriole" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0005932 "microtubule basal body" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
UniGene:Hs.25130 HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743
CTD:282809 OrthoDB:EOG41VK2R EMBL:BC026080 EMBL:AK074772
IPI:IPI00152269 RefSeq:NP_758440.1 UniGene:Hs.604487
ProteinModelPortal:Q8TC44 SMR:Q8TC44 IntAct:Q8TC44 STRING:Q8TC44
PhosphoSite:Q8TC44 DMDM:74762610 PRIDE:Q8TC44 DNASU:282809
Ensembl:ENST00000313546 GeneID:282809 KEGG:hsa:282809
UCSC:uc001tba.3 GeneCards:GC12M089814 HGNC:HGNC:30836 HPA:HPA038841
MIM:614784 neXtProt:NX_Q8TC44 PharmGKB:PA165513299
InParanoid:Q8TC44 OMA:TASWDTF PhylomeDB:Q8TC44 ChiTaRS:POC1B
GenomeRNAi:282809 NextBio:93521 ArrayExpress:Q8TC44 Bgee:Q8TC44
CleanEx:HS_WDR51B Genevestigator:Q8TC44 GermOnline:ENSG00000139323
Uniprot:Q8TC44
Length = 478
Score = 120 (47.3 bits), Expect = 0.00059, P = 0.00059
Identities = 37/144 (25%), Positives = 71/144 (49%)
Query: 3 GYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLL-CGLHESLKVFSW 61
G F + S D+++K W + + S T VRC F+PDGR ++ C +++K++
Sbjct: 114 GQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDT 173
Query: 62 EPIRC-HDAVD-VGWSRLSDLNVHEGKLLGCSYNQSCVGVWVVDISRI-EPYTI--GSVT 116
+C ++ D VG++ D N G + + + V VW V ++++ + Y + G V
Sbjct: 174 TNKQCVNNFSDSVGFANFVDFNP-SGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVN 232
Query: 117 RVN----GLSESKSSASGNLSVLN 136
++ G +S+ G L +L+
Sbjct: 233 CISFHPSGNYLITASSDGTLKILD 256
>RGD|2323942 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=IEA;ISO] [GO:0005932 "microtubule basal body"
evidence=IEA;ISO] [GO:0042384 "cilium assembly" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:2323942 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OrthoDB:EOG41VK2R IPI:IPI00387818
ProteinModelPortal:D3ZW91 Ensembl:ENSRNOT00000031905
UCSC:RGD:2323942 ArrayExpress:D3ZW91 Uniprot:D3ZW91
Length = 477
Score = 119 (46.9 bits), Expect = 0.00075, P = 0.00075
Identities = 35/131 (26%), Positives = 66/131 (50%)
Query: 3 GYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLL-CGLHESLKVFSW 61
G F + S D+++K W + + S T VRC F+PDGR ++ C +++K++
Sbjct: 114 GQFLVTASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDT 173
Query: 62 EPIRC-HDAVD-VGWSRLSDLNVHEGKLLGCSYNQSCVGVWVVDISRI-EPYTIGSVTRV 118
+C ++ D VG++ D + + G + + + V +W + ++R+ + Y + S V
Sbjct: 174 TSKQCVNNFSDSVGFANFVDFSPN-GTCIASAGSDHAVRIWDIRMNRLLQHYQVHSCG-V 231
Query: 119 NGLSESKSSAS 129
N LS S S
Sbjct: 232 NCLSFHPSGNS 242
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.312 0.127 0.354 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 625 603 0.00086 120 3 11 23 0.45 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 26
No. of states in DFA: 618 (66 KB)
Total size of DFA: 308 KB (2159 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 60.56u 0.12s 60.68t Elapsed: 00:00:03
Total cpu time: 60.57u 0.12s 60.69t Elapsed: 00:00:03
Start: Sat May 11 04:01:17 2013 End: Sat May 11 04:01:20 2013