Query 006939
Match_columns 625
No_of_seqs 316 out of 1937
Neff 6.5
Searched_HMMs 29240
Date Mon Mar 25 12:58:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006939.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006939hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ow8_A WD repeat-containing pr 99.6 1.1E-14 3.6E-19 151.0 18.0 122 1-129 174-297 (321)
2 2ynn_A Coatomer subunit beta'; 99.6 1.3E-14 4.4E-19 148.5 17.7 123 1-129 23-147 (304)
3 1vyh_C Platelet-activating fac 99.6 1.1E-14 3.7E-19 155.9 15.9 121 1-128 118-240 (410)
4 1vyh_C Platelet-activating fac 99.6 5.5E-14 1.9E-18 150.4 17.2 122 1-129 160-283 (410)
5 4ery_A WD repeat-containing pr 99.5 1.3E-13 4.4E-18 140.2 18.8 121 1-128 33-155 (312)
6 1got_B GT-beta; complex (GTP-b 99.5 1.2E-13 4.3E-18 143.3 19.0 122 1-129 194-319 (340)
7 4gqb_B Methylosome protein 50; 99.5 1E-13 3.4E-18 145.8 18.2 122 1-129 137-264 (344)
8 3ow8_A WD repeat-containing pr 99.5 8.8E-14 3E-18 144.1 17.0 103 1-103 216-320 (321)
9 3frx_A Guanine nucleotide-bind 99.5 1.4E-13 4.9E-18 141.8 16.8 119 3-129 30-155 (319)
10 2ynn_A Coatomer subunit beta'; 99.5 2.1E-13 7E-18 139.4 17.2 103 1-103 65-171 (304)
11 2hes_X YDR267CP; beta-propelle 99.5 3.5E-13 1.2E-17 139.5 18.2 124 1-129 68-204 (330)
12 2pbi_B Guanine nucleotide-bind 99.5 4E-13 1.4E-17 140.8 18.7 121 2-129 209-333 (354)
13 2xzm_R RACK1; ribosome, transl 99.5 3.6E-13 1.2E-17 139.8 17.6 102 2-103 38-148 (343)
14 3frx_A Guanine nucleotide-bind 99.5 5E-13 1.7E-17 137.7 18.1 121 1-129 75-203 (319)
15 3fm0_A Protein CIAO1; WDR39,SG 99.5 4.3E-13 1.5E-17 139.7 17.1 124 1-128 26-156 (345)
16 4ery_A WD repeat-containing pr 99.5 1.3E-12 4.3E-17 132.8 18.5 103 1-103 75-179 (312)
17 3iz6_a 40S ribosomal protein R 99.5 5.5E-13 1.9E-17 140.8 16.4 102 2-103 217-328 (380)
18 1erj_A Transcriptional repress 99.5 1.3E-12 4.4E-17 138.6 18.7 102 1-103 133-237 (393)
19 2pbi_B Guanine nucleotide-bind 99.5 1E-12 3.5E-17 137.7 17.1 103 1-103 164-270 (354)
20 3fm0_A Protein CIAO1; WDR39,SG 99.5 1.1E-12 3.8E-17 136.6 17.2 124 1-129 71-201 (345)
21 3vl1_A 26S proteasome regulato 99.4 1.2E-12 4.1E-17 137.7 17.1 103 1-103 107-211 (420)
22 2hes_X YDR267CP; beta-propelle 99.4 1.3E-12 4.6E-17 135.1 17.1 103 1-103 117-229 (330)
23 1erj_A Transcriptional repress 99.4 1.7E-12 5.7E-17 137.7 18.0 121 2-129 218-359 (393)
24 4gqb_B Methylosome protein 50; 99.4 1E-12 3.6E-17 138.0 16.1 100 4-103 94-200 (344)
25 1got_B GT-beta; complex (GTP-b 99.4 2.4E-12 8.1E-17 133.6 18.0 122 1-129 65-191 (340)
26 2xzm_R RACK1; ribosome, transl 99.4 2.5E-12 8.7E-17 133.4 18.1 120 1-129 86-220 (343)
27 2pm7_B Protein transport prote 99.4 2.1E-12 7.1E-17 131.5 16.5 123 1-128 19-151 (297)
28 2aq5_A Coronin-1A; WD40 repeat 99.4 2.5E-12 8.6E-17 135.8 16.3 116 2-124 93-221 (402)
29 3iz6_a 40S ribosomal protein R 99.4 2.2E-12 7.6E-17 136.1 15.5 103 1-103 259-374 (380)
30 1nr0_A Actin interacting prote 99.4 3.6E-12 1.2E-16 143.5 18.1 103 1-103 157-269 (611)
31 2ymu_A WD-40 repeat protein; u 99.4 3.9E-12 1.3E-16 139.8 17.3 101 1-103 26-128 (577)
32 2ymu_A WD-40 repeat protein; u 99.4 4.4E-12 1.5E-16 139.3 17.7 119 1-129 436-556 (577)
33 4h5i_A Guanine nucleotide-exch 99.4 2.3E-12 7.9E-17 135.9 14.8 103 1-103 229-342 (365)
34 4g56_B MGC81050 protein; prote 99.4 2.4E-12 8.2E-17 135.2 14.6 100 3-103 239-342 (357)
35 1nr0_A Actin interacting prote 99.4 4.6E-12 1.6E-16 142.6 17.8 103 1-103 200-354 (611)
36 3f3f_A Nucleoporin SEH1; struc 99.4 4.9E-12 1.7E-16 127.0 16.1 103 1-103 21-142 (351)
37 3bg1_A Protein SEC13 homolog; 99.4 1.7E-12 6E-17 133.4 13.0 103 1-103 23-135 (316)
38 3gre_A Serine/threonine-protei 99.4 3.7E-12 1.3E-16 135.4 15.2 120 1-127 180-308 (437)
39 3k26_A Polycomb protein EED; W 99.4 7.2E-12 2.5E-16 128.0 16.5 101 3-103 85-191 (366)
40 2w18_A PALB2, fancn, partner a 99.4 5.2E-12 1.8E-16 133.9 15.7 117 2-126 192-329 (356)
41 4e54_B DNA damage-binding prot 99.4 4.3E-12 1.5E-16 136.2 14.7 120 2-129 131-257 (435)
42 2pm7_B Protein transport prote 99.4 8.2E-12 2.8E-16 127.1 16.0 126 2-130 66-212 (297)
43 3lrv_A PRE-mRNA-splicing facto 99.4 5.8E-12 2E-16 130.5 15.1 101 2-103 138-243 (343)
44 3vl1_A 26S proteasome regulato 99.4 5.2E-12 1.8E-16 132.8 14.9 103 1-103 149-277 (420)
45 3zwl_B Eukaryotic translation 99.4 1.9E-11 6.6E-16 124.7 18.7 102 1-103 42-150 (369)
46 4g56_B MGC81050 protein; prote 99.4 8.4E-12 2.9E-16 131.1 16.0 122 1-129 149-276 (357)
47 3jrp_A Fusion protein of prote 99.3 1.1E-11 3.9E-16 127.1 16.1 124 1-129 21-154 (379)
48 3dwl_C Actin-related protein 2 99.3 1.3E-12 4.5E-17 135.6 9.1 125 1-129 21-153 (377)
49 3v7d_B Cell division control p 99.3 1.9E-11 6.5E-16 130.9 17.8 101 2-103 131-235 (464)
50 3sfz_A APAF-1, apoptotic pepti 99.3 1.6E-11 5.5E-16 148.0 18.9 122 1-129 625-750 (1249)
51 3dm0_A Maltose-binding peripla 99.3 1.4E-11 4.9E-16 140.3 17.4 122 1-129 440-568 (694)
52 3mkq_A Coatomer beta'-subunit; 99.3 1.5E-11 5.3E-16 140.8 17.7 103 1-103 23-127 (814)
53 4gq1_A NUP37; propeller, trans 99.3 3.8E-12 1.3E-16 135.3 11.6 102 2-103 100-217 (393)
54 3mmy_A MRNA export factor; mRN 99.3 2.3E-11 8E-16 124.0 16.8 100 3-103 54-159 (368)
55 4h5i_A Guanine nucleotide-exch 99.3 2.2E-11 7.5E-16 128.4 17.0 122 1-130 143-320 (365)
56 3dwl_C Actin-related protein 2 99.3 4.3E-12 1.5E-16 131.7 11.1 124 1-128 110-257 (377)
57 3vu4_A KMHSV2; beta-propeller 99.3 1.2E-11 4.2E-16 129.6 14.7 95 9-103 155-270 (355)
58 3ei3_B DNA damage-binding prot 99.3 3E-11 1E-15 126.0 17.4 114 1-123 173-294 (383)
59 3dm0_A Maltose-binding peripla 99.3 2.4E-11 8.3E-16 138.4 17.9 102 2-103 394-502 (694)
60 1sq9_A Antiviral protein SKI8; 99.3 3.2E-11 1.1E-15 125.5 17.3 111 1-119 196-330 (397)
61 1sq9_A Antiviral protein SKI8; 99.3 1.9E-11 6.5E-16 127.2 15.5 103 1-103 243-394 (397)
62 4aow_A Guanine nucleotide-bind 99.3 3.3E-11 1.1E-15 122.2 16.8 102 1-103 225-336 (340)
63 3v7d_B Cell division control p 99.3 3E-11 1E-15 129.3 16.4 102 1-103 278-380 (464)
64 1gxr_A ESG1, transducin-like e 99.3 1E-10 3.4E-15 118.0 19.1 118 1-127 151-270 (337)
65 3lrv_A PRE-mRNA-splicing facto 99.3 1.1E-11 3.6E-16 128.5 12.0 103 1-103 180-291 (343)
66 1pgu_A Actin interacting prote 99.3 2.1E-11 7.2E-16 134.0 15.0 102 1-103 498-613 (615)
67 3f3f_A Nucleoporin SEH1; struc 99.3 4.4E-11 1.5E-15 120.0 16.0 102 2-103 70-248 (351)
68 1r5m_A SIR4-interacting protei 99.3 3.6E-11 1.2E-15 125.1 15.7 102 1-103 257-360 (425)
69 3k26_A Polycomb protein EED; W 99.3 2.1E-11 7.2E-16 124.5 13.6 101 2-103 127-259 (366)
70 4aez_A CDC20, WD repeat-contai 99.3 7.6E-11 2.6E-15 124.7 18.2 120 1-129 144-266 (401)
71 2ovr_B FBW7, F-BOX/WD repeat p 99.3 5.6E-11 1.9E-15 127.2 17.1 119 1-129 127-246 (445)
72 2oaj_A Protein SNI1; WD40 repe 99.3 1.4E-11 4.9E-16 145.9 13.5 126 1-129 445-629 (902)
73 1gxr_A ESG1, transducin-like e 99.3 8.2E-11 2.8E-15 118.6 17.2 103 1-103 107-213 (337)
74 3odt_A Protein DOA1; ubiquitin 99.3 4.5E-11 1.5E-15 119.5 14.9 100 1-103 194-295 (313)
75 4ggc_A P55CDC, cell division c 99.3 1.2E-10 4.1E-15 116.9 18.0 116 4-127 37-155 (318)
76 1k8k_C P40, ARP2/3 complex 41 99.3 8.9E-11 3E-15 120.6 17.3 120 1-127 106-249 (372)
77 3ei3_B DNA damage-binding prot 99.3 6.3E-11 2.1E-15 123.6 16.3 120 1-129 83-211 (383)
78 1k8k_C P40, ARP2/3 complex 41 99.3 4.4E-11 1.5E-15 122.9 14.9 103 1-103 18-126 (372)
79 1p22_A F-BOX/WD-repeat protein 99.3 9.5E-11 3.3E-15 125.3 17.7 121 1-128 141-262 (435)
80 4aow_A Guanine nucleotide-bind 99.3 1.2E-10 4.2E-15 117.9 17.6 100 3-103 185-285 (340)
81 4gga_A P55CDC, cell division c 99.3 1.1E-10 3.9E-15 124.3 18.2 118 3-128 116-236 (420)
82 2j04_B YDR362CP, TAU91; beta p 99.3 4.2E-12 1.5E-16 141.7 7.3 103 1-103 320-427 (524)
83 3jrp_A Fusion protein of prote 99.3 9E-11 3.1E-15 120.3 16.7 125 2-129 68-213 (379)
84 3gre_A Serine/threonine-protei 99.3 2.3E-11 7.9E-16 129.2 12.7 117 1-124 224-372 (437)
85 4gq1_A NUP37; propeller, trans 99.3 2E-11 6.9E-16 129.7 12.2 102 2-103 155-285 (393)
86 2aq5_A Coronin-1A; WD40 repeat 99.3 5.3E-11 1.8E-15 125.6 15.2 103 1-103 141-253 (402)
87 1p22_A F-BOX/WD-repeat protein 99.2 6.5E-11 2.2E-15 126.6 16.0 124 2-128 265-391 (435)
88 4e54_B DNA damage-binding prot 99.2 2.4E-11 8.2E-16 130.4 12.6 102 1-103 219-326 (435)
89 3zwl_B Eukaryotic translation 99.2 1.6E-10 5.5E-15 117.7 18.2 121 1-129 185-322 (369)
90 2j04_B YDR362CP, TAU91; beta p 99.2 2.3E-11 7.8E-16 135.8 12.0 120 4-130 278-405 (524)
91 3mmy_A MRNA export factor; mRN 99.2 1E-10 3.6E-15 119.1 15.6 66 1-67 96-164 (368)
92 3dw8_B Serine/threonine-protei 99.2 8.2E-11 2.8E-15 124.4 15.1 114 1-122 187-327 (447)
93 3bg1_A Protein SEC13 homolog; 99.2 3.1E-11 1.1E-15 124.0 11.4 101 3-103 179-292 (316)
94 3vu4_A KMHSV2; beta-propeller 99.2 8.8E-11 3E-15 123.0 14.3 103 1-103 205-335 (355)
95 1r5m_A SIR4-interacting protei 99.2 1.9E-10 6.4E-15 119.7 16.6 102 1-103 55-179 (425)
96 2pm9_A Protein WEB1, protein t 99.2 1.1E-10 3.9E-15 121.9 15.0 122 1-129 175-312 (416)
97 3dw8_B Serine/threonine-protei 99.2 8.8E-11 3E-15 124.2 13.9 102 1-103 38-206 (447)
98 1pgu_A Actin interacting prote 99.2 1.6E-10 5.3E-15 127.1 15.8 121 3-129 456-591 (615)
99 2oaj_A Protein SNI1; WD40 repe 99.2 1.3E-10 4.5E-15 137.6 16.3 117 1-122 498-675 (902)
100 3odt_A Protein DOA1; ubiquitin 99.2 3.9E-10 1.3E-14 112.6 16.9 117 1-128 153-272 (313)
101 2j04_A TAU60, YPL007P, hypothe 99.2 1.3E-10 4.3E-15 130.6 14.6 118 1-129 139-272 (588)
102 2vdu_B TRNA (guanine-N(7)-)-me 99.2 1E-10 3.5E-15 125.8 13.4 122 1-129 112-248 (450)
103 2w18_A PALB2, fancn, partner a 99.2 1.3E-10 4.3E-15 123.3 13.7 95 6-102 253-355 (356)
104 4gga_A P55CDC, cell division c 99.2 2.5E-10 8.4E-15 121.7 16.1 100 3-103 289-394 (420)
105 2vdu_B TRNA (guanine-N(7)-)-me 99.2 1.1E-10 3.8E-15 125.6 13.5 103 1-103 159-270 (450)
106 4aez_A CDC20, WD repeat-contai 99.2 3E-10 1E-14 120.2 16.5 120 3-129 103-224 (401)
107 2j04_A TAU60, YPL007P, hypothe 99.2 1.5E-10 5.2E-15 129.9 14.9 98 1-103 95-210 (588)
108 3i2n_A WD repeat-containing pr 99.2 1.9E-10 6.4E-15 117.2 14.2 102 1-103 178-290 (357)
109 2ovr_B FBW7, F-BOX/WD repeat p 99.2 3.7E-10 1.3E-14 120.7 17.2 116 3-128 169-285 (445)
110 2pm9_A Protein WEB1, protein t 99.2 8.9E-11 3.1E-15 122.7 12.0 103 1-103 224-336 (416)
111 3i2n_A WD repeat-containing pr 99.2 5.8E-11 2E-15 121.0 10.3 102 2-103 223-352 (357)
112 2xyi_A Probable histone-bindin 99.2 2.7E-10 9.4E-15 122.1 16.1 128 2-129 243-385 (430)
113 4a11_B DNA excision repair pro 99.2 4.4E-10 1.5E-14 116.4 16.8 102 2-103 155-275 (408)
114 3mkq_A Coatomer beta'-subunit; 99.2 2.3E-10 7.8E-15 131.1 16.1 103 1-103 65-171 (814)
115 4a11_B DNA excision repair pro 99.2 3.3E-10 1.1E-14 117.3 15.8 121 1-129 54-193 (408)
116 3jro_A Fusion protein of prote 99.2 2.2E-10 7.4E-15 132.6 15.9 124 1-129 19-152 (753)
117 2xyi_A Probable histone-bindin 99.1 5.4E-10 1.8E-14 119.8 16.9 123 1-129 191-328 (430)
118 2oit_A Nucleoporin 214KDA; NH2 99.1 6.3E-11 2.1E-15 128.7 9.7 103 1-103 102-222 (434)
119 3sfz_A APAF-1, apoptotic pepti 99.1 4.3E-10 1.5E-14 135.6 17.1 103 1-103 667-773 (1249)
120 1yfq_A Cell cycle arrest prote 99.1 3.2E-10 1.1E-14 115.2 12.6 102 1-103 21-130 (342)
121 1yfq_A Cell cycle arrest prote 99.1 8.1E-10 2.8E-14 112.2 14.7 116 6-128 163-300 (342)
122 4ggc_A P55CDC, cell division c 99.1 1.2E-09 4.2E-14 109.4 14.3 97 6-103 214-314 (318)
123 3jro_A Fusion protein of prote 99.1 1.1E-09 3.9E-14 126.5 15.4 126 2-130 66-212 (753)
124 1l0q_A Surface layer protein; 98.9 1.3E-08 4.3E-13 106.0 16.0 99 3-103 2-104 (391)
125 3bws_A Protein LP49; two-domai 98.9 1.1E-08 3.9E-13 107.9 13.2 103 1-103 132-242 (433)
126 1l0q_A Surface layer protein; 98.9 4.1E-08 1.4E-12 102.1 17.1 101 1-103 41-146 (391)
127 2oit_A Nucleoporin 214KDA; NH2 98.8 1.7E-08 5.9E-13 109.4 12.9 102 1-103 159-277 (434)
128 3bws_A Protein LP49; two-domai 98.8 3.8E-08 1.3E-12 103.8 13.9 102 1-103 179-291 (433)
129 1nir_A Nitrite reductase; hemo 98.7 2.2E-07 7.6E-12 103.8 15.3 101 1-103 147-256 (543)
130 2hqs_A Protein TOLB; TOLB, PAL 98.6 7.9E-07 2.7E-11 95.3 17.1 101 1-103 188-299 (415)
131 2hqs_A Protein TOLB; TOLB, PAL 98.4 1.8E-06 6.1E-11 92.5 14.8 99 3-103 143-255 (415)
132 1jmx_B Amine dehydrogenase; ox 98.4 2.8E-06 9.5E-11 86.0 14.8 103 1-103 9-133 (349)
133 3u4y_A Uncharacterized protein 98.4 3.1E-06 1.1E-10 85.6 15.0 100 3-103 10-116 (331)
134 2ecf_A Dipeptidyl peptidase IV 98.4 1.7E-06 5.6E-11 98.4 12.9 101 1-103 46-180 (741)
135 1nir_A Nitrite reductase; hemo 98.4 4.2E-06 1.4E-10 93.4 15.7 102 1-103 188-310 (543)
136 2ojh_A Uncharacterized protein 98.4 4.7E-06 1.6E-10 81.4 14.2 102 1-103 138-257 (297)
137 2ojh_A Uncharacterized protein 98.3 3.8E-06 1.3E-10 82.0 12.9 101 1-104 51-160 (297)
138 3o4h_A Acylamino-acid-releasin 98.3 8.9E-07 3E-11 98.2 9.4 100 1-102 159-274 (582)
139 3vgz_A Uncharacterized protein 98.3 1.1E-05 3.8E-10 81.8 16.9 103 1-103 150-261 (353)
140 3vgz_A Uncharacterized protein 98.3 6.9E-06 2.4E-10 83.4 15.3 103 1-103 98-214 (353)
141 3u4y_A Uncharacterized protein 98.3 7E-06 2.4E-10 83.0 13.9 102 1-103 49-159 (331)
142 1ri6_A Putative isomerase YBHE 98.3 4.5E-06 1.5E-10 84.0 12.2 101 1-103 47-159 (343)
143 1pby_B Quinohemoprotein amine 98.3 2.1E-05 7.1E-10 78.9 16.7 67 35-103 242-309 (337)
144 2ecf_A Dipeptidyl peptidase IV 98.2 3.9E-06 1.4E-10 95.3 12.1 94 1-95 118-230 (741)
145 1pby_B Quinohemoprotein amine 98.2 1.5E-05 5E-10 80.1 14.9 100 4-103 2-123 (337)
146 1xfd_A DIP, dipeptidyl aminope 98.2 2.3E-06 8E-11 96.8 9.4 101 1-103 26-142 (723)
147 1k32_A Tricorn protease; prote 98.2 5.5E-06 1.9E-10 99.0 13.0 102 1-103 388-501 (1045)
148 1xfd_A DIP, dipeptidyl aminope 98.2 3.9E-06 1.3E-10 94.9 10.8 94 1-94 70-193 (723)
149 1k32_A Tricorn protease; prote 98.2 1.1E-05 3.6E-10 96.5 15.0 101 2-103 347-460 (1045)
150 1ri6_A Putative isomerase YBHE 98.2 1.2E-05 4E-10 81.0 13.1 102 1-103 93-208 (343)
151 3scy_A Hypothetical bacterial 98.2 2.1E-05 7.2E-10 81.1 15.0 102 1-103 220-336 (361)
152 3hfq_A Uncharacterized protein 98.1 1.2E-05 4E-10 82.4 11.9 103 1-103 49-170 (347)
153 1z68_A Fibroblast activation p 98.1 3.2E-06 1.1E-10 96.0 7.9 100 1-103 25-138 (719)
154 3scy_A Hypothetical bacterial 98.1 4.5E-05 1.5E-09 78.6 14.8 103 1-103 164-290 (361)
155 3hfq_A Uncharacterized protein 98.0 5.8E-05 2E-09 77.2 14.9 103 1-103 196-316 (347)
156 4a5s_A Dipeptidyl peptidase 4 98.0 2E-05 7E-10 90.5 12.4 99 1-103 26-140 (740)
157 2z3z_A Dipeptidyl aminopeptida 98.0 2.2E-05 7.5E-10 88.8 12.4 102 1-103 130-292 (706)
158 1z68_A Fibroblast activation p 98.0 1E-05 3.4E-10 91.9 9.4 93 1-94 69-189 (719)
159 1jof_A Carboxy-CIS,CIS-muconat 98.0 7.3E-05 2.5E-09 77.8 14.8 93 11-103 117-223 (365)
160 1jmx_B Amine dehydrogenase; ox 98.0 0.00013 4.5E-09 73.5 15.7 66 36-103 257-324 (349)
161 2z3z_A Dipeptidyl aminopeptida 97.9 4.6E-05 1.6E-09 86.1 12.5 93 11-103 233-341 (706)
162 3pe7_A Oligogalacturonate lyas 97.9 0.00015 5E-09 75.0 14.7 90 1-90 45-141 (388)
163 3o4h_A Acylamino-acid-releasin 97.9 5.3E-05 1.8E-09 83.9 11.7 95 4-103 124-226 (582)
164 3fvz_A Peptidyl-glycine alpha- 97.9 6.3E-05 2.1E-09 77.4 11.3 102 1-103 205-321 (329)
165 3no2_A Uncharacterized protein 97.8 0.0002 6.9E-09 72.6 13.4 100 2-103 4-107 (276)
166 1q7f_A NHL, brain tumor CG1071 97.8 0.00035 1.2E-08 69.3 14.9 100 1-103 173-279 (286)
167 1jof_A Carboxy-CIS,CIS-muconat 97.8 0.00039 1.3E-08 72.3 15.6 103 1-103 154-290 (365)
168 2oiz_A Aromatic amine dehydrog 97.7 0.00016 5.6E-09 75.8 11.8 100 2-103 14-139 (361)
169 3azo_A Aminopeptidase; POP fam 97.6 0.00016 5.4E-09 81.0 11.1 102 1-103 139-271 (662)
170 1q7f_A NHL, brain tumor CG1071 97.6 0.00086 2.9E-08 66.5 15.3 101 1-103 130-237 (286)
171 3azo_A Aminopeptidase; POP fam 97.6 0.00029 9.9E-09 78.9 13.2 102 1-103 197-322 (662)
172 3fvz_A Peptidyl-glycine alpha- 97.6 0.00083 2.8E-08 68.9 14.7 103 1-103 33-174 (329)
173 4a5s_A Dipeptidyl peptidase 4 97.6 0.00015 5.3E-09 83.1 10.1 102 1-103 71-201 (740)
174 2dg1_A DRP35, lactonase; beta 97.5 0.0012 4E-08 66.9 14.5 93 1-93 54-154 (333)
175 2xdw_A Prolyl endopeptidase; a 97.5 0.00043 1.5E-08 78.9 12.3 102 1-103 134-267 (710)
176 2oiz_A Aromatic amine dehydrog 97.5 0.00063 2.1E-08 71.3 12.4 71 12-85 285-359 (361)
177 1qks_A Cytochrome CD1 nitrite 97.5 0.0013 4.6E-08 73.8 15.6 100 2-103 166-274 (567)
178 2bkl_A Prolyl endopeptidase; m 97.5 0.00038 1.3E-08 79.2 11.3 99 1-101 130-258 (695)
179 1rwi_B Serine/threonine-protei 97.4 0.0012 4.1E-08 64.4 13.0 103 1-103 159-263 (270)
180 2gop_A Trilobed protease; beta 97.3 0.0016 5.5E-08 66.0 12.4 98 1-103 68-206 (347)
181 3dsm_A Uncharacterized protein 97.2 0.0026 9E-08 65.4 13.4 101 2-103 53-160 (328)
182 1xip_A Nucleoporin NUP159; bet 97.2 0.0013 4.4E-08 70.6 11.2 93 2-103 96-190 (388)
183 1pjx_A Dfpase, DIISOPROPYLFLUO 97.2 0.0033 1.1E-07 62.6 13.4 103 1-103 185-298 (314)
184 3e5z_A Putative gluconolactona 97.1 0.0029 9.9E-08 63.2 12.0 88 1-90 37-131 (296)
185 3no2_A Uncharacterized protein 97.1 0.0044 1.5E-07 62.6 13.1 101 1-103 86-194 (276)
186 3e5z_A Putative gluconolactona 97.1 0.0044 1.5E-07 61.8 13.1 91 1-94 181-277 (296)
187 1rwi_B Serine/threonine-protei 97.1 0.0032 1.1E-07 61.4 11.4 103 1-103 117-221 (270)
188 3sjl_D Methylamine dehydrogena 97.1 0.0042 1.4E-07 66.6 13.1 101 1-103 42-168 (386)
189 3pe7_A Oligogalacturonate lyas 97.0 0.0065 2.2E-07 62.4 14.1 102 1-103 90-224 (388)
190 2dg1_A DRP35, lactonase; beta 97.0 0.0013 4.6E-08 66.5 8.6 97 4-103 18-120 (333)
191 3c5m_A Oligogalacturonate lyas 97.0 0.0011 3.7E-08 68.2 8.0 71 1-71 45-119 (396)
192 2xdw_A Prolyl endopeptidase; a 96.9 0.0081 2.8E-07 68.3 14.4 103 1-103 180-319 (710)
193 3dsm_A Uncharacterized protein 96.9 0.0061 2.1E-07 62.6 12.0 102 1-103 181-301 (328)
194 2mad_H Methylamine dehydrogena 96.9 0.014 4.7E-07 61.7 15.0 100 1-103 30-155 (373)
195 2gop_A Trilobed protease; beta 96.9 0.008 2.7E-07 60.8 12.7 96 1-103 224-330 (347)
196 1xip_A Nucleoporin NUP159; bet 96.9 0.0033 1.1E-07 67.4 10.2 79 6-90 139-230 (388)
197 1qks_A Cytochrome CD1 nitrite 96.7 0.016 5.6E-07 64.9 14.4 102 1-103 206-328 (567)
198 2hz6_A Endoplasmic reticulum t 96.7 0.00049 1.7E-08 72.6 1.7 100 2-103 8-110 (369)
199 3c5m_A Oligogalacturonate lyas 96.6 0.0089 3.1E-07 61.2 10.7 100 1-103 247-381 (396)
200 1yr2_A Prolyl oligopeptidase; 96.5 0.0063 2.2E-07 69.7 10.0 101 1-103 172-302 (741)
201 2bkl_A Prolyl endopeptidase; m 96.5 0.019 6.4E-07 65.2 13.7 102 1-103 177-303 (695)
202 1pjx_A Dfpase, DIISOPROPYLFLUO 96.5 0.015 5E-07 57.8 11.1 93 1-94 27-137 (314)
203 3sjl_D Methylamine dehydrogena 96.4 0.016 5.4E-07 62.1 11.8 101 1-103 87-207 (386)
204 2z2n_A Virginiamycin B lyase; 96.4 0.05 1.7E-06 53.1 14.5 101 1-103 150-254 (299)
205 2mad_H Methylamine dehydrogena 96.3 0.045 1.5E-06 57.7 14.4 99 1-102 75-194 (373)
206 2z2n_A Virginiamycin B lyase; 96.3 0.063 2.1E-06 52.4 14.5 101 1-103 108-212 (299)
207 3c75_H MADH, methylamine dehyd 96.1 0.046 1.6E-06 59.2 13.2 101 1-103 82-208 (426)
208 2qc5_A Streptogramin B lactona 95.9 0.13 4.6E-06 50.0 14.6 101 1-103 29-133 (300)
209 1yr2_A Prolyl oligopeptidase; 95.8 0.094 3.2E-06 59.9 14.8 102 1-103 218-349 (741)
210 2qe8_A Uncharacterized protein 95.7 0.056 1.9E-06 55.6 11.5 102 1-103 26-153 (343)
211 1mda_H Methylamine dehydrogena 95.6 0.046 1.6E-06 58.0 10.5 98 4-103 33-157 (368)
212 2qc5_A Streptogramin B lactona 95.5 0.24 8.2E-06 48.2 14.8 101 1-103 155-259 (300)
213 3g4e_A Regucalcin; six bladed 95.5 0.17 5.7E-06 50.7 13.9 88 2-92 24-116 (297)
214 3iuj_A Prolyl endopeptidase; h 95.4 0.033 1.1E-06 63.4 9.2 100 1-103 138-267 (693)
215 3g4e_A Regucalcin; six bladed 95.4 0.12 4.2E-06 51.7 12.4 88 1-88 158-256 (297)
216 3hrp_A Uncharacterized protein 95.3 0.12 4.1E-06 55.0 12.5 100 1-103 140-248 (409)
217 1kb0_A Quinohemoprotein alcoho 95.3 0.13 4.6E-06 58.6 13.6 100 4-103 328-506 (677)
218 2hz6_A Endoplasmic reticulum t 95.1 0.0071 2.4E-07 63.6 2.1 95 3-103 92-191 (369)
219 2ece_A 462AA long hypothetical 94.9 0.21 7E-06 54.6 13.2 102 1-103 147-288 (462)
220 3hrp_A Uncharacterized protein 94.9 0.3 1E-05 51.9 14.3 99 2-102 278-408 (409)
221 3nok_A Glutaminyl cyclase; bet 94.8 0.14 4.9E-06 52.0 10.7 98 2-103 64-163 (268)
222 2iwa_A Glutamine cyclotransfer 94.8 0.29 9.8E-06 49.6 12.9 99 1-103 30-134 (266)
223 3c75_H MADH, methylamine dehyd 94.6 0.13 4.4E-06 55.7 10.6 101 1-103 127-247 (426)
224 3dr2_A Exported gluconolactona 94.6 0.25 8.6E-06 49.5 12.1 100 1-103 95-223 (305)
225 1yiq_A Quinohemoprotein alcoho 94.6 0.37 1.3E-05 55.1 14.9 99 5-103 321-504 (689)
226 2ece_A 462AA long hypothetical 94.5 0.32 1.1E-05 53.0 13.2 103 1-103 197-351 (462)
227 3nol_A Glutamine cyclotransfer 94.4 0.35 1.2E-05 48.9 12.6 99 2-103 52-154 (262)
228 2ghs_A AGR_C_1268P; regucalcin 94.3 0.63 2.2E-05 47.2 14.6 102 1-103 143-259 (326)
229 2qe8_A Uncharacterized protein 94.1 0.16 5.3E-06 52.2 9.5 99 3-102 132-276 (343)
230 3dr2_A Exported gluconolactona 93.9 0.39 1.3E-05 48.1 11.7 87 1-90 54-147 (305)
231 2ghs_A AGR_C_1268P; regucalcin 93.8 0.92 3.1E-05 46.0 14.5 87 1-88 188-286 (326)
232 3mbr_X Glutamine cyclotransfer 93.6 0.97 3.3E-05 45.1 13.8 98 3-103 31-132 (243)
233 3nok_A Glutaminyl cyclase; bet 93.3 0.85 2.9E-05 46.2 13.0 98 3-103 106-209 (268)
234 2iwa_A Glutamine cyclotransfer 93.2 1 3.5E-05 45.5 13.4 97 4-103 77-180 (266)
235 3mbr_X Glutamine cyclotransfer 92.8 1.2 4E-05 44.5 13.1 98 3-103 75-178 (243)
236 3nol_A Glutamine cyclotransfer 92.8 0.8 2.7E-05 46.3 11.9 97 4-103 98-200 (262)
237 3q7m_A Lipoprotein YFGL, BAMB; 92.6 0.72 2.5E-05 47.2 11.7 96 3-101 277-375 (376)
238 3q7m_A Lipoprotein YFGL, BAMB; 92.3 1.5 5.2E-05 44.8 13.7 99 3-103 53-161 (376)
239 1mda_H Methylamine dehydrogena 91.9 0.39 1.3E-05 50.8 8.7 74 1-75 273-358 (368)
240 1k3i_A Galactose oxidase precu 91.8 0.57 2E-05 52.8 10.5 102 2-103 197-322 (656)
241 1fwx_A Nitrous oxide reductase 91.7 0.52 1.8E-05 53.0 9.7 88 14-103 255-360 (595)
242 3iuj_A Prolyl endopeptidase; h 91.6 2 6.8E-05 48.6 14.8 102 2-103 184-313 (693)
243 2ad6_A Methanol dehydrogenase 91.2 2.1 7.1E-05 47.6 14.1 100 4-103 317-493 (571)
244 1npe_A Nidogen, entactin; glyc 91.1 4.4 0.00015 39.2 15.0 101 3-103 48-154 (267)
245 1kb0_A Quinohemoprotein alcoho 90.3 1.1 3.9E-05 50.9 11.1 61 13-74 457-518 (677)
246 3hxj_A Pyrrolo-quinoline quino 90.2 1.6 5.4E-05 43.1 10.9 55 9-67 153-207 (330)
247 1kv9_A Type II quinohemoprotei 89.6 2.2 7.6E-05 48.3 12.7 98 5-103 316-487 (668)
248 1npe_A Nidogen, entactin; glyc 89.2 9.4 0.00032 36.8 15.5 99 3-103 134-237 (267)
249 1flg_A Protein (quinoprotein e 89.0 3 0.0001 46.6 13.0 48 55-103 467-515 (582)
250 3hxj_A Pyrrolo-quinoline quino 88.9 2 6.9E-05 42.4 10.5 91 5-101 109-201 (330)
251 1yiq_A Quinohemoprotein alcoho 88.0 1.4 4.8E-05 50.2 9.7 61 12-73 454-515 (689)
252 2xe4_A Oligopeptidase B; hydro 88.0 0.85 2.9E-05 52.4 7.9 100 1-103 184-303 (751)
253 1w6s_A Methanol dehydrogenase 87.4 6.7 0.00023 44.0 14.6 100 4-103 324-502 (599)
254 2fp8_A Strictosidine synthase; 87.3 5.7 0.00019 39.7 12.8 101 1-103 194-312 (322)
255 1fwx_A Nitrous oxide reductase 87.1 3 0.0001 46.9 11.4 101 1-103 145-307 (595)
256 2p4o_A Hypothetical protein; p 86.8 11 0.00038 37.4 14.7 101 1-103 41-146 (306)
257 2fp8_A Strictosidine synthase; 81.3 15 0.00052 36.5 12.9 91 1-91 28-144 (322)
258 3v65_B Low-density lipoprotein 74.2 38 0.0013 35.1 13.8 99 3-101 214-315 (386)
259 4a2l_A BT_4663, two-component 73.3 48 0.0017 37.6 15.5 99 2-103 416-525 (795)
260 2ad6_A Methanol dehydrogenase 72.5 9.4 0.00032 42.3 9.0 62 11-73 442-504 (571)
261 3v64_C Agrin; beta propeller, 72.1 53 0.0018 33.4 14.1 98 3-101 171-272 (349)
262 3tc9_A Hypothetical hydrolase; 70.8 35 0.0012 36.1 12.7 97 3-103 150-256 (430)
263 2p9w_A MAL S 1 allergenic prot 70.3 48 0.0016 34.4 13.1 101 3-103 25-167 (334)
264 1kv9_A Type II quinohemoprotei 70.2 23 0.00077 39.9 11.6 99 3-103 66-186 (668)
265 1ijq_A LDL receptor, low-densi 69.8 92 0.0031 31.0 15.2 101 3-103 89-194 (316)
266 3v64_C Agrin; beta propeller, 68.3 97 0.0033 31.4 15.1 101 3-103 85-190 (349)
267 3v65_B Low-density lipoprotein 67.3 69 0.0024 33.1 13.9 101 3-103 128-233 (386)
268 1ijq_A LDL receptor, low-densi 66.2 1.1E+02 0.0036 30.5 14.7 101 3-103 42-151 (316)
269 1w6s_A Methanol dehydrogenase 66.0 31 0.0011 38.6 11.5 100 4-103 63-190 (599)
270 3pbp_A Nucleoporin NUP82; beta 65.8 72 0.0025 34.4 13.6 93 12-104 40-158 (452)
271 2xe4_A Oligopeptidase B; hydro 65.7 41 0.0014 38.3 12.7 103 1-103 280-397 (751)
272 3p5b_L Low density lipoprotein 65.2 96 0.0033 32.2 14.6 101 3-103 171-276 (400)
273 4hw6_A Hypothetical protein, I 64.8 38 0.0013 35.9 11.5 61 2-62 239-303 (433)
274 2vpj_A Kelch-like protein 12; 64.4 39 0.0013 32.9 10.7 100 2-103 159-277 (301)
275 2p9w_A MAL S 1 allergenic prot 64.1 56 0.0019 33.9 12.1 91 12-103 99-214 (334)
276 1k3i_A Galactose oxidase precu 63.4 14 0.00048 41.3 8.0 68 1-68 252-328 (656)
277 4a2l_A BT_4663, two-component 63.4 93 0.0032 35.2 15.1 99 2-103 367-479 (795)
278 3tc9_A Hypothetical hydrolase; 60.2 56 0.0019 34.5 11.7 70 34-103 226-300 (430)
279 3sov_A LRP-6, low-density lipo 60.1 1.3E+02 0.0045 30.2 14.1 101 3-103 91-196 (318)
280 3m0c_C LDL receptor, low-densi 59.0 1.3E+02 0.0043 34.8 15.2 101 3-103 483-588 (791)
281 2p4o_A Hypothetical protein; p 58.5 45 0.0016 32.8 10.1 79 2-82 177-262 (306)
282 1flg_A Protein (quinoprotein e 58.3 20 0.00069 39.7 8.1 62 12-74 465-527 (582)
283 4hw6_A Hypothetical protein, I 57.9 55 0.0019 34.7 11.2 98 3-103 153-258 (433)
284 2xbg_A YCF48-like protein; pho 57.4 92 0.0031 31.1 12.3 99 2-102 215-320 (327)
285 3ii7_A Kelch-like protein 7; p 57.2 50 0.0017 32.2 10.1 100 2-103 101-224 (306)
286 2xn4_A Kelch-like protein 2; s 53.5 63 0.0022 31.4 10.1 100 2-103 155-275 (302)
287 3pbp_A Nucleoporin NUP82; beta 53.2 1.7E+02 0.0059 31.5 13.8 62 1-63 75-158 (452)
288 3kya_A Putative phosphatase; s 52.3 99 0.0034 33.7 12.2 100 3-103 152-277 (496)
289 1juq_A ADP-ribosylation factor 52.2 53 0.0018 30.6 8.7 79 485-568 8-90 (171)
290 3v9f_A Two-component system se 52.0 1.1E+02 0.0038 34.5 13.1 99 2-103 417-523 (781)
291 2vpj_A Kelch-like protein 12; 51.9 90 0.0031 30.2 11.0 100 2-103 62-183 (301)
292 3qqz_A Putative uncharacterize 51.9 1.1E+02 0.0038 30.1 11.5 75 28-103 21-99 (255)
293 2xn4_A Kelch-like protein 2; s 51.7 99 0.0034 29.9 11.2 100 2-103 108-228 (302)
294 2ism_A Putative oxidoreductase 50.8 1.9E+02 0.0065 29.2 13.7 61 1-64 40-115 (352)
295 1tl2_A L10, protein (tachylect 50.2 81 0.0028 31.1 9.9 98 1-102 2-114 (236)
296 3sov_A LRP-6, low-density lipo 48.8 2.2E+02 0.0074 28.5 15.6 91 12-103 144-237 (318)
297 3ii7_A Kelch-like protein 7; p 48.4 1E+02 0.0035 29.9 10.8 100 2-103 55-177 (306)
298 1x5b_A Signal transducing adap 48.3 41 0.0014 31.1 7.2 75 488-567 13-91 (163)
299 2xzh_A Clathrin heavy chain 1; 46.7 2.8E+02 0.0094 29.0 15.2 100 1-103 76-188 (365)
300 4asc_A Kelch repeat and BTB do 46.7 85 0.0029 30.8 9.9 100 2-103 98-220 (315)
301 4asc_A Kelch repeat and BTB do 45.8 1E+02 0.0035 30.2 10.3 91 2-94 148-253 (315)
302 3amr_A 3-phytase; beta-propell 45.4 1.8E+02 0.0063 30.2 12.4 98 5-103 145-262 (355)
303 3kya_A Putative phosphatase; s 45.1 2.5E+02 0.0085 30.5 14.0 60 2-62 258-340 (496)
304 3p5b_L Low density lipoprotein 44.6 2.8E+02 0.0096 28.5 17.0 89 13-101 225-317 (400)
305 3m0c_C LDL receptor, low-densi 44.4 4.2E+02 0.014 30.4 17.2 99 3-101 526-629 (791)
306 3sbq_A Nitrous-oxide reductase 44.0 54 0.0019 36.7 8.3 92 1-93 332-454 (638)
307 3qqz_A Putative uncharacterize 43.1 2.5E+02 0.0085 27.5 13.4 61 3-65 39-102 (255)
308 3v9f_A Two-component system se 43.0 1.5E+02 0.0052 33.3 12.4 99 2-103 460-567 (781)
309 3amr_A 3-phytase; beta-propell 41.4 2.5E+02 0.0087 29.1 12.7 97 3-103 40-161 (355)
310 1n7d_A LDL receptor, low-densi 41.2 73 0.0025 36.1 9.3 68 35-102 541-612 (699)
311 1zgk_A Kelch-like ECH-associat 40.4 1.5E+02 0.005 28.9 10.5 100 2-103 168-286 (308)
312 1zgk_A Kelch-like ECH-associat 39.1 1.2E+02 0.0042 29.5 9.7 100 2-103 121-239 (308)
313 1bpo_A Protein (clathrin); cla 38.6 3.5E+02 0.012 29.4 13.4 100 1-103 75-187 (494)
314 1n7d_A LDL receptor, low-densi 38.1 49 0.0017 37.5 7.2 101 3-103 465-570 (699)
315 3ei3_A DNA damage-binding prot 38.0 2.9E+02 0.01 33.3 14.3 98 4-103 524-635 (1158)
316 2woz_A Kelch repeat and BTB do 37.8 1.5E+02 0.0051 29.0 10.1 100 2-103 109-230 (318)
317 1l9l_A Granulysin; saposin fol 37.4 26 0.00089 28.1 3.4 46 524-569 5-62 (74)
318 4a0p_A LRP6, LRP-6, low-densit 35.2 3.9E+02 0.013 29.6 14.0 101 1-103 5-110 (628)
319 3vmx_A Voltage-gated hydrogen 34.9 61 0.0021 24.0 4.6 42 579-623 2-43 (48)
320 1cru_A Protein (soluble quinop 34.8 2.8E+02 0.0096 29.4 12.3 44 1-44 36-87 (454)
321 2woz_A Kelch repeat and BTB do 33.7 1.9E+02 0.0065 28.2 10.1 91 2-94 158-263 (318)
322 4fhn_B Nucleoporin NUP120; pro 33.6 34 0.0012 41.2 5.1 28 2-29 248-275 (1139)
323 3a9g_A Putative uncharacterize 33.2 2.3E+02 0.008 28.7 10.9 62 1-64 38-115 (354)
324 1mhq_A ADP-ribosylation factor 32.7 62 0.0021 29.4 5.6 64 501-569 16-79 (148)
325 1dvp_A HRS, hepatocyte growth 32.4 68 0.0023 30.8 6.2 72 491-567 6-81 (220)
326 4gq2_M Nucleoporin NUP120; bet 31.7 41 0.0014 39.7 5.3 28 2-29 246-273 (950)
327 2qk2_A LP04448P; mini spindles 31.4 2.9E+02 0.0099 25.8 10.7 42 521-562 169-210 (242)
328 3f7f_A Nucleoporin NUP120; nuc 31.4 43 0.0015 38.4 5.2 30 2-31 230-259 (729)
329 1tl2_A L10, protein (tachylect 31.4 1.3E+02 0.0046 29.5 8.1 59 36-97 90-156 (236)
330 3ldz_A STAM-1, signal transduc 29.5 60 0.0021 29.1 4.9 64 500-568 19-82 (140)
331 4gq2_M Nucleoporin NUP120; bet 29.0 78 0.0027 37.3 7.1 39 35-73 237-276 (950)
332 2zwa_A Leucine carboxyl methyl 28.7 3.2E+02 0.011 30.6 12.0 102 2-103 500-634 (695)
333 3g2s_A C-terminal fragment of 28.0 1.2E+02 0.0042 27.4 6.8 63 502-569 27-89 (149)
334 3s94_A LRP-6, low-density lipo 27.3 5.2E+02 0.018 28.5 13.2 101 3-103 96-201 (619)
335 3sbq_A Nitrous-oxide reductase 27.3 65 0.0022 36.1 5.5 70 34-103 323-407 (638)
336 2uvk_A YJHT; unknown function, 26.9 4.3E+02 0.015 25.9 11.5 51 2-53 65-127 (357)
337 3now_A UNC-45 protein, SD10334 26.7 1.2E+02 0.0043 35.1 8.1 79 482-561 42-125 (810)
338 3sre_A PON1, serum paraoxonase 25.5 3.5E+02 0.012 27.9 10.6 59 34-93 221-286 (355)
339 2xbg_A YCF48-like protein; pho 25.4 4.9E+02 0.017 25.6 12.5 94 1-97 172-272 (327)
340 3ei3_A DNA damage-binding prot 23.7 4.2E+02 0.014 31.9 12.2 100 2-104 895-999 (1158)
341 1of9_A Pore-forming peptide am 22.9 1.4E+02 0.0048 23.6 5.5 47 523-569 5-63 (77)
342 3das_A Putative oxidoreductase 22.3 6.4E+02 0.022 25.7 13.4 63 1-63 41-116 (347)
343 4fhn_B Nucleoporin NUP120; pro 22.1 75 0.0026 38.2 5.3 39 35-73 239-278 (1139)
344 3rru_A TOM1L1 protein; structu 21.9 2.1E+02 0.007 26.0 7.0 63 502-569 32-95 (152)
345 3b2a_A TON_1937, putative unch 21.8 2.8E+02 0.0095 27.6 8.3 55 503-557 46-104 (265)
346 2be1_A Serine/threonine-protei 21.5 2.1E+02 0.007 29.5 7.8 101 3-103 10-129 (339)
347 1xqr_A HSPBP1 protein; armadil 21.1 4.1E+02 0.014 26.4 9.9 65 500-564 177-245 (296)
348 2uvk_A YJHT; unknown function, 21.0 4E+02 0.014 26.1 9.9 91 2-94 19-128 (357)
349 3sre_A PON1, serum paraoxonase 20.7 6.3E+02 0.022 25.8 11.5 98 5-103 129-251 (355)
No 1
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.61 E-value=1.1e-14 Score=151.01 Aligned_cols=122 Identities=19% Similarity=0.269 Sum_probs=111.5
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCeeEEEEeccCCceeE
Q 006939 1 MSGYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVDVGWSRLSD 79 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~i~t~~~~~s~v~~ 79 (625)
|||++||+|+.|++|++||+.+++++..+.+|...|.+++|+|++.+|++|+.| .|++||++.+.+...+..+...+..
T Consensus 174 pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~ 253 (321)
T 3ow8_A 174 PDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLN 253 (321)
T ss_dssp TTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEE
T ss_pred CCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEE
Confidence 789999999999999999999999999999999999999999999999999999 9999999999999888888888999
Q ss_pred EEe-cCCCEEEEeeCCCeEEEEeccCCccccccccceeEEeccCCCccccc
Q 006939 80 LNV-HEGKLLGCSYNQSCVGVWVVDISRIEPYTIGSVTRVNGLSESKSSAS 129 (625)
Q Consensus 80 l~~-~dg~lL~sg~~Dg~V~vWdv~~~~~~~~~~~~i~~l~gHs~~v~~~~ 129 (625)
+.| +++.+|++++.|+.|++||+. .+..+..+.+|...+....
T Consensus 254 ~~~sp~~~~l~s~s~D~~v~iwd~~-------~~~~~~~~~~h~~~v~~v~ 297 (321)
T 3ow8_A 254 VAFCPDDTHFVSSSSDKSVKVWDVG-------TRTCVHTFFDHQDQVWGVK 297 (321)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETT-------TTEEEEEECCCSSCEEEEE
T ss_pred EEECCCCCEEEEEeCCCcEEEEeCC-------CCEEEEEEcCCCCcEEEEE
Confidence 998 799999999999999999997 4566777888887765543
No 2
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.60 E-value=1.3e-14 Score=148.45 Aligned_cols=123 Identities=12% Similarity=0.142 Sum_probs=109.4
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCeeEEEEeccCCceeE
Q 006939 1 MSGYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVDVGWSRLSD 79 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~i~t~~~~~s~v~~ 79 (625)
|||.+|++|+.|++|++||+.++.++..+.+|...|.+++|+|++++|++|+.| +|++||+.+++++..+..|...+..
T Consensus 23 p~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~ 102 (304)
T 2ynn_A 23 PTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRS 102 (304)
T ss_dssp SSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEE
T ss_pred CCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEeCCCCcEEE
Confidence 799999999999999999999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred EEe-cCCCEEEEeeCCCeEEEEeccCCccccccccceeEEeccCCCccccc
Q 006939 80 LNV-HEGKLLGCSYNQSCVGVWVVDISRIEPYTIGSVTRVNGLSESKSSAS 129 (625)
Q Consensus 80 l~~-~dg~lL~sg~~Dg~V~vWdv~~~~~~~~~~~~i~~l~gHs~~v~~~~ 129 (625)
+.+ +++.+|++|+.|+.|++||++.. ......+.+|...+....
T Consensus 103 ~~~~~~~~~l~sgs~D~~v~lWd~~~~------~~~~~~~~~h~~~v~~v~ 147 (304)
T 2ynn_A 103 IAVHPTKPYVLSGSDDLTVKLWNWENN------WALEQTFEGHEHFVMCVA 147 (304)
T ss_dssp EEECSSSSEEEEEETTSCEEEEEGGGT------TEEEEEECCCCSCEEEEE
T ss_pred EEEcCCCCEEEEECCCCeEEEEECCCC------cchhhhhcccCCcEEEEE
Confidence 998 78999999999999999998721 123355677877665543
No 3
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.59 E-value=1.1e-14 Score=155.90 Aligned_cols=121 Identities=20% Similarity=0.296 Sum_probs=111.4
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCeeEEEEeccCCceeE
Q 006939 1 MSGYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVDVGWSRLSD 79 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~i~t~~~~~s~v~~ 79 (625)
|++.+|++|+.|++|++||+.+++++..+.+|...|.+++|+|++.+|++|+.| +|+|||+.+++++..+..|...+..
T Consensus 118 p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~ 197 (410)
T 1vyh_C 118 PVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSS 197 (410)
T ss_dssp SSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEE
T ss_pred CCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEE
Confidence 689999999999999999999999999999999999999999999999999999 9999999999999999888889999
Q ss_pred EEe-cCCCEEEEeeCCCeEEEEeccCCccccccccceeEEeccCCCcccc
Q 006939 80 LNV-HEGKLLGCSYNQSCVGVWVVDISRIEPYTIGSVTRVNGLSESKSSA 128 (625)
Q Consensus 80 l~~-~dg~lL~sg~~Dg~V~vWdv~~~~~~~~~~~~i~~l~gHs~~v~~~ 128 (625)
+.| +++.+|++|+.|+.|++||+. .+..+..+.+|..++...
T Consensus 198 v~~~p~~~~l~s~s~D~~i~~wd~~-------~~~~~~~~~~h~~~v~~~ 240 (410)
T 1vyh_C 198 VSIMPNGDHIVSASRDKTIKMWEVQ-------TGYCVKTFTGHREWVRMV 240 (410)
T ss_dssp EEECSSSSEEEEEETTSEEEEEETT-------TCCEEEEEECCSSCEEEE
T ss_pred EEEeCCCCEEEEEeCCCeEEEEECC-------CCcEEEEEeCCCccEEEE
Confidence 998 789999999999999999997 456677888888877554
No 4
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.55 E-value=5.5e-14 Score=150.40 Aligned_cols=122 Identities=23% Similarity=0.367 Sum_probs=109.7
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCeeEEEEeccCCceeE
Q 006939 1 MSGYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVDVGWSRLSD 79 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~i~t~~~~~s~v~~ 79 (625)
|+|.+|++|+.|++|++||+.+++++..+.+|...|.+++|+|++.+|++|+.| +|++||++++.++..+..+...+..
T Consensus 160 ~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~ 239 (410)
T 1vyh_C 160 HSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRM 239 (410)
T ss_dssp TTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEE
T ss_pred CCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEE
Confidence 689999999999999999999999999999999999999999999999999999 9999999999999999888888888
Q ss_pred EEe-cCCCEEEEeeCCCeEEEEeccCCccccccccceeEEeccCCCccccc
Q 006939 80 LNV-HEGKLLGCSYNQSCVGVWVVDISRIEPYTIGSVTRVNGLSESKSSAS 129 (625)
Q Consensus 80 l~~-~dg~lL~sg~~Dg~V~vWdv~~~~~~~~~~~~i~~l~gHs~~v~~~~ 129 (625)
+.+ +++.+|++|+.|+.|++||+. .+.....+.+|...+....
T Consensus 240 ~~~~~~g~~l~s~s~D~~v~vwd~~-------~~~~~~~~~~h~~~v~~~~ 283 (410)
T 1vyh_C 240 VRPNQDGTLIASCSNDQTVRVWVVA-------TKECKAELREHRHVVECIS 283 (410)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETT-------TCCEEEEECCCSSCEEEEE
T ss_pred EEECCCCCEEEEEcCCCeEEEEECC-------CCceeeEecCCCceEEEEE
Confidence 888 789999999999999999987 3445566777776665443
No 5
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.55 E-value=1.3e-13 Score=140.16 Aligned_cols=121 Identities=17% Similarity=0.256 Sum_probs=108.7
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCeeEEEEeccCCceeE
Q 006939 1 MSGYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVDVGWSRLSD 79 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~i~t~~~~~s~v~~ 79 (625)
|+|++|++|+.|++|++||+.+++++..+.+|...|.+++|+|++.+|++|+.| .|++||+++++++..+..+...+..
T Consensus 33 ~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~ 112 (312)
T 4ery_A 33 PNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFC 112 (312)
T ss_dssp TTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEE
T ss_pred CCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEE
Confidence 689999999999999999999999999999999999999999999999999999 9999999999999999888888999
Q ss_pred EEe-cCCCEEEEeeCCCeEEEEeccCCccccccccceeEEeccCCCcccc
Q 006939 80 LNV-HEGKLLGCSYNQSCVGVWVVDISRIEPYTIGSVTRVNGLSESKSSA 128 (625)
Q Consensus 80 l~~-~dg~lL~sg~~Dg~V~vWdv~~~~~~~~~~~~i~~l~gHs~~v~~~ 128 (625)
+.+ +++.+|++++.|+.|++||+. .+..+..+.+|...+...
T Consensus 113 ~~~~~~~~~l~s~~~d~~i~iwd~~-------~~~~~~~~~~~~~~v~~~ 155 (312)
T 4ery_A 113 CNFNPQSNLIVSGSFDESVRIWDVK-------TGKCLKTLPAHSDPVSAV 155 (312)
T ss_dssp EEECSSSSEEEEEETTSCEEEEETT-------TCCEEEEECCCSSCEEEE
T ss_pred EEEcCCCCEEEEEeCCCcEEEEECC-------CCEEEEEecCCCCcEEEE
Confidence 888 789999999999999999987 344556667776665443
No 6
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.55 E-value=1.2e-13 Score=143.33 Aligned_cols=122 Identities=16% Similarity=0.281 Sum_probs=106.8
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCeeEEEEecc--CCce
Q 006939 1 MSGYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVDVG--WSRL 77 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~i~t~~~~--~s~v 77 (625)
|++.+|++|+.|++|++||++++.++..+.+|...|.+++|+|++.+|++|+.| +|++||++.+..+..+... ...+
T Consensus 194 ~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v 273 (340)
T 1got_B 194 PDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGI 273 (340)
T ss_dssp TTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCE
T ss_pred CCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccce
Confidence 689999999999999999999999999999999999999999999999999999 9999999998887665432 2357
Q ss_pred eEEEe-cCCCEEEEeeCCCeEEEEeccCCccccccccceeEEeccCCCccccc
Q 006939 78 SDLNV-HEGKLLGCSYNQSCVGVWVVDISRIEPYTIGSVTRVNGLSESKSSAS 129 (625)
Q Consensus 78 ~~l~~-~dg~lL~sg~~Dg~V~vWdv~~~~~~~~~~~~i~~l~gHs~~v~~~~ 129 (625)
..+.| +++++|++|+.|+.|++||+. ....+..+.+|...+....
T Consensus 274 ~~~~~s~~g~~l~~g~~d~~i~vwd~~-------~~~~~~~~~~h~~~v~~~~ 319 (340)
T 1got_B 274 TSVSFSKSGRLLLAGYDDFNCNVWDAL-------KADRAGVLAGHDNRVSCLG 319 (340)
T ss_dssp EEEEECTTSSEEEEEETTSEEEEEETT-------TCCEEEEEECCSSCEEEEE
T ss_pred EEEEECCCCCEEEEECCCCeEEEEEcc-------cCcEeeEeecCCCcEEEEE
Confidence 78888 799999999999999999987 3456677889988876544
No 7
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.54 E-value=1e-13 Score=145.84 Aligned_cols=122 Identities=16% Similarity=0.176 Sum_probs=103.1
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCC-EEEEEeCC-cEEEEeCCCCeeEEEEe--ccCCc
Q 006939 1 MSGYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGR-TLLCGLHE-SLKVFSWEPIRCHDAVD--VGWSR 76 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~-~LvSgs~D-sIrVWdl~sg~~i~t~~--~~~s~ 76 (625)
|||++|++|+.|++|++||+++++++..+.+|...|.+++|+|++. +|++|+.| +|++||++++++...+. .+...
T Consensus 137 pdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~ 216 (344)
T 4gqb_B 137 SSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYL 216 (344)
T ss_dssp TTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCC
T ss_pred CCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeecc
Confidence 7899999999999999999999999999999999999999999984 78899999 99999999998877653 33445
Q ss_pred eeEEEe-c-CCCEEEEeeCCCeEEEEeccCCccccccccceeEEeccCCCccccc
Q 006939 77 LSDLNV-H-EGKLLGCSYNQSCVGVWVVDISRIEPYTIGSVTRVNGLSESKSSAS 129 (625)
Q Consensus 77 v~~l~~-~-dg~lL~sg~~Dg~V~vWdv~~~~~~~~~~~~i~~l~gHs~~v~~~~ 129 (625)
+..+.+ + ++++|++|+.|+.|++||++ .+..+..+.+|...+....
T Consensus 217 ~~~~~~~p~~~~~l~sg~~dg~v~~wd~~-------~~~~~~~~~~h~~~v~~v~ 264 (344)
T 4gqb_B 217 PTSLAWHPQQSEVFVFGDENGTVSLVDTK-------STSCVLSSAVHSQCVTGLV 264 (344)
T ss_dssp EEEEEECSSCTTEEEEEETTSEEEEEESC-------C--CCEEEECCSSCEEEEE
T ss_pred ceeeeecCCCCcceEEeccCCcEEEEECC-------CCcEEEEEcCCCCCEEEEE
Confidence 667776 3 67789999999999999998 4567788899988876554
No 8
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.54 E-value=8.8e-14 Score=144.08 Aligned_cols=103 Identities=16% Similarity=0.217 Sum_probs=98.2
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCeeEEEEeccCCceeE
Q 006939 1 MSGYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVDVGWSRLSD 79 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~i~t~~~~~s~v~~ 79 (625)
|||.+|++|+.|++|++||+.+++++..+.+|...|.+++|+|++.+|++|+.| +|+|||+.+++++..+..+...+..
T Consensus 216 pd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~ 295 (321)
T 3ow8_A 216 PDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWG 295 (321)
T ss_dssp TTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEE
T ss_pred CCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEE
Confidence 789999999999999999999999999999999999999999999999999999 9999999999999999888889999
Q ss_pred EEe-cCCCEEEEeeCCCeEEEEecc
Q 006939 80 LNV-HEGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 80 l~~-~dg~lL~sg~~Dg~V~vWdv~ 103 (625)
+.| +++.+|++++.|+.|++||..
T Consensus 296 v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 296 VKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp EEECTTSSEEEEEETTCCEEEEECC
T ss_pred EEECCCCCEEEEEeCCCeEEEEeCC
Confidence 998 789999999999999999863
No 9
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.52 E-value=1.4e-13 Score=141.78 Aligned_cols=119 Identities=15% Similarity=0.180 Sum_probs=105.0
Q ss_pred CCEEEEEeCCCeEEEEECCC-----CeEEEEeCCCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCeeEEEEeccCCc
Q 006939 3 GYFHFSGSADRTVKFWDLET-----FELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVDVGWSR 76 (625)
Q Consensus 3 G~lLASGS~D~tVkIWDL~t-----g~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~i~t~~~~~s~ 76 (625)
+.+|+||+.|++|++||+.. +..+..+.+|...|.+++|+|+|.+|++|+.| +|+|||+.+++++..+..|...
T Consensus 30 ~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~ 109 (319)
T 3frx_A 30 PNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSD 109 (319)
T ss_dssp TTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSC
T ss_pred ccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCc
Confidence 48999999999999999864 34577899999999999999999999999999 9999999999999999999999
Q ss_pred eeEEEe-cCCCEEEEeeCCCeEEEEeccCCccccccccceeEEeccCCCccccc
Q 006939 77 LSDLNV-HEGKLLGCSYNQSCVGVWVVDISRIEPYTIGSVTRVNGLSESKSSAS 129 (625)
Q Consensus 77 v~~l~~-~dg~lL~sg~~Dg~V~vWdv~~~~~~~~~~~~i~~l~gHs~~v~~~~ 129 (625)
+..+.+ +++.+|++|+.|+.|++||++ +..+..+.+|...+....
T Consensus 110 v~~~~~~~~~~~l~s~s~D~~i~vwd~~--------~~~~~~~~~h~~~v~~~~ 155 (319)
T 3frx_A 110 VMSVDIDKKASMIISGSRDKTIKVWTIK--------GQCLATLLGHNDWVSQVR 155 (319)
T ss_dssp EEEEEECTTSCEEEEEETTSCEEEEETT--------SCEEEEECCCSSCEEEEE
T ss_pred EEEEEEcCCCCEEEEEeCCCeEEEEECC--------CCeEEEEeccCCcEEEEE
Confidence 999998 789999999999999999986 345667778877765543
No 10
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.52 E-value=2.1e-13 Score=139.45 Aligned_cols=103 Identities=15% Similarity=0.256 Sum_probs=95.0
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCC-eeEEEEeccCCcee
Q 006939 1 MSGYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPI-RCHDAVDVGWSRLS 78 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg-~~i~t~~~~~s~v~ 78 (625)
|++.+|++|+.|++|++||+.+++++..+.+|...|.+++|+|++.+|++|+.| +|++||++.+ .+...+..|...+.
T Consensus 65 ~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~ 144 (304)
T 2ynn_A 65 ARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVM 144 (304)
T ss_dssp GGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEE
T ss_pred CCCCEEEEECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEE
Confidence 578999999999999999999999999999999999999999999999999999 9999999887 45567778888899
Q ss_pred EEEe-c-CCCEEEEeeCCCeEEEEecc
Q 006939 79 DLNV-H-EGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 79 ~l~~-~-dg~lL~sg~~Dg~V~vWdv~ 103 (625)
.+.| + ++.+|++|+.|+.|++||+.
T Consensus 145 ~v~~~p~~~~~l~sgs~D~~v~iwd~~ 171 (304)
T 2ynn_A 145 CVAFNPKDPSTFASGCLDRTVKVWSLG 171 (304)
T ss_dssp EEEECTTCTTEEEEEETTSEEEEEETT
T ss_pred EEEECCCCCCEEEEEeCCCeEEEEECC
Confidence 9998 4 67899999999999999986
No 11
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.51 E-value=3.5e-13 Score=139.50 Aligned_cols=124 Identities=19% Similarity=0.238 Sum_probs=99.6
Q ss_pred CCCCEEEEEeCCCeEEEEECC-------CCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCC----CeeEE
Q 006939 1 MSGYFHFSGSADRTVKFWDLE-------TFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEP----IRCHD 68 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~-------tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~s----g~~i~ 68 (625)
|+|.+||+|+.|++|+|||+. ..+++..+.+|...|.+++|+|+|.+|++|+.| +|++||+.. .+++.
T Consensus 68 p~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~ 147 (330)
T 2hes_X 68 PHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECIS 147 (330)
T ss_dssp TTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEE
T ss_pred CCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEE
Confidence 789999999999999999985 346778899999999999999999999999999 999999943 35677
Q ss_pred EEeccCCceeEEEe-cCCCEEEEeeCCCeEEEEeccCCccccccccceeEEeccCCCccccc
Q 006939 69 AVDVGWSRLSDLNV-HEGKLLGCSYNQSCVGVWVVDISRIEPYTIGSVTRVNGLSESKSSAS 129 (625)
Q Consensus 69 t~~~~~s~v~~l~~-~dg~lL~sg~~Dg~V~vWdv~~~~~~~~~~~~i~~l~gHs~~v~~~~ 129 (625)
.+..|...+..+.| +++.+|++++.|+.|++||.... ....+..+.+|...+....
T Consensus 148 ~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~-----~~~~~~~~~~h~~~v~~~~ 204 (330)
T 2hes_X 148 VLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDD-----DWECVAVLNGHEGTVWSSD 204 (330)
T ss_dssp EECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETT-----EEEEEEEECCCSSCEEEEE
T ss_pred EeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCC-----CeeEEEEccCCCCcEEEEE
Confidence 77788888999998 79999999999999999997611 1135667788887765543
No 12
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.50 E-value=4e-13 Score=140.82 Aligned_cols=121 Identities=20% Similarity=0.328 Sum_probs=104.7
Q ss_pred CCCEEEEEeCCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCeeEEEEecc--CCcee
Q 006939 2 SGYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVDVG--WSRLS 78 (625)
Q Consensus 2 dG~lLASGS~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~i~t~~~~--~s~v~ 78 (625)
+|.+|++|+.|++|++||+++++++..+.+|...|.+++|+|++.+|++|+.| +|++||++.+++...+..+ ...+.
T Consensus 209 ~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~ 288 (354)
T 2pbi_B 209 TGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGAS 288 (354)
T ss_dssp SCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEE
T ss_pred CCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCccccee
Confidence 57899999999999999999999999999999999999999999999999999 9999999998877665432 23456
Q ss_pred EEEe-cCCCEEEEeeCCCeEEEEeccCCccccccccceeEEeccCCCccccc
Q 006939 79 DLNV-HEGKLLGCSYNQSCVGVWVVDISRIEPYTIGSVTRVNGLSESKSSAS 129 (625)
Q Consensus 79 ~l~~-~dg~lL~sg~~Dg~V~vWdv~~~~~~~~~~~~i~~l~gHs~~v~~~~ 129 (625)
.+.| +++.+|++|+.|+.|++||+. .+..+..+.+|...+....
T Consensus 289 ~~~~s~~g~~l~~g~~d~~i~vwd~~-------~~~~~~~l~~h~~~v~~l~ 333 (354)
T 2pbi_B 289 SVDFSLSGRLLFAGYNDYTINVWDVL-------KGSRVSILFGHENRVSTLR 333 (354)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETT-------TCSEEEEECCCSSCEEEEE
T ss_pred EEEEeCCCCEEEEEECCCcEEEEECC-------CCceEEEEECCCCcEEEEE
Confidence 7777 799999999999999999986 4556677888988776554
No 13
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.50 E-value=3.6e-13 Score=139.83 Aligned_cols=102 Identities=13% Similarity=0.119 Sum_probs=95.0
Q ss_pred CCCEEEEEeCCCeEEEEECCC-------CeEEEEeCCCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCeeEEEEecc
Q 006939 2 SGYFHFSGSADRTVKFWDLET-------FELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVDVG 73 (625)
Q Consensus 2 dG~lLASGS~D~tVkIWDL~t-------g~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~i~t~~~~ 73 (625)
|+.+|+||+.|++|++||+.+ +.....+.+|...|.+++|+|++.++++|+.| +|++||+++++++..+..|
T Consensus 38 d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h 117 (343)
T 2xzm_R 38 DSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGH 117 (343)
T ss_dssp CCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECC
T ss_pred CCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCC
Confidence 889999999999999999974 34677889999999999999999999999999 9999999999999999889
Q ss_pred CCceeEEEe-cCCCEEEEeeCCCeEEEEecc
Q 006939 74 WSRLSDLNV-HEGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 74 ~s~v~~l~~-~dg~lL~sg~~Dg~V~vWdv~ 103 (625)
...+..+.| +++++|++++.|+.|++||+.
T Consensus 118 ~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~ 148 (343)
T 2xzm_R 118 QSEVYSVAFSPDNRQILSAGAEREIKLWNIL 148 (343)
T ss_dssp CSCEEEEEECSSTTEEEEEETTSCEEEEESS
T ss_pred CCcEEEEEECCCCCEEEEEcCCCEEEEEecc
Confidence 899999998 799999999999999999986
No 14
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.49 E-value=5e-13 Score=137.74 Aligned_cols=121 Identities=17% Similarity=0.280 Sum_probs=103.0
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCeeEEEEeccCCceeE
Q 006939 1 MSGYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVDVGWSRLSD 79 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~i~t~~~~~s~v~~ 79 (625)
|+|.+|++|+.|++|++||+.+++++..+.+|...|.+++|+|++.+|++|+.| +|++||++ +.++..+..+...+..
T Consensus 75 ~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~~ 153 (319)
T 3frx_A 75 ADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQ 153 (319)
T ss_dssp TTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEE
T ss_pred CCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEEeccCCcEEE
Confidence 689999999999999999999999999999999999999999999999999999 99999997 5666777777777888
Q ss_pred EEe-c------CCCEEEEeeCCCeEEEEeccCCccccccccceeEEeccCCCccccc
Q 006939 80 LNV-H------EGKLLGCSYNQSCVGVWVVDISRIEPYTIGSVTRVNGLSESKSSAS 129 (625)
Q Consensus 80 l~~-~------dg~lL~sg~~Dg~V~vWdv~~~~~~~~~~~~i~~l~gHs~~v~~~~ 129 (625)
+.+ + ++.++++++.|+.|++||+. .......+.+|...+....
T Consensus 154 ~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~-------~~~~~~~~~~h~~~v~~~~ 203 (319)
T 3frx_A 154 VRVVPNEKADDDSVTIISAGNDKMVKAWNLN-------QFQIEADFIGHNSNINTLT 203 (319)
T ss_dssp EEECCC------CCEEEEEETTSCEEEEETT-------TTEEEEEECCCCSCEEEEE
T ss_pred EEEccCCCCCCCccEEEEEeCCCEEEEEECC-------cchhheeecCCCCcEEEEE
Confidence 877 3 35589999999999999987 3344556777877665543
No 15
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.49 E-value=4.3e-13 Score=139.70 Aligned_cols=124 Identities=19% Similarity=0.271 Sum_probs=102.5
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCeEEE---EeCCCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCC--eeEEEEeccC
Q 006939 1 MSGYFHFSGSADRTVKFWDLETFELIG---SAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPI--RCHDAVDVGW 74 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~tg~~i~---tl~~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg--~~i~t~~~~~ 74 (625)
|||.+||+|+.|++|+|||+.++..+. ...+|...|.+++|+|+|.+|++|+.| ++++|++..+ .++..+..|.
T Consensus 26 p~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~ 105 (345)
T 3fm0_A 26 PAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHE 105 (345)
T ss_dssp TTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCS
T ss_pred CCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCC
Confidence 789999999999999999999886432 237899999999999999999999999 9999999876 4667778888
Q ss_pred CceeEEEe-cCCCEEEEeeCCCeEEEEeccCCccccccccceeEEeccCCCcccc
Q 006939 75 SRLSDLNV-HEGKLLGCSYNQSCVGVWVVDISRIEPYTIGSVTRVNGLSESKSSA 128 (625)
Q Consensus 75 s~v~~l~~-~dg~lL~sg~~Dg~V~vWdv~~~~~~~~~~~~i~~l~gHs~~v~~~ 128 (625)
..|..+.| +++++|++++.|+.|++||++... ....+..+.+|...+...
T Consensus 106 ~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~----~~~~~~~~~~h~~~v~~~ 156 (345)
T 3fm0_A 106 NEVKSVAWAPSGNLLATCSRDKSVWVWEVDEED----EYECVSVLNSHTQDVKHV 156 (345)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEEECTTS----CEEEEEEECCCCSCEEEE
T ss_pred CCceEEEEeCCCCEEEEEECCCeEEEEECCCCC----CeEEEEEecCcCCCeEEE
Confidence 89999998 799999999999999999987211 112345566777665543
No 16
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.47 E-value=1.3e-12 Score=132.81 Aligned_cols=103 Identities=19% Similarity=0.405 Sum_probs=98.1
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCeeEEEEeccCCceeE
Q 006939 1 MSGYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVDVGWSRLSD 79 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~i~t~~~~~s~v~~ 79 (625)
|+|++|++|+.|++|++||+.+++++..+.+|...|.++.|+|++.++++|+.| .|++||+++++++..+..+...+..
T Consensus 75 ~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~ 154 (312)
T 4ery_A 75 SDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSA 154 (312)
T ss_dssp TTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEE
T ss_pred CCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEE
Confidence 689999999999999999999999999999999999999999999999999999 9999999999999888888888999
Q ss_pred EEe-cCCCEEEEeeCCCeEEEEecc
Q 006939 80 LNV-HEGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 80 l~~-~dg~lL~sg~~Dg~V~vWdv~ 103 (625)
+.+ +++.+|++++.|+.|++||+.
T Consensus 155 ~~~~~~~~~l~~~~~d~~i~~wd~~ 179 (312)
T 4ery_A 155 VHFNRDGSLIVSSSYDGLCRIWDTA 179 (312)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETT
T ss_pred EEEcCCCCEEEEEeCCCcEEEEECC
Confidence 988 789999999999999999987
No 17
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.47 E-value=5.5e-13 Score=140.81 Aligned_cols=102 Identities=22% Similarity=0.361 Sum_probs=90.9
Q ss_pred CCCEEEEEeCCCeEEEEECC-CCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCeeEEEEeccC-----
Q 006939 2 SGYFHFSGSADRTVKFWDLE-TFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVDVGW----- 74 (625)
Q Consensus 2 dG~lLASGS~D~tVkIWDL~-tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~i~t~~~~~----- 74 (625)
++.+|++|+.|++|++||++ .++++..+.+|...|.+++|+|+|.+|++|+.| +|++||++++.++..+..+.
T Consensus 217 ~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~ 296 (380)
T 3iz6_a 217 NANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDN 296 (380)
T ss_dssp SCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCC
T ss_pred CCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEeccccccccc
Confidence 68899999999999999998 557888999999999999999999999999999 99999999999887765432
Q ss_pred --CceeEEEe-cCCCEEEEeeCCCeEEEEecc
Q 006939 75 --SRLSDLNV-HEGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 75 --s~v~~l~~-~dg~lL~sg~~Dg~V~vWdv~ 103 (625)
..+..+.| +++.+|++|+.|+.|++||+.
T Consensus 297 ~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~ 328 (380)
T 3iz6_a 297 ELPIVTSVAFSISGRLLFAGYSNGDCYVWDTL 328 (380)
T ss_dssp SSCSCSEEEECSSSSEEEEECTTSCEEEEETT
T ss_pred ccCceEEEEECCCCCEEEEEECCCCEEEEECC
Confidence 23667777 799999999999999999986
No 18
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.46 E-value=1.3e-12 Score=138.58 Aligned_cols=102 Identities=20% Similarity=0.475 Sum_probs=93.1
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCeeEEEEeccCCceeE
Q 006939 1 MSGYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVDVGWSRLSD 79 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~i~t~~~~~s~v~~ 79 (625)
|||++|++|+.|++|++||+.+++++..+.+|...|.+++|+|++.+|++|+.| +|++||++++++...+..+ ..+..
T Consensus 133 ~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~-~~v~~ 211 (393)
T 1erj_A 133 PDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIE-DGVTT 211 (393)
T ss_dssp TTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECS-SCEEE
T ss_pred CCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEcC-CCcEE
Confidence 689999999999999999999999999999999999999999999999999999 9999999999988777644 44666
Q ss_pred EEe-c-CCCEEEEeeCCCeEEEEecc
Q 006939 80 LNV-H-EGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 80 l~~-~-dg~lL~sg~~Dg~V~vWdv~ 103 (625)
+.+ + ++.+|++|+.|+.|++||+.
T Consensus 212 ~~~~~~~~~~l~~~s~d~~v~iwd~~ 237 (393)
T 1erj_A 212 VAVSPGDGKYIAAGSLDRAVRVWDSE 237 (393)
T ss_dssp EEECSTTCCEEEEEETTSCEEEEETT
T ss_pred EEEECCCCCEEEEEcCCCcEEEEECC
Confidence 666 4 89999999999999999987
No 19
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.45 E-value=1e-12 Score=137.73 Aligned_cols=103 Identities=20% Similarity=0.354 Sum_probs=96.9
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcC--CCCEEEEEeCC-cEEEEeCCCCeeEEEEeccCCce
Q 006939 1 MSGYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNP--DGRTLLCGLHE-SLKVFSWEPIRCHDAVDVGWSRL 77 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsP--dg~~LvSgs~D-sIrVWdl~sg~~i~t~~~~~s~v 77 (625)
|++..|++|+.|++|++||+++++++..+.+|...|.++.|+| +|.+|++|+.| .|++||+++++++..+..|...+
T Consensus 164 ~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v 243 (354)
T 2pbi_B 164 NSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDV 243 (354)
T ss_dssp SSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCE
T ss_pred CCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCe
Confidence 5788999999999999999999999999999999999999987 57899999999 99999999999999998888899
Q ss_pred eEEEe-cCCCEEEEeeCCCeEEEEecc
Q 006939 78 SDLNV-HEGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 78 ~~l~~-~dg~lL~sg~~Dg~V~vWdv~ 103 (625)
..+.+ +++.+|++++.|+.|++||++
T Consensus 244 ~~v~~~p~~~~l~s~s~D~~v~lwd~~ 270 (354)
T 2pbi_B 244 NSVRYYPSGDAFASGSDDATCRLYDLR 270 (354)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred EEEEEeCCCCEEEEEeCCCeEEEEECC
Confidence 99998 799999999999999999987
No 20
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.45 E-value=1.1e-12 Score=136.64 Aligned_cols=124 Identities=15% Similarity=0.204 Sum_probs=103.8
Q ss_pred CCCCEEEEEeCCCeEEEEECCCC--eEEEEeCCCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCC---eeEEEEeccC
Q 006939 1 MSGYFHFSGSADRTVKFWDLETF--ELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPI---RCHDAVDVGW 74 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~tg--~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg---~~i~t~~~~~ 74 (625)
|+|.+||+|+.|++|+|||+.++ +++..+.+|...|.+++|+|++.+|++|+.| +|++||+..+ .++..+..+.
T Consensus 71 p~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~ 150 (345)
T 3fm0_A 71 PCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHT 150 (345)
T ss_dssp TTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCC
T ss_pred CCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcC
Confidence 78999999999999999999876 4678899999999999999999999999999 9999999875 4556667777
Q ss_pred CceeEEEe-cCCCEEEEeeCCCeEEEEeccCCccccccccceeEEeccCCCccccc
Q 006939 75 SRLSDLNV-HEGKLLGCSYNQSCVGVWVVDISRIEPYTIGSVTRVNGLSESKSSAS 129 (625)
Q Consensus 75 s~v~~l~~-~dg~lL~sg~~Dg~V~vWdv~~~~~~~~~~~~i~~l~gHs~~v~~~~ 129 (625)
..+..+.+ +++.+|++++.|+.|++||..... ......+.+|...+....
T Consensus 151 ~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~-----~~~~~~~~~h~~~v~~l~ 201 (345)
T 3fm0_A 151 QDVKHVVWHPSQELLASASYDDTVKLYREEEDD-----WVCCATLEGHESTVWSLA 201 (345)
T ss_dssp SCEEEEEECSSSSCEEEEETTSCEEEEEEETTE-----EEEEEEECCCSSCEEEEE
T ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEEecCCC-----EEEEEEecCCCCceEEEE
Confidence 88889988 789999999999999999986211 123456778877765543
No 21
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.45 E-value=1.2e-12 Score=137.69 Aligned_cols=103 Identities=15% Similarity=0.205 Sum_probs=98.0
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCeeEEEEeccCCceeE
Q 006939 1 MSGYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVDVGWSRLSD 79 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~i~t~~~~~s~v~~ 79 (625)
|+|.+|++|+.|++|++||+.+++++..+.+|...|.+++|+|++.+|++|+.| .|++||+..++++..+..+...+..
T Consensus 107 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~ 186 (420)
T 3vl1_A 107 LQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTD 186 (420)
T ss_dssp SSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEE
T ss_pred cCCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEE
Confidence 689999999999999999999999999999999999999999999999999999 9999999999999888888899999
Q ss_pred EEe-cCCCEEEEeeCCCeEEEEecc
Q 006939 80 LNV-HEGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 80 l~~-~dg~lL~sg~~Dg~V~vWdv~ 103 (625)
+.+ +++.+|++++.|+.|++||+.
T Consensus 187 ~~~~~~~~~l~s~~~d~~v~iwd~~ 211 (420)
T 3vl1_A 187 IAIIDRGRNVLSASLDGTIRLWECG 211 (420)
T ss_dssp EEEETTTTEEEEEETTSCEEEEETT
T ss_pred EEEcCCCCEEEEEcCCCcEEEeECC
Confidence 998 799999999999999999987
No 22
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.45 E-value=1.3e-12 Score=135.14 Aligned_cols=103 Identities=17% Similarity=0.282 Sum_probs=92.5
Q ss_pred CCCCEEEEEeCCCeEEEEECCC----CeEEEEeCCCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCC--eeEEEEecc
Q 006939 1 MSGYFHFSGSADRTVKFWDLET----FELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPI--RCHDAVDVG 73 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~t----g~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg--~~i~t~~~~ 73 (625)
|+|++||+|+.|++|++||+.. .+++..+.+|...|.+++|+|++.+|++|+.| +|++||...+ +++..+..|
T Consensus 117 p~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h 196 (330)
T 2hes_X 117 NDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGH 196 (330)
T ss_dssp TTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCC
T ss_pred CCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCC
Confidence 7899999999999999999943 36788899999999999999999999999999 9999999876 677888888
Q ss_pred CCceeEEEe-cC--CCEEEEeeCCCeEEEEecc
Q 006939 74 WSRLSDLNV-HE--GKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 74 ~s~v~~l~~-~d--g~lL~sg~~Dg~V~vWdv~ 103 (625)
...+..+.| ++ +.+|++++.|+.|++||+.
T Consensus 197 ~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~ 229 (330)
T 2hes_X 197 EGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYM 229 (330)
T ss_dssp SSCEEEEEECCSSSSCEEEEEETTSCEEEEEEE
T ss_pred CCcEEEEEecCCCCeeEEEEEeCCCeEEEEEec
Confidence 888999988 45 6789999999999999986
No 23
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.44 E-value=1.7e-12 Score=137.70 Aligned_cols=121 Identities=20% Similarity=0.281 Sum_probs=102.9
Q ss_pred CCCEEEEEeCCCeEEEEECCCCeEEEEe-------CCCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCC----------
Q 006939 2 SGYFHFSGSADRTVKFWDLETFELIGSA-------GPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEP---------- 63 (625)
Q Consensus 2 dG~lLASGS~D~tVkIWDL~tg~~i~tl-------~~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~s---------- 63 (625)
+|.+|++|+.|++|++||+.++.++..+ .+|...|.+++|+|+|.+|++|+.| .|++||+..
T Consensus 218 ~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~ 297 (393)
T 1erj_A 218 DGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTP 297 (393)
T ss_dssp TCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC------------
T ss_pred CCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCC
Confidence 7899999999999999999999988776 6799999999999999999999999 999999975
Q ss_pred --CeeEEEEeccCCceeEEEe-cCCCEEEEeeCCCeEEEEeccCCccccccccceeEEeccCCCccccc
Q 006939 64 --IRCHDAVDVGWSRLSDLNV-HEGKLLGCSYNQSCVGVWVVDISRIEPYTIGSVTRVNGLSESKSSAS 129 (625)
Q Consensus 64 --g~~i~t~~~~~s~v~~l~~-~dg~lL~sg~~Dg~V~vWdv~~~~~~~~~~~~i~~l~gHs~~v~~~~ 129 (625)
+.|...+..|...+..+.+ +++.+|++|+.|+.|++||+. .+..+..+.+|...+....
T Consensus 298 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~-------~~~~~~~l~~h~~~v~~v~ 359 (393)
T 1erj_A 298 NSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKK-------SGNPLLMLQGHRNSVISVA 359 (393)
T ss_dssp ---CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETT-------TCCEEEEEECCSSCEEEEE
T ss_pred CCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECC-------CCeEEEEECCCCCCEEEEE
Confidence 3455566677778888888 789999999999999999987 4566778889988776543
No 24
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.44 E-value=1e-12 Score=138.02 Aligned_cols=100 Identities=11% Similarity=0.155 Sum_probs=90.1
Q ss_pred CEEEEEeCCCeEEEEECCCCeEEEE----eCCCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCeeEEEEeccCCcee
Q 006939 4 YFHFSGSADRTVKFWDLETFELIGS----AGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVDVGWSRLS 78 (625)
Q Consensus 4 ~lLASGS~D~tVkIWDL~tg~~i~t----l~~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~i~t~~~~~s~v~ 78 (625)
..|++|+.|++|+|||+.+++++.. +.+|...|.+++|+|+|.+|++|+.| +|++||+++++++..+..|...|.
T Consensus 94 ~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~ 173 (344)
T 4gqb_B 94 RGILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVT 173 (344)
T ss_dssp TEEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEE
T ss_pred CeEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceE
Confidence 4678999999999999999876443 45899999999999999999999999 999999999999999999999999
Q ss_pred EEEe-cCC-CEEEEeeCCCeEEEEecc
Q 006939 79 DLNV-HEG-KLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 79 ~l~~-~dg-~lL~sg~~Dg~V~vWdv~ 103 (625)
.+.| +++ .+|++++.|+.|++||++
T Consensus 174 ~~~~~~~~~~~l~s~s~D~~v~iwd~~ 200 (344)
T 4gqb_B 174 CVAASPHKDSVFLSCSEDNRILLWDTR 200 (344)
T ss_dssp EEEECSSCTTEEEEEETTSCEEEEETT
T ss_pred EEEecCCCCCceeeecccccccccccc
Confidence 9998 555 578999999999999987
No 25
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.43 E-value=2.4e-12 Score=133.64 Aligned_cols=122 Identities=18% Similarity=0.231 Sum_probs=104.5
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCC----eeEEEEeccCC
Q 006939 1 MSGYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPI----RCHDAVDVGWS 75 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg----~~i~t~~~~~s 75 (625)
|||.+|++|+.|++|++||+.+++.+..+..|...|.+++|+|+|.++++|+.| .+++|++.++ .....+..|..
T Consensus 65 ~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~ 144 (340)
T 1got_B 65 TDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTG 144 (340)
T ss_dssp TTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSS
T ss_pred CCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCc
Confidence 689999999999999999999999999999999999999999999999999999 9999999865 34556667778
Q ss_pred ceeEEEecCCCEEEEeeCCCeEEEEeccCCccccccccceeEEeccCCCccccc
Q 006939 76 RLSDLNVHEGKLLGCSYNQSCVGVWVVDISRIEPYTIGSVTRVNGLSESKSSAS 129 (625)
Q Consensus 76 ~v~~l~~~dg~lL~sg~~Dg~V~vWdv~~~~~~~~~~~~i~~l~gHs~~v~~~~ 129 (625)
.+..+.+..+..+++++.|+.|++||+. .+..+..+.+|...+....
T Consensus 145 ~v~~~~~~~~~~l~s~s~d~~i~~wd~~-------~~~~~~~~~~h~~~v~~~~ 191 (340)
T 1got_B 145 YLSCCRFLDDNQIVTSSGDTTCALWDIE-------TGQQTTTFTGHTGDVMSLS 191 (340)
T ss_dssp CEEEEEEEETTEEEEEETTSCEEEEETT-------TTEEEEEECCCSSCEEEEE
T ss_pred cEEEEEECCCCcEEEEECCCcEEEEECC-------CCcEEEEEcCCCCceEEEE
Confidence 8888888555568899999999999987 4556677788887765543
No 26
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.43 E-value=2.5e-12 Score=133.39 Aligned_cols=120 Identities=19% Similarity=0.216 Sum_probs=97.5
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCeeEEEEe---ccCCc
Q 006939 1 MSGYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVD---VGWSR 76 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~i~t~~---~~~s~ 76 (625)
|++.+|++|+.|++|++||+++++++..+.+|...|.+++|+|++.+|++|+.| +|++||+.. .+..... .+...
T Consensus 86 ~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~-~~~~~~~~~~~~~~~ 164 (343)
T 2xzm_R 86 QENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILG-ECKFSSAEKENHSDW 164 (343)
T ss_dssp SSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSS-CEEEECCTTTSCSSC
T ss_pred CCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccC-CceeeeecccCCCce
Confidence 688999999999999999999999999999999999999999999999999999 999999984 3332222 35556
Q ss_pred eeEEEe-cCC----------CEEEEeeCCCeEEEEeccCCccccccccceeEEeccCCCccccc
Q 006939 77 LSDLNV-HEG----------KLLGCSYNQSCVGVWVVDISRIEPYTIGSVTRVNGLSESKSSAS 129 (625)
Q Consensus 77 v~~l~~-~dg----------~lL~sg~~Dg~V~vWdv~~~~~~~~~~~~i~~l~gHs~~v~~~~ 129 (625)
+..+.+ +++ .+|++++.|+.|++||.. ......+.+|...+....
T Consensus 165 v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~--------~~~~~~~~~h~~~v~~~~ 220 (343)
T 2xzm_R 165 VSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTN--------FQIRYTFKAHESNVNHLS 220 (343)
T ss_dssp EEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETT--------TEEEEEEECCSSCEEEEE
T ss_pred eeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCC--------CceeEEEcCccccceEEE
Confidence 777777 443 689999999999999954 234556677877665443
No 27
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.42 E-value=2.1e-12 Score=131.51 Aligned_cols=123 Identities=17% Similarity=0.139 Sum_probs=99.3
Q ss_pred CCCCEEEEEeCCCeEEEEECCC--CeEEEEeCCCCCCeEEEEEcCC--CCEEEEEeCC-cEEEEeCCCCe--eEEEEecc
Q 006939 1 MSGYFHFSGSADRTVKFWDLET--FELIGSAGPETSGVRCLTFNPD--GRTLLCGLHE-SLKVFSWEPIR--CHDAVDVG 73 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~t--g~~i~tl~~h~~~V~sv~fsPd--g~~LvSgs~D-sIrVWdl~sg~--~i~t~~~~ 73 (625)
|+|++||+|+.|++|+|||+.. ++++.++.+|...|.+++|+++ +.+|++|+.| +|+|||++++. ++..+..+
T Consensus 19 ~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h 98 (297)
T 2pm7_B 19 YYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHAVH 98 (297)
T ss_dssp TTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEECCC
T ss_pred CCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEeecC
Confidence 6899999999999999999974 4678899999999999999863 8999999999 99999999875 44556667
Q ss_pred CCceeEEEe-cC--CCEEEEeeCCCeEEEEeccCCccccccccceeEEeccCCCcccc
Q 006939 74 WSRLSDLNV-HE--GKLLGCSYNQSCVGVWVVDISRIEPYTIGSVTRVNGLSESKSSA 128 (625)
Q Consensus 74 ~s~v~~l~~-~d--g~lL~sg~~Dg~V~vWdv~~~~~~~~~~~~i~~l~gHs~~v~~~ 128 (625)
...+.++.| ++ +.+|++++.|+.|++||++.... .....+.+|...+...
T Consensus 99 ~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~-----~~~~~~~~h~~~v~~~ 151 (297)
T 2pm7_B 99 SASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGT-----TSPIIIDAHAIGVNSA 151 (297)
T ss_dssp SSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSC-----BCCEEEECCSSCEEEE
T ss_pred CCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCc-----eeeeeeecccCccceE
Confidence 778889988 44 78999999999999999872210 1134566776665543
No 28
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.41 E-value=2.5e-12 Score=135.79 Aligned_cols=116 Identities=19% Similarity=0.170 Sum_probs=101.0
Q ss_pred CCCEEEEEeCCCeEEEEECCCC-------eEEEEeCCCCCCeEEEEEcCCC-CEEEEEeCC-cEEEEeCCCCeeEEEE--
Q 006939 2 SGYFHFSGSADRTVKFWDLETF-------ELIGSAGPETSGVRCLTFNPDG-RTLLCGLHE-SLKVFSWEPIRCHDAV-- 70 (625)
Q Consensus 2 dG~lLASGS~D~tVkIWDL~tg-------~~i~tl~~h~~~V~sv~fsPdg-~~LvSgs~D-sIrVWdl~sg~~i~t~-- 70 (625)
++.+|++|+.|++|++||+.++ +.+..+.+|...|.+++|+|++ .+|++|+.| .|++||++++++...+
T Consensus 93 ~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 172 (402)
T 2aq5_A 93 NDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGP 172 (402)
T ss_dssp CTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECT
T ss_pred CCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEec
Confidence 7899999999999999999988 5678889999999999999998 699999998 9999999999999888
Q ss_pred eccCCceeEEEe-cCCCEEEEeeCCCeEEEEeccCCccccccccceeEE-eccCCC
Q 006939 71 DVGWSRLSDLNV-HEGKLLGCSYNQSCVGVWVVDISRIEPYTIGSVTRV-NGLSES 124 (625)
Q Consensus 71 ~~~~s~v~~l~~-~dg~lL~sg~~Dg~V~vWdv~~~~~~~~~~~~i~~l-~gHs~~ 124 (625)
..+...+..+.+ +++.+|++++.|+.|++||++ .+..+..+ .+|...
T Consensus 173 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~-------~~~~~~~~~~~~~~~ 221 (402)
T 2aq5_A 173 DVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPR-------KGTVVAEKDRPHEGT 221 (402)
T ss_dssp TTCCSCEEEEEECTTSSCEEEEETTSEEEEEETT-------TTEEEEEEECSSCSS
T ss_pred CCCCCceEEEEECCCCCEEEEEecCCcEEEEeCC-------CCceeeeeccCCCCC
Confidence 677888999998 699999999999999999987 23444444 455543
No 29
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.40 E-value=2.2e-12 Score=136.13 Aligned_cols=103 Identities=20% Similarity=0.251 Sum_probs=92.3
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCeEEEEeCCCCC-------CeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCeeEEEE--
Q 006939 1 MSGYFHFSGSADRTVKFWDLETFELIGSAGPETS-------GVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAV-- 70 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~tg~~i~tl~~h~~-------~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~i~t~-- 70 (625)
|+|.+|++|+.|++|++||+++++++..+..+.. .|.+++|+|+|.++++|+.| .|++||...+++...+
T Consensus 259 p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~ 338 (380)
T 3iz6_a 259 PDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGT 338 (380)
T ss_dssp TTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECC
T ss_pred cCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEec
Confidence 7899999999999999999999999888765532 48999999999999999999 9999999998887666
Q ss_pred --eccCCceeEEEe-cCCCEEEEeeCCCeEEEEecc
Q 006939 71 --DVGWSRLSDLNV-HEGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 71 --~~~~s~v~~l~~-~dg~lL~sg~~Dg~V~vWdv~ 103 (625)
..|...|.++.| +++.+|++|+.|+.|++|++.
T Consensus 339 ~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~ 374 (380)
T 3iz6_a 339 LQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFS 374 (380)
T ss_dssp SCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECC
T ss_pred ccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecC
Confidence 457778899988 799999999999999999987
No 30
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.40 E-value=3.6e-12 Score=143.48 Aligned_cols=103 Identities=18% Similarity=0.261 Sum_probs=95.5
Q ss_pred CCCC-EEEEEeCCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCeeEEEEe-------
Q 006939 1 MSGY-FHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVD------- 71 (625)
Q Consensus 1 PdG~-lLASGS~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~i~t~~------- 71 (625)
|++. +|++|+.|++|++||+.+++++..+.+|...|.+++|+|||.+|++|+.| +|++||+.++++...+.
T Consensus 157 p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~ 236 (611)
T 1nr0_A 157 PSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNV 236 (611)
T ss_dssp SSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSC
T ss_pred CCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeecccccccc
Confidence 5665 69999999999999999999999999999999999999999999999999 99999999999887773
Q ss_pred ccCCceeEEEe-cCCCEEEEeeCCCeEEEEecc
Q 006939 72 VGWSRLSDLNV-HEGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 72 ~~~s~v~~l~~-~dg~lL~sg~~Dg~V~vWdv~ 103 (625)
.|...+..+.| +++++|++++.|+.|++||+.
T Consensus 237 ~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~ 269 (611)
T 1nr0_A 237 AHSGSVFGLTWSPDGTKIASASADKTIKIWNVA 269 (611)
T ss_dssp SSSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred ccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 57788999998 799999999999999999987
No 31
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.39 E-value=3.9e-12 Score=139.75 Aligned_cols=101 Identities=21% Similarity=0.362 Sum_probs=94.3
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCeeEEEEeccCCceeE
Q 006939 1 MSGYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVDVGWSRLSD 79 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~i~t~~~~~s~v~~ 79 (625)
|||++||+|+.|++|+|||. +++++.++.+|...|.+++|+|||++|++++.| +|+|||+ +++++..+..+...+..
T Consensus 26 pdg~~las~~~d~~v~iWd~-~~~~~~~l~gh~~~V~~l~fspdg~~las~~~d~~i~vWd~-~~~~~~~~~~~~~~v~~ 103 (577)
T 2ymu_A 26 PDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRG 103 (577)
T ss_dssp TTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEET-TSCEEEEECCCSSCEEE
T ss_pred CCCCEEEEEeCCCEEEEEEC-CCCEEEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEEC-CCCEEEEEECCCCCEEE
Confidence 79999999999999999995 689999999999999999999999999999999 9999996 57788888888889999
Q ss_pred EEe-cCCCEEEEeeCCCeEEEEecc
Q 006939 80 LNV-HEGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 80 l~~-~dg~lL~sg~~Dg~V~vWdv~ 103 (625)
+.| +++++|++++.|+.+++|+..
T Consensus 104 ~~~s~d~~~l~~~~~d~~~~~~~~~ 128 (577)
T 2ymu_A 104 VAFSPDGQTIASASDDKTVKLWNRN 128 (577)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETT
T ss_pred EEECCCCCEEEEEcCCCceeecccc
Confidence 998 799999999999999999976
No 32
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.39 E-value=4.4e-12 Score=139.30 Aligned_cols=119 Identities=20% Similarity=0.313 Sum_probs=106.9
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCeeEEEEeccCCceeE
Q 006939 1 MSGYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVDVGWSRLSD 79 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~i~t~~~~~s~v~~ 79 (625)
||+++|++|+.|++|++||+ +++++..+.+|...|.+++|+|++.+|++++.| .|++||. +++++..+..|...+..
T Consensus 436 ~d~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~h~~~v~~ 513 (577)
T 2ymu_A 436 PDDQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRG 513 (577)
T ss_dssp TTSSEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEE
T ss_pred CCCCEEEEEcCCCEEEEEEC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeCCCCCEEE
Confidence 78999999999999999996 578889999999999999999999999999999 9999995 67888888888899999
Q ss_pred EEe-cCCCEEEEeeCCCeEEEEeccCCccccccccceeEEeccCCCccccc
Q 006939 80 LNV-HEGKLLGCSYNQSCVGVWVVDISRIEPYTIGSVTRVNGLSESKSSAS 129 (625)
Q Consensus 80 l~~-~dg~lL~sg~~Dg~V~vWdv~~~~~~~~~~~~i~~l~gHs~~v~~~~ 129 (625)
+.| +++++|++++.|+.|++||.. +..+..+.+|...+....
T Consensus 514 l~~s~dg~~l~s~~~dg~v~lwd~~--------~~~~~~~~~h~~~v~~~~ 556 (577)
T 2ymu_A 514 VAFSPDGQTIASASDDKTVKLWNRN--------GQLLQTLTGHSSSVWGVA 556 (577)
T ss_dssp EEECTTSSCEEEEETTSEEEEECTT--------SCEEEEEECCSSCEEEEE
T ss_pred EEEcCCCCEEEEEECcCEEEEEeCC--------CCEEEEEcCCCCCEEEEE
Confidence 998 899999999999999999864 456778899988876544
No 33
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.39 E-value=2.3e-12 Score=135.94 Aligned_cols=103 Identities=4% Similarity=0.102 Sum_probs=93.1
Q ss_pred CCCCEEEEEeCCC----eEEEEECCCCeE----EEEeCCCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCeeEEEE-
Q 006939 1 MSGYFHFSGSADR----TVKFWDLETFEL----IGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAV- 70 (625)
Q Consensus 1 PdG~lLASGS~D~----tVkIWDL~tg~~----i~tl~~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~i~t~- 70 (625)
|||.++++++.|+ ++++||+..+.. ...+.+|...|.+++|+|||++|++|+.| +|+|||+++++++..+
T Consensus 229 pdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~ 308 (365)
T 4h5i_A 229 ADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFK 308 (365)
T ss_dssp ETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEET
T ss_pred CCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEec
Confidence 6899999999888 688999877654 45678899999999999999999999999 9999999999998875
Q ss_pred eccCCceeEEEe-cCCCEEEEeeCCCeEEEEecc
Q 006939 71 DVGWSRLSDLNV-HEGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 71 ~~~~s~v~~l~~-~dg~lL~sg~~Dg~V~vWdv~ 103 (625)
.+|...|.++.| +++++|++|+.|++|+||++.
T Consensus 309 ~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip 342 (365)
T 4h5i_A 309 QAHSFAITEVTISPDSTYVASVSAANTIHIIKLP 342 (365)
T ss_dssp TSSSSCEEEEEECTTSCEEEEEETTSEEEEEECC
T ss_pred CcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcC
Confidence 678899999999 899999999999999999986
No 34
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.39 E-value=2.4e-12 Score=135.24 Aligned_cols=100 Identities=6% Similarity=-0.011 Sum_probs=91.7
Q ss_pred CCEEEEEeCCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCC-CEEEEEeCC-cEEEEeCCCCeeEEEEeccCCceeEE
Q 006939 3 GYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDG-RTLLCGLHE-SLKVFSWEPIRCHDAVDVGWSRLSDL 80 (625)
Q Consensus 3 G~lLASGS~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg-~~LvSgs~D-sIrVWdl~sg~~i~t~~~~~s~v~~l 80 (625)
+.+|++|+.|++|++||+.+++++..+.+|...|.+++|+|++ ++|++|+.| +|+|||+++++++..+ .|...|..+
T Consensus 239 ~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~-~H~~~V~~v 317 (357)
T 4g56_B 239 DDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL-SHRDFVTGV 317 (357)
T ss_dssp TTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC-CCSSCEEEE
T ss_pred cceEEEeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC-CCCCCEEEE
Confidence 6789999999999999999999999999999999999999987 578899999 9999999999988765 577889999
Q ss_pred Ee-c-CCCEEEEeeCCCeEEEEecc
Q 006939 81 NV-H-EGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 81 ~~-~-dg~lL~sg~~Dg~V~vWdv~ 103 (625)
.| | ++.+|++++.|+.|++|++.
T Consensus 318 afsP~d~~~l~s~s~Dg~v~iW~~~ 342 (357)
T 4g56_B 318 AWSPLDHSKFTTVGWDHKVLHHHLP 342 (357)
T ss_dssp EECSSSTTEEEEEETTSCEEEEECC
T ss_pred EEeCCCCCEEEEEcCCCeEEEEECC
Confidence 98 4 78999999999999999986
No 35
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.39 E-value=4.6e-12 Score=142.61 Aligned_cols=103 Identities=17% Similarity=0.280 Sum_probs=92.0
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCeEEEEeC-------CCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCeeEEEE--
Q 006939 1 MSGYFHFSGSADRTVKFWDLETFELIGSAG-------PETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAV-- 70 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~tg~~i~tl~-------~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~i~t~-- 70 (625)
|||++||+|+.|++|++||+.+++++..+. +|...|.+++|+|+|.+|++|+.| +|++||+.+++++..+
T Consensus 200 pdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~ 279 (611)
T 1nr0_A 200 PDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPV 279 (611)
T ss_dssp TTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEEC
T ss_pred CCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecC
Confidence 789999999999999999999999998884 799999999999999999999999 9999999988765433
Q ss_pred -----------------------------------------eccCCceeEEEe-cCCCEEEEeeCCCeEEEEecc
Q 006939 71 -----------------------------------------DVGWSRLSDLNV-HEGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 71 -----------------------------------------~~~~s~v~~l~~-~dg~lL~sg~~Dg~V~vWdv~ 103 (625)
..|...+..+.| +++++|++++.|+.|++||+.
T Consensus 280 ~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~ 354 (611)
T 1nr0_A 280 GTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDIS 354 (611)
T ss_dssp CSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred CCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECC
Confidence 235566788888 799999999999999999987
No 36
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.39 E-value=4.9e-12 Score=126.98 Aligned_cols=103 Identities=17% Similarity=0.231 Sum_probs=92.8
Q ss_pred CCCCEEEEEeCCCeEEEEECCCC----eEEEEeCCCCCCeEEEEEcC--CCCEEEEEeCC-cEEEEeCCCC---------
Q 006939 1 MSGYFHFSGSADRTVKFWDLETF----ELIGSAGPETSGVRCLTFNP--DGRTLLCGLHE-SLKVFSWEPI--------- 64 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~tg----~~i~tl~~h~~~V~sv~fsP--dg~~LvSgs~D-sIrVWdl~sg--------- 64 (625)
|+|.+||+|+.|++|++||+.++ +++..+.+|...|.+++|+| ++.+|++|+.| .|++||++.+
T Consensus 21 ~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~ 100 (351)
T 3f3f_A 21 FYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRW 100 (351)
T ss_dssp SSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSE
T ss_pred CCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCc
Confidence 68999999999999999999876 56778899999999999999 69999999999 9999999886
Q ss_pred eeEEEEeccCCceeEEEe-cC--CCEEEEeeCCCeEEEEecc
Q 006939 65 RCHDAVDVGWSRLSDLNV-HE--GKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 65 ~~i~t~~~~~s~v~~l~~-~d--g~lL~sg~~Dg~V~vWdv~ 103 (625)
+++..+..+...+..+.+ ++ +.+|++++.|+.|++||+.
T Consensus 101 ~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~ 142 (351)
T 3f3f_A 101 NKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDAL 142 (351)
T ss_dssp EEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECS
T ss_pred ceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCC
Confidence 556777778888999998 56 8999999999999999987
No 37
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.38 E-value=1.7e-12 Score=133.45 Aligned_cols=103 Identities=17% Similarity=0.156 Sum_probs=90.3
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCe--EEEEeCCCCCCeEEEEEcC--CCCEEEEEeCC-cEEEEeCCCCe--eEEEEecc
Q 006939 1 MSGYFHFSGSADRTVKFWDLETFE--LIGSAGPETSGVRCLTFNP--DGRTLLCGLHE-SLKVFSWEPIR--CHDAVDVG 73 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~tg~--~i~tl~~h~~~V~sv~fsP--dg~~LvSgs~D-sIrVWdl~sg~--~i~t~~~~ 73 (625)
|+|++||+|+.|++|+|||+.++. ++..+.+|...|.+++|++ ++.+|++|+.| +|++||++++. +...+..|
T Consensus 23 ~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h 102 (316)
T 3bg1_A 23 YYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGH 102 (316)
T ss_dssp GGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCC
T ss_pred CCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCC
Confidence 589999999999999999998875 4678999999999999976 48999999999 99999999874 45566677
Q ss_pred CCceeEEEe-cC--CCEEEEeeCCCeEEEEecc
Q 006939 74 WSRLSDLNV-HE--GKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 74 ~s~v~~l~~-~d--g~lL~sg~~Dg~V~vWdv~ 103 (625)
...+..+.| ++ +.+|++|+.|+.|++||+.
T Consensus 103 ~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~ 135 (316)
T 3bg1_A 103 DSSVNSVCWAPHDYGLILACGSSDGAISLLTYT 135 (316)
T ss_dssp SSCCCEEEECCTTTCSCEEEECSSSCEEEEEEC
T ss_pred CCceEEEEECCCCCCcEEEEEcCCCCEEEEecC
Confidence 788889988 54 7899999999999999987
No 38
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.38 E-value=3.7e-12 Score=135.36 Aligned_cols=120 Identities=9% Similarity=0.085 Sum_probs=103.6
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCeEEEEeCC--CCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCeeEEEEe-ccCCc
Q 006939 1 MSGYFHFSGSADRTVKFWDLETFELIGSAGP--ETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVD-VGWSR 76 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~tg~~i~tl~~--h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~i~t~~-~~~s~ 76 (625)
|++.+|++|+.|++|++||+++++++..+.+ |...|.+++|+|++.+|++|+.| .|++||++.++++..+. .+...
T Consensus 180 ~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 259 (437)
T 3gre_A 180 EEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAP 259 (437)
T ss_dssp SSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEE
T ss_pred CCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCc
Confidence 4689999999999999999999999999988 88999999999999999999999 99999999999988775 45567
Q ss_pred eeEEEe-----cCCCEEEEeeCCCeEEEEeccCCccccccccceeEEeccCCCccc
Q 006939 77 LSDLNV-----HEGKLLGCSYNQSCVGVWVVDISRIEPYTIGSVTRVNGLSESKSS 127 (625)
Q Consensus 77 v~~l~~-----~dg~lL~sg~~Dg~V~vWdv~~~~~~~~~~~~i~~l~gHs~~v~~ 127 (625)
+..+.+ +++.+|++|+.|+.|++||+. .+..+..+.+|...+..
T Consensus 260 v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~-------~~~~~~~~~~~~~~~~~ 308 (437)
T 3gre_A 260 ITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFV-------KGHCQYAFINSDEQPSM 308 (437)
T ss_dssp EEEEEECTTTCTTEEEEEEESTTEEEEEEETT-------TTEEEEEEESSSSCCCG
T ss_pred eEEEEeccccCCCccEEEEEcCCCcEEEEEcC-------CCcEEEEEEcCCCCCcc
Confidence 777744 467799999999999999997 45667777777665543
No 39
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.37 E-value=7.2e-12 Score=127.95 Aligned_cols=101 Identities=11% Similarity=0.140 Sum_probs=95.0
Q ss_pred CCEEEEEeCCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcC-CCCEEEEEeCC-cEEEEeCCCCeeEEEE---eccCCce
Q 006939 3 GYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNP-DGRTLLCGLHE-SLKVFSWEPIRCHDAV---DVGWSRL 77 (625)
Q Consensus 3 G~lLASGS~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsP-dg~~LvSgs~D-sIrVWdl~sg~~i~t~---~~~~s~v 77 (625)
|.+|++|+.|++|++||+.+++++..+.+|...|.+++|+| ++.+|++|+.| .|++||++.+++...+ ..+...+
T Consensus 85 ~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v 164 (366)
T 3k26_A 85 HPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEV 164 (366)
T ss_dssp CEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCE
T ss_pred CCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCce
Confidence 78999999999999999999999999999999999999999 89999999998 9999999999998887 5677889
Q ss_pred eEEEe-cCCCEEEEeeCCCeEEEEecc
Q 006939 78 SDLNV-HEGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 78 ~~l~~-~dg~lL~sg~~Dg~V~vWdv~ 103 (625)
..+.+ +++.+|++++.|+.|++||++
T Consensus 165 ~~~~~~~~~~~l~~~~~dg~i~i~d~~ 191 (366)
T 3k26_A 165 LSADYDLLGEKIMSCGMDHSLKLWRIN 191 (366)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEESC
T ss_pred eEEEECCCCCEEEEecCCCCEEEEECC
Confidence 99998 789999999999999999987
No 40
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.37 E-value=5.2e-12 Score=133.94 Aligned_cols=117 Identities=10% Similarity=0.068 Sum_probs=88.8
Q ss_pred CCCEEEEEeCCCeEEEEECCCCeEEEEeCCCC---CCeEEEEEcCCCCEE------------EEEeCC-cEEEEeCCCCe
Q 006939 2 SGYFHFSGSADRTVKFWDLETFELIGSAGPET---SGVRCLTFNPDGRTL------------LCGLHE-SLKVFSWEPIR 65 (625)
Q Consensus 2 dG~lLASGS~D~tVkIWDL~tg~~i~tl~~h~---~~V~sv~fsPdg~~L------------vSgs~D-sIrVWdl~sg~ 65 (625)
++.+|++|+.|++|+|||+.+|++++++.+|. ..|.+++|+|+|.++ ++|+.| +|++||..+++
T Consensus 192 ~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk 271 (356)
T 2w18_A 192 MQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTL 271 (356)
T ss_dssp STTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTE
T ss_pred CCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCE
Confidence 56889999999999999999999999998654 367788999999876 467788 99999999999
Q ss_pred eEEEEe-----ccCCceeEEEecCCCEEEEeeCCCeEEEEeccCCccccccccceeEEeccCCCcc
Q 006939 66 CHDAVD-----VGWSRLSDLNVHEGKLLGCSYNQSCVGVWVVDISRIEPYTIGSVTRVNGLSESKS 126 (625)
Q Consensus 66 ~i~t~~-----~~~s~v~~l~~~dg~lL~sg~~Dg~V~vWdv~~~~~~~~~~~~i~~l~gHs~~v~ 126 (625)
++.++. .+........+ ++.++++++.|++|+|||+. .+..+.++.+|...+.
T Consensus 272 ~l~v~~~~~p~Gh~~~~lsg~~-sg~~lASgS~DgTIkIWDl~-------tGk~l~tL~gH~~~vv 329 (356)
T 2w18_A 272 SVGVMLYCLPPGQAGRFLEGDV-KDHCAAAILTSGTIAIWDLL-------LGQCTALLPPVSDQHW 329 (356)
T ss_dssp EEEEEEECCCTTCCCCEEEEEE-ETTEEEEEETTSCEEEEETT-------TCSEEEEECCC--CCC
T ss_pred EEEEEEeeccCCCcceeEcccc-CCCEEEEEcCCCcEEEEECC-------CCcEEEEecCCCCCeE
Confidence 887653 22222222222 36789999999999999998 6777888888877554
No 41
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.36 E-value=4.3e-12 Score=136.23 Aligned_cols=120 Identities=11% Similarity=0.086 Sum_probs=94.0
Q ss_pred CCCEEEEEeCCCeEEEEECCCCeE--EEEeCCCCCCeEEEEEcC-CCCEEEEEeCC-cEEEEeCCCCeeEEEEecc--CC
Q 006939 2 SGYFHFSGSADRTVKFWDLETFEL--IGSAGPETSGVRCLTFNP-DGRTLLCGLHE-SLKVFSWEPIRCHDAVDVG--WS 75 (625)
Q Consensus 2 dG~lLASGS~D~tVkIWDL~tg~~--i~tl~~h~~~V~sv~fsP-dg~~LvSgs~D-sIrVWdl~sg~~i~t~~~~--~s 75 (625)
++.+||+|+.||+|+|||+.+++. +..+.+|.+.|.+|+|+| ++.+|++|+.| +|+|||++.+.+......+ ..
T Consensus 131 ~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~ 210 (435)
T 4e54_B 131 HPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINI 210 (435)
T ss_dssp CTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSC
T ss_pred CCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCc
Confidence 567999999999999999987654 556678999999999998 68999999999 9999999876554333322 23
Q ss_pred ceeEEEe-cCCCEEEEeeCCCeEEEEeccCCccccccccceeEEeccCCCccccc
Q 006939 76 RLSDLNV-HEGKLLGCSYNQSCVGVWVVDISRIEPYTIGSVTRVNGLSESKSSAS 129 (625)
Q Consensus 76 ~v~~l~~-~dg~lL~sg~~Dg~V~vWdv~~~~~~~~~~~~i~~l~gHs~~v~~~~ 129 (625)
.+..+.+ +++.+|++|+.|+.|++||++ +..+..+.+|...+....
T Consensus 211 ~~~~~~~~~~~~~l~~g~~dg~i~~wd~~--------~~~~~~~~~h~~~v~~v~ 257 (435)
T 4e54_B 211 WFCSLDVSASSRMVVTGDNVGNVILLNMD--------GKELWNLRMHKKKVTHVA 257 (435)
T ss_dssp CCCCEEEETTTTEEEEECSSSBEEEEESS--------SCBCCCSBCCSSCEEEEE
T ss_pred cEEEEEECCCCCEEEEEeCCCcEeeeccC--------cceeEEEecccceEEeee
Confidence 3455666 799999999999999999987 234455667777665543
No 42
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.36 E-value=8.2e-12 Score=127.08 Aligned_cols=126 Identities=16% Similarity=0.165 Sum_probs=99.1
Q ss_pred CCCEEEEEeCCCeEEEEECCCCe--EEEEeCCCCCCeEEEEEcCC--CCEEEEEeCC-cEEEEeCCCCee--EEEEeccC
Q 006939 2 SGYFHFSGSADRTVKFWDLETFE--LIGSAGPETSGVRCLTFNPD--GRTLLCGLHE-SLKVFSWEPIRC--HDAVDVGW 74 (625)
Q Consensus 2 dG~lLASGS~D~tVkIWDL~tg~--~i~tl~~h~~~V~sv~fsPd--g~~LvSgs~D-sIrVWdl~sg~~--i~t~~~~~ 74 (625)
+|.+||||+.|++|+|||+++++ .+..+.+|...|.+++|+|+ |.+|++|+.| .|++||++.+.. ...+..|.
T Consensus 66 ~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~ 145 (297)
T 2pm7_B 66 FGTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHA 145 (297)
T ss_dssp GCSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCS
T ss_pred cCCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeeccc
Confidence 48899999999999999999874 56778899999999999998 8899999999 999999987532 34455666
Q ss_pred CceeEEEe-cC-------------CCEEEEeeCCCeEEEEeccCCccccccccceeEEeccCCCcccccc
Q 006939 75 SRLSDLNV-HE-------------GKLLGCSYNQSCVGVWVVDISRIEPYTIGSVTRVNGLSESKSSASG 130 (625)
Q Consensus 75 s~v~~l~~-~d-------------g~lL~sg~~Dg~V~vWdv~~~~~~~~~~~~i~~l~gHs~~v~~~~~ 130 (625)
..+..+.| ++ +++|++|+.|+.|++||++.... .......+.+|...+....-
T Consensus 146 ~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~---~~~~~~~l~~H~~~V~~v~~ 212 (297)
T 2pm7_B 146 IGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQ---TYVLESTLEGHSDWVRDVAW 212 (297)
T ss_dssp SCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTT---EEEEEEEECCCSSCEEEEEE
T ss_pred CccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCc---eEEEEEEecCCCCceEEEEE
Confidence 77888877 43 57999999999999999872110 01134567888887765543
No 43
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.36 E-value=5.8e-12 Score=130.50 Aligned_cols=101 Identities=11% Similarity=0.066 Sum_probs=89.9
Q ss_pred CCCEEEEEeCCCeEEEEECCCCeEEEEeC-CCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCeeE-EEEec-cCCce
Q 006939 2 SGYFHFSGSADRTVKFWDLETFELIGSAG-PETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCH-DAVDV-GWSRL 77 (625)
Q Consensus 2 dG~lLASGS~D~tVkIWDL~tg~~i~tl~-~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~i-~t~~~-~~s~v 77 (625)
+|.+|++|+.|++|++||+++++++.... .|...|.+++|+|+|.+|++|+.| .|++||++++++. ..+.. |...+
T Consensus 138 ~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v 217 (343)
T 3lrv_A 138 NTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKI 217 (343)
T ss_dssp -CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCE
T ss_pred CCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCE
Confidence 78999999999999999999999977764 445589999999999999999999 9999999999887 67776 78899
Q ss_pred eEEEe-cCCCEEEEeeCCCeEEEEecc
Q 006939 78 SDLNV-HEGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 78 ~~l~~-~dg~lL~sg~~Dg~V~vWdv~ 103 (625)
..+.| +++.+|++++.+ .|++||++
T Consensus 218 ~~l~fs~~g~~l~s~~~~-~v~iwd~~ 243 (343)
T 3lrv_A 218 KEVKFADNGYWMVVECDQ-TVVCFDLR 243 (343)
T ss_dssp EEEEECTTSSEEEEEESS-BEEEEETT
T ss_pred EEEEEeCCCCEEEEEeCC-eEEEEEcC
Confidence 99999 799999999955 99999998
No 44
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.36 E-value=5.2e-12 Score=132.83 Aligned_cols=103 Identities=17% Similarity=0.159 Sum_probs=90.8
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCeeEEEEecc---C--
Q 006939 1 MSGYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVDVG---W-- 74 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~i~t~~~~---~-- 74 (625)
|+|.+|++|+.|++|++||+.+++++..+.+|...|.+++|+|++.+|++|+.| .|++||+++++++..+..+ .
T Consensus 149 ~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~ 228 (420)
T 3vl1_A 149 PSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDG 228 (420)
T ss_dssp TTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCC
T ss_pred CCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCC
Confidence 689999999999999999999999999999999999999999999999999999 9999999999988777532 2
Q ss_pred -------------------CceeEEEe-cCCCEEEEeeCCCeEEEEecc
Q 006939 75 -------------------SRLSDLNV-HEGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 75 -------------------s~v~~l~~-~dg~lL~sg~~Dg~V~vWdv~ 103 (625)
..+..+.| +++.+|++++.|+.|++||+.
T Consensus 229 v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~ 277 (420)
T 3vl1_A 229 VNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVF 277 (420)
T ss_dssp EEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETT
T ss_pred ccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECC
Confidence 22333444 688899999999999999987
No 45
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.36 E-value=1.9e-11 Score=124.65 Aligned_cols=102 Identities=14% Similarity=0.223 Sum_probs=95.4
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCeeEEEEeccCCceeE
Q 006939 1 MSGYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVDVGWSRLSD 79 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~i~t~~~~~s~v~~ 79 (625)
|+|.+|++|+.|+.|++||+.+++.+..+.+|...|.+++|+|++.+|++++.| .|++||+.+++++..+. +...+..
T Consensus 42 ~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~ 120 (369)
T 3zwl_B 42 KEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWK-SPVPVKR 120 (369)
T ss_dssp TTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE-CSSCEEE
T ss_pred CCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEee-cCCCeEE
Confidence 689999999999999999999999999999999999999999999999999999 99999999999988877 5567888
Q ss_pred EEe-cCCCEEEEeeCC-----CeEEEEecc
Q 006939 80 LNV-HEGKLLGCSYNQ-----SCVGVWVVD 103 (625)
Q Consensus 80 l~~-~dg~lL~sg~~D-----g~V~vWdv~ 103 (625)
+.+ +++.++++++.+ +.|.+||+.
T Consensus 121 ~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~ 150 (369)
T 3zwl_B 121 VEFSPCGNYFLAILDNVMKNPGSINIYEIE 150 (369)
T ss_dssp EEECTTSSEEEEEECCBTTBCCEEEEEEEE
T ss_pred EEEccCCCEEEEecCCccCCCCEEEEEEec
Confidence 888 799999999998 999999998
No 46
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.35 E-value=8.4e-12 Score=131.05 Aligned_cols=122 Identities=16% Similarity=0.224 Sum_probs=102.7
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCC-EEEEEeCC-cEEEEeCCCCeeEEEEe--ccCCc
Q 006939 1 MSGYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGR-TLLCGLHE-SLKVFSWEPIRCHDAVD--VGWSR 76 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~-~LvSgs~D-sIrVWdl~sg~~i~t~~--~~~s~ 76 (625)
|||.+|++|+.|++|++||+++++++..+.+|...|.+++|++++. ++++++.| .|++||++++++...+. .+...
T Consensus 149 pdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~ 228 (357)
T 4g56_B 149 SDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTI 228 (357)
T ss_dssp SSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSC
T ss_pred CCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeecccccc
Confidence 7899999999999999999999999999999999999999999875 77888888 99999999988765543 34455
Q ss_pred eeEEEe-c-CCCEEEEeeCCCeEEEEeccCCccccccccceeEEeccCCCccccc
Q 006939 77 LSDLNV-H-EGKLLGCSYNQSCVGVWVVDISRIEPYTIGSVTRVNGLSESKSSAS 129 (625)
Q Consensus 77 v~~l~~-~-dg~lL~sg~~Dg~V~vWdv~~~~~~~~~~~~i~~l~gHs~~v~~~~ 129 (625)
+..+.| + ++.+|++|+.|+.|++||+. .+..+..+.+|...+....
T Consensus 229 v~~v~~sp~~~~~la~g~~d~~i~~wd~~-------~~~~~~~~~~~~~~v~~l~ 276 (357)
T 4g56_B 229 PTSVTWHPEKDDTFACGDETGNVSLVNIK-------NPDSAQTSAVHSQNITGLA 276 (357)
T ss_dssp EEEEEECTTSTTEEEEEESSSCEEEEESS-------CGGGCEEECCCSSCEEEEE
T ss_pred ccchhhhhcccceEEEeecccceeEEECC-------CCcEeEEEeccceeEEEEE
Confidence 777877 4 46789999999999999987 4556677788877765543
No 47
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.35 E-value=1.1e-11 Score=127.09 Aligned_cols=124 Identities=19% Similarity=0.153 Sum_probs=102.6
Q ss_pred CCCCEEEEEeCCCeEEEEECC--CCeEEEEeCCCCCCeEEEEEcCC--CCEEEEEeCC-cEEEEeCCCCe--eEEEEecc
Q 006939 1 MSGYFHFSGSADRTVKFWDLE--TFELIGSAGPETSGVRCLTFNPD--GRTLLCGLHE-SLKVFSWEPIR--CHDAVDVG 73 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~--tg~~i~tl~~h~~~V~sv~fsPd--g~~LvSgs~D-sIrVWdl~sg~--~i~t~~~~ 73 (625)
|+|.+||+|+.|++|++||+. +++.+..+.+|...|.+++|+++ +.+|++|+.| .|++||+..++ +...+..+
T Consensus 21 ~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~ 100 (379)
T 3jrp_A 21 YYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVH 100 (379)
T ss_dssp SSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCC
T ss_pred CCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCC
Confidence 689999999999999999998 66788899999999999999987 9999999999 99999999987 56666677
Q ss_pred CCceeEEEe-cC--CCEEEEeeCCCeEEEEeccCCccccccccceeEEeccCCCccccc
Q 006939 74 WSRLSDLNV-HE--GKLLGCSYNQSCVGVWVVDISRIEPYTIGSVTRVNGLSESKSSAS 129 (625)
Q Consensus 74 ~s~v~~l~~-~d--g~lL~sg~~Dg~V~vWdv~~~~~~~~~~~~i~~l~gHs~~v~~~~ 129 (625)
...+..+.+ ++ +.+|++++.|+.|++||+.... ......+.+|...+....
T Consensus 101 ~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~-----~~~~~~~~~~~~~v~~~~ 154 (379)
T 3jrp_A 101 SASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENG-----TTSPIIIDAHAIGVNSAS 154 (379)
T ss_dssp SSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTS-----CCCEEEEECCTTCEEEEE
T ss_pred CcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCC-----ceeeEEecCCCCceEEEE
Confidence 788999998 56 8999999999999999987221 122334556666555443
No 48
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.34 E-value=1.3e-12 Score=135.58 Aligned_cols=125 Identities=8% Similarity=0.033 Sum_probs=96.3
Q ss_pred CCCCEEEEEeCCCeEEEEECCCC--eEEEEeCCCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCe---eEEEEeccC
Q 006939 1 MSGYFHFSGSADRTVKFWDLETF--ELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIR---CHDAVDVGW 74 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~tg--~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~---~i~t~~~~~ 74 (625)
|||.+||+|+.|++|++||+.++ +++..+.+|...|.+++|+|++.+|++|+.| .|++||+..+. +...+..+.
T Consensus 21 ~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~ 100 (377)
T 3dwl_C 21 SQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLN 100 (377)
T ss_dssp SSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCCS
T ss_pred CCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccC
Confidence 68999999999999999999988 7888899999999999999999999999999 99999999877 555566677
Q ss_pred CceeEEEe-cCCCEEEEeeCCCeEEEEeccCCccccccccceeEEec-cCCCccccc
Q 006939 75 SRLSDLNV-HEGKLLGCSYNQSCVGVWVVDISRIEPYTIGSVTRVNG-LSESKSSAS 129 (625)
Q Consensus 75 s~v~~l~~-~dg~lL~sg~~Dg~V~vWdv~~~~~~~~~~~~i~~l~g-Hs~~v~~~~ 129 (625)
..+..+.+ +++.+|++++.|+.|++||++.... ......+.+ |...+....
T Consensus 101 ~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~----~~~~~~~~~~h~~~v~~~~ 153 (377)
T 3dwl_C 101 RAATFVRWSPNEDKFAVGSGARVISVCYFEQEND----WWVSKHLKRPLRSTILSLD 153 (377)
T ss_dssp SCEEEEECCTTSSCCEEEESSSCEEECCC---------CCCCEEECSSCCSCEEEEE
T ss_pred CceEEEEECCCCCEEEEEecCCeEEEEEECCccc----ceeeeEeecccCCCeEEEE
Confidence 88899998 7899999999999999999882210 012444555 665555443
No 49
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.34 E-value=1.9e-11 Score=130.94 Aligned_cols=101 Identities=16% Similarity=0.331 Sum_probs=94.4
Q ss_pred CCCEEEEEeCCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCeeEEEEeccCCceeEE
Q 006939 2 SGYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVDVGWSRLSDL 80 (625)
Q Consensus 2 dG~lLASGS~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~i~t~~~~~s~v~~l 80 (625)
++.+|++|+.|++|++||+.+++++..+.+|.+.|.+++|+|++ ++++|+.| +|++||+++++++..+..+...+..+
T Consensus 131 ~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l 209 (464)
T 3v7d_B 131 EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCL 209 (464)
T ss_dssp ETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEE
T ss_pred CCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEE
Confidence 57899999999999999999999999999999999999999988 88999999 99999999999999998888889888
Q ss_pred Ee---cCCCEEEEeeCCCeEEEEecc
Q 006939 81 NV---HEGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 81 ~~---~dg~lL~sg~~Dg~V~vWdv~ 103 (625)
.+ +++.++++++.|+.|++||+.
T Consensus 210 ~~~~~~~~~~l~s~s~d~~i~vwd~~ 235 (464)
T 3v7d_B 210 DIVEYKNIKYIVTGSRDNTLHVWKLP 235 (464)
T ss_dssp EEEESSSCEEEEEEETTSCEEEEECC
T ss_pred EEecCCCCCEEEEEcCCCcEEEeeCC
Confidence 87 377899999999999999988
No 50
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.33 E-value=1.6e-11 Score=148.04 Aligned_cols=122 Identities=16% Similarity=0.184 Sum_probs=109.9
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCeeEEEEeccCCceeE
Q 006939 1 MSGYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVDVGWSRLSD 79 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~i~t~~~~~s~v~~ 79 (625)
|||.+||+|+.|++|++||+.+++.+..+.+|...|.+++|+|+|.++++|+.| .|+|||+.+++++..+..+...+..
T Consensus 625 ~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~ 704 (1249)
T 3sfz_A 625 QDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNC 704 (1249)
T ss_dssp TTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEE
T ss_pred CCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEE
Confidence 689999999999999999999999999999999999999999999999999998 9999999999999999989889999
Q ss_pred EEe-c--CCCEEEEeeCCCeEEEEeccCCccccccccceeEEeccCCCccccc
Q 006939 80 LNV-H--EGKLLGCSYNQSCVGVWVVDISRIEPYTIGSVTRVNGLSESKSSAS 129 (625)
Q Consensus 80 l~~-~--dg~lL~sg~~Dg~V~vWdv~~~~~~~~~~~~i~~l~gHs~~v~~~~ 129 (625)
+.| + ++.++++|+.|+.|++||+. .+..+..+.+|...+....
T Consensus 705 ~~~~~~~~~~~l~sg~~d~~v~vwd~~-------~~~~~~~~~~h~~~v~~~~ 750 (1249)
T 3sfz_A 705 CHFTNKSNHLLLATGSNDFFLKLWDLN-------QKECRNTMFGHTNSVNHCR 750 (1249)
T ss_dssp EEECSSSSCCEEEEEETTSCEEEEETT-------SSSEEEEECCCSSCEEEEE
T ss_pred EEEecCCCceEEEEEeCCCeEEEEECC-------CcchhheecCCCCCEEEEE
Confidence 998 4 56689999999999999998 4456667777877766544
No 51
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.33 E-value=1.4e-11 Score=140.29 Aligned_cols=122 Identities=17% Similarity=0.199 Sum_probs=101.4
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCeeEEEE---eccCCc
Q 006939 1 MSGYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAV---DVGWSR 76 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~i~t~---~~~~s~ 76 (625)
|+|.+|++|+.|++|+|||+.++.++..+.+|...|.+++|+|++.+|++|+.| +|+|||.......... ..|...
T Consensus 440 ~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~ 519 (694)
T 3dm0_A 440 SDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDW 519 (694)
T ss_dssp TTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSC
T ss_pred CCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCc
Confidence 689999999999999999999999999999999999999999999999999999 9999998754433322 235566
Q ss_pred eeEEEe-cCC--CEEEEeeCCCeEEEEeccCCccccccccceeEEeccCCCccccc
Q 006939 77 LSDLNV-HEG--KLLGCSYNQSCVGVWVVDISRIEPYTIGSVTRVNGLSESKSSAS 129 (625)
Q Consensus 77 v~~l~~-~dg--~lL~sg~~Dg~V~vWdv~~~~~~~~~~~~i~~l~gHs~~v~~~~ 129 (625)
+.++.+ +++ .+|++++.|+.|++||+. .......+.+|...+....
T Consensus 520 v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~-------~~~~~~~~~~h~~~v~~v~ 568 (694)
T 3dm0_A 520 VSCVRFSPNTLQPTIVSASWDKTVKVWNLS-------NCKLRSTLAGHTGYVSTVA 568 (694)
T ss_dssp EEEEEECSCSSSCEEEEEETTSCEEEEETT-------TCCEEEEECCCSSCEEEEE
T ss_pred EEEEEEeCCCCcceEEEEeCCCeEEEEECC-------CCcEEEEEcCCCCCEEEEE
Confidence 888888 444 589999999999999987 3455667788887765544
No 52
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.33 E-value=1.5e-11 Score=140.79 Aligned_cols=103 Identities=14% Similarity=0.184 Sum_probs=98.7
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCeeEEEEeccCCceeE
Q 006939 1 MSGYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVDVGWSRLSD 79 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~i~t~~~~~s~v~~ 79 (625)
|||.+||+|+.|++|+|||+.+++.+..+.+|...|.+++|+|++.+|++|+.| .|+|||+.+++++..+..+...+..
T Consensus 23 p~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~ 102 (814)
T 3mkq_A 23 PTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRS 102 (814)
T ss_dssp SSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEE
T ss_pred CCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEE
Confidence 789999999999999999999999999999999999999999999999999998 9999999999999999888889999
Q ss_pred EEe-cCCCEEEEeeCCCeEEEEecc
Q 006939 80 LNV-HEGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 80 l~~-~dg~lL~sg~~Dg~V~vWdv~ 103 (625)
+.| +++.+|++++.|+.|++||++
T Consensus 103 ~~~s~~~~~l~~~~~dg~i~vw~~~ 127 (814)
T 3mkq_A 103 IAVHPTKPYVLSGSDDLTVKLWNWE 127 (814)
T ss_dssp EEECSSSSEEEEEETTSEEEEEEGG
T ss_pred EEEeCCCCEEEEEcCCCEEEEEECC
Confidence 998 799999999999999999987
No 53
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.33 E-value=3.8e-12 Score=135.33 Aligned_cols=102 Identities=11% Similarity=-0.022 Sum_probs=89.7
Q ss_pred CCCEEEEEeCCCeEEEEECCCCeEE-----EEeCCCCCCeEEEEEcC--------CCCEEEEEeCC-cEEEEeCCCCeeE
Q 006939 2 SGYFHFSGSADRTVKFWDLETFELI-----GSAGPETSGVRCLTFNP--------DGRTLLCGLHE-SLKVFSWEPIRCH 67 (625)
Q Consensus 2 dG~lLASGS~D~tVkIWDL~tg~~i-----~tl~~h~~~V~sv~fsP--------dg~~LvSgs~D-sIrVWdl~sg~~i 67 (625)
++.+||+|+.|++|+|||+.++++. ..+.+|.+.|.+++|+| |+++|+||+.| +|+|||+..+.+.
T Consensus 100 ~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~ 179 (393)
T 4gq1_A 100 YSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPI 179 (393)
T ss_dssp EEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEE
T ss_pred CCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCcee
Confidence 4678999999999999999988753 34789999999999998 88999999999 9999999988887
Q ss_pred EEEeccCCceeEEEe-cCC-CEEEEeeCCCeEEEEecc
Q 006939 68 DAVDVGWSRLSDLNV-HEG-KLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 68 ~t~~~~~s~v~~l~~-~dg-~lL~sg~~Dg~V~vWdv~ 103 (625)
..+..+...+..+.| +++ .+|++++.|+.|++||+.
T Consensus 180 ~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~ 217 (393)
T 4gq1_A 180 LAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWT 217 (393)
T ss_dssp EEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETT
T ss_pred eeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECC
Confidence 777777788888888 555 579999999999999987
No 54
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.32 E-value=2.3e-11 Score=123.96 Aligned_cols=100 Identities=13% Similarity=0.198 Sum_probs=89.4
Q ss_pred CCEEEEEeCCCeEEEEECCC-CeEE-EEeCCCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCeeEEEEeccCCceeE
Q 006939 3 GYFHFSGSADRTVKFWDLET-FELI-GSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVDVGWSRLSD 79 (625)
Q Consensus 3 G~lLASGS~D~tVkIWDL~t-g~~i-~tl~~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~i~t~~~~~s~v~~ 79 (625)
|.+|++|+.|++|++||+.+ +..+ ..+.+|...|.+++|+|++.+|++|+.| .|++||++++.++.. ..+...+..
T Consensus 54 g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~-~~~~~~v~~ 132 (368)
T 3mmy_A 54 GNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQI-AQHDAPVKT 132 (368)
T ss_dssp SEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEE-EECSSCEEE
T ss_pred ceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCceee-ccccCceEE
Confidence 79999999999999999997 5555 7788999999999999999999999999 999999999988764 446677888
Q ss_pred EEe---cCCCEEEEeeCCCeEEEEecc
Q 006939 80 LNV---HEGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 80 l~~---~dg~lL~sg~~Dg~V~vWdv~ 103 (625)
+.+ +++.+|++++.|+.|++||+.
T Consensus 133 ~~~~~~~~~~~l~~~~~dg~i~vwd~~ 159 (368)
T 3mmy_A 133 IHWIKAPNYSCVMTGSWDKTLKFWDTR 159 (368)
T ss_dssp EEEEECSSCEEEEEEETTSEEEEECSS
T ss_pred EEEEeCCCCCEEEEccCCCcEEEEECC
Confidence 887 578889999999999999987
No 55
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.32 E-value=2.2e-11 Score=128.41 Aligned_cols=122 Identities=15% Similarity=0.138 Sum_probs=93.5
Q ss_pred CCCCEEEE--EeCCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeCCcEEEEeCCCCeeEE----------
Q 006939 1 MSGYFHFS--GSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFSWEPIRCHD---------- 68 (625)
Q Consensus 1 PdG~lLAS--GS~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~DsIrVWdl~sg~~i~---------- 68 (625)
|||++||+ |+.|++|+|||+.+++++..+. |...|.+++|+|||.++++++.+.+++|+..++.+..
T Consensus 143 pDg~~la~as~~~d~~i~iwd~~~~~~~~~~~-~~~~V~~v~fspdg~~l~s~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (365)
T 4h5i_A 143 REGTVAAIASSKVPAIMRIIDPSDLTEKFEIE-TRGEVKDLHFSTDGKVVAYITGSSLEVISTVTGSCIARKTDFDKNWS 221 (365)
T ss_dssp TTSSCEEEEESCSSCEEEEEETTTTEEEEEEE-CSSCCCEEEECTTSSEEEEECSSCEEEEETTTCCEEEEECCCCTTEE
T ss_pred CCCCEEEEEECCCCCEEEEeECCCCcEEEEeC-CCCceEEEEEccCCceEEeccceeEEEEEeccCcceeeeecCCCCCC
Confidence 78998765 4579999999999999998886 6678999999999999999998877777765443210
Q ss_pred ------------------------------------------EEeccCCceeEEEe-cCCCEEEEeeCCCeEEEEeccCC
Q 006939 69 ------------------------------------------AVDVGWSRLSDLNV-HEGKLLGCSYNQSCVGVWVVDIS 105 (625)
Q Consensus 69 ------------------------------------------t~~~~~s~v~~l~~-~dg~lL~sg~~Dg~V~vWdv~~~ 105 (625)
.+..+...|..+.| ++|++|++|+.|+.|+|||+.
T Consensus 222 v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~-- 299 (365)
T 4h5i_A 222 LSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLK-- 299 (365)
T ss_dssp EEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETT--
T ss_pred EEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECC--
Confidence 00123344667777 799999999999999999987
Q ss_pred ccccccccceeE-EeccCCCcccccc
Q 006939 106 RIEPYTIGSVTR-VNGLSESKSSASG 130 (625)
Q Consensus 106 ~~~~~~~~~i~~-l~gHs~~v~~~~~ 130 (625)
.+..+.. +.+|...+....-
T Consensus 300 -----~~~~~~~~~~gH~~~V~~v~f 320 (365)
T 4h5i_A 300 -----DLSMSKIFKQAHSFAITEVTI 320 (365)
T ss_dssp -----TTEEEEEETTSSSSCEEEEEE
T ss_pred -----CCcEEEEecCcccCCEEEEEE
Confidence 4455555 4788888766543
No 56
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.32 E-value=4.3e-12 Score=131.73 Aligned_cols=124 Identities=14% Similarity=0.031 Sum_probs=95.5
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCe---EEEEeCC-CCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCC-------------
Q 006939 1 MSGYFHFSGSADRTVKFWDLETFE---LIGSAGP-ETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWE------------- 62 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~tg~---~i~tl~~-h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~------------- 62 (625)
|+|.+|++|+.|++|++||+++++ ++..+.+ |...|.+++|+|++.+|++|+.| .|++||+.
T Consensus 110 ~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~ 189 (377)
T 3dwl_C 110 PNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVW 189 (377)
T ss_dssp TTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSS
T ss_pred CCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCcccccc
Confidence 689999999999999999999887 4677777 99999999999999999999999 99999985
Q ss_pred -----CCeeEEEEeccCCceeEEEe-cCCCEEEEeeCCCeEEEEeccCCccccccccceeEEeccCCCcccc
Q 006939 63 -----PIRCHDAVDVGWSRLSDLNV-HEGKLLGCSYNQSCVGVWVVDISRIEPYTIGSVTRVNGLSESKSSA 128 (625)
Q Consensus 63 -----sg~~i~t~~~~~s~v~~l~~-~dg~lL~sg~~Dg~V~vWdv~~~~~~~~~~~~i~~l~gHs~~v~~~ 128 (625)
.+.++..+ .+...+..+.| +++++|++++.|+.|++||+...... ...+..+.+|...+...
T Consensus 190 ~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~---~~~~~~~~~~~~~v~~~ 257 (377)
T 3dwl_C 190 GSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQP---PRALITVKLSQLPLRSL 257 (377)
T ss_dssp CSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSC---EEECCCEECSSSCEEEE
T ss_pred ccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCc---ceeeEeecCCCCceEEE
Confidence 24455555 67777889988 79999999999999999999822110 01155666776665443
No 57
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.32 E-value=1.2e-11 Score=129.56 Aligned_cols=95 Identities=11% Similarity=0.065 Sum_probs=86.4
Q ss_pred EeCCCeEEEEECCCCe----------------EEEEeCCCCCCeEEEEEcCCCCEEEEEeCC-c-EEEEeCCCCeeEEEE
Q 006939 9 GSADRTVKFWDLETFE----------------LIGSAGPETSGVRCLTFNPDGRTLLCGLHE-S-LKVFSWEPIRCHDAV 70 (625)
Q Consensus 9 GS~D~tVkIWDL~tg~----------------~i~tl~~h~~~V~sv~fsPdg~~LvSgs~D-s-IrVWdl~sg~~i~t~ 70 (625)
|+.|++|++||+.++. ++..+.+|...|.+++|+|+|.+|++|+.| + |+|||+++++++..+
T Consensus 155 g~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~ 234 (355)
T 3vu4_A 155 EFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREF 234 (355)
T ss_dssp SSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEE
T ss_pred CCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEE
Confidence 6899999999999876 267889999999999999999999999999 8 999999999999888
Q ss_pred e-c-cCCceeEEEe-cCCCEEEEeeCCCeEEEEecc
Q 006939 71 D-V-GWSRLSDLNV-HEGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 71 ~-~-~~s~v~~l~~-~dg~lL~sg~~Dg~V~vWdv~ 103 (625)
. . |...+..+.| +++++|++++.|+.|++||+.
T Consensus 235 ~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~ 270 (355)
T 3vu4_A 235 RRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIF 270 (355)
T ss_dssp ECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESS
T ss_pred EcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEcc
Confidence 7 4 7788999999 799999999999999999987
No 58
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.31 E-value=3e-11 Score=126.01 Aligned_cols=114 Identities=10% Similarity=0.031 Sum_probs=97.6
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCC-EEEEEeCC-cEEEEeCCC----CeeEEEEeccC
Q 006939 1 MSGYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGR-TLLCGLHE-SLKVFSWEP----IRCHDAVDVGW 74 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~-~LvSgs~D-sIrVWdl~s----g~~i~t~~~~~ 74 (625)
|++.+|++|+.|++|++||+ +++.+..+.+|...|.+++|+|++. ++++|+.| .|++||++. +.++..+ .+.
T Consensus 173 ~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~ 250 (383)
T 3ei3_B 173 VSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHE 250 (383)
T ss_dssp TTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECS
T ss_pred CCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCC
Confidence 68999999999999999999 5888999999999999999999999 89999999 999999987 6666666 467
Q ss_pred CceeEEEe-c-CCCEEEEeeCCCeEEEEeccCCccccccccceeEEeccCC
Q 006939 75 SRLSDLNV-H-EGKLLGCSYNQSCVGVWVVDISRIEPYTIGSVTRVNGLSE 123 (625)
Q Consensus 75 s~v~~l~~-~-dg~lL~sg~~Dg~V~vWdv~~~~~~~~~~~~i~~l~gHs~ 123 (625)
..+..+.| + ++.+|++++.|+.|++||+. .+.....+.+|..
T Consensus 251 ~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~-------~~~~~~~~~~~~~ 294 (383)
T 3ei3_B 251 KPVNAAYFNPTDSTKLLTTDQRNEIRVYSSY-------DWSKPDQIIIHPH 294 (383)
T ss_dssp SCEEEEEECTTTSCEEEEEESSSEEEEEETT-------BTTSCSEEEECCB
T ss_pred CceEEEEEcCCCCCEEEEEcCCCcEEEEECC-------CCccccccccccc
Confidence 78889988 7 89999999999999999998 3334445555543
No 59
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.31 E-value=2.4e-11 Score=138.39 Aligned_cols=102 Identities=12% Similarity=0.159 Sum_probs=93.8
Q ss_pred CCCEEEEEeCCCeEEEEECCC-----CeEEEEeCCCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCeeEEEEeccCC
Q 006939 2 SGYFHFSGSADRTVKFWDLET-----FELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVDVGWS 75 (625)
Q Consensus 2 dG~lLASGS~D~tVkIWDL~t-----g~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~i~t~~~~~s 75 (625)
++.+|+|||.|++|++||+.+ +.+...+.+|...|.+++|+|+|.+|++|+.| +|+|||+.++.+...+..|..
T Consensus 394 ~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~ 473 (694)
T 3dm0_A 394 NADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTK 473 (694)
T ss_dssp CCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSS
T ss_pred CCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCC
Confidence 357999999999999999976 34567889999999999999999999999999 999999999999999999999
Q ss_pred ceeEEEe-cCCCEEEEeeCCCeEEEEecc
Q 006939 76 RLSDLNV-HEGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 76 ~v~~l~~-~dg~lL~sg~~Dg~V~vWdv~ 103 (625)
.|.++.| +++.+|++++.|+.|++||+.
T Consensus 474 ~v~~~~~s~~~~~l~s~s~D~~i~iwd~~ 502 (694)
T 3dm0_A 474 DVLSVAFSLDNRQIVSASRDRTIKLWNTL 502 (694)
T ss_dssp CEEEEEECTTSSCEEEEETTSCEEEECTT
T ss_pred CEEEEEEeCCCCEEEEEeCCCEEEEEECC
Confidence 9999998 799999999999999999975
No 60
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.31 E-value=3.2e-11 Score=125.49 Aligned_cols=111 Identities=20% Similarity=0.263 Sum_probs=98.5
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCeEEEEeCC---C---CCCeEEEEEcCCCCEEEEEeCC----cEEEEeCCCCeeEEEE
Q 006939 1 MSGYFHFSGSADRTVKFWDLETFELIGSAGP---E---TSGVRCLTFNPDGRTLLCGLHE----SLKVFSWEPIRCHDAV 70 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~tg~~i~tl~~---h---~~~V~sv~fsPdg~~LvSgs~D----sIrVWdl~sg~~i~t~ 70 (625)
|+| +|++|+.|+.|++||+++++.+..+.. | ...|.+++|+|++.+|++++.| .|++||+.+++++..+
T Consensus 196 ~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~ 274 (397)
T 1sq9_A 196 ERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSL 274 (397)
T ss_dssp TTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEE
T ss_pred CCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCccccee
Confidence 678 999999999999999999999999998 9 9999999999999999998875 7999999999998888
Q ss_pred ec-------------cCCceeEEEe-cCCCEEEEeeCCCeEEEEeccCCccccccccceeEEe
Q 006939 71 DV-------------GWSRLSDLNV-HEGKLLGCSYNQSCVGVWVVDISRIEPYTIGSVTRVN 119 (625)
Q Consensus 71 ~~-------------~~s~v~~l~~-~dg~lL~sg~~Dg~V~vWdv~~~~~~~~~~~~i~~l~ 119 (625)
.. +...+..+.+ +++.+|++++.|+.|++||+. .+..+..+.
T Consensus 275 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~-------~~~~~~~~~ 330 (397)
T 1sq9_A 275 SVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVK-------TKERITTLN 330 (397)
T ss_dssp CBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETT-------TTEEEEEEE
T ss_pred ccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcC-------CCceeEEEe
Confidence 77 7888999998 799999999999999999997 334455555
No 61
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.31 E-value=1.9e-11 Score=127.23 Aligned_cols=103 Identities=18% Similarity=0.208 Sum_probs=95.7
Q ss_pred CCCCEEEEEeCC---CeEEEEECCCCeEEEEeCC-------------CCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCC
Q 006939 1 MSGYFHFSGSAD---RTVKFWDLETFELIGSAGP-------------ETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEP 63 (625)
Q Consensus 1 PdG~lLASGS~D---~tVkIWDL~tg~~i~tl~~-------------h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~s 63 (625)
|++.+|++|+.| +.|++||+.+++++..+.+ |...|.+++|+|++.+|++|+.| .|+|||+..
T Consensus 243 ~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 322 (397)
T 1sq9_A 243 PQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKT 322 (397)
T ss_dssp SSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTT
T ss_pred CCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCC
Confidence 689999999999 9999999999999999998 99999999999999999999998 999999999
Q ss_pred CeeEEEEe------cc---------------CCceeEEEe-cCC----------CEEEEeeCCCeEEEEecc
Q 006939 64 IRCHDAVD------VG---------------WSRLSDLNV-HEG----------KLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 64 g~~i~t~~------~~---------------~s~v~~l~~-~dg----------~lL~sg~~Dg~V~vWdv~ 103 (625)
++++..+. .+ ...+..+.+ +++ .+|++++.|+.|++|++.
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~ 394 (397)
T 1sq9_A 323 KERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREA 394 (397)
T ss_dssp TEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEE
T ss_pred CceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcC
Confidence 99998887 66 788999998 666 799999999999999986
No 62
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.31 E-value=3.3e-11 Score=122.21 Aligned_cols=102 Identities=23% Similarity=0.318 Sum_probs=87.9
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeCCcEEEEeCCCCeeEEEE---------e
Q 006939 1 MSGYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFSWEPIRCHDAV---------D 71 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~DsIrVWdl~sg~~i~t~---------~ 71 (625)
|+|.+|++|+.|++|++||+.+++++..+.++ ..|.++.|+|++.+++++.++.|++||++.+.++..+ .
T Consensus 225 ~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 303 (340)
T 4aow_A 225 PDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG-DIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSK 303 (340)
T ss_dssp TTSSEEEEEETTCEEEEEETTTTEEEEEEECS-SCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEECCC-------
T ss_pred CCCCEEEEEeCCCeEEEEEeccCceeeeecCC-ceEEeeecCCCCceeeccCCCEEEEEECCCCeEEEeccccceeeecc
Confidence 68999999999999999999999999988765 6899999999987776655449999999988776554 2
Q ss_pred ccCCceeEEEe-cCCCEEEEeeCCCeEEEEecc
Q 006939 72 VGWSRLSDLNV-HEGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 72 ~~~s~v~~l~~-~dg~lL~sg~~Dg~V~vWdv~ 103 (625)
.+...|..+.| +++++|++|+.|+.|++||+.
T Consensus 304 ~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~ 336 (340)
T 4aow_A 304 AEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVT 336 (340)
T ss_dssp CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEE
T ss_pred CCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCC
Confidence 45667888888 799999999999999999987
No 63
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.29 E-value=3e-11 Score=129.33 Aligned_cols=102 Identities=14% Similarity=0.230 Sum_probs=96.1
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCeeEEEEeccCCceeE
Q 006939 1 MSGYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVDVGWSRLSD 79 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~i~t~~~~~s~v~~ 79 (625)
+++.+|++|+.|++|++||+.+++++..+.+|...|.+++|+|++.++++|+.| .|++||+++++++..+..+...+..
T Consensus 278 ~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~ 357 (464)
T 3v7d_B 278 GHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGL 357 (464)
T ss_dssp EETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEE
T ss_pred CCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEE
Confidence 367899999999999999999999999999999999999999999999999999 9999999999999999888888988
Q ss_pred EEecCCCEEEEeeCCCeEEEEecc
Q 006939 80 LNVHEGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 80 l~~~dg~lL~sg~~Dg~V~vWdv~ 103 (625)
+.+. +.+|++++.|+.|++||+.
T Consensus 358 ~~~~-~~~l~s~s~dg~v~vwd~~ 380 (464)
T 3v7d_B 358 LRLS-DKFLVSAAADGSIRGWDAN 380 (464)
T ss_dssp EEEC-SSEEEEEETTSEEEEEETT
T ss_pred EEEc-CCEEEEEeCCCcEEEEECC
Confidence 8875 7899999999999999987
No 64
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.29 E-value=1e-10 Score=117.99 Aligned_cols=118 Identities=21% Similarity=0.270 Sum_probs=100.8
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCeeEEEEeccCCceeE
Q 006939 1 MSGYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVDVGWSRLSD 79 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~i~t~~~~~s~v~~ 79 (625)
|++.+|++|+.|+.|++||+++++.+..+.+|...|.+++|+|++.++++++.| .|++||++.+++...+. +...+..
T Consensus 151 ~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~~v~~ 229 (337)
T 1gxr_A 151 PDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD-FTSQIFS 229 (337)
T ss_dssp TTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEE
T ss_pred CCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeec-CCCceEE
Confidence 689999999999999999999999999999999999999999999999999998 99999999999887765 3456778
Q ss_pred EEe-cCCCEEEEeeCCCeEEEEeccCCccccccccceeEEeccCCCccc
Q 006939 80 LNV-HEGKLLGCSYNQSCVGVWVVDISRIEPYTIGSVTRVNGLSESKSS 127 (625)
Q Consensus 80 l~~-~dg~lL~sg~~Dg~V~vWdv~~~~~~~~~~~~i~~l~gHs~~v~~ 127 (625)
+.+ +++.+|++++.++.|++||+... ....+.+|...+..
T Consensus 230 ~~~s~~~~~l~~~~~~~~i~~~~~~~~--------~~~~~~~~~~~v~~ 270 (337)
T 1gxr_A 230 LGYCPTGEWLAVGMESSNVEVLHVNKP--------DKYQLHLHESCVLS 270 (337)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTSS--------CEEEECCCSSCEEE
T ss_pred EEECCCCCEEEEEcCCCcEEEEECCCC--------CeEEEcCCccceeE
Confidence 887 79999999999999999998722 23345556555443
No 65
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.29 E-value=1.1e-11 Score=128.51 Aligned_cols=103 Identities=12% Similarity=0.124 Sum_probs=85.7
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCeEE-EEeCC-CCCCeEEEEEcCCCCEEEEEeCCcEEEEeCCCCeeEEEEec---cCC
Q 006939 1 MSGYFHFSGSADRTVKFWDLETFELI-GSAGP-ETSGVRCLTFNPDGRTLLCGLHESLKVFSWEPIRCHDAVDV---GWS 75 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~tg~~i-~tl~~-h~~~V~sv~fsPdg~~LvSgs~DsIrVWdl~sg~~i~t~~~---~~s 75 (625)
|||.+||+|+.|++|++||+++++.+ ..+.+ |...|.+++|+|+|.+|++++++.|++||++.+.+...+.. +..
T Consensus 180 pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~~~v~iwd~~~~~~~~~~~~~~~~~~ 259 (343)
T 3lrv_A 180 KDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVECDQTVVCFDLRKDVGTLAYPTYTIPEF 259 (343)
T ss_dssp TTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEESSBEEEEETTSSTTCBSSCCCBC---
T ss_pred CCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEeCCeEEEEEcCCCCcceeecccccccc
Confidence 78999999999999999999999987 78888 99999999999999999999966999999998876543321 212
Q ss_pred cee--EEEe-cCCCEEEEeeC-CCeEEEEecc
Q 006939 76 RLS--DLNV-HEGKLLGCSYN-QSCVGVWVVD 103 (625)
Q Consensus 76 ~v~--~l~~-~dg~lL~sg~~-Dg~V~vWdv~ 103 (625)
.+. .+.| +++++|++++. |+.|++|+++
T Consensus 260 ~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~ 291 (343)
T 3lrv_A 260 KTGTVTYDIDDSGKNMIAYSNESNSLTIYKFD 291 (343)
T ss_dssp --CCEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred cccceEEEECCCCCEEEEecCCCCcEEEEEEc
Confidence 222 4666 79999999888 9999999986
No 66
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.29 E-value=2.1e-11 Score=134.04 Aligned_cols=102 Identities=18% Similarity=0.271 Sum_probs=95.8
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCeEEEEeCC-CCCCeEEEEEcC----------CCCEEEEEeCC-cEEEEeCCCC-eeE
Q 006939 1 MSGYFHFSGSADRTVKFWDLETFELIGSAGP-ETSGVRCLTFNP----------DGRTLLCGLHE-SLKVFSWEPI-RCH 67 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~tg~~i~tl~~-h~~~V~sv~fsP----------dg~~LvSgs~D-sIrVWdl~sg-~~i 67 (625)
|||++|++|+.|+.|++||+.+++++..+.+ |...|.+++|+| ++.+|++|+.| .|++||+..+ +++
T Consensus 498 ~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~ 577 (615)
T 1pgu_A 498 PSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKII 577 (615)
T ss_dssp TTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCE
T ss_pred CCCCEEEEcCCCCeEEEeeCCCCcceeEeecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCceec
Confidence 6899999999999999999999999999988 999999999999 99999999999 9999999987 788
Q ss_pred EEEeccCCceeEEEe-cCCCEEEEeeCCCeEEEEecc
Q 006939 68 DAVDVGWSRLSDLNV-HEGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 68 ~t~~~~~s~v~~l~~-~dg~lL~sg~~Dg~V~vWdv~ 103 (625)
..+..|...+..+.| +++. |++++.|+.|++|+++
T Consensus 578 ~~~~~h~~~v~~l~~s~~~~-l~s~~~d~~v~iw~~~ 613 (615)
T 1pgu_A 578 KALNAHKDGVNNLLWETPST-LVSSGADACIKRWNVV 613 (615)
T ss_dssp EETTSSTTCEEEEEEEETTE-EEEEETTSCEEEEEEC
T ss_pred hhhhcCccceEEEEEcCCCC-eEEecCCceEEEEeee
Confidence 888888889999998 7888 9999999999999986
No 67
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.28 E-value=4.4e-11 Score=119.97 Aligned_cols=102 Identities=16% Similarity=0.235 Sum_probs=87.0
Q ss_pred CCCEEEEEeCCCeEEEEECCCC---------eEEEEeCCCCCCeEEEEEcCC--CCEEEEEeCC-cEEEEeCCCCee---
Q 006939 2 SGYFHFSGSADRTVKFWDLETF---------ELIGSAGPETSGVRCLTFNPD--GRTLLCGLHE-SLKVFSWEPIRC--- 66 (625)
Q Consensus 2 dG~lLASGS~D~tVkIWDL~tg---------~~i~tl~~h~~~V~sv~fsPd--g~~LvSgs~D-sIrVWdl~sg~~--- 66 (625)
|+.+|++|+.|++|++||+.++ +.+..+.+|...|.+++|+|+ +.++++|+.| .|++||++.+++
T Consensus 70 d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~ 149 (351)
T 3f3f_A 70 YGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRS 149 (351)
T ss_dssp GCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTC
T ss_pred CCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhcc
Confidence 6899999999999999999887 668889999999999999999 9999999998 999999865432
Q ss_pred ---------------------------------------------------------EEEEeccCCceeEEEe-cCC---
Q 006939 67 ---------------------------------------------------------HDAVDVGWSRLSDLNV-HEG--- 85 (625)
Q Consensus 67 ---------------------------------------------------------i~t~~~~~s~v~~l~~-~dg--- 85 (625)
+..+..+...+..+.+ +++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~ 229 (351)
T 3f3f_A 150 WTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRW 229 (351)
T ss_dssp CEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCS
T ss_pred ccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCc
Confidence 1222345667888888 566
Q ss_pred -CEEEEeeCCCeEEEEecc
Q 006939 86 -KLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 86 -~lL~sg~~Dg~V~vWdv~ 103 (625)
.+|++++.|+.|++||+.
T Consensus 230 ~~~l~s~~~dg~i~iwd~~ 248 (351)
T 3f3f_A 230 YQLIATGCKDGRIRIFKIT 248 (351)
T ss_dssp SEEEEEEETTSCEEEEEEE
T ss_pred ceEEEEEcCCCeEEEEeCC
Confidence 799999999999999998
No 68
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.28 E-value=3.6e-11 Score=125.05 Aligned_cols=102 Identities=12% Similarity=0.140 Sum_probs=95.9
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCeeEEEEeccCCceeE
Q 006939 1 MSGYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVDVGWSRLSD 79 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~i~t~~~~~s~v~~ 79 (625)
|++.+|++|+.|+.|++||+.+++.+..+.+|...|.+++|+|++ ++++++.| .|++||+.+++++..+..+...+..
T Consensus 257 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~ 335 (425)
T 1r5m_A 257 DTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFA 335 (425)
T ss_dssp TTTTEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEE
T ss_pred CCCCEEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEE
Confidence 688999999999999999999999999999999999999999999 88999988 9999999999999888888888999
Q ss_pred EEe-cCCCEEEEeeCCCeEEEEecc
Q 006939 80 LNV-HEGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 80 l~~-~dg~lL~sg~~Dg~V~vWdv~ 103 (625)
+.+ +++.+|++++.|+.|++||+.
T Consensus 336 ~~~s~~~~~l~~~~~dg~i~i~~~~ 360 (425)
T 1r5m_A 336 GRISQDGQKYAVAFMDGQVNVYDLK 360 (425)
T ss_dssp EEECTTSSEEEEEETTSCEEEEECH
T ss_pred EEEcCCCCEEEEEECCCeEEEEECC
Confidence 988 789999999999999999998
No 69
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.28 E-value=2.1e-11 Score=124.47 Aligned_cols=101 Identities=16% Similarity=0.265 Sum_probs=89.0
Q ss_pred CCCEEEEEeCCCeEEEEECCCCeEEEEe---CCCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCeeEEEEe------
Q 006939 2 SGYFHFSGSADRTVKFWDLETFELIGSA---GPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVD------ 71 (625)
Q Consensus 2 dG~lLASGS~D~tVkIWDL~tg~~i~tl---~~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~i~t~~------ 71 (625)
++.+|++|+.|++|++||+.+++.+..+ .+|...|.+++|+|++.+|++|+.| .|++||++.+++...+.
T Consensus 127 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 206 (366)
T 3k26_A 127 DPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYN 206 (366)
T ss_dssp CTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCC
T ss_pred CCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEec
Confidence 7899999999999999999999999888 7899999999999999999999998 99999998765543222
Q ss_pred ----------------------ccCCceeEEEecCCCEEEEeeCCCeEEEEecc
Q 006939 72 ----------------------VGWSRLSDLNVHEGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 72 ----------------------~~~s~v~~l~~~dg~lL~sg~~Dg~V~vWdv~ 103 (625)
.+...+..+.+. +.+|++++.|+.|++||+.
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~d~~i~~wd~~ 259 (366)
T 3k26_A 207 PNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL-GDLILSKSCENAIVCWKPG 259 (366)
T ss_dssp GGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE-TTEEEEECSSSEEEEEEES
T ss_pred CCCCcccccceeeccCccccccCCcceEEEEEEc-CCEEEEEecCCEEEEEeCC
Confidence 266778888876 7899999999999999987
No 70
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.28 E-value=7.6e-11 Score=124.72 Aligned_cols=120 Identities=15% Similarity=0.211 Sum_probs=103.6
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCC-CCeeEEEEeccCCcee
Q 006939 1 MSGYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWE-PIRCHDAVDVGWSRLS 78 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~-sg~~i~t~~~~~s~v~ 78 (625)
|+|.+|++|+.|+.|++||+.+++.+..+.+|...|.++.| ++.++++|+.| .|++||++ .+.....+..+...+.
T Consensus 144 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~ 221 (401)
T 4aez_A 144 HDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVC 221 (401)
T ss_dssp TTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEE
T ss_pred CCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEE--CCCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCee
Confidence 68999999999999999999999999999999999999999 56799999999 99999998 4666777778888899
Q ss_pred EEEe-cCCCEEEEeeCCCeEEEEeccCCccccccccceeEEeccCCCccccc
Q 006939 79 DLNV-HEGKLLGCSYNQSCVGVWVVDISRIEPYTIGSVTRVNGLSESKSSAS 129 (625)
Q Consensus 79 ~l~~-~dg~lL~sg~~Dg~V~vWdv~~~~~~~~~~~~i~~l~gHs~~v~~~~ 129 (625)
.+.+ +++.+|++++.|+.|++||+. .......+.+|...+....
T Consensus 222 ~~~~~~~~~~l~s~~~d~~v~iwd~~-------~~~~~~~~~~~~~~v~~~~ 266 (401)
T 4aez_A 222 GLAWRSDGLQLASGGNDNVVQIWDAR-------SSIPKFTKTNHNAAVKAVA 266 (401)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETT-------CSSEEEEECCCSSCCCEEE
T ss_pred EEEEcCCCCEEEEEeCCCeEEEccCC-------CCCccEEecCCcceEEEEE
Confidence 9998 699999999999999999998 3445556667766655443
No 71
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.27 E-value=5.6e-11 Score=127.15 Aligned_cols=119 Identities=20% Similarity=0.268 Sum_probs=104.6
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCeeEEEEeccCCceeE
Q 006939 1 MSGYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVDVGWSRLSD 79 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~i~t~~~~~s~v~~ 79 (625)
++|.+|++|+.|++|++||+.+++++..+.+|...|.++.|+ +.++++|+.| +|++||+.+++++..+..+...+..
T Consensus 127 ~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~ 204 (445)
T 2ovr_B 127 FCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRC 204 (445)
T ss_dssp EETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEE
T ss_pred EcCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEE
Confidence 368899999999999999999999999999999999999997 6799999999 9999999999999999888888988
Q ss_pred EEecCCCEEEEeeCCCeEEEEeccCCccccccccceeEEeccCCCccccc
Q 006939 80 LNVHEGKLLGCSYNQSCVGVWVVDISRIEPYTIGSVTRVNGLSESKSSAS 129 (625)
Q Consensus 80 l~~~dg~lL~sg~~Dg~V~vWdv~~~~~~~~~~~~i~~l~gHs~~v~~~~ 129 (625)
+.+ ++..+++|+.|+.|++||+. .+..+..+.+|...+....
T Consensus 205 ~~~-~~~~l~s~s~dg~i~~wd~~-------~~~~~~~~~~~~~~v~~~~ 246 (445)
T 2ovr_B 205 MHL-HEKRVVSGSRDATLRVWDIE-------TGQCLHVLMGHVAAVRCVQ 246 (445)
T ss_dssp EEE-ETTEEEEEETTSEEEEEESS-------SCCEEEEEECCSSCEEEEE
T ss_pred EEe-cCCEEEEEeCCCEEEEEECC-------CCcEEEEEcCCcccEEEEE
Confidence 887 46789999999999999987 4456677778877765543
No 72
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.27 E-value=1.4e-11 Score=145.86 Aligned_cols=126 Identities=15% Similarity=0.216 Sum_probs=97.0
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCeEE----EE--e-----CCCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCC----
Q 006939 1 MSGYFHFSGSADRTVKFWDLETFELI----GS--A-----GPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPI---- 64 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~tg~~i----~t--l-----~~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg---- 64 (625)
|||++||||+.|++|++||+.++... .. + .+|...|.+++|+|||++|++|+.| +|+||++.++
T Consensus 445 pdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~ 524 (902)
T 2oaj_A 445 EYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYS 524 (902)
T ss_dssp SEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC--
T ss_pred ccCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccC
Confidence 57899999999999999999887421 11 1 1788999999999999999999999 9999999765
Q ss_pred -----------------------------------------eeEEEEeccCCceeEEEe-cCCCEEEEeeCCCeEEEEec
Q 006939 65 -----------------------------------------RCHDAVDVGWSRLSDLNV-HEGKLLGCSYNQSCVGVWVV 102 (625)
Q Consensus 65 -----------------------------------------~~i~t~~~~~s~v~~l~~-~dg~lL~sg~~Dg~V~vWdv 102 (625)
+|+.++..|...|..++| ++| +|++|+.|++|++||+
T Consensus 525 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~ 603 (902)
T 2oaj_A 525 VENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGIAYAAGSLMLIDR 603 (902)
T ss_dssp -------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEEEETTSEEEEEET
T ss_pred ccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-EEEEEeCCCcEEEEEC
Confidence 245667778888999998 788 9999999999999998
Q ss_pred cCCccccccccceeEEe-ccCCCccccc
Q 006939 103 DISRIEPYTIGSVTRVN-GLSESKSSAS 129 (625)
Q Consensus 103 ~~~~~~~~~~~~i~~l~-gHs~~v~~~~ 129 (625)
+..... +. ..+..+. +|..++....
T Consensus 604 ~~~~~~-~~-~~~~~~~~gh~~~V~sv~ 629 (902)
T 2oaj_A 604 RGPAII-YM-ENIREISGAQSACVTCIE 629 (902)
T ss_dssp TTTEEE-EE-EEGGGTCSSCCCCEEEEE
T ss_pred CCCeEE-EE-eehhHhccccccceEEEE
Confidence 721110 00 0112333 7777776544
No 73
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.27 E-value=8.2e-11 Score=118.61 Aligned_cols=103 Identities=15% Similarity=0.233 Sum_probs=94.9
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCe--EEEEeCCCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCeeEEEEeccCCce
Q 006939 1 MSGYFHFSGSADRTVKFWDLETFE--LIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVDVGWSRL 77 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~tg~--~i~tl~~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~i~t~~~~~s~v 77 (625)
|+|++|++|+.|++|++||+.+++ ....+..|...|.+++|+|++.++++++.| .|++||+++++....+..+...+
T Consensus 107 ~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i 186 (337)
T 1gxr_A 107 PDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGA 186 (337)
T ss_dssp TTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCE
T ss_pred CCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCce
Confidence 689999999999999999999887 667788899999999999999999999998 99999999999998888888889
Q ss_pred eEEEe-cCCCEEEEeeCCCeEEEEecc
Q 006939 78 SDLNV-HEGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 78 ~~l~~-~dg~lL~sg~~Dg~V~vWdv~ 103 (625)
..+.+ +++.+|++++.|+.|++||++
T Consensus 187 ~~~~~~~~~~~l~~~~~dg~i~~~d~~ 213 (337)
T 1gxr_A 187 SCIDISNDGTKLWTGGLDNTVRSWDLR 213 (337)
T ss_dssp EEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred EEEEECCCCCEEEEEecCCcEEEEECC
Confidence 99988 789999999999999999987
No 74
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.27 E-value=4.5e-11 Score=119.47 Aligned_cols=100 Identities=16% Similarity=0.261 Sum_probs=90.3
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCeeEEEEeccCCceeE
Q 006939 1 MSGYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVDVGWSRLSD 79 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~i~t~~~~~s~v~~ 79 (625)
|++. |++|+.|+.|++||+.+++++..+.+|...|.+++|+|++ .+++|+.| .|++||+.++++...+..+...+..
T Consensus 194 ~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~ 271 (313)
T 3odt_A 194 DDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQVITLPAISIWS 271 (313)
T ss_dssp ETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCCEEEEEECSSSCEEE
T ss_pred CCCe-EEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCC-CEEEEecCCEEEEEECCCCceeEEEeccCceEEE
Confidence 4566 8999999999999999999999999999999999999999 57788888 9999999999999999888888999
Q ss_pred EEe-cCCCEEEEeeCCCeEEEEecc
Q 006939 80 LNV-HEGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 80 l~~-~dg~lL~sg~~Dg~V~vWdv~ 103 (625)
+.+ ++++ +++++.|+.|++||+.
T Consensus 272 ~~~~~~~~-~~~~~~dg~i~iw~~~ 295 (313)
T 3odt_A 272 VDCMSNGD-IIVGSSDNLVRIFSQE 295 (313)
T ss_dssp EEECTTSC-EEEEETTSCEEEEESC
T ss_pred EEEccCCC-EEEEeCCCcEEEEeCC
Confidence 998 6777 5678899999999988
No 75
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.27 E-value=1.2e-10 Score=116.90 Aligned_cols=116 Identities=11% Similarity=0.178 Sum_probs=95.3
Q ss_pred CEEEEEeCCCeEEEEECCCCeEEEEe--CCCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCeeEEEEeccCCceeEE
Q 006939 4 YFHFSGSADRTVKFWDLETFELIGSA--GPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVDVGWSRLSDL 80 (625)
Q Consensus 4 ~lLASGS~D~tVkIWDL~tg~~i~tl--~~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~i~t~~~~~s~v~~l 80 (625)
.+||+|. |++|+|||+.+++++..+ .+|...|.+++|+|++++|++|+.| +|++|++++++++..+..|...+..+
T Consensus 37 ~~lAvg~-D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~ 115 (318)
T 4ggc_A 37 NVLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSL 115 (318)
T ss_dssp SEEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEE
T ss_pred CEEEEEe-CCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEe
Confidence 4677765 999999999999998876 4677889999999999999999999 99999999999999998887777665
Q ss_pred EecCCCEEEEeeCCCeEEEEeccCCccccccccceeEEeccCCCccc
Q 006939 81 NVHEGKLLGCSYNQSCVGVWVVDISRIEPYTIGSVTRVNGLSESKSS 127 (625)
Q Consensus 81 ~~~dg~lL~sg~~Dg~V~vWdv~~~~~~~~~~~~i~~l~gHs~~v~~ 127 (625)
. .++.++++++.++.+.+|+.... ...+..+.+|...+..
T Consensus 116 ~-~~~~~l~s~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~ 155 (318)
T 4ggc_A 116 S-WNSYILSSGSRSGHIHHHDVRVA------EHHVATLSGHSQEVCG 155 (318)
T ss_dssp E-EETTEEEEEETTSEEEEEETTSS------SCEEEEEECCSSCEEE
T ss_pred e-cCCCEEEEEecCCceEeeecCCC------ceeEEEEcCccCceEE
Confidence 5 46789999999999999987621 2345566677665544
No 76
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.26 E-value=8.9e-11 Score=120.57 Aligned_cols=120 Identities=15% Similarity=0.068 Sum_probs=100.7
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCe----EEEEeCCCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCC-------------
Q 006939 1 MSGYFHFSGSADRTVKFWDLETFE----LIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWE------------- 62 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~tg~----~i~tl~~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~------------- 62 (625)
|+|.+|++|+.|+.|++||+..+. ......+|...|.+++|+|++.+|++|+.| .|++||++
T Consensus 106 ~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~ 185 (372)
T 1k8k_C 106 PNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPW 185 (372)
T ss_dssp TTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTT
T ss_pred CCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEccccccccccccccc
Confidence 689999999999999999998876 233347789999999999999999999998 99999953
Q ss_pred -----CCeeEEEEeccCCceeEEEe-cCCCEEEEeeCCCeEEEEeccCCccccccccceeEEeccCCCccc
Q 006939 63 -----PIRCHDAVDVGWSRLSDLNV-HEGKLLGCSYNQSCVGVWVVDISRIEPYTIGSVTRVNGLSESKSS 127 (625)
Q Consensus 63 -----sg~~i~t~~~~~s~v~~l~~-~dg~lL~sg~~Dg~V~vWdv~~~~~~~~~~~~i~~l~gHs~~v~~ 127 (625)
.+.++..+..+...+..+.+ +++.+|++++.|+.|++||+. .+..+..+.+|...+..
T Consensus 186 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~-------~~~~~~~~~~~~~~v~~ 249 (372)
T 1k8k_C 186 GSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADAD-------KKMAVATLASETLPLLA 249 (372)
T ss_dssp BSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGG-------GTTEEEEEECSSCCEEE
T ss_pred ccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECC-------CCceeEEEccCCCCeEE
Confidence 67778777778888999988 789999999999999999997 34556666777655543
No 77
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.26 E-value=6.3e-11 Score=123.59 Aligned_cols=120 Identities=9% Similarity=0.050 Sum_probs=98.9
Q ss_pred CCC-CEEEEEeCCCeEEEEECCCCeEEEEeC--CCCCCeEEEEEcC-CCCEEEEEeCC-cEEEEeCCCCeeEEEEecc--
Q 006939 1 MSG-YFHFSGSADRTVKFWDLETFELIGSAG--PETSGVRCLTFNP-DGRTLLCGLHE-SLKVFSWEPIRCHDAVDVG-- 73 (625)
Q Consensus 1 PdG-~lLASGS~D~tVkIWDL~tg~~i~tl~--~h~~~V~sv~fsP-dg~~LvSgs~D-sIrVWdl~sg~~i~t~~~~-- 73 (625)
|+| .+|++|+.|++|+|||+.+++....+. +|...|.+++|+| ++.+|++|+.| .|++||+.. .+...+..+
T Consensus 83 ~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~~ 161 (383)
T 3ei3_B 83 PTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG-SVIQVFAKTDS 161 (383)
T ss_dssp SSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTS-CEEEEEECCCC
T ss_pred CCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCC-CceEEEeccCC
Confidence 577 899999999999999999888777665 6999999999999 78999999999 999999996 444444333
Q ss_pred -CCceeEEEe-cCCCEEEEeeCCCeEEEEeccCCccccccccceeEEeccCCCccccc
Q 006939 74 -WSRLSDLNV-HEGKLLGCSYNQSCVGVWVVDISRIEPYTIGSVTRVNGLSESKSSAS 129 (625)
Q Consensus 74 -~s~v~~l~~-~dg~lL~sg~~Dg~V~vWdv~~~~~~~~~~~~i~~l~gHs~~v~~~~ 129 (625)
...+..+.+ +++.+|++++.|+.|++||++ +..+..+.+|...+....
T Consensus 162 ~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~--------~~~~~~~~~h~~~v~~~~ 211 (383)
T 3ei3_B 162 WDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD--------GHEIFKEKLHKAKVTHAE 211 (383)
T ss_dssp SSCCEEEEEEETTTTEEEEEETTSEEEEEETT--------SCEEEEEECSSSCEEEEE
T ss_pred CCCCeEEEEECCCCCEEEEECCCCCEEEEECC--------CCEEEEeccCCCcEEEEE
Confidence 256788887 799999999999999999985 345667778877766544
No 78
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.26 E-value=4.4e-11 Score=122.89 Aligned_cols=103 Identities=6% Similarity=0.017 Sum_probs=93.3
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCe--EEEEeCCCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCeeEEEE--eccCC
Q 006939 1 MSGYFHFSGSADRTVKFWDLETFE--LIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAV--DVGWS 75 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~tg~--~i~tl~~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~i~t~--~~~~s 75 (625)
|||.+|++|+.|++|++||+.+++ ++..+.+|...|.+++|+|++.+|++|+.| .|++||++++++...+ ..+..
T Consensus 18 ~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~ 97 (372)
T 1k8k_C 18 KDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINR 97 (372)
T ss_dssp TTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSS
T ss_pred CCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCC
Confidence 689999999999999999999988 888999999999999999999999999998 9999999988765544 34667
Q ss_pred ceeEEEe-cCCCEEEEeeCCCeEEEEecc
Q 006939 76 RLSDLNV-HEGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 76 ~v~~l~~-~dg~lL~sg~~Dg~V~vWdv~ 103 (625)
.+..+.+ +++.+|++++.|+.|++||++
T Consensus 98 ~v~~~~~~~~~~~l~~~~~d~~v~i~d~~ 126 (372)
T 1k8k_C 98 AARCVRWAPNEKKFAVGSGSRVISICYFE 126 (372)
T ss_dssp CEEEEEECTTSSEEEEEETTSSEEEEEEE
T ss_pred ceeEEEECCCCCEEEEEeCCCEEEEEEec
Confidence 7888888 789999999999999999998
No 79
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.26 E-value=9.5e-11 Score=125.34 Aligned_cols=121 Identities=18% Similarity=0.271 Sum_probs=102.2
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCeeEEEEeccCCceeE
Q 006939 1 MSGYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVDVGWSRLSD 79 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~i~t~~~~~s~v~~ 79 (625)
++|.+|++|+.|++|++||+.+++++..+.+|...|.++.| ++.++++|+.| .|++||+.+++++..+..+...+..
T Consensus 141 ~d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~ 218 (435)
T 1p22_A 141 YDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLH 218 (435)
T ss_dssp CCSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEE
T ss_pred ECCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEE
Confidence 37899999999999999999999999999999999999998 78899999999 9999999999999999888888999
Q ss_pred EEecCCCEEEEeeCCCeEEEEeccCCccccccccceeEEeccCCCcccc
Q 006939 80 LNVHEGKLLGCSYNQSCVGVWVVDISRIEPYTIGSVTRVNGLSESKSSA 128 (625)
Q Consensus 80 l~~~dg~lL~sg~~Dg~V~vWdv~~~~~~~~~~~~i~~l~gHs~~v~~~ 128 (625)
+.+. +.++++|+.|+.|++||+..... ......+.+|...+...
T Consensus 219 l~~~-~~~l~s~s~dg~i~vwd~~~~~~----~~~~~~~~~~~~~v~~~ 262 (435)
T 1p22_A 219 LRFN-NGMMVTCSKDRSIAVWDMASPTD----ITLRRVLVGHRAAVNVV 262 (435)
T ss_dssp EECC-TTEEEEEETTSCEEEEECSSSSC----CEEEEEECCCSSCEEEE
T ss_pred EEEc-CCEEEEeeCCCcEEEEeCCCCCC----ceeeeEecCCCCcEEEE
Confidence 8874 56899999999999999872211 11124566776665543
No 80
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.26 E-value=1.2e-10 Score=117.95 Aligned_cols=100 Identities=18% Similarity=0.291 Sum_probs=87.8
Q ss_pred CCEEEEEeCCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCeeEEEEeccCCceeEEE
Q 006939 3 GYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVDVGWSRLSDLN 81 (625)
Q Consensus 3 G~lLASGS~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~i~t~~~~~s~v~~l~ 81 (625)
+.++++|+.|++|++||+.+++++..+.+|...|.+++|+|++.+|++|+.| .|++||++.++++..+..+ ..+..+.
T Consensus 185 ~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~-~~v~~~~ 263 (340)
T 4aow_A 185 NPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG-DIINALC 263 (340)
T ss_dssp SCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECS-SCEEEEE
T ss_pred CcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCC-ceEEeee
Confidence 5678999999999999999999999999999999999999999999999999 9999999999998877654 4577777
Q ss_pred ecCCCEEEEeeCCCeEEEEecc
Q 006939 82 VHEGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 82 ~~dg~lL~sg~~Dg~V~vWdv~ 103 (625)
+..+..+++++.|+.|++||++
T Consensus 264 ~~~~~~~~~~~~d~~i~iwd~~ 285 (340)
T 4aow_A 264 FSPNRYWLCAATGPSIKIWDLE 285 (340)
T ss_dssp ECSSSSEEEEEETTEEEEEETT
T ss_pred cCCCCceeeccCCCEEEEEECC
Confidence 7444455566778999999987
No 81
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.25 E-value=1.1e-10 Score=124.34 Aligned_cols=118 Identities=12% Similarity=0.185 Sum_probs=98.8
Q ss_pred CCEEEEEeCCCeEEEEECCCCeEEEEe--CCCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCeeEEEEeccCCceeE
Q 006939 3 GYFHFSGSADRTVKFWDLETFELIGSA--GPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVDVGWSRLSD 79 (625)
Q Consensus 3 G~lLASGS~D~tVkIWDL~tg~~i~tl--~~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~i~t~~~~~s~v~~ 79 (625)
+.+||+|. |++|+|||+.+|+++..+ .+|...|.+|+|+|+|.+|++|+.| +|+|||+++++++..+..|...+..
T Consensus 116 ~n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~ 194 (420)
T 4gga_A 116 GNVLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGS 194 (420)
T ss_dssp TSEEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEE
T ss_pred CCEEEEEe-CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEE
Confidence 45777775 999999999999988765 4677889999999999999999999 9999999999999999888888887
Q ss_pred EEecCCCEEEEeeCCCeEEEEeccCCccccccccceeEEeccCCCcccc
Q 006939 80 LNVHEGKLLGCSYNQSCVGVWVVDISRIEPYTIGSVTRVNGLSESKSSA 128 (625)
Q Consensus 80 l~~~dg~lL~sg~~Dg~V~vWdv~~~~~~~~~~~~i~~l~gHs~~v~~~ 128 (625)
+.+ ++.+|++|+.|+.+++||.... ...+..+.+|...+...
T Consensus 195 ~s~-~~~~l~sgs~d~~i~~~d~~~~------~~~~~~~~~h~~~~~~~ 236 (420)
T 4gga_A 195 LSW-NSYILSSGSRSGHIHHHDVRVA------EHHVATLSGHSQEVCGL 236 (420)
T ss_dssp EEE-ETTEEEEEETTSEEEEEETTSS------SCEEEEEECCSSCEEEE
T ss_pred Eee-CCCEEEEEeCCCceeEeeeccc------ceeeEEecccccceeee
Confidence 775 6789999999999999998722 23456677777766543
No 82
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.25 E-value=4.2e-12 Score=141.74 Aligned_cols=103 Identities=5% Similarity=-0.038 Sum_probs=92.9
Q ss_pred CCC-CEEEEEeCCCeEEEEECCCCeEEEEeCCCCC--CeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCeeEEEEeccCCc
Q 006939 1 MSG-YFHFSGSADRTVKFWDLETFELIGSAGPETS--GVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVDVGWSR 76 (625)
Q Consensus 1 PdG-~lLASGS~D~tVkIWDL~tg~~i~tl~~h~~--~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~i~t~~~~~s~ 76 (625)
|+| ++|||||.|++|+|||+++++++..+.+|.. .|.+++|+|++..+++++.| +|++||++.+.+..++..|...
T Consensus 320 ~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~ 399 (524)
T 2j04_B 320 DFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETT 399 (524)
T ss_dssp TTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSC
T ss_pred CCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCc
Confidence 467 8999999999999999999888777777754 48899999999999999888 9999999999998888889899
Q ss_pred eeEEEe-cCCCEEEEeeCCCeEEEEecc
Q 006939 77 LSDLNV-HEGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 77 v~~l~~-~dg~lL~sg~~Dg~V~vWdv~ 103 (625)
|..+.| +++.+|++|+.|+.|++||+.
T Consensus 400 V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~ 427 (524)
T 2j04_B 400 ITAIGVSRLHPMVLAGSADGSLIITNAA 427 (524)
T ss_dssp EEEEECCSSCCBCEEEETTTEEECCBSC
T ss_pred eEEEEeCCCCCeEEEEECCCEEEEEech
Confidence 999999 799999999999999999976
No 83
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.25 E-value=9e-11 Score=120.34 Aligned_cols=125 Identities=17% Similarity=0.183 Sum_probs=100.8
Q ss_pred CCCEEEEEeCCCeEEEEECCCCe--EEEEeCCCCCCeEEEEEcCC--CCEEEEEeCC-cEEEEeCCCCee--EEEEeccC
Q 006939 2 SGYFHFSGSADRTVKFWDLETFE--LIGSAGPETSGVRCLTFNPD--GRTLLCGLHE-SLKVFSWEPIRC--HDAVDVGW 74 (625)
Q Consensus 2 dG~lLASGS~D~tVkIWDL~tg~--~i~tl~~h~~~V~sv~fsPd--g~~LvSgs~D-sIrVWdl~sg~~--i~t~~~~~ 74 (625)
++.+|++|+.|++|++||+.+++ .+..+.+|...|.+++|+|+ +.+|++++.| .|++||+..+.. ...+..+.
T Consensus 68 ~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~ 147 (379)
T 3jrp_A 68 FGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHA 147 (379)
T ss_dssp GCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCT
T ss_pred CCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCC
Confidence 38999999999999999999987 77888999999999999999 9999999999 999999988743 34455677
Q ss_pred CceeEEEe-c-------------CCCEEEEeeCCCeEEEEeccCCccccccccceeEEeccCCCccccc
Q 006939 75 SRLSDLNV-H-------------EGKLLGCSYNQSCVGVWVVDISRIEPYTIGSVTRVNGLSESKSSAS 129 (625)
Q Consensus 75 s~v~~l~~-~-------------dg~lL~sg~~Dg~V~vWdv~~~~~~~~~~~~i~~l~gHs~~v~~~~ 129 (625)
..+..+.+ + ++.+|++++.|+.|++||+..... .......+.+|...+....
T Consensus 148 ~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~---~~~~~~~~~~h~~~v~~~~ 213 (379)
T 3jrp_A 148 IGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQ---TYVLESTLEGHSDWVRDVA 213 (379)
T ss_dssp TCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTT---EEEEEEEECCCSSCEEEEE
T ss_pred CceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCc---ceeeEEEEecccCcEeEEE
Confidence 78888888 4 589999999999999999872211 1123456667776665443
No 84
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.25 E-value=2.3e-11 Score=129.21 Aligned_cols=117 Identities=16% Similarity=0.218 Sum_probs=95.8
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCeEEEEeC-CCCCCeEEEEEcC----CCCEEEEEeCC-cEEEEeCCCCeeEEEEecc-
Q 006939 1 MSGYFHFSGSADRTVKFWDLETFELIGSAG-PETSGVRCLTFNP----DGRTLLCGLHE-SLKVFSWEPIRCHDAVDVG- 73 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~tg~~i~tl~-~h~~~V~sv~fsP----dg~~LvSgs~D-sIrVWdl~sg~~i~t~~~~- 73 (625)
|++.+|++|+.|++|++||+++++++..+. +|...|.+++|+| ++.+|++|+.| .|++||+++++++..+..+
T Consensus 224 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 303 (437)
T 3gre_A 224 EECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSD 303 (437)
T ss_dssp TTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSS
T ss_pred CCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCC
Confidence 689999999999999999999999999886 7888999996654 67799999999 8999999999988776532
Q ss_pred -------------------------CCceeEEEecCCCEEEEeeCCCeEEEEeccCCccccccccceeEEeccCCC
Q 006939 74 -------------------------WSRLSDLNVHEGKLLGCSYNQSCVGVWVVDISRIEPYTIGSVTRVNGLSES 124 (625)
Q Consensus 74 -------------------------~s~v~~l~~~dg~lL~sg~~Dg~V~vWdv~~~~~~~~~~~~i~~l~gHs~~ 124 (625)
...+..+.+.++.+|++|+.|+.|++||+. .+..+..+.+|...
T Consensus 304 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~i~~wd~~-------~~~~~~~~~~~~~~ 372 (437)
T 3gre_A 304 EQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVSNDKILLTDEATSSIVMFSLN-------ELSSSKAVISPSRF 372 (437)
T ss_dssp SCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEETTEEEEEEGGGTEEEEEETT-------CGGGCEEEECC--C
T ss_pred CCCccceecccccccccceecccccCCceEEEEECCceEEEecCCCCeEEEEECC-------CcccceEEeccccc
Confidence 233566677777899999999999999998 45556666666443
No 85
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.25 E-value=2e-11 Score=129.67 Aligned_cols=102 Identities=18% Similarity=0.206 Sum_probs=83.9
Q ss_pred CCCEEEEEeCCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCC-EEEEEeCC-cEEEEeCCCCeeEEEE---------
Q 006939 2 SGYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGR-TLLCGLHE-SLKVFSWEPIRCHDAV--------- 70 (625)
Q Consensus 2 dG~lLASGS~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~-~LvSgs~D-sIrVWdl~sg~~i~t~--------- 70 (625)
||++|||||.|++|+|||+.++.++..+.+|...|.+++|+|++. +|++|+.| +|++||+.+++.....
T Consensus 155 d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~ 234 (393)
T 4gq1_A 155 AEQVIASVGDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNP 234 (393)
T ss_dssp EEEEEEEEETTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCC
T ss_pred CCCEEEEEECCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccc
Confidence 688999999999999999999998888888999999999999874 78899999 9999999876543211
Q ss_pred ----------------eccCCceeEEEe--cCCCEEEEeeCCCeEEEEecc
Q 006939 71 ----------------DVGWSRLSDLNV--HEGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 71 ----------------~~~~s~v~~l~~--~dg~lL~sg~~Dg~V~vWdv~ 103 (625)
..+...+..+.+ ++++.|++++.|+.+++||+.
T Consensus 235 ~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~ 285 (393)
T 4gq1_A 235 WLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLF 285 (393)
T ss_dssp CSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-
T ss_pred eEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECc
Confidence 234445566665 689999999999999999987
No 86
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.25 E-value=5.3e-11 Score=125.58 Aligned_cols=103 Identities=14% Similarity=0.189 Sum_probs=91.8
Q ss_pred CCC-CEEEEEeCCCeEEEEECCCCeEEEEe--CCCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCeeEEEE-eccCC
Q 006939 1 MSG-YFHFSGSADRTVKFWDLETFELIGSA--GPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAV-DVGWS 75 (625)
Q Consensus 1 PdG-~lLASGS~D~tVkIWDL~tg~~i~tl--~~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~i~t~-~~~~s 75 (625)
|+| .+|++|+.|++|++||+.+++++..+ .+|...|.+++|+|++.+|++|+.| .|++||++.++++..+ ..+..
T Consensus 141 p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~ 220 (402)
T 2aq5_A 141 PTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEG 220 (402)
T ss_dssp SSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCS
T ss_pred cCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCC
Confidence 566 69999999999999999999999999 8899999999999999999999998 9999999999998877 45544
Q ss_pred c-eeEEEe-cCCCEEEEe---eCCCeEEEEecc
Q 006939 76 R-LSDLNV-HEGKLLGCS---YNQSCVGVWVVD 103 (625)
Q Consensus 76 ~-v~~l~~-~dg~lL~sg---~~Dg~V~vWdv~ 103 (625)
. +..+.+ +++.+|++| +.|+.|++||+.
T Consensus 221 ~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~ 253 (402)
T 2aq5_A 221 TRPVHAVFVSEGKILTTGFSRMSERQVALWDTK 253 (402)
T ss_dssp SSCCEEEECSTTEEEEEEECTTCCEEEEEEETT
T ss_pred CcceEEEEcCCCcEEEEeccCCCCceEEEEcCc
Confidence 3 666777 788999998 689999999987
No 87
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.25 E-value=6.5e-11 Score=126.62 Aligned_cols=124 Identities=17% Similarity=0.290 Sum_probs=104.4
Q ss_pred CCCEEEEEeCCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCeeEEEEeccCCceeEE
Q 006939 2 SGYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVDVGWSRLSDL 80 (625)
Q Consensus 2 dG~lLASGS~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~i~t~~~~~s~v~~l 80 (625)
++.+|++|+.|++|++||+.+++++..+.+|...|.++.| ++.++++|+.| .|++||++++.++..+..+...+..+
T Consensus 265 ~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~ 342 (435)
T 1p22_A 265 DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCI 342 (435)
T ss_dssp ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEE
T ss_pred CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEE
Confidence 5789999999999999999999999999999999999999 57899999998 99999999999999998888889998
Q ss_pred EecCCCEEEEeeCCCeEEEEeccCCc--cccccccceeEEeccCCCcccc
Q 006939 81 NVHEGKLLGCSYNQSCVGVWVVDISR--IEPYTIGSVTRVNGLSESKSSA 128 (625)
Q Consensus 81 ~~~dg~lL~sg~~Dg~V~vWdv~~~~--~~~~~~~~i~~l~gHs~~v~~~ 128 (625)
.+ ++.+|++|+.||.|++||+.... ..+.....+..+.+|...+...
T Consensus 343 ~~-~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l 391 (435)
T 1p22_A 343 RF-DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRL 391 (435)
T ss_dssp EC-CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCE
T ss_pred Ee-cCCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEE
Confidence 87 88999999999999999987211 1111122566777787766544
No 88
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.25 E-value=2.4e-11 Score=130.38 Aligned_cols=102 Identities=13% Similarity=0.127 Sum_probs=88.5
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCC-EEEEEeCC-cEEEEeCCCCeeEEEE---eccCC
Q 006939 1 MSGYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGR-TLLCGLHE-SLKVFSWEPIRCHDAV---DVGWS 75 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~-~LvSgs~D-sIrVWdl~sg~~i~t~---~~~~s 75 (625)
|+|.+|++|+.|++|++||++ ++.+..+.+|...|.+++|+|++. +|++|+.| +|+|||++.++....+ ..|..
T Consensus 219 ~~~~~l~~g~~dg~i~~wd~~-~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~ 297 (435)
T 4e54_B 219 ASSRMVVTGDNVGNVILLNMD-GKELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRH 297 (435)
T ss_dssp TTTTEEEEECSSSBEEEEESS-SCBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSS
T ss_pred CCCCEEEEEeCCCcEeeeccC-cceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccc
Confidence 689999999999999999996 566788899999999999999986 67789988 9999999887654332 34667
Q ss_pred ceeEEEe-cCCCEEEEeeCCCeEEEEecc
Q 006939 76 RLSDLNV-HEGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 76 ~v~~l~~-~dg~lL~sg~~Dg~V~vWdv~ 103 (625)
.|..+.| +++.+|++++.|+.|++||+.
T Consensus 298 ~v~~~~~spdg~~l~s~~~D~~i~iwd~~ 326 (435)
T 4e54_B 298 PVNAACFSPDGARLLTTDQKSEIRVYSAS 326 (435)
T ss_dssp CEEECCBCTTSSEEEEEESSSCEEEEESS
T ss_pred cccceeECCCCCeeEEEcCCCEEEEEECC
Confidence 7888888 799999999999999999987
No 89
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.25 E-value=1.6e-10 Score=117.75 Aligned_cols=121 Identities=12% Similarity=0.159 Sum_probs=104.4
Q ss_pred CCCCEEEEEeCCCeEEEEECCC-CeEEEEeCCCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCeeEEEEeccCCcee
Q 006939 1 MSGYFHFSGSADRTVKFWDLET-FELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVDVGWSRLS 78 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~t-g~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~i~t~~~~~s~v~ 78 (625)
|+|.+|++|+.|+.|++||+.+ ++.+..+..|...|.+++|+|++.+|++++.| .|++||+.++++...+. +...+.
T Consensus 185 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~~~ 263 (369)
T 3zwl_B 185 TKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYE-TDCPLN 263 (369)
T ss_dssp GGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE-CSSCEE
T ss_pred CCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeec-CCCCce
Confidence 5788999999999999999999 78899999999999999999999999999998 99999999999888776 445577
Q ss_pred EEEe-cCCCEEEEeeCCC--------------eEEEEeccCCccccccccceeEEeccCCCccccc
Q 006939 79 DLNV-HEGKLLGCSYNQS--------------CVGVWVVDISRIEPYTIGSVTRVNGLSESKSSAS 129 (625)
Q Consensus 79 ~l~~-~dg~lL~sg~~Dg--------------~V~vWdv~~~~~~~~~~~~i~~l~gHs~~v~~~~ 129 (625)
.+.+ +++.++++++.++ .+++||.. .+..+..+.+|...+....
T Consensus 264 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~-------~~~~~~~~~~~~~~v~~~~ 322 (369)
T 3zwl_B 264 TAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKI-------FEEEIGRVQGHFGPLNTVA 322 (369)
T ss_dssp EEEECSSSSEEEEEECCC-------------CEEEEEETT-------TCCEEEEEECCSSCEEEEE
T ss_pred eEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecC-------CCcchhheecccCcEEEEE
Confidence 7777 7999999999888 79999887 4556677788877766544
No 90
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.24 E-value=2.3e-11 Score=135.84 Aligned_cols=120 Identities=11% Similarity=-0.056 Sum_probs=97.4
Q ss_pred CEEEEEeCCCeEEEEECCCCe-EEEEeCCCCCCeEEE--EEcCCC-CEEEEEeCC-cEEEEeCCCCeeEEEEeccC--Cc
Q 006939 4 YFHFSGSADRTVKFWDLETFE-LIGSAGPETSGVRCL--TFNPDG-RTLLCGLHE-SLKVFSWEPIRCHDAVDVGW--SR 76 (625)
Q Consensus 4 ~lLASGS~D~tVkIWDL~tg~-~i~tl~~h~~~V~sv--~fsPdg-~~LvSgs~D-sIrVWdl~sg~~i~t~~~~~--s~ 76 (625)
..|++|+.|++|++||++++. ....+.+|...|.+| .|+|+| .+|+||+.| +|+|||++.+++..++..+. ..
T Consensus 278 ~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~ 357 (524)
T 2j04_B 278 TTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSN 357 (524)
T ss_dssp SEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCS
T ss_pred CeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCc
Confidence 479999999999999999774 345688999999999 578888 899999999 99999999888766654443 23
Q ss_pred eeEEEe-cCCCEEEEeeCCCeEEEEeccCCccccccccceeEEeccCCCcccccc
Q 006939 77 LSDLNV-HEGKLLGCSYNQSCVGVWVVDISRIEPYTIGSVTRVNGLSESKSSASG 130 (625)
Q Consensus 77 v~~l~~-~dg~lL~sg~~Dg~V~vWdv~~~~~~~~~~~~i~~l~gHs~~v~~~~~ 130 (625)
+..+.| ++++.+++++.|+.|++||++ .+..+..+.+|...+.....
T Consensus 358 v~~v~fsp~~~~l~s~~~d~tv~lwd~~-------~~~~~~~l~gH~~~V~sva~ 405 (524)
T 2j04_B 358 LVPVVYCPQIYSYIYSDGASSLRAVPSR-------AAFAVHPLVSRETTITAIGV 405 (524)
T ss_dssp CCCEEEETTTTEEEEECSSSEEEEEETT-------CTTCCEEEEECSSCEEEEEC
T ss_pred ccceEeCCCcCeEEEeCCCCcEEEEECc-------ccccceeeecCCCceEEEEe
Confidence 566777 789999999999999999987 34455677889888766543
No 91
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.23 E-value=1e-10 Score=119.11 Aligned_cols=66 Identities=23% Similarity=0.401 Sum_probs=59.0
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCeEEEEeCCCCCCeEEEEE--cCCCCEEEEEeCC-cEEEEeCCCCeeE
Q 006939 1 MSGYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTF--NPDGRTLLCGLHE-SLKVFSWEPIRCH 67 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~f--sPdg~~LvSgs~D-sIrVWdl~sg~~i 67 (625)
|+|.+|++|+.|++|++||+.+++++. +.+|...|.+++| +|++.+|++|+.| .|++||+++++++
T Consensus 96 ~~~~~l~s~~~dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~ 164 (368)
T 3mmy_A 96 DDGSKVFTASCDKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPM 164 (368)
T ss_dssp TTSSEEEEEETTSEEEEEETTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCS
T ss_pred cCCCEEEEEcCCCcEEEEEcCCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEE
Confidence 689999999999999999999998776 5568999999999 8999999999998 9999999876543
No 92
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.23 E-value=8.2e-11 Score=124.45 Aligned_cols=114 Identities=15% Similarity=0.223 Sum_probs=92.7
Q ss_pred CCCCEEEEEeCCCeEEEEECCC-CeEEE-------EeCCCCCCeEEEEEcCCC-CEEEEEeCC-cEEEEeCCCCee----
Q 006939 1 MSGYFHFSGSADRTVKFWDLET-FELIG-------SAGPETSGVRCLTFNPDG-RTLLCGLHE-SLKVFSWEPIRC---- 66 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~t-g~~i~-------tl~~h~~~V~sv~fsPdg-~~LvSgs~D-sIrVWdl~sg~~---- 66 (625)
|+|.+|++| .|++|++||+.+ ++++. .+.+|...|.+++|+|++ .+|++|+.| .|++||++.+.+
T Consensus 187 ~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 265 (447)
T 3dw8_B 187 SDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRH 265 (447)
T ss_dssp TTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTT
T ss_pred CCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccce
Confidence 689999999 799999999994 44554 367899999999999998 999999999 999999998886
Q ss_pred EEEEeccCC------------ceeEEEe-cCCCEEEEeeCCCeEEEEeccCCccccccccceeEEeccC
Q 006939 67 HDAVDVGWS------------RLSDLNV-HEGKLLGCSYNQSCVGVWVVDISRIEPYTIGSVTRVNGLS 122 (625)
Q Consensus 67 i~t~~~~~s------------~v~~l~~-~dg~lL~sg~~Dg~V~vWdv~~~~~~~~~~~~i~~l~gHs 122 (625)
...+..+.. .+..+.| +++++|++++. +.|++||+.. .+..+..+.+|.
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~------~~~~~~~~~~~~ 327 (447)
T 3dw8_B 266 SKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNM------ENRPVETYQVHE 327 (447)
T ss_dssp CEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTC------CSSCSCCEESCG
T ss_pred eeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCC------Cccccceeeccc
Confidence 566666654 7888988 79999999999 9999999972 134455556663
No 93
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.22 E-value=3.1e-11 Score=124.02 Aligned_cols=101 Identities=14% Similarity=0.144 Sum_probs=85.6
Q ss_pred CCEEEEEeCCCeEEEEECCCC---eEEEEeCCCCCCeEEEEEcCCC----CEEEEEeCC-cEEEEeCCCC---e-eEEEE
Q 006939 3 GYFHFSGSADRTVKFWDLETF---ELIGSAGPETSGVRCLTFNPDG----RTLLCGLHE-SLKVFSWEPI---R-CHDAV 70 (625)
Q Consensus 3 G~lLASGS~D~tVkIWDL~tg---~~i~tl~~h~~~V~sv~fsPdg----~~LvSgs~D-sIrVWdl~sg---~-~i~t~ 70 (625)
+.+|++|+.|++|+|||++.. +++..+.+|...|.+++|+|++ .+|++|+.| +|+||++... . ....+
T Consensus 179 ~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~ 258 (316)
T 3bg1_A 179 IKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLL 258 (316)
T ss_dssp CCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEE
T ss_pred cceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhh
Confidence 578999999999999999765 5678899999999999999987 789999999 9999998762 1 12233
Q ss_pred eccCCceeEEEe-cCCCEEEEeeCCCeEEEEecc
Q 006939 71 DVGWSRLSDLNV-HEGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 71 ~~~~s~v~~l~~-~dg~lL~sg~~Dg~V~vWdv~ 103 (625)
..+...+..+.| +++.+|++++.|+.|++|+..
T Consensus 259 ~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 259 HKFNDVVWHVSWSITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp EECSSCEEEEEECTTTCCEEEEESSSCEEEEEEC
T ss_pred hcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEEC
Confidence 445677888888 799999999999999999976
No 94
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.21 E-value=8.8e-11 Score=123.02 Aligned_cols=103 Identities=17% Similarity=0.167 Sum_probs=84.4
Q ss_pred CCCCEEEEEeCCCe-EEEEECCCCeEEEEeC-C-CCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCeeEEE-------
Q 006939 1 MSGYFHFSGSADRT-VKFWDLETFELIGSAG-P-ETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDA------- 69 (625)
Q Consensus 1 PdG~lLASGS~D~t-VkIWDL~tg~~i~tl~-~-h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~i~t------- 69 (625)
|||.+||+|+.|++ |+|||+.+++++..+. + |...|.+++|+|+|.+|++|+.| +|+|||++.+.....
T Consensus 205 ~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~ 284 (355)
T 3vu4_A 205 RKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWI 284 (355)
T ss_dssp TTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTE
T ss_pred CCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCccccccccee
Confidence 78999999999999 9999999999999997 5 99999999999999999999999 999999975432110
Q ss_pred ----EeccC------------CceeEEEe-cCCCEEEEeeCCCeEEEEecc
Q 006939 70 ----VDVGW------------SRLSDLNV-HEGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 70 ----~~~~~------------s~v~~l~~-~dg~lL~sg~~Dg~V~vWdv~ 103 (625)
+...| .....+.+ +++++|++++.||.+++|++.
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~ 335 (355)
T 3vu4_A 285 NMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFKVV 335 (355)
T ss_dssp ECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEEE
T ss_pred eccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEE
Confidence 01111 11134556 788999999999999999987
No 95
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.21 E-value=1.9e-10 Score=119.67 Aligned_cols=102 Identities=13% Similarity=0.254 Sum_probs=86.5
Q ss_pred CCCC-EEEEEeCCCeEEEEEC----CCCe------EEEEeCC----------CCCCeEEEEEcCCCCEEEEEeCC-cEEE
Q 006939 1 MSGY-FHFSGSADRTVKFWDL----ETFE------LIGSAGP----------ETSGVRCLTFNPDGRTLLCGLHE-SLKV 58 (625)
Q Consensus 1 PdG~-lLASGS~D~tVkIWDL----~tg~------~i~tl~~----------h~~~V~sv~fsPdg~~LvSgs~D-sIrV 58 (625)
|+|. +||+|+.|++|++||+ .+++ ....+.. |...|.+++|+|++.+|++|+.| .|++
T Consensus 55 ~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i 134 (425)
T 1r5m_A 55 PLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNSIVTGVENGELRL 134 (425)
T ss_dssp SSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred CCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCEEEEEeCCCeEEE
Confidence 6888 9999999999999999 8888 4444443 67799999999999999999998 9999
Q ss_pred EeCCCCeeEEEEeccCCceeEEEe-cCCCEEEEeeCCCeEEEEecc
Q 006939 59 FSWEPIRCHDAVDVGWSRLSDLNV-HEGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 59 Wdl~sg~~i~t~~~~~s~v~~l~~-~dg~lL~sg~~Dg~V~vWdv~ 103 (625)
|| ..+.++..+..+...+..+.+ +++.+|++++.|+.|++||+.
T Consensus 135 ~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~ 179 (425)
T 1r5m_A 135 WN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVI 179 (425)
T ss_dssp EE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETT
T ss_pred Ee-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECC
Confidence 99 667788888888888999998 799999999999999999997
No 96
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.21 E-value=1.1e-10 Score=121.88 Aligned_cols=122 Identities=11% Similarity=0.153 Sum_probs=103.1
Q ss_pred CC-CCEEEEEeCCCeEEEEECCCCeEEEEeCCC------CCCeEEEEEcCCC-CEEEEEeCC----cEEEEeCCCC-eeE
Q 006939 1 MS-GYFHFSGSADRTVKFWDLETFELIGSAGPE------TSGVRCLTFNPDG-RTLLCGLHE----SLKVFSWEPI-RCH 67 (625)
Q Consensus 1 Pd-G~lLASGS~D~tVkIWDL~tg~~i~tl~~h------~~~V~sv~fsPdg-~~LvSgs~D----sIrVWdl~sg-~~i 67 (625)
|+ +.+|++|+.|++|++||+++++++..+..| ...|.+++|+|++ .++++++.| .|++||++.+ .+.
T Consensus 175 ~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~ 254 (416)
T 2pm9_A 175 QSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPL 254 (416)
T ss_dssp SSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCS
T ss_pred CCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCc
Confidence 45 789999999999999999999999988877 7889999999997 688888876 8999999986 566
Q ss_pred EEEe-ccCCceeEEEe-c-CCCEEEEeeCCCeEEEEeccCCccccccccceeEEeccCCCccccc
Q 006939 68 DAVD-VGWSRLSDLNV-H-EGKLLGCSYNQSCVGVWVVDISRIEPYTIGSVTRVNGLSESKSSAS 129 (625)
Q Consensus 68 ~t~~-~~~s~v~~l~~-~-dg~lL~sg~~Dg~V~vWdv~~~~~~~~~~~~i~~l~gHs~~v~~~~ 129 (625)
..+. .+...+..+.+ + ++.+|++++.|+.|++||+. .+..+..+.+|...+....
T Consensus 255 ~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~-------~~~~~~~~~~~~~~v~~~~ 312 (416)
T 2pm9_A 255 QTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPE-------SAEQLSQFPARGNWCFKTK 312 (416)
T ss_dssp BCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSS-------SCCEEEEEECSSSCCCCEE
T ss_pred EEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCC-------CCccceeecCCCCceEEEE
Confidence 6666 67788999998 5 89999999999999999987 4556777788877665443
No 97
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.20 E-value=8.8e-11 Score=124.23 Aligned_cols=102 Identities=9% Similarity=0.203 Sum_probs=86.0
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCe-----------EEEEeCCCC------------CCeEEEEEcCCC--CEEEEEeCC-
Q 006939 1 MSGYFHFSGSADRTVKFWDLETFE-----------LIGSAGPET------------SGVRCLTFNPDG--RTLLCGLHE- 54 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~tg~-----------~i~tl~~h~------------~~V~sv~fsPdg--~~LvSgs~D- 54 (625)
|+|.+||+|+.|++|+|||+.+++ ++..+.+|. ..|.+++|+|++ ..|++++.|
T Consensus 38 ~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~s~d~ 117 (447)
T 3dw8_B 38 HSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDK 117 (447)
T ss_dssp SSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEEECSS
T ss_pred CCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCCcceEEEeCCCC
Confidence 689999999999999999999877 578899998 889999999998 789999998
Q ss_pred cEEEEeCCCCeeE---------------------------------------EE-EeccCCceeEEEe-cCCCEEEEeeC
Q 006939 55 SLKVFSWEPIRCH---------------------------------------DA-VDVGWSRLSDLNV-HEGKLLGCSYN 93 (625)
Q Consensus 55 sIrVWdl~sg~~i---------------------------------------~t-~~~~~s~v~~l~~-~dg~lL~sg~~ 93 (625)
+|++||+..+... .. ...|...+..+.+ +++.+|++| .
T Consensus 118 ~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~ 196 (447)
T 3dw8_B 118 TIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSDYETYLSA-D 196 (447)
T ss_dssp CEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTSSEEEEE-C
T ss_pred eEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcCCCCEEEEe-C
Confidence 9999998764431 12 2356777888988 789999998 7
Q ss_pred CCeEEEEecc
Q 006939 94 QSCVGVWVVD 103 (625)
Q Consensus 94 Dg~V~vWdv~ 103 (625)
|+.|++||++
T Consensus 197 d~~i~iwd~~ 206 (447)
T 3dw8_B 197 DLRINLWHLE 206 (447)
T ss_dssp SSEEEEEETT
T ss_pred CCeEEEEECC
Confidence 9999999987
No 98
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.19 E-value=1.6e-10 Score=127.09 Aligned_cols=121 Identities=10% Similarity=0.161 Sum_probs=104.3
Q ss_pred CCEEEEEeC-CCeEEEEECCCCeEE-EEeCCCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCeeEEEEec-cCCcee
Q 006939 3 GYFHFSGSA-DRTVKFWDLETFELI-GSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVDV-GWSRLS 78 (625)
Q Consensus 3 G~lLASGS~-D~tVkIWDL~tg~~i-~tl~~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~i~t~~~-~~s~v~ 78 (625)
+.+|++|+. |+.|++||+.+++.. ..+.+|...|.+++|+|+|.+|++|+.| .|++||+.+++++..+.. +...+.
T Consensus 456 ~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~ 535 (615)
T 1pgu_A 456 QNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKIN 535 (615)
T ss_dssp SSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEE
T ss_pred CCEEEEeecCCCeEEEEECCCccccccccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcceeEeecCCCCcee
Confidence 678999999 999999999988776 7788899999999999999999999998 999999999999888776 888899
Q ss_pred EEEe-c----------CCCEEEEeeCCCeEEEEeccCCccccccccceeEEeccCCCccccc
Q 006939 79 DLNV-H----------EGKLLGCSYNQSCVGVWVVDISRIEPYTIGSVTRVNGLSESKSSAS 129 (625)
Q Consensus 79 ~l~~-~----------dg~lL~sg~~Dg~V~vWdv~~~~~~~~~~~~i~~l~gHs~~v~~~~ 129 (625)
.+.| + ++.+|++++.|+.|++||+... ...+..+.+|...+....
T Consensus 536 ~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~------~~~~~~~~~h~~~v~~l~ 591 (615)
T 1pgu_A 536 AISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRP------MKIIKALNAHKDGVNNLL 591 (615)
T ss_dssp EEEECCCC------CCSCCEEEEEETTSCEEEEESSCT------TCCEEETTSSTTCEEEEE
T ss_pred EEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCC------ceechhhhcCccceEEEE
Confidence 9998 7 8999999999999999999721 145566677776665543
No 99
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.19 E-value=1.3e-10 Score=137.57 Aligned_cols=117 Identities=7% Similarity=-0.042 Sum_probs=95.2
Q ss_pred CCCCEEEEEeCCCeEEEEECCCC---------------------------------------------eEEEEeCCCCCC
Q 006939 1 MSGYFHFSGSADRTVKFWDLETF---------------------------------------------ELIGSAGPETSG 35 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~tg---------------------------------------------~~i~tl~~h~~~ 35 (625)
|||++||+|+.|++|+|||+.++ +++..+.+|.+.
T Consensus 498 pdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~ 577 (902)
T 2oaj_A 498 AETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGK 577 (902)
T ss_dssp TTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCS
T ss_pred CCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCc
Confidence 79999999999999999999765 357788999999
Q ss_pred eEEEEEcCCCCEEEEEeCC-cEEEEeCCCCeeEEE-----Ee-ccCCceeEEEec------C---CCEEEEeeCCCeEEE
Q 006939 36 VRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDA-----VD-VGWSRLSDLNVH------E---GKLLGCSYNQSCVGV 99 (625)
Q Consensus 36 V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~i~t-----~~-~~~s~v~~l~~~------d---g~lL~sg~~Dg~V~v 99 (625)
|.+++|+||| +|++|+.| +|+|||++....+.. +. .|...|.++.|. | +++|++|+.|++|++
T Consensus 578 V~svafSpdG-~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~ 656 (902)
T 2oaj_A 578 TSAINNSNIG-FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVIT 656 (902)
T ss_dssp EEEEEECBTS-EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEE
T ss_pred EEEEEecCCc-EEEEEeCCCcEEEEECCCCeEEEEeehhHhccccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEE
Confidence 9999999999 99999999 999999988776532 22 456668888874 4 379999999999999
Q ss_pred EeccCCccccccccceeEEeccC
Q 006939 100 WVVDISRIEPYTIGSVTRVNGLS 122 (625)
Q Consensus 100 Wdv~~~~~~~~~~~~i~~l~gHs 122 (625)
||+... -.+.....+.+|.
T Consensus 657 wd~~p~----~~g~~~~~~~~~~ 675 (902)
T 2oaj_A 657 YKILPA----SGGKFDVQLMDIT 675 (902)
T ss_dssp EEEEEC----GGGCEEEEEEEEE
T ss_pred EEEecC----CCCcEEEEecCce
Confidence 998311 1345566777775
No 100
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.18 E-value=3.9e-10 Score=112.63 Aligned_cols=117 Identities=17% Similarity=0.174 Sum_probs=98.7
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCeEEEEeCC-CCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCeeEEEEeccCCcee
Q 006939 1 MSGYFHFSGSADRTVKFWDLETFELIGSAGP-ETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVDVGWSRLS 78 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~tg~~i~tl~~-h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~i~t~~~~~s~v~ 78 (625)
+++.+|++|+.|+.|++|| .++.+..+.. |...|.+++|+|++. +++|+.| .|++||+++++++..+..+...+.
T Consensus 153 ~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~ 229 (313)
T 3odt_A 153 FSENKFLTASADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFVY 229 (313)
T ss_dssp TTTTEEEEEETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSCEE
T ss_pred CCCCEEEEEECCCCEEEEe--cCceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCceEE
Confidence 3789999999999999999 5677777777 889999999999998 7888888 999999999999998988888999
Q ss_pred EEEe-cCCCEEEEeeCCCeEEEEeccCCccccccccceeEEeccCCCcccc
Q 006939 79 DLNV-HEGKLLGCSYNQSCVGVWVVDISRIEPYTIGSVTRVNGLSESKSSA 128 (625)
Q Consensus 79 ~l~~-~dg~lL~sg~~Dg~V~vWdv~~~~~~~~~~~~i~~l~gHs~~v~~~ 128 (625)
.+.+ +++ .|++++.|+.|++||+. .+.....+.+|...+...
T Consensus 230 ~~~~~~~~-~l~~~~~dg~v~iwd~~-------~~~~~~~~~~~~~~i~~~ 272 (313)
T 3odt_A 230 CIKLLPNG-DIVSCGEDRTVRIWSKE-------NGSLKQVITLPAISIWSV 272 (313)
T ss_dssp EEEECTTS-CEEEEETTSEEEEECTT-------TCCEEEEEECSSSCEEEE
T ss_pred EEEEecCC-CEEEEecCCEEEEEECC-------CCceeEEEeccCceEEEE
Confidence 9998 566 58899999999999987 345566666776555443
No 101
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.18 E-value=1.3e-10 Score=130.57 Aligned_cols=118 Identities=12% Similarity=0.102 Sum_probs=93.3
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCe-------EEEEe----CCCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCee--
Q 006939 1 MSGYFHFSGSADRTVKFWDLETFE-------LIGSA----GPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRC-- 66 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~tg~-------~i~tl----~~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~-- 66 (625)
|||++||+|+.|++|+|||+.++. .+.++ .+|...|.+++|+||| +++++.| ++++|++..+.+
T Consensus 139 PDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~ 216 (588)
T 2j04_A 139 PIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQP 216 (588)
T ss_dssp SSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCC
T ss_pred CCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCcccc
Confidence 899999999999999999999885 36676 7788899999999999 6677777 999999988774
Q ss_pred -EEEE-eccCCceeEEEecCCCEEEEeeCCCeEEEEeccCCccccccccceeEEeccCCCccccc
Q 006939 67 -HDAV-DVGWSRLSDLNVHEGKLLGCSYNQSCVGVWVVDISRIEPYTIGSVTRVNGLSESKSSAS 129 (625)
Q Consensus 67 -i~t~-~~~~s~v~~l~~~dg~lL~sg~~Dg~V~vWdv~~~~~~~~~~~~i~~l~gHs~~v~~~~ 129 (625)
..++ ..+...|.++.|. ++.|++++ ++.|++||+. .+.......||...+....
T Consensus 217 ~~~tL~~~h~~~V~svaFs-g~~LASa~-~~tIkLWd~~-------~~~~~~~~~gh~~~V~~va 272 (588)
T 2j04_A 217 VSRMIQNASRRKITDLKIV-DYKVVLTC-PGYVHKIDLK-------NYSISSLKTGSLENFHIIP 272 (588)
T ss_dssp CEEEEECCCSSCCCCEEEE-TTEEEEEC-SSEEEEEETT-------TTEEEEEECSCCSCCCEEE
T ss_pred ceeeecccccCcEEEEEEE-CCEEEEEe-CCeEEEEECC-------CCeEEEEEcCCCceEEEEE
Confidence 2445 3566788999988 78888887 5899999987 2222233337887776543
No 102
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.18 E-value=1e-10 Score=125.81 Aligned_cols=122 Identities=11% Similarity=0.065 Sum_probs=100.2
Q ss_pred CCCCEE-EEEeCCCeEEEEECC--CCeEEEEeC--CCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCeeEE----EE
Q 006939 1 MSGYFH-FSGSADRTVKFWDLE--TFELIGSAG--PETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHD----AV 70 (625)
Q Consensus 1 PdG~lL-ASGS~D~tVkIWDL~--tg~~i~tl~--~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~i~----t~ 70 (625)
|+|.+| ++|+.|++|++||+. +++++..+. .|...|.+++|+|++.+|++|+.+ .+++|++..+.... .+
T Consensus 112 ~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~ 191 (450)
T 2vdu_B 112 SDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPI 191 (450)
T ss_dssp TTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCS
T ss_pred CCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecCCcccccccceee
Confidence 688886 999999999999999 888888876 567889999999999999999998 99999998776543 56
Q ss_pred eccCCceeEEEe-cC---CCEEEEeeCCCeEEEEeccCCccccccccceeE-EeccCCCccccc
Q 006939 71 DVGWSRLSDLNV-HE---GKLLGCSYNQSCVGVWVVDISRIEPYTIGSVTR-VNGLSESKSSAS 129 (625)
Q Consensus 71 ~~~~s~v~~l~~-~d---g~lL~sg~~Dg~V~vWdv~~~~~~~~~~~~i~~-l~gHs~~v~~~~ 129 (625)
..+...+.++.| ++ +++|++++.|+.|++||+. .+..+.. +.+|...+....
T Consensus 192 ~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~-------~~~~~~~~~~~h~~~v~~~~ 248 (450)
T 2vdu_B 192 LGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYP-------QCFIVDKWLFGHKHFVSSIC 248 (450)
T ss_dssp EECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEES-------CTTCEEEECCCCSSCEEEEE
T ss_pred ecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECC-------CCceeeeeecCCCCceEEEE
Confidence 667788999988 67 8899999999999999987 2333433 456766655443
No 103
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.18 E-value=1.3e-10 Score=123.32 Aligned_cols=95 Identities=7% Similarity=-0.082 Sum_probs=74.9
Q ss_pred EEEEeCCCeEEEEECCCCeEEEEe-----CCCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCeeEEEEeccCCcee-
Q 006939 6 HFSGSADRTVKFWDLETFELIGSA-----GPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVDVGWSRLS- 78 (625)
Q Consensus 6 LASGS~D~tVkIWDL~tg~~i~tl-----~~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~i~t~~~~~s~v~- 78 (625)
+++|+.|++|++||..+++++..+ .+|...+.+..+ ++.++++|+.| +|+|||+.+++++.++..|...+.
T Consensus 253 laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~--sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs 330 (356)
T 2w18_A 253 ESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDV--KDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWS 330 (356)
T ss_dssp -----CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEE--ETTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCC
T ss_pred eeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEcccc--CCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEE
Confidence 378999999999999999988765 477666554444 48899999999 999999999999999987655444
Q ss_pred EEEe-cCCCEEEEeeCCCeEEEEec
Q 006939 79 DLNV-HEGKLLGCSYNQSCVGVWVV 102 (625)
Q Consensus 79 ~l~~-~dg~lL~sg~~Dg~V~vWdv 102 (625)
.+.| ++|++|++|+.|++|+|||+
T Consensus 331 ~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 331 FVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp EEEECSSSSEEEEECTTSCEEEEEE
T ss_pred EEEECCCCCEEEEEECCCcEEEecC
Confidence 4667 89999999999999999986
No 104
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.18 E-value=2.5e-10 Score=121.73 Aligned_cols=100 Identities=15% Similarity=0.334 Sum_probs=88.6
Q ss_pred CCEEEE--EeCCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEe--CC-cEEEEeCCCCeeEEEEeccCCce
Q 006939 3 GYFHFS--GSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGL--HE-SLKVFSWEPIRCHDAVDVGWSRL 77 (625)
Q Consensus 3 G~lLAS--GS~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs--~D-sIrVWdl~sg~~i~t~~~~~s~v 77 (625)
+.++++ |+.|++|+|||+.+++++..+..| ..+.++.|+|++..+++++ .| .|+|||+.+++++..+.+|...|
T Consensus 289 ~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~-~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V 367 (420)
T 4gga_A 289 SNVLATGGGTSDRHIRIWNVCSGACLSAVDAH-SQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRV 367 (420)
T ss_dssp TTEEEEEECTTTCEEEEEETTTTEEEEEEECS-SCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCE
T ss_pred ccEEEEEeecCCCEEEEEeCCccccceeeccc-cceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCE
Confidence 456655 458999999999999999988766 6788999999999888764 56 89999999999999999999999
Q ss_pred eEEEe-cCCCEEEEeeCCCeEEEEecc
Q 006939 78 SDLNV-HEGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 78 ~~l~~-~dg~lL~sg~~Dg~V~vWdv~ 103 (625)
..+.| ++|.+|++|+.|++|++||+.
T Consensus 368 ~~l~~spdg~~l~S~s~D~tvriWdv~ 394 (420)
T 4gga_A 368 LSLTMSPDGATVASAAADETLRLWRCF 394 (420)
T ss_dssp EEEEECTTSSCEEEEETTTEEEEECCS
T ss_pred EEEEEcCCCCEEEEEecCCeEEEEECC
Confidence 99998 799999999999999999986
No 105
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.18 E-value=1.1e-10 Score=125.55 Aligned_cols=103 Identities=10% Similarity=-0.036 Sum_probs=92.8
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCeEEE----EeCCCCCCeEEEEEcCC---CCEEEEEeCC-cEEEEeCCCCeeEEE-Ee
Q 006939 1 MSGYFHFSGSADRTVKFWDLETFELIG----SAGPETSGVRCLTFNPD---GRTLLCGLHE-SLKVFSWEPIRCHDA-VD 71 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~tg~~i~----tl~~h~~~V~sv~fsPd---g~~LvSgs~D-sIrVWdl~sg~~i~t-~~ 71 (625)
|+|.+|++|+.|+.|++|++.+++... .+.+|...|.+++|+|+ +.+|++|+.| .|++||+.++.++.. +.
T Consensus 159 p~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~ 238 (450)
T 2vdu_B 159 EDDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLF 238 (450)
T ss_dssp TTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECC
T ss_pred CCCCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeec
Confidence 689999999999999999998877554 77889999999999999 9999999999 999999999988876 44
Q ss_pred ccCCceeEEEecCCCEEEEeeCCCeEEEEecc
Q 006939 72 VGWSRLSDLNVHEGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 72 ~~~s~v~~l~~~dg~lL~sg~~Dg~V~vWdv~ 103 (625)
.+...+..+.|.++.+|++++.|+.|++||+.
T Consensus 239 ~h~~~v~~~~~sd~~~l~s~~~d~~v~vwd~~ 270 (450)
T 2vdu_B 239 GHKHFVSSICCGKDYLLLSAGGDDKIFAWDWK 270 (450)
T ss_dssp CCSSCEEEEEECSTTEEEEEESSSEEEEEETT
T ss_pred CCCCceEEEEECCCCEEEEEeCCCeEEEEECC
Confidence 67788888888788999999999999999987
No 106
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.18 E-value=3e-10 Score=120.15 Aligned_cols=120 Identities=16% Similarity=0.198 Sum_probs=102.2
Q ss_pred CCEEEEEeCCCeEEEEECCCCeEEEEeCC-CCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCeeEEEEeccCCceeEE
Q 006939 3 GYFHFSGSADRTVKFWDLETFELIGSAGP-ETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVDVGWSRLSDL 80 (625)
Q Consensus 3 G~lLASGS~D~tVkIWDL~tg~~i~tl~~-h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~i~t~~~~~s~v~~l 80 (625)
+..+++++.|++|++||+.+++....+.. |...|.+++|+|++.+|++|+.| .|++||+.+++++..+..+...+..+
T Consensus 103 ~~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~ 182 (401)
T 4aez_A 103 NLNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCL 182 (401)
T ss_dssp TTSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEE
T ss_pred CCCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEE
Confidence 45678889999999999999998877765 78899999999999999999988 99999999999999888888889999
Q ss_pred EecCCCEEEEeeCCCeEEEEeccCCccccccccceeEEeccCCCccccc
Q 006939 81 NVHEGKLLGCSYNQSCVGVWVVDISRIEPYTIGSVTRVNGLSESKSSAS 129 (625)
Q Consensus 81 ~~~dg~lL~sg~~Dg~V~vWdv~~~~~~~~~~~~i~~l~gHs~~v~~~~ 129 (625)
.+ ++.+|++++.|+.|++||++.. ......+.+|...+....
T Consensus 183 ~~-~~~~l~~~~~dg~i~i~d~~~~------~~~~~~~~~~~~~v~~~~ 224 (401)
T 4aez_A 183 SW-NRHVLSSGSRSGAIHHHDVRIA------NHQIGTLQGHSSEVCGLA 224 (401)
T ss_dssp EE-ETTEEEEEETTSEEEEEETTSS------SCEEEEEECCSSCEEEEE
T ss_pred EE-CCCEEEEEcCCCCEEEEecccC------cceeeEEcCCCCCeeEEE
Confidence 88 6789999999999999998721 234566677777665543
No 107
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.18 E-value=1.5e-10 Score=129.88 Aligned_cols=98 Identities=12% Similarity=0.161 Sum_probs=83.8
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCeEEEEeCCCCC-----CeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCee-------E
Q 006939 1 MSGYFHFSGSADRTVKFWDLETFELIGSAGPETS-----GVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRC-------H 67 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~tg~~i~tl~~h~~-----~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~-------i 67 (625)
|||++||+++.|++|++||... ++..+. |.. .|.+++|+|||++|++|+.| +|++||+..+.. +
T Consensus 95 PdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l 171 (588)
T 2j04_A 95 PIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFE 171 (588)
T ss_dssp SSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEE
T ss_pred CCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceee
Confidence 7999999999999999999654 777777 665 59999999999999999999 999999998753 4
Q ss_pred EEE----eccCCceeEEEe-cCCCEEEEeeCCCeEEEEecc
Q 006939 68 DAV----DVGWSRLSDLNV-HEGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 68 ~t~----~~~~s~v~~l~~-~dg~lL~sg~~Dg~V~vWdv~ 103 (625)
.++ ..|...|..++| ++| +++++.|+.|++||+.
T Consensus 172 ~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~ 210 (588)
T 2j04_A 172 SSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVS 210 (588)
T ss_dssp EEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCC
T ss_pred eeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECC
Confidence 565 334568899998 666 8888899999999987
No 108
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.17 E-value=1.9e-10 Score=117.20 Aligned_cols=102 Identities=16% Similarity=0.207 Sum_probs=88.3
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcC---CCCEEEEEeCC-cEEEEeCCCCeeEEEEe-----
Q 006939 1 MSGYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNP---DGRTLLCGLHE-SLKVFSWEPIRCHDAVD----- 71 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsP---dg~~LvSgs~D-sIrVWdl~sg~~i~t~~----- 71 (625)
|++.+|++|+.|+.|++||+++++++.. ..|...|.+++|+| ++.++++|+.| .|++||++.+.+...+.
T Consensus 178 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~ 256 (357)
T 3i2n_A 178 QEERVVCAGYDNGDIKLFDLRNMALRWE-TNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEK 256 (357)
T ss_dssp -CCCEEEEEETTSEEEEEETTTTEEEEE-EECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEE
T ss_pred CCCCEEEEEccCCeEEEEECccCceeee-cCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccC
Confidence 5889999999999999999999987544 56788999999999 99999999988 99999998776654443
Q ss_pred ccCCceeEEEe-cCCC-EEEEeeCCCeEEEEecc
Q 006939 72 VGWSRLSDLNV-HEGK-LLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 72 ~~~s~v~~l~~-~dg~-lL~sg~~Dg~V~vWdv~ 103 (625)
.+...+..+.+ +++. +|++++.|+.|++||++
T Consensus 257 ~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~ 290 (357)
T 3i2n_A 257 AHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYE 290 (357)
T ss_dssp CCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEE
T ss_pred CCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecC
Confidence 67788889988 6777 89999999999999998
No 109
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.17 E-value=3.7e-10 Score=120.73 Aligned_cols=116 Identities=25% Similarity=0.371 Sum_probs=102.3
Q ss_pred CCEEEEEeCCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCeeEEEEeccCCceeEEE
Q 006939 3 GYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVDVGWSRLSDLN 81 (625)
Q Consensus 3 G~lLASGS~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~i~t~~~~~s~v~~l~ 81 (625)
+.+|++|+.|++|++||+.+++++..+.+|...|.++.|+ +..+++|+.| .|++||+.+++++..+..+...+..+.
T Consensus 169 ~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~ 246 (445)
T 2ovr_B 169 DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQ 246 (445)
T ss_dssp TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEE
T ss_pred CCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEE
Confidence 5789999999999999999999999999999999999995 6789999998 999999999999998888888888888
Q ss_pred ecCCCEEEEeeCCCeEEEEeccCCccccccccceeEEeccCCCcccc
Q 006939 82 VHEGKLLGCSYNQSCVGVWVVDISRIEPYTIGSVTRVNGLSESKSSA 128 (625)
Q Consensus 82 ~~dg~lL~sg~~Dg~V~vWdv~~~~~~~~~~~~i~~l~gHs~~v~~~ 128 (625)
+ ++.++++++.|+.|++||+. .+..+..+.+|...+...
T Consensus 247 ~-~~~~l~~~~~dg~i~iwd~~-------~~~~~~~~~~~~~~v~~~ 285 (445)
T 2ovr_B 247 Y-DGRRVVSGAYDFMVKVWDPE-------TETCLHTLQGHTNRVYSL 285 (445)
T ss_dssp E-CSSCEEEEETTSCEEEEEGG-------GTEEEEEECCCSSCEEEE
T ss_pred E-CCCEEEEEcCCCEEEEEECC-------CCcEeEEecCCCCceEEE
Confidence 7 78899999999999999987 445666777777666544
No 110
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.17 E-value=8.9e-11 Score=122.71 Aligned_cols=103 Identities=13% Similarity=0.176 Sum_probs=93.6
Q ss_pred CCC-CEEEEEeCCC---eEEEEECCCC-eEEEEeC-CCCCCeEEEEEcC-CCCEEEEEeCC-cEEEEeCCCCeeEEEEec
Q 006939 1 MSG-YFHFSGSADR---TVKFWDLETF-ELIGSAG-PETSGVRCLTFNP-DGRTLLCGLHE-SLKVFSWEPIRCHDAVDV 72 (625)
Q Consensus 1 PdG-~lLASGS~D~---tVkIWDL~tg-~~i~tl~-~h~~~V~sv~fsP-dg~~LvSgs~D-sIrVWdl~sg~~i~t~~~ 72 (625)
|++ .+|++|+.|+ .|++||++++ ..+..+. +|...|.+++|+| ++.+|++|+.| .|++||+.+++++..+..
T Consensus 224 ~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~ 303 (416)
T 2pm9_A 224 PKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPA 303 (416)
T ss_dssp SSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEEC
T ss_pred CCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecC
Confidence 455 6999999999 9999999986 6677787 8999999999999 89999999998 999999999999999888
Q ss_pred cCCceeEEEe-cCC-CEEEEeeCCCeEEEEecc
Q 006939 73 GWSRLSDLNV-HEG-KLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 73 ~~s~v~~l~~-~dg-~lL~sg~~Dg~V~vWdv~ 103 (625)
+...+..+.| +++ .+|++++.|+.|++|++.
T Consensus 304 ~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~ 336 (416)
T 2pm9_A 304 RGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQ 336 (416)
T ss_dssp SSSCCCCEEECTTCTTEEEECCSSSEEEEEESC
T ss_pred CCCceEEEEECCCCCCEEEEEecCCcEEEEEcc
Confidence 8888989998 677 899999999999999987
No 111
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.17 E-value=5.8e-11 Score=121.02 Aligned_cols=102 Identities=20% Similarity=0.180 Sum_probs=88.1
Q ss_pred CCCEEEEEeCCCeEEEEECCCCeEEEEe-----CCCCCCeEEEEEcCCCC-EEEEEeCC-cEEEEeCCCC----------
Q 006939 2 SGYFHFSGSADRTVKFWDLETFELIGSA-----GPETSGVRCLTFNPDGR-TLLCGLHE-SLKVFSWEPI---------- 64 (625)
Q Consensus 2 dG~lLASGS~D~tVkIWDL~tg~~i~tl-----~~h~~~V~sv~fsPdg~-~LvSgs~D-sIrVWdl~sg---------- 64 (625)
++.+|++|+.|+.|++||+.+++.+..+ .+|...|.+++|+|++. +|++|+.| .|++||++.+
T Consensus 223 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g 302 (357)
T 3i2n_A 223 SMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEG 302 (357)
T ss_dssp SCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTS
T ss_pred CCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCC
Confidence 8999999999999999999887665444 38999999999999998 78999998 9999999753
Q ss_pred ---------eeEEEEeccCCceeEEEe-cCCCEEE-EeeCCCeEEEEecc
Q 006939 65 ---------RCHDAVDVGWSRLSDLNV-HEGKLLG-CSYNQSCVGVWVVD 103 (625)
Q Consensus 65 ---------~~i~t~~~~~s~v~~l~~-~dg~lL~-sg~~Dg~V~vWdv~ 103 (625)
.++..+..+...+..+.| +++.+|+ +++.|+.|++||+.
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~ 352 (357)
T 3i2n_A 303 IEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVT 352 (357)
T ss_dssp CCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEEC
T ss_pred CccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECC
Confidence 355667778888999998 7888887 89999999999987
No 112
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.17 E-value=2.7e-10 Score=122.07 Aligned_cols=128 Identities=16% Similarity=0.189 Sum_probs=100.4
Q ss_pred CCCEEEEEeCCCeEEEEECCCC---eEEEEeCCCCCCeEEEEEcCCCC-EEEEEeCC-cEEEEeCCC-CeeEEEEeccCC
Q 006939 2 SGYFHFSGSADRTVKFWDLETF---ELIGSAGPETSGVRCLTFNPDGR-TLLCGLHE-SLKVFSWEP-IRCHDAVDVGWS 75 (625)
Q Consensus 2 dG~lLASGS~D~tVkIWDL~tg---~~i~tl~~h~~~V~sv~fsPdg~-~LvSgs~D-sIrVWdl~s-g~~i~t~~~~~s 75 (625)
++.+|++|+.|+.|++||++++ ..+..+..|...|++++|+|++. ++++|+.| .|++||++. +.++..+..+..
T Consensus 243 ~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~ 322 (430)
T 2xyi_A 243 HESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKD 322 (430)
T ss_dssp CTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSS
T ss_pred CCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCC
Confidence 6789999999999999999987 56777889999999999999987 68899988 999999997 566777777888
Q ss_pred ceeEEEe-cCC-CEEEEeeCCCeEEEEeccCCcccc-------ccccceeEEeccCCCccccc
Q 006939 76 RLSDLNV-HEG-KLLGCSYNQSCVGVWVVDISRIEP-------YTIGSVTRVNGLSESKSSAS 129 (625)
Q Consensus 76 ~v~~l~~-~dg-~lL~sg~~Dg~V~vWdv~~~~~~~-------~~~~~i~~l~gHs~~v~~~~ 129 (625)
.+..+.+ +++ .+|++++.|+.|++||+....... .....+....+|...+....
T Consensus 323 ~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 385 (430)
T 2xyi_A 323 EIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFS 385 (430)
T ss_dssp CEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEE
T ss_pred CEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEE
Confidence 8999998 566 579999999999999998311100 00134455566666555443
No 113
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.17 E-value=4.4e-10 Score=116.42 Aligned_cols=102 Identities=12% Similarity=0.161 Sum_probs=89.4
Q ss_pred CCCEEEEEeCCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCC-EEEEEeCC-cEEEEeCCCCe-eEEEE--------
Q 006939 2 SGYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGR-TLLCGLHE-SLKVFSWEPIR-CHDAV-------- 70 (625)
Q Consensus 2 dG~lLASGS~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~-~LvSgs~D-sIrVWdl~sg~-~i~t~-------- 70 (625)
++.+|++|+.|+.|++||+.+++++..+.+|...|.+++|+|++. ++++|+.| .|++||++.+. ++..+
T Consensus 155 ~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~ 234 (408)
T 4a11_B 155 KHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKS 234 (408)
T ss_dssp SCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSC
T ss_pred CCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccc
Confidence 567999999999999999999999999999999999999999998 58899988 99999998765 33333
Q ss_pred -------eccCCceeEEEe-cCCCEEEEeeCCCeEEEEecc
Q 006939 71 -------DVGWSRLSDLNV-HEGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 71 -------~~~~s~v~~l~~-~dg~lL~sg~~Dg~V~vWdv~ 103 (625)
..+...+..+.+ +++.+|++++.|+.|++||+.
T Consensus 235 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~ 275 (408)
T 4a11_B 235 QAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSS 275 (408)
T ss_dssp CCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred eeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECC
Confidence 346677888888 799999999999999999988
No 114
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.17 E-value=2.3e-10 Score=131.07 Aligned_cols=103 Identities=15% Similarity=0.256 Sum_probs=95.6
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCC-eeEEEEeccCCcee
Q 006939 1 MSGYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPI-RCHDAVDVGWSRLS 78 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg-~~i~t~~~~~s~v~ 78 (625)
|+|.+|++|+.|++|++||+.+++.+..+.+|...|.+++|+|++.+|++|+.| .|++||+.++ .+...+..+...+.
T Consensus 65 ~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~ 144 (814)
T 3mkq_A 65 ARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVM 144 (814)
T ss_dssp GGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEE
T ss_pred CCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEE
Confidence 689999999999999999999999999999999999999999999999999998 9999999987 67777778888899
Q ss_pred EEEe-c-CCCEEEEeeCCCeEEEEecc
Q 006939 79 DLNV-H-EGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 79 ~l~~-~-dg~lL~sg~~Dg~V~vWdv~ 103 (625)
.+.| + ++.+|++++.|+.|++||+.
T Consensus 145 ~~~~~p~~~~~l~~~~~dg~v~vwd~~ 171 (814)
T 3mkq_A 145 CVAFNPKDPSTFASGCLDRTVKVWSLG 171 (814)
T ss_dssp EEEEETTEEEEEEEEETTSEEEEEETT
T ss_pred EEEEEcCCCCEEEEEeCCCeEEEEECC
Confidence 9988 5 78899999999999999986
No 115
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.17 E-value=3.3e-10 Score=117.32 Aligned_cols=121 Identities=15% Similarity=0.208 Sum_probs=96.7
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCeEEEEe-------------CCCCCCeEEEEEcC-CCCEEEEEeCC-cEEEEeCCCCe
Q 006939 1 MSGYFHFSGSADRTVKFWDLETFELIGSA-------------GPETSGVRCLTFNP-DGRTLLCGLHE-SLKVFSWEPIR 65 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~tg~~i~tl-------------~~h~~~V~sv~fsP-dg~~LvSgs~D-sIrVWdl~sg~ 65 (625)
.+|.+|++|+.|++|++||+.+++....+ .+|...|.+++|+| ++.+|++++.| .|++||+.+++
T Consensus 54 ~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~ 133 (408)
T 4a11_B 54 VEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQ 133 (408)
T ss_dssp TTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTE
T ss_pred CCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCc
Confidence 18999999999999999999987654443 35999999999999 77899999988 99999999999
Q ss_pred eEEEEeccCCceeEEEe-c---CCCEEEEeeCCCeEEEEeccCCccccccccceeEEeccCCCccccc
Q 006939 66 CHDAVDVGWSRLSDLNV-H---EGKLLGCSYNQSCVGVWVVDISRIEPYTIGSVTRVNGLSESKSSAS 129 (625)
Q Consensus 66 ~i~t~~~~~s~v~~l~~-~---dg~lL~sg~~Dg~V~vWdv~~~~~~~~~~~~i~~l~gHs~~v~~~~ 129 (625)
+...+.. ...+..+.+ + ++.++++++.++.|++||+. .+..+..+.+|...+....
T Consensus 134 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~-------~~~~~~~~~~~~~~v~~~~ 193 (408)
T 4a11_B 134 TADVFNF-EETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLK-------SGSCSHILQGHRQEILAVS 193 (408)
T ss_dssp EEEEEEC-SSCEEEEEECSSCSSCCEEEEEESSSSEEEEESS-------SSCCCEEECCCCSCEEEEE
T ss_pred cceeccC-CCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCC-------CcceeeeecCCCCcEEEEE
Confidence 8877763 344566665 3 56699999999999999997 3445566677776665543
No 116
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.17 E-value=2.2e-10 Score=132.62 Aligned_cols=124 Identities=19% Similarity=0.153 Sum_probs=103.1
Q ss_pred CCCCEEEEEeCCCeEEEEECC--CCeEEEEeCCCCCCeEEEEEcCC--CCEEEEEeCC-cEEEEeCCCCe--eEEEEecc
Q 006939 1 MSGYFHFSGSADRTVKFWDLE--TFELIGSAGPETSGVRCLTFNPD--GRTLLCGLHE-SLKVFSWEPIR--CHDAVDVG 73 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~--tg~~i~tl~~h~~~V~sv~fsPd--g~~LvSgs~D-sIrVWdl~sg~--~i~t~~~~ 73 (625)
|+|.+|++|+.|++|++||+. +++++..+.+|...|.+++|+|+ +.+|++|+.| .|++||+.++. +...+..+
T Consensus 19 ~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h 98 (753)
T 3jro_A 19 YYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVH 98 (753)
T ss_dssp SSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCC
T ss_pred CCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCC
Confidence 689999999999999999998 56778899999999999999988 9999999999 99999999987 56666778
Q ss_pred CCceeEEEe-cC--CCEEEEeeCCCeEEEEeccCCccccccccceeEEeccCCCccccc
Q 006939 74 WSRLSDLNV-HE--GKLLGCSYNQSCVGVWVVDISRIEPYTIGSVTRVNGLSESKSSAS 129 (625)
Q Consensus 74 ~s~v~~l~~-~d--g~lL~sg~~Dg~V~vWdv~~~~~~~~~~~~i~~l~gHs~~v~~~~ 129 (625)
...+..+.+ ++ +.++++|+.|+.|++||+.... ......+.+|...+....
T Consensus 99 ~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~-----~~~~~~~~~~~~~v~~l~ 152 (753)
T 3jro_A 99 SASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENG-----TTSPIIIDAHAIGVNSAS 152 (753)
T ss_dssp SSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSS-----CCCCEEEECCSSCEEEEE
T ss_pred CCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCC-----CcceeEeecCCCceEEEE
Confidence 888999998 56 8999999999999999997321 122334556666555544
No 117
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.15 E-value=5.4e-10 Score=119.79 Aligned_cols=123 Identities=12% Similarity=0.126 Sum_probs=98.4
Q ss_pred CCCC-EEEEEeCCCeEEEEECCCCeE-------EEEeCCCCCCeEEEEEcC-CCCEEEEEeCC-cEEEEeCCCC---eeE
Q 006939 1 MSGY-FHFSGSADRTVKFWDLETFEL-------IGSAGPETSGVRCLTFNP-DGRTLLCGLHE-SLKVFSWEPI---RCH 67 (625)
Q Consensus 1 PdG~-lLASGS~D~tVkIWDL~tg~~-------i~tl~~h~~~V~sv~fsP-dg~~LvSgs~D-sIrVWdl~sg---~~i 67 (625)
|++. +|++|+.|++|++||+.++.. ...+.+|...|.+++|+| ++.+|++++.| .|++||++.+ .+.
T Consensus 191 ~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~ 270 (430)
T 2xyi_A 191 PNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPS 270 (430)
T ss_dssp TTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCS
T ss_pred CCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcce
Confidence 4666 999999999999999987322 456778999999999999 67888899988 9999999976 466
Q ss_pred EEEeccCCceeEEEe-cCCC-EEEEeeCCCeEEEEeccCCccccccccceeEEeccCCCccccc
Q 006939 68 DAVDVGWSRLSDLNV-HEGK-LLGCSYNQSCVGVWVVDISRIEPYTIGSVTRVNGLSESKSSAS 129 (625)
Q Consensus 68 ~t~~~~~s~v~~l~~-~dg~-lL~sg~~Dg~V~vWdv~~~~~~~~~~~~i~~l~gHs~~v~~~~ 129 (625)
..+..+...+..+.| +++. +|++|+.|+.|++||++.. ...+..+.+|...+....
T Consensus 271 ~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~------~~~~~~~~~h~~~v~~i~ 328 (430)
T 2xyi_A 271 HTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL------KLKLHSFESHKDEIFQVQ 328 (430)
T ss_dssp EEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCT------TSCSEEEECCSSCEEEEE
T ss_pred eEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCC------CCCeEEeecCCCCEEEEE
Confidence 666677788999998 5565 7899999999999999821 234666777776665443
No 118
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.15 E-value=6.3e-11 Score=128.70 Aligned_cols=103 Identities=16% Similarity=0.109 Sum_probs=89.3
Q ss_pred CCCCEEE----EEeCCCeEEEEECCCC--------e---EEEEeCCCCCCeEEEEEcCC-CCEEEEEeCC-cEEEEeCCC
Q 006939 1 MSGYFHF----SGSADRTVKFWDLETF--------E---LIGSAGPETSGVRCLTFNPD-GRTLLCGLHE-SLKVFSWEP 63 (625)
Q Consensus 1 PdG~lLA----SGS~D~tVkIWDL~tg--------~---~i~tl~~h~~~V~sv~fsPd-g~~LvSgs~D-sIrVWdl~s 63 (625)
|+|++|| +|+.|++|+|||+.++ + .+..+.+|...|.+++|+|+ +.+|++|+.| +|++||++.
T Consensus 102 pdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~ 181 (434)
T 2oit_A 102 CDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTE 181 (434)
T ss_dssp TTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESS
T ss_pred CCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCC
Confidence 6899999 8999999999998754 1 25667889999999999998 8899999999 999999999
Q ss_pred CeeEEEEeccCCceeEEEe-cCCCEEEEeeCCCeEEEEecc
Q 006939 64 IRCHDAVDVGWSRLSDLNV-HEGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 64 g~~i~t~~~~~s~v~~l~~-~dg~lL~sg~~Dg~V~vWdv~ 103 (625)
+.+......+...+.++.| ++|++|++|+.|+.|++||++
T Consensus 182 ~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~ 222 (434)
T 2oit_A 182 TVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT 222 (434)
T ss_dssp SEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT
T ss_pred CcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC
Confidence 8776555556677889988 799999999999999999987
No 119
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.13 E-value=4.3e-10 Score=135.58 Aligned_cols=103 Identities=20% Similarity=0.352 Sum_probs=97.1
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcC--CCCEEEEEeCC-cEEEEeCCCCeeEEEEeccCCce
Q 006939 1 MSGYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNP--DGRTLLCGLHE-SLKVFSWEPIRCHDAVDVGWSRL 77 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsP--dg~~LvSgs~D-sIrVWdl~sg~~i~t~~~~~s~v 77 (625)
|||.+|++|+.|++|++||+.+++++..+.+|...|.+++|+| ++.++++|+.| .|++||+.++.+...+..|...+
T Consensus 667 ~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v 746 (1249)
T 3sfz_A 667 SDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSV 746 (1249)
T ss_dssp TTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCE
T ss_pred cCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCE
Confidence 6899999999999999999999999999999999999999999 45688999999 99999999999999998888999
Q ss_pred eEEEe-cCCCEEEEeeCCCeEEEEecc
Q 006939 78 SDLNV-HEGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 78 ~~l~~-~dg~lL~sg~~Dg~V~vWdv~ 103 (625)
..+.| +++.+|++++.|+.|++||+.
T Consensus 747 ~~~~~sp~~~~l~s~s~dg~v~vwd~~ 773 (1249)
T 3sfz_A 747 NHCRFSPDDELLASCSADGTLRLWDVR 773 (1249)
T ss_dssp EEEEECSSTTEEEEEESSSEEEEEEGG
T ss_pred EEEEEecCCCEEEEEECCCeEEEEeCC
Confidence 99998 799999999999999999987
No 120
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.11 E-value=3.2e-10 Score=115.17 Aligned_cols=102 Identities=9% Similarity=0.001 Sum_probs=88.5
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCe---EEEEeCCCCCCeEEEEEcCCCC-EEEEEeCC-cEEEEeC-CCCeeEEEEec--
Q 006939 1 MSGYFHFSGSADRTVKFWDLETFE---LIGSAGPETSGVRCLTFNPDGR-TLLCGLHE-SLKVFSW-EPIRCHDAVDV-- 72 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~tg~---~i~tl~~h~~~V~sv~fsPdg~-~LvSgs~D-sIrVWdl-~sg~~i~t~~~-- 72 (625)
|+|.+|++|+.|++|++||+.+++ ....+.+|...|.+++|+|++. +|++|+.| .|++||+ ..+.. ..+..
T Consensus 21 ~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~-~~~~~~~ 99 (342)
T 1yfq_A 21 PSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSF-QALTNNE 99 (342)
T ss_dssp GGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSE-EECBSCC
T ss_pred CCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCce-EeccccC
Confidence 578999999999999999998877 3455568999999999999999 99999988 9999999 87765 45555
Q ss_pred cCCceeEEEecCCCEEEEeeCCCeEEEEecc
Q 006939 73 GWSRLSDLNVHEGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 73 ~~s~v~~l~~~dg~lL~sg~~Dg~V~vWdv~ 103 (625)
+...+..+.+..+.+|++++.|+.|++||+.
T Consensus 100 ~~~~v~~l~~~~~~~l~s~~~d~~i~iwd~~ 130 (342)
T 1yfq_A 100 ANLGICRICKYGDDKLIAASWDGLIEVIDPR 130 (342)
T ss_dssp CCSCEEEEEEETTTEEEEEETTSEEEEECHH
T ss_pred CCCceEEEEeCCCCEEEEEcCCCeEEEEccc
Confidence 7778888888339999999999999999987
No 121
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.10 E-value=8.1e-10 Score=112.21 Aligned_cols=116 Identities=11% Similarity=0.138 Sum_probs=94.9
Q ss_pred EEEEeCCCeEEEEECCC-Ce--EEEEeCCCCCCeEEEEEcC-CCCEEEEEeCC-cEEEEeCCCC------eeEEEEeccC
Q 006939 6 HFSGSADRTVKFWDLET-FE--LIGSAGPETSGVRCLTFNP-DGRTLLCGLHE-SLKVFSWEPI------RCHDAVDVGW 74 (625)
Q Consensus 6 LASGS~D~tVkIWDL~t-g~--~i~tl~~h~~~V~sv~fsP-dg~~LvSgs~D-sIrVWdl~sg------~~i~t~~~~~ 74 (625)
|++|+.|+.|++||+.+ +. .......|...|.+++|+| ++.++++|+.| .|++|+++.. .....+..+.
T Consensus 163 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~ 242 (342)
T 1yfq_A 163 LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHR 242 (342)
T ss_dssp EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCC
T ss_pred EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeeccc
Confidence 89999999999999998 54 3445567888999999999 99999999999 9999999876 6666666654
Q ss_pred C---------ceeEEEe-cCCCEEEEeeCCCeEEEEeccCCccccccccceeEEecc-CCCcccc
Q 006939 75 S---------RLSDLNV-HEGKLLGCSYNQSCVGVWVVDISRIEPYTIGSVTRVNGL-SESKSSA 128 (625)
Q Consensus 75 s---------~v~~l~~-~dg~lL~sg~~Dg~V~vWdv~~~~~~~~~~~~i~~l~gH-s~~v~~~ 128 (625)
. .+..+.+ +++++|++++.|+.|++||+. .+..+..+.+| ...+...
T Consensus 243 ~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~-------~~~~~~~~~~~h~~~v~~~ 300 (342)
T 1yfq_A 243 LNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQ-------TRKKIKNFAKFNEDSVVKI 300 (342)
T ss_dssp CCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETT-------TTEEEEECCCCSSSEEEEE
T ss_pred ccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCc-------cHhHhhhhhcccCCCceEe
Confidence 4 7888888 789999999999999999987 34556666776 6655443
No 122
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.07 E-value=1.2e-09 Score=109.44 Aligned_cols=97 Identities=15% Similarity=0.336 Sum_probs=85.4
Q ss_pred EEEEeCCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEe--CC-cEEEEeCCCCeeEEEEeccCCceeEEEe
Q 006939 6 HFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGL--HE-SLKVFSWEPIRCHDAVDVGWSRLSDLNV 82 (625)
Q Consensus 6 LASGS~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs--~D-sIrVWdl~sg~~i~t~~~~~s~v~~l~~ 82 (625)
+++|+.|++|++||...+....... |...+..+.|+|++..+++++ .| .|+|||+.+++++..+..|...|.++.|
T Consensus 214 ~~~~~~~~~i~lwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~ 292 (318)
T 4ggc_A 214 TGGGTSDRHIRIWNVCSGACLSAVD-AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTM 292 (318)
T ss_dssp EEECTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEE
T ss_pred EEecCCCCEEEEEeccccccccccc-ceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEE
Confidence 4677899999999999888766654 557899999999999887654 56 8999999999999999999999999999
Q ss_pred -cCCCEEEEeeCCCeEEEEecc
Q 006939 83 -HEGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 83 -~dg~lL~sg~~Dg~V~vWdv~ 103 (625)
+++++|++|+.|++|++||+.
T Consensus 293 spdg~~l~S~s~D~~v~iWd~~ 314 (318)
T 4ggc_A 293 SPDGATVASAAADETLRLWRCF 314 (318)
T ss_dssp CTTSSCEEEEETTTEEEEECCS
T ss_pred cCCCCEEEEEecCCeEEEEECC
Confidence 799999999999999999985
No 123
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.05 E-value=1.1e-09 Score=126.53 Aligned_cols=126 Identities=17% Similarity=0.171 Sum_probs=101.6
Q ss_pred CCCEEEEEeCCCeEEEEECCCCe--EEEEeCCCCCCeEEEEEcCC--CCEEEEEeCC-cEEEEeCCCCee--EEEEeccC
Q 006939 2 SGYFHFSGSADRTVKFWDLETFE--LIGSAGPETSGVRCLTFNPD--GRTLLCGLHE-SLKVFSWEPIRC--HDAVDVGW 74 (625)
Q Consensus 2 dG~lLASGS~D~tVkIWDL~tg~--~i~tl~~h~~~V~sv~fsPd--g~~LvSgs~D-sIrVWdl~sg~~--i~t~~~~~ 74 (625)
+|.+|++|+.|++|++||+.+++ .+..+.+|...|.+++|+|+ +.++++|+.| .|++||+..+.. ...+..+.
T Consensus 66 ~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~ 145 (753)
T 3jro_A 66 FGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHA 145 (753)
T ss_dssp SCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCS
T ss_pred CCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCC
Confidence 38999999999999999999987 77888999999999999999 9999999999 999999987733 34455667
Q ss_pred CceeEEEe-c-------------CCCEEEEeeCCCeEEEEeccCCccccccccceeEEeccCCCcccccc
Q 006939 75 SRLSDLNV-H-------------EGKLLGCSYNQSCVGVWVVDISRIEPYTIGSVTRVNGLSESKSSASG 130 (625)
Q Consensus 75 s~v~~l~~-~-------------dg~lL~sg~~Dg~V~vWdv~~~~~~~~~~~~i~~l~gHs~~v~~~~~ 130 (625)
..+..+.+ + ++.++++|+.||.|++||++.... .......+.+|...+.....
T Consensus 146 ~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~---~~~~~~~~~~h~~~V~~l~~ 212 (753)
T 3jro_A 146 IGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQ---TYVLESTLEGHSDWVRDVAW 212 (753)
T ss_dssp SCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTT---EEEEEEEECCCSSCEEEEEE
T ss_pred CceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcc---cceeeeeecCCCCcEEEEEe
Confidence 77888888 4 488999999999999999973211 11344566777777665543
No 124
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=98.93 E-value=1.3e-08 Score=105.97 Aligned_cols=99 Identities=14% Similarity=0.189 Sum_probs=84.5
Q ss_pred CCEEEEEeCCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEE-EEEeCC-cEEEEeCCCCeeEEEEeccCCceeEE
Q 006939 3 GYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTL-LCGLHE-SLKVFSWEPIRCHDAVDVGWSRLSDL 80 (625)
Q Consensus 3 G~lLASGS~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~L-vSgs~D-sIrVWdl~sg~~i~t~~~~~s~v~~l 80 (625)
+.++++++.|++|++||+.+++++..+.+| ..+.+++|+|+|.++ ++++.| .|++||+.++++...+..+. .+..+
T Consensus 2 ~~l~vs~~~d~~v~v~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~ 79 (391)
T 1l0q_A 2 TFAYIANSESDNISVIDVTSNKVTATIPVG-SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGV 79 (391)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEE
T ss_pred CEEEEEcCCCCEEEEEECCCCeEEEEeecC-CCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-Cccce
Confidence 568899999999999999999999998877 458999999999976 566666 99999999999988887665 67888
Q ss_pred Ee-cCCCEE-EEeeCCCeEEEEecc
Q 006939 81 NV-HEGKLL-GCSYNQSCVGVWVVD 103 (625)
Q Consensus 81 ~~-~dg~lL-~sg~~Dg~V~vWdv~ 103 (625)
.+ +++++| +++..++.|++||+.
T Consensus 80 ~~spdg~~l~~~~~~~~~v~v~d~~ 104 (391)
T 1l0q_A 80 AVSPDGKQVYVTNMASSTLSVIDTT 104 (391)
T ss_dssp EECTTSSEEEEEETTTTEEEEEETT
T ss_pred EECCCCCEEEEEECCCCEEEEEECC
Confidence 88 788876 555677999999987
No 125
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=98.87 E-value=1.1e-08 Score=107.85 Aligned_cols=103 Identities=10% Similarity=0.071 Sum_probs=89.7
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCeEEE-----EeCCCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCeeEEEEeccC
Q 006939 1 MSGYFHFSGSADRTVKFWDLETFELIG-----SAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVDVGW 74 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~tg~~i~-----tl~~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~i~t~~~~~ 74 (625)
|++.++++++.|++|++||+.+++.+. .+.+|...|.+++|++++.++++++.| .|++||+.++++...+..+.
T Consensus 132 ~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~ 211 (433)
T 3bws_A 132 DNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTG 211 (433)
T ss_dssp SSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSS
T ss_pred CCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCC
Confidence 467888999999999999999999887 456788899999999999999999988 99999999999988887777
Q ss_pred CceeEEEe-cCCCEE-EEeeCCCeEEEEecc
Q 006939 75 SRLSDLNV-HEGKLL-GCSYNQSCVGVWVVD 103 (625)
Q Consensus 75 s~v~~l~~-~dg~lL-~sg~~Dg~V~vWdv~ 103 (625)
..+..+.+ +++.++ ++++.++.|++||++
T Consensus 212 ~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~ 242 (433)
T 3bws_A 212 KWSKILLYDPIRDLVYCSNWISEDISVIDRK 242 (433)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCeeEEEEcCCCCEEEEEecCCCcEEEEECC
Confidence 77888888 678777 555588999999987
No 126
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=98.87 E-value=4.1e-08 Score=102.06 Aligned_cols=101 Identities=18% Similarity=0.211 Sum_probs=84.7
Q ss_pred CCCCEE-EEEeCCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEE-EEeCC-cEEEEeCCCCeeEEEEeccCCce
Q 006939 1 MSGYFH-FSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLL-CGLHE-SLKVFSWEPIRCHDAVDVGWSRL 77 (625)
Q Consensus 1 PdG~lL-ASGS~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~Lv-Sgs~D-sIrVWdl~sg~~i~t~~~~~s~v 77 (625)
|+|.+| ++++.|++|++||+.+++++..+..+. .+.+++|+|++++++ ++..+ .|++||+.+++.+..+..+. .+
T Consensus 41 ~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~-~~ 118 (391)
T 1l0q_A 41 PDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGK-SP 118 (391)
T ss_dssp TTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSS-SE
T ss_pred CCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCCC-Cc
Confidence 678765 788899999999999999998887765 899999999999775 55555 99999999999887776553 46
Q ss_pred eEEEe-cCCCEE-EEeeCCCeEEEEecc
Q 006939 78 SDLNV-HEGKLL-GCSYNQSCVGVWVVD 103 (625)
Q Consensus 78 ~~l~~-~dg~lL-~sg~~Dg~V~vWdv~ 103 (625)
..+.+ +++++| ++++.++.|++||+.
T Consensus 119 ~~~~~s~dg~~l~~~~~~~~~v~~~d~~ 146 (391)
T 1l0q_A 119 LGLALSPDGKKLYVTNNGDKTVSVINTV 146 (391)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEETT
T ss_pred ceEEECCCCCEEEEEeCCCCEEEEEECC
Confidence 77777 688866 788889999999987
No 127
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=98.82 E-value=1.7e-08 Score=109.44 Aligned_cols=102 Identities=12% Similarity=0.085 Sum_probs=80.0
Q ss_pred CC-CCEEEEEeCCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCeeEEEEeccC----
Q 006939 1 MS-GYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVDVGW---- 74 (625)
Q Consensus 1 Pd-G~lLASGS~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~i~t~~~~~---- 74 (625)
|+ +.+|++|+.|++|++||++++..+....+|...|.+++|+|+|.+|++|+.| .|++||.+ +.....+..+.
T Consensus 159 p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~ 237 (434)
T 2oit_A 159 PTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYES 237 (434)
T ss_dssp SSCTTEEEEEETTSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCT
T ss_pred CCCCCEEEEEECCCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCC
Confidence 44 7899999999999999999998877777888999999999999999999999 99999998 55554443332
Q ss_pred ---CceeEEEe-cCCCEEEE-eeCCC------eEEEEecc
Q 006939 75 ---SRLSDLNV-HEGKLLGC-SYNQS------CVGVWVVD 103 (625)
Q Consensus 75 ---s~v~~l~~-~dg~lL~s-g~~Dg------~V~vWdv~ 103 (625)
..+..+.+ +++.++++ +..+| .+++|++.
T Consensus 238 ~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~ 277 (434)
T 2oit_A 238 DHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLP 277 (434)
T ss_dssp TSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECC
T ss_pred CCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEec
Confidence 25677777 45555533 33332 38999987
No 128
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=98.79 E-value=3.8e-08 Score=103.76 Aligned_cols=102 Identities=15% Similarity=0.135 Sum_probs=87.3
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEE-EEeCC-cEEEEeCCCCeeEEEEeccCCcee
Q 006939 1 MSGYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLL-CGLHE-SLKVFSWEPIRCHDAVDVGWSRLS 78 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~Lv-Sgs~D-sIrVWdl~sg~~i~t~~~~~s~v~ 78 (625)
|+|.++++++.|++|++||+.+++.+..+..|...+.+++|+|++..++ +++.+ .|++||+.++++...+..+. .+.
T Consensus 179 ~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~ 257 (433)
T 3bws_A 179 EHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIG-LPR 257 (433)
T ss_dssp GGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCCS-EEE
T ss_pred CCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCCC-Cce
Confidence 4788999999999999999999999999999999999999999999885 44456 99999999999887776543 367
Q ss_pred EEEe-cCCCEEEEee--------CCCeEEEEecc
Q 006939 79 DLNV-HEGKLLGCSY--------NQSCVGVWVVD 103 (625)
Q Consensus 79 ~l~~-~dg~lL~sg~--------~Dg~V~vWdv~ 103 (625)
.+.+ +++++|++++ .|+.|++||+.
T Consensus 258 ~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~ 291 (433)
T 3bws_A 258 GLLLSKDGKELYIAQFSASNQESGGGRLGIYSMD 291 (433)
T ss_dssp EEEECTTSSEEEEEEEESCTTCSCCEEEEEEETT
T ss_pred EEEEcCCCCEEEEEECCCCccccCCCeEEEEECC
Confidence 7777 7888887777 47899999987
No 129
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=98.65 E-value=2.2e-07 Score=103.78 Aligned_cols=101 Identities=9% Similarity=0.107 Sum_probs=86.5
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeC--CCCeeEEEEeccCCce
Q 006939 1 MSGYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSW--EPIRCHDAVDVGWSRL 77 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl--~sg~~i~t~~~~~s~v 77 (625)
|++.++++++.|++|.+||..+++++.++..+.. ++.++|+|||+++++++.| +|.+||+ .+++++..+..+.. .
T Consensus 147 p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g~~-p 224 (543)
T 1nir_A 147 LPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIE-A 224 (543)
T ss_dssp GGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSE-E
T ss_pred CCCEEEEEEcCCCeEEEEECCCceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEecCCC-c
Confidence 4688999999999999999999999999874333 8999999999999999988 9999999 88998888875543 5
Q ss_pred eEEEe-c----CCCEEEEee-CCCeEEEEecc
Q 006939 78 SDLNV-H----EGKLLGCSY-NQSCVGVWVVD 103 (625)
Q Consensus 78 ~~l~~-~----dg~lL~sg~-~Dg~V~vWdv~ 103 (625)
..+.| + +|++|++++ .++.|.+||..
T Consensus 225 ~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~ 256 (543)
T 1nir_A 225 RSVESSKFKGYEDRYTIAGAYWPPQFAIMDGE 256 (543)
T ss_dssp EEEEECCSTTCTTTEEEEEEEESSEEEEEETT
T ss_pred ceEEeCCCcCCCCCEEEEEEccCCeEEEEecc
Confidence 66777 6 899887776 58999999976
No 130
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=98.60 E-value=7.9e-07 Score=95.29 Aligned_cols=101 Identities=14% Similarity=0.055 Sum_probs=79.3
Q ss_pred CCCCEEEEEeCCC---eEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEE-EEeCC---cEEEEeCCCCeeEEEEecc
Q 006939 1 MSGYFHFSGSADR---TVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLL-CGLHE---SLKVFSWEPIRCHDAVDVG 73 (625)
Q Consensus 1 PdG~lLASGS~D~---tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~Lv-Sgs~D---sIrVWdl~sg~~i~t~~~~ 73 (625)
|||+.|++++.|+ +|++||+.++++. .+..|...+.+++|+|||+.|+ +++.+ .|++||+.++++. .+..+
T Consensus 188 pdg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~-~l~~~ 265 (415)
T 2hqs_A 188 PDGSKLAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIR-QVTDG 265 (415)
T ss_dssp TTSSEEEEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-ECCCC
T ss_pred CCCCEEEEEEecCCCcEEEEEECCCCcEE-EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEE-eCcCC
Confidence 7999999999885 9999999999875 4667778899999999999777 66554 4999999988764 34445
Q ss_pred CCceeEEEe-cCCCEEEEeeC-CC--eEEEEecc
Q 006939 74 WSRLSDLNV-HEGKLLGCSYN-QS--CVGVWVVD 103 (625)
Q Consensus 74 ~s~v~~l~~-~dg~lL~sg~~-Dg--~V~vWdv~ 103 (625)
...+..+.| ++|++|+.++. ++ .|.+||+.
T Consensus 266 ~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~ 299 (415)
T 2hqs_A 266 RSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNIN 299 (415)
T ss_dssp SSCEEEEEECTTSSEEEEEECTTSSCEEEEEETT
T ss_pred CCcccceEECCCCCEEEEEECCCCCcEEEEEECC
Confidence 566777887 79998877765 45 55566655
No 131
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=98.44 E-value=1.8e-06 Score=92.51 Aligned_cols=99 Identities=11% Similarity=-0.048 Sum_probs=76.6
Q ss_pred CCEEEEEeCC------CeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeCC----cEEEEeCCCCeeEEEEec
Q 006939 3 GYFHFSGSAD------RTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE----SLKVFSWEPIRCHDAVDV 72 (625)
Q Consensus 3 G~lLASGS~D------~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~D----sIrVWdl~sg~~i~t~~~ 72 (625)
+..++.++.+ ++|++||+. +..+..+.+|...|.+++|+|||++|++++.+ .|++||+.++++.. +..
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~-g~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~-l~~ 220 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYD-GYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQ-VAS 220 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETT-SCSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEE-EEC
T ss_pred CCEEEEEEecCCCCccceEEEEcCC-CCCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEE-eec
Confidence 5566666654 799999997 45567777888999999999999999988764 79999999988864 333
Q ss_pred cCCceeEEEe-cCCCEEE-EeeCCCe--EEEEecc
Q 006939 73 GWSRLSDLNV-HEGKLLG-CSYNQSC--VGVWVVD 103 (625)
Q Consensus 73 ~~s~v~~l~~-~dg~lL~-sg~~Dg~--V~vWdv~ 103 (625)
+...+..+.| ++|+.|+ +++.++. |++||+.
T Consensus 221 ~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~ 255 (415)
T 2hqs_A 221 FPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLA 255 (415)
T ss_dssp CSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETT
T ss_pred CCCcccCEEEcCCCCEEEEEEecCCCceEEEEECC
Confidence 4456777887 7999777 5555554 8888876
No 132
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.42 E-value=2.8e-06 Score=86.02 Aligned_cols=103 Identities=12% Similarity=0.110 Sum_probs=81.3
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCeEEEEeCCCC-CCeEEEEEcCCCCEEE-EEeCC-cEEEEeCCCCeeEEEEeccC---
Q 006939 1 MSGYFHFSGSADRTVKFWDLETFELIGSAGPET-SGVRCLTFNPDGRTLL-CGLHE-SLKVFSWEPIRCHDAVDVGW--- 74 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~tg~~i~tl~~h~-~~V~sv~fsPdg~~Lv-Sgs~D-sIrVWdl~sg~~i~t~~~~~--- 74 (625)
+++.++++++.|++|.+||+.+++.+..+..+. ..+..++|+|+|++++ ++..+ .|.+||+.+++....+..+.
T Consensus 9 ~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~ 88 (349)
T 1jmx_B 9 AGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPG 88 (349)
T ss_dssp TTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTT
T ss_pred CCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccc
Confidence 467899999999999999999999988876543 2578999999998665 44445 89999999998877665432
Q ss_pred ---CceeEEEe-cCCCEEEEeeCC------------CeEEEEecc
Q 006939 75 ---SRLSDLNV-HEGKLLGCSYNQ------------SCVGVWVVD 103 (625)
Q Consensus 75 ---s~v~~l~~-~dg~lL~sg~~D------------g~V~vWdv~ 103 (625)
..+..+.+ ++|++|+++..+ +.|.+||+.
T Consensus 89 ~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~ 133 (349)
T 1jmx_B 89 EVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTA 133 (349)
T ss_dssp EEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGG
T ss_pred cccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECC
Confidence 12456666 789988888754 899999987
No 133
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=98.41 E-value=3.1e-06 Score=85.62 Aligned_cols=100 Identities=11% Similarity=0.085 Sum_probs=80.7
Q ss_pred CCEEEEEeCCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeC-C-cEEEEeCCCCee-EEEEeccCCceeE
Q 006939 3 GYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLH-E-SLKVFSWEPIRC-HDAVDVGWSRLSD 79 (625)
Q Consensus 3 G~lLASGS~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~-D-sIrVWdl~sg~~-i~t~~~~~s~v~~ 79 (625)
+.++++++.+++|.+||+.+++.+..+..+...+ +++|+|+|++++.++. + .|.+||+.+++. ...+..+......
T Consensus 10 ~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~ 88 (331)
T 3u4y_A 10 NFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMAD 88 (331)
T ss_dssp CEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCC
T ss_pred CEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccc
Confidence 4568899999999999999999988887766667 9999999997776655 5 899999999887 6666666665553
Q ss_pred EEe-cCCCEEEEeeCCC---eEEEEecc
Q 006939 80 LNV-HEGKLLGCSYNQS---CVGVWVVD 103 (625)
Q Consensus 80 l~~-~dg~lL~sg~~Dg---~V~vWdv~ 103 (625)
+.+ +++++|+++..++ .|.+||+.
T Consensus 89 ~~~s~dg~~l~~~~~~~~~~~i~v~d~~ 116 (331)
T 3u4y_A 89 VDITPDDQFAVTVTGLNHPFNMQSYSFL 116 (331)
T ss_dssp EEECTTSSEEEECCCSSSSCEEEEEETT
T ss_pred eEECCCCCEEEEecCCCCcccEEEEECC
Confidence 666 7899888665553 89999987
No 134
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.37 E-value=1.7e-06 Score=98.43 Aligned_cols=101 Identities=14% Similarity=0.110 Sum_probs=82.6
Q ss_pred CCCCEEEEEeC-CC-----eEEEEECCCCeEEEEeCCCCC------------------------CeEEEEEcCCCCEEEE
Q 006939 1 MSGYFHFSGSA-DR-----TVKFWDLETFELIGSAGPETS------------------------GVRCLTFNPDGRTLLC 50 (625)
Q Consensus 1 PdG~lLASGS~-D~-----tVkIWDL~tg~~i~tl~~h~~------------------------~V~sv~fsPdg~~LvS 50 (625)
|||++|++++. |+ +|++||+.+++....+..+.. .|.+++|+|||++|+.
T Consensus 46 pdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~ 125 (741)
T 2ecf_A 46 PDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDAQRLLF 125 (741)
T ss_dssp TTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECTTSSEEEE
T ss_pred cCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCCCEEEE
Confidence 79999999998 88 999999999998777655432 3789999999999998
Q ss_pred EeCCcEEEEeCCCC---eeEEEEeccCCceeEEEe-cCCCEEEEeeCCCeEEEEecc
Q 006939 51 GLHESLKVFSWEPI---RCHDAVDVGWSRLSDLNV-HEGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 51 gs~DsIrVWdl~sg---~~i~t~~~~~s~v~~l~~-~dg~lL~sg~~Dg~V~vWdv~ 103 (625)
++.+.|++||+.++ ... .+..+...+..+.| ++|++|+.++. +.|++||+.
T Consensus 126 ~~~~~i~~~d~~~~~~~~~~-~l~~~~~~~~~~~~SPDG~~la~~~~-~~i~~~d~~ 180 (741)
T 2ecf_A 126 PLGGELYLYDLKQEGKAAVR-QLTHGEGFATDAKLSPKGGFVSFIRG-RNLWVIDLA 180 (741)
T ss_dssp EETTEEEEEESSSCSTTSCC-BCCCSSSCEEEEEECTTSSEEEEEET-TEEEEEETT
T ss_pred EeCCcEEEEECCCCCcceEE-EcccCCcccccccCCCCCCEEEEEeC-CcEEEEecC
Confidence 88789999999988 443 33344455777777 89999988875 589999987
No 135
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=98.36 E-value=4.2e-06 Score=93.38 Aligned_cols=102 Identities=13% Similarity=0.124 Sum_probs=84.9
Q ss_pred CCCCEEEEEeCCCeEEEEEC--CCCeEEEEeCCCCCCeEEEEEcC----CCCEEEEEeC-C-cEEEEeCCCCeeEEEEec
Q 006939 1 MSGYFHFSGSADRTVKFWDL--ETFELIGSAGPETSGVRCLTFNP----DGRTLLCGLH-E-SLKVFSWEPIRCHDAVDV 72 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL--~tg~~i~tl~~h~~~V~sv~fsP----dg~~LvSgs~-D-sIrVWdl~sg~~i~t~~~ 72 (625)
|||++|++++.|++|++||+ .+++++..+.. ...++.++|+| ||+++++++. + +|.|||..+++++..+..
T Consensus 188 pdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~-g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~ 266 (543)
T 1nir_A 188 ASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKI-GIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVST 266 (543)
T ss_dssp TTSCEEEEEETTSEEEEEETTSSSCEEEEEEEC-CSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEEC
T ss_pred CCCCEEEEECCCCeEEEEECcCCCCcEEEEEec-CCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecc
Confidence 79999999999999999999 89999988874 56789999999 9999998874 5 999999999999888764
Q ss_pred c-----------CCceeEEEe-c-CCCEEEEeeCCCeEEEEecc
Q 006939 73 G-----------WSRLSDLNV-H-EGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 73 ~-----------~s~v~~l~~-~-dg~lL~sg~~Dg~V~vWdv~ 103 (625)
+ ...+..+.+ + .+.++++...++.|.+||+.
T Consensus 267 ~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~ 310 (543)
T 1nir_A 267 RGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYK 310 (543)
T ss_dssp CEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECT
T ss_pred cCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEec
Confidence 2 124566666 5 44566777888999999987
No 136
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.36 E-value=4.7e-06 Score=81.35 Aligned_cols=102 Identities=10% Similarity=0.035 Sum_probs=76.2
Q ss_pred CCCCEEE-EEeCCCeEEEEEC--CCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEe-CC-cEEEEeCC-CCeeEEEEeccC
Q 006939 1 MSGYFHF-SGSADRTVKFWDL--ETFELIGSAGPETSGVRCLTFNPDGRTLLCGL-HE-SLKVFSWE-PIRCHDAVDVGW 74 (625)
Q Consensus 1 PdG~lLA-SGS~D~tVkIWDL--~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs-~D-sIrVWdl~-sg~~i~t~~~~~ 74 (625)
|||++|+ +++.|+.++||++ .+++ ...+..|...+.++.|+|+|.+++.++ .+ .++||++. .+.....+..+.
T Consensus 138 pdg~~l~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 216 (297)
T 2ojh_A 138 PDGKSFTYCGIRDQVFDIYSMDIDSGV-ETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSA 216 (297)
T ss_dssp TTSSEEEEEEEETTEEEEEEEETTTCC-EEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCS
T ss_pred CCCCEEEEEECCCCceEEEEEECCCCc-ceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCC
Confidence 6888776 8889999999985 4344 456677778899999999999877655 45 88999886 444555555444
Q ss_pred CceeEEEe-cCCCEEEEeeCC-----------CeEEEEecc
Q 006939 75 SRLSDLNV-HEGKLLGCSYNQ-----------SCVGVWVVD 103 (625)
Q Consensus 75 s~v~~l~~-~dg~lL~sg~~D-----------g~V~vWdv~ 103 (625)
..+..+.| +++++|+.++.+ +.|.+||+.
T Consensus 217 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~ 257 (297)
T 2ojh_A 217 YGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMD 257 (297)
T ss_dssp EEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETT
T ss_pred cccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecC
Confidence 55666777 799988777665 568999886
No 137
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.33 E-value=3.8e-06 Score=82.02 Aligned_cols=101 Identities=12% Similarity=0.014 Sum_probs=74.7
Q ss_pred CCCCEEEEEeCCCeEEEEECCC-CeEEEEeCCC-CCCeEEEEEcCCCCEEEEEe--CC-cEEE--EeCCCCeeEEEEecc
Q 006939 1 MSGYFHFSGSADRTVKFWDLET-FELIGSAGPE-TSGVRCLTFNPDGRTLLCGL--HE-SLKV--FSWEPIRCHDAVDVG 73 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~t-g~~i~tl~~h-~~~V~sv~fsPdg~~LvSgs--~D-sIrV--Wdl~sg~~i~t~~~~ 73 (625)
|||++|++++ ++.|.+||+.+ ++......+| ...+.+++|+|+|.+|+.++ .+ ..+| |+...+... .+..+
T Consensus 51 pdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~ 128 (297)
T 2ojh_A 51 PDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGTPR-LMTKN 128 (297)
T ss_dssp TTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCCCE-ECCSS
T ss_pred CCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCceE-EeecC
Confidence 7899999987 78999999999 8887777666 36789999999999999887 32 4444 455555432 22222
Q ss_pred CCceeEEEe-cCCCEEE-EeeCCCeEEEEeccC
Q 006939 74 WSRLSDLNV-HEGKLLG-CSYNQSCVGVWVVDI 104 (625)
Q Consensus 74 ~s~v~~l~~-~dg~lL~-sg~~Dg~V~vWdv~~ 104 (625)
..+..+.+ +++++|+ ++..++.+++|+++.
T Consensus 129 -~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~ 160 (297)
T 2ojh_A 129 -LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDI 160 (297)
T ss_dssp -SSEEEEEECTTSSEEEEEEEETTEEEEEEEET
T ss_pred -CCccceEECCCCCEEEEEECCCCceEEEEEEC
Confidence 23566666 6888776 778889999999863
No 138
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=98.33 E-value=8.9e-07 Score=98.21 Aligned_cols=100 Identities=9% Similarity=-0.004 Sum_probs=81.1
Q ss_pred CCCCEEEEEeCC----CeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeCC---cEEEEeCCCCeeEEEEecc
Q 006939 1 MSGYFHFSGSAD----RTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE---SLKVFSWEPIRCHDAVDVG 73 (625)
Q Consensus 1 PdG~lLASGS~D----~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~D---sIrVWdl~sg~~i~t~~~~ 73 (625)
|||++|++++.| .+|.+||+.+++.. .+..|...+..++|+|||++|+++..+ .|++||+.++++. .+..+
T Consensus 159 pDG~~la~~~~~~~~~~~i~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~ 236 (582)
T 3o4h_A 159 IRGDLIAGLGFFGGGRVSLFTSNLSSGGLR-VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELP 236 (582)
T ss_dssp EETTEEEEEEEEETTEEEEEEEETTTCCCE-EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCS
T ss_pred CCCCEEEEEEEcCCCCeEEEEEcCCCCCce-EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCC
Confidence 789999988887 78999999988865 667888889999999999999966554 5999999998877 44433
Q ss_pred CCceeEEE--------e-cCCCEEEEeeCCCeEEEEec
Q 006939 74 WSRLSDLN--------V-HEGKLLGCSYNQSCVGVWVV 102 (625)
Q Consensus 74 ~s~v~~l~--------~-~dg~lL~sg~~Dg~V~vWdv 102 (625)
...+..+. | ++|++++++..++.+++|++
T Consensus 237 ~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 237 SKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID 274 (582)
T ss_dssp CSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET
T ss_pred CcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE
Confidence 33333333 5 78899999999999999987
No 139
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=98.33 E-value=1.1e-05 Score=81.82 Aligned_cols=103 Identities=8% Similarity=-0.024 Sum_probs=81.8
Q ss_pred CCCCEEEEEe--CCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCeeEEEEec----c
Q 006939 1 MSGYFHFSGS--ADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVDV----G 73 (625)
Q Consensus 1 PdG~lLASGS--~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~i~t~~~----~ 73 (625)
|+|.+++.++ .++.|.+||+.+++.+..+..+...+.++.|+|+|++++.+..+ .|.+||..+++....+.. .
T Consensus 150 ~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~ 229 (353)
T 3vgz_A 150 DATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGK 229 (353)
T ss_dssp TTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSS
T ss_pred CCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCC
Confidence 5788776665 58899999999999999888666778999999999998888877 899999999998877654 2
Q ss_pred CCceeEEEe-cCCCEEEEe-eCCCeEEEEecc
Q 006939 74 WSRLSDLNV-HEGKLLGCS-YNQSCVGVWVVD 103 (625)
Q Consensus 74 ~s~v~~l~~-~dg~lL~sg-~~Dg~V~vWdv~ 103 (625)
...+..+.+ ++++++..+ ..++.|.+||..
T Consensus 230 ~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~ 261 (353)
T 3vgz_A 230 EHFFINISLDTARQRAFITDSKAAEVLVVDTR 261 (353)
T ss_dssp CCCEEEEEEETTTTEEEEEESSSSEEEEEETT
T ss_pred CcccceEEECCCCCEEEEEeCCCCEEEEEECC
Confidence 233455666 688866554 455899999986
No 140
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=98.33 E-value=6.9e-06 Score=83.36 Aligned_cols=103 Identities=17% Similarity=0.088 Sum_probs=81.4
Q ss_pred CCCC-EEEEEeCCCeEEEEECCCCeEEEEeCCCCCC---------eEEEEEcCCCCEEEEEe--CC-cEEEEeCCCCeeE
Q 006939 1 MSGY-FHFSGSADRTVKFWDLETFELIGSAGPETSG---------VRCLTFNPDGRTLLCGL--HE-SLKVFSWEPIRCH 67 (625)
Q Consensus 1 PdG~-lLASGS~D~tVkIWDL~tg~~i~tl~~h~~~---------V~sv~fsPdg~~LvSgs--~D-sIrVWdl~sg~~i 67 (625)
|||+ +++++..++.|.+||+.+++.+..+..+... +.++.|+|+|++++.+. .+ .|.+||..+++..
T Consensus 98 ~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~ 177 (353)
T 3vgz_A 98 NTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLK 177 (353)
T ss_dssp TTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEE
T ss_pred CCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceE
Confidence 5777 4556667899999999999998887665322 78999999999877665 34 7999999999988
Q ss_pred EEEeccCCceeEEEe-cCCCEEEEeeCCCeEEEEecc
Q 006939 68 DAVDVGWSRLSDLNV-HEGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 68 ~t~~~~~s~v~~l~~-~dg~lL~sg~~Dg~V~vWdv~ 103 (625)
..+......+..+.+ +++++|+.+..++.|.+||..
T Consensus 178 ~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~ 214 (353)
T 3vgz_A 178 TAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTA 214 (353)
T ss_dssp EEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETT
T ss_pred EEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECC
Confidence 877633344556666 789989888889999999987
No 141
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=98.28 E-value=7e-06 Score=83.05 Aligned_cols=102 Identities=10% Similarity=0.086 Sum_probs=79.7
Q ss_pred CCCCEEEEEeC-CCeEEEEECCCCeE-EEEeCCCCCCeEEEEEcCCCCEEEEEeCC----cEEEEeCCCCeeEEEEeccC
Q 006939 1 MSGYFHFSGSA-DRTVKFWDLETFEL-IGSAGPETSGVRCLTFNPDGRTLLCGLHE----SLKVFSWEPIRCHDAVDVGW 74 (625)
Q Consensus 1 PdG~lLASGS~-D~tVkIWDL~tg~~-i~tl~~h~~~V~sv~fsPdg~~LvSgs~D----sIrVWdl~sg~~i~t~~~~~ 74 (625)
|||++++.++. ++.|.+||+.+++. ...+..+.....+++|+|+|++++++..+ .|.+||+.+++.+..+..+.
T Consensus 49 ~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~ 128 (331)
T 3u4y_A 49 SDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPY 128 (331)
T ss_dssp SSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCT
T ss_pred CCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECCC
Confidence 68886655554 89999999999998 77777776666669999999998866555 69999999999888776654
Q ss_pred CceeEEEe-cCCC-EEEEeeCCCe-EEEEecc
Q 006939 75 SRLSDLNV-HEGK-LLGCSYNQSC-VGVWVVD 103 (625)
Q Consensus 75 s~v~~l~~-~dg~-lL~sg~~Dg~-V~vWdv~ 103 (625)
. ...+.+ ++|+ +++++..++. |.+|+++
T Consensus 129 ~-~~~~~~spdg~~l~~~~~~~~~~i~~~~~~ 159 (331)
T 3u4y_A 129 D-AVGIAISPNGNGLILIDRSSANTVRRFKID 159 (331)
T ss_dssp T-EEEEEECTTSSCEEEEEETTTTEEEEEEEC
T ss_pred C-ccceEECCCCCEEEEEecCCCceEEEEEEC
Confidence 4 466777 7887 4556666678 9999987
No 142
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=98.27 E-value=4.5e-06 Score=84.04 Aligned_cols=101 Identities=13% Similarity=0.185 Sum_probs=74.7
Q ss_pred CCCCEEEEEeCC-CeEEEEECC--CCe--EEEEeCCCCCCeEEEEEcCCCCEEEEEeC-C-cEEEEeCC---CCeeEEEE
Q 006939 1 MSGYFHFSGSAD-RTVKFWDLE--TFE--LIGSAGPETSGVRCLTFNPDGRTLLCGLH-E-SLKVFSWE---PIRCHDAV 70 (625)
Q Consensus 1 PdG~lLASGS~D-~tVkIWDL~--tg~--~i~tl~~h~~~V~sv~fsPdg~~LvSgs~-D-sIrVWdl~---sg~~i~t~ 70 (625)
|+|++|++++.+ +.|.+|++. +++ .+..+..+. .+..++|+|+|++++.++. + .|.+||+. .+.....+
T Consensus 47 pdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~ 125 (343)
T 1ri6_A 47 PDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVV 125 (343)
T ss_dssp TTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEE
T ss_pred CCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccc
Confidence 689988888876 999999997 555 344555443 7899999999998876665 5 79999994 33444444
Q ss_pred eccCCceeEEEe-cCCCEEEEee-CCCeEEEEecc
Q 006939 71 DVGWSRLSDLNV-HEGKLLGCSY-NQSCVGVWVVD 103 (625)
Q Consensus 71 ~~~~s~v~~l~~-~dg~lL~sg~-~Dg~V~vWdv~ 103 (625)
..+ ..+..+.+ +++++|+++. .++.|.+||+.
T Consensus 126 ~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~ 159 (343)
T 1ri6_A 126 EGL-DGCHSANISPDNRTLWVPALKQDRICLFTVS 159 (343)
T ss_dssp CCC-TTBCCCEECTTSSEEEEEEGGGTEEEEEEEC
T ss_pred cCC-CCceEEEECCCCCEEEEecCCCCEEEEEEec
Confidence 433 33566666 7888776665 88999999987
No 143
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=98.26 E-value=2.1e-05 Score=78.91 Aligned_cols=67 Identities=13% Similarity=0.085 Sum_probs=54.7
Q ss_pred CeEEEEEcCCCCEEEEEeCCcEEEEeCCCCeeEEEEeccCCceeEEEe-cCCCEEEEeeCCCeEEEEecc
Q 006939 35 GVRCLTFNPDGRTLLCGLHESLKVFSWEPIRCHDAVDVGWSRLSDLNV-HEGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 35 ~V~sv~fsPdg~~LvSgs~DsIrVWdl~sg~~i~t~~~~~s~v~~l~~-~dg~lL~sg~~Dg~V~vWdv~ 103 (625)
.+.+++|+|||++++++ .+.|.+||+.+++....+..+. .+..+.+ +++++|++++.++.|.+||+.
T Consensus 242 ~~~~~~~s~dg~~l~~~-~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~i~v~d~~ 309 (337)
T 1pby_B 242 FYFSTAVNPAKTRAFGA-YNVLESFDLEKNASIKRVPLPH-SYYSVNVSTDGSTVWLGGALGDLAAYDAE 309 (337)
T ss_dssp CEEEEEECTTSSEEEEE-ESEEEEEETTTTEEEEEEECSS-CCCEEEECTTSCEEEEESBSSEEEEEETT
T ss_pred ceeeEEECCCCCEEEEe-CCeEEEEECCCCcCcceecCCC-ceeeEEECCCCCEEEEEcCCCcEEEEECc
Confidence 45578999999998887 3599999999998887776553 3556666 789988888889999999987
No 144
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.24 E-value=3.9e-06 Score=95.30 Aligned_cols=94 Identities=9% Similarity=-0.036 Sum_probs=74.1
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCe--EEEEeCCCCCCeEEEEEcCCCCEEEEEeCCcEEEEeCCCCeeEEEEeccCCc--
Q 006939 1 MSGYFHFSGSADRTVKFWDLETFE--LIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFSWEPIRCHDAVDVGWSR-- 76 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~tg~--~i~tl~~h~~~V~sv~fsPdg~~LvSgs~DsIrVWdl~sg~~i~t~~~~~s~-- 76 (625)
|||++|++++. ++|.+||+.++. .+..+..|...+.+++|+|||++|+.++.+.|++||+.+++.......+...
T Consensus 118 pDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~~~i~~~d~~~g~~~~~~~~~~~~~~ 196 (741)
T 2ecf_A 118 PDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRGRNLWVIDLASGRQMQLTADGSTTIG 196 (741)
T ss_dssp TTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEETTEEEEEETTTTEEEECCCCCCSSEE
T ss_pred CCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeCCcEEEEecCCCCEEEeccCCcccee
Confidence 79999999986 899999999883 4456777888899999999999999888779999999998876544333221
Q ss_pred --------------eeEEEe-cCCCEEEEeeCCC
Q 006939 77 --------------LSDLNV-HEGKLLGCSYNQS 95 (625)
Q Consensus 77 --------------v~~l~~-~dg~lL~sg~~Dg 95 (625)
+..+.| ++|++|+.+..|+
T Consensus 197 ~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~ 230 (741)
T 2ecf_A 197 NGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDE 230 (741)
T ss_dssp ESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEEC
T ss_pred ccccceeeeeccccccceEECCCCCEEEEEEEcC
Confidence 245666 7999888876654
No 145
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=98.23 E-value=1.5e-05 Score=80.06 Aligned_cols=100 Identities=13% Similarity=0.085 Sum_probs=77.7
Q ss_pred CEEEEEeCCCeEEEEECCCCeEEEEeCCCC-C-CeEEEEEcCCCCEEE-EEeCC-cEEEEeCCCCeeEEEEeccC-----
Q 006939 4 YFHFSGSADRTVKFWDLETFELIGSAGPET-S-GVRCLTFNPDGRTLL-CGLHE-SLKVFSWEPIRCHDAVDVGW----- 74 (625)
Q Consensus 4 ~lLASGS~D~tVkIWDL~tg~~i~tl~~h~-~-~V~sv~fsPdg~~Lv-Sgs~D-sIrVWdl~sg~~i~t~~~~~----- 74 (625)
.+|++++.|++|.+||+.+++.+..+.... . .+..++|+|+|+.++ ++..+ .|.+||+.+++....+....
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~ 81 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERV 81 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEE
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccccc
Confidence 578999999999999999999988775332 2 478999999998665 55555 89999999998877665432
Q ss_pred CceeEEEe-cCCCEEEEee------------CCCeEEEEecc
Q 006939 75 SRLSDLNV-HEGKLLGCSY------------NQSCVGVWVVD 103 (625)
Q Consensus 75 s~v~~l~~-~dg~lL~sg~------------~Dg~V~vWdv~ 103 (625)
..+..+.+ +++++|+++. .++.|.+||+.
T Consensus 82 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~ 123 (337)
T 1pby_B 82 KSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAE 123 (337)
T ss_dssp ECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETT
T ss_pred ccccceEECCCCCEEEEEecccccccccccccCceEEEEECC
Confidence 13455666 7888887775 56899999987
No 146
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=98.21 E-value=2.3e-06 Score=96.77 Aligned_cols=101 Identities=13% Similarity=0.059 Sum_probs=79.2
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCeEEEEeCCCCC---CeEEEEEcCCCCEEEEEeC----------CcEEEEeCCCCeeE
Q 006939 1 MSGYFHFSGSADRTVKFWDLETFELIGSAGPETS---GVRCLTFNPDGRTLLCGLH----------ESLKVFSWEPIRCH 67 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~tg~~i~tl~~h~~---~V~sv~fsPdg~~LvSgs~----------DsIrVWdl~sg~~i 67 (625)
|||+++++ +.|++|++||+.++++...+.+|.. .|.+++|+|||++|++++. ..|.+||+.++++.
T Consensus 26 pdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~ 104 (723)
T 1xfd_A 26 SDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQ 104 (723)
T ss_dssp SSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCE
T ss_pred CCCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceE
Confidence 68998877 7899999999999998888887765 4999999999999998875 26889999988763
Q ss_pred EEEe--ccCCceeEEEe-cCCCEEEEeeCCCeEEEEecc
Q 006939 68 DAVD--VGWSRLSDLNV-HEGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 68 ~t~~--~~~s~v~~l~~-~dg~lL~sg~~Dg~V~vWdv~ 103 (625)
.... .+...+..+.| ++|+.|+.++. +.|++||+.
T Consensus 105 ~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~ 142 (723)
T 1xfd_A 105 SLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHV 142 (723)
T ss_dssp ECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSS
T ss_pred eccCCccccccccccEECCCCCEEEEEEC-CeEEEEECC
Confidence 2211 12222455666 79999988876 789999987
No 147
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=98.21 E-value=5.5e-06 Score=98.97 Aligned_cols=102 Identities=16% Similarity=0.007 Sum_probs=85.5
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeC----------C-cEEEEeCCCCeeEEE
Q 006939 1 MSGYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLH----------E-SLKVFSWEPIRCHDA 69 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~----------D-sIrVWdl~sg~~i~t 69 (625)
|||++|++++.|++|++||+.+++....+.+|...+.+++|+|||++|+.++. + .|++||+.+++ ...
T Consensus 388 pDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~ 466 (1045)
T 1k32_A 388 RNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFA 466 (1045)
T ss_dssp TTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEE
T ss_pred CCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEE
Confidence 79999999999999999999999988888789899999999999998886643 2 79999999887 444
Q ss_pred EeccCCceeEEEe-cCCCEEEEeeCCCeEEEEecc
Q 006939 70 VDVGWSRLSDLNV-HEGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 70 ~~~~~s~v~~l~~-~dg~lL~sg~~Dg~V~vWdv~ 103 (625)
+..+...+..+.| ++|++|+.++.++...+|+..
T Consensus 467 l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~ 501 (1045)
T 1k32_A 467 ATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRV 501 (1045)
T ss_dssp CSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSS
T ss_pred eeCCCcccCCceEcCCCCEEEEEecccCCcCcchh
Confidence 5455555666767 899999998888888888754
No 148
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=98.20 E-value=3.9e-06 Score=94.95 Aligned_cols=94 Identities=7% Similarity=0.008 Sum_probs=71.5
Q ss_pred CCCCEEEEEeCC---------CeEEEEECCCCeEE--EEeCCCCCCeEEEEEcCCCCEEEEEeCCcEEEEeCCCCeeEEE
Q 006939 1 MSGYFHFSGSAD---------RTVKFWDLETFELI--GSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFSWEPIRCHDA 69 (625)
Q Consensus 1 PdG~lLASGS~D---------~tVkIWDL~tg~~i--~tl~~h~~~V~sv~fsPdg~~LvSgs~DsIrVWdl~sg~~i~t 69 (625)
|||++|++++.| +.+.+||+.++++. ....+|...+.+++|+|||++|+.++.+.|++||+.++++...
T Consensus 70 pDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~~g~~~~~ 149 (723)
T 1xfd_A 70 PDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFENNIYYCAHVGKQAIRV 149 (723)
T ss_dssp TTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEETTEEEEESSSSSCCEEE
T ss_pred CCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEECCeEEEEECCCCceEEE
Confidence 799999999875 67889999998862 2223455558899999999999988877999999999887665
Q ss_pred EeccCCc------------------eeEEEe-cCCCEEEEeeCC
Q 006939 70 VDVGWSR------------------LSDLNV-HEGKLLGCSYNQ 94 (625)
Q Consensus 70 ~~~~~s~------------------v~~l~~-~dg~lL~sg~~D 94 (625)
...+... +..+.| ++|+.|+.++.+
T Consensus 150 ~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~ 193 (723)
T 1xfd_A 150 VSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAIN 193 (723)
T ss_dssp ECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEE
T ss_pred ecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEEC
Confidence 5433222 256777 899988777644
No 149
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=98.19 E-value=1.1e-05 Score=96.52 Aligned_cols=101 Identities=8% Similarity=0.143 Sum_probs=84.4
Q ss_pred CCCEEEEEeCCCeEE-EEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCeeEEEEeccCCceeE
Q 006939 2 SGYFHFSGSADRTVK-FWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVDVGWSRLSD 79 (625)
Q Consensus 2 dG~lLASGS~D~tVk-IWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~i~t~~~~~s~v~~ 79 (625)
||+.|+.++.+..+. +||+.+++... +.+|...+.+++|+|||++|++++.+ .|++||+.+++.......+...+..
T Consensus 347 dg~~l~~~s~~~~l~~~~d~~~~~~~~-l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~ 425 (1045)
T 1k32_A 347 TKVAFIHGTREGDFLGIYDYRTGKAEK-FEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITD 425 (1045)
T ss_dssp SEEEEEEEETTEEEEEEEETTTCCEEE-CCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCC
T ss_pred CCCeEEEEECCCceEEEEECCCCCceE-ecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccc
Confidence 567888888888888 89998877544 44888899999999999999999888 9999999999988777666666777
Q ss_pred EEe-cCCCEEEEeeCCC----------eEEEEecc
Q 006939 80 LNV-HEGKLLGCSYNQS----------CVGVWVVD 103 (625)
Q Consensus 80 l~~-~dg~lL~sg~~Dg----------~V~vWdv~ 103 (625)
+.| ++|++|+.++.++ .|++||+.
T Consensus 426 ~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~ 460 (1045)
T 1k32_A 426 FTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDME 460 (1045)
T ss_dssp EEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETT
T ss_pred eEECCCCCeEEEEecCccccccCCCCCeEEEEECC
Confidence 777 8999988776644 89999987
No 150
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=98.19 E-value=1.2e-05 Score=80.99 Aligned_cols=102 Identities=19% Similarity=0.221 Sum_probs=73.6
Q ss_pred CCCCEEEEEe-CCCeEEEEEC---CCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEe-CC-cEEEEeCCC-CeeEE----E
Q 006939 1 MSGYFHFSGS-ADRTVKFWDL---ETFELIGSAGPETSGVRCLTFNPDGRTLLCGL-HE-SLKVFSWEP-IRCHD----A 69 (625)
Q Consensus 1 PdG~lLASGS-~D~tVkIWDL---~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs-~D-sIrVWdl~s-g~~i~----t 69 (625)
|+|++|+.++ .++.|.+||+ .+++.+..+..+ ..+.+++|+|+|+++++++ .+ .|++||+.. ++... .
T Consensus 93 ~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~ 171 (343)
T 1ri6_A 93 HQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGL-DGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAE 171 (343)
T ss_dssp TTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCC-TTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEE
T ss_pred CCCCEEEEEecCCCeEEEEECCCCccccccccccCC-CCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccc
Confidence 6888776665 4889999999 445556666554 4689999999999888766 55 999999987 65432 2
Q ss_pred Eec-cCCceeEEEe-cCCCEE-EEeeCCCeEEEEecc
Q 006939 70 VDV-GWSRLSDLNV-HEGKLL-GCSYNQSCVGVWVVD 103 (625)
Q Consensus 70 ~~~-~~s~v~~l~~-~dg~lL-~sg~~Dg~V~vWdv~ 103 (625)
+.. ....+..+.+ +++++| +++..++.|.+|+++
T Consensus 172 ~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~ 208 (343)
T 1ri6_A 172 VTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELK 208 (343)
T ss_dssp EECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESS
T ss_pred cccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEec
Confidence 222 2234566777 788866 455578999999986
No 151
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=98.17 E-value=2.1e-05 Score=81.09 Aligned_cols=102 Identities=16% Similarity=0.172 Sum_probs=74.1
Q ss_pred CCCCEEEEEe-CCCeEEEEECCCCeE--EEE---eCCCCCCeEEEEEcCCCCEEEEEe-C-C-cEEEEeCC--CCe--eE
Q 006939 1 MSGYFHFSGS-ADRTVKFWDLETFEL--IGS---AGPETSGVRCLTFNPDGRTLLCGL-H-E-SLKVFSWE--PIR--CH 67 (625)
Q Consensus 1 PdG~lLASGS-~D~tVkIWDL~tg~~--i~t---l~~h~~~V~sv~fsPdg~~LvSgs-~-D-sIrVWdl~--sg~--~i 67 (625)
|||++|+.++ .+++|.+||+.++.+ +.. ...+...+..++|+|||++|+.+. . + .|.+|++. ++. .+
T Consensus 220 pdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~ 299 (361)
T 3scy_A 220 SDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKV 299 (361)
T ss_dssp TTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEE
T ss_pred CCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEe
Confidence 7898887776 689999999988765 222 234456678999999999886544 4 4 89999996 444 33
Q ss_pred EEEeccCCceeEEEe-cCCCEEEEee-CCCeEEEEecc
Q 006939 68 DAVDVGWSRLSDLNV-HEGKLLGCSY-NQSCVGVWVVD 103 (625)
Q Consensus 68 ~t~~~~~s~v~~l~~-~dg~lL~sg~-~Dg~V~vWdv~ 103 (625)
..+.. ...+..+.| +++++|+++. .++.|.+|.++
T Consensus 300 ~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d 336 (361)
T 3scy_A 300 GYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERD 336 (361)
T ss_dssp EEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEEC
T ss_pred eEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEE
Confidence 33443 344567777 7999887776 67899998777
No 152
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=98.13 E-value=1.2e-05 Score=82.36 Aligned_cols=103 Identities=10% Similarity=0.118 Sum_probs=73.6
Q ss_pred CCCCEEEEEeC--CCeEEEEECCCCe--EEEEeCCCCCCeEEEEEcCCCCEEEEEe-CC-cEEEEeCCC-Cee--EEEEe
Q 006939 1 MSGYFHFSGSA--DRTVKFWDLETFE--LIGSAGPETSGVRCLTFNPDGRTLLCGL-HE-SLKVFSWEP-IRC--HDAVD 71 (625)
Q Consensus 1 PdG~lLASGS~--D~tVkIWDL~tg~--~i~tl~~h~~~V~sv~fsPdg~~LvSgs-~D-sIrVWdl~s-g~~--i~t~~ 71 (625)
|||++++++.. ++.|.+||+.+++ .+..+..+...+..++|+|||++|++++ .+ .+.+|++.. +.. +..+.
T Consensus 49 pdg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~ 128 (347)
T 3hfq_A 49 AKDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQ 128 (347)
T ss_dssp TTCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEE
T ss_pred cCCeEEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceee
Confidence 68885444432 6899999998776 3455555677889999999999888877 45 899999963 332 22222
Q ss_pred cc---------CCceeEEEe-cCCCEEEEeeCCCeEEEEecc
Q 006939 72 VG---------WSRLSDLNV-HEGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 72 ~~---------~s~v~~l~~-~dg~lL~sg~~Dg~V~vWdv~ 103 (625)
.. ...+..+.+ ++++++++...++.|.+|+++
T Consensus 129 ~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~ 170 (347)
T 3hfq_A 129 HSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVS 170 (347)
T ss_dssp CCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEEC
T ss_pred cCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEEC
Confidence 11 123556777 788877777788899999987
No 153
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=98.11 E-value=3.2e-06 Score=95.97 Aligned_cols=100 Identities=12% Similarity=0.107 Sum_probs=77.4
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCeEEEEeCCCCC---CeEEEEEcCCCCEEEEEeC---------C-cEEEEeCCCCeeE
Q 006939 1 MSGYFHFSGSADRTVKFWDLETFELIGSAGPETS---GVRCLTFNPDGRTLLCGLH---------E-SLKVFSWEPIRCH 67 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~tg~~i~tl~~h~~---~V~sv~fsPdg~~LvSgs~---------D-sIrVWdl~sg~~i 67 (625)
|||++++++ .|++|++||+.++++...+.+|.. .+.+++|+|||++|+.++. + .|++||+.++++.
T Consensus 25 ~dg~~~~~~-~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~ 103 (719)
T 1z68_A 25 SGQEYLHQS-ADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFV 103 (719)
T ss_dssp SSSEEEEEC-TTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEEC
T ss_pred CCCeEEEEc-CCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccc
Confidence 688766655 699999999999998877776643 4899999999999987765 5 8999999998873
Q ss_pred EEEeccCCceeEEEe-cCCCEEEEeeCCCeEEEEecc
Q 006939 68 DAVDVGWSRLSDLNV-HEGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 68 ~t~~~~~s~v~~l~~-~dg~lL~sg~~Dg~V~vWdv~ 103 (625)
...... ..+..+.| ++|+.|+.+. ++.|++|++.
T Consensus 104 ~~~~l~-~~~~~~~~SPDG~~la~~~-~~~i~~~~~~ 138 (719)
T 1z68_A 104 RGNELP-RPIQYLCWSPVGSKLAYVY-QNNIYLKQRP 138 (719)
T ss_dssp CSSCCC-SSBCCEEECSSTTCEEEEE-TTEEEEESST
T ss_pred cceecC-cccccceECCCCCEEEEEE-CCeEEEEeCC
Confidence 111111 23555666 8999998886 5799999986
No 154
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=98.06 E-value=4.5e-05 Score=78.56 Aligned_cols=103 Identities=19% Similarity=0.250 Sum_probs=71.5
Q ss_pred CCCCEEEEE-eCCCeEEEEECCCCe-------E------EEEeCCCCCCeEEEEEcCCCCEEEEEe-CC-cEEEEeCCCC
Q 006939 1 MSGYFHFSG-SADRTVKFWDLETFE-------L------IGSAGPETSGVRCLTFNPDGRTLLCGL-HE-SLKVFSWEPI 64 (625)
Q Consensus 1 PdG~lLASG-S~D~tVkIWDL~tg~-------~------i~tl~~h~~~V~sv~fsPdg~~LvSgs-~D-sIrVWdl~sg 64 (625)
|||++|+.+ ..++.|.+|++.... + ......+...++.++|+|||++++.+. .+ .|.+|++.++
T Consensus 164 pdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g 243 (361)
T 3scy_A 164 PDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADG 243 (361)
T ss_dssp TTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETT
T ss_pred CCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCC
Confidence 789866554 458899999887533 2 122234456789999999999887666 45 8999999877
Q ss_pred eeEE--EEe---ccCCceeEEEe-cCCCEEEEeeC--CCeEEEEecc
Q 006939 65 RCHD--AVD---VGWSRLSDLNV-HEGKLLGCSYN--QSCVGVWVVD 103 (625)
Q Consensus 65 ~~i~--t~~---~~~s~v~~l~~-~dg~lL~sg~~--Dg~V~vWdv~ 103 (625)
.... .+. .+......+.+ ++|++|+++.. ++.|.+|+++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~ 290 (361)
T 3scy_A 244 MLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVD 290 (361)
T ss_dssp EEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEEC
T ss_pred ceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEc
Confidence 6532 222 22334567777 79998866554 4899999986
No 155
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=98.04 E-value=5.8e-05 Score=77.15 Aligned_cols=103 Identities=14% Similarity=0.198 Sum_probs=72.0
Q ss_pred CCCCEEE-EEeCCCeEEEEECCC--CeE--EEEeCCCC------CCeEEEEEcCCCCEEE-EEeCC-cEEEEeCCC-C--
Q 006939 1 MSGYFHF-SGSADRTVKFWDLET--FEL--IGSAGPET------SGVRCLTFNPDGRTLL-CGLHE-SLKVFSWEP-I-- 64 (625)
Q Consensus 1 PdG~lLA-SGS~D~tVkIWDL~t--g~~--i~tl~~h~------~~V~sv~fsPdg~~Lv-Sgs~D-sIrVWdl~s-g-- 64 (625)
|||++|+ ++..++.|.+|++.. ++. +..+.... ..+..++|+|||++|+ ++..+ .|.+|++.. +
T Consensus 196 pdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~ 275 (347)
T 3hfq_A 196 PDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHL 275 (347)
T ss_dssp TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCE
T ss_pred CCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcE
Confidence 7898554 456788999999874 553 23333222 3488999999999775 45545 899999973 2
Q ss_pred eeEEEEeccCCceeEEEe-cCCCEEEEeeC-CCeEEEEecc
Q 006939 65 RCHDAVDVGWSRLSDLNV-HEGKLLGCSYN-QSCVGVWVVD 103 (625)
Q Consensus 65 ~~i~t~~~~~s~v~~l~~-~dg~lL~sg~~-Dg~V~vWdv~ 103 (625)
..+..+..+...+..+.| +++++|+++.. ++.|.+|+++
T Consensus 276 ~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d 316 (347)
T 3hfq_A 276 TLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARD 316 (347)
T ss_dssp EEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred EEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEe
Confidence 444555554455677777 79988777665 4899999776
No 156
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=98.02 E-value=2e-05 Score=90.45 Aligned_cols=99 Identities=10% Similarity=0.047 Sum_probs=77.7
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCeEEEEeCCCCCC---e--EEEEEcCCCCEEEEEeCC----------cEEEEeCCCCe
Q 006939 1 MSGYFHFSGSADRTVKFWDLETFELIGSAGPETSG---V--RCLTFNPDGRTLLCGLHE----------SLKVFSWEPIR 65 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~tg~~i~tl~~h~~~---V--~sv~fsPdg~~LvSgs~D----------sIrVWdl~sg~ 65 (625)
|||++|+++ |++|++||+.++++...+.+|... + ..+.|+|||++|+.++.+ .+.+||+.+++
T Consensus 26 ~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~ 103 (740)
T 4a5s_A 26 SDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQ 103 (740)
T ss_dssp SSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTE
T ss_pred CCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCc
Confidence 689999997 999999999999998888877643 2 347899999998887763 45699999998
Q ss_pred eEEEEeccCCceeEEEe-cCCCEEEEeeCCCeEEEEecc
Q 006939 66 CHDAVDVGWSRLSDLNV-HEGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 66 ~i~t~~~~~s~v~~l~~-~dg~lL~sg~~Dg~V~vWdv~ 103 (625)
+.. +..+...+....| |+|+.|+.+. ++.|++|++.
T Consensus 104 ~~~-l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~ 140 (740)
T 4a5s_A 104 LIT-EERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEP 140 (740)
T ss_dssp ECC-SSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESST
T ss_pred EEE-cccCCCcceeeEECCCCCEEEEEE-CCeEEEEECC
Confidence 754 2233345666666 8999998875 5789999987
No 157
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.02 E-value=2.2e-05 Score=88.76 Aligned_cols=102 Identities=11% Similarity=0.002 Sum_probs=78.3
Q ss_pred CCCCEEEEEeCCCeEEEEECCC-----CeEEEEeCCCCCC--------------eEEEEEcCCCCEEEEEe---------
Q 006939 1 MSGYFHFSGSADRTVKFWDLET-----FELIGSAGPETSG--------------VRCLTFNPDGRTLLCGL--------- 52 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~t-----g~~i~tl~~h~~~--------------V~sv~fsPdg~~LvSgs--------- 52 (625)
|||++||.+ .|++|.+||+.+ ++.......+... +.++.|+|||++|+.++
T Consensus 130 pdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~ 208 (706)
T 2z3z_A 130 PVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPT 208 (706)
T ss_dssp TTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCE
T ss_pred CCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceE
Confidence 799999985 689999999998 8776554444333 48999999999998876
Q ss_pred ------------------------CC-cEEEEeCCCCeeEEEEe--ccCCceeEEEe-cCCCEEEEeeCCC-----eEEE
Q 006939 53 ------------------------HE-SLKVFSWEPIRCHDAVD--VGWSRLSDLNV-HEGKLLGCSYNQS-----CVGV 99 (625)
Q Consensus 53 ------------------------~D-sIrVWdl~sg~~i~t~~--~~~s~v~~l~~-~dg~lL~sg~~Dg-----~V~v 99 (625)
.+ .|++||+.+++...... .+...+..+.| ++|++|++++.++ .|.+
T Consensus 209 ~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~ 288 (706)
T 2z3z_A 209 PIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNA 288 (706)
T ss_dssp EEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEE
T ss_pred EeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEE
Confidence 34 79999999988755432 23345677777 7999888877665 8999
Q ss_pred Eecc
Q 006939 100 WVVD 103 (625)
Q Consensus 100 Wdv~ 103 (625)
||+.
T Consensus 289 ~d~~ 292 (706)
T 2z3z_A 289 YDAE 292 (706)
T ss_dssp EETT
T ss_pred EECC
Confidence 9986
No 158
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=98.01 E-value=1e-05 Score=91.90 Aligned_cols=93 Identities=16% Similarity=0.108 Sum_probs=68.7
Q ss_pred CCCCEEEEEeC---------CCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeCCcEEEEeCCCCeeEEEEe
Q 006939 1 MSGYFHFSGSA---------DRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFSWEPIRCHDAVD 71 (625)
Q Consensus 1 PdG~lLASGS~---------D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~DsIrVWdl~sg~~i~t~~ 71 (625)
|||++||.++. |++|++||+.+++.+.... ....+..++|+|||++|+.+..+.|++|++.++.+.....
T Consensus 69 pDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~-l~~~~~~~~~SPDG~~la~~~~~~i~~~~~~~g~~~~l~~ 147 (719)
T 1z68_A 69 PDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNE-LPRPIQYLCWSPVGSKLAYVYQNNIYLKQRPGDPPFQITF 147 (719)
T ss_dssp TTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSC-CCSSBCCEEECSSTTCEEEEETTEEEEESSTTSCCEECCC
T ss_pred CCCCeEEEEecCceeEEeecceEEEEEECCCCcccccee-cCcccccceECCCCCEEEEEECCeEEEEeCCCCCcEEEec
Confidence 79999999886 7899999999998731111 1356889999999999998876699999999887754321
Q ss_pred cc-CC-----------------ceeEEEe-cCCCEEEEeeCC
Q 006939 72 VG-WS-----------------RLSDLNV-HEGKLLGCSYNQ 94 (625)
Q Consensus 72 ~~-~s-----------------~v~~l~~-~dg~lL~sg~~D 94 (625)
.+ .. ....+.| ++|++|+.++.|
T Consensus 148 ~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d 189 (719)
T 1z68_A 148 NGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFN 189 (719)
T ss_dssp CCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEE
T ss_pred CCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEEC
Confidence 11 11 1135666 899999887654
No 159
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=97.99 E-value=7.3e-05 Score=77.84 Aligned_cols=93 Identities=15% Similarity=0.107 Sum_probs=68.0
Q ss_pred CCCeEEEEECC-CCeEEEEeC----CCCCCeEEEEEcCCCCEEEEEeC-C-cEEEEeCC-CCeeEE--EEec--cCCcee
Q 006939 11 ADRTVKFWDLE-TFELIGSAG----PETSGVRCLTFNPDGRTLLCGLH-E-SLKVFSWE-PIRCHD--AVDV--GWSRLS 78 (625)
Q Consensus 11 ~D~tVkIWDL~-tg~~i~tl~----~h~~~V~sv~fsPdg~~LvSgs~-D-sIrVWdl~-sg~~i~--t~~~--~~s~v~ 78 (625)
.++++.+|++. ++++...+. .+...+.+++|+|||++++++.. + .|++|++. +++... .+.. +.....
T Consensus 117 ~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~ 196 (365)
T 1jof_A 117 FAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPR 196 (365)
T ss_dssp SCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEE
T ss_pred CCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCC
Confidence 68999999997 466654433 25567999999999998887654 3 89999998 676532 2331 234467
Q ss_pred EEEe-cCCCEEEEee-CCCeEEEEecc
Q 006939 79 DLNV-HEGKLLGCSY-NQSCVGVWVVD 103 (625)
Q Consensus 79 ~l~~-~dg~lL~sg~-~Dg~V~vWdv~ 103 (625)
.+.| ++|++|+++. .++.|.+|+++
T Consensus 197 ~~~~spdg~~l~v~~~~~~~v~v~~~~ 223 (365)
T 1jof_A 197 WVAMHPTGNYLYALMEAGNRICEYVID 223 (365)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred EeEECCCCCEEEEEECCCCeEEEEEEe
Confidence 7777 7898886665 46899999876
No 160
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=97.96 E-value=0.00013 Score=73.50 Aligned_cols=66 Identities=12% Similarity=0.055 Sum_probs=52.7
Q ss_pred eEEEEEcC-CCCEEEEEeCCcEEEEeCCCCeeEEEEeccCCceeEEEe-cCCCEEEEeeCCCeEEEEecc
Q 006939 36 VRCLTFNP-DGRTLLCGLHESLKVFSWEPIRCHDAVDVGWSRLSDLNV-HEGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 36 V~sv~fsP-dg~~LvSgs~DsIrVWdl~sg~~i~t~~~~~s~v~~l~~-~dg~lL~sg~~Dg~V~vWdv~ 103 (625)
+..++|+| ||++++.+ .+.|.+||+.+++....+..+.. +..+.+ +++++|++++.++.|.+||+.
T Consensus 257 ~~~~~~sp~dg~~l~~~-~~~v~~~d~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~v~v~d~~ 324 (349)
T 1jmx_B 257 YFTGLRSPKDPNQIYGV-LNRLAKYDLKQRKLIKAANLDHT-YYCVAFDKKGDKLYLGGTFNDLAVFNPD 324 (349)
T ss_dssp EEEEEECSSCTTEEEEE-ESEEEEEETTTTEEEEEEECSSC-CCEEEECSSSSCEEEESBSSEEEEEETT
T ss_pred ceeeEecCCCCCEEEEE-cCeEEEEECccCeEEEEEcCCCC-ccceEECCCCCEEEEecCCCeEEEEecc
Confidence 45677889 99999888 44999999999998877765543 456666 688877778888999999987
No 161
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=97.91 E-value=4.6e-05 Score=86.06 Aligned_cols=93 Identities=15% Similarity=0.157 Sum_probs=68.4
Q ss_pred CCCeEEEEECCCCeEEEEe--CCCCCCeEEEEEcCCCCEEEEEeCC------cEEEEeCCCC-eeEEEEe---ccCC-ce
Q 006939 11 ADRTVKFWDLETFELIGSA--GPETSGVRCLTFNPDGRTLLCGLHE------SLKVFSWEPI-RCHDAVD---VGWS-RL 77 (625)
Q Consensus 11 ~D~tVkIWDL~tg~~i~tl--~~h~~~V~sv~fsPdg~~LvSgs~D------sIrVWdl~sg-~~i~t~~---~~~s-~v 77 (625)
.+..|.+||+.+++..... ..|...+.++.|+|||++|+.++.+ .|++||+.++ ....... ..|. .+
T Consensus 233 ~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~ 312 (706)
T 2z3z_A 233 HHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPL 312 (706)
T ss_dssp CEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCC
T ss_pred CeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECcc
Confidence 4568999999998875544 2566789999999999988875532 6999999998 4433221 1221 23
Q ss_pred eEEEe-c--CCCEEEEeeCCCeEEEEecc
Q 006939 78 SDLNV-H--EGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 78 ~~l~~-~--dg~lL~sg~~Dg~V~vWdv~ 103 (625)
..+.| + +|++++++..++.+++|+++
T Consensus 313 ~~~~~sp~~dg~~l~~~~~~g~~~l~~~~ 341 (706)
T 2z3z_A 313 HPLTFLPGSNNQFIWQSRRDGWNHLYLYD 341 (706)
T ss_dssp SCCEECTTCSSEEEEEECTTSSCEEEEEE
T ss_pred CCceeecCCCCEEEEEEccCCccEEEEEE
Confidence 45566 7 89999999999999999876
No 162
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=97.89 E-value=0.00015 Score=74.97 Aligned_cols=90 Identities=14% Similarity=-0.005 Sum_probs=68.6
Q ss_pred CCCCEEEEEeC-CCe--EEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCeeEEEEeccCCc
Q 006939 1 MSGYFHFSGSA-DRT--VKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVDVGWSR 76 (625)
Q Consensus 1 PdG~lLASGS~-D~t--VkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~i~t~~~~~s~ 76 (625)
|||+.|+.++. ++. |.+||+.+++......++...+..+.|+|||+.|+.+..+ .|++||+.+++.......+...
T Consensus 45 pDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~ 124 (388)
T 3pe7_A 45 RDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEW 124 (388)
T ss_dssp TTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTE
T ss_pred CCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhhc
Confidence 79999998887 663 8888999999887777776666677899999999988888 8999999998876655444333
Q ss_pred eeEE--E-ecCCCEEEE
Q 006939 77 LSDL--N-VHEGKLLGC 90 (625)
Q Consensus 77 v~~l--~-~~dg~lL~s 90 (625)
+... . .+++.+++.
T Consensus 125 ~~~~~~~~~~dg~~l~~ 141 (388)
T 3pe7_A 125 VGYGTWVANSDCTKLVG 141 (388)
T ss_dssp EEEEEEEECTTSSEEEE
T ss_pred ccccceeECCCCCeecc
Confidence 3222 2 267887764
No 163
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=97.87 E-value=5.3e-05 Score=83.88 Aligned_cols=95 Identities=13% Similarity=-0.052 Sum_probs=71.4
Q ss_pred CEEEEEeCCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeCC-----cEEEEeCCCCeeEEEEeccCCcee
Q 006939 4 YFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-----SLKVFSWEPIRCHDAVDVGWSRLS 78 (625)
Q Consensus 4 ~lLASGS~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~D-----sIrVWdl~sg~~i~t~~~~~s~v~ 78 (625)
.++++++.|+.+ +||+.++++......+. .++.|+|||+++++++.+ .|++||+.+++.. .+..+...+.
T Consensus 124 ~~~~s~~~~~~~-l~d~~~g~~~~l~~~~~---~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~-~l~~~~~~~~ 198 (582)
T 3o4h_A 124 VVFTGATEDRVA-LYALDGGGLRELARLPG---FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR-VFDSGEGSFS 198 (582)
T ss_dssp EEEEEECSSCEE-EEEEETTEEEEEEEESS---CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCE-EECCSSCEEE
T ss_pred EEEEecCCCCce-EEEccCCcEEEeecCCC---ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCce-EeecCCCccc
Confidence 355666666554 99999998765554433 789999999999965543 5999999988765 3444555567
Q ss_pred EEEe-cCCCEEEEeeCCC--eEEEEecc
Q 006939 79 DLNV-HEGKLLGCSYNQS--CVGVWVVD 103 (625)
Q Consensus 79 ~l~~-~dg~lL~sg~~Dg--~V~vWdv~ 103 (625)
...| ++|++|+++..++ .|++||++
T Consensus 199 ~~~~SpDG~~l~~~~~~~~~~i~~~d~~ 226 (582)
T 3o4h_A 199 SASISPGMKVTAGLETAREARLVTVDPR 226 (582)
T ss_dssp EEEECTTSCEEEEEECSSCEEEEEECTT
T ss_pred cceECCCCCEEEEccCCCeeEEEEEcCC
Confidence 7777 8999999888888 88888876
No 164
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=97.86 E-value=6.3e-05 Score=77.40 Aligned_cols=102 Identities=10% Similarity=0.125 Sum_probs=81.7
Q ss_pred CC-CCEEEEEeCCCeEEEEECCCCeEEEEe--CCCCCCeEEEEEcCCCCEEEEE-------eCC-cEEEEeCCCCeeEEE
Q 006939 1 MS-GYFHFSGSADRTVKFWDLETFELIGSA--GPETSGVRCLTFNPDGRTLLCG-------LHE-SLKVFSWEPIRCHDA 69 (625)
Q Consensus 1 Pd-G~lLASGS~D~tVkIWDL~tg~~i~tl--~~h~~~V~sv~fsPdg~~LvSg-------s~D-sIrVWdl~sg~~i~t 69 (625)
|+ |.++++...++.|++||..+|+++..+ ..+...+..++|+| +..+.+. ..+ .|++|+..+++.+..
T Consensus 205 ~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~ 283 (329)
T 3fvz_A 205 PHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP-GFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDV 283 (329)
T ss_dssp TTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET-TEEEEEECCCCTTCSCCCCEEEEETTTCCEEEE
T ss_pred CCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecC-CEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEE
Confidence 45 788899889999999999999998887 44667899999999 4333332 334 799999999998887
Q ss_pred Ee---ccCCceeEEEe-cCCCEEEEeeCCCeEEEEecc
Q 006939 70 VD---VGWSRLSDLNV-HEGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 70 ~~---~~~s~v~~l~~-~dg~lL~sg~~Dg~V~vWdv~ 103 (625)
+. .+......+.+ ++|.++++...++.|++|+++
T Consensus 284 ~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~ 321 (329)
T 3fvz_A 284 FKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLT 321 (329)
T ss_dssp ECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEE
T ss_pred EcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCC
Confidence 73 45666778888 788888888889999999987
No 165
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=97.78 E-value=0.0002 Score=72.57 Aligned_cols=100 Identities=12% Similarity=0.060 Sum_probs=79.6
Q ss_pred CCCEEEEEeCCCeEEEEECCCCeEEEEeCCCC-CCeEEEEEcCCCCEEEEEeCCcEEEEeCCCCeeEEEEecc-CCceeE
Q 006939 2 SGYFHFSGSADRTVKFWDLETFELIGSAGPET-SGVRCLTFNPDGRTLLCGLHESLKVFSWEPIRCHDAVDVG-WSRLSD 79 (625)
Q Consensus 2 dG~lLASGS~D~tVkIWDL~tg~~i~tl~~h~-~~V~sv~fsPdg~~LvSgs~DsIrVWdl~sg~~i~t~~~~-~s~v~~ 79 (625)
.+++|++++.|+.|.+||.++|+.+..+..+. ..++++.+.|+|+++++ ..+.|.+||. +|+.+..+..+ ...+..
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilvs-~~~~V~~~d~-~G~~~W~~~~~~~~~~~~ 81 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFS-YSKGAKMITR-DGRELWNIAAPAGCEMQT 81 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEEE-CBSEEEEECT-TSCEEEEEECCTTCEEEE
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEEe-CCCCEEEECC-CCCEEEEEcCCCCccccc
Confidence 46899999999999999999999999998776 57899999999999883 3348999999 78888877754 234555
Q ss_pred EEe-cCCCEEEEeeC-CCeEEEEecc
Q 006939 80 LNV-HEGKLLGCSYN-QSCVGVWVVD 103 (625)
Q Consensus 80 l~~-~dg~lL~sg~~-Dg~V~vWdv~ 103 (625)
..+ ++|+++++.+. ++.|..+|.+
T Consensus 82 ~~~~~dG~~lv~~~~~~~~v~~vd~~ 107 (276)
T 3no2_A 82 ARILPDGNALVAWCGHPSTILEVNMK 107 (276)
T ss_dssp EEECTTSCEEEEEESTTEEEEEECTT
T ss_pred cEECCCCCEEEEecCCCCEEEEEeCC
Confidence 555 79999988776 6666666544
No 166
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=97.78 E-value=0.00035 Score=69.33 Aligned_cols=100 Identities=16% Similarity=0.209 Sum_probs=75.6
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCeEEEEeCCC--CCCeEEEEEcCCCCEEEEEeCC--cEEEEeCCCCeeEEEEeccC--
Q 006939 1 MSGYFHFSGSADRTVKFWDLETFELIGSAGPE--TSGVRCLTFNPDGRTLLCGLHE--SLKVFSWEPIRCHDAVDVGW-- 74 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~tg~~i~tl~~h--~~~V~sv~fsPdg~~LvSgs~D--sIrVWdl~sg~~i~t~~~~~-- 74 (625)
|+|.++++.+.++.|.+||.. ++.+..+..+ ...+..++++++|.++++...+ .|.+|+.. ++.+..+..+.
T Consensus 173 ~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~-g~~~~~~~~~~~~ 250 (286)
T 1q7f_A 173 DKQEIFISDNRAHCVKVFNYE-GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQD-GQLISALESKVKH 250 (286)
T ss_dssp SSSEEEEEEGGGTEEEEEETT-CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTT-SCEEEEEEESSCC
T ss_pred CCCCEEEEECCCCEEEEEcCC-CCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCC-CCEEEEEcccCCC
Confidence 578888888889999999974 6677777544 3678999999999988887654 79999964 56665554432
Q ss_pred CceeEEEe-cCCCEEEEeeCCCeEEEEecc
Q 006939 75 SRLSDLNV-HEGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 75 s~v~~l~~-~dg~lL~sg~~Dg~V~vWdv~ 103 (625)
..+..+.+ ++|+++++ ..++.|++|++.
T Consensus 251 ~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~ 279 (286)
T 1q7f_A 251 AQCFDVALMDDGSVVLA-SKDYRLYIYRYV 279 (286)
T ss_dssp SCEEEEEEETTTEEEEE-ETTTEEEEEECS
T ss_pred CcceeEEECCCCcEEEE-CCCCeEEEEEcc
Confidence 33556777 68877777 568999999875
No 167
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=97.77 E-value=0.00039 Score=72.32 Aligned_cols=103 Identities=13% Similarity=0.124 Sum_probs=72.4
Q ss_pred CCCCEEEEEeC-CCeEEEEECC-CCeEE--EEeC--CCCCCeEEEEEcCCCCEEEEEeC-C-cEEEEeCC--CCeeE---
Q 006939 1 MSGYFHFSGSA-DRTVKFWDLE-TFELI--GSAG--PETSGVRCLTFNPDGRTLLCGLH-E-SLKVFSWE--PIRCH--- 67 (625)
Q Consensus 1 PdG~lLASGS~-D~tVkIWDL~-tg~~i--~tl~--~h~~~V~sv~fsPdg~~LvSgs~-D-sIrVWdl~--sg~~i--- 67 (625)
|||++|+++.. +..|.+||+. ++++. ..+. .|...++.++|+|||++++.+.. + .|.+|++. +++..
T Consensus 154 pdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~ 233 (365)
T 1jof_A 154 PTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTH 233 (365)
T ss_dssp TTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEE
T ss_pred CCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEcc
Confidence 78998887664 6799999998 77753 3343 34677999999999999887765 4 89999875 46542
Q ss_pred EEEe---ccC---C-------ceeEEE-e-cCCCEEEEeeCC-C-----eEEEEecc
Q 006939 68 DAVD---VGW---S-------RLSDLN-V-HEGKLLGCSYNQ-S-----CVGVWVVD 103 (625)
Q Consensus 68 ~t~~---~~~---s-------~v~~l~-~-~dg~lL~sg~~D-g-----~V~vWdv~ 103 (625)
..+. .++ . .+..+. + ++|++|.++..+ . .|.+|+++
T Consensus 234 ~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~ 290 (365)
T 1jof_A 234 HSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLR 290 (365)
T ss_dssp EEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEEC
T ss_pred ceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEEC
Confidence 1221 111 1 366777 7 799988665432 2 89999986
No 168
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=97.71 E-value=0.00016 Score=75.81 Aligned_cols=100 Identities=11% Similarity=0.204 Sum_probs=76.5
Q ss_pred CCCEEEEEe------CCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeC----------C-cEEEEeCCCC
Q 006939 2 SGYFHFSGS------ADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLH----------E-SLKVFSWEPI 64 (625)
Q Consensus 2 dG~lLASGS------~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~----------D-sIrVWdl~sg 64 (625)
+++++.... .|++|.+||..+++.+..+..+..+ .++|+|||++++.+.. + +|.+||..++
T Consensus 14 ~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~ 91 (361)
T 2oiz_A 14 QENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKL 91 (361)
T ss_dssp GGGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTC
T ss_pred CCCEEEEECCCCCccccCeEEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCC
Confidence 556665543 3789999999999998888766544 8999999999987752 3 7999999998
Q ss_pred eeEEEEecc------CCceeEEEe-cCCCEEEEeeC--CCeEEEEecc
Q 006939 65 RCHDAVDVG------WSRLSDLNV-HEGKLLGCSYN--QSCVGVWVVD 103 (625)
Q Consensus 65 ~~i~t~~~~------~s~v~~l~~-~dg~lL~sg~~--Dg~V~vWdv~ 103 (625)
+.+..+... ......+.+ ++|++|.++.. ++.|.+||+.
T Consensus 92 ~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~ 139 (361)
T 2oiz_A 92 TFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVA 139 (361)
T ss_dssp CEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETT
T ss_pred cEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECC
Confidence 888777543 123445666 79998877653 5799999987
No 169
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=97.64 E-value=0.00016 Score=80.99 Aligned_cols=102 Identities=13% Similarity=0.027 Sum_probs=74.8
Q ss_pred CCCCEEEEEeCC----------CeEEEEECCC------CeEEEEeC-CCCCCeEEEEEcCCCCEEEEEeC--------C-
Q 006939 1 MSGYFHFSGSAD----------RTVKFWDLET------FELIGSAG-PETSGVRCLTFNPDGRTLLCGLH--------E- 54 (625)
Q Consensus 1 PdG~lLASGS~D----------~tVkIWDL~t------g~~i~tl~-~h~~~V~sv~fsPdg~~LvSgs~--------D- 54 (625)
|||+.|+.++.| .+|.+||+.+ ++.. .+. .+...+..+.|+|||++|+.++. .
T Consensus 139 pDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~ 217 (662)
T 3azo_A 139 PERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVR-ELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGT 217 (662)
T ss_dssp TTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSE-ESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCE
T ss_pred CCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCcee-EEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCc
Confidence 799999999887 5899999998 5543 444 55577888999999999886552 2
Q ss_pred cEEEEeCC-CC---eeEEEEeccCCceeEEEe-cCCCEEEEeeCCCeEEEEecc
Q 006939 55 SLKVFSWE-PI---RCHDAVDVGWSRLSDLNV-HEGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 55 sIrVWdl~-sg---~~i~t~~~~~s~v~~l~~-~dg~lL~sg~~Dg~V~vWdv~ 103 (625)
.|++||+. ++ ........+...+..+.| ++|++++++..++...+|.++
T Consensus 218 ~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~ 271 (662)
T 3azo_A 218 ELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVD 271 (662)
T ss_dssp EEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEEC
T ss_pred EEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEE
Confidence 69999999 57 444433333455667777 789988888888855555554
No 170
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=97.64 E-value=0.00086 Score=66.48 Aligned_cols=101 Identities=12% Similarity=0.137 Sum_probs=77.0
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCeEEEEeC--CCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCeeEEEEecc--CC
Q 006939 1 MSGYFHFSGSADRTVKFWDLETFELIGSAG--PETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVDVG--WS 75 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~tg~~i~tl~--~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~i~t~~~~--~s 75 (625)
|+|.++++...++.|.+||.. ++.+..+. .+...+..++|+++|.++++...+ .|++|+.. +..+..+... ..
T Consensus 130 ~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~g~~~ 207 (286)
T 1q7f_A 130 NKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYE-GQYLRQIGGEGITN 207 (286)
T ss_dssp TTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETT-CCEEEEESCTTTSC
T ss_pred CCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCC-CCEEEEEccCCccC
Confidence 578888888888999999964 66666653 455678999999999988877666 89999975 4555555322 34
Q ss_pred ceeEEEe-cCCCEEEEeeCCC-eEEEEecc
Q 006939 76 RLSDLNV-HEGKLLGCSYNQS-CVGVWVVD 103 (625)
Q Consensus 76 ~v~~l~~-~dg~lL~sg~~Dg-~V~vWdv~ 103 (625)
....+.+ ++|.++++...++ .|.+|+.+
T Consensus 208 ~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~ 237 (286)
T 1q7f_A 208 YPIGVGINSNGEILIADNHNNFNLTIFTQD 237 (286)
T ss_dssp SEEEEEECTTCCEEEEECSSSCEEEEECTT
T ss_pred CCcEEEECCCCCEEEEeCCCCEEEEEECCC
Confidence 5677777 6888888887776 99999865
No 171
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=97.64 E-value=0.00029 Score=78.86 Aligned_cols=102 Identities=11% Similarity=0.059 Sum_probs=73.5
Q ss_pred CCCCEEEEEeCCC--------eEEEEECC-CC---eEEEEeCCCCCCeEEEEEcCCCCEEEEEeCC---cEEEEeCCCCe
Q 006939 1 MSGYFHFSGSADR--------TVKFWDLE-TF---ELIGSAGPETSGVRCLTFNPDGRTLLCGLHE---SLKVFSWEPIR 65 (625)
Q Consensus 1 PdG~lLASGS~D~--------tVkIWDL~-tg---~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~D---sIrVWdl~sg~ 65 (625)
|||++|+.++.++ .|.+||+. ++ +......+|...+..+.|+|||++++++..+ .|.+||+.+++
T Consensus 197 pDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~ 276 (662)
T 3azo_A 197 PDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGA 276 (662)
T ss_dssp TTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCC
T ss_pred CCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCc
Confidence 7999999887553 79999999 57 5544455667889999999999987777765 46666665666
Q ss_pred eEEEEecc-------CCc-eeEEEe-cCCCEEEEeeCCCeEEEEecc
Q 006939 66 CHDAVDVG-------WSR-LSDLNV-HEGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 66 ~i~t~~~~-------~s~-v~~l~~-~dg~lL~sg~~Dg~V~vWdv~ 103 (625)
.......+ |.. +..+.+ +++++++++.. +.+++|.++
T Consensus 277 ~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d 322 (662)
T 3azo_A 277 ATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILD 322 (662)
T ss_dssp EEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEE
T ss_pred eeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEE
Confidence 54433222 221 344555 68889988888 999999665
No 172
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=97.58 E-value=0.00083 Score=68.91 Aligned_cols=103 Identities=13% Similarity=0.065 Sum_probs=79.6
Q ss_pred CCCCEEEEEeCC------------------------CeEEEEECCCCeEEEEeC-CCCCCeEEEEEcCCCCEEEEEeCC-
Q 006939 1 MSGYFHFSGSAD------------------------RTVKFWDLETFELIGSAG-PETSGVRCLTFNPDGRTLLCGLHE- 54 (625)
Q Consensus 1 PdG~lLASGS~D------------------------~tVkIWDL~tg~~i~tl~-~h~~~V~sv~fsPdg~~LvSgs~D- 54 (625)
|+|+++++.+.+ ++|.+||..+++.+..+. ++......++|+|+|+++++...+
T Consensus 33 ~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~l~v~d~~~~ 112 (329)
T 3fvz_A 33 SKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGNYWVTDVALH 112 (329)
T ss_dssp TTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSCEEEEETTTT
T ss_pred CCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCCCEEEEECCCC
Confidence 689999998877 479999999999887765 455688999999999988887776
Q ss_pred cEEEEeCCCCe-eEEEEe---------ccCCceeEEEe-c-CCCEEEEee-CCCeEEEEecc
Q 006939 55 SLKVFSWEPIR-CHDAVD---------VGWSRLSDLNV-H-EGKLLGCSY-NQSCVGVWVVD 103 (625)
Q Consensus 55 sIrVWdl~sg~-~i~t~~---------~~~s~v~~l~~-~-dg~lL~sg~-~Dg~V~vWdv~ 103 (625)
.|++|+..... .+..+. .+......+.+ + ++.++++.+ .++.|++|+.+
T Consensus 113 ~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~ 174 (329)
T 3fvz_A 113 QVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPS 174 (329)
T ss_dssp EEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTT
T ss_pred EEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCC
Confidence 89999986542 344441 23345677887 5 788888885 68999999865
No 173
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=97.58 E-value=0.00015 Score=83.11 Aligned_cols=102 Identities=16% Similarity=0.098 Sum_probs=74.9
Q ss_pred CCCCEEEEEeCC---------CeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeCCcEEEEeCCCCeeEEEEe
Q 006939 1 MSGYFHFSGSAD---------RTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFSWEPIRCHDAVD 71 (625)
Q Consensus 1 PdG~lLASGS~D---------~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~DsIrVWdl~sg~~i~t~~ 71 (625)
|||++|+.++.+ +.+.+||+.++++. .+..|...+....|+|||+.|+.+..+.|.+|++.++.+.+.-.
T Consensus 71 pdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~~~~~~~lt~ 149 (740)
T 4a5s_A 71 PDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLI-TEERIPNNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSYRITW 149 (740)
T ss_dssp TTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEEC-CSSCCCTTEEEEEECSSTTCEEEEETTEEEEESSTTSCCEECCS
T ss_pred CCCCEEEEEECCeeeEEEccceEEEEEECCCCcEE-EcccCCCcceeeEECCCCCEEEEEECCeEEEEECCCCceEEEcC
Confidence 799999999887 44569999999864 46777788999999999999988876699999998877654221
Q ss_pred -ccCC-----------------ceeEEEe-cCCCEEEEeeC-CCeEEEEecc
Q 006939 72 -VGWS-----------------RLSDLNV-HEGKLLGCSYN-QSCVGVWVVD 103 (625)
Q Consensus 72 -~~~s-----------------~v~~l~~-~dg~lL~sg~~-Dg~V~vWdv~ 103 (625)
.+.. ....+.| +||+.|+.... ++.|.+|++.
T Consensus 150 ~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~ 201 (740)
T 4a5s_A 150 TGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYS 201 (740)
T ss_dssp CCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEE
T ss_pred CCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEE
Confidence 1111 1122455 89998877654 4457777764
No 174
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=97.51 E-value=0.0012 Score=66.91 Aligned_cols=93 Identities=13% Similarity=0.159 Sum_probs=70.3
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeCC-----cEEEEeCCCCeeEEEEe--cc
Q 006939 1 MSGYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-----SLKVFSWEPIRCHDAVD--VG 73 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~D-----sIrVWdl~sg~~i~t~~--~~ 73 (625)
|+|.+++++..++.|.+||..+++.......+...+.+++|+++|++++++..+ .|.+||..++.....+. ..
T Consensus 54 ~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~ 133 (333)
T 2dg1_A 54 RQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLST 133 (333)
T ss_dssp TTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSS
T ss_pred CCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCcc
Confidence 578988899999999999999888765554566789999999999988876654 79999998876543332 12
Q ss_pred CCceeEEEe-cCCCEEEEeeC
Q 006939 74 WSRLSDLNV-HEGKLLGCSYN 93 (625)
Q Consensus 74 ~s~v~~l~~-~dg~lL~sg~~ 93 (625)
...+.++.+ ++++++++...
T Consensus 134 ~~~~~~i~~d~~g~l~v~~~~ 154 (333)
T 2dg1_A 134 AYCIDDMVFDSKGGFYFTDFR 154 (333)
T ss_dssp CCCEEEEEECTTSCEEEEECC
T ss_pred CCcccceEECCCCCEEEEecc
Confidence 345677777 68888776653
No 175
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=97.50 E-value=0.00043 Score=78.94 Aligned_cols=102 Identities=11% Similarity=0.153 Sum_probs=71.7
Q ss_pred CCCCEEEEEeCCC-----eEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeCC-c----------------EEE
Q 006939 1 MSGYFHFSGSADR-----TVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-S----------------LKV 58 (625)
Q Consensus 1 PdG~lLASGS~D~-----tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~D-s----------------IrV 58 (625)
|||++||.++.++ +|++||+.+++.+.....+ ..+..+.|+|||+.|+.+..+ . |++
T Consensus 134 PDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~ 212 (710)
T 2xdw_A 134 EDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYY 212 (710)
T ss_dssp TTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEE
T ss_pred CCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC-cccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEE
Confidence 7999998776544 8999999999976543222 236779999999998877665 5 999
Q ss_pred EeCCCCeeE--EEEec--cCCceeEEEe-cCCCEEEEeeC-----CCeEEEEecc
Q 006939 59 FSWEPIRCH--DAVDV--GWSRLSDLNV-HEGKLLGCSYN-----QSCVGVWVVD 103 (625)
Q Consensus 59 Wdl~sg~~i--~t~~~--~~s~v~~l~~-~dg~lL~sg~~-----Dg~V~vWdv~ 103 (625)
|++.++... ..+.. +......+.+ ++|++|+.+.. +..|.+||+.
T Consensus 213 ~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~ 267 (710)
T 2xdw_A 213 HVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQ 267 (710)
T ss_dssp EETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGG
T ss_pred EECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECc
Confidence 999887632 22222 1222445555 79998876654 5688888876
No 176
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=97.49 E-value=0.00063 Score=71.33 Aligned_cols=71 Identities=8% Similarity=0.063 Sum_probs=56.9
Q ss_pred CCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeCCcEEEEeCCCC--eeEEEE-eccCCceeEEEe-cCC
Q 006939 12 DRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFSWEPI--RCHDAV-DVGWSRLSDLNV-HEG 85 (625)
Q Consensus 12 D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~DsIrVWdl~sg--~~i~t~-~~~~s~v~~l~~-~dg 85 (625)
..+|.+||+.+++.+.++..+. +..++|+|||++|+++..++|.|||..++ +.+..+ ..+.. ...+.+ ++|
T Consensus 285 ~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~~~v~v~D~~t~~l~~~~~i~~~G~~-P~~~~~~p~G 359 (361)
T 2oiz_A 285 AAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDGGNVNVYDISQPEPKLLRTIEGAAEA-SLQVQFHPVG 359 (361)
T ss_dssp CSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECSSCEEEEECSSSSCEEEEEETTSCSS-EEEEEECCCS
T ss_pred CceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCCCeEEEEECCCCcceeeEEeccCCCC-cEEEEecCCC
Confidence 3489999999999999998876 99999999999998877679999999999 888876 33333 334444 454
No 177
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=97.47 E-value=0.0013 Score=73.80 Aligned_cols=100 Identities=12% Similarity=0.124 Sum_probs=79.4
Q ss_pred CCCEEEEEeCCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCC--CCeeEEEEeccCCcee
Q 006939 2 SGYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWE--PIRCHDAVDVGWSRLS 78 (625)
Q Consensus 2 dG~lLASGS~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~--sg~~i~t~~~~~s~v~ 78 (625)
++.++++...+++|.+||..+++.+..+... ..+..+.|+|||++++.++.+ .|.+||+. +++.+..+..+..+ .
T Consensus 166 ~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g-~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~P-~ 243 (567)
T 1qks_A 166 ENLFSVTLRDAGQIALIDGSTYEIKTVLDTG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEA-R 243 (567)
T ss_dssp GGEEEEEETTTTEEEEEETTTCCEEEEEECS-SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEE-E
T ss_pred CceEEEEeCCCCeEEEEECCCCeEEEEEeCC-CCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCCC-c
Confidence 3467788889999999999999999887643 467799999999999988888 99999995 77777777665543 4
Q ss_pred EEEec-----CCCEE-EEeeCCCeEEEEecc
Q 006939 79 DLNVH-----EGKLL-GCSYNQSCVGVWVVD 103 (625)
Q Consensus 79 ~l~~~-----dg~lL-~sg~~Dg~V~vWdv~ 103 (625)
.+.+. +|+++ ++...++.|.+||..
T Consensus 244 ~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~ 274 (567)
T 1qks_A 244 SIETSKMEGWEDKYAIAGAYWPPQYVIMDGE 274 (567)
T ss_dssp EEEECCSTTCTTTEEEEEEEETTEEEEEETT
T ss_pred eeEEccccCCCCCEEEEEEccCCeEEEEECC
Confidence 55554 88877 455666999999976
No 178
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=97.47 E-value=0.00038 Score=79.24 Aligned_cols=99 Identities=10% Similarity=0.031 Sum_probs=67.4
Q ss_pred CCCCEEE-----EEeCCCeEEEEECCCCeEEEEeCCCCCCe--EEEEEcCCCCEEEEEeCC-c-------------EEEE
Q 006939 1 MSGYFHF-----SGSADRTVKFWDLETFELIGSAGPETSGV--RCLTFNPDGRTLLCGLHE-S-------------LKVF 59 (625)
Q Consensus 1 PdG~lLA-----SGS~D~tVkIWDL~tg~~i~tl~~h~~~V--~sv~fsPdg~~LvSgs~D-s-------------IrVW 59 (625)
|||++|| +|+.+.+|++||+.+++.+. ..+...+ ..++|+|||+.|+.++.+ . |++|
T Consensus 130 PDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~--~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~ 207 (695)
T 2bkl_A 130 WDGKKVAFAQKPNAADEAVLHVIDVDSGEWSK--VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYH 207 (695)
T ss_dssp TTSSEEEEEEEETTCSCCEEEEEETTTCCBCS--SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEE
T ss_pred CCCCEEEEEECCCCCceEEEEEEECCCCCCcC--CcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEE
Confidence 7999998 66677899999999998641 1122222 678999999999887775 5 9999
Q ss_pred eCCCCeeE--EEEe--ccCCceeEEEe-cCCCEEEEeeCCC----eEEEEe
Q 006939 60 SWEPIRCH--DAVD--VGWSRLSDLNV-HEGKLLGCSYNQS----CVGVWV 101 (625)
Q Consensus 60 dl~sg~~i--~t~~--~~~s~v~~l~~-~dg~lL~sg~~Dg----~V~vWd 101 (625)
++.++... .++. .+...+..+.+ ++|++|+.+..++ .|.+|+
T Consensus 208 ~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~ 258 (695)
T 2bkl_A 208 TLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKR 258 (695)
T ss_dssp ETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEEC
T ss_pred ECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEc
Confidence 99887632 2222 22234455555 7888887665544 455553
No 179
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=97.44 E-value=0.0012 Score=64.42 Aligned_cols=103 Identities=8% Similarity=-0.021 Sum_probs=77.9
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCeeEEEEeccCCceeE
Q 006939 1 MSGYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVDVGWSRLSD 79 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~i~t~~~~~s~v~~ 79 (625)
|+|+++++...++.|.+||...+........+...+..+++.++|.++++...+ .|.+|+............+...+..
T Consensus 159 ~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~ 238 (270)
T 1rwi_B 159 NSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLA 238 (270)
T ss_dssp TTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEE
T ss_pred CCCCEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCcee
Confidence 578888888778899999998776554444444678999999999877776656 8999998765443322233355677
Q ss_pred EEe-cCCCEEEEeeCCCeEEEEecc
Q 006939 80 LNV-HEGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 80 l~~-~dg~lL~sg~~Dg~V~vWdv~ 103 (625)
+.+ ++|.++++...++.|.+|+..
T Consensus 239 i~~~~~g~l~v~~~~~~~v~~~~~~ 263 (270)
T 1rwi_B 239 VAVDSDRTVYVADRGNDRVVKLTSL 263 (270)
T ss_dssp EEECTTCCEEEEEGGGTEEEEECCC
T ss_pred EEECCCCCEEEEECCCCEEEEEcCC
Confidence 777 688888898889999999877
No 180
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=97.30 E-value=0.0016 Score=66.05 Aligned_cols=98 Identities=17% Similarity=0.161 Sum_probs=67.7
Q ss_pred CCCCEEEEEeCC---C--eEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeC----------------------
Q 006939 1 MSGYFHFSGSAD---R--TVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLH---------------------- 53 (625)
Q Consensus 1 PdG~lLASGS~D---~--tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~---------------------- 53 (625)
|||++||.++.+ + .|.+||+.+++.......+ . +..+.|+|||+.|+.++.
T Consensus 68 pDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~-~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~ 145 (347)
T 2gop_A 68 PDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAK-N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLG 145 (347)
T ss_dssp TTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEES-E-EEEEEECTTSSEEEEEEECCCC---------CCCC-----
T ss_pred CCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCC-C-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcc
Confidence 799999887754 3 3778899888866554443 3 999999999998876542
Q ss_pred -----C-cEEEEeCCCCeeEEEEeccCCceeEEEe-cCCCEEEEeeCCC-------eEEEEecc
Q 006939 54 -----E-SLKVFSWEPIRCHDAVDVGWSRLSDLNV-HEGKLLGCSYNQS-------CVGVWVVD 103 (625)
Q Consensus 54 -----D-sIrVWdl~sg~~i~t~~~~~s~v~~l~~-~dg~lL~sg~~Dg-------~V~vWdv~ 103 (625)
. .|.+||+.+++.+..+... .+..+.+ ++| +++++..+. ...+|.++
T Consensus 146 ~~~~~~~~l~~~d~~~~~~~~~l~~~--~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d 206 (347)
T 2gop_A 146 FFDGEKTTFWIFDTESEEVIEEFEKP--RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE 206 (347)
T ss_dssp ----CEEEEEEEETTTTEEEEEEEEE--TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE
T ss_pred cccCccceEEEEECCCCeEEeeecCC--CcccccCCCCe-EEEEEecccccccccccccEEEeC
Confidence 2 6899999988874434332 4556666 778 777665542 45666554
No 181
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=97.24 E-value=0.0026 Score=65.37 Aligned_cols=101 Identities=9% Similarity=0.077 Sum_probs=76.4
Q ss_pred CCCEEEEEeCCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCeeEEEEeccC-----C
Q 006939 2 SGYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVDVGW-----S 75 (625)
Q Consensus 2 dG~lLASGS~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~i~t~~~~~-----s 75 (625)
+++++++...+++|.+||..+++.+.++.. ......++|++++.++++...+ .|.+||..+++....+..+. .
T Consensus 53 ~~~lyv~~~~~~~v~viD~~t~~~~~~i~~-~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~ 131 (328)
T 3dsm_A 53 DGIGWIVVNNSHVIFAIDINTFKEVGRITG-FTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESG 131 (328)
T ss_dssp TTEEEEEEGGGTEEEEEETTTCCEEEEEEC-CSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTC
T ss_pred CCEEEEEEcCCCEEEEEECcccEEEEEcCC-CCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCC
Confidence 355667777789999999999999888853 4678999999999666665456 99999999999887776554 1
Q ss_pred ceeEEEecCCCEEEEee-CCCeEEEEecc
Q 006939 76 RLSDLNVHEGKLLGCSY-NQSCVGVWVVD 103 (625)
Q Consensus 76 ~v~~l~~~dg~lL~sg~-~Dg~V~vWdv~ 103 (625)
....+.+.+++++++.. .++.|.+||..
T Consensus 132 ~p~~i~~~~~~lyv~~~~~~~~v~viD~~ 160 (328)
T 3dsm_A 132 STEQMVQYGKYVYVNCWSYQNRILKIDTE 160 (328)
T ss_dssp BCCCEEEETTEEEEEECTTCCEEEEEETT
T ss_pred CcceEEEECCEEEEEcCCCCCEEEEEECC
Confidence 33455555666666655 47899999987
No 182
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=97.22 E-value=0.0013 Score=70.58 Aligned_cols=93 Identities=11% Similarity=0.049 Sum_probs=72.1
Q ss_pred CCCEEEEEeCCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCeeEEEEeccCCceeEE
Q 006939 2 SGYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVDVGWSRLSDL 80 (625)
Q Consensus 2 dG~lLASGS~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~i~t~~~~~s~v~~l 80 (625)
||.+|+.+ .++.|++||+.+.........|...+.++.+.+.. ++.+..| .|.+||+..+..... ...+.++
T Consensus 96 d~~~L~v~-~~~~l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p~--~av~~~dG~L~v~dl~~~~~~~~----~~~Vs~v 168 (388)
T 1xip_A 96 HGDQVLVS-TRNALYSLDLEELSEFRTVTSFEKPVFQLKNVNNT--LVILNSVNDLSALDLRTKSTKQL----AQNVTSF 168 (388)
T ss_dssp ETTEEEEE-ESSEEEEEESSSTTCEEEEEECSSCEEEEEECSSE--EEEEETTSEEEEEETTTCCEEEE----EESEEEE
T ss_pred CCCEEEEE-cCCcEEEEEchhhhccCccceeecceeeEEecCCC--EEEEECCCCEEEEEccCCccccc----cCCceEE
Confidence 57888888 88999999998777666666777788888776543 6666667 999999998776542 2357788
Q ss_pred Ee-cCCCEEEEeeCCCeEEEEecc
Q 006939 81 NV-HEGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 81 ~~-~dg~lL~sg~~Dg~V~vWdv~ 103 (625)
+| ++| ++.|..||.+++|+.+
T Consensus 169 ~WSpkG--~~vg~~dg~i~~~~~~ 190 (388)
T 1xip_A 169 DVTNSQ--LAVLLKDRSFQSFAWR 190 (388)
T ss_dssp EECSSE--EEEEETTSCEEEEEEE
T ss_pred EEcCCc--eEEEEcCCcEEEEcCC
Confidence 88 566 6778899999999877
No 183
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=97.21 E-value=0.0033 Score=62.59 Aligned_cols=103 Identities=13% Similarity=0.184 Sum_probs=74.7
Q ss_pred CCCCE-EEEEeCCCeEEEEECC-CCe-----EEEEeCCCC-CCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCeeEEEEe
Q 006939 1 MSGYF-HFSGSADRTVKFWDLE-TFE-----LIGSAGPET-SGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVD 71 (625)
Q Consensus 1 PdG~l-LASGS~D~tVkIWDL~-tg~-----~i~tl~~h~-~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~i~t~~ 71 (625)
|+|+. +++...++.|.+||+. ++. .+..+.++. ..+..+++.++|.++++...+ .|.+||..+++....+.
T Consensus 185 ~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~ 264 (314)
T 1pjx_A 185 GRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIR 264 (314)
T ss_dssp SCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEE
T ss_pred CCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEe
Confidence 46644 4555678899999986 454 233445444 567899999999988887666 89999998777766666
Q ss_pred ccCCceeEEEe-cCCC-EEEEeeCCCeEEEEecc
Q 006939 72 VGWSRLSDLNV-HEGK-LLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 72 ~~~s~v~~l~~-~dg~-lL~sg~~Dg~V~vWdv~ 103 (625)
.+...+..+.+ +++. ++++...++.|..|++.
T Consensus 265 ~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~ 298 (314)
T 1pjx_A 265 CPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQ 298 (314)
T ss_dssp CSSSCEEEEEECTTSSEEEEEETTTTEEEEEECS
T ss_pred CCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCC
Confidence 55566777877 6788 55666666789888876
No 184
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=97.12 E-value=0.0029 Score=63.16 Aligned_cols=88 Identities=13% Similarity=0.084 Sum_probs=67.2
Q ss_pred CCCC-EEEEEeCCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCeeEEEEec----cC
Q 006939 1 MSGY-FHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVDV----GW 74 (625)
Q Consensus 1 PdG~-lLASGS~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~i~t~~~----~~ 74 (625)
|+|+ +++++..++.|..||..++ +..+..+...+.+++|+++|.++++...+ .|.+||..+++....... ..
T Consensus 37 ~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~ 114 (296)
T 3e5z_A 37 PARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWESIADSFEGKKL 114 (296)
T ss_dssp GGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEEECEETTEEC
T ss_pred CCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCC
Confidence 5677 8889999999999999977 56666677889999999999988877665 899999988876543321 12
Q ss_pred CceeEEEe-cCCCEEEE
Q 006939 75 SRLSDLNV-HEGKLLGC 90 (625)
Q Consensus 75 s~v~~l~~-~dg~lL~s 90 (625)
..+.++.+ ++|+++++
T Consensus 115 ~~~~~i~~d~~G~l~vt 131 (296)
T 3e5z_A 115 NSPNDVCLAPDGSLWFS 131 (296)
T ss_dssp CCCCCEEECTTSCEEEE
T ss_pred CCCCCEEECCCCCEEEE
Confidence 33456666 68888886
No 185
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=97.10 E-value=0.0044 Score=62.60 Aligned_cols=101 Identities=12% Similarity=0.092 Sum_probs=76.8
Q ss_pred CCCCEEEEEeC-CCeEEEEECCCCeEEEEeC------CCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCeeEEEEec
Q 006939 1 MSGYFHFSGSA-DRTVKFWDLETFELIGSAG------PETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVDV 72 (625)
Q Consensus 1 PdG~lLASGS~-D~tVkIWDL~tg~~i~tl~------~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~i~t~~~ 72 (625)
|||+++++.+. ++.|..+|. +|+.+..+. .+....+.+.+.++|.++++...+ .|.+||.. |+.+..+..
T Consensus 86 ~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~ 163 (276)
T 3no2_A 86 PDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNSVKL 163 (276)
T ss_dssp TTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEEEEEC
T ss_pred CCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCEEEEEEC
Confidence 68999999887 777877886 688776653 222345567789999999998877 99999998 998888876
Q ss_pred cCCceeEEEecCCCEEEEeeCCCeEEEEecc
Q 006939 73 GWSRLSDLNVHEGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 73 ~~s~v~~l~~~dg~lL~sg~~Dg~V~vWdv~ 103 (625)
+.........+++.+++++..++.|..||.+
T Consensus 164 ~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~ 194 (276)
T 3no2_A 164 SGTPFSSAFLDNGDCLVACGDAHCFVQLNLE 194 (276)
T ss_dssp SSCCCEEEECTTSCEEEECBTTSEEEEECTT
T ss_pred CCCccceeEcCCCCEEEEeCCCCeEEEEeCc
Confidence 5433333334789999988888889998876
No 186
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=97.10 E-value=0.0044 Score=61.78 Aligned_cols=91 Identities=18% Similarity=0.087 Sum_probs=68.3
Q ss_pred CCCCEEEEEeCCCeEEEEECC-CCeE---EEEeCCCCCCeEEEEEcCCCCEEEEEeCCcEEEEeCCCCeeEEEEeccCCc
Q 006939 1 MSGYFHFSGSADRTVKFWDLE-TFEL---IGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFSWEPIRCHDAVDVGWSR 76 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~-tg~~---i~tl~~h~~~V~sv~fsPdg~~LvSgs~DsIrVWdl~sg~~i~t~~~~~s~ 76 (625)
|||++|++.+.++.|.+||+. ++.+ ...+..+...+..++|.++|+++++. .+.|.+|+.. ++.+..+..+..
T Consensus 181 ~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~-~~~v~~~~~~-g~~~~~~~~~~~- 257 (296)
T 3e5z_A 181 PSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA-GDGVHVLTPD-GDELGRVLTPQT- 257 (296)
T ss_dssp TTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE-TTEEEEECTT-SCEEEEEECSSC-
T ss_pred CCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc-CCeEEEECCC-CCEEEEEECCCC-
Confidence 688888888888999999986 5554 33344455667889999999987776 4489999987 777777766555
Q ss_pred eeEEEe--cCCCEEEEeeCC
Q 006939 77 LSDLNV--HEGKLLGCSYNQ 94 (625)
Q Consensus 77 v~~l~~--~dg~lL~sg~~D 94 (625)
+..+.| ++++.|..+..+
T Consensus 258 ~~~~~f~~~d~~~L~v~t~~ 277 (296)
T 3e5z_A 258 TSNLCFGGPEGRTLYMTVST 277 (296)
T ss_dssp CCEEEEESTTSCEEEEEETT
T ss_pred ceeEEEECCCCCEEEEEcCC
Confidence 667766 577777777765
No 187
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=97.06 E-value=0.0032 Score=61.36 Aligned_cols=103 Identities=8% Similarity=-0.054 Sum_probs=74.7
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCeeEEEEeccCCceeE
Q 006939 1 MSGYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVDVGWSRLSD 79 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~i~t~~~~~s~v~~ 79 (625)
|+|.++++...++.|.+||..+.............+..+++.++|+++++...+ .|.+|+............+......
T Consensus 117 ~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~ 196 (270)
T 1rwi_B 117 TQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWG 196 (270)
T ss_dssp TTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEE
T ss_pred CCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecccCCCCceE
Confidence 578888888788899999876655443333333567899999999977776655 8999998876654333333355667
Q ss_pred EEe-cCCCEEEEeeCCCeEEEEecc
Q 006939 80 LNV-HEGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 80 l~~-~dg~lL~sg~~Dg~V~vWdv~ 103 (625)
+.+ ++|.++++...++.|.+|+.+
T Consensus 197 i~~d~~g~l~v~~~~~~~v~~~~~~ 221 (270)
T 1rwi_B 197 IAVDEAGTVYVTEHNTNQVVKLLAG 221 (270)
T ss_dssp EEECTTCCEEEEETTTSCEEEECTT
T ss_pred EEECCCCCEEEEECCCCcEEEEcCC
Confidence 777 677888888778899999876
No 188
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=97.06 E-value=0.0042 Score=66.57 Aligned_cols=101 Identities=14% Similarity=0.018 Sum_probs=77.3
Q ss_pred CCCCEEEEEeC-----CCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEe----------CC-cEEEEeCCCC
Q 006939 1 MSGYFHFSGSA-----DRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGL----------HE-SLKVFSWEPI 64 (625)
Q Consensus 1 PdG~lLASGS~-----D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs----------~D-sIrVWdl~sg 64 (625)
||+..+..... +++|.+.|..+++.+..+..-..+ . +.++|||++++.+. .+ .|.+||..+.
T Consensus 42 pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~ 119 (386)
T 3sjl_D 42 PDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTL 119 (386)
T ss_dssp CCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred CCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCC
Confidence 67888877765 679999999999999888643344 4 99999999887654 23 7999999999
Q ss_pred eeEEEEeccC-------CceeEEEe-cCCCEEEEeeC--CCeEEEEecc
Q 006939 65 RCHDAVDVGW-------SRLSDLNV-HEGKLLGCSYN--QSCVGVWVVD 103 (625)
Q Consensus 65 ~~i~t~~~~~-------s~v~~l~~-~dg~lL~sg~~--Dg~V~vWdv~ 103 (625)
+.+..+.++. .....+.+ ++|++|..+.. ++.|.++|+.
T Consensus 120 ~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~ 168 (386)
T 3sjl_D 120 LPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLE 168 (386)
T ss_dssp CEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETT
T ss_pred eEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECC
Confidence 9888776532 12344555 79998876653 6899999988
No 189
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=97.04 E-value=0.0065 Score=62.42 Aligned_cols=102 Identities=14% Similarity=-0.081 Sum_probs=72.9
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCeEEEEeCCCCCCeEEEE--EcCCCCEEEEE----------------------eCC-c
Q 006939 1 MSGYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLT--FNPDGRTLLCG----------------------LHE-S 55 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~--fsPdg~~LvSg----------------------s~D-s 55 (625)
|||+.|+.++.++.|.+||+.+++....+..+...+.... ++|++..++.. ..+ .
T Consensus 90 pdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (388)
T 3pe7_A 90 PDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCR 169 (388)
T ss_dssp TTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEE
T ss_pred CCCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcce
Confidence 7999999999999999999999998777666655554443 48999988742 234 6
Q ss_pred EEEEeCCCCeeEEEEeccCCceeEEEe-c-CCCEEEEeeCC------CeEEEEecc
Q 006939 56 LKVFSWEPIRCHDAVDVGWSRLSDLNV-H-EGKLLGCSYNQ------SCVGVWVVD 103 (625)
Q Consensus 56 IrVWdl~sg~~i~t~~~~~s~v~~l~~-~-dg~lL~sg~~D------g~V~vWdv~ 103 (625)
|.+||+.+++...... +...+..+.+ + +|+.|+....+ ..|.+||.+
T Consensus 170 l~~~d~~~g~~~~l~~-~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~ 224 (388)
T 3pe7_A 170 LMRVDLKTGESTVILQ-ENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINED 224 (388)
T ss_dssp EEEEETTTCCEEEEEE-ESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETT
T ss_pred EEEEECCCCceEEeec-CCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCC
Confidence 9999999887655443 3334566666 7 88888766553 255566554
No 190
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=97.03 E-value=0.0013 Score=66.48 Aligned_cols=97 Identities=11% Similarity=0.100 Sum_probs=74.0
Q ss_pred CEEEEEeCCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCeeEEEEeccCCceeEEEe
Q 006939 4 YFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVDVGWSRLSDLNV 82 (625)
Q Consensus 4 ~lLASGS~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~i~t~~~~~s~v~~l~~ 82 (625)
..++..+.+++++.| .++.+..+..+...+.+++|+++|.+++++..+ .|.+||..+++...........+..+.+
T Consensus 18 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~ 94 (333)
T 2dg1_A 18 NSAVPIISESELQTI---TAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKI 94 (333)
T ss_dssp GCSSCCCCGGGSCEE---ECEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEE
T ss_pred cceeEEeecccCccc---ccceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEE
Confidence 344455678888889 466677777777788999999999988888777 8999999988776544334456777887
Q ss_pred -cCCCEEEEeeCC----CeEEEEecc
Q 006939 83 -HEGKLLGCSYNQ----SCVGVWVVD 103 (625)
Q Consensus 83 -~dg~lL~sg~~D----g~V~vWdv~ 103 (625)
++++++++...+ +.|.+||.+
T Consensus 95 ~~dg~l~v~~~~~~~~~~~i~~~d~~ 120 (333)
T 2dg1_A 95 HKDGRLFVCYLGDFKSTGGIFAATEN 120 (333)
T ss_dssp CTTSCEEEEECTTSSSCCEEEEECTT
T ss_pred CCCCcEEEEeCCCCCCCceEEEEeCC
Confidence 688888887766 689999876
No 191
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.03 E-value=0.0011 Score=68.16 Aligned_cols=71 Identities=14% Similarity=0.054 Sum_probs=52.5
Q ss_pred CCCCEEEEEeCC---CeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCeeEEEEe
Q 006939 1 MSGYFHFSGSAD---RTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVD 71 (625)
Q Consensus 1 PdG~lLASGS~D---~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~i~t~~ 71 (625)
|||++|+.++.+ ..|.+||+.+++......++......+.|+|||++|+.++.+ .|.+|++.+++......
T Consensus 45 pdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~ 119 (396)
T 3c5m_A 45 QDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQVIYT 119 (396)
T ss_dssp TTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE
T ss_pred CCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEe
Confidence 789998777543 368889999888655444443333347899999999887777 89999999887655444
No 192
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=96.89 E-value=0.0081 Score=68.33 Aligned_cols=103 Identities=15% Similarity=0.035 Sum_probs=70.1
Q ss_pred CCCCEEEEEeCCCe----------------EEEEECCCCe----EEEEeCCCCCCeEEEEEcCCCCEEEEEeC-----C-
Q 006939 1 MSGYFHFSGSADRT----------------VKFWDLETFE----LIGSAGPETSGVRCLTFNPDGRTLLCGLH-----E- 54 (625)
Q Consensus 1 PdG~lLASGS~D~t----------------VkIWDL~tg~----~i~tl~~h~~~V~sv~fsPdg~~LvSgs~-----D- 54 (625)
|||+.|+.++.|+. |.+|++.+++ ++.....|...+..+.|+|||++|+.++. +
T Consensus 180 pDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~ 259 (710)
T 2xdw_A 180 HDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVN 259 (710)
T ss_dssp TTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCC
T ss_pred eCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCcc
Confidence 79999999988876 9999998876 33333445566889999999998886543 4
Q ss_pred cEEEEeCCC------Ce-eEEEEeccCCceeEEEecCCCEEEEeeC-C---CeEEEEecc
Q 006939 55 SLKVFSWEP------IR-CHDAVDVGWSRLSDLNVHEGKLLGCSYN-Q---SCVGVWVVD 103 (625)
Q Consensus 55 sIrVWdl~s------g~-~i~t~~~~~s~v~~l~~~dg~lL~sg~~-D---g~V~vWdv~ 103 (625)
.|.+||+.+ +. ....+..+.........++|..|+..+. + +.|.+||++
T Consensus 260 ~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~ 319 (710)
T 2xdw_A 260 RLWYCDLQQESNGITGILKWVKLIDNFEGEYDYVTNEGTVFTFKTNRHSPNYRLINIDFT 319 (710)
T ss_dssp EEEEEEGGGSSSSSCSSCCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETT
T ss_pred EEEEEECcccccccCCccceEEeeCCCCcEEEEEeccCCEEEEEECCCCCCCEEEEEeCC
Confidence 799999976 43 3444444444444433466666544433 2 358888876
No 193
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=96.87 E-value=0.0061 Score=62.62 Aligned_cols=102 Identities=14% Similarity=0.010 Sum_probs=75.1
Q ss_pred CCCCEEEEEeCC----------CeEEEEECCCCeEEEEeCCC-CCCeEEEEEcCCCCEEEEEeCCcEEEEeCCCCeeEE-
Q 006939 1 MSGYFHFSGSAD----------RTVKFWDLETFELIGSAGPE-TSGVRCLTFNPDGRTLLCGLHESLKVFSWEPIRCHD- 68 (625)
Q Consensus 1 PdG~lLASGS~D----------~tVkIWDL~tg~~i~tl~~h-~~~V~sv~fsPdg~~LvSgs~DsIrVWdl~sg~~i~- 68 (625)
|+|++++++..+ +.|.+||..+++....+... ......++|+|++.+++.+.. .|.+||..+++...
T Consensus 181 ~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~-~v~~~d~~t~~~~~~ 259 (328)
T 3dsm_A 181 KYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN-DIWRMPVEADRVPVR 259 (328)
T ss_dssp TTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS-SEEEEETTCSSCCSS
T ss_pred CCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc-EEEEEECCCCceeee
Confidence 578888777655 78999999999988776532 246899999999998887654 89999998877532
Q ss_pred -EEeccCCceeEEEe-c-CCCEEEEe----eCCCeEEEEecc
Q 006939 69 -AVDVGWSRLSDLNV-H-EGKLLGCS----YNQSCVGVWVVD 103 (625)
Q Consensus 69 -t~~~~~s~v~~l~~-~-dg~lL~sg----~~Dg~V~vWdv~ 103 (625)
.+..+......+.+ + ++.++++. ..++.|.+||.+
T Consensus 260 ~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~ 301 (328)
T 3dsm_A 260 PFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ 301 (328)
T ss_dssp CSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT
T ss_pred eeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC
Confidence 11222345667777 4 67777776 667899999887
No 194
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=96.87 E-value=0.014 Score=61.75 Aligned_cols=100 Identities=10% Similarity=-0.052 Sum_probs=72.7
Q ss_pred CCCCEEEEEeC--CC---eEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEe----------CC-cEEEEeCCCC
Q 006939 1 MSGYFHFSGSA--DR---TVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGL----------HE-SLKVFSWEPI 64 (625)
Q Consensus 1 PdG~lLASGS~--D~---tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs----------~D-sIrVWdl~sg 64 (625)
|++.++..... +. +|.+||+.+++.+..+..-..+ .+.|+|||++++.+. .+ .|.+||..+.
T Consensus 30 ~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~ 107 (373)
T 2mad_H 30 ADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTF 107 (373)
T ss_pred CCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCC
Confidence 46676666543 22 8899999999998887653333 899999999988764 23 7999999988
Q ss_pred eeEEEEecc-------CCceeEEEe-cCCCEEEEeeC--CCeEEEEecc
Q 006939 65 RCHDAVDVG-------WSRLSDLNV-HEGKLLGCSYN--QSCVGVWVVD 103 (625)
Q Consensus 65 ~~i~t~~~~-------~s~v~~l~~-~dg~lL~sg~~--Dg~V~vWdv~ 103 (625)
+.+..+... ......+.+ ++|++|..+.. ++.|.++| .
T Consensus 108 ~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~ 155 (373)
T 2mad_H 108 LPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-Q 155 (373)
T ss_pred cEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-C
Confidence 887766543 122345566 79998877653 47899998 7
No 195
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=96.86 E-value=0.008 Score=60.81 Aligned_cols=96 Identities=13% Similarity=0.105 Sum_probs=67.5
Q ss_pred CCCCEEEEEeCCC--------eEEEEECCCCeEEEEeCCCCCCeEE-EEEcCCCCEEEEEeCC-cEEEEeCCCCeeEEEE
Q 006939 1 MSGYFHFSGSADR--------TVKFWDLETFELIGSAGPETSGVRC-LTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAV 70 (625)
Q Consensus 1 PdG~lLASGS~D~--------tVkIWDL~tg~~i~tl~~h~~~V~s-v~fsPdg~~LvSgs~D-sIrVWdl~sg~~i~t~ 70 (625)
|||++|+.++.+. .|.+|| +++......+|...+.. +.|+ || +++++..+ .++|| +..++.....
T Consensus 224 pdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g~~~~~~ 298 (347)
T 2gop_A 224 SDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDGEIKPIA 298 (347)
T ss_dssp ECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EESSSEEEEE
T ss_pred CCCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCCceEEEe
Confidence 6898888777543 677788 67766556667777886 8999 98 88888877 89999 8766654433
Q ss_pred eccCCceeEEEecCCCEEEEeeCCCeE-EEEecc
Q 006939 71 DVGWSRLSDLNVHEGKLLGCSYNQSCV-GVWVVD 103 (625)
Q Consensus 71 ~~~~s~v~~l~~~dg~lL~sg~~Dg~V-~vWdv~ 103 (625)
. +...+..+.+.. .++++++.++.. .+|.++
T Consensus 299 ~-~~~~v~~~~~s~-~~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 299 K-GRHWIMGFDVDE-IVVYLKETATRLRELFTWD 330 (347)
T ss_dssp C-SSSEEEEEEESS-SEEEEEECSSSCCEEEEES
T ss_pred c-CCCeEEeeeeeC-cEEEEEcCCCChHHheEeC
Confidence 3 344566777744 777776666654 777664
No 196
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=96.86 E-value=0.0033 Score=67.37 Aligned_cols=79 Identities=14% Similarity=0.116 Sum_probs=60.6
Q ss_pred EEEEeCCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCee--EEEE------e---cc
Q 006939 6 HFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRC--HDAV------D---VG 73 (625)
Q Consensus 6 LASGS~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~--i~t~------~---~~ 73 (625)
+|.++.||+|.+||+.++.... +...|+|++|+|+| ++.|..| ++++|+...+.+ ...+ . .+
T Consensus 139 ~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~ 212 (388)
T 1xip_A 139 LVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDVTNSQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVE 212 (388)
T ss_dssp EEEEETTSEEEEEETTTCCEEE----EEESEEEEEECSSE--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTT
T ss_pred EEEEECCCCEEEEEccCCcccc----ccCCceEEEEcCCc--eEEEEcCCcEEEEcCCCccccccceecCCcccccccCC
Confidence 7888999999999999888653 44689999999999 4566666 999999988886 5555 1 24
Q ss_pred CCceeEEEe-cCCCEEEE
Q 006939 74 WSRLSDLNV-HEGKLLGC 90 (625)
Q Consensus 74 ~s~v~~l~~-~dg~lL~s 90 (625)
...+..+.| .++.++++
T Consensus 213 ~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 213 EYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp TSEEEEEEESSSSEEEEE
T ss_pred CeeEEEEEEecCCeEEEE
Confidence 466777777 56666643
No 197
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=96.67 E-value=0.016 Score=64.94 Aligned_cols=102 Identities=13% Similarity=0.070 Sum_probs=76.7
Q ss_pred CCCCEEEEEeCCCeEEEEECC--CCeEEEEeCCCCCCeEEEEEc----CCCCEEEEEeCC--cEEEEeCCCCeeEEEEec
Q 006939 1 MSGYFHFSGSADRTVKFWDLE--TFELIGSAGPETSGVRCLTFN----PDGRTLLCGLHE--SLKVFSWEPIRCHDAVDV 72 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~--tg~~i~tl~~h~~~V~sv~fs----Pdg~~LvSgs~D--sIrVWdl~sg~~i~t~~~ 72 (625)
|||+++++++.|+.|.+||+. +++.+..+... ...+.+.|+ |||++++.+... ++.|||..+.+.+..+..
T Consensus 206 pDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G-~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~ 284 (567)
T 1qks_A 206 ASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIG-SEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQST 284 (567)
T ss_dssp TTSCEEEEEETTSEEEEEETTSSSCCEEEEEECC-SEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEEC
T ss_pred CCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecC-CCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEec
Confidence 799999999999999999996 88888877653 456899999 799998876653 899999999988877754
Q ss_pred cC-----------CceeEEEe-cC-CCEEEEeeCCCeEEEEecc
Q 006939 73 GW-----------SRLSDLNV-HE-GKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 73 ~~-----------s~v~~l~~-~d-g~lL~sg~~Dg~V~vWdv~ 103 (625)
+. ..+..+.. ++ ..+++.....|.|.++|..
T Consensus 285 ~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~ 328 (567)
T 1qks_A 285 RGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYT 328 (567)
T ss_dssp CEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETT
T ss_pred cccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecC
Confidence 31 13444544 44 3345555666888888765
No 198
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=96.65 E-value=0.00049 Score=72.57 Aligned_cols=100 Identities=10% Similarity=-0.040 Sum_probs=61.7
Q ss_pred CCCEEEEEeCCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCeeEEEEeccCCc-e-e
Q 006939 2 SGYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVDVGWSR-L-S 78 (625)
Q Consensus 2 dG~lLASGS~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~i~t~~~~~s~-v-~ 78 (625)
++.++++|+.|+.|..||..+|+.+..+.. +.+.+..+..++..+++++.| .|.+||..+|+....+..+... + .
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~ 85 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQA 85 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTT
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcccccc
Confidence 467889999999999999999999888776 455556666778777777777 9999999988876554322100 0 0
Q ss_pred EEEecCCCEEEEeeCCCeEEEEecc
Q 006939 79 DLNVHEGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 79 ~l~~~dg~lL~sg~~Dg~V~vWdv~ 103 (625)
...+..+..+++++.++.|..||..
T Consensus 86 sp~~~~~~~v~~g~~dg~v~a~D~~ 110 (369)
T 2hz6_A 86 SPCRSSDGILYMGKKQDIWYVIDLL 110 (369)
T ss_dssp CSCC-----CCCCEEEEEEEEECCC
T ss_pred CceEecCCEEEEEeCCCEEEEEECC
Confidence 1111134466677788899999987
No 199
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=96.58 E-value=0.0089 Score=61.18 Aligned_cols=100 Identities=12% Similarity=-0.018 Sum_probs=63.2
Q ss_pred CCCCEEEEEeCC-----CeEEEEECCCCeEEEEeCCCCCCeEEEEEcC-CCCEEEEEe----------------CC-cEE
Q 006939 1 MSGYFHFSGSAD-----RTVKFWDLETFELIGSAGPETSGVRCLTFNP-DGRTLLCGL----------------HE-SLK 57 (625)
Q Consensus 1 PdG~lLASGS~D-----~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsP-dg~~LvSgs----------------~D-sIr 57 (625)
|||+.|+.++.+ +.|.+||+.+++........ ... +.|+| ||++++.++ .+ .|.
T Consensus 247 pdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~--~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~ 323 (396)
T 3c5m_A 247 PDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMP--PCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLY 323 (396)
T ss_dssp TTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECC--SEE-EEEECSSSSEEEEEECCC----------CCCCCCEEE
T ss_pred CCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCC--CCC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEE
Confidence 688877776554 45999999988754332211 233 88999 999888653 23 799
Q ss_pred EEeCCCCeeEEEEeccCC----------ceeEEEe-cCCCEEEEee-CCCeEEEEecc
Q 006939 58 VFSWEPIRCHDAVDVGWS----------RLSDLNV-HEGKLLGCSY-NQSCVGVWVVD 103 (625)
Q Consensus 58 VWdl~sg~~i~t~~~~~s----------~v~~l~~-~dg~lL~sg~-~Dg~V~vWdv~ 103 (625)
+||+.++........... ......+ ++|+.|+.++ .++...+|.++
T Consensus 324 ~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~ 381 (396)
T 3c5m_A 324 VLNTKAKSAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIAD 381 (396)
T ss_dssp EEETTTTBCCEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred EEecccCceEEccCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEE
Confidence 999988765432221110 1233444 7888775554 45667777665
No 200
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=96.51 E-value=0.0063 Score=69.72 Aligned_cols=101 Identities=16% Similarity=0.103 Sum_probs=67.1
Q ss_pred CCCCEEEEEeCC-----CeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeCC-c--------------EEEEe
Q 006939 1 MSGYFHFSGSAD-----RTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-S--------------LKVFS 60 (625)
Q Consensus 1 PdG~lLASGS~D-----~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~D-s--------------IrVWd 60 (625)
|||++||.++.+ .+|++||+.+++.+... .+...+..+.|+|| +.|+.+..+ . |++|+
T Consensus 172 PDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~-~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~ 249 (741)
T 1yr2_A 172 DDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADE-LKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHR 249 (741)
T ss_dssp TTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEE-EEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEE
T ss_pred CCCCEEEEEEcCCCCceEEEEEEECCCCCCCCcc-CCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEE
Confidence 799999887654 47999999999875431 11122357889999 888766654 3 88999
Q ss_pred CCCCeeE--EEEeccC--CceeEEEe-cCCCEEEEeeCC-----CeEEEEecc
Q 006939 61 WEPIRCH--DAVDVGW--SRLSDLNV-HEGKLLGCSYNQ-----SCVGVWVVD 103 (625)
Q Consensus 61 l~sg~~i--~t~~~~~--s~v~~l~~-~dg~lL~sg~~D-----g~V~vWdv~ 103 (625)
+.++... ..+.... ..+..+.+ ++|++|+....+ ..|.+||++
T Consensus 250 lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~ 302 (741)
T 1yr2_A 250 LGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVT 302 (741)
T ss_dssp TTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEE
T ss_pred CCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECC
Confidence 8776532 2222211 12455555 799888766543 378888876
No 201
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=96.50 E-value=0.019 Score=65.23 Aligned_cols=102 Identities=7% Similarity=-0.053 Sum_probs=68.8
Q ss_pred CCCCEEEEEeCCCe-------------EEEEECCCCe----EEEEeCCCCCCeEEEEEcCCCCEEEEEeC-C----cEEE
Q 006939 1 MSGYFHFSGSADRT-------------VKFWDLETFE----LIGSAGPETSGVRCLTFNPDGRTLLCGLH-E----SLKV 58 (625)
Q Consensus 1 PdG~lLASGS~D~t-------------VkIWDL~tg~----~i~tl~~h~~~V~sv~fsPdg~~LvSgs~-D----sIrV 58 (625)
|||+.|+.++.|.+ |++|++.++. ++.....|...+..+.|+|||++|+.++. + .|.+
T Consensus 177 pDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~ 256 (695)
T 2bkl_A 177 PDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYW 256 (695)
T ss_dssp TTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEE
T ss_pred cCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEE
Confidence 79999999999887 9999999876 44444556667899999999998775442 2 4777
Q ss_pred EeCCCCeeEEEEeccCCceeEEEecCCCEEEEee---CCCeEEEEecc
Q 006939 59 FSWEPIRCHDAVDVGWSRLSDLNVHEGKLLGCSY---NQSCVGVWVVD 103 (625)
Q Consensus 59 Wdl~sg~~i~t~~~~~s~v~~l~~~dg~lL~sg~---~Dg~V~vWdv~ 103 (625)
|+...+.... +..+........+++|.+++.+. .++.|.+||++
T Consensus 257 ~~~~~~~~~~-l~~~~~~~~~~~~~~g~l~~~s~~~~~~~~l~~~d~~ 303 (695)
T 2bkl_A 257 KRPGEKDFRL-LVKGVGAKYEVHAWKDRFYVLTDEGAPRQRVFEVDPA 303 (695)
T ss_dssp ECTTCSSCEE-EEECSSCCEEEEEETTEEEEEECTTCTTCEEEEEBTT
T ss_pred EcCCCCceEE-eecCCCceEEEEecCCcEEEEECCCCCCCEEEEEeCC
Confidence 7665554333 33333333343446666545544 25788888876
No 202
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=96.45 E-value=0.015 Score=57.83 Aligned_cols=93 Identities=14% Similarity=0.025 Sum_probs=64.8
Q ss_pred CCCCEEEE-------EeCCCeEEEEECCCCeEEEEeC----CCCCCeEEEEEcCC-CCEEEEEeCCcEEEEeCCCCeeEE
Q 006939 1 MSGYFHFS-------GSADRTVKFWDLETFELIGSAG----PETSGVRCLTFNPD-GRTLLCGLHESLKVFSWEPIRCHD 68 (625)
Q Consensus 1 PdG~lLAS-------GS~D~tVkIWDL~tg~~i~tl~----~h~~~V~sv~fsPd-g~~LvSgs~DsIrVWdl~sg~~i~ 68 (625)
++|.++++ +..++.|..||..+++...... ++...+..+.+.++ |+++++...+.|.+||.. ++...
T Consensus 27 ~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~~~l~~~d~~-g~~~~ 105 (314)
T 1pjx_A 27 KNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRLGLLVVQTD-GTFEE 105 (314)
T ss_dssp TTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTTEEEEEETT-SCEEE
T ss_pred CCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECCCCEEEEeCC-CCEEE
Confidence 57888888 6778899999998887643322 24567899999999 776666554589999998 76543
Q ss_pred E-Eec----cCCceeEEEe-cCCCEEEEeeCC
Q 006939 69 A-VDV----GWSRLSDLNV-HEGKLLGCSYNQ 94 (625)
Q Consensus 69 t-~~~----~~s~v~~l~~-~dg~lL~sg~~D 94 (625)
. ... ....+.++.+ ++|+++++...+
T Consensus 106 ~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~ 137 (314)
T 1pjx_A 106 IAKKDSEGRRMQGCNDCAFDYEGNLWITAPAG 137 (314)
T ss_dssp CCSBCTTSCBCBCCCEEEECTTSCEEEEECBC
T ss_pred EEeccCCCccccCCcCEEECCCCCEEEEecCc
Confidence 3 221 1234667777 678887776654
No 203
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=96.44 E-value=0.016 Score=62.07 Aligned_cols=101 Identities=16% Similarity=0.077 Sum_probs=74.6
Q ss_pred CCCCEEEEEe----------CCCeEEEEECCCCeEEEEeCCC-------CCCeEEEEEcCCCCEEEEEeC--C-cEEEEe
Q 006939 1 MSGYFHFSGS----------ADRTVKFWDLETFELIGSAGPE-------TSGVRCLTFNPDGRTLLCGLH--E-SLKVFS 60 (625)
Q Consensus 1 PdG~lLASGS----------~D~tVkIWDL~tg~~i~tl~~h-------~~~V~sv~fsPdg~~LvSgs~--D-sIrVWd 60 (625)
|||++++.++ .+.+|.+||..+++.+..+..- ......+.|+|||++++.+.. + .|.|+|
T Consensus 87 pDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID 166 (386)
T 3sjl_D 87 DDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVD 166 (386)
T ss_dssp TTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEE
T ss_pred CCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEE
Confidence 7888887765 3678999999999998876321 124667899999999887653 4 899999
Q ss_pred CCCCeeEEEEeccCCceeEEEecCCCEEEEeeCCCeEEEEecc
Q 006939 61 WEPIRCHDAVDVGWSRLSDLNVHEGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 61 l~sg~~i~t~~~~~s~v~~l~~~dg~lL~sg~~Dg~V~vWdv~ 103 (625)
..+++.+..+.... +..+.....+.+++.+.||.+.++++.
T Consensus 167 ~~t~~vv~tI~v~g--~~~~~P~g~~~~~~~~~DG~~~~v~~~ 207 (386)
T 3sjl_D 167 LEGKAFKRMLDVPD--CYHIFPTAPDTFFMHCRDGSLAKVAFG 207 (386)
T ss_dssp TTTTEEEEEEECCS--EEEEEEEETTEEEEEETTSCEEEEECC
T ss_pred CCCCcEEEEEECCC--cceeecCCCceeEEECCCCCEEEEECC
Confidence 99999988886543 222222345566677788998888876
No 204
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=96.41 E-value=0.05 Score=53.10 Aligned_cols=101 Identities=8% Similarity=0.028 Sum_probs=72.7
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCeEEEE-eCCCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCeeEEE-EeccCCce
Q 006939 1 MSGYFHFSGSADRTVKFWDLETFELIGS-AGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDA-VDVGWSRL 77 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~tg~~i~t-l~~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~i~t-~~~~~s~v 77 (625)
++|.++++...++.|..||. +++.... +..+...+..+++.++|.++++...+ .|.+|+. ++..... .......+
T Consensus 150 ~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~ 227 (299)
T 2z2n_A 150 SDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITEFKIPTPNARP 227 (299)
T ss_dssp TTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCE
T ss_pred CCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEEEECCCCCCCc
Confidence 57888888777889999999 6766543 33445678899999999977776555 8999998 6654332 12233556
Q ss_pred eEEEe-cCCCEEEEeeCCCeEEEEecc
Q 006939 78 SDLNV-HEGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 78 ~~l~~-~dg~lL~sg~~Dg~V~vWdv~ 103 (625)
..+.+ ++|.++++...++.|..||.+
T Consensus 228 ~~i~~~~~g~l~v~~~~~~~i~~~d~~ 254 (299)
T 2z2n_A 228 HAITAGAGIDLWFTEWGANKIGRLTSN 254 (299)
T ss_dssp EEEEECSTTCEEEEETTTTEEEEEETT
T ss_pred eeEEECCCCCEEEeccCCceEEEECCC
Confidence 67777 578877777677889999874
No 205
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=96.31 E-value=0.045 Score=57.71 Aligned_cols=99 Identities=13% Similarity=-0.032 Sum_probs=70.1
Q ss_pred CCCCEEEEEe----------CCCeEEEEECCCCeEEEEeCCC-------CCCeEEEEEcCCCCEEEEEeC--C-cEEEEe
Q 006939 1 MSGYFHFSGS----------ADRTVKFWDLETFELIGSAGPE-------TSGVRCLTFNPDGRTLLCGLH--E-SLKVFS 60 (625)
Q Consensus 1 PdG~lLASGS----------~D~tVkIWDL~tg~~i~tl~~h-------~~~V~sv~fsPdg~~LvSgs~--D-sIrVWd 60 (625)
|||++|+.+. .+.+|.+||..+.+.+..+..- ......+.|+|||++|+.+.. + .|.++|
T Consensus 75 pDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD 154 (373)
T 2mad_H 75 HSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV 154 (373)
T ss_pred CCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE
Confidence 7899888876 3678999999998887765321 123568899999999987763 3 799999
Q ss_pred CCCCeeEEE-EeccCCceeEEEecCCCEEEEeeCCCeEEEEec
Q 006939 61 WEPIRCHDA-VDVGWSRLSDLNVHEGKLLGCSYNQSCVGVWVV 102 (625)
Q Consensus 61 l~sg~~i~t-~~~~~s~v~~l~~~dg~lL~sg~~Dg~V~vWdv 102 (625)
.+++.... +..... ..+.......+++.+.|+.+.+||.
T Consensus 155 -~t~~~~~~~i~~~~~--~~~~~~~~~~~~~~~~dg~~~~vd~ 194 (373)
T 2mad_H 155 -QGGSSDDQLLSSPTC--YHIHPGAPSTFYLLCAQGGLAKTDH 194 (373)
T ss_pred -CCCCEEeEEcCCCce--EEEEeCCCceEEEEcCCCCEEEEEC
Confidence 99988777 654322 1122123345556667888888877
No 206
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=96.30 E-value=0.063 Score=52.41 Aligned_cols=101 Identities=8% Similarity=-0.031 Sum_probs=72.6
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCeEEEE-eCCCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCeeEEE-EeccCCce
Q 006939 1 MSGYFHFSGSADRTVKFWDLETFELIGS-AGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDA-VDVGWSRL 77 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~tg~~i~t-l~~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~i~t-~~~~~s~v 77 (625)
|+|.++++...++.|..||. +++.... ...+...+..+++.++|.++++...+ .|.+||. +++.... .......+
T Consensus 108 ~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~ 185 (299)
T 2z2n_A 108 PNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGP 185 (299)
T ss_dssp TTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCE
T ss_pred CCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcc
Confidence 57888888877889999998 5655432 33345678999999999888876655 8999998 6665432 22233446
Q ss_pred eEEEe-cCCCEEEEeeCCCeEEEEecc
Q 006939 78 SDLNV-HEGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 78 ~~l~~-~dg~lL~sg~~Dg~V~vWdv~ 103 (625)
..+.+ +++.++++...++.|.+||..
T Consensus 186 ~~i~~~~~g~l~v~~~~~~~i~~~~~~ 212 (299)
T 2z2n_A 186 VGITKGNDDALWFVEIIGNKIGRITTS 212 (299)
T ss_dssp EEEEECTTSSEEEEETTTTEEEEECTT
T ss_pred eeEEECCCCCEEEEccCCceEEEECCC
Confidence 67777 578887777777889988763
No 207
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=96.07 E-value=0.046 Score=59.20 Aligned_cols=101 Identities=12% Similarity=-0.040 Sum_probs=74.1
Q ss_pred CCCCEEEEEeC-C----CeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEe----------CC-cEEEEeCCCC
Q 006939 1 MSGYFHFSGSA-D----RTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGL----------HE-SLKVFSWEPI 64 (625)
Q Consensus 1 PdG~lLASGS~-D----~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs----------~D-sIrVWdl~sg 64 (625)
|++..++.... + ++|.++|+.+++.+..+..-..+ .+.|+|||++++.+. .+ .|.++|..++
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~ 159 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF 159 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC
Confidence 45665555544 3 69999999999999888643344 799999999887664 23 8999999999
Q ss_pred eeEEEEecc-------CCceeEEEe-cCCCEEEEeeC--CCeEEEEecc
Q 006939 65 RCHDAVDVG-------WSRLSDLNV-HEGKLLGCSYN--QSCVGVWVVD 103 (625)
Q Consensus 65 ~~i~t~~~~-------~s~v~~l~~-~dg~lL~sg~~--Dg~V~vWdv~ 103 (625)
+.+..+... ......+.+ ++|++|..+.. ++.|.+.|+.
T Consensus 160 ~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~ 208 (426)
T 3c75_H 160 LPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLE 208 (426)
T ss_dssp CEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETT
T ss_pred cEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECC
Confidence 988777653 122334555 79998877653 5789999987
No 208
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=95.89 E-value=0.13 Score=50.02 Aligned_cols=101 Identities=13% Similarity=0.070 Sum_probs=72.6
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCeEEE-EeCCCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCeeEEEE-eccCCce
Q 006939 1 MSGYFHFSGSADRTVKFWDLETFELIG-SAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAV-DVGWSRL 77 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~tg~~i~-tl~~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~i~t~-~~~~s~v 77 (625)
++|.++++...++.|.+||.. ++... .+..+...+..+++.++|.++++...+ .|.+||.. ++..... ......+
T Consensus 29 ~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~ 106 (300)
T 2qc5_A 29 EDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFTEYPLPQPDSGP 106 (300)
T ss_dssp TTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCE
T ss_pred CCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeEEecCCCCCCCC
Confidence 578888888788999999988 66543 233344678999999999988876655 89999988 5543221 1123456
Q ss_pred eEEEe-cCCCEEEEeeCCCeEEEEecc
Q 006939 78 SDLNV-HEGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 78 ~~l~~-~dg~lL~sg~~Dg~V~vWdv~ 103 (625)
..+.+ +++.++++...++.|..|+.+
T Consensus 107 ~~i~~~~~g~l~v~~~~~~~i~~~~~~ 133 (300)
T 2qc5_A 107 YGITEGLNGDIWFTQLNGDRIGKLTAD 133 (300)
T ss_dssp EEEEECSTTCEEEEETTTTEEEEECTT
T ss_pred ccceECCCCCEEEEccCCCeEEEECCC
Confidence 67776 578888887767888888765
No 209
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=95.77 E-value=0.094 Score=59.94 Aligned_cols=102 Identities=11% Similarity=-0.110 Sum_probs=65.8
Q ss_pred CCCCEEEEEeCCCe--------------EEEEECCCCe----EEEEeCCCCCCeEEEEEcCCCCEEEEEeC-----C-cE
Q 006939 1 MSGYFHFSGSADRT--------------VKFWDLETFE----LIGSAGPETSGVRCLTFNPDGRTLLCGLH-----E-SL 56 (625)
Q Consensus 1 PdG~lLASGS~D~t--------------VkIWDL~tg~----~i~tl~~h~~~V~sv~fsPdg~~LvSgs~-----D-sI 56 (625)
|| +.|+.++.|.. |.+|++.++. ++.....+...+..+.|+|||++|+..+. . .|
T Consensus 218 pD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l 296 (741)
T 1yr2_A 218 GN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTV 296 (741)
T ss_dssp TT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEE
T ss_pred CC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceE
Confidence 57 77777776654 8899998765 33333334445889999999998775542 3 69
Q ss_pred EEEeCCCC--eeEEEEeccCCceeEEEecCCCEEEEeeC----CCeEEEEecc
Q 006939 57 KVFSWEPI--RCHDAVDVGWSRLSDLNVHEGKLLGCSYN----QSCVGVWVVD 103 (625)
Q Consensus 57 rVWdl~sg--~~i~t~~~~~s~v~~l~~~dg~lL~sg~~----Dg~V~vWdv~ 103 (625)
.+||+.++ .+...+..+........+++|..|+..++ ++.|.+||++
T Consensus 297 ~~~d~~~~~~~~~~~l~~~~~~~~~~~~~dg~~l~~~s~~~~~~~~l~~~d~~ 349 (741)
T 1yr2_A 297 HVARVTNGKIGPVTALIPDLKAQWDFVDGVGDQLWFVSGDGAPLKKIVRVDLS 349 (741)
T ss_dssp EEEEEETTEECCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEECS
T ss_pred EEEECCCCCCcccEEecCCCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCC
Confidence 99999876 42334433333333333467777766554 3458888876
No 210
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=95.71 E-value=0.056 Score=55.59 Aligned_cols=102 Identities=12% Similarity=-0.018 Sum_probs=69.0
Q ss_pred CCCCEEEEEe--CCCeEEEEECCCCeEEEEe-------CCCCCCeEEEEEcCCCCEEEEEeC-----C-cEEEEeCCCCe
Q 006939 1 MSGYFHFSGS--ADRTVKFWDLETFELIGSA-------GPETSGVRCLTFNPDGRTLLCGLH-----E-SLKVFSWEPIR 65 (625)
Q Consensus 1 PdG~lLASGS--~D~tVkIWDL~tg~~i~tl-------~~h~~~V~sv~fsPdg~~LvSgs~-----D-sIrVWdl~sg~ 65 (625)
|+|++|++.. .++.++||.+.+++.. .+ ..|...+..++|.++|+++++... + .|.+||+.+++
T Consensus 26 ~~g~~~v~~~~~~~~~~~l~~~~~g~~~-~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~ 104 (343)
T 2qe8_A 26 PDGRLFLSLHQFYQPEMQVAELTQDGLI-PFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQ 104 (343)
T ss_dssp TTSCEEEEECGGGCCSCSEEEEETTEEE-ESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTE
T ss_pred CCCCEEEEeCCCCCCceEEEEECCCCee-cCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCe
Confidence 5899998864 2343566666556543 22 234567999999999987775432 3 89999999998
Q ss_pred eEEEEecc------CCceeEEEec-C-CCEEEEee---CCCeEEEEecc
Q 006939 66 CHDAVDVG------WSRLSDLNVH-E-GKLLGCSY---NQSCVGVWVVD 103 (625)
Q Consensus 66 ~i~t~~~~------~s~v~~l~~~-d-g~lL~sg~---~Dg~V~vWdv~ 103 (625)
.+..+... ...+.++.+. + +.++++.. .++.|.+||+.
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~ 153 (343)
T 2qe8_A 105 LSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQ 153 (343)
T ss_dssp EEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETT
T ss_pred EEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECC
Confidence 77666542 1345677773 4 45556655 57889999986
No 211
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=95.61 E-value=0.046 Score=57.98 Aligned_cols=98 Identities=9% Similarity=-0.102 Sum_probs=71.2
Q ss_pred CEEEEEeCCC----eEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEe----------CC-cEEEEeCCCCeeEE
Q 006939 4 YFHFSGSADR----TVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGL----------HE-SLKVFSWEPIRCHD 68 (625)
Q Consensus 4 ~lLASGS~D~----tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs----------~D-sIrVWdl~sg~~i~ 68 (625)
..+++...+. +|.++|..+++.+.++..-..+ .+.|+|||+.++.+. .+ .|.+||..+++.+.
T Consensus 33 ~~yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~ 110 (368)
T 1mda_H 33 RSHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIA 110 (368)
T ss_dssp EEEEEECTTTCSSEEEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEE
T ss_pred eEEEECCccCCccceEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEE
Confidence 3445555455 8889999999999988544445 699999999888765 24 89999999999988
Q ss_pred EEeccC-------CceeEEEe-cCCCEEEEeeC--CCeEEE--Eecc
Q 006939 69 AVDVGW-------SRLSDLNV-HEGKLLGCSYN--QSCVGV--WVVD 103 (625)
Q Consensus 69 t~~~~~-------s~v~~l~~-~dg~lL~sg~~--Dg~V~v--Wdv~ 103 (625)
.+..+. .....+.+ ++|++|..+.. +..|.+ ||..
T Consensus 111 ~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~ 157 (368)
T 1mda_H 111 DIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGAS 157 (368)
T ss_dssp EEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTE
T ss_pred EEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchh
Confidence 886541 12334555 78888876653 467888 8775
No 212
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=95.52 E-value=0.24 Score=48.19 Aligned_cols=101 Identities=9% Similarity=0.061 Sum_probs=70.8
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCeEEEE-eCCCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCeeEEE-EeccCCce
Q 006939 1 MSGYFHFSGSADRTVKFWDLETFELIGS-AGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDA-VDVGWSRL 77 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~tg~~i~t-l~~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~i~t-~~~~~s~v 77 (625)
++|.++++...++.|..||. +++.... ...+...+..+++.++|.++++...+ .|.+|+. .+..... ...+...+
T Consensus 155 ~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~ 232 (300)
T 2qc5_A 155 SDNALWFTENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARP 232 (300)
T ss_dssp TTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCE
T ss_pred CCCCEEEEecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCc
Confidence 46887777777788999998 5665432 23445678999999999887776555 7999998 4544332 22234556
Q ss_pred eEEEe-cCCCEEEEeeCCCeEEEEecc
Q 006939 78 SDLNV-HEGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 78 ~~l~~-~dg~lL~sg~~Dg~V~vWdv~ 103 (625)
..+.+ ++|.++++...++.|..|+..
T Consensus 233 ~~i~~d~~g~l~v~~~~~~~i~~~~~~ 259 (300)
T 2qc5_A 233 HAITAGKNSEIWFTEWGANQIGRITND 259 (300)
T ss_dssp EEEEECSTTCEEEEETTTTEEEEECTT
T ss_pred eEEEECCCCCEEEeccCCCeEEEECCC
Confidence 67777 578877777667889988764
No 213
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=95.51 E-value=0.17 Score=50.66 Aligned_cols=88 Identities=16% Similarity=0.229 Sum_probs=62.6
Q ss_pred CCCEEEEEeCCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeCCcEEEEeCCCCeeEEEEec----cCCce
Q 006939 2 SGYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFSWEPIRCHDAVDV----GWSRL 77 (625)
Q Consensus 2 dG~lLASGS~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~DsIrVWdl~sg~~i~t~~~----~~s~v 77 (625)
++.++++...++.|..||..+++.. .+. +...+.+++|+++|+++++ ..+.|.+||+.+++....... ....+
T Consensus 24 ~~~l~~~d~~~~~i~~~d~~~~~~~-~~~-~~~~~~~i~~~~dG~l~v~-~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~ 100 (297)
T 3g4e_A 24 SNSLLFVDIPAKKVCRWDSFTKQVQ-RVT-MDAPVSSVALRQSGGYVAT-IGTKFCALNWKEQSAVVLATVDNDKKNNRF 100 (297)
T ss_dssp TTEEEEEETTTTEEEEEETTTCCEE-EEE-CSSCEEEEEEBTTSSEEEE-ETTEEEEEETTTTEEEEEEECCTTCSSEEE
T ss_pred CCEEEEEECCCCEEEEEECCCCcEE-EEe-CCCceEEEEECCCCCEEEE-ECCeEEEEECCCCcEEEEEecCCCCCCCCC
Confidence 4667888888899999999987653 232 3467999999999996655 445899999998876443322 22346
Q ss_pred eEEEe-cCCCEEEEee
Q 006939 78 SDLNV-HEGKLLGCSY 92 (625)
Q Consensus 78 ~~l~~-~dg~lL~sg~ 92 (625)
.++.+ ++|+++++..
T Consensus 101 ~di~~d~dG~l~~~~~ 116 (297)
T 3g4e_A 101 NDGKVDPAGRYFAGTM 116 (297)
T ss_dssp EEEEECTTSCEEEEEE
T ss_pred CCEEECCCCCEEEecC
Confidence 67777 6888776553
No 214
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=95.42 E-value=0.033 Score=63.44 Aligned_cols=100 Identities=11% Similarity=0.085 Sum_probs=63.7
Q ss_pred CCCCEEE-----EEeCCCeEEEEECCCCeEEEE-eCCCCCCeEEEEEcCCCCEEEEEeCC-c-------------EEEEe
Q 006939 1 MSGYFHF-----SGSADRTVKFWDLETFELIGS-AGPETSGVRCLTFNPDGRTLLCGLHE-S-------------LKVFS 60 (625)
Q Consensus 1 PdG~lLA-----SGS~D~tVkIWDL~tg~~i~t-l~~h~~~V~sv~fsPdg~~LvSgs~D-s-------------IrVWd 60 (625)
|||++|| .|+.+.+|++||+.+++.+.. +.. .....++|+ ||+.|+.+..+ . |++|+
T Consensus 138 pDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~--~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~ 214 (693)
T 3iuj_A 138 RDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKD--VKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHR 214 (693)
T ss_dssp TTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEE--EESCCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEE
T ss_pred CCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCC--ceeccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEE
Confidence 7899888 455557899999999986543 211 112567899 99988776654 3 89999
Q ss_pred CCCCeeE--EEEec---cCCceeEEEe-cCCCEEEEee----CCCeEEEEecc
Q 006939 61 WEPIRCH--DAVDV---GWSRLSDLNV-HEGKLLGCSY----NQSCVGVWVVD 103 (625)
Q Consensus 61 l~sg~~i--~t~~~---~~s~v~~l~~-~dg~lL~sg~----~Dg~V~vWdv~ 103 (625)
+.++... ..+.. +-.....+.+ ++|++|+... ..+.|.+||++
T Consensus 215 lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~ 267 (693)
T 3iuj_A 215 LGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLS 267 (693)
T ss_dssp TTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETT
T ss_pred CCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECC
Confidence 8775432 22221 1122334444 7898874432 23578888876
No 215
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=95.38 E-value=0.12 Score=51.66 Aligned_cols=88 Identities=8% Similarity=0.061 Sum_probs=64.2
Q ss_pred CCCCEE-EEEeCCCeEEEEEC--CCCeE-----EEEeCCCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCeeEEEEe
Q 006939 1 MSGYFH-FSGSADRTVKFWDL--ETFEL-----IGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVD 71 (625)
Q Consensus 1 PdG~lL-ASGS~D~tVkIWDL--~tg~~-----i~tl~~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~i~t~~ 71 (625)
|||+.| ++.+.++.|..||+ .++.. +..+..+......+++.++|+++++...+ .|.+||..+++.+..+.
T Consensus 158 pdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~ 237 (297)
T 3g4e_A 158 LDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVK 237 (297)
T ss_dssp TTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEE
T ss_pred CCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEE
Confidence 578755 56667889999987 55653 22333344567899999999888877666 89999999999988887
Q ss_pred ccCCceeEEEe--cCCCEE
Q 006939 72 VGWSRLSDLNV--HEGKLL 88 (625)
Q Consensus 72 ~~~s~v~~l~~--~dg~lL 88 (625)
.....+..+.| ++++.|
T Consensus 238 ~p~~~~t~~~f~g~d~~~L 256 (297)
T 3g4e_A 238 LPVDKTTSCCFGGKNYSEM 256 (297)
T ss_dssp CSSSBEEEEEEESGGGCEE
T ss_pred CCCCCceEEEEeCCCCCEE
Confidence 77666777777 455544
No 216
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=95.28 E-value=0.12 Score=55.03 Aligned_cols=100 Identities=10% Similarity=0.018 Sum_probs=69.2
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeCC---cEEEEeCCCCeeEEEE----ecc
Q 006939 1 MSGYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE---SLKVFSWEPIRCHDAV----DVG 73 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~D---sIrVWdl~sg~~i~t~----~~~ 73 (625)
|+|.++++...++.|+.||+.++......... .... ++|++++..|+.+..+ .|.+|+...+.....+ ...
T Consensus 140 ~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~-~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~ 217 (409)
T 3hrp_A 140 GNNTVLAYQRDDPRVRLISVDDNKVTTVHPGF-KGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTF 217 (409)
T ss_dssp STTEEEEEETTTTEEEEEETTTTEEEEEEETC-CBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTS
T ss_pred CCCCEEEEecCCCcEEEEECCCCEEEEeeccC-CCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeeccchh
Confidence 57888888888899999999988876555443 3334 9999999988877663 5888887655443333 112
Q ss_pred CCceeEEEe-c-CCCEEEEeeCCCeEEEEecc
Q 006939 74 WSRLSDLNV-H-EGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 74 ~s~v~~l~~-~-dg~lL~sg~~Dg~V~vWdv~ 103 (625)
...+..+.+ + ++.+++ +..++.|..||.+
T Consensus 218 ~~~p~~iav~p~~g~lyv-~d~~~~I~~~d~~ 248 (409)
T 3hrp_A 218 SGKIGAVALDETEEWLYF-VDSNKNFGRFNVK 248 (409)
T ss_dssp CSCCCBCEECTTSSEEEE-ECTTCEEEEEETT
T ss_pred cCCcEEEEEeCCCCeEEE-EECCCcEEEEECC
Confidence 344556676 4 454445 6667889999876
No 217
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=95.25 E-value=0.13 Score=58.60 Aligned_cols=100 Identities=8% Similarity=-0.006 Sum_probs=71.4
Q ss_pred CEEEEEeCCCeEEEEECCCCeEEEEeCCCC-----------CCe------------------------EEEEEcCCCCEE
Q 006939 4 YFHFSGSADRTVKFWDLETFELIGSAGPET-----------SGV------------------------RCLTFNPDGRTL 48 (625)
Q Consensus 4 ~lLASGS~D~tVkIWDL~tg~~i~tl~~h~-----------~~V------------------------~sv~fsPdg~~L 48 (625)
..++.++.++.|.++|..+|+.+..+.... ..+ ..++|+|++.++
T Consensus 328 ~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~ 407 (677)
T 1kb0_A 328 KVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLV 407 (677)
T ss_dssp EEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEE
T ss_pred eEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEE
Confidence 678899999999999999999987653210 001 146788988777
Q ss_pred EEEeC--------------------------------------------CcEEEEeCCCCeeEEEEeccCCceeEEEecC
Q 006939 49 LCGLH--------------------------------------------ESLKVFSWEPIRCHDAVDVGWSRLSDLNVHE 84 (625)
Q Consensus 49 vSgs~--------------------------------------------DsIrVWdl~sg~~i~t~~~~~s~v~~l~~~d 84 (625)
+.... +.|..||+.+++....+..+...........
T Consensus 408 yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~~~ 487 (677)
T 1kb0_A 408 YLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVSPWNGGTLTTA 487 (677)
T ss_dssp EEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEESSSCCCCEEEET
T ss_pred EEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCCCCCCcCcceEeC
Confidence 76421 3689999999998877765432111122246
Q ss_pred CCEEEEeeCCCeEEEEecc
Q 006939 85 GKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 85 g~lL~sg~~Dg~V~vWdv~ 103 (625)
+.+++.+..|+.+++||..
T Consensus 488 g~~v~~g~~dg~l~a~D~~ 506 (677)
T 1kb0_A 488 GNVVFQGTADGRLVAYHAA 506 (677)
T ss_dssp TTEEEEECTTSEEEEEETT
T ss_pred CCEEEEECCCCcEEEEECC
Confidence 6778888999999999987
No 218
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=95.08 E-value=0.0071 Score=63.55 Aligned_cols=95 Identities=12% Similarity=-0.038 Sum_probs=50.3
Q ss_pred CCEEEEEeCCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCeeEEEEeccCCceeEEE
Q 006939 3 GYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVDVGWSRLSDLN 81 (625)
Q Consensus 3 G~lLASGS~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~i~t~~~~~s~v~~l~ 81 (625)
+..+++|+.|+.|..||..+|+.+..+..+. .+.+.|++..++.++.+ .|..||..+|+....+..+. .....
T Consensus 92 ~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~--~~~~~ 165 (369)
T 2hz6_A 92 DGILYMGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYFD--YAASL 165 (369)
T ss_dssp ---CCCCEEEEEEEEECCC--------------------------EEEEEEEEEEECCCSSSSSCCCEEEEEE--ECCBC
T ss_pred CCEEEEEeCCCEEEEEECCCCcEEEEecCCC----cccccccCCEEEEEecCCEEEEEECCCCCEEEeEeccc--ccCcc
Confidence 4567778889999999999999988776553 23456788888888877 99999999998765543211 11111
Q ss_pred ecC----CCEEEEeeCCCeEEEEecc
Q 006939 82 VHE----GKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 82 ~~d----g~lL~sg~~Dg~V~vWdv~ 103 (625)
+.. +..+..++.++.|..||..
T Consensus 166 ~~~~~~~~~~v~~~~~dg~v~a~d~~ 191 (369)
T 2hz6_A 166 PEDDVDYKMSHFVSNGDGLVVTVDSE 191 (369)
T ss_dssp CCCCTTCCCCEEEEETSCEEEEECTT
T ss_pred ccCCccccceEEEECCCCEEEEEECC
Confidence 212 1445567788999999986
No 219
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=94.94 E-value=0.21 Score=54.57 Aligned_cols=102 Identities=11% Similarity=0.089 Sum_probs=73.0
Q ss_pred CCCCEEEEEeCC------CeEEEEECCCCeEEEEeCCC--C-CCeEEEEEcCCCCEEEEEe-------------------
Q 006939 1 MSGYFHFSGSAD------RTVKFWDLETFELIGSAGPE--T-SGVRCLTFNPDGRTLLCGL------------------- 52 (625)
Q Consensus 1 PdG~lLASGS~D------~tVkIWDL~tg~~i~tl~~h--~-~~V~sv~fsPdg~~LvSgs------------------- 52 (625)
||| +++++..+ +.|.+.|..+++.++.+..- . ..-+.+.|+|+++++++..
T Consensus 147 pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~ 225 (462)
T 2ece_A 147 PDA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDR 225 (462)
T ss_dssp SSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHH
T ss_pred CCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhc
Confidence 677 66666555 78999999999999998622 1 2235688899999998874
Q ss_pred -CCcEEEEeCCCCeeEEEEeccC--CceeEEEe---cCCCEEEEee------CCCeEEEEecc
Q 006939 53 -HESLKVFSWEPIRCHDAVDVGW--SRLSDLNV---HEGKLLGCSY------NQSCVGVWVVD 103 (625)
Q Consensus 53 -~DsIrVWdl~sg~~i~t~~~~~--s~v~~l~~---~dg~lL~sg~------~Dg~V~vWdv~ 103 (625)
.|.|.+||+.+++.+.++.++- .....+.| ++++++.++. .++.|.+|..+
T Consensus 226 ~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d 288 (462)
T 2ece_A 226 YGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYE 288 (462)
T ss_dssp SCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEE
T ss_pred cCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEec
Confidence 2489999999998888887752 22233433 5788775554 55688877665
No 220
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=94.91 E-value=0.3 Score=51.93 Aligned_cols=99 Identities=11% Similarity=-0.008 Sum_probs=68.0
Q ss_pred CCCEEEEEeCCCeEEEEECCCCeEEEEeCCC---------------CCCeEEEEEcCCCCEEEEEe-CC-cEEEEeCCCC
Q 006939 2 SGYFHFSGSADRTVKFWDLETFELIGSAGPE---------------TSGVRCLTFNPDGRTLLCGL-HE-SLKVFSWEPI 64 (625)
Q Consensus 2 dG~lLASGS~D~tVkIWDL~tg~~i~tl~~h---------------~~~V~sv~fsPdg~~LvSgs-~D-sIrVWdl~sg 64 (625)
++.++++-..++.|..||.... +..+.++ ......++|.++|.++++-. .+ .|++|++..+
T Consensus 278 ~g~lyv~d~~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G 355 (409)
T 3hrp_A 278 DSNFYMSDQNLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDG 355 (409)
T ss_dssp TTEEEEEETTTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTT
T ss_pred CCEEEEEeCCCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCC
Confidence 4777788888889999987643 2233222 23478999999999777776 56 8999998777
Q ss_pred eeEEEEec--------------cCCceeEEEe-cCCCEEEEeeCCCeEEEEec
Q 006939 65 RCHDAVDV--------------GWSRLSDLNV-HEGKLLGCSYNQSCVGVWVV 102 (625)
Q Consensus 65 ~~i~t~~~--------------~~s~v~~l~~-~dg~lL~sg~~Dg~V~vWdv 102 (625)
........ .+.....+++ +++.++++-..++.|+.+.+
T Consensus 356 ~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 356 YVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp EEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred EEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 65433221 1344566777 56777777777777777654
No 221
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=94.80 E-value=0.14 Score=51.97 Aligned_cols=98 Identities=17% Similarity=0.036 Sum_probs=66.6
Q ss_pred CCCEEEEEeCCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeC-C-cEEEEeCCCCeeEEEEeccCCceeE
Q 006939 2 SGYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLH-E-SLKVFSWEPIRCHDAVDVGWSRLSD 79 (625)
Q Consensus 2 dG~lLASGS~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~-D-sIrVWdl~sg~~i~t~~~~~s~v~~ 79 (625)
++.++.+.+.++.|+.+|+++++.+..+ - ....+.....+++..|+...+ + .+.+||..+.+.+..+...... ..
T Consensus 64 ~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l-~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~~eG-wG 140 (268)
T 3nok_A 64 QGHFFESTGHQGTLRQLSLESAQPVWME-R-LGNIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQRERTTRYSGEG-WG 140 (268)
T ss_dssp TTEEEEEETTTTEEEECCSSCSSCSEEE-E-CTTCCEEEEEECSSCEEEEESSSCEEEEEETTTTEEEEEEECSSCC-CC
T ss_pred CCEEEEEcCCCCEEEEEECCCCcEEeEE-C-CCCcceeEEEEeCCEEEEEEccCCEEEEEECCcCcEEEEEeCCCce-eE
Confidence 4667888899999999999999987776 2 233344333345555554443 4 8999999999998888643211 12
Q ss_pred EEecCCCEEEEeeCCCeEEEEecc
Q 006939 80 LNVHEGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 80 l~~~dg~lL~sg~~Dg~V~vWdv~ 103 (625)
+. ++++.|..+..++.|.++|..
T Consensus 141 Lt-~Dg~~L~vSdGs~~l~~iDp~ 163 (268)
T 3nok_A 141 LC-YWNGKLVRSDGGTMLTFHEPD 163 (268)
T ss_dssp EE-EETTEEEEECSSSEEEEECTT
T ss_pred Ee-cCCCEEEEECCCCEEEEEcCC
Confidence 22 456666666567889998876
No 222
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=94.75 E-value=0.29 Score=49.59 Aligned_cols=99 Identities=13% Similarity=-0.046 Sum_probs=65.4
Q ss_pred CCCCEEEEEeC--CCeEEEEECCCCeEEEEeCCCC-CCeEEEEEcCCCCEEEEEeC-C-cEEEEeCCCCeeEEEEecc-C
Q 006939 1 MSGYFHFSGSA--DRTVKFWDLETFELIGSAGPET-SGVRCLTFNPDGRTLLCGLH-E-SLKVFSWEPIRCHDAVDVG-W 74 (625)
Q Consensus 1 PdG~lLASGS~--D~tVkIWDL~tg~~i~tl~~h~-~~V~sv~fsPdg~~LvSgs~-D-sIrVWdl~sg~~i~t~~~~-~ 74 (625)
|||.++++.+. +..|.++|+.+++.+..+..-. .....+.+ ++..++.+.+ + .+.++|..+++.+..+..+ .
T Consensus 30 ~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~--~g~~lyv~t~~~~~v~viD~~t~~v~~~i~~g~~ 107 (266)
T 2iwa_A 30 ENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTL--LNEKLYQVVWLKNIGFIYDRRTLSNIKNFTHQMK 107 (266)
T ss_dssp STTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEE--ETTEEEEEETTCSEEEEEETTTTEEEEEEECCSS
T ss_pred CCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEE--eCCEEEEEEecCCEEEEEECCCCcEEEEEECCCC
Confidence 35666666654 6799999999999988864211 12223444 4556665554 4 8999999999998888655 2
Q ss_pred CceeEEEecCCCEEEEeeCCCeEEEEecc
Q 006939 75 SRLSDLNVHEGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 75 s~v~~l~~~dg~lL~sg~~Dg~V~vWdv~ 103 (625)
.. ..+. ++++.|..+..++.|.++|..
T Consensus 108 ~g-~glt-~Dg~~l~vs~gs~~l~viD~~ 134 (266)
T 2iwa_A 108 DG-WGLA-TDGKILYGSDGTSILYEIDPH 134 (266)
T ss_dssp SC-CEEE-ECSSSEEEECSSSEEEEECTT
T ss_pred Ce-EEEE-ECCCEEEEECCCCeEEEEECC
Confidence 21 2233 466655555567889888876
No 223
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=94.63 E-value=0.13 Score=55.72 Aligned_cols=101 Identities=16% Similarity=0.095 Sum_probs=71.1
Q ss_pred CCCCEEEEEe----------CCCeEEEEECCCCeEEEEeCCC-------CCCeEEEEEcCCCCEEEEEeC--C-cEEEEe
Q 006939 1 MSGYFHFSGS----------ADRTVKFWDLETFELIGSAGPE-------TSGVRCLTFNPDGRTLLCGLH--E-SLKVFS 60 (625)
Q Consensus 1 PdG~lLASGS----------~D~tVkIWDL~tg~~i~tl~~h-------~~~V~sv~fsPdg~~LvSgs~--D-sIrVWd 60 (625)
|||++|+.+. .+++|.++|..+++.+..+..- ......+.|+|||++++.+.. + .|.|.|
T Consensus 127 pDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID 206 (426)
T 3c75_H 127 EDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVD 206 (426)
T ss_dssp TTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEE
T ss_pred CCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEE
Confidence 6888887775 3678999999999998776321 234567899999999987753 4 799999
Q ss_pred CCCCeeEEEEeccCCceeEEEecCCCEEEEeeCCCeEEEEecc
Q 006939 61 WEPIRCHDAVDVGWSRLSDLNVHEGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 61 l~sg~~i~t~~~~~s~v~~l~~~dg~lL~sg~~Dg~V~vWdv~ 103 (625)
..+++.+..+.+... ..+.......+++.+.||.+.+.+..
T Consensus 207 ~~t~kvv~~I~v~g~--~~~~p~g~~~~v~~~~dG~~~~V~~~ 247 (426)
T 3c75_H 207 LEGKTFDRMLDVPDC--YHIFPASPTVFYMNCRDGSLARVDFA 247 (426)
T ss_dssp TTTTEEEEEEECCSE--EEEEEEETTEEEEEETTSSEEEEECC
T ss_pred CCCCeEEEEEEcCCc--eeeccCCCcEEEEEcCCCCEEEEECC
Confidence 999999888776432 12221223555556667777776653
No 224
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=94.60 E-value=0.25 Score=49.48 Aligned_cols=100 Identities=12% Similarity=0.053 Sum_probs=65.2
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCeEEEEeC---CC-CCCeEEEEEcCCCCEEEE----EeC-------------C-cEEE
Q 006939 1 MSGYFHFSGSADRTVKFWDLETFELIGSAG---PE-TSGVRCLTFNPDGRTLLC----GLH-------------E-SLKV 58 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~tg~~i~tl~---~h-~~~V~sv~fsPdg~~LvS----gs~-------------D-sIrV 58 (625)
++|+++++...++.|.+||.. ++...... +. ...+..+.+.++|+++++ |.. . .|..
T Consensus 95 ~dG~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~ 173 (305)
T 3dr2_A 95 AQQRLVHCEHGRRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYR 173 (305)
T ss_dssp TTSCEEEEETTTTEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEE
T ss_pred CCCCEEEEECCCCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEE
Confidence 578887777667889999986 65432221 11 234678999999999886 331 2 5677
Q ss_pred EeCCCCeeEEEEeccCCceeEEEe-cCCCEEEEeeCC------CeEEEEecc
Q 006939 59 FSWEPIRCHDAVDVGWSRLSDLNV-HEGKLLGCSYNQ------SCVGVWVVD 103 (625)
Q Consensus 59 Wdl~sg~~i~t~~~~~s~v~~l~~-~dg~lL~sg~~D------g~V~vWdv~ 103 (625)
||..+++..... +......+.+ ++++.|..+... +.|.+|+++
T Consensus 174 ~d~~~g~~~~~~--~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~ 223 (305)
T 3dr2_A 174 LPPDGSPLQRMA--DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWR 223 (305)
T ss_dssp ECSSSCCCEEEE--EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEE
T ss_pred EcCCCCcEEEEe--cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEec
Confidence 777666654433 3334456666 788866555444 688888876
No 225
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=94.60 E-value=0.37 Score=55.06 Aligned_cols=99 Identities=14% Similarity=0.035 Sum_probs=69.3
Q ss_pred EEEEEeCCCeEEEEECCCCeEEEEeCCCC-------------------------------------C--CeEEEEEcCCC
Q 006939 5 FHFSGSADRTVKFWDLETFELIGSAGPET-------------------------------------S--GVRCLTFNPDG 45 (625)
Q Consensus 5 lLASGS~D~tVkIWDL~tg~~i~tl~~h~-------------------------------------~--~V~sv~fsPdg 45 (625)
.++.++.++.+.+||..+|+++....... + .-..++|+|+.
T Consensus 321 ~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~ 400 (689)
T 1yiq_A 321 VLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDT 400 (689)
T ss_dssp EEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTT
T ss_pred EEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCC
Confidence 68889999999999999999874321100 0 01126788887
Q ss_pred CEEEEEe---------------------------------------------CC-cEEEEeCCCCeeEEEEeccCCceeE
Q 006939 46 RTLLCGL---------------------------------------------HE-SLKVFSWEPIRCHDAVDVGWSRLSD 79 (625)
Q Consensus 46 ~~LvSgs---------------------------------------------~D-sIrVWdl~sg~~i~t~~~~~s~v~~ 79 (625)
.+++... .+ .|..||+.+|+....+..+......
T Consensus 401 ~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g 480 (689)
T 1yiq_A 401 GLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTIFNGG 480 (689)
T ss_dssp TEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESSSCCCC
T ss_pred CEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCCCccCc
Confidence 7776541 12 6999999999988777654322222
Q ss_pred EEecCCCEEEEeeCCCeEEEEecc
Q 006939 80 LNVHEGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 80 l~~~dg~lL~sg~~Dg~V~vWdv~ 103 (625)
.....+.+++.+..|+.|+.||.+
T Consensus 481 ~~~tagglvf~gt~dg~l~a~D~~ 504 (689)
T 1yiq_A 481 TLSTAGNLVFEGSADGRVIAYAAD 504 (689)
T ss_dssp EEEETTTEEEEECTTSEEEEEETT
T ss_pred cceECCCEEEEECCCCcEEEEECC
Confidence 222467788889999999999988
No 226
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=94.46 E-value=0.32 Score=53.03 Aligned_cols=103 Identities=17% Similarity=0.226 Sum_probs=69.0
Q ss_pred CCCCEEEEEe-------------------CCCeEEEEECCCCeEEEEeCC--CCCCeEEEEE--cCCCCEEEEEeC----
Q 006939 1 MSGYFHFSGS-------------------ADRTVKFWDLETFELIGSAGP--ETSGVRCLTF--NPDGRTLLCGLH---- 53 (625)
Q Consensus 1 PdG~lLASGS-------------------~D~tVkIWDL~tg~~i~tl~~--h~~~V~sv~f--sPdg~~LvSgs~---- 53 (625)
|+++.+++.. .+.+|.+||+.+++.+.++.. .....+-+.| +|++++++.+..
T Consensus 197 p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~ 276 (462)
T 2ece_A 197 LPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLK 276 (462)
T ss_dssp TTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETT
T ss_pred CCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeecc
Confidence 5677777764 368999999999988887754 2234566666 999998887664
Q ss_pred --C-cEEEEeCCCCeeE--EEEec-----c-------------CCceeEEEe-cCCCEEEEe-eCCCeEEEEecc
Q 006939 54 --E-SLKVFSWEPIRCH--DAVDV-----G-------------WSRLSDLNV-HEGKLLGCS-YNQSCVGVWVVD 103 (625)
Q Consensus 54 --D-sIrVWdl~sg~~i--~t~~~-----~-------------~s~v~~l~~-~dg~lL~sg-~~Dg~V~vWdv~ 103 (625)
+ +|.+|.++.+... .++.. . .....+|.+ ++|++|.++ ...+.|.+||+.
T Consensus 277 ~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~ 351 (462)
T 2ece_A 277 DLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDIS 351 (462)
T ss_dssp TCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECS
T ss_pred CCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEec
Confidence 3 7877776655321 12110 0 133566776 788887444 446799999985
No 227
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=94.44 E-value=0.35 Score=48.93 Aligned_cols=99 Identities=12% Similarity=0.027 Sum_probs=67.5
Q ss_pred CCCEEEEEeCCC--eEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeC-C-cEEEEeCCCCeeEEEEeccCCce
Q 006939 2 SGYFHFSGSADR--TVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLH-E-SLKVFSWEPIRCHDAVDVGWSRL 77 (625)
Q Consensus 2 dG~lLASGS~D~--tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~-D-sIrVWdl~sg~~i~t~~~~~s~v 77 (625)
++.++.+++.++ .|+.+|+.+++.+..+..- ...+...+.+++..|+...+ + .+.+||..+.+.+..+......
T Consensus 52 ~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~-~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~eG- 129 (262)
T 3nol_A 52 NGYFYESTGLNGRSSIRKVDIESGKTLQQIELG-KRYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVRSFNYDGEG- 129 (262)
T ss_dssp TTEEEEEEEETTEEEEEEECTTTCCEEEEEECC-TTCCEEEEEEETTEEEEEESSSSEEEEEETTTCCEEEEEECSSCC-
T ss_pred CCEEEEECCCCCCceEEEEECCCCcEEEEEecC-CccceeEEEEeCCEEEEEEeeCCEEEEEECccCcEEEEEECCCCc-
Confidence 467778888876 8999999999998887543 33444434445666665554 3 8999999999998888653211
Q ss_pred eEEEecCCCEEEEeeCCCeEEEEecc
Q 006939 78 SDLNVHEGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 78 ~~l~~~dg~lL~sg~~Dg~V~vWdv~ 103 (625)
..+. ++++.|..+..++.|.++|..
T Consensus 130 ~glt-~dg~~L~~SdGs~~i~~iDp~ 154 (262)
T 3nol_A 130 WGLT-HNDQYLIMSDGTPVLRFLDPE 154 (262)
T ss_dssp CCEE-ECSSCEEECCSSSEEEEECTT
T ss_pred eEEe-cCCCEEEEECCCCeEEEEcCC
Confidence 1223 355655555556788888876
No 228
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=94.31 E-value=0.63 Score=47.25 Aligned_cols=102 Identities=13% Similarity=0.079 Sum_probs=60.6
Q ss_pred CCCCEEEEEeCC----CeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEE-eCC-cEEEEeCC--CC-ee-----
Q 006939 1 MSGYFHFSGSAD----RTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCG-LHE-SLKVFSWE--PI-RC----- 66 (625)
Q Consensus 1 PdG~lLASGS~D----~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSg-s~D-sIrVWdl~--sg-~~----- 66 (625)
|+|.++++...+ ....||.+.+++... +..+......++|+|||+.++.+ ..+ .|.+|++. ++ ..
T Consensus 143 ~~G~l~v~~~~~~~~~~~~~l~~~~~g~~~~-~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~ 221 (326)
T 2ghs_A 143 PSGALWIGTMGRKAETGAGSIYHVAKGKVTK-LFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEV 221 (326)
T ss_dssp TTSCEEEEEEETTCCTTCEEEEEEETTEEEE-EEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEE
T ss_pred CCCCEEEEeCCCcCCCCceEEEEEeCCcEEE-eeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceE
Confidence 577777765422 233444433555433 22233456789999999876544 444 89999986 55 32
Q ss_pred EEEEeccCCceeEEEe-cCCCEEEEeeCCCeEEEEecc
Q 006939 67 HDAVDVGWSRLSDLNV-HEGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 67 i~t~~~~~s~v~~l~~-~dg~lL~sg~~Dg~V~vWdv~ 103 (625)
+..+.........+.+ .+|.++++...++.|..|+.+
T Consensus 222 ~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~~ 259 (326)
T 2ghs_A 222 FIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDTD 259 (326)
T ss_dssp EEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECTT
T ss_pred EEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECCC
Confidence 1111111223455666 578888877777889999765
No 229
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=94.11 E-value=0.16 Score=52.20 Aligned_cols=99 Identities=11% Similarity=0.075 Sum_probs=65.0
Q ss_pred CCEEEEEe---CCCeEEEEECCCCeEEEEeCCCC-----------------------------CCeEEEEEcCCCCEEEE
Q 006939 3 GYFHFSGS---ADRTVKFWDLETFELIGSAGPET-----------------------------SGVRCLTFNPDGRTLLC 50 (625)
Q Consensus 3 G~lLASGS---~D~tVkIWDL~tg~~i~tl~~h~-----------------------------~~V~sv~fsPdg~~LvS 50 (625)
|.++++.. .++.|.+||+.+++..+.+.+|. ..+..|+|+|||++|+.
T Consensus 132 g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~ 211 (343)
T 2qe8_A 132 NFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYL 211 (343)
T ss_dssp TEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEE
T ss_pred CEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEE
Confidence 45566666 68899999999888877665431 23678999999998887
Q ss_pred EeCC--cEEEEeCC---CCe-----e---EEEEeccCCceeEEEe-cCCCEEEEeeCCCeEEEEec
Q 006939 51 GLHE--SLKVFSWE---PIR-----C---HDAVDVGWSRLSDLNV-HEGKLLGCSYNQSCVGVWVV 102 (625)
Q Consensus 51 gs~D--sIrVWdl~---sg~-----~---i~t~~~~~s~v~~l~~-~dg~lL~sg~~Dg~V~vWdv 102 (625)
+..+ .|..++.. .+. . +... .+......+.+ ++|.++++...++.|.+||.
T Consensus 212 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~ 276 (343)
T 2qe8_A 212 SPMHSTSMYRIKSADLSNLQLTDAELGSKIERY-SEKPICDGISIDKDHNIYVGDLAHSAIGVITS 276 (343)
T ss_dssp EESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEE-EECCSCSCEEECTTCCEEEEEGGGTEEEEEET
T ss_pred EeCCCCeEEEEEHHHhcCCCCChhhhhcceEec-ccCCCCceEEECCCCCEEEEccCCCeEEEEEC
Confidence 7655 34444321 110 0 0111 11223344666 68888899888899999998
No 230
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=93.86 E-value=0.39 Score=48.07 Aligned_cols=87 Identities=15% Similarity=0.086 Sum_probs=58.7
Q ss_pred CCCC-EEEEEeCCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCeeEEEEec----cC
Q 006939 1 MSGY-FHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVDV----GW 74 (625)
Q Consensus 1 PdG~-lLASGS~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~i~t~~~----~~ 74 (625)
|+|+ +++++..++.|..|+. +++ +..+..+...+..+.|.++|+++++...+ .|.+|+.. +........ ..
T Consensus 54 ~~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~ 130 (305)
T 3dr2_A 54 EAQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAHLLVGRYAGKRL 130 (305)
T ss_dssp GGGTEEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECEETTEEC
T ss_pred CCCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CCEEEEEeccCCCcc
Confidence 4666 7788888899999998 455 34444456778999999999977665554 79999986 554322211 11
Q ss_pred CceeEEEe-cCCCEEEE
Q 006939 75 SRLSDLNV-HEGKLLGC 90 (625)
Q Consensus 75 s~v~~l~~-~dg~lL~s 90 (625)
..+.++.+ ++|.++++
T Consensus 131 ~~~~~i~~d~dG~l~~t 147 (305)
T 3dr2_A 131 NSPNDLIVARDGAIWFT 147 (305)
T ss_dssp SCCCCEEECTTSCEEEE
T ss_pred CCCCCEEECCCCCEEEe
Confidence 23455666 67777775
No 231
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=93.77 E-value=0.92 Score=46.03 Aligned_cols=87 Identities=10% Similarity=0.009 Sum_probs=58.8
Q ss_pred CCCCEE-EEEeCCCeEEEEECC--CC-e-----EEEEeCCCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCeeEEEE
Q 006939 1 MSGYFH-FSGSADRTVKFWDLE--TF-E-----LIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAV 70 (625)
Q Consensus 1 PdG~lL-ASGS~D~tVkIWDL~--tg-~-----~i~tl~~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~i~t~ 70 (625)
|||+.| ++.+.++.|.+||+. ++ . .+..+..+...+..+++.++|.++++...+ .|.+|+. .++.+..+
T Consensus 188 ~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i 266 (326)
T 2ghs_A 188 PDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARY 266 (326)
T ss_dssp TTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEE
T ss_pred CCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEE
Confidence 578755 455567899999986 56 3 233344444567889999999887776555 8999998 56666666
Q ss_pred eccCCceeEEEe--cCCCEE
Q 006939 71 DVGWSRLSDLNV--HEGKLL 88 (625)
Q Consensus 71 ~~~~s~v~~l~~--~dg~lL 88 (625)
......+..+.| +++..|
T Consensus 267 ~~~~~~~~~~af~g~d~~~L 286 (326)
T 2ghs_A 267 EVPGKQTTCPAFIGPDASRL 286 (326)
T ss_dssp ECSCSBEEEEEEESTTSCEE
T ss_pred ECCCCCcEEEEEecCCCCEE
Confidence 655555666666 344444
No 232
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=93.59 E-value=0.97 Score=45.12 Aligned_cols=98 Identities=14% Similarity=-0.027 Sum_probs=65.1
Q ss_pred CCEEEEEeCCC--eEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeC-C-cEEEEeCCCCeeEEEEeccCCcee
Q 006939 3 GYFHFSGSADR--TVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLH-E-SLKVFSWEPIRCHDAVDVGWSRLS 78 (625)
Q Consensus 3 G~lLASGS~D~--tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~-D-sIrVWdl~sg~~i~t~~~~~s~v~ 78 (625)
+.++.+.+.++ .|+.+|+.+++.+..+..- ...+......++..|+...+ + .+.+||..+.+.+.++...... .
T Consensus 31 ~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~-~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~~~G-w 108 (243)
T 3mbr_X 31 GHLYESTGETGRSSVRKVDLETGRILQRAEVP-PPYFGAGIVAWRDRLIQLTWRNHEGFVYDLATLTPRARFRYPGEG-W 108 (243)
T ss_dssp TEEEEEECCTTSCEEEEEETTTCCEEEEEECC-TTCCEEEEEEETTEEEEEESSSSEEEEEETTTTEEEEEEECSSCC-C
T ss_pred CEEEEECCCCCCceEEEEECCCCCEEEEEeCC-CCcceeEEEEeCCEEEEEEeeCCEEEEEECCcCcEEEEEeCCCCc-e
Confidence 56777777764 8999999999998876432 22333333334555555554 3 8999999999999888654322 2
Q ss_pred EEEecCCCEEEEeeCCCeEEEEecc
Q 006939 79 DLNVHEGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 79 ~l~~~dg~lL~sg~~Dg~V~vWdv~ 103 (625)
.+. ++++.|..+..++.|.++|..
T Consensus 109 glt-~dg~~L~vSdgs~~l~~iDp~ 132 (243)
T 3mbr_X 109 ALT-SDDSHLYMSDGTAVIRKLDPD 132 (243)
T ss_dssp EEE-ECSSCEEEECSSSEEEEECTT
T ss_pred EEe-eCCCEEEEECCCCeEEEEeCC
Confidence 233 455555555557889888876
No 233
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=93.30 E-value=0.85 Score=46.22 Aligned_cols=98 Identities=12% Similarity=-0.026 Sum_probs=68.9
Q ss_pred CCEEEEEeCCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCeeEEEEeccC-----Cc
Q 006939 3 GYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVDVGW-----SR 76 (625)
Q Consensus 3 G~lLASGS~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~i~t~~~~~-----s~ 76 (625)
+++....-.++.+.+||..+++.+.++..-..+ ..++ +|+..|+....+ .|.++|..+.+....+.+.. ..
T Consensus 106 ~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~~eG-wGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~ 182 (268)
T 3nok_A 106 ERLYQLTWTEGLLFTWSGMPPQRERTTRYSGEG-WGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVEL 182 (268)
T ss_dssp SCEEEEESSSCEEEEEETTTTEEEEEEECSSCC-CCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCC
T ss_pred CEEEEEEccCCEEEEEECCcCcEEEEEeCCCce-eEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCccccc
Confidence 345555567889999999999999887643222 2333 467776655434 89999999998887776532 23
Q ss_pred eeEEEecCCCEEEEeeCCCeEEEEecc
Q 006939 77 LSDLNVHEGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 77 v~~l~~~dg~lL~sg~~Dg~V~vWdv~ 103 (625)
+..+.+.+|++.+..+.+..|.+-|..
T Consensus 183 lNeLe~~dG~lyanvw~s~~I~vIDp~ 209 (268)
T 3nok_A 183 INELECANGVIYANIWHSSDVLEIDPA 209 (268)
T ss_dssp EEEEEEETTEEEEEETTCSEEEEECTT
T ss_pred ccccEEeCCEEEEEECCCCeEEEEeCC
Confidence 455566678877777777888888776
No 234
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=93.20 E-value=1 Score=45.53 Aligned_cols=97 Identities=14% Similarity=0.166 Sum_probs=67.5
Q ss_pred CEEEEEeCCCeEEEEECCCCeEEEEeCCC-CCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCeeEEEEeccCC-----c
Q 006939 4 YFHFSGSADRTVKFWDLETFELIGSAGPE-TSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVDVGWS-----R 76 (625)
Q Consensus 4 ~lLASGS~D~tVkIWDL~tg~~i~tl~~h-~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~i~t~~~~~s-----~ 76 (625)
++.++.-.++.+.++|..+++.+.++..- ..+ +.+.+||..++.+..+ .|.++|..+.+....+.++.. .
T Consensus 77 ~lyv~t~~~~~v~viD~~t~~v~~~i~~g~~~g---~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~ 153 (266)
T 2iwa_A 77 KLYQVVWLKNIGFIYDRRTLSNIKNFTHQMKDG---WGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIR 153 (266)
T ss_dssp EEEEEETTCSEEEEEETTTTEEEEEEECCSSSC---CEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCC
T ss_pred EEEEEEecCCEEEEEECCCCcEEEEEECCCCCe---EEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCccccc
Confidence 44455557889999999999999887422 222 3355677766654444 899999999888877765432 2
Q ss_pred eeEEEecCCCEEEEeeCCCeEEEEecc
Q 006939 77 LSDLNVHEGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 77 v~~l~~~dg~lL~sg~~Dg~V~vWdv~ 103 (625)
+..+.+.++.+.+....++.|.+-|..
T Consensus 154 ~nele~~dg~lyvn~~~~~~V~vID~~ 180 (266)
T 2iwa_A 154 LNELEYINGEVWANIWQTDCIARISAK 180 (266)
T ss_dssp EEEEEEETTEEEEEETTSSEEEEEETT
T ss_pred ceeEEEECCEEEEecCCCCeEEEEECC
Confidence 445555577766777677888888876
No 235
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=92.84 E-value=1.2 Score=44.50 Aligned_cols=98 Identities=15% Similarity=0.118 Sum_probs=67.8
Q ss_pred CCEEEEEeCCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEE-EEEeCCcEEEEeCCCCeeEEEEeccC-----Cc
Q 006939 3 GYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTL-LCGLHESLKVFSWEPIRCHDAVDVGW-----SR 76 (625)
Q Consensus 3 G~lLASGS~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~L-vSgs~DsIrVWdl~sg~~i~t~~~~~-----s~ 76 (625)
+++....-.++.+.+||..+++.+.++..-..+ ..++ +|+..| +|-+.+.|.++|..+.+....+.+.. ..
T Consensus 75 ~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~~~G-wglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~ 151 (243)
T 3mbr_X 75 DRLIQLTWRNHEGFVYDLATLTPRARFRYPGEG-WALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDN 151 (243)
T ss_dssp TEEEEEESSSSEEEEEETTTTEEEEEEECSSCC-CEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCC
T ss_pred CEEEEEEeeCCEEEEEECCcCcEEEEEeCCCCc-eEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCccccc
Confidence 344555567889999999999999887643333 3444 456544 44443389999999998887776532 33
Q ss_pred eeEEEecCCCEEEEeeCCCeEEEEecc
Q 006939 77 LSDLNVHEGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 77 v~~l~~~dg~lL~sg~~Dg~V~vWdv~ 103 (625)
+..+.+.+|++.+..+.+..|.+.|..
T Consensus 152 lNeLe~~~G~lyanvw~s~~I~vIDp~ 178 (243)
T 3mbr_X 152 LNELEWVNGELLANVWLTSRIARIDPA 178 (243)
T ss_dssp EEEEEEETTEEEEEETTTTEEEEECTT
T ss_pred ceeeEEeCCEEEEEECCCCeEEEEECC
Confidence 455555678877777777788888776
No 236
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=92.80 E-value=0.8 Score=46.27 Aligned_cols=97 Identities=11% Similarity=0.124 Sum_probs=66.9
Q ss_pred CEEEEEeCCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEe-CCcEEEEeCCCCeeEEEEeccC-----Cce
Q 006939 4 YFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGL-HESLKVFSWEPIRCHDAVDVGW-----SRL 77 (625)
Q Consensus 4 ~lLASGS~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs-~DsIrVWdl~sg~~i~t~~~~~-----s~v 77 (625)
++....-.++.+.+||..+++.+.++.....+ ..+ .+|+..|+... .+.|.++|..+.+....+.+.. ..+
T Consensus 98 ~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~eG-~gl--t~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~l 174 (262)
T 3nol_A 98 KIVGLTWKNGLGFVWNIRNLRQVRSFNYDGEG-WGL--THNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPEL 174 (262)
T ss_dssp EEEEEESSSSEEEEEETTTCCEEEEEECSSCC-CCE--EECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCE
T ss_pred EEEEEEeeCCEEEEEECccCcEEEEEECCCCc-eEE--ecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCcccccc
Confidence 34444456889999999999999887643222 223 34666555443 3389999999998887776532 233
Q ss_pred eEEEecCCCEEEEeeCCCeEEEEecc
Q 006939 78 SDLNVHEGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 78 ~~l~~~dg~lL~sg~~Dg~V~vWdv~ 103 (625)
+.+.+.+|++.+..+.+..|.+.|..
T Consensus 175 NELe~~~G~lyan~w~~~~I~vIDp~ 200 (262)
T 3nol_A 175 NELEWVDGEIFANVWQTNKIVRIDPE 200 (262)
T ss_dssp EEEEEETTEEEEEETTSSEEEEECTT
T ss_pred ceeEEECCEEEEEEccCCeEEEEECC
Confidence 45566678877777778888888876
No 237
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=92.60 E-value=0.72 Score=47.24 Aligned_cols=96 Identities=13% Similarity=-0.033 Sum_probs=61.7
Q ss_pred CCEEEEEeCCCeEEEEECCCCeEEEEeCC-CCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCeeEEEEeccCCcee-E
Q 006939 3 GYFHFSGSADRTVKFWDLETFELIGSAGP-ETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVDVGWSRLS-D 79 (625)
Q Consensus 3 G~lLASGS~D~tVkIWDL~tg~~i~tl~~-h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~i~t~~~~~s~v~-~ 79 (625)
+..+..++.++.|..||..+|+.+..... ....+....+ .+..++.+..+ .|.+||..+|+.+.........+. .
T Consensus 277 ~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~--~~~~l~v~~~~g~l~~~d~~tG~~~~~~~~~~~~~~~~ 354 (376)
T 3q7m_A 277 GNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVL--YNGNLVVGDSEGYLHWINVEDGRFVAQQKVDSSGFQTE 354 (376)
T ss_dssp TTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEECCTTCBCSC
T ss_pred CCEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEE--ECCEEEEEeCCCeEEEEECCCCcEEEEEecCCCcceeC
Confidence 44566777888899999999988776652 2222222222 24566667766 899999999998876665222221 2
Q ss_pred EEecCCCEEEEeeCCCeEEEEe
Q 006939 80 LNVHEGKLLGCSYNQSCVGVWV 101 (625)
Q Consensus 80 l~~~dg~lL~sg~~Dg~V~vWd 101 (625)
.... +..|..+..+|.|..|+
T Consensus 355 ~~~~-~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 355 PVAA-DGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp CEEE-TTEEEEEBTTSCEEEEE
T ss_pred CEEE-CCEEEEEeCCCEEEEEe
Confidence 2223 44566677788888886
No 238
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=92.31 E-value=1.5 Score=44.76 Aligned_cols=99 Identities=12% Similarity=-0.006 Sum_probs=64.9
Q ss_pred CCEEEEEeCCCeEEEEECCCCeEEEEeCCC---------CCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCeeEEEEec
Q 006939 3 GYFHFSGSADRTVKFWDLETFELIGSAGPE---------TSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVDV 72 (625)
Q Consensus 3 G~lLASGS~D~tVkIWDL~tg~~i~tl~~h---------~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~i~t~~~ 72 (625)
+..+..++.++.|..||..+|+.+..+... ...+.+.... ++..++.++.+ .|..+|..+|+.......
T Consensus 53 ~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~ 131 (376)
T 3q7m_A 53 DNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTV-SGGHVYIGSEKAQVYALNTSDGTVAWQTKV 131 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEE-ETTEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred CCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceE-eCCEEEEEcCCCEEEEEECCCCCEEEEEeC
Confidence 456677788899999999999987665442 1223222222 34456666666 899999999998876654
Q ss_pred cCCceeEEEecCCCEEEEeeCCCeEEEEecc
Q 006939 73 GWSRLSDLNVHEGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 73 ~~s~v~~l~~~dg~lL~sg~~Dg~V~vWdv~ 103 (625)
.........+.++ .+..+..++.|..+|..
T Consensus 132 ~~~~~~~p~~~~~-~v~v~~~~g~l~~~d~~ 161 (376)
T 3q7m_A 132 AGEALSRPVVSDG-LVLIHTSNGQLQALNEA 161 (376)
T ss_dssp SSCCCSCCEEETT-EEEEECTTSEEEEEETT
T ss_pred CCceEcCCEEECC-EEEEEcCCCeEEEEECC
Confidence 4322222222344 56667778889999875
No 239
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=91.95 E-value=0.39 Score=50.80 Aligned_cols=74 Identities=7% Similarity=-0.031 Sum_probs=55.4
Q ss_pred CCCCEEEEEeC---------CCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCC-EEEEEe-CC-cEEEEeCCCCeeEE
Q 006939 1 MSGYFHFSGSA---------DRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGR-TLLCGL-HE-SLKVFSWEPIRCHD 68 (625)
Q Consensus 1 PdG~lLASGS~---------D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~-~LvSgs-~D-sIrVWdl~sg~~i~ 68 (625)
|||..+..+.. +..+.+||+.+++.+..+.... ....+.|+|||+ .+++.. .+ +|.|+|..+++.+.
T Consensus 273 ~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~ 351 (368)
T 1mda_H 273 KNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH-DSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQS 351 (368)
T ss_dssp TTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEE
T ss_pred CCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCC-CcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEE
Confidence 46666665432 2356699999999988875432 578999999997 456665 35 99999999999998
Q ss_pred EEeccCC
Q 006939 69 AVDVGWS 75 (625)
Q Consensus 69 t~~~~~s 75 (625)
.+.++..
T Consensus 352 ~I~vg~~ 358 (368)
T 1mda_H 352 SVELDKG 358 (368)
T ss_dssp ECCCCSC
T ss_pred EEECCCC
Confidence 8876644
No 240
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=91.84 E-value=0.57 Score=52.78 Aligned_cols=102 Identities=13% Similarity=0.117 Sum_probs=67.5
Q ss_pred CCCEEEEEeCCC-----------eEEEEECCCCeEE--EEe-CCCCCCeEEEEEcCCCCEEEEEeCC--cEEEEeCCCCe
Q 006939 2 SGYFHFSGSADR-----------TVKFWDLETFELI--GSA-GPETSGVRCLTFNPDGRTLLCGLHE--SLKVFSWEPIR 65 (625)
Q Consensus 2 dG~lLASGS~D~-----------tVkIWDL~tg~~i--~tl-~~h~~~V~sv~fsPdg~~LvSgs~D--sIrVWdl~sg~ 65 (625)
+|++++.|+.+. .+.+||+.+++.. ..+ ..+.....++++..+|.+++.|+.+ .+.+||..+..
T Consensus 197 ~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~ 276 (656)
T 1k3i_A 197 SGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDS 276 (656)
T ss_dssp TTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGGTE
T ss_pred CCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEEecCcCCc
Confidence 788999988653 5889999887642 222 2233334457778899999999864 79999988776
Q ss_pred eEEEEeccCCc--eeEEEecCCCEEEEee-CC-----CeEEEEecc
Q 006939 66 CHDAVDVGWSR--LSDLNVHEGKLLGCSY-NQ-----SCVGVWVVD 103 (625)
Q Consensus 66 ~i~t~~~~~s~--v~~l~~~dg~lL~sg~-~D-----g~V~vWdv~ 103 (625)
....-...... .....++++++++.|+ .+ ..+.+||..
T Consensus 277 W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~ 322 (656)
T 1k3i_A 277 WIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPS 322 (656)
T ss_dssp EEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETT
T ss_pred eeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCC
Confidence 54432222111 1222335899998888 34 468888876
No 241
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=91.69 E-value=0.52 Score=53.04 Aligned_cols=88 Identities=15% Similarity=0.138 Sum_probs=61.1
Q ss_pred eEEEEECCC--CeE-EEEeCCCCCCeEEEEEcCCCCEEEEEeCC--cEEEEeCCCCe------------eEEEEeccCCc
Q 006939 14 TVKFWDLET--FEL-IGSAGPETSGVRCLTFNPDGRTLLCGLHE--SLKVFSWEPIR------------CHDAVDVGWSR 76 (625)
Q Consensus 14 tVkIWDL~t--g~~-i~tl~~h~~~V~sv~fsPdg~~LvSgs~D--sIrVWdl~sg~------------~i~t~~~~~s~ 76 (625)
.|.+.|..+ ++. +..+.. .....++.|+|||++++.++.. +|.|+|+.+.+ ....+..+..+
T Consensus 255 ~V~VID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP 333 (595)
T 1fwx_A 255 GVKVVDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGP 333 (595)
T ss_dssp TEEEEECSGGGCCSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCE
T ss_pred cEEEEeCcccCCceeEEEEec-CCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCc
Confidence 477888877 444 444422 1345688999999998877654 89999998642 23444555554
Q ss_pred eeEEEe-cCCCEEEEeeCCCeEEEEecc
Q 006939 77 LSDLNV-HEGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 77 v~~l~~-~dg~lL~sg~~Dg~V~vWdv~ 103 (625)
..+.| ++|...++..-|+.|.+||++
T Consensus 334 -~h~aF~~dG~aY~t~~ldsqV~kwdi~ 360 (595)
T 1fwx_A 334 -LHTAFDGRGNAYTSLFLDSQVVKWNIE 360 (595)
T ss_dssp -EEEEECTTSEEEEEETTTTEEEEEEHH
T ss_pred -ceEEECCCCeEEEEEecCCcEEEEEhh
Confidence 44555 688666788899999999987
No 242
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=91.63 E-value=2 Score=48.57 Aligned_cols=102 Identities=20% Similarity=0.043 Sum_probs=63.1
Q ss_pred CCCEEEEEeCCCe-------------EEEEECCCCe----EEEEeCC-CCCCeEEEEEcCCCCEEE-EEe---CC-cEEE
Q 006939 2 SGYFHFSGSADRT-------------VKFWDLETFE----LIGSAGP-ETSGVRCLTFNPDGRTLL-CGL---HE-SLKV 58 (625)
Q Consensus 2 dG~lLASGS~D~t-------------VkIWDL~tg~----~i~tl~~-h~~~V~sv~fsPdg~~Lv-Sgs---~D-sIrV 58 (625)
||+.|+-++.|.. |++|++.++. ++..... |...+..+.|+|||++|+ +.. .. .|.+
T Consensus 184 Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~ 263 (693)
T 3iuj_A 184 GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYV 263 (693)
T ss_dssp TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEE
T ss_pred CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEE
Confidence 6777887777743 9999998764 3433343 445578899999999875 333 23 6899
Q ss_pred EeCCCCe-eEEEEeccCCceeEEEec-CCCEEEEeeCC---CeEEEEecc
Q 006939 59 FSWEPIR-CHDAVDVGWSRLSDLNVH-EGKLLGCSYNQ---SCVGVWVVD 103 (625)
Q Consensus 59 Wdl~sg~-~i~t~~~~~s~v~~l~~~-dg~lL~sg~~D---g~V~vWdv~ 103 (625)
||+..+. ....+..+.........+ ++.+++.+..+ +.|..|+++
T Consensus 264 ~d~~~~~~~~~~l~~~~~~~~~~~~~~g~~l~~~t~~~~~~~~l~~~d~~ 313 (693)
T 3iuj_A 264 KDLSQENAPLLTVQGDLDADVSLVDNKGSTLYLLTNRDAPNRRLVTVDAA 313 (693)
T ss_dssp EETTSTTCCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETT
T ss_pred EECCCCCCceEEEeCCCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCC
Confidence 9987653 333444343333333334 44455555443 567777776
No 243
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=91.16 E-value=2.1 Score=47.63 Aligned_cols=100 Identities=13% Similarity=0.092 Sum_probs=66.8
Q ss_pred CEEEEEeCCCeEEEEECCCCeEEEEeCCCC-------------CCe--------------------------EEEEEcCC
Q 006939 4 YFHFSGSADRTVKFWDLETFELIGSAGPET-------------SGV--------------------------RCLTFNPD 44 (625)
Q Consensus 4 ~lLASGS~D~tVkIWDL~tg~~i~tl~~h~-------------~~V--------------------------~sv~fsPd 44 (625)
++++.++.++.+..+|..+|+.+..+.... .++ ..++|+|+
T Consensus 317 ~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~ 396 (571)
T 2ad6_A 317 PLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPE 396 (571)
T ss_dssp EEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETT
T ss_pred EEEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCC
Confidence 367788899999999999999876653211 111 23567887
Q ss_pred CCEEEEEe-------------------------------------CC-cEEEEeCCCCeeEEEEeccCCceeEEEecCCC
Q 006939 45 GRTLLCGL-------------------------------------HE-SLKVFSWEPIRCHDAVDVGWSRLSDLNVHEGK 86 (625)
Q Consensus 45 g~~LvSgs-------------------------------------~D-sIrVWdl~sg~~i~t~~~~~s~v~~l~~~dg~ 86 (625)
..+++... .+ .|..||..+++....+..............+.
T Consensus 397 ~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~~~~~~~~~t~gg 476 (571)
T 2ad6_A 397 SRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKFAAWGGTLYTKGG 476 (571)
T ss_dssp TTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEESSCCCSBCEEETTT
T ss_pred CCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEEecCCCCccceeEEECCC
Confidence 76666542 23 78899999999887765432211111122455
Q ss_pred EEEEeeCCCeEEEEecc
Q 006939 87 LLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 87 lL~sg~~Dg~V~vWdv~ 103 (625)
++..+..|+.|+.||..
T Consensus 477 ~v~~g~~dg~l~a~D~~ 493 (571)
T 2ad6_A 477 LVWYATLDGYLKALDNK 493 (571)
T ss_dssp EEEEECTTSEEEEEETT
T ss_pred EEEEEcCCCeEEEEECC
Confidence 66668889999999987
No 244
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=91.14 E-value=4.4 Score=39.23 Aligned_cols=101 Identities=12% Similarity=0.089 Sum_probs=61.2
Q ss_pred CCEEEEEeCCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeC-C-cEEEEeCCCCeeEEEEeccCCceeEE
Q 006939 3 GYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLH-E-SLKVFSWEPIRCHDAVDVGWSRLSDL 80 (625)
Q Consensus 3 G~lLASGS~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~-D-sIrVWdl~sg~~i~t~~~~~s~v~~l 80 (625)
+.++++-...+.|..+|+..+.....+.........+++.+++..++.+.. . .|.++++...........+......+
T Consensus 48 ~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i 127 (267)
T 1npe_A 48 KVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGI 127 (267)
T ss_dssp TEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEE
T ss_pred CEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEE
Confidence 455566666788999998765543333333356789999997665554443 4 89999987543322233333455677
Q ss_pred Ee-cC-CCEEEEeeC--CCeEEEEecc
Q 006939 81 NV-HE-GKLLGCSYN--QSCVGVWVVD 103 (625)
Q Consensus 81 ~~-~d-g~lL~sg~~--Dg~V~vWdv~ 103 (625)
.+ ++ +.++++... .+.|..++++
T Consensus 128 ~vd~~~g~lyv~~~~~~~~~I~~~~~d 154 (267)
T 1npe_A 128 VTDPVRGNLYWTDWNRDNPKIETSHMD 154 (267)
T ss_dssp EEETTTTEEEEEECCSSSCEEEEEETT
T ss_pred EEeeCCCEEEEEECCCCCcEEEEEecC
Confidence 77 43 444444433 3577777765
No 245
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=90.28 E-value=1.1 Score=50.87 Aligned_cols=61 Identities=15% Similarity=0.040 Sum_probs=47.6
Q ss_pred CeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCeeEEEEeccC
Q 006939 13 RTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVDVGW 74 (625)
Q Consensus 13 ~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~i~t~~~~~ 74 (625)
+.|..||+.+++.+..+... ..+....+..++.+++.++.| .+++||..+|+.+..+..+.
T Consensus 457 g~l~A~D~~tG~~~W~~~~~-~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~ 518 (677)
T 1kb0_A 457 GRLLAWDPVAQKAAWSVEHV-SPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGT 518 (677)
T ss_dssp EEEEEEETTTTEEEEEEEES-SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred cEEEEEeCCCCcEEeecCCC-CCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCC
Confidence 68999999999988776532 334444466678888888887 99999999999998887553
No 246
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=90.16 E-value=1.6 Score=43.14 Aligned_cols=55 Identities=9% Similarity=-0.009 Sum_probs=24.5
Q ss_pred EeCCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeCCcEEEEeCCCCeeE
Q 006939 9 GSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFSWEPIRCH 67 (625)
Q Consensus 9 GS~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~DsIrVWdl~sg~~i 67 (625)
|+.++.|..||.. ++.+..+......+.++.+.++|.+++.. +.|..|| .+++..
T Consensus 153 gt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l~v~t--~~l~~~d-~~g~~~ 207 (330)
T 3hxj_A 153 GSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGTIYFGS--DKVYAIN-PDGTEK 207 (330)
T ss_dssp ECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCCEEEES--SSEEEEC-TTSCEE
T ss_pred EcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCEEEEEe--CEEEEEC-CCCcEE
Confidence 3444555555555 44444433333334444444444443332 4455555 344433
No 247
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=89.59 E-value=2.2 Score=48.31 Aligned_cols=98 Identities=12% Similarity=0.058 Sum_probs=66.1
Q ss_pred EEEEEeCCCeEEEEECCCCeEEEEeCCCC-----------C-C------------------------eEEEEEcCCCCEE
Q 006939 5 FHFSGSADRTVKFWDLETFELIGSAGPET-----------S-G------------------------VRCLTFNPDGRTL 48 (625)
Q Consensus 5 lLASGS~D~tVkIWDL~tg~~i~tl~~h~-----------~-~------------------------V~sv~fsPdg~~L 48 (625)
.++.++.++.+.++|..+|+.+....... . + -..++|+|+..++
T Consensus 316 ~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~ 395 (668)
T 1kv9_A 316 VLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLV 395 (668)
T ss_dssp EEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEE
T ss_pred EEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEE
Confidence 68888999999999999999884332111 0 0 0125677776655
Q ss_pred EEE------------------------------------eCC-cEEEEeCCCCeeEEEEeccCCcee-EEEecCCCEEEE
Q 006939 49 LCG------------------------------------LHE-SLKVFSWEPIRCHDAVDVGWSRLS-DLNVHEGKLLGC 90 (625)
Q Consensus 49 vSg------------------------------------s~D-sIrVWdl~sg~~i~t~~~~~s~v~-~l~~~dg~lL~s 90 (625)
+.. ..+ .|..||..+|+....+..+..... .+. ..+.+++.
T Consensus 396 yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~~~~~-t~gg~vf~ 474 (668)
T 1kv9_A 396 YIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPTHWNGGTLS-TAGNLVFQ 474 (668)
T ss_dssp EEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESSSCCCCEEE-ETTTEEEE
T ss_pred EEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCCCCCcCceeE-eCCCEEEE
Confidence 431 122 699999999998877654432211 222 35677888
Q ss_pred eeCCCeEEEEecc
Q 006939 91 SYNQSCVGVWVVD 103 (625)
Q Consensus 91 g~~Dg~V~vWdv~ 103 (625)
+..|+.|+.||..
T Consensus 475 g~~dg~l~a~d~~ 487 (668)
T 1kv9_A 475 GTAAGQMHAYSAD 487 (668)
T ss_dssp ECTTSEEEEEETT
T ss_pred ECCcccchhhhhh
Confidence 8999999999987
No 248
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=89.17 E-value=9.4 Score=36.83 Aligned_cols=99 Identities=7% Similarity=-0.052 Sum_probs=58.7
Q ss_pred CCEEEEEeC--CCeEEEEECCCCeEEEEe-CCCCCCeEEEEEcCCCCEEEEEeCC--cEEEEeCCCCeeEEEEeccCCce
Q 006939 3 GYFHFSGSA--DRTVKFWDLETFELIGSA-GPETSGVRCLTFNPDGRTLLCGLHE--SLKVFSWEPIRCHDAVDVGWSRL 77 (625)
Q Consensus 3 G~lLASGS~--D~tVkIWDL~tg~~i~tl-~~h~~~V~sv~fsPdg~~LvSgs~D--sIrVWdl~sg~~i~t~~~~~s~v 77 (625)
|.++++... .+.|..+++.. .....+ .........++|++++..|+.+... .|.+++.........+.. ....
T Consensus 134 g~lyv~~~~~~~~~I~~~~~dg-~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~-~~~P 211 (267)
T 1npe_A 134 GNLYWTDWNRDNPKIETSHMDG-TNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEG-LQYP 211 (267)
T ss_dssp TEEEEEECCSSSCEEEEEETTS-CCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEEC-CCSE
T ss_pred CEEEEEECCCCCcEEEEEecCC-CCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecC-CCCc
Confidence 444444433 35777777753 322222 2223457889999987766655543 799999875443333332 2233
Q ss_pred eEEEecCCCEEEEeeCCCeEEEEecc
Q 006939 78 SDLNVHEGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 78 ~~l~~~dg~lL~sg~~Dg~V~vWdv~ 103 (625)
..+.+.++.++++....+.|..+|..
T Consensus 212 ~gi~~d~~~lyva~~~~~~v~~~d~~ 237 (267)
T 1npe_A 212 FAVTSYGKNLYYTDWKTNSVIAMDLA 237 (267)
T ss_dssp EEEEEETTEEEEEETTTTEEEEEETT
T ss_pred eEEEEeCCEEEEEECCCCeEEEEeCC
Confidence 45555556666666667788888775
No 249
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=88.97 E-value=3 Score=46.55 Aligned_cols=48 Identities=10% Similarity=-0.020 Sum_probs=33.6
Q ss_pred cEEEEeCCCCeeEEEEeccCCcee-EEEecCCCEEEEeeCCCeEEEEecc
Q 006939 55 SLKVFSWEPIRCHDAVDVGWSRLS-DLNVHEGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 55 sIrVWdl~sg~~i~t~~~~~s~v~-~l~~~dg~lL~sg~~Dg~V~vWdv~ 103 (625)
.|..||+.+++.......+..... .+. ..+.+++.+..|+.++.||.+
T Consensus 467 ~l~A~D~~tG~~~W~~~~~~~~~~g~~~-tagglvf~g~~dg~l~A~D~~ 515 (582)
T 1flg_A 467 SLRAMDPVSGKVVWEHKEHLPLWAGVLA-TAGNLVFTGTGDGYFKAFDAK 515 (582)
T ss_dssp EEEEECTTTCCEEEEEEESSCCCSCCEE-ETTTEEEEECTTSEEEEEETT
T ss_pred eEEEEECCCCCEEEEecCCCCCcccceE-eCCCEEEEECCCCcEEEEECC
Confidence 688999999998776654322111 122 245677778999999999987
No 250
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=88.88 E-value=2 Score=42.37 Aligned_cols=91 Identities=11% Similarity=-0.041 Sum_probs=64.2
Q ss_pred EEEEEeCCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCeeEEEEeccCCceeEEEe-
Q 006939 5 FHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVDVGWSRLSDLNV- 82 (625)
Q Consensus 5 lLASGS~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~i~t~~~~~s~v~~l~~- 82 (625)
.+..|+.++.|..||.. ++.+..+..+...+.++.+.+++.+++ |+.+ .|..||.. ++....+......+..+..
T Consensus 109 ~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~l~v-gt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d 185 (330)
T 3hxj_A 109 ILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGTIYV-GSNDNYLYAINPD-GTEKWRFKTNDAITSAASIG 185 (330)
T ss_dssp EEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSCEEE-ECTTSEEEEECTT-SCEEEEEECSSCCCSCCEEC
T ss_pred EEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCEEEE-EcCCCEEEEECCC-CCEeEEEecCCCceeeeEEc
Confidence 45667788899999998 877766665555667777777887655 5555 89999998 7776666554444555555
Q ss_pred cCCCEEEEeeCCCeEEEEe
Q 006939 83 HEGKLLGCSYNQSCVGVWV 101 (625)
Q Consensus 83 ~dg~lL~sg~~Dg~V~vWd 101 (625)
.++.+++.+ +.|..||
T Consensus 186 ~~g~l~v~t---~~l~~~d 201 (330)
T 3hxj_A 186 KDGTIYFGS---DKVYAIN 201 (330)
T ss_dssp TTCCEEEES---SSEEEEC
T ss_pred CCCEEEEEe---CEEEEEC
Confidence 466666554 6788887
No 251
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=88.01 E-value=1.4 Score=50.17 Aligned_cols=61 Identities=10% Similarity=0.006 Sum_probs=47.7
Q ss_pred CCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCeeEEEEecc
Q 006939 12 DRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVDVG 73 (625)
Q Consensus 12 D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~i~t~~~~ 73 (625)
+++|..||+.+|+.+..+..+.. +..-.+...+.+++.|+.| .|++||.++|+.+..+..+
T Consensus 454 ~g~l~A~D~~tG~~~W~~~~~~~-~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~ 515 (689)
T 1yiq_A 454 SGKLIAWDPVKQQAAWEVPYVTI-FNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAA 515 (689)
T ss_dssp EEEEEEEETTTTEEEEEEEESSS-CCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred ceeEEEEECCCCCeEeEccCCCC-ccCccceECCCEEEEECCCCcEEEEECCCCccceeeeCC
Confidence 47899999999999887765532 2223455677888889888 9999999999999887654
No 252
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=87.96 E-value=0.85 Score=52.43 Aligned_cols=100 Identities=8% Similarity=-0.024 Sum_probs=56.7
Q ss_pred CCCCEEEEEe-----CCCeEEEEECCCC-eEEE-EeCCCCCCeEEEEEcCCCCEEEEEeCC------cEEEEeCCCCeeE
Q 006939 1 MSGYFHFSGS-----ADRTVKFWDLETF-ELIG-SAGPETSGVRCLTFNPDGRTLLCGLHE------SLKVFSWEPIRCH 67 (625)
Q Consensus 1 PdG~lLASGS-----~D~tVkIWDL~tg-~~i~-tl~~h~~~V~sv~fsPdg~~LvSgs~D------sIrVWdl~sg~~i 67 (625)
|||++||=+. ...+|+++|+.++ +.+. .+. .....+.|+|||+.|+....+ .|.+|++.++...
T Consensus 184 PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~ 260 (751)
T 2xe4_A 184 PEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSE 260 (751)
T ss_dssp TTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGGG
T ss_pred CCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEEecCCCEEEEEEECCCCCCCEEEEEECCCCchh
Confidence 6899887433 2236999999998 6321 111 113467899999877654432 3777787765432
Q ss_pred --EEEec-cCCceeEEEe-cCCCEEEEee---CCCeEEEEecc
Q 006939 68 --DAVDV-GWSRLSDLNV-HEGKLLGCSY---NQSCVGVWVVD 103 (625)
Q Consensus 68 --~t~~~-~~s~v~~l~~-~dg~lL~sg~---~Dg~V~vWdv~ 103 (625)
.++.. .......+.+ ++|++|+... ....|.++|++
T Consensus 261 ~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~ 303 (751)
T 2xe4_A 261 DVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLR 303 (751)
T ss_dssp CEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESS
T ss_pred cEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECC
Confidence 22221 1122234444 7888775543 22355666654
No 253
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=87.35 E-value=6.7 Score=43.98 Aligned_cols=100 Identities=11% Similarity=0.037 Sum_probs=64.9
Q ss_pred CEEEEEeCCCeEEEEECCCCeEEEEeCCC------------CC-Ce--------------------------EEEEEcCC
Q 006939 4 YFHFSGSADRTVKFWDLETFELIGSAGPE------------TS-GV--------------------------RCLTFNPD 44 (625)
Q Consensus 4 ~lLASGS~D~tVkIWDL~tg~~i~tl~~h------------~~-~V--------------------------~sv~fsPd 44 (625)
..++.++.++.+..+|.++|+.+...... .+ .+ ..++|+|+
T Consensus 324 ~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~ 403 (599)
T 1w6s_A 324 KLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPK 403 (599)
T ss_dssp EEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETT
T ss_pred EEEEEECCCcEEEEEECCCCCEeecccccCCcccccccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCC
Confidence 56788899999999999999988654311 00 11 13456666
Q ss_pred CCEEEEEe---------------------------------------CC-cEEEEeCCCCeeEEEEeccCCceeEEEecC
Q 006939 45 GRTLLCGL---------------------------------------HE-SLKVFSWEPIRCHDAVDVGWSRLSDLNVHE 84 (625)
Q Consensus 45 g~~LvSgs---------------------------------------~D-sIrVWdl~sg~~i~t~~~~~s~v~~l~~~d 84 (625)
..+++... .. .|..||+.+++...................
T Consensus 404 ~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~ta 483 (599)
T 1w6s_A 404 RELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQIKAYNAITGDYKWEKMERFAVWGGTMATA 483 (599)
T ss_dssp TTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCEEEEEECTTTCCEEEEEEESSCCCSBCEEET
T ss_pred CCEEEEeccccceeeecccccccCCcceecccceeccCCcCCcccCCCcCeEEEEECCCCCEEeEecCCCCccCcceEec
Confidence 55554321 23 688899999988776654322111111124
Q ss_pred CCEEEEeeCCCeEEEEecc
Q 006939 85 GKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 85 g~lL~sg~~Dg~V~vWdv~ 103 (625)
+.+++.+..|+.++.||.+
T Consensus 484 gg~vf~gt~dg~l~A~D~~ 502 (599)
T 1w6s_A 484 GDLVFYGTLDGYLKARDSD 502 (599)
T ss_dssp TTEEEEECTTSEEEEEETT
T ss_pred CCEEEEECCCCeEEEEECC
Confidence 6677778899999999987
No 254
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=87.32 E-value=5.7 Score=39.71 Aligned_cols=101 Identities=14% Similarity=0.080 Sum_probs=63.8
Q ss_pred CCCCEE-EEEeCCCeEEEEECCCCe--EEEEeCCCCCCeEEEEEcCCCCEEEEEeC----------C-cEEEEeCCCCee
Q 006939 1 MSGYFH-FSGSADRTVKFWDLETFE--LIGSAGPETSGVRCLTFNPDGRTLLCGLH----------E-SLKVFSWEPIRC 66 (625)
Q Consensus 1 PdG~lL-ASGS~D~tVkIWDL~tg~--~i~tl~~h~~~V~sv~fsPdg~~LvSgs~----------D-sIrVWdl~sg~~ 66 (625)
|||.+| ++-...+.|..|++.... ....+....+ ...+++.++|+++++... . .|.++|.. ++.
T Consensus 194 ~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~-G~~ 271 (322)
T 2fp8_A 194 ADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEF-GNI 271 (322)
T ss_dssp TTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTT-SCE
T ss_pred CCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEecCcccccccCCCccEEEEECCC-CCE
Confidence 567744 444566789999887421 1111111122 778899999998776544 3 57778764 666
Q ss_pred EEEEecc----CCceeEEEecCCCEEEEeeCCCeEEEEecc
Q 006939 67 HDAVDVG----WSRLSDLNVHEGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 67 i~t~~~~----~s~v~~l~~~dg~lL~sg~~Dg~V~vWdv~ 103 (625)
+..+... ...+..+.+.++++++++...+.|..+++.
T Consensus 272 ~~~~~~~~g~~~~~~~~~~~~~g~L~v~~~~~~~i~~~~~~ 312 (322)
T 2fp8_A 272 LEVIPLPPPFAGEHFEQIQEHDGLLYIGTLFHGSVGILVYD 312 (322)
T ss_dssp EEEEECCTTTTTSCCCEEEEETTEEEEECSSCSEEEEEEC-
T ss_pred EEEEECCCCCccccceEEEEeCCEEEEeecCCCceEEEecc
Confidence 6555432 234555555677888887788889888876
No 255
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=87.13 E-value=3 Score=46.87 Aligned_cols=101 Identities=13% Similarity=0.055 Sum_probs=65.0
Q ss_pred CCCCEEEEEe------------------CCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeCCc-------
Q 006939 1 MSGYFHFSGS------------------ADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHES------- 55 (625)
Q Consensus 1 PdG~lLASGS------------------~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~Ds------- 55 (625)
|++.+++.++ .++++.++|..+.+.+.++..-. ...-++++|||+++++.+.++
T Consensus 145 p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~ 223 (595)
T 1fwx_A 145 PRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLP 223 (595)
T ss_dssp SBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHH
T ss_pred CCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchh
Confidence 5777777774 34578999999999887764211 235567899999999877542
Q ss_pred ---------EEEEe-----------------------CCC--Cee-EEEEeccCCceeEEEe-cCCCEE-EEeeCCCeEE
Q 006939 56 ---------LKVFS-----------------------WEP--IRC-HDAVDVGWSRLSDLNV-HEGKLL-GCSYNQSCVG 98 (625)
Q Consensus 56 ---------IrVWd-----------------------l~s--g~~-i~t~~~~~s~v~~l~~-~dg~lL-~sg~~Dg~V~ 98 (625)
|.|+| ..+ +.. +..+.++-.+ ..+.+ +||+++ +++..+..|.
T Consensus 224 ~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipvg~~P-hGv~~sPDGk~v~V~~~~s~~Vs 302 (595)
T 1fwx_A 224 EMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPIANNP-HGCNMAPDKKHLCVAGKLSPTVT 302 (595)
T ss_dssp HHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEEESSC-CCEEECTTSSEEEEECTTSSBEE
T ss_pred hccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEecCCCc-eEEEEcCCCCEEEEeCCCCCeEE
Confidence 44444 333 222 3333333222 23344 789876 5555678999
Q ss_pred EEecc
Q 006939 99 VWVVD 103 (625)
Q Consensus 99 vWdv~ 103 (625)
++|+.
T Consensus 303 Vid~~ 307 (595)
T 1fwx_A 303 VLDVT 307 (595)
T ss_dssp EEEGG
T ss_pred EEECc
Confidence 99998
No 256
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=86.81 E-value=11 Score=37.36 Aligned_cols=101 Identities=11% Similarity=0.049 Sum_probs=60.8
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeCC-c--EEEEeCCCCeeEEEEec-cCCc
Q 006939 1 MSGYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-S--LKVFSWEPIRCHDAVDV-GWSR 76 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~D-s--IrVWdl~sg~~i~t~~~-~~s~ 76 (625)
|+|.++++-..++.|..||... +....+.. ...+..++|.++|+++++.... . |..++..+++....... ....
T Consensus 41 ~~g~lyv~d~~~~~I~~~d~~g-~~~~~~~~-~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~~~~~ 118 (306)
T 2p4o_A 41 PDGTIFVTNHEVGEIVSITPDG-NQQIHATV-EGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLLTLPDAIF 118 (306)
T ss_dssp TTSCEEEEETTTTEEEEECTTC-CEEEEEEC-SSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEEECTTCSC
T ss_pred CCCCEEEEeCCCCeEEEECCCC-ceEEEEeC-CCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEEEeCCCccc
Confidence 5788888877888999998875 33333322 2468899999999977765432 4 66677777765433322 1111
Q ss_pred eeEEEe-cCCCEEEEeeCCCeEEEEecc
Q 006939 77 LSDLNV-HEGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 77 v~~l~~-~dg~lL~sg~~Dg~V~vWdv~ 103 (625)
...+.. .++.++++...++.|.++|..
T Consensus 119 ~~g~~~~~~~~~~v~d~~~g~i~~~d~~ 146 (306)
T 2p4o_A 119 LNGITPLSDTQYLTADSYRGAIWLIDVV 146 (306)
T ss_dssp EEEEEESSSSEEEEEETTTTEEEEEETT
T ss_pred cCcccccCCCcEEEEECCCCeEEEEeCC
Confidence 223332 344445555456777777654
No 257
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=81.33 E-value=15 Score=36.46 Aligned_cols=91 Identities=13% Similarity=0.094 Sum_probs=53.2
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCeEEEEeC--C-----------------CCCCeEEEEEcC-CCCEEEEEeCCcEEEEe
Q 006939 1 MSGYFHFSGSADRTVKFWDLETFELIGSAG--P-----------------ETSGVRCLTFNP-DGRTLLCGLHESLKVFS 60 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~tg~~i~tl~--~-----------------h~~~V~sv~fsP-dg~~LvSgs~DsIrVWd 60 (625)
++|.++.++..++.|..||..++....... . ....+..+++.+ +|+++++.....|.++|
T Consensus 28 ~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~~~~i~~~d 107 (322)
T 2fp8_A 28 STNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDCYYHLSVVG 107 (322)
T ss_dssp TTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEETTTEEEEEC
T ss_pred CCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEECCCCEEEEe
Confidence 467777788888999999988665432110 0 013578899998 66655543333688888
Q ss_pred CCCCeeEEEEe----ccCCceeEEEe-c-CCCEEEEe
Q 006939 61 WEPIRCHDAVD----VGWSRLSDLNV-H-EGKLLGCS 91 (625)
Q Consensus 61 l~sg~~i~t~~----~~~s~v~~l~~-~-dg~lL~sg 91 (625)
..++....... .......++.+ + +|.++++.
T Consensus 108 ~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d 144 (322)
T 2fp8_A 108 SEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTD 144 (322)
T ss_dssp TTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEE
T ss_pred CCCCEEEEecccCCCCcccccceEEEecCCCEEEEEC
Confidence 77554321111 11233456666 5 56655543
No 258
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=74.18 E-value=38 Score=35.11 Aligned_cols=99 Identities=10% Similarity=0.046 Sum_probs=56.6
Q ss_pred CCEEEEEeCC-CeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeCC--cEEEEeCCCCeeEEEEeccCCceeE
Q 006939 3 GYFHFSGSAD-RTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE--SLKVFSWEPIRCHDAVDVGWSRLSD 79 (625)
Q Consensus 3 G~lLASGS~D-~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~D--sIrVWdl~sg~~i~t~~~~~s~v~~ 79 (625)
|.++.+-... +.|..+++..................|+|+|++..|+-+... .|..+++........+..+......
T Consensus 214 g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~g 293 (386)
T 3v65_B 214 GTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFA 293 (386)
T ss_dssp TEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEE
T ss_pred CeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceE
Confidence 3444444444 566666665332222222223446789999876666554443 7999998754333333333344455
Q ss_pred EEecCCCEEEEeeCCCeEEEEe
Q 006939 80 LNVHEGKLLGCSYNQSCVGVWV 101 (625)
Q Consensus 80 l~~~dg~lL~sg~~Dg~V~vWd 101 (625)
+.+.++.++.+-...+.|..++
T Consensus 294 iav~~~~ly~td~~~~~V~~~~ 315 (386)
T 3v65_B 294 ITVFEDSLYWTDWHTKSINSAN 315 (386)
T ss_dssp EEEETTEEEEEETTTTEEEEEE
T ss_pred EEEECCEEEEeeCCCCeEEEEE
Confidence 6665666667766677777766
No 259
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=73.28 E-value=48 Score=37.58 Aligned_cols=99 Identities=12% Similarity=0.058 Sum_probs=64.3
Q ss_pred CCCEEEEEeCCCeEEEEECCCCeEEEEeC----CCCCCeEEEEEcCCCCEEEEEeCCcEEEEeCCCCeeEEEEe------
Q 006939 2 SGYFHFSGSADRTVKFWDLETFELIGSAG----PETSGVRCLTFNPDGRTLLCGLHESLKVFSWEPIRCHDAVD------ 71 (625)
Q Consensus 2 dG~lLASGS~D~tVkIWDL~tg~~i~tl~----~h~~~V~sv~fsPdg~~LvSgs~DsIrVWdl~sg~~i~t~~------ 71 (625)
+|.+|-.|+.++-|.+||..+++...... .....|.++...++|.+++... +.|.+|+..+++......
T Consensus 416 ~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~~~~~~~~~~~~~~~~~ 494 (795)
T 4a2l_A 416 KKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTL-SALVRFNPEQRSFTTIEKEKDGTP 494 (795)
T ss_dssp TTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEES-SCEEEEETTTTEEEECCBCTTCCB
T ss_pred CCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEec-CceeEEeCCCCeEEEccccccccc
Confidence 45535556776778999998877544322 2345799999988898776554 678889988776543321
Q ss_pred ccCCceeEEEe-cCCCEEEEeeCCCeEEEEecc
Q 006939 72 VGWSRLSDLNV-HEGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 72 ~~~s~v~~l~~-~dg~lL~sg~~Dg~V~vWdv~ 103 (625)
.....+.++.. .+|.+.+... +-|..||..
T Consensus 495 ~~~~~i~~i~~d~~g~lWigt~--~Gl~~~~~~ 525 (795)
T 4a2l_A 495 VVSKQITTLFRDSHKRLWIGGE--EGLSVFKQE 525 (795)
T ss_dssp CCCCCEEEEEECTTCCEEEEES--SCEEEEEEE
T ss_pred cCCceEEEEEECCCCCEEEEeC--CceEEEeCC
Confidence 12244666665 5677666554 357778765
No 260
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=72.47 E-value=9.4 Score=42.29 Aligned_cols=62 Identities=11% Similarity=-0.039 Sum_probs=43.8
Q ss_pred CCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCeeEEEEecc
Q 006939 11 ADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVDVG 73 (625)
Q Consensus 11 ~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~i~t~~~~ 73 (625)
.++.|..||+.+++.+..+... ..+....+...+..++.++.| .|.+||..+|+.+..+..+
T Consensus 442 ~~g~l~a~D~~tG~~~W~~~~~-~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~ 504 (571)
T 2ad6_A 442 EMGQIRAFDLTTGKAKWTKWEK-FAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMP 504 (571)
T ss_dssp CCEEEEEECTTTCCEEEEEEES-SCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred CCCeEEEEECCCCCEEEEecCC-CCccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeCC
Confidence 3578999999999987776432 222222223345667777777 9999999999999877654
No 261
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=72.06 E-value=53 Score=33.43 Aligned_cols=98 Identities=9% Similarity=0.053 Sum_probs=55.4
Q ss_pred CCEEEEEeCC-CeEEEEECCCCeEEEEe-CCCCCCeEEEEEcCCCCEEEEEeCC--cEEEEeCCCCeeEEEEeccCCcee
Q 006939 3 GYFHFSGSAD-RTVKFWDLETFELIGSA-GPETSGVRCLTFNPDGRTLLCGLHE--SLKVFSWEPIRCHDAVDVGWSRLS 78 (625)
Q Consensus 3 G~lLASGS~D-~tVkIWDL~tg~~i~tl-~~h~~~V~sv~fsPdg~~LvSgs~D--sIrVWdl~sg~~i~t~~~~~s~v~ 78 (625)
|.++.+-... +.|..+++.. .....+ .........|+|+|++..|+-+... .|..+++........+........
T Consensus 171 g~ly~td~~~~~~I~r~~~dG-~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~ 249 (349)
T 3v64_C 171 GTIYWTDWGNTPRIEASSMDG-SGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPF 249 (349)
T ss_dssp TEEEEEECSSSCEEEEEETTS-CSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEE
T ss_pred CeEEEeccCCCCEEEEEeCCC-CCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCce
Confidence 4445554444 6666666653 222222 2223456889999877666654443 799999875433333333333445
Q ss_pred EEEecCCCEEEEeeCCCeEEEEe
Q 006939 79 DLNVHEGKLLGCSYNQSCVGVWV 101 (625)
Q Consensus 79 ~l~~~dg~lL~sg~~Dg~V~vWd 101 (625)
.+.+.++.++.+-...+.|..++
T Consensus 250 giav~~~~ly~td~~~~~V~~~~ 272 (349)
T 3v64_C 250 AITVFEDSLYWTDWHTKSINSAN 272 (349)
T ss_dssp EEEEETTEEEEEETTTTEEEEEE
T ss_pred EEEEECCEEEEecCCCCeEEEEE
Confidence 55555666666666666666665
No 262
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=70.79 E-value=35 Score=36.08 Aligned_cols=97 Identities=11% Similarity=0.102 Sum_probs=56.6
Q ss_pred CCEEEEEeCCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeC-----C-cEEEEeCCCCeeE--EEEeccC
Q 006939 3 GYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLH-----E-SLKVFSWEPIRCH--DAVDVGW 74 (625)
Q Consensus 3 G~lLASGS~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~-----D-sIrVWdl~sg~~i--~t~~~~~ 74 (625)
+.++++ ...+.|..+|+..+....... .......++|+++|.+|+.+.. . .+.+++.. +... ..+. ..
T Consensus 150 g~Lyv~-d~~~~I~~id~~~~~v~~~~~-~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~-g~~~~~~~l~-~~ 225 (430)
T 3tc9_A 150 NHLYLV-GEQHPTRLIDFEKEYVSTVYS-GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRE-SGFKVITELT-KG 225 (430)
T ss_dssp EEEEEE-EBTEEEEEEETTTTEEEEEEC-CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGG-GTSCSEEEEE-EC
T ss_pred CeEEEE-eCCCcEEEEECCCCEEEEEec-CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCC-Cceeeeeeec-cC
Confidence 334444 333778889998766544333 4566889999999995555443 1 23333322 2221 1221 12
Q ss_pred CceeEEEe-c-CCCEEEEeeCCCeEEEEecc
Q 006939 75 SRLSDLNV-H-EGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 75 s~v~~l~~-~-dg~lL~sg~~Dg~V~vWdv~ 103 (625)
.....+.+ + ++.++++-..++.|..|+.+
T Consensus 226 ~~p~giavdp~~g~lyv~d~~~~~V~~~~~~ 256 (430)
T 3tc9_A 226 QNCNGAETHPINGELYFNSWNAGQVFRYDFT 256 (430)
T ss_dssp SSCCCEEECTTTCCEEEEETTTTEEEEEETT
T ss_pred CCceEEEEeCCCCEEEEEECCCCEEEEEECC
Confidence 33445555 4 67777777777888888876
No 263
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=70.30 E-value=48 Score=34.38 Aligned_cols=101 Identities=10% Similarity=0.021 Sum_probs=67.0
Q ss_pred CCEEEEEeCCCeEEEEECCCCeEEEE-eCCC----C--CCeEEEEE---cCCCCEEEEEeC-------------C-cEEE
Q 006939 3 GYFHFSGSADRTVKFWDLETFELIGS-AGPE----T--SGVRCLTF---NPDGRTLLCGLH-------------E-SLKV 58 (625)
Q Consensus 3 G~lLASGS~D~tVkIWDL~tg~~i~t-l~~h----~--~~V~sv~f---sPdg~~LvSgs~-------------D-sIrV 58 (625)
|.++++.-..++|..||...+..... +.+- . ..+..|.| .|+++++++... + .|..
T Consensus 25 g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~ 104 (334)
T 2p9w_A 25 QVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHS 104 (334)
T ss_dssp TEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEE
T ss_pred CEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEEE
Confidence 55556655899999999986654333 3221 1 13578899 688888775431 3 6999
Q ss_pred EeCC---CCeeEEEEec-------------cCCceeEEEe-cCCCEEEEeeCC-CeEEEEecc
Q 006939 59 FSWE---PIRCHDAVDV-------------GWSRLSDLNV-HEGKLLGCSYNQ-SCVGVWVVD 103 (625)
Q Consensus 59 Wdl~---sg~~i~t~~~-------------~~s~v~~l~~-~dg~lL~sg~~D-g~V~vWdv~ 103 (625)
||+. +++....... ....+.++.+ .+|+..+++... +.|..++.+
T Consensus 105 ~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pd 167 (334)
T 2p9w_A 105 FNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSAD 167 (334)
T ss_dssp EESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTT
T ss_pred EcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCC
Confidence 9999 7776655432 2234778888 688888877776 766665555
No 264
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=70.21 E-value=23 Score=39.93 Aligned_cols=99 Identities=15% Similarity=0.101 Sum_probs=61.6
Q ss_pred CCEEEEEeCCCeEEEEECCCCeEEEEeCCCCCC----------e-EEEEEcCCCCEEEEEeCC-cEEEEeCCCCeeEEEE
Q 006939 3 GYFHFSGSADRTVKFWDLETFELIGSAGPETSG----------V-RCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAV 70 (625)
Q Consensus 3 G~lLASGS~D~tVkIWDL~tg~~i~tl~~h~~~----------V-~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~i~t~ 70 (625)
+..++.++.++.|.-+|..+|+.+..+...... + ..+.+ ++..++.++.| .|..+|..+|+....+
T Consensus 66 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W~~ 143 (668)
T 1kv9_A 66 DGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVAL--WGDKVYVGTLDGRLIALDAKTGKAIWSQ 143 (668)
T ss_dssp TTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--EBTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEE--ECCEEEEEcCCCEEEEEECCCCCEeeee
Confidence 345566777889999999999998887644221 0 11222 24456666666 8999999999988776
Q ss_pred ecc-----CCceeEEEecCCCEEEEeeC-----CCeEEEEecc
Q 006939 71 DVG-----WSRLSDLNVHEGKLLGCSYN-----QSCVGVWVVD 103 (625)
Q Consensus 71 ~~~-----~s~v~~l~~~dg~lL~sg~~-----Dg~V~vWdv~ 103 (625)
... +.....-.+.++.+++.... ++.|..||..
T Consensus 144 ~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~ 186 (668)
T 1kv9_A 144 QTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDAD 186 (668)
T ss_dssp ECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETT
T ss_pred ccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECC
Confidence 542 11111111235544443322 5789999886
No 265
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=69.79 E-value=92 Score=30.96 Aligned_cols=101 Identities=12% Similarity=0.025 Sum_probs=57.8
Q ss_pred CCEEEEEeCCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeC---CcEEEEeCCCCeeEEEEeccCCceeE
Q 006939 3 GYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLH---ESLKVFSWEPIRCHDAVDVGWSRLSD 79 (625)
Q Consensus 3 G~lLASGS~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~---DsIrVWdl~sg~~i~t~~~~~s~v~~ 79 (625)
+.++.+-...+.|.++|+........+.........+++.|.+..++-+.. ..|..++...................
T Consensus 89 ~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~~~~~~~~P~g 168 (316)
T 1ijq_A 89 SNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNG 168 (316)
T ss_dssp TEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEE
T ss_pred CeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEEEECCCCCceE
Confidence 445555566778888887644332223333456789999996665543333 26777777533222222223344556
Q ss_pred EEe-cC-CCEEEEeeCCCeEEEEecc
Q 006939 80 LNV-HE-GKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 80 l~~-~d-g~lL~sg~~Dg~V~vWdv~ 103 (625)
+.+ ++ +++.++-...+.|..+|++
T Consensus 169 la~d~~~~~lY~~D~~~~~I~~~d~d 194 (316)
T 1ijq_A 169 ITLDLLSGRLYWVDSKLHSISSIDVN 194 (316)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETT
T ss_pred EEEeccCCEEEEEECCCCeEEEEecC
Confidence 666 34 4455555566788888876
No 266
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=68.32 E-value=97 Score=31.43 Aligned_cols=101 Identities=8% Similarity=0.010 Sum_probs=56.6
Q ss_pred CCEEEEEeCCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEE-EEEeCC-cEEEEeCCCCeeEEEEeccCCceeEE
Q 006939 3 GYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTL-LCGLHE-SLKVFSWEPIRCHDAVDVGWSRLSDL 80 (625)
Q Consensus 3 G~lLASGS~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~L-vSgs~D-sIrVWdl~sg~~i~t~~~~~s~v~~l 80 (625)
+.++.+-...+.|..|++..+.....+.........+++.+.+..| ++-... .|.++++........+.........+
T Consensus 85 ~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~i 164 (349)
T 3v64_C 85 ELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAI 164 (349)
T ss_dssp TEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEE
T ss_pred cEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceE
Confidence 3444444455666666666544322222222345678888755544 444444 89999987554333333344556677
Q ss_pred Ee-c-CCCEEEEeeCC-CeEEEEecc
Q 006939 81 NV-H-EGKLLGCSYNQ-SCVGVWVVD 103 (625)
Q Consensus 81 ~~-~-dg~lL~sg~~D-g~V~vWdv~ 103 (625)
++ + ++.++.+-... +.|..++++
T Consensus 165 avdp~~g~ly~td~~~~~~I~r~~~d 190 (349)
T 3v64_C 165 ALHPMEGTIYWTDWGNTPRIEASSMD 190 (349)
T ss_dssp EEETTTTEEEEEECSSSCEEEEEETT
T ss_pred EEecCcCeEEEeccCCCCEEEEEeCC
Confidence 77 3 44455555544 677777766
No 267
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=67.26 E-value=69 Score=33.05 Aligned_cols=101 Identities=7% Similarity=-0.007 Sum_probs=57.0
Q ss_pred CCEEEEEeCCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEE-EEeCC-cEEEEeCCCCeeEEEEeccCCceeEE
Q 006939 3 GYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLL-CGLHE-SLKVFSWEPIRCHDAVDVGWSRLSDL 80 (625)
Q Consensus 3 G~lLASGS~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~Lv-Sgs~D-sIrVWdl~sg~~i~t~~~~~s~v~~l 80 (625)
+.++.+-...+.|..|++........+.........+++.+.+..|+ +-... .|.++++........+.........+
T Consensus 128 ~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~gi 207 (386)
T 3v65_B 128 ELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAI 207 (386)
T ss_dssp TEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEE
T ss_pred CeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEE
Confidence 44555555666777777765543333332233456788887655444 44434 78888887544333333444556677
Q ss_pred Ee-cC-CCEEEEeeCC-CeEEEEecc
Q 006939 81 NV-HE-GKLLGCSYNQ-SCVGVWVVD 103 (625)
Q Consensus 81 ~~-~d-g~lL~sg~~D-g~V~vWdv~ 103 (625)
.+ +. +.++.+-... +.|..++++
T Consensus 208 avdp~~g~ly~td~~~~~~I~r~~~d 233 (386)
T 3v65_B 208 ALHPMEGTIYWTDWGNTPRIEASSMD 233 (386)
T ss_dssp EEETTTTEEEEEECSSSCEEEEEETT
T ss_pred EEEcCCCeEEEeccCCCCEEEEEeCC
Confidence 77 33 4444554444 567766665
No 268
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=66.17 E-value=1.1e+02 Score=30.52 Aligned_cols=101 Identities=7% Similarity=-0.040 Sum_probs=55.7
Q ss_pred CCEEEEEeCCCeEEEEECCC----CeEEEEeCCCCCCeEEEEEcCCCCEE-EEEeCC-cEEEEeCCCCeeEEEEeccCCc
Q 006939 3 GYFHFSGSADRTVKFWDLET----FELIGSAGPETSGVRCLTFNPDGRTL-LCGLHE-SLKVFSWEPIRCHDAVDVGWSR 76 (625)
Q Consensus 3 G~lLASGS~D~tVkIWDL~t----g~~i~tl~~h~~~V~sv~fsPdg~~L-vSgs~D-sIrVWdl~sg~~i~t~~~~~s~ 76 (625)
+.++.+-...+.|..+++.. ......+.........+++.+.+..| ++-... .|.++++........+......
T Consensus 42 ~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~ 121 (316)
T 1ijq_A 42 NRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSK 121 (316)
T ss_dssp TEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCC
T ss_pred CEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCC
Confidence 45566666677888888775 12122222222456788888755544 443444 8999998755443333334455
Q ss_pred eeEEEe-cCCC-EEEEeeCC-CeEEEEecc
Q 006939 77 LSDLNV-HEGK-LLGCSYNQ-SCVGVWVVD 103 (625)
Q Consensus 77 v~~l~~-~dg~-lL~sg~~D-g~V~vWdv~ 103 (625)
...+.+ +.+. ++.+.... +.|..++++
T Consensus 122 P~~iavdp~~g~ly~~d~~~~~~I~~~~~d 151 (316)
T 1ijq_A 122 PRAIVVDPVHGFMYWTDWGTPAKIKKGGLN 151 (316)
T ss_dssp EEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred cceEEeCCCCCEEEEEccCCCCeEEEEcCC
Confidence 667777 3444 44444333 567776665
No 269
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=66.05 E-value=31 Score=38.56 Aligned_cols=100 Identities=12% Similarity=0.033 Sum_probs=61.4
Q ss_pred CEEEEEeC-CCeEEEEEC-CCCeEEEEeCCCCCC-----------eEEEEEcCCCCE----EEEEeCC-cEEEEeCCCCe
Q 006939 4 YFHFSGSA-DRTVKFWDL-ETFELIGSAGPETSG-----------VRCLTFNPDGRT----LLCGLHE-SLKVFSWEPIR 65 (625)
Q Consensus 4 ~lLASGS~-D~tVkIWDL-~tg~~i~tl~~h~~~-----------V~sv~fsPdg~~----LvSgs~D-sIrVWdl~sg~ 65 (625)
..+..++. ++.|.-+|. .+|+.+-.+...... .+.+.+.|.+.. ++.++.| .|..+|..+|+
T Consensus 63 g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG~ 142 (599)
T 1w6s_A 63 GKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETGE 142 (599)
T ss_dssp TEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTCC
T ss_pred CEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCCC
Confidence 34555566 888999999 999998777543221 123455443333 6666666 89999999999
Q ss_pred eEEEEeccC-----CceeEEEecCCCEEEEee-----CCCeEEEEecc
Q 006939 66 CHDAVDVGW-----SRLSDLNVHEGKLLGCSY-----NQSCVGVWVVD 103 (625)
Q Consensus 66 ~i~t~~~~~-----s~v~~l~~~dg~lL~sg~-----~Dg~V~vWdv~ 103 (625)
.+....... .....-.+.++.+++.++ .++.|+.||..
T Consensus 143 ~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~ 190 (599)
T 1w6s_A 143 TVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVK 190 (599)
T ss_dssp EEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETT
T ss_pred EEEeecCCCCCccceeecCCEEECCEEEEEecccccCCCCeEEEEECC
Confidence 887654432 111111223555444332 37889999887
No 270
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=65.84 E-value=72 Score=34.43 Aligned_cols=93 Identities=10% Similarity=-0.014 Sum_probs=59.3
Q ss_pred CCeEEEEECCCCeEEEEeCC----CCCCeEEEEEcCCCCEEEEEeCCcEEEEeCCCCe------------eEEEEecc--
Q 006939 12 DRTVKFWDLETFELIGSAGP----ETSGVRCLTFNPDGRTLLCGLHESLKVFSWEPIR------------CHDAVDVG-- 73 (625)
Q Consensus 12 D~tVkIWDL~tg~~i~tl~~----h~~~V~sv~fsPdg~~LvSgs~DsIrVWdl~sg~------------~i~t~~~~-- 73 (625)
++.||.-++..+..-+.+.. -...++.+..+|+|.+|+..+...|.|..+..+. ....+..+
T Consensus 40 ~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~ 119 (452)
T 3pbp_A 40 DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFNDNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEE 119 (452)
T ss_dssp TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECSSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGC
T ss_pred CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecCCeEEEEEecCccccCcccccccccceeEEEcCCc
Confidence 34556556653322222221 1235788999999999988777778887765221 11233332
Q ss_pred ----CCceeEEEec----CCCEEEEeeCCCeEEEEeccC
Q 006939 74 ----WSRLSDLNVH----EGKLLGCSYNQSCVGVWVVDI 104 (625)
Q Consensus 74 ----~s~v~~l~~~----dg~lL~sg~~Dg~V~vWdv~~ 104 (625)
...|..+.|| .+..|++=..|+.|++||+..
T Consensus 120 ~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~ 158 (452)
T 3pbp_A 120 EVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILN 158 (452)
T ss_dssp C--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTC
T ss_pred ccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEccc
Confidence 3457777773 567888888999999999984
No 271
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=65.68 E-value=41 Score=38.27 Aligned_cols=103 Identities=12% Similarity=0.035 Sum_probs=57.6
Q ss_pred CCCCEEEEEeC---CCeEEEEECCCC--eE--EEEeCCCCCCeEEEEEcCCCCEEEEEeC----C-cEEEEeCCCC-eeE
Q 006939 1 MSGYFHFSGSA---DRTVKFWDLETF--EL--IGSAGPETSGVRCLTFNPDGRTLLCGLH----E-SLKVFSWEPI-RCH 67 (625)
Q Consensus 1 PdG~lLASGS~---D~tVkIWDL~tg--~~--i~tl~~h~~~V~sv~fsPdg~~LvSgs~----D-sIrVWdl~sg-~~i 67 (625)
|||++|+-.+. ...|.++|+.++ +. ............++.|+..+.+++.... . .|.++++.++ ...
T Consensus 280 pDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~ 359 (751)
T 2xe4_A 280 ADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQPSDWS 359 (751)
T ss_dssp TTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTSTTCCC
T ss_pred CCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCCcccce
Confidence 68887765542 335778898875 33 2223344455666766654445555433 2 5777777642 222
Q ss_pred E-EEeccCC-ceeEEEecCCCEEEEeeCCCeEEEEecc
Q 006939 68 D-AVDVGWS-RLSDLNVHEGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 68 ~-t~~~~~s-~v~~l~~~dg~lL~sg~~Dg~V~vWdv~ 103 (625)
. .+...+. .+..+.+..+.++++...++..++|-++
T Consensus 360 ~~li~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~d 397 (751)
T 2xe4_A 360 HVLVDHSEDVFMESIAVRSNYLVVAGRRAGLTRIWTMM 397 (751)
T ss_dssp CEEECCCSSEEEEEEEECSSEEEEEEEETTEEEEEEEE
T ss_pred eeEECCCCCcEEEEEEEECCEEEEEEEeCCEEEEEEEe
Confidence 2 2333333 2344444456666777788877777555
No 272
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=65.16 E-value=96 Score=32.21 Aligned_cols=101 Identities=12% Similarity=0.024 Sum_probs=58.3
Q ss_pred CCEEEEEeCCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeC--C-cEEEEeCCCCeeEEEEeccCCceeE
Q 006939 3 GYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLH--E-SLKVFSWEPIRCHDAVDVGWSRLSD 79 (625)
Q Consensus 3 G~lLASGS~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~--D-sIrVWdl~sg~~i~t~~~~~s~v~~ 79 (625)
+.++.+-...+.|.+.++........+.......+.|++.|.+.+|+-... . .|...++........+.........
T Consensus 171 ~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~g 250 (400)
T 3p5b_L 171 SNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNG 250 (400)
T ss_dssp TEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEE
T ss_pred CceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEE
Confidence 445555555667777777644433333333455789999996555553332 2 6888887754433333333344566
Q ss_pred EEe-cC-CCEEEEeeCCCeEEEEecc
Q 006939 80 LNV-HE-GKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 80 l~~-~d-g~lL~sg~~Dg~V~vWdv~ 103 (625)
|.+ ++ +++.++-...+.|..+|++
T Consensus 251 lavd~~~~~lY~aD~~~~~I~~~d~d 276 (400)
T 3p5b_L 251 ITLDLLSGRLYWVDSKLHSISSIDVN 276 (400)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETT
T ss_pred EEEEeCCCEEEEEECCCCEEEEEeCC
Confidence 766 34 4444554555677777766
No 273
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=64.76 E-value=38 Score=35.87 Aligned_cols=61 Identities=10% Similarity=0.117 Sum_probs=40.0
Q ss_pred CCCEEEEEeCCCeEEEEECCCCeEEEEe-C-CCCCCeEEEEEcCCCCEEEEEeC-C-cEEEEeCC
Q 006939 2 SGYFHFSGSADRTVKFWDLETFELIGSA-G-PETSGVRCLTFNPDGRTLLCGLH-E-SLKVFSWE 62 (625)
Q Consensus 2 dG~lLASGS~D~tVkIWDL~tg~~i~tl-~-~h~~~V~sv~fsPdg~~LvSgs~-D-sIrVWdl~ 62 (625)
+|.++++-..++.|..+|..++.....+ . +....-..++|+|+|.+|+.+.. . .|+.+++.
T Consensus 239 ~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d 303 (433)
T 4hw6_A 239 NGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYN 303 (433)
T ss_dssp TCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBC
T ss_pred CCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCC
Confidence 5677767667778989998877653322 1 11122346999999996555444 3 78887765
No 274
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=64.37 E-value=39 Score=32.93 Aligned_cols=100 Identities=16% Similarity=0.175 Sum_probs=53.8
Q ss_pred CCCEEEEEeCC-----CeEEEEECCCCeEEEE--eCCCCCCeEEEEEcCCCCEEEEEeCC------cEEEEeCCCCeeEE
Q 006939 2 SGYFHFSGSAD-----RTVKFWDLETFELIGS--AGPETSGVRCLTFNPDGRTLLCGLHE------SLKVFSWEPIRCHD 68 (625)
Q Consensus 2 dG~lLASGS~D-----~tVkIWDL~tg~~i~t--l~~h~~~V~sv~fsPdg~~LvSgs~D------sIrVWdl~sg~~i~ 68 (625)
++++++.|+.+ ..+..||+.+.+-... +........++.+ ++.+++.|+.+ .+.+||..+.+...
T Consensus 159 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~ 236 (301)
T 2vpj_A 159 SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL--NDHIYVVGGFDGTAHLSSVEAYNIRTDSWTT 236 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEE
T ss_pred CCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEE--CCEEEEEeCCCCCcccceEEEEeCCCCcEEE
Confidence 45667777654 3578899887654322 2111112223333 56676776642 58899998776543
Q ss_pred EEeccCCce-eEEEecCCCEEEEeeCC-----CeEEEEecc
Q 006939 69 AVDVGWSRL-SDLNVHEGKLLGCSYNQ-----SCVGVWVVD 103 (625)
Q Consensus 69 t~~~~~s~v-~~l~~~dg~lL~sg~~D-----g~V~vWdv~ 103 (625)
.-....... ..+...++++++.|+.+ ..|.+||..
T Consensus 237 ~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~ 277 (301)
T 2vpj_A 237 VTSMTTPRCYVGATVLRGRLYAIAGYDGNSLLSSIECYDPI 277 (301)
T ss_dssp ECCCSSCCBSCEEEEETTEEEEECCBCSSSBEEEEEEEETT
T ss_pred CCCCCCcccceeEEEECCEEEEEcCcCCCcccccEEEEcCC
Confidence 322111111 12222477777777755 345666665
No 275
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=64.08 E-value=56 Score=33.89 Aligned_cols=91 Identities=12% Similarity=0.075 Sum_probs=57.9
Q ss_pred CCeEEEEECC---CCeEEEEeC--C-----------CCCCeEEEEEcCCCCEEEEEeCC--cEEEEeCCCCeeEEEEe--
Q 006939 12 DRTVKFWDLE---TFELIGSAG--P-----------ETSGVRCLTFNPDGRTLLCGLHE--SLKVFSWEPIRCHDAVD-- 71 (625)
Q Consensus 12 D~tVkIWDL~---tg~~i~tl~--~-----------h~~~V~sv~fsPdg~~LvSgs~D--sIrVWdl~sg~~i~t~~-- 71 (625)
+..|..||+. +++.+.... . ....+..+...++|+..++++.. .|..++... +....+.
T Consensus 99 ~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG-~~~~~~~~~ 177 (334)
T 2p9w_A 99 ASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADG-KTVSTFAWE 177 (334)
T ss_dssp CCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTS-CCEEEEEEC
T ss_pred CCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCC-CEEeeeeec
Confidence 6778899999 777654432 1 12357899999999999876654 344444432 2222221
Q ss_pred ccC----CceeEEEe-cCCCEEEEeeCCCeEEEEecc
Q 006939 72 VGW----SRLSDLNV-HEGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 72 ~~~----s~v~~l~~-~dg~lL~sg~~Dg~V~vWdv~ 103 (625)
..+ .....|.+ +++++|+.....+.+..+|+.
T Consensus 178 ~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~ 214 (334)
T 2p9w_A 178 SGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVS 214 (334)
T ss_dssp CCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECS
T ss_pred CCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCC
Confidence 111 11345666 688888777668889888876
No 276
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=63.37 E-value=14 Score=41.30 Aligned_cols=68 Identities=15% Similarity=0.173 Sum_probs=45.8
Q ss_pred CCCCEEEEEe-CCCeEEEEECCCCeEEEEeCCCCCC-eEEEEEcCCCCEEEEEeC-------CcEEEEeCCCCeeEE
Q 006939 1 MSGYFHFSGS-ADRTVKFWDLETFELIGSAGPETSG-VRCLTFNPDGRTLLCGLH-------ESLKVFSWEPIRCHD 68 (625)
Q Consensus 1 PdG~lLASGS-~D~tVkIWDL~tg~~i~tl~~h~~~-V~sv~fsPdg~~LvSgs~-------DsIrVWdl~sg~~i~ 68 (625)
++|++++.|+ .+..+.+||..+.+....-..+... -.++.+.++|++++.|+. +.+.+||..+.....
T Consensus 252 ~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~ 328 (656)
T 1k3i_A 252 GNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTS 328 (656)
T ss_dssp TTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEE
T ss_pred CCCCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCccee
Confidence 3788999998 4568999999877654332222121 234556679999888873 258899998776543
No 277
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=63.36 E-value=93 Score=35.19 Aligned_cols=99 Identities=9% Similarity=0.121 Sum_probs=61.9
Q ss_pred CCCEEEEEeCCCeEEEEECCCCeEEEEeCC--------CCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCeeEEEEe-
Q 006939 2 SGYFHFSGSADRTVKFWDLETFELIGSAGP--------ETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVD- 71 (625)
Q Consensus 2 dG~lLASGS~D~tVkIWDL~tg~~i~tl~~--------h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~i~t~~- 71 (625)
+|.+. .|+.++-|..||..++........ ....|.++...++|.+|..|..+ .|.+||..+++......
T Consensus 367 ~g~lW-iGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~ 445 (795)
T 4a2l_A 367 DKNLW-IGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQR 445 (795)
T ss_dssp TSCEE-EEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTT
T ss_pred CCCEE-EEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecC
Confidence 34444 356666688899887765433211 23568999998899834455665 89999988876543221
Q ss_pred ---ccCCceeEEEe-cCCCEEEEeeCCCeEEEEecc
Q 006939 72 ---VGWSRLSDLNV-HEGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 72 ---~~~s~v~~l~~-~dg~lL~sg~~Dg~V~vWdv~ 103 (625)
.....+..+.. .+|.+++... + -+..|+..
T Consensus 446 ~~~l~~~~v~~i~~d~~g~lwigt~-~-Gl~~~~~~ 479 (795)
T 4a2l_A 446 NSQLVNENVYAILPDGEGNLWLGTL-S-ALVRFNPE 479 (795)
T ss_dssp TSCCSCSCEEEEEECSSSCEEEEES-S-CEEEEETT
T ss_pred CCCcCCCeeEEEEECCCCCEEEEec-C-ceeEEeCC
Confidence 12345666665 4666665554 3 47788765
No 278
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=60.17 E-value=56 Score=34.47 Aligned_cols=70 Identities=9% Similarity=0.048 Sum_probs=46.1
Q ss_pred CCeEEEEEcC-CCCEEEEEeCC-cEEEEeCCCCeeEEEEecc-CCceeEEEe-cCCC-EEEEeeCCCeEEEEecc
Q 006939 34 SGVRCLTFNP-DGRTLLCGLHE-SLKVFSWEPIRCHDAVDVG-WSRLSDLNV-HEGK-LLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 34 ~~V~sv~fsP-dg~~LvSgs~D-sIrVWdl~sg~~i~t~~~~-~s~v~~l~~-~dg~-lL~sg~~Dg~V~vWdv~ 103 (625)
.....++++| +|.++++-..+ .|..|+...+......... ......+.+ ++++ ++++-...+.|..|+.+
T Consensus 226 ~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 226 QNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYD 300 (430)
T ss_dssp SSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred CCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCC
Confidence 3456788999 67766665444 8999999876653333222 123456777 6888 55666677888888776
No 279
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=60.10 E-value=1.3e+02 Score=30.15 Aligned_cols=101 Identities=10% Similarity=0.005 Sum_probs=57.5
Q ss_pred CCEEEEEeCCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeC--C-cEEEEeCCCCeeEEEEeccCCceeE
Q 006939 3 GYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLH--E-SLKVFSWEPIRCHDAVDVGWSRLSD 79 (625)
Q Consensus 3 G~lLASGS~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~--D-sIrVWdl~sg~~i~t~~~~~s~v~~ 79 (625)
|.++.+-...+.|.++++........+.........+++.|.+.+++-+.. . .|..++.........+.........
T Consensus 91 g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Png 170 (318)
T 3sov_A 91 EKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNG 170 (318)
T ss_dssp TEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEE
T ss_pred CeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccE
Confidence 445555555667777777643322223334456789999987555554432 3 6777777643322222233334456
Q ss_pred EEe-c-CCCEEEEeeCCCeEEEEecc
Q 006939 80 LNV-H-EGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 80 l~~-~-dg~lL~sg~~Dg~V~vWdv~ 103 (625)
+.+ + ++++..+-...+.|..+|++
T Consensus 171 lavd~~~~~lY~aD~~~~~I~~~d~d 196 (318)
T 3sov_A 171 LTLDYEEQKLYWADAKLNFIHKSNLD 196 (318)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETT
T ss_pred EEEeccCCEEEEEECCCCEEEEEcCC
Confidence 666 3 44455555566778888776
No 280
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=58.96 E-value=1.3e+02 Score=34.81 Aligned_cols=101 Identities=12% Similarity=0.043 Sum_probs=60.7
Q ss_pred CCEEEEEeCCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeC---CcEEEEeCCCCeeEEEEeccCCceeE
Q 006939 3 GYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLH---ESLKVFSWEPIRCHDAVDVGWSRLSD 79 (625)
Q Consensus 3 G~lLASGS~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~---DsIrVWdl~sg~~i~t~~~~~s~v~~ 79 (625)
+.++.+-...+.|.+.++........+.......+.|++.|.+.+|+-..+ ..|.+.++........+.........
T Consensus 483 ~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~G 562 (791)
T 3m0c_C 483 SNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNG 562 (791)
T ss_dssp TEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEE
T ss_pred CcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceE
Confidence 355566666778888888744433333334456889999997555554433 26888888754444444444445566
Q ss_pred EEec--CCCEEEEeeCCCeEEEEecc
Q 006939 80 LNVH--EGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 80 l~~~--dg~lL~sg~~Dg~V~vWdv~ 103 (625)
|.+. +++++++-...+.|..++++
T Consensus 563 LavD~~~~~LYwaD~~~~~I~~~d~d 588 (791)
T 3m0c_C 563 ITLDLLSGRLYWVDSKLHSISSIDVN 588 (791)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETT
T ss_pred EEEecCCCeEEEEeCCCCcEEEEecC
Confidence 6662 45555555555677777766
No 281
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=58.53 E-value=45 Score=32.79 Aligned_cols=79 Identities=8% Similarity=-0.036 Sum_probs=45.7
Q ss_pred CCC-EEEEEeCCCeEEEEECCC-CeE--EEEeCCCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCeeEE--EEeccC
Q 006939 2 SGY-FHFSGSADRTVKFWDLET-FEL--IGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHD--AVDVGW 74 (625)
Q Consensus 2 dG~-lLASGS~D~tVkIWDL~t-g~~--i~tl~~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~i~--t~~~~~ 74 (625)
||. ++++-...+.|..||+.. +.. ...+.. ......+++.++|+++++.... .|.+|+.. ++... .+....
T Consensus 177 dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~-~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~~~~ 254 (306)
T 2p4o_A 177 FGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVE-QTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQGV 254 (306)
T ss_dssp ETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEE-SCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGGGTC
T ss_pred CCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEec-cCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeeccccc
Confidence 454 445556678899999864 321 111110 1235668899999877665544 89999976 55432 223333
Q ss_pred CceeEEEe
Q 006939 75 SRLSDLNV 82 (625)
Q Consensus 75 s~v~~l~~ 82 (625)
.....+.|
T Consensus 255 ~~p~~~a~ 262 (306)
T 2p4o_A 255 IGSTAVAF 262 (306)
T ss_dssp TTEEEEEE
T ss_pred CCceEEEE
Confidence 34455555
No 282
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=58.34 E-value=20 Score=39.74 Aligned_cols=62 Identities=10% Similarity=0.041 Sum_probs=43.6
Q ss_pred CCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCeeEEEEeccC
Q 006939 12 DRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVDVGW 74 (625)
Q Consensus 12 D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~i~t~~~~~ 74 (625)
++.|.-||+.+|+.+....... .+..-.+...+.+++.|+.| .++.||.++|+.+..+....
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~~ 527 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEHL-PLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGS 527 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEESS-CCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred cceEEEEECCCCCEEEEecCCC-CCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecCCC
Confidence 6789999999999876654322 11111112246677778888 99999999999998876543
No 283
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=57.88 E-value=55 Score=34.65 Aligned_cols=98 Identities=9% Similarity=0.094 Sum_probs=56.5
Q ss_pred CCEEEEEeCCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeCC-----cEEEEeCCCCee-EEEEeccCCc
Q 006939 3 GYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-----SLKVFSWEPIRC-HDAVDVGWSR 76 (625)
Q Consensus 3 G~lLASGS~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~D-----sIrVWdl~sg~~-i~t~~~~~s~ 76 (625)
|.++++-.. +.|+.+|+.++...... ........++|.++|.++++...+ .+..++...+.. ...+. ....
T Consensus 153 g~Lyv~D~~-~~I~~id~~~g~v~~~~-~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~~~~~~~~-~~~~ 229 (433)
T 4hw6_A 153 DDLYWVGQR-DAFRHVDFVNQYVDIKT-TNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGFTERLSLC-NARG 229 (433)
T ss_dssp CEEEEECBT-SCEEEEETTTTEEEEEC-CCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTTCCEEEEE-ECSS
T ss_pred CEEEEEeCC-CCEEEEECCCCEEEEee-cCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCeecccccc-ccCC
Confidence 455554333 78999999877765443 344668999999999966554321 233333222111 01111 2233
Q ss_pred eeEEEe-c-CCCEEEEeeCCCeEEEEecc
Q 006939 77 LSDLNV-H-EGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 77 v~~l~~-~-dg~lL~sg~~Dg~V~vWdv~ 103 (625)
...+.+ + ++.++++-..++.|+.++.+
T Consensus 230 P~giavd~~~G~lyv~d~~~~~V~~~d~~ 258 (433)
T 4hw6_A 230 AKTCAVHPQNGKIYYTRYHHAMISSYDPA 258 (433)
T ss_dssp BCCCEECTTTCCEEECBTTCSEEEEECTT
T ss_pred CCEEEEeCCCCeEEEEECCCCEEEEEECC
Confidence 445555 4 67777777677778777765
No 284
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=57.38 E-value=92 Score=31.15 Aligned_cols=99 Identities=14% Similarity=0.035 Sum_probs=53.3
Q ss_pred CCCEEEEEeCCCeEEEEECCCCeEEEEeC-C---CCCCeEEEEEcCCCCEEEEEeCCcEEEEeCCCCeeEEEEecc---C
Q 006939 2 SGYFHFSGSADRTVKFWDLETFELIGSAG-P---ETSGVRCLTFNPDGRTLLCGLHESLKVFSWEPIRCHDAVDVG---W 74 (625)
Q Consensus 2 dG~lLASGS~D~tVkIWDL~tg~~i~tl~-~---h~~~V~sv~fsPdg~~LvSgs~DsIrVWdl~sg~~i~t~~~~---~ 74 (625)
++.+++ ++.++.+.+++...|+....+. + +...+.++.|.+++.+++.+..+.| .+....|+.-..+... .
T Consensus 215 ~g~~~~-~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~g~i-~~S~DgG~tW~~~~~~~~~~ 292 (327)
T 2xbg_A 215 DGRLWM-IVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGGAGAL-LCSQDGGQTWQQDVDVKKVP 292 (327)
T ss_dssp TSCEEE-EETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEESTTCE-EEESSTTSSCEECGGGTTSS
T ss_pred CCCEEE-EeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeCCCeE-EEeCCCCcccEEcCccCCCC
Confidence 455443 3456666666422244333222 1 2346889999988888877765566 3444445432222211 2
Q ss_pred CceeEEEecCCCEEEEeeCCCeEEEEec
Q 006939 75 SRLSDLNVHEGKLLGCSYNQSCVGVWVV 102 (625)
Q Consensus 75 s~v~~l~~~dg~lL~sg~~Dg~V~vWdv 102 (625)
..+..+.+.++..++.++.+|.|.-++-
T Consensus 293 ~~~~~v~~~~~~~~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 293 SNFYKILFFSPDQGFILGQKGILLRYVT 320 (327)
T ss_dssp SCCCEEEEEETTEEEEECSTTEEEEECC
T ss_pred CCeEEEEEECCCceEEEcCCceEEEEcC
Confidence 3455666633444555667787766643
No 285
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=57.22 E-value=50 Score=32.22 Aligned_cols=100 Identities=14% Similarity=0.135 Sum_probs=52.7
Q ss_pred CCCEEEEEeCC------CeEEEEECCCCeEEEE--eCCCCCCeEEEEEcCCCCEEEEEeC----------CcEEEEeCCC
Q 006939 2 SGYFHFSGSAD------RTVKFWDLETFELIGS--AGPETSGVRCLTFNPDGRTLLCGLH----------ESLKVFSWEP 63 (625)
Q Consensus 2 dG~lLASGS~D------~tVkIWDL~tg~~i~t--l~~h~~~V~sv~fsPdg~~LvSgs~----------DsIrVWdl~s 63 (625)
++++++.|+.+ ..+.+||+.+.+-... +........++.+ ++.+++.|+. +.+.+||..+
T Consensus 101 ~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~ 178 (306)
T 3ii7_A 101 EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEA--NGLIYVCGGSLGNNVSGRVLNSCEVYDPAT 178 (306)
T ss_dssp TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEESCTTTCEECCCEEEEETTT
T ss_pred CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEE--CCEEEEECCCCCCCCcccccceEEEeCCCC
Confidence 45677777755 4588899887764332 2111111222222 5666666652 3588899887
Q ss_pred CeeEEEEeccCCc-eeEEEecCCCEEEEeeCC-----CeEEEEecc
Q 006939 64 IRCHDAVDVGWSR-LSDLNVHEGKLLGCSYNQ-----SCVGVWVVD 103 (625)
Q Consensus 64 g~~i~t~~~~~s~-v~~l~~~dg~lL~sg~~D-----g~V~vWdv~ 103 (625)
..-...-...... -..+...++++++.|+.+ ..+.+||+.
T Consensus 179 ~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~ 224 (306)
T 3ii7_A 179 ETWTELCPMIEARKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIK 224 (306)
T ss_dssp TEEEEECCCSSCCBSCEEEEETTEEEEECCEETTEEBCCEEEEETT
T ss_pred CeEEECCCccchhhcceEEEECCEEEEEeCCCCCCCCceEEEeeCC
Confidence 7544332211111 112222467777777653 246666665
No 286
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=53.52 E-value=63 Score=31.41 Aligned_cols=100 Identities=18% Similarity=0.186 Sum_probs=53.0
Q ss_pred CCCEEEEEeCC-------CeEEEEECCCCeEEEE--eCCCCCCeEEEEEcCCCCEEEEEeCC------cEEEEeCCCCee
Q 006939 2 SGYFHFSGSAD-------RTVKFWDLETFELIGS--AGPETSGVRCLTFNPDGRTLLCGLHE------SLKVFSWEPIRC 66 (625)
Q Consensus 2 dG~lLASGS~D-------~tVkIWDL~tg~~i~t--l~~h~~~V~sv~fsPdg~~LvSgs~D------sIrVWdl~sg~~ 66 (625)
++++++.|+.+ ..+.+||+.+.+-... +........++.+ ++.+++.|+.+ .+.+||..+.+.
T Consensus 155 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W 232 (302)
T 2xn4_A 155 GGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVL--NNLLYAVGGHDGPLVRKSVEVYDPTTNAW 232 (302)
T ss_dssp TTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBSSSSBCCCEEEEETTTTEE
T ss_pred CCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEE--CCEEEEECCCCCCcccceEEEEeCCCCCE
Confidence 35566666542 3477899887654322 2211122223333 56677776642 588899887665
Q ss_pred EEEEeccCCc-eeEEEecCCCEEEEeeCCC-----eEEEEecc
Q 006939 67 HDAVDVGWSR-LSDLNVHEGKLLGCSYNQS-----CVGVWVVD 103 (625)
Q Consensus 67 i~t~~~~~s~-v~~l~~~dg~lL~sg~~Dg-----~V~vWdv~ 103 (625)
...-...... -..+...++++++.|+.++ .|.+||..
T Consensus 233 ~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~ 275 (302)
T 2xn4_A 233 RQVADMNMCRRNAGVCAVNGLLYVVGGDDGSCNLASVEYYNPT 275 (302)
T ss_dssp EEECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETT
T ss_pred eeCCCCCCccccCeEEEECCEEEEECCcCCCcccccEEEEcCC
Confidence 4332211111 1122234777777777553 46777765
No 287
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=53.15 E-value=1.7e+02 Score=31.52 Aligned_cols=62 Identities=11% Similarity=0.083 Sum_probs=43.9
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCe------------EEEEe--CC----CCCCeEEEEEcCCC---CEEEEEeCC-cEEE
Q 006939 1 MSGYFHFSGSADRTVKFWDLETFE------------LIGSA--GP----ETSGVRCLTFNPDG---RTLLCGLHE-SLKV 58 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~tg~------------~i~tl--~~----h~~~V~sv~fsPdg---~~LvSgs~D-sIrV 58 (625)
|+|.+||..+. .+|.|-.+..+. ...++ .. ...+|..+.|||-| .+|+.-..| .|++
T Consensus 75 psG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~ 153 (452)
T 3pbp_A 75 TSGDLLCLFND-NEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITM 153 (452)
T ss_dssp TTSSEEEEECS-SEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEE
T ss_pred CCCCEEEEecC-CeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEE
Confidence 68999988764 578888876321 11222 11 24679999999964 577777777 9999
Q ss_pred EeCCC
Q 006939 59 FSWEP 63 (625)
Q Consensus 59 Wdl~s 63 (625)
||+..
T Consensus 154 yDl~~ 158 (452)
T 3pbp_A 154 FDILN 158 (452)
T ss_dssp EETTC
T ss_pred EEccc
Confidence 99975
No 288
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=52.33 E-value=99 Score=33.73 Aligned_cols=100 Identities=12% Similarity=0.183 Sum_probs=61.4
Q ss_pred CCEEEEEeCCCeEEEEECCCCeEEEEeCC---CCCCeEEEEE-------cCCCCEEEEEeCC--------cEEEEeCCC-
Q 006939 3 GYFHFSGSADRTVKFWDLETFELIGSAGP---ETSGVRCLTF-------NPDGRTLLCGLHE--------SLKVFSWEP- 63 (625)
Q Consensus 3 G~lLASGS~D~tVkIWDL~tg~~i~tl~~---h~~~V~sv~f-------sPdg~~LvSgs~D--------sIrVWdl~s- 63 (625)
+.++++......|++.|+.++.+...+.. .....+.|+| +++|.+++.+... .+.+++...
T Consensus 152 ~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~ 231 (496)
T 3kya_A 152 DHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNAD 231 (496)
T ss_dssp EEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTT
T ss_pred CEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCC
Confidence 45556655556788889988776554432 1235899999 9999966655432 255665333
Q ss_pred CeeE-----EEEeccCCceeEEEe-c-CCCEEEEeeCCCeEEEEecc
Q 006939 64 IRCH-----DAVDVGWSRLSDLNV-H-EGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 64 g~~i-----~t~~~~~s~v~~l~~-~-dg~lL~sg~~Dg~V~vWdv~ 103 (625)
+... ..+. .+..+..+.+ + ++.++++-..++.|..||++
T Consensus 232 G~~~~~~~~~~v~-~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~ 277 (496)
T 3kya_A 232 GTFDDRSDIQLIA-AYKQCNGATIHPINGELYFNSYEKGQVFRLDLV 277 (496)
T ss_dssp SCCSTTSCEEEEE-EESCCCCEEECTTTCCEEEEETTTTEEEEECHH
T ss_pred Cceeecccceeec-cCCCceEEEEcCCCCeEEEEECCCCEEEEEecc
Confidence 2221 2222 2333445555 4 56777888888889888876
No 289
>1juq_A ADP-ribosylation factor binding protein GGA3; protein-peptide compelx, VHS domain, DXXLL sorting signal, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.9.2 PDB: 1jpl_A 1lf8_A*
Probab=52.25 E-value=53 Score=30.55 Aligned_cols=79 Identities=11% Similarity=0.125 Sum_probs=60.4
Q ss_pred HhhcCCHHHHHHHHHh----cCCchhHHHHHHHHHhcccccchhhHHhhHHHHHHhhccCCchhHHHHHHHHHHHHHHHH
Q 006939 485 YWERNDVKGAISAMQK----MADHTVLADVMSIVVEKIEIVTLDICSCLLPLLTGLLESDMDRHLSISLDILLKLVRTFG 560 (625)
Q Consensus 485 ~W~~~dik~ai~~~~~----~~D~~VlvD~L~~l~~~~~~~tLd~c~~lLP~i~~LL~Sk~E~~v~~al~~l~~i~~~F~ 560 (625)
-|....+...|+.+.. -.|.+...|+-..|+.+.. ..-..+-.|.+-|+++...-+..||.+|..++++.|
T Consensus 8 ~~~~s~~~~~IekATs~~l~~~Dw~~ileicD~I~~~~~-----~~k~A~ral~krl~~~n~~vql~AL~LLd~~vkNCG 82 (171)
T 1juq_A 8 EAEGESLESWLNKATNPSNRQEDWEYIIGFCDQINKELE-----GPQIAVRLLAHKIQSPQEWEALQALTVLEACMKNCG 82 (171)
T ss_dssp ----CCHHHHHHHHTCTTCSSCCHHHHHHHHHHHHHSTT-----HHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSH
T ss_pred CCCCCcHHHHHHHHcCCCCCCcCHHHHHHHHHHHHcCCc-----cHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHcC
Confidence 3555566677776654 4799998898888888753 466677789999999988888999999999999999
Q ss_pred HHHHHhhc
Q 006939 561 SMIYSAIS 568 (625)
Q Consensus 561 ~~I~~~~~ 568 (625)
..++..+.
T Consensus 83 ~~Fh~eva 90 (171)
T 1juq_A 83 RRFHNEVG 90 (171)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHh
Confidence 98886553
No 290
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=51.96 E-value=1.1e+02 Score=34.45 Aligned_cols=99 Identities=13% Similarity=0.192 Sum_probs=60.3
Q ss_pred CCCEEEEEeCCCeEEEEECCCCeEEEEeC--CCCCCeEEEEEcCCCCEEEEEeCCcEEEEeCCCCeeEEEEecc-----C
Q 006939 2 SGYFHFSGSADRTVKFWDLETFELIGSAG--PETSGVRCLTFNPDGRTLLCGLHESLKVFSWEPIRCHDAVDVG-----W 74 (625)
Q Consensus 2 dG~lLASGS~D~tVkIWDL~tg~~i~tl~--~h~~~V~sv~fsPdg~~LvSgs~DsIrVWdl~sg~~i~t~~~~-----~ 74 (625)
+|.+.+ |..++-+..||..+++...... .....|.++...++|.+.+... +.|.+|+..+++........ .
T Consensus 417 ~g~lWi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~ 494 (781)
T 3v9f_A 417 EGNLWF-GTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWIGTH-AGVFVIDLASKKVIHHYDTSNSQLLE 494 (781)
T ss_dssp TSCEEE-EETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEEEET-TEEEEEESSSSSCCEEECTTTSSCSC
T ss_pred CCCEEE-EeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEEEEC-CceEEEeCCCCeEEecccCccccccc
Confidence 344444 5555668888887776543221 2346799999888887666543 67888998876554332211 2
Q ss_pred CceeEEEe-cCCCEEEEeeCCCeEEEEecc
Q 006939 75 SRLSDLNV-HEGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 75 s~v~~l~~-~dg~lL~sg~~Dg~V~vWdv~ 103 (625)
..+.++.. .+|.+.+....+| +..||.+
T Consensus 495 ~~i~~i~~d~~g~lWigt~~~G-l~~~~~~ 523 (781)
T 3v9f_A 495 NFVRSIAQDSEGRFWIGTFGGG-VGIYTPD 523 (781)
T ss_dssp SCEEEEEECTTCCEEEEESSSC-EEEECTT
T ss_pred ceeEEEEEcCCCCEEEEEcCCC-EEEEeCC
Confidence 45666665 5676665544344 6667765
No 291
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=51.94 E-value=90 Score=30.20 Aligned_cols=100 Identities=14% Similarity=0.078 Sum_probs=52.5
Q ss_pred CCCEEEEEeCC-----CeEEEEECCCCe---E--EEEeCCCCCCeEEEEEcCCCCEEEEEeCC------cEEEEeCCCCe
Q 006939 2 SGYFHFSGSAD-----RTVKFWDLETFE---L--IGSAGPETSGVRCLTFNPDGRTLLCGLHE------SLKVFSWEPIR 65 (625)
Q Consensus 2 dG~lLASGS~D-----~tVkIWDL~tg~---~--i~tl~~h~~~V~sv~fsPdg~~LvSgs~D------sIrVWdl~sg~ 65 (625)
++.+++.|+.+ ..+.+||+.+.+ - +..+........++.+ ++.+++.|+.+ .+.+||..+..
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~ 139 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQ 139 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCCe
Confidence 45667777754 358889988765 2 3222221122222333 56666666532 47888888766
Q ss_pred eEEEEeccCCce-eEEEecCCCEEEEeeCC-----CeEEEEecc
Q 006939 66 CHDAVDVGWSRL-SDLNVHEGKLLGCSYNQ-----SCVGVWVVD 103 (625)
Q Consensus 66 ~i~t~~~~~s~v-~~l~~~dg~lL~sg~~D-----g~V~vWdv~ 103 (625)
....-....... ..+...++++++.|+.+ ..+.+||+.
T Consensus 140 W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~ 183 (301)
T 2vpj_A 140 WSMLGDMQTAREGAGLVVASGVIYCLGGYDGLNILNSVEKYDPH 183 (301)
T ss_dssp EEEEEECSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETT
T ss_pred EEECCCCCCCcccceEEEECCEEEEECCCCCCcccceEEEEeCC
Confidence 543322211111 11222467777777654 346666654
No 292
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=51.86 E-value=1.1e+02 Score=30.15 Aligned_cols=75 Identities=9% Similarity=0.128 Sum_probs=53.1
Q ss_pred EeCCCCCCeEEEEEcCCCCEEEEEe-CC-cEEEEeCCCCeeEEEEecc-CCceeEEEe-cCCCEEEEeeCCCeEEEEecc
Q 006939 28 SAGPETSGVRCLTFNPDGRTLLCGL-HE-SLKVFSWEPIRCHDAVDVG-WSRLSDLNV-HEGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 28 tl~~h~~~V~sv~fsPdg~~LvSgs-~D-sIrVWdl~sg~~i~t~~~~-~s~v~~l~~-~dg~lL~sg~~Dg~V~vWdv~ 103 (625)
.+.+-...+..++|+|++..|++.. .+ .|...|.. ++.++.+... +.-.-.+.+ .++.++++.-.++.+.++++.
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~ 99 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLT 99 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEEC
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcC
Confidence 4556667899999999877666544 44 78888988 8887777543 344556665 567766766666788888776
No 293
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=51.69 E-value=99 Score=29.95 Aligned_cols=100 Identities=14% Similarity=0.146 Sum_probs=52.4
Q ss_pred CCCEEEEEeCCC-----eEEEEECCCCeEEEE--eCCCCCCeEEEEEcCCCCEEEEEeC--------CcEEEEeCCCCee
Q 006939 2 SGYFHFSGSADR-----TVKFWDLETFELIGS--AGPETSGVRCLTFNPDGRTLLCGLH--------ESLKVFSWEPIRC 66 (625)
Q Consensus 2 dG~lLASGS~D~-----tVkIWDL~tg~~i~t--l~~h~~~V~sv~fsPdg~~LvSgs~--------DsIrVWdl~sg~~ 66 (625)
++++++.|+.++ .+.+||+.+.+-... +........++.+ ++.+++.|+. +.+.+||..+...
T Consensus 108 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W 185 (302)
T 2xn4_A 108 NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVV--GGLLYAVGGYDVASRQCLSTVECYNATTNEW 185 (302)
T ss_dssp TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTTTEECCCEEEEETTTTEE
T ss_pred CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEE--CCEEEEEeCCCCCCCccccEEEEEeCCCCcE
Confidence 456777777553 467888887664322 2211112222222 5666666553 2488889887665
Q ss_pred EEEEeccCCc-eeEEEecCCCEEEEeeCCC-----eEEEEecc
Q 006939 67 HDAVDVGWSR-LSDLNVHEGKLLGCSYNQS-----CVGVWVVD 103 (625)
Q Consensus 67 i~t~~~~~s~-v~~l~~~dg~lL~sg~~Dg-----~V~vWdv~ 103 (625)
...-...... ...+...++++++.|+.++ .+.+||+.
T Consensus 186 ~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~ 228 (302)
T 2xn4_A 186 TYIAEMSTRRSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPT 228 (302)
T ss_dssp EEECCCSSCCBSCEEEEETTEEEEECCBSSSSBCCCEEEEETT
T ss_pred EECCCCccccccccEEEECCEEEEECCCCCCcccceEEEEeCC
Confidence 4332111111 1122234677777776543 56677665
No 294
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=50.79 E-value=1.9e+02 Score=29.22 Aligned_cols=61 Identities=10% Similarity=0.083 Sum_probs=37.2
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCeE--EEEeC---CCCCCeEEEEEcCC---CCEEE-EEeC------CcEEEEeCCCC
Q 006939 1 MSGYFHFSGSADRTVKFWDLETFEL--IGSAG---PETSGVRCLTFNPD---GRTLL-CGLH------ESLKVFSWEPI 64 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~tg~~--i~tl~---~h~~~V~sv~fsPd---g~~Lv-Sgs~------DsIrVWdl~sg 64 (625)
|||.++++- .++.|.+++ .++. +..+. .-......|+|+|+ +.+|+ +-.. +.|..|+...+
T Consensus 40 pdG~l~V~e-~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~~~ 115 (352)
T 2ism_A 40 PDGGMLIAE-RPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGE 115 (352)
T ss_dssp TTSCEEEEE-TTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEECSS
T ss_pred CCCeEEEEe-CCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEEeCCC
Confidence 688876664 568899888 4442 22222 12356889999998 44444 3332 35667777643
No 295
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=50.18 E-value=81 Score=31.08 Aligned_cols=98 Identities=12% Similarity=0.008 Sum_probs=58.4
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCeE------EEEeCC-CCCCeEEEEEcCCCCEEEEEeCCcEEEEeCCCCee-------
Q 006939 1 MSGYFHFSGSADRTVKFWDLETFEL------IGSAGP-ETSGVRCLTFNPDGRTLLCGLHESLKVFSWEPIRC------- 66 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~tg~~------i~tl~~-h~~~V~sv~fsPdg~~LvSgs~DsIrVWdl~sg~~------- 66 (625)
|.+.+|+....| +|..=....+.. ...+.. --..+.+++|+|+|.+.+. ..+.|.-.+..+..+
T Consensus 2 ~~~~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~iG~~gw~~~~~laf~P~G~LYaV-~~G~Ly~~~~~t~~~~~W~~s~ 79 (236)
T 1tl2_A 2 GGESMLRGVYQD-KFYQGTYPQNKNDNWLARATLIGKGGWSNFKFLFLSPGGELYGV-LNDKIYKGTPPTHDNDNWMGRA 79 (236)
T ss_dssp CCCCCEEEEETT-EEEEESCCCSTTCCHHHHSEEEESSSCTTCSEEEECTTSCEEEE-ETTEEEEESCCCSTTCCHHHHC
T ss_pred CcceEEEEEeCC-cEEecCCCCCcccchhhhccccCccccccceeEEECCCccEEEE-eCCeEEEECCCCCCcccccccc
Confidence 346677888888 766655544431 222222 1246789999999987666 555654444433111
Q ss_pred EEEEeccCCceeEEEe-cCCCEEEEeeCCCeEEEEec
Q 006939 67 HDAVDVGWSRLSDLNV-HEGKLLGCSYNQSCVGVWVV 102 (625)
Q Consensus 67 i~t~~~~~s~v~~l~~-~dg~lL~sg~~Dg~V~vWdv 102 (625)
..+=..+|..-..+.| ++|.+.++ .|+.|+-|+-
T Consensus 80 t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~p 114 (236)
T 1tl2_A 80 KKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASP 114 (236)
T ss_dssp EEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESC
T ss_pred cEecccccccceEEEECCCCCEEEe--CCCEEEEeCC
Confidence 1222346766677777 67877777 5588876653
No 296
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=48.84 E-value=2.2e+02 Score=28.46 Aligned_cols=91 Identities=9% Similarity=-0.074 Sum_probs=50.9
Q ss_pred CCeEEEEECCCCeEEEE-eCCCCCCeEEEEEcCCCCEEEEEeC-C-cEEEEeCCCCeeEEEEeccCCceeEEEecCCCEE
Q 006939 12 DRTVKFWDLETFELIGS-AGPETSGVRCLTFNPDGRTLLCGLH-E-SLKVFSWEPIRCHDAVDVGWSRLSDLNVHEGKLL 88 (625)
Q Consensus 12 D~tVkIWDL~tg~~i~t-l~~h~~~V~sv~fsPdg~~LvSgs~-D-sIrVWdl~sg~~i~t~~~~~s~v~~l~~~dg~lL 88 (625)
...|...++. |..... +...-.....++|++++..|+-+.. . .|..+++..................+.+..+.++
T Consensus 144 ~~~I~r~~~d-G~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~~~~ly 222 (318)
T 3sov_A 144 VPKIERAGMD-GSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFEDILY 222 (318)
T ss_dssp SCEEEEEETT-SCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEETTEEE
T ss_pred CCEEEEEEcC-CCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEeCCEEE
Confidence 4556666665 222222 2222344678999997766655444 3 7999998753332222223334445555555666
Q ss_pred EEeeCCCeEEEEecc
Q 006939 89 GCSYNQSCVGVWVVD 103 (625)
Q Consensus 89 ~sg~~Dg~V~vWdv~ 103 (625)
.+-...+.|..++..
T Consensus 223 wtd~~~~~V~~~~~~ 237 (318)
T 3sov_A 223 WTDWSTHSILACNKY 237 (318)
T ss_dssp EEETTTTEEEEEETT
T ss_pred EEecCCCeEEEEECC
Confidence 666666777777653
No 297
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=48.40 E-value=1e+02 Score=29.88 Aligned_cols=100 Identities=9% Similarity=0.127 Sum_probs=51.6
Q ss_pred CCCEEEEEeCC----CeEEEEECCCCeEEEE--eCCCCCCeEEEEEcCCCCEEEEEeCC-------cEEEEeCCCCeeEE
Q 006939 2 SGYFHFSGSAD----RTVKFWDLETFELIGS--AGPETSGVRCLTFNPDGRTLLCGLHE-------SLKVFSWEPIRCHD 68 (625)
Q Consensus 2 dG~lLASGS~D----~tVkIWDL~tg~~i~t--l~~h~~~V~sv~fsPdg~~LvSgs~D-------sIrVWdl~sg~~i~ 68 (625)
++.+++.|+.+ ..+.+||+.+.+-... +........++.+ ++.+++.|+.+ .+.+||..+.....
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~ 132 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHT 132 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEE
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEe
Confidence 45677777754 5678899888764322 2211112222223 56666666532 48888988766443
Q ss_pred EEeccCCce-eEEEecCCCEEEEeeC---------CCeEEEEecc
Q 006939 69 AVDVGWSRL-SDLNVHEGKLLGCSYN---------QSCVGVWVVD 103 (625)
Q Consensus 69 t~~~~~s~v-~~l~~~dg~lL~sg~~---------Dg~V~vWdv~ 103 (625)
.-....... ..+...++++++.|+. -..+.+||..
T Consensus 133 ~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~ 177 (306)
T 3ii7_A 133 KPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPA 177 (306)
T ss_dssp ECCCSSCCBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETT
T ss_pred CCCCcCCcceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCC
Confidence 322111110 1122246666666653 2346666655
No 298
>1x5b_A Signal transducing adaptor molecule 2; VHS domain, ubiquitin binding, STAM2, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2l0t_B
Probab=48.32 E-value=41 Score=31.05 Aligned_cols=75 Identities=12% Similarity=0.119 Sum_probs=57.5
Q ss_pred cCCHHHHHHHHHh----cCCchhHHHHHHHHHhcccccchhhHHhhHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHHH
Q 006939 488 RNDVKGAISAMQK----MADHTVLADVMSIVVEKIEIVTLDICSCLLPLLTGLLESDMDRHLSISLDILLKLVRTFGSMI 563 (625)
Q Consensus 488 ~~dik~ai~~~~~----~~D~~VlvD~L~~l~~~~~~~tLd~c~~lLP~i~~LL~Sk~E~~v~~al~~l~~i~~~F~~~I 563 (625)
.+-+...|+.+.. -.|++...|+-..|+... +..-+.+-.|.+-|+++...-+..||.+|..++++.|+.+
T Consensus 13 ~~p~~~~IekATs~~~~~~Dw~~~leicD~I~~~~-----~~~keA~ral~krl~~~n~~vql~AL~LLd~~vkNcG~~F 87 (163)
T 1x5b_A 13 ANPFEQDVEKATNEYNTTEDWSLIMDICDKVGSTP-----NGAKDCLKAIMKRVNHKVPHVALQALTLLGACVANCGKIF 87 (163)
T ss_dssp CCTTHHHHHHHTCTTCSSCCHHHHHHHHHHHHHSS-----SHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHTCHHH
T ss_pred CChHHHHHHHHcCCCCCCcCHHHHHHHHHHHhCCC-----ccHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhHHH
Confidence 3444455555543 468888888888887764 3567777888999999998888899999999999988877
Q ss_pred HHhh
Q 006939 564 YSAI 567 (625)
Q Consensus 564 ~~~~ 567 (625)
+..+
T Consensus 88 h~ev 91 (163)
T 1x5b_A 88 HLEV 91 (163)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7554
No 299
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=46.69 E-value=2.8e+02 Score=29.03 Aligned_cols=100 Identities=12% Similarity=0.074 Sum_probs=64.1
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeCCcEEEEeCCC-CeeEEEEec----cCC
Q 006939 1 MSGYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFSWEP-IRCHDAVDV----GWS 75 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~DsIrVWdl~s-g~~i~t~~~----~~s 75 (625)
|..+.+|-=. .+++.|+|+++.+.+..+.- ...|..-.|-.+. .|+--....+.-|+++. ....+.+.- ...
T Consensus 76 P~~~ViALra-g~~LQiFnletK~klks~~~-~e~VvfWkWis~~-~L~lVT~taVyHWs~~~~s~P~kvFdR~~~L~~~ 152 (365)
T 2xzh_A 76 PASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLN-TVALVTDNAVYHWSMEGESQPVKMFDRHSSLAGC 152 (365)
T ss_dssp SSSSEEEEEE-TTEEEEEETTTTEEEEEEEC-SSCEEEEEECSSS-EEEEEESSEEEEEESSTTCCCEEEEECCGGGTTC
T ss_pred CCccEEEEec-CCeEEEechHHhhhhcceec-CCccEEEEecCCC-eEEEEcCCcEEEEcccCCCCCceeeecchhcccc
Confidence 4566676665 67899999999998877654 3688889998655 33333445899999874 234444432 234
Q ss_pred ceeEEEe-cCCCEE-EEee------CCCeEEEEecc
Q 006939 76 RLSDLNV-HEGKLL-GCSY------NQSCVGVWVVD 103 (625)
Q Consensus 76 ~v~~l~~-~dg~lL-~sg~------~Dg~V~vWdv~ 103 (625)
++..+.. ++.+++ ++|- -.|.+.+|.++
T Consensus 153 QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~e 188 (365)
T 2xzh_A 153 QIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVD 188 (365)
T ss_dssp EEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETT
T ss_pred eEEEEEECCCCCEEEEEeEeccCCccceeEEEEeec
Confidence 4555554 566665 3332 23577888777
No 300
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=46.66 E-value=85 Score=30.78 Aligned_cols=100 Identities=15% Similarity=0.177 Sum_probs=51.2
Q ss_pred CCCEEEEEeCC--------CeEEEEECCCCeEEEE--eCCCCCCeEEEEEcCCCCEEEEEeC-------CcEEEEeCCCC
Q 006939 2 SGYFHFSGSAD--------RTVKFWDLETFELIGS--AGPETSGVRCLTFNPDGRTLLCGLH-------ESLKVFSWEPI 64 (625)
Q Consensus 2 dG~lLASGS~D--------~tVkIWDL~tg~~i~t--l~~h~~~V~sv~fsPdg~~LvSgs~-------DsIrVWdl~sg 64 (625)
++.+++.|+.+ ..+.+||+.+.+-... +........++. -++.+++.|+. +.+.+||..+.
T Consensus 98 ~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~~ 175 (315)
T 4asc_A 98 LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS--HMDLVYVIGGKGSDRKCLNKMCVYDPKKF 175 (315)
T ss_dssp TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCTTSCBCCCEEEEETTTT
T ss_pred CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE--ECCEEEEEeCCCCCCcccceEEEEeCCCC
Confidence 35566666632 3578899887653221 211111122222 35666666665 24888888876
Q ss_pred eeEEEEeccCCc-eeEEEecCCCEEEEeeCCC-----eEEEEecc
Q 006939 65 RCHDAVDVGWSR-LSDLNVHEGKLLGCSYNQS-----CVGVWVVD 103 (625)
Q Consensus 65 ~~i~t~~~~~s~-v~~l~~~dg~lL~sg~~Dg-----~V~vWdv~ 103 (625)
+-...-...... ...+...++++++.|+.++ .+.+||+.
T Consensus 176 ~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~ 220 (315)
T 4asc_A 176 EWKELAPMQTARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSIT 220 (315)
T ss_dssp EEEECCCCSSCCBSCEEEEETTEEEEEEEECSSSEEEEEEEEETT
T ss_pred eEEECCCCCCchhceEEEEECCEEEEEeccCCCCccceEEEEECC
Confidence 543322211111 1122234677777776644 45666654
No 301
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=45.77 E-value=1e+02 Score=30.16 Aligned_cols=91 Identities=16% Similarity=0.087 Sum_probs=46.9
Q ss_pred CCCEEEEEeC-C-----CeEEEEECCCCeEEEE--eCCCCCCeEEEEEcCCCCEEEEEeCC------cEEEEeCCCCeeE
Q 006939 2 SGYFHFSGSA-D-----RTVKFWDLETFELIGS--AGPETSGVRCLTFNPDGRTLLCGLHE------SLKVFSWEPIRCH 67 (625)
Q Consensus 2 dG~lLASGS~-D-----~tVkIWDL~tg~~i~t--l~~h~~~V~sv~fsPdg~~LvSgs~D------sIrVWdl~sg~~i 67 (625)
++++++.|+. + ..+.+||+.+.+-... +........++.+ ++.+++.|+.+ .+.+||..+.+..
T Consensus 148 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~ 225 (315)
T 4asc_A 148 MDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSITDNKWA 225 (315)
T ss_dssp TTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETTTTEEE
T ss_pred CCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEE--CCEEEEEeccCCCCccceEEEEECCCCeEE
Confidence 4566677765 2 3578899887654322 1111111222223 66677766643 3778888876554
Q ss_pred EEEeccCCce-eEEEecCCCEEEEeeCC
Q 006939 68 DAVDVGWSRL-SDLNVHEGKLLGCSYNQ 94 (625)
Q Consensus 68 ~t~~~~~s~v-~~l~~~dg~lL~sg~~D 94 (625)
..-....... ..+...++++++.|+.+
T Consensus 226 ~~~~~p~~r~~~~~~~~~~~l~v~GG~~ 253 (315)
T 4asc_A 226 PFEAFPQERSSLSLVSLVGTLYAIGGFA 253 (315)
T ss_dssp EECCCSSCCBSCEEEEETTEEEEEEEEE
T ss_pred ECCCCCCcccceeEEEECCEEEEECCcc
Confidence 3322111111 12223467777777653
No 302
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=45.42 E-value=1.8e+02 Score=30.24 Aligned_cols=98 Identities=15% Similarity=0.198 Sum_probs=63.8
Q ss_pred EEEEEeCCCeEEEEEC-------CCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCC-----CeeEEEEe
Q 006939 5 FHFSGSADRTVKFWDL-------ETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEP-----IRCHDAVD 71 (625)
Q Consensus 5 lLASGS~D~tVkIWDL-------~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~s-----g~~i~t~~ 71 (625)
+++....++.+..|++ -+.+.++++..- +.+-.+...+....|+.+-.+ .|..|+.++ ++.+..+.
T Consensus 145 yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lg-sq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~ 223 (355)
T 3amr_A 145 YAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMN-SQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRAD 223 (355)
T ss_dssp EEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECS-SCEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBS
T ss_pred EEEEECCCCeEEEEEEEeCCCCcccceEEEEecCC-CCcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEec
Confidence 5666777899999988 234567777543 567778888888899999888 777777652 34444442
Q ss_pred cc-C-CceeEEEe---cCCC--EEEEeeCCCeEEEEecc
Q 006939 72 VG-W-SRLSDLNV---HEGK--LLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 72 ~~-~-s~v~~l~~---~dg~--lL~sg~~Dg~V~vWdv~ 103 (625)
.+ . .-+..+.+ ++++ +++++-.++.+.+||..
T Consensus 224 ~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 224 GRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp SSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred CCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence 21 1 12444544 3333 45555466799999885
No 303
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=45.09 E-value=2.5e+02 Score=30.51 Aligned_cols=60 Identities=15% Similarity=0.126 Sum_probs=39.7
Q ss_pred CCCEEEEEeCCCeEEEEECC-------CCeE--------------EEEeCCCCCCeEEEEEcCCCCEEEEEeC-C-cEEE
Q 006939 2 SGYFHFSGSADRTVKFWDLE-------TFEL--------------IGSAGPETSGVRCLTFNPDGRTLLCGLH-E-SLKV 58 (625)
Q Consensus 2 dG~lLASGS~D~tVkIWDL~-------tg~~--------------i~tl~~h~~~V~sv~fsPdg~~LvSgs~-D-sIrV 58 (625)
++.++++-..++.|..+|+. ++.. +.... .....+.|+|+|+|.+|+.+.. . .|+.
T Consensus 258 ~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~-~~~~p~~ia~~p~G~~lYvaD~~~h~I~k 336 (496)
T 3kya_A 258 NGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIA-DPSWEFQIFIHPTGKYAYFGVINNHYFMR 336 (496)
T ss_dssp TCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECS-SSSCCEEEEECTTSSEEEEEETTTTEEEE
T ss_pred CCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecC-CCCCceEEEEcCCCCEEEEEeCCCCEEEE
Confidence 56777777788889999987 5543 22222 2234578999999996554443 3 7888
Q ss_pred EeCC
Q 006939 59 FSWE 62 (625)
Q Consensus 59 Wdl~ 62 (625)
+++.
T Consensus 337 id~d 340 (496)
T 3kya_A 337 SDYD 340 (496)
T ss_dssp EEEE
T ss_pred EecC
Confidence 6553
No 304
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=44.58 E-value=2.8e+02 Score=28.54 Aligned_cols=89 Identities=10% Similarity=-0.029 Sum_probs=52.3
Q ss_pred CeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeCC--cEEEEeCCCCeeEEEEec--cCCceeEEEecCCCEE
Q 006939 13 RTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE--SLKVFSWEPIRCHDAVDV--GWSRLSDLNVHEGKLL 88 (625)
Q Consensus 13 ~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~D--sIrVWdl~sg~~i~t~~~--~~s~v~~l~~~dg~lL 88 (625)
..|...++........+.........|+|.+++..|+-+... .|..+|+........... .+.....+.+.++.++
T Consensus 225 ~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~~~~ly 304 (400)
T 3p5b_L 225 AKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVF 304 (400)
T ss_dssp CCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEETTEEE
T ss_pred CEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEeCCEEE
Confidence 456666665332222223333457889999887766655443 799999875443333322 2344455555566666
Q ss_pred EEeeCCCeEEEEe
Q 006939 89 GCSYNQSCVGVWV 101 (625)
Q Consensus 89 ~sg~~Dg~V~vWd 101 (625)
.+-...+.|..++
T Consensus 305 wtd~~~~~V~~~~ 317 (400)
T 3p5b_L 305 WTDIINEAIFSAN 317 (400)
T ss_dssp EEESSSCSEEEEE
T ss_pred EecCCCCeEEEEE
Confidence 6666667777776
No 305
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=44.37 E-value=4.2e+02 Score=30.45 Aligned_cols=99 Identities=10% Similarity=0.020 Sum_probs=54.4
Q ss_pred CCEEEEEeCC-CeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeCC--cEEEEeCCCCeeEEEEec--cCCce
Q 006939 3 GYFHFSGSAD-RTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE--SLKVFSWEPIRCHDAVDV--GWSRL 77 (625)
Q Consensus 3 G~lLASGS~D-~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~D--sIrVWdl~sg~~i~t~~~--~~s~v 77 (625)
|.++.+-... ..|...++........+.........|++.+.+..|+-+..+ .|..+++........+.. .+...
T Consensus 526 g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P 605 (791)
T 3m0c_C 526 GFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHP 605 (791)
T ss_dssp TEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSE
T ss_pred CCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCC
Confidence 4444443222 566666765333322333333567889999876666655443 798999875544433332 34444
Q ss_pred eEEEecCCCEEEEeeCCCeEEEEe
Q 006939 78 SDLNVHEGKLLGCSYNQSCVGVWV 101 (625)
Q Consensus 78 ~~l~~~dg~lL~sg~~Dg~V~vWd 101 (625)
..|.+..+.++++-...+.|...+
T Consensus 606 ~glav~~~~lYwtD~~~~~I~~~d 629 (791)
T 3m0c_C 606 FSLAVFEDKVFWTDIINEAIFSAN 629 (791)
T ss_dssp EEEEEETTEEEEEETTTTEEEEEE
T ss_pred CEEEEeCCEEEEEECCCCEEEEEe
Confidence 455554555555555555555554
No 306
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=43.97 E-value=54 Score=36.73 Aligned_cols=92 Identities=15% Similarity=0.196 Sum_probs=60.5
Q ss_pred CCCCEEEEEe-CCCeEEEEECCCC------eE-------EEEeCCCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCC-
Q 006939 1 MSGYFHFSGS-ADRTVKFWDLETF------EL-------IGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPI- 64 (625)
Q Consensus 1 PdG~lLASGS-~D~tVkIWDL~tg------~~-------i~tl~~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg- 64 (625)
|||++++.++ .+.+|.++|+++. +. ....+ -.-+..-.+|.++|..+.|.--| .|.-|++...
T Consensus 332 PDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~~G~aYTtlfidSqvvkWni~~a~ 410 (638)
T 3sbq_A 332 SDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDGRGNAYTTLFIDSQVVKWNMEEAV 410 (638)
T ss_dssp TTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECSSSEEEEEETTTTEEEEEEHHHHH
T ss_pred CCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECCCCceEeeeeecceEEEEeccHHH
Confidence 7898886655 7889999998742 11 22222 23567788999999555555567 8999998642
Q ss_pred ---------eeEEEEeccCCceeEEEe------cCCCEEEEeeC
Q 006939 65 ---------RCHDAVDVGWSRLSDLNV------HEGKLLGCSYN 93 (625)
Q Consensus 65 ---------~~i~t~~~~~s~v~~l~~------~dg~lL~sg~~ 93 (625)
..++.+.++..+-..... ++|++|++...
T Consensus 411 ~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~lnK 454 (638)
T 3sbq_A 411 RAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALSK 454 (638)
T ss_dssp HHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEES
T ss_pred HHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEecc
Confidence 456667777654333221 57888887654
No 307
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=43.08 E-value=2.5e+02 Score=27.51 Aligned_cols=61 Identities=10% Similarity=0.097 Sum_probs=44.0
Q ss_pred CCEEEEEeCCCeEEEEECCCCeEEEEe--CCCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCe
Q 006939 3 GYFHFSGSADRTVKFWDLETFELIGSA--GPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIR 65 (625)
Q Consensus 3 G~lLASGS~D~tVkIWDL~tg~~i~tl--~~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~ 65 (625)
+.+++....++.|...|+. ++.++.+ .+. ...-.|++.+++.++++.-.+ .+.++++....
T Consensus 39 ~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~-~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~ 102 (255)
T 3qqz_A 39 NTLFSTINKPAAIVEMTTN-GDLIRTIPLDFV-KDLETIEYIGDNQFVISDERDYAIYVISLTPNS 102 (255)
T ss_dssp TEEEEEEETTEEEEEEETT-CCEEEEEECSSC-SSEEEEEECSTTEEEEEETTTTEEEEEEECTTC
T ss_pred CEEEEEECCCCeEEEEeCC-CCEEEEEecCCC-CChHHeEEeCCCEEEEEECCCCcEEEEEcCCCC
Confidence 4456667778888888988 8887776 332 567788888888877765445 78888876533
No 308
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=43.00 E-value=1.5e+02 Score=33.32 Aligned_cols=99 Identities=10% Similarity=0.085 Sum_probs=58.5
Q ss_pred CCCEEEEEeCCCeEEEEECCCCeEEEEeCCC-----CCCeEEEEEcCCCCEEEEEeCCcEEEEeCCCCeeEEEEe---cc
Q 006939 2 SGYFHFSGSADRTVKFWDLETFELIGSAGPE-----TSGVRCLTFNPDGRTLLCGLHESLKVFSWEPIRCHDAVD---VG 73 (625)
Q Consensus 2 dG~lLASGS~D~tVkIWDL~tg~~i~tl~~h-----~~~V~sv~fsPdg~~LvSgs~DsIrVWdl~sg~~i~t~~---~~ 73 (625)
+|.+.+. .. +-|..||..+++........ ...|.++...++|.+.+....+.|..|+...++...... ..
T Consensus 460 ~g~lwig-t~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~l~ 537 (781)
T 3v9f_A 460 NKKIWIG-TH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGGVGIYTPDMQLVRKFNQYEGFC 537 (781)
T ss_dssp TSEEEEE-ET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSCEEEECTTCCEEEEECTTTTCS
T ss_pred CCCEEEE-EC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCCEEEEeCCCCeEEEccCCCCCC
Confidence 3444443 33 45778888876653332222 357899999999987765543467788887665433211 12
Q ss_pred CCceeEEEe-cCCCEEEEeeCCCeEEEEecc
Q 006939 74 WSRLSDLNV-HEGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 74 ~s~v~~l~~-~dg~lL~sg~~Dg~V~vWdv~ 103 (625)
...+..+.. .+|.+.++.. +|.|..||..
T Consensus 538 ~~~i~~i~~d~~g~lWi~T~-~Glv~~~d~~ 567 (781)
T 3v9f_A 538 SNTINQIYRSSKGQMWLATG-EGLVCFPSAR 567 (781)
T ss_dssp CSCEEEEEECTTSCEEEEET-TEEEEESCTT
T ss_pred CCeeEEEEECCCCCEEEEEC-CCceEEECCC
Confidence 234566665 4666665544 5654777765
No 309
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=41.43 E-value=2.5e+02 Score=29.14 Aligned_cols=97 Identities=6% Similarity=0.123 Sum_probs=58.5
Q ss_pred CCEEEEEeCCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCC----CC---E-EEEEeC--C-cEEEEeCC--CCeeEEE
Q 006939 3 GYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPD----GR---T-LLCGLH--E-SLKVFSWE--PIRCHDA 69 (625)
Q Consensus 3 G~lLASGS~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPd----g~---~-LvSgs~--D-sIrVWdl~--sg~~i~t 69 (625)
..++++...++-+.+||+ +|+.+..+.. +.+..+.+-|+ |. + +++.-. + +|++|++. ++. +..
T Consensus 40 ~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~~ 115 (355)
T 3amr_A 40 NSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQS 115 (355)
T ss_dssp GCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EEE
T ss_pred ccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-eee
Confidence 345666667778999999 7999888864 45666665553 22 2 334433 4 89999774 343 222
Q ss_pred E-----e--ccCCceeEEEe---c-CCC-EEEEeeCCCeEEEEecc
Q 006939 70 V-----D--VGWSRLSDLNV---H-EGK-LLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 70 ~-----~--~~~s~v~~l~~---~-dg~-lL~sg~~Dg~V~vWdv~ 103 (625)
+ . ........+++ + .++ +++....++.+..|++.
T Consensus 116 i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~ 161 (355)
T 3amr_A 116 MTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELK 161 (355)
T ss_dssp CSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEE
T ss_pred ccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEE
Confidence 2 1 11122333443 2 343 57777888999888875
No 310
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=41.23 E-value=73 Score=36.07 Aligned_cols=68 Identities=10% Similarity=-0.050 Sum_probs=39.2
Q ss_pred CeEEEEEcCCCCEEE-EEeCC-cEEEEeCCCCeeEEEEe--ccCCceeEEEecCCCEEEEeeCCCeEEEEec
Q 006939 35 GVRCLTFNPDGRTLL-CGLHE-SLKVFSWEPIRCHDAVD--VGWSRLSDLNVHEGKLLGCSYNQSCVGVWVV 102 (625)
Q Consensus 35 ~V~sv~fsPdg~~Lv-Sgs~D-sIrVWdl~sg~~i~t~~--~~~s~v~~l~~~dg~lL~sg~~Dg~V~vWdv 102 (625)
....|+|+|++..|+ +-... .|.++++........+. ..+.....+.+..+.++++.+..+.|..++.
T Consensus 541 ~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~~lywtd~~~~~V~~~d~ 612 (699)
T 1n7d_A 541 WPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANR 612 (699)
T ss_dssp SCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETTEEEEECSTTTCEEEEET
T ss_pred CccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECCEEEEEeCCCCeEEEEEc
Confidence 456789998765544 43334 79999987533322222 1233333444444556666666677777764
No 311
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=40.36 E-value=1.5e+02 Score=28.93 Aligned_cols=100 Identities=15% Similarity=0.111 Sum_probs=52.2
Q ss_pred CCCEEEEEeCC-----CeEEEEECCCCeEEEE--eCCCCCCeEEEEEcCCCCEEEEEeC------CcEEEEeCCCCeeEE
Q 006939 2 SGYFHFSGSAD-----RTVKFWDLETFELIGS--AGPETSGVRCLTFNPDGRTLLCGLH------ESLKVFSWEPIRCHD 68 (625)
Q Consensus 2 dG~lLASGS~D-----~tVkIWDL~tg~~i~t--l~~h~~~V~sv~fsPdg~~LvSgs~------DsIrVWdl~sg~~i~ 68 (625)
++++++.|+.+ ..+.+||+.+.+-... +........++.+ ++.+++.|+. +.+.+||+.+.+...
T Consensus 168 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~ 245 (308)
T 1zgk_A 168 NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETETWTF 245 (308)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEE
T ss_pred CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCcEEE
Confidence 35666677654 3578889887654322 1111112223333 5666666654 258899988766543
Q ss_pred EEeccCCc-eeEEEecCCCEEEEeeCC-----CeEEEEecc
Q 006939 69 AVDVGWSR-LSDLNVHEGKLLGCSYNQ-----SCVGVWVVD 103 (625)
Q Consensus 69 t~~~~~s~-v~~l~~~dg~lL~sg~~D-----g~V~vWdv~ 103 (625)
.-...... ...+...++++++.|+.+ ..+.+||+.
T Consensus 246 ~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~ 286 (308)
T 1zgk_A 246 VAPMKHRRSALGITVHQGRIYVLGGYDGHTFLDSVECYDPD 286 (308)
T ss_dssp CCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETT
T ss_pred CCCCCCCccceEEEEECCEEEEEcCcCCCcccceEEEEcCC
Confidence 22211111 112222467777777654 345666654
No 312
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=39.07 E-value=1.2e+02 Score=29.50 Aligned_cols=100 Identities=14% Similarity=0.062 Sum_probs=51.8
Q ss_pred CCCEEEEEeCC-----CeEEEEECCCCeEEEE--eCCCCCCeEEEEEcCCCCEEEEEeCC------cEEEEeCCCCeeEE
Q 006939 2 SGYFHFSGSAD-----RTVKFWDLETFELIGS--AGPETSGVRCLTFNPDGRTLLCGLHE------SLKVFSWEPIRCHD 68 (625)
Q Consensus 2 dG~lLASGS~D-----~tVkIWDL~tg~~i~t--l~~h~~~V~sv~fsPdg~~LvSgs~D------sIrVWdl~sg~~i~ 68 (625)
++++++.|+.+ ..+.+||+.+.+-... +........++.+ ++.+++.|+.+ .+.+||..+..-..
T Consensus 121 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 198 (308)
T 1zgk_A 121 DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWRM 198 (308)
T ss_dssp TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEE
T ss_pred CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEee
Confidence 45666666543 3577889887654322 2111112222333 56666666542 48888887765433
Q ss_pred EEeccCCc-eeEEEecCCCEEEEeeCC-----CeEEEEecc
Q 006939 69 AVDVGWSR-LSDLNVHEGKLLGCSYNQ-----SCVGVWVVD 103 (625)
Q Consensus 69 t~~~~~s~-v~~l~~~dg~lL~sg~~D-----g~V~vWdv~ 103 (625)
.-...... ...+...++++++.|+.+ ..+.+||+.
T Consensus 199 ~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~ 239 (308)
T 1zgk_A 199 ITAMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVE 239 (308)
T ss_dssp CCCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETT
T ss_pred CCCCCCccccceEEEECCEEEEEeCCCCCCccceEEEEeCC
Confidence 22111111 111222467777777654 357777765
No 313
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=38.63 E-value=3.5e+02 Score=29.38 Aligned_cols=100 Identities=12% Similarity=0.074 Sum_probs=62.7
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeCCcEEEEeCCC-CeeEEEEec----cCC
Q 006939 1 MSGYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFSWEP-IRCHDAVDV----GWS 75 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~DsIrVWdl~s-g~~i~t~~~----~~s 75 (625)
|..+.+|-=. .+++.|+|+++...+..+.- ...|..-.|-.+. .|+--+...|.-|+++. ....+.+.- ...
T Consensus 75 P~~~iiALra-g~~lQiFnle~K~klks~~~-~e~VvfWkWis~~-~l~lVT~taVyHWsi~~~s~P~kvFdR~~~L~~~ 151 (494)
T 1bpo_A 75 PASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLN-TVALVTDNAVYHWSMEGESQPVKMFDRHSSLAGC 151 (494)
T ss_dssp SSSSCEEEEE-TTEEEEEETTTTEEEEEEEC-SSCCCEEEEEETT-EEEEECSSEEEEEESSSSCCCEEEEECCGGGTTC
T ss_pred CCCcEEEEec-CCeEEEEchHHhhhhcceec-CCCceEEEecCCC-eEEEEcCCeeEEecccCCCCchhheecchhcccc
Confidence 4455665554 67899999999988877654 3568888887554 33333445899999864 233444432 234
Q ss_pred ceeEEEe-cCCCEEE-Eee------CCCeEEEEecc
Q 006939 76 RLSDLNV-HEGKLLG-CSY------NQSCVGVWVVD 103 (625)
Q Consensus 76 ~v~~l~~-~dg~lL~-sg~------~Dg~V~vWdv~ 103 (625)
++..+.. ++.++++ +|- -.|.+.+|.++
T Consensus 152 QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~e 187 (494)
T 1bpo_A 152 QIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVD 187 (494)
T ss_dssp EEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEEST
T ss_pred eEEEEEECCCCCeEEEEeecccCCcccceEEEeecc
Confidence 4555555 5677663 332 23577888877
No 314
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=38.10 E-value=49 Score=37.48 Aligned_cols=101 Identities=12% Similarity=0.038 Sum_probs=53.8
Q ss_pred CCEEEEEeCCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeC---CcEEEEeCCCCeeEEEEeccCCceeE
Q 006939 3 GYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLH---ESLKVFSWEPIRCHDAVDVGWSRLSD 79 (625)
Q Consensus 3 G~lLASGS~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~---DsIrVWdl~sg~~i~t~~~~~s~v~~ 79 (625)
+.++++-...+.|.++++........+.........|++.|.+.+|+-+.. ..|.++++........+.........
T Consensus 465 g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnG 544 (699)
T 1n7d_A 465 SNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNG 544 (699)
T ss_dssp SBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCC
T ss_pred CcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccE
Confidence 444555455667888887644433333322345678889986554443322 26777666532221111122233345
Q ss_pred EEe-c-CCCEEEEeeCCCeEEEEecc
Q 006939 80 LNV-H-EGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 80 l~~-~-dg~lL~sg~~Dg~V~vWdv~ 103 (625)
|++ + .++++++-...+.|.+++++
T Consensus 545 lavd~~~~~LY~aD~~~~~I~~~d~d 570 (699)
T 1n7d_A 545 ITLDLLSGRLYWVDSKLHSISSIDVN 570 (699)
T ss_dssp EEECTTTCCEEEEETTTTEEEEECSS
T ss_pred EEEeccCCEEEEEecCCCeEEEEccC
Confidence 565 3 45566666666677777765
No 315
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=37.97 E-value=2.9e+02 Score=33.26 Aligned_cols=98 Identities=13% Similarity=0.175 Sum_probs=61.2
Q ss_pred CEEEEEeCCCeEEEEECCCCeEEE--EeCCCCCCeEEEEEcCC------CCEEEEEeC-C-cEEEEeCCCCeeEEEEecc
Q 006939 4 YFHFSGSADRTVKFWDLETFELIG--SAGPETSGVRCLTFNPD------GRTLLCGLH-E-SLKVFSWEPIRCHDAVDVG 73 (625)
Q Consensus 4 ~lLASGS~D~tVkIWDL~tg~~i~--tl~~h~~~V~sv~fsPd------g~~LvSgs~-D-sIrVWdl~sg~~i~t~~~~ 73 (625)
.+++.++ .+.+.++.+..+++.. ... -...|.|+++.|. +.+++.|.+ | +++|+++.+.+.+......
T Consensus 524 ~~vvva~-g~~l~~fel~~~~L~~~~~~~-l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~ 601 (1158)
T 3ei3_A 524 SQVVVAV-GRALYYLQIHPQELRQISHTE-MEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLG 601 (1158)
T ss_dssp SEEEEEE-TTEEEEEEEETTEEEEEEEEE-CSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECC
T ss_pred CEEEEEE-CCEEEEEEeeCCceeeecccC-CCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECC
Confidence 3444444 4667777766554322 111 2357999998764 368888987 7 9999999876655443332
Q ss_pred C-CceeEEEe---cCCCEEEEeeCCCeEEEEecc
Q 006939 74 W-SRLSDLNV---HEGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 74 ~-s~v~~l~~---~dg~lL~sg~~Dg~V~vWdv~ 103 (625)
. ....++.+ ....+|.+|..||.+.-+.++
T Consensus 602 ~~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~d 635 (1158)
T 3ei3_A 602 GEIIPRSILMTTFESSHYLLCALGDGALFYFGLN 635 (1158)
T ss_dssp SSCCEEEEEEEEETTEEEEEEEETTSEEEEEEEC
T ss_pred CCCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEEc
Confidence 1 22333333 344578899999988777766
No 316
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=37.80 E-value=1.5e+02 Score=28.98 Aligned_cols=100 Identities=12% Similarity=0.127 Sum_probs=50.3
Q ss_pred CCCEEEEEeCC-------CeEEEEECCCCeEEEE--eCCCCCCeEEEEEcCCCCEEEEEeC-------CcEEEEeCCCCe
Q 006939 2 SGYFHFSGSAD-------RTVKFWDLETFELIGS--AGPETSGVRCLTFNPDGRTLLCGLH-------ESLKVFSWEPIR 65 (625)
Q Consensus 2 dG~lLASGS~D-------~tVkIWDL~tg~~i~t--l~~h~~~V~sv~fsPdg~~LvSgs~-------DsIrVWdl~sg~ 65 (625)
++++++.|+.+ ..+.+||+.+.+-... +........++. -++.+++.|+. +.+.+||..+..
T Consensus 109 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~ 186 (318)
T 2woz_A 109 DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVIS--HNGMIYCLGGKTDDKKCTNRVFIYNPKKGD 186 (318)
T ss_dssp TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEE--ETTEEEEECCEESSSCBCCCEEEEETTTTE
T ss_pred CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEE--ECCEEEEEcCCCCCCCccceEEEEcCCCCE
Confidence 45667777654 2467788887654322 111111112222 36666666653 148889988766
Q ss_pred eEEEEeccCCc-eeEEEecCCCEEEEeeCCC-----eEEEEecc
Q 006939 66 CHDAVDVGWSR-LSDLNVHEGKLLGCSYNQS-----CVGVWVVD 103 (625)
Q Consensus 66 ~i~t~~~~~s~-v~~l~~~dg~lL~sg~~Dg-----~V~vWdv~ 103 (625)
-...-...... ...+...++++++.|+.++ .+.+||+.
T Consensus 187 W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~ 230 (318)
T 2woz_A 187 WKDLAPMKTPRSMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLK 230 (318)
T ss_dssp EEEECCCSSCCBSCEEEEETTEEEEEEEEETTEEEEEEEEEETT
T ss_pred EEECCCCCCCcccceEEEECCEEEEEcCcCCCCccceEEEEECC
Confidence 54332211111 1122234677777776432 35556654
No 317
>1l9l_A Granulysin; saposin fold, membrane-lytic, antimicrobial protein; HET: MPO; 0.92A {Homo sapiens} SCOP: a.64.1.1
Probab=37.41 E-value=26 Score=28.11 Aligned_cols=46 Identities=15% Similarity=0.296 Sum_probs=36.7
Q ss_pred hhHHhhHHHHHHhhccCCchhHHHHHHH------------HHHHHHHHHHHHHHhhcc
Q 006939 524 DICSCLLPLLTGLLESDMDRHLSISLDI------------LLKLVRTFGSMIYSAISA 569 (625)
Q Consensus 524 d~c~~lLP~i~~LL~Sk~E~~v~~al~~------------l~~i~~~F~~~I~~~~~~ 569 (625)
++|-.++-.++++|+.+.|..|.-+|+- -..+++.|++.|-+.+.+
T Consensus 5 ~~C~~~v~~le~~l~n~Te~~I~~~L~~vC~~l~~~~~~~C~~~V~~y~~~Ii~~L~~ 62 (74)
T 1l9l_A 5 RTCLTIVQKLKKMVDKPTQRSVSNAATRVCRTGRSRWRDVCRNFMRRYQSRVIQGLVA 62 (74)
T ss_dssp HHHHHHHHHHHHHCSSCCHHHHHHHHHHGGGSSCHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHhcccCHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHh
Confidence 6799999999999965788888877753 356888999988887754
No 318
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=35.25 E-value=3.9e+02 Score=29.62 Aligned_cols=101 Identities=13% Similarity=0.109 Sum_probs=61.5
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCeEEEEeC-CCCCCeEEEEEcCCCCEEE-EEeCC-cEEEEeCCCCeeEEEEeccCCce
Q 006939 1 MSGYFHFSGSADRTVKFWDLETFELIGSAG-PETSGVRCLTFNPDGRTLL-CGLHE-SLKVFSWEPIRCHDAVDVGWSRL 77 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~tg~~i~tl~-~h~~~V~sv~fsPdg~~Lv-Sgs~D-sIrVWdl~sg~~i~t~~~~~s~v 77 (625)
|...+|++ ....|+..|+.+......+. .....+..|+|++.+..++ +-..+ .|..+++........+..+....
T Consensus 5 p~~~Ll~s--~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P 82 (628)
T 4a0p_A 5 PEAFLLFS--RRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYP 82 (628)
T ss_dssp CCCEEEEE--ETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCC
T ss_pred CCcEEEEE--eCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCc
Confidence 44455555 45678989998765433322 1235678999999665555 44444 78888887654444444343445
Q ss_pred eEEEe--cCCCEEEEeeCCCeEEEEecc
Q 006939 78 SDLNV--HEGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 78 ~~l~~--~dg~lL~sg~~Dg~V~vWdv~ 103 (625)
..+++ ..+++..+-...+.|.+.+++
T Consensus 83 ~GlAvD~~~~~LY~tD~~~~~I~v~~~d 110 (628)
T 4a0p_A 83 EGMAVDWLGKNLYWADTGTNRIEVSKLD 110 (628)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred ceEEEEeCCCEEEEEECCCCEEEEEecC
Confidence 55665 245566666666777777766
No 319
>3vmx_A Voltage-gated hydrogen channel 1; coiled-coil, ION channel, ION transport, membrane protein; 1.45A {Mus musculus}
Probab=34.88 E-value=61 Score=23.98 Aligned_cols=42 Identities=21% Similarity=0.223 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhhhCCchhHHHHHHHHHhhh
Q 006939 579 AEQRIERCNRCFIELEKVKCCLPTLMRRGGSVAKSAQELNLALQD 623 (625)
Q Consensus 579 ~EeR~~kc~~c~~~L~~i~~~l~~l~~~~g~~g~~a~el~~~l~~ 623 (625)
+|+|+.|-+..+.+| ...+..|...+++.-+...-|+.+|.+
T Consensus 2 aeq~l~kLKe~n~~L---~~kv~~Le~~c~~~eQEieRL~~LLkq 43 (48)
T 3vmx_A 2 SERQILRLKQINIQL---ATKIQHLEFSCSEKEQEIERLNKLLKQ 43 (48)
T ss_dssp HHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHH---HHHHHHHHHHccHHHHHHHHHHHHHHH
Confidence 689999999999988 444666777777777777778888765
No 320
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=34.80 E-value=2.8e+02 Score=29.35 Aligned_cols=44 Identities=14% Similarity=0.165 Sum_probs=29.1
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCeE--EEEeCC------CCCCeEEEEEcCC
Q 006939 1 MSGYFHFSGSADRTVKFWDLETFEL--IGSAGP------ETSGVRCLTFNPD 44 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~tg~~--i~tl~~------h~~~V~sv~fsPd 44 (625)
|||.++++-...+.|.+++..++.. +..+.. -..+...|+|+|+
T Consensus 36 pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pd 87 (454)
T 1cru_A 36 PDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPD 87 (454)
T ss_dssp TTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTT
T ss_pred CCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCC
Confidence 6899888765545788887655543 333321 2356789999995
No 321
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=33.69 E-value=1.9e+02 Score=28.20 Aligned_cols=91 Identities=13% Similarity=0.105 Sum_probs=45.5
Q ss_pred CCCEEEEEeC------CCeEEEEECCCCeEEEE--eCCCCCCeEEEEEcCCCCEEEEEeCC------cEEEEeCCCCeeE
Q 006939 2 SGYFHFSGSA------DRTVKFWDLETFELIGS--AGPETSGVRCLTFNPDGRTLLCGLHE------SLKVFSWEPIRCH 67 (625)
Q Consensus 2 dG~lLASGS~------D~tVkIWDL~tg~~i~t--l~~h~~~V~sv~fsPdg~~LvSgs~D------sIrVWdl~sg~~i 67 (625)
++++++.|+. -..+.+||+.+.+-... +........++.+ ++.+++.|+.+ .+.+||..+.+..
T Consensus 158 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~ 235 (318)
T 2woz_A 158 NGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIH--KGKIVIAGGVTEDGLSASVEAFDLKTNKWE 235 (318)
T ss_dssp TTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEEETTEEEEEEEEEETTTCCEE
T ss_pred CCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEE--CCEEEEEcCcCCCCccceEEEEECCCCeEE
Confidence 4566666653 23588899987664322 2111111222222 56666666542 4678888776543
Q ss_pred EEEeccCCc-eeEEEecCCCEEEEeeCC
Q 006939 68 DAVDVGWSR-LSDLNVHEGKLLGCSYNQ 94 (625)
Q Consensus 68 ~t~~~~~s~-v~~l~~~dg~lL~sg~~D 94 (625)
..-...... ...+...++++++.|+.+
T Consensus 236 ~~~~~p~~r~~~~~~~~~~~i~v~GG~~ 263 (318)
T 2woz_A 236 VMTEFPQERSSISLVSLAGSLYAIGGFA 263 (318)
T ss_dssp ECCCCSSCCBSCEEEEETTEEEEECCBC
T ss_pred ECCCCCCcccceEEEEECCEEEEECCee
Confidence 322111111 112223467777777654
No 322
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=33.55 E-value=34 Score=41.20 Aligned_cols=28 Identities=21% Similarity=0.103 Sum_probs=25.3
Q ss_pred CCCEEEEEeCCCeEEEEECCCCeEEEEe
Q 006939 2 SGYFHFSGSADRTVKFWDLETFELIGSA 29 (625)
Q Consensus 2 dG~lLASGS~D~tVkIWDL~tg~~i~tl 29 (625)
+..++++-+.|+++|||++.+++|+.+.
T Consensus 248 ~~~~lftL~~D~~LRiWsl~t~~~v~t~ 275 (1139)
T 4fhn_B 248 TYNVLVMLSLDYKLKVLDLSTNQCVETI 275 (1139)
T ss_dssp TTTEEEEEBTTCEEEEEETTTTEEEEEE
T ss_pred CccEEEEEeCCCEEEEEECCCCCeEEee
Confidence 5678999999999999999999998875
No 323
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=33.22 E-value=2.3e+02 Score=28.71 Aligned_cols=62 Identities=11% Similarity=0.106 Sum_probs=36.6
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCe-EEEEeC---CCCCCeEEEEEcCC----CCEEEEEeC--------CcEEEEeCCCC
Q 006939 1 MSGYFHFSGSADRTVKFWDLETFE-LIGSAG---PETSGVRCLTFNPD----GRTLLCGLH--------ESLKVFSWEPI 64 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~tg~-~i~tl~---~h~~~V~sv~fsPd----g~~LvSgs~--------DsIrVWdl~sg 64 (625)
|||.++++- .++.|.++| .+++ .+..+. .-......|+|+|+ +.++++-.. +.|..|+....
T Consensus 38 pdG~l~V~e-~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~ 115 (354)
T 3a9g_A 38 GGGRYLVTE-RPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGS 115 (354)
T ss_dssp ETTEEEEEE-TTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSS
T ss_pred CCCeEEEEe-CCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEECCC
Confidence 578766664 458898887 4454 232221 11356889999998 444444432 34666666543
No 324
>1mhq_A ADP-ribosylation factor binding protein GGA2; super helix, protein transport; 2.20A {Homo sapiens} SCOP: a.118.9.2
Probab=32.70 E-value=62 Score=29.36 Aligned_cols=64 Identities=14% Similarity=0.108 Sum_probs=53.3
Q ss_pred cCCchhHHHHHHHHHhcccccchhhHHhhHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHHHHHhhcc
Q 006939 501 MADHTVLADVMSIVVEKIEIVTLDICSCLLPLLTGLLESDMDRHLSISLDILLKLVRTFGSMIYSAISA 569 (625)
Q Consensus 501 ~~D~~VlvD~L~~l~~~~~~~tLd~c~~lLP~i~~LL~Sk~E~~v~~al~~l~~i~~~F~~~I~~~~~~ 569 (625)
-.|.+...|+-..|+..+ +..-..+-.|.+-|+++...-+..||.+|..++++.|+.++..+..
T Consensus 16 ~~dw~~~leicD~I~~~~-----~~~k~a~rai~krl~~~n~~vql~AL~LLe~~vkNCG~~fh~evas 79 (148)
T 1mhq_A 16 EQDWSAIQNFCEQVNTDP-----NGPTHAPWLLAHKIQSPQEKEALYALTVLEMCMNHCGEKFHSEVAK 79 (148)
T ss_dssp SCCHHHHHHHHHHHHHSS-----HHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHTS
T ss_pred CcCHHHHHHHHHHHHcCC-----ccHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHcCHHHHHHHhh
Confidence 478888888888887774 3577778889999999999999999999999999999988765543
No 325
>1dvp_A HRS, hepatocyte growth factor-regulated tyrosine kinase substrate; VHS, FYVE, zinc finger, superhelix, transferase; HET: CIT; 2.00A {Drosophila melanogaster} SCOP: a.118.9.2 g.50.1.1
Probab=32.39 E-value=68 Score=30.82 Aligned_cols=72 Identities=11% Similarity=0.076 Sum_probs=55.7
Q ss_pred HHHHHHHHHh----cCCchhHHHHHHHHHhcccccchhhHHhhHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHHHHHh
Q 006939 491 VKGAISAMQK----MADHTVLADVMSIVVEKIEIVTLDICSCLLPLLTGLLESDMDRHLSISLDILLKLVRTFGSMIYSA 566 (625)
Q Consensus 491 ik~ai~~~~~----~~D~~VlvD~L~~l~~~~~~~tLd~c~~lLP~i~~LL~Sk~E~~v~~al~~l~~i~~~F~~~I~~~ 566 (625)
+...|+.+.. ..|.+.+.|+-..|+.... ..-+.+-.|.+-|+++...-+.-||.+|..++++-|+.++..
T Consensus 6 ~~~~ie~AT~~~~~~~dw~~~leicd~i~~~~~-----~~k~a~r~l~krl~~~n~~~~l~aL~Lle~~vkNcG~~f~~e 80 (220)
T 1dvp_A 6 FCKNLENATSHLRLEPDWPSILLICDEINQKDV-----TPKNAFAAIKKKMNSPNPHSSCYSLLVLESIVKNCGAPVHEE 80 (220)
T ss_dssp HHHHHHHHHCTTCSSCCHHHHHHHHHHHHTTSS-----CHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSHHHHHHH
T ss_pred HHHHHHHHcCCCCCCcCHHHHHHHHHhhcCCCc-----CHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhccCHHHHHH
Confidence 3444544433 4789988888888877654 556667778888999988888899999999999999988775
Q ss_pred h
Q 006939 567 I 567 (625)
Q Consensus 567 ~ 567 (625)
+
T Consensus 81 v 81 (220)
T 1dvp_A 81 V 81 (220)
T ss_dssp H
T ss_pred H
Confidence 5
No 326
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=31.66 E-value=41 Score=39.74 Aligned_cols=28 Identities=21% Similarity=0.103 Sum_probs=25.2
Q ss_pred CCCEEEEEeCCCeEEEEECCCCeEEEEe
Q 006939 2 SGYFHFSGSADRTVKFWDLETFELIGSA 29 (625)
Q Consensus 2 dG~lLASGS~D~tVkIWDL~tg~~i~tl 29 (625)
+..++++-+.|+++|+|++.+++++.+.
T Consensus 246 ~~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 246 TYNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp TTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred CCcEEEEEECCCEEEEEECCCCCeEeee
Confidence 5678899999999999999999998875
No 327
>2qk2_A LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2, heat repeat, micro plus END, +TIP, protein binding; 2.10A {Drosophila melanogaster}
Probab=31.38 E-value=2.9e+02 Score=25.80 Aligned_cols=42 Identities=17% Similarity=0.131 Sum_probs=32.6
Q ss_pred cchhhHHhhHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHH
Q 006939 521 VTLDICSCLLPLLTGLLESDMDRHLSISLDILLKLVRTFGSM 562 (625)
Q Consensus 521 ~tLd~c~~lLP~i~~LL~Sk~E~~v~~al~~l~~i~~~F~~~ 562 (625)
........++|.+..+|......--..|..+|-.|.+.+|..
T Consensus 169 ~~~~~l~~l~p~l~~~l~D~~~~VR~~A~~~l~~l~~~vg~~ 210 (242)
T 2qk2_A 169 LNKKLLKLLTTSLVKTLNEPDPTVRDSSAEALGTLIKLMGDK 210 (242)
T ss_dssp CCHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHCHH
T ss_pred ccHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHcCHH
Confidence 344555678888888888777777788888888888888874
No 328
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=31.37 E-value=43 Score=38.40 Aligned_cols=30 Identities=23% Similarity=0.414 Sum_probs=25.9
Q ss_pred CCCEEEEEeCCCeEEEEECCCCeEEEEeCC
Q 006939 2 SGYFHFSGSADRTVKFWDLETFELIGSAGP 31 (625)
Q Consensus 2 dG~lLASGS~D~tVkIWDL~tg~~i~tl~~ 31 (625)
++.++++-+.|+++|+|++.+++++.+..-
T Consensus 230 ~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 230 HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 467889999999999999999999877643
No 329
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=31.37 E-value=1.3e+02 Score=29.50 Aligned_cols=59 Identities=20% Similarity=0.225 Sum_probs=39.9
Q ss_pred eEEEEEcCCCCEEEEEeCCcEEEEeCCCCee-------EEEEeccCCceeEEEe-cCCCEEEEeeCCCeE
Q 006939 36 VRCLTFNPDGRTLLCGLHESLKVFSWEPIRC-------HDAVDVGWSRLSDLNV-HEGKLLGCSYNQSCV 97 (625)
Q Consensus 36 V~sv~fsPdg~~LvSgs~DsIrVWdl~sg~~-------i~t~~~~~s~v~~l~~-~dg~lL~sg~~Dg~V 97 (625)
..++.|.|+|.+.++ .++.|.-++-.+..+ ..+-..+|..+..+.+ ++|.+.+.. |+.+
T Consensus 90 F~a~~fD~~G~LYav-~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~l 156 (236)
T 1tl2_A 90 FQFLFFDPNGYLYAV-SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQF 156 (236)
T ss_dssp CSEEEECTTSCEEEE-ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEE
T ss_pred ceEEEECCCCCEEEe-CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcE
Confidence 478999999998887 556665555432211 2223457888888888 788887776 5664
No 330
>3ldz_A STAM-1, signal transducing adapter molecule 1; ubiquitin-binding, cytoplasm, UBL conjugation, endosome, membrane, protein transport, SH3 domain; 2.60A {Homo sapiens} SCOP: a.118.9.0
Probab=29.55 E-value=60 Score=29.06 Aligned_cols=64 Identities=13% Similarity=0.050 Sum_probs=52.6
Q ss_pred hcCCchhHHHHHHHHHhcccccchhhHHhhHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHHHHHhhc
Q 006939 500 KMADHTVLADVMSIVVEKIEIVTLDICSCLLPLLTGLLESDMDRHLSISLDILLKLVRTFGSMIYSAIS 568 (625)
Q Consensus 500 ~~~D~~VlvD~L~~l~~~~~~~tLd~c~~lLP~i~~LL~Sk~E~~v~~al~~l~~i~~~F~~~I~~~~~ 568 (625)
...|.+...|+-.+++.++ +..-+.+-.|.+-|+++...-..-||.+|..++++.|+.++..+.
T Consensus 19 ~~~dw~~ileicD~I~~~~-----~~~k~a~rai~Krl~~~n~~~ql~AL~LLe~~vkNcG~~f~~eva 82 (140)
T 3ldz_A 19 TAEDWGLILDICDKVGQSR-----TGPKDCLRSIMRRVNHKDPHVAMQALTLLGACVSNCGKIFHLEVC 82 (140)
T ss_dssp SSCCHHHHHHHHHHHTTST-----THHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHS
T ss_pred CCcCHHHHHHHHHHHHCCC-----cCHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHhcCHHHHHHHh
Confidence 3478888888888887765 356777888999999998888888999999999999998886553
No 331
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=28.97 E-value=78 Score=37.35 Aligned_cols=39 Identities=15% Similarity=0.293 Sum_probs=33.1
Q ss_pred CeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCeeEEEEecc
Q 006939 35 GVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVDVG 73 (625)
Q Consensus 35 ~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~i~t~~~~ 73 (625)
.+.++...++..++++-+.| ++|||++.++.|+.+.+..
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~dL~ 276 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIELS 276 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEECC
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeeccc
Confidence 46777888888899999999 9999999999998877543
No 332
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=28.72 E-value=3.2e+02 Score=30.58 Aligned_cols=102 Identities=10% Similarity=0.073 Sum_probs=55.5
Q ss_pred CCCEEEEEeCCC--eEEEEECCCCeEEEEeC-----CCCCCeEEEEEcCC-CCEEEEEeC--------CcEEEEeCCCCe
Q 006939 2 SGYFHFSGSADR--TVKFWDLETFELIGSAG-----PETSGVRCLTFNPD-GRTLLCGLH--------ESLKVFSWEPIR 65 (625)
Q Consensus 2 dG~lLASGS~D~--tVkIWDL~tg~~i~tl~-----~h~~~V~sv~fsPd-g~~LvSgs~--------DsIrVWdl~sg~ 65 (625)
+|++++.|+.++ .+.+||+.+..-...-. .......++.+..+ +.+++.|+. +.+.+||+.+..
T Consensus 500 ~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 500 DGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp TSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTC
T ss_pred CCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCc
Confidence 677888887655 68899998766432211 11122233555554 666677765 148888988766
Q ss_pred ------eEEEEe---ccCCceeEEEecCCCEEEEeeCC--------CeEEEEecc
Q 006939 66 ------CHDAVD---VGWSRLSDLNVHEGKLLGCSYNQ--------SCVGVWVVD 103 (625)
Q Consensus 66 ------~i~t~~---~~~s~v~~l~~~dg~lL~sg~~D--------g~V~vWdv~ 103 (625)
...... ..........+.++++++.|+.+ ..|.+||+.
T Consensus 580 w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~ 634 (695)
T 2zwa_A 580 ATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPL 634 (695)
T ss_dssp SSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETT
T ss_pred cccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECC
Confidence 222111 11111112222337777777742 357777765
No 333
>3g2s_A C-terminal fragment of sortilin-related receptor; ADP-ribosylation factor binding protein GGA1, VHS, acidic- cluster dileucine signal, sorla; 1.70A {Homo sapiens} SCOP: a.118.9.2 PDB: 3g2t_A* 3g2u_A 3g2v_A* 3g2w_A 1ujk_A* 1jwf_A 1ujj_A 1jwg_A* 1py1_A*
Probab=28.00 E-value=1.2e+02 Score=27.43 Aligned_cols=63 Identities=13% Similarity=0.133 Sum_probs=52.7
Q ss_pred CCchhHHHHHHHHHhcccccchhhHHhhHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHHHHHhhcc
Q 006939 502 ADHTVLADVMSIVVEKIEIVTLDICSCLLPLLTGLLESDMDRHLSISLDILLKLVRTFGSMIYSAISA 569 (625)
Q Consensus 502 ~D~~VlvD~L~~l~~~~~~~tLd~c~~lLP~i~~LL~Sk~E~~v~~al~~l~~i~~~F~~~I~~~~~~ 569 (625)
.|.+...++-..++.++ +..-..+-.|.+-|+++...-+..||.+|..++++.|+.++..+..
T Consensus 27 ~dw~~ileicD~I~~~~-----~~pk~a~ral~krl~~~n~~v~l~AL~LLe~cvkNCG~~fh~eias 89 (149)
T 3g2s_A 27 LDWASINGFCEQLNEDF-----EGPPLATRLLAHKIQSPQEWEAIQALTVLETCMKSCGKRFHDEVGK 89 (149)
T ss_dssp CCHHHHHHHHHHGGGSS-----SHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHCCHHHHHHHTS
T ss_pred cCHHHHHHHHHHHHCCC-----CcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhcCHHHHHHHhh
Confidence 68888888888887775 3567778889999999998889999999999999999988766543
No 334
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=27.34 E-value=5.2e+02 Score=28.51 Aligned_cols=101 Identities=10% Similarity=0.005 Sum_probs=57.1
Q ss_pred CCEEEEEeCCCeEEEEECCCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeC--C-cEEEEeCCCCeeEEEEeccCCceeE
Q 006939 3 GYFHFSGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLH--E-SLKVFSWEPIRCHDAVDVGWSRLSD 79 (625)
Q Consensus 3 G~lLASGS~D~tVkIWDL~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~--D-sIrVWdl~sg~~i~t~~~~~s~v~~ 79 (625)
+.++.+-...+.|.+.++........+.......+.|++.|.+..++-..+ . .|...++..................
T Consensus 96 ~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P~G 175 (619)
T 3s94_A 96 EKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNG 175 (619)
T ss_dssp TEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSSEEE
T ss_pred CEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCCCcE
Confidence 455666667778888888744332233344556789999997554443333 2 5666666543322222222333455
Q ss_pred EEe-c-CCCEEEEeeCCCeEEEEecc
Q 006939 80 LNV-H-EGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 80 l~~-~-dg~lL~sg~~Dg~V~vWdv~ 103 (625)
+.+ + ++++..+-...+.|..++++
T Consensus 176 lald~~~~~LY~aD~~~~~I~~~~~d 201 (619)
T 3s94_A 176 LTLDYEEQKLYWADAKLNFIHKSNLD 201 (619)
T ss_dssp EEEETTTTEEEEEETTTCCEEEESSS
T ss_pred EEEEccCCEEEEEeCCCCeEEEecCC
Confidence 666 3 45555555555677777766
No 335
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=27.31 E-value=65 Score=36.10 Aligned_cols=70 Identities=11% Similarity=0.156 Sum_probs=47.3
Q ss_pred CCeEEEEEcCCCCEEEEEeC-C-cEEEEeCCC------Cee-------EEEEeccCCceeEEEecCCCEEEEeeCCCeEE
Q 006939 34 SGVRCLTFNPDGRTLLCGLH-E-SLKVFSWEP------IRC-------HDAVDVGWSRLSDLNVHEGKLLGCSYNQSCVG 98 (625)
Q Consensus 34 ~~V~sv~fsPdg~~LvSgs~-D-sIrVWdl~s------g~~-------i~t~~~~~s~v~~l~~~dg~lL~sg~~Dg~V~ 98 (625)
...+.+.++|||++++.++. + ++-|+|++. ++. +....++.+++...+-.+|....+-+-|+.|.
T Consensus 323 ksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G~aYTtlfidSqvv 402 (638)
T 3sbq_A 323 KNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRGNAYTTLFIDSQVV 402 (638)
T ss_dssp SSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSSEEEEEETTTTEEE
T ss_pred CCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCCceEeeeeecceEE
Confidence 34457788999999887665 4 899999873 111 22334555544333326776566777899999
Q ss_pred EEecc
Q 006939 99 VWVVD 103 (625)
Q Consensus 99 vWdv~ 103 (625)
-|+++
T Consensus 403 kWni~ 407 (638)
T 3sbq_A 403 KWNME 407 (638)
T ss_dssp EEEHH
T ss_pred EEecc
Confidence 99998
No 336
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=26.95 E-value=4.3e+02 Score=25.94 Aligned_cols=51 Identities=14% Similarity=0.160 Sum_probs=26.2
Q ss_pred CCCEEEEEeC-C---------CeEEEEECCCCeEEEE--eCCCCCCeEEEEEcCCCCEEEEEeC
Q 006939 2 SGYFHFSGSA-D---------RTVKFWDLETFELIGS--AGPETSGVRCLTFNPDGRTLLCGLH 53 (625)
Q Consensus 2 dG~lLASGS~-D---------~tVkIWDL~tg~~i~t--l~~h~~~V~sv~fsPdg~~LvSgs~ 53 (625)
++++++.|+. + ..+.+||+.+.+-... +.+....-.++.. .++.+++.|+.
T Consensus 65 ~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~-~~~~iyv~GG~ 127 (357)
T 2uvk_A 65 DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFV-HNGKAYVTGGV 127 (357)
T ss_dssp TTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEE-ETTEEEEEECC
T ss_pred CCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCCCcccccceEEE-ECCEEEEEeCc
Confidence 3556666665 2 3578899887664322 2211111122222 46777777764
No 337
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster}
Probab=26.65 E-value=1.2e+02 Score=35.09 Aligned_cols=79 Identities=11% Similarity=0.244 Sum_probs=59.3
Q ss_pred HHHHhhcCCHHHHHHHHHhc-CCchhHHHHHHHHHh---cccccchhhHHhh-HHHHHHhhccCCchhHHHHHHHHHHHH
Q 006939 482 VYRYWERNDVKGAISAMQKM-ADHTVLADVMSIVVE---KIEIVTLDICSCL-LPLLTGLLESDMDRHLSISLDILLKLV 556 (625)
Q Consensus 482 vr~~W~~~dik~ai~~~~~~-~D~~VlvD~L~~l~~---~~~~~tLd~c~~l-LP~i~~LL~Sk~E~~v~~al~~l~~i~ 556 (625)
...+|+++.+. .|..+.+- +|..+++-.+.+|.+ +..-|++-+...+ .|.+-.+|.|++|.++..+|..|..|+
T Consensus 42 a~~i~~~~~~~-~~~~l~~~~~~~~~~~~~~r~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (810)
T 3now_A 42 AELLYKDHCIA-KVASLTKVEKDQDIYVNMVHLVAALCENSVERTKGVLTELGVPWFMRVLDQKHENCVSTAQFCLQTIL 120 (810)
T ss_dssp HHHHHHTTHHH-HHHHHHHHCCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHSCHHHHHHHHHCCSTTHHHHHHHHHHHHH
T ss_pred hHHHHhCchHH-HHHHHHhccCchhHHHHHHHHHHHHHhccHHHHHHHHHHcCHHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 57899999875 55555555 788888888877632 3335555433322 488999999999999999999999999
Q ss_pred HHHHH
Q 006939 557 RTFGS 561 (625)
Q Consensus 557 ~~F~~ 561 (625)
+.+..
T Consensus 121 ~~~~~ 125 (810)
T 3now_A 121 NALSG 125 (810)
T ss_dssp HHHHT
T ss_pred HHHhc
Confidence 88864
No 338
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=25.45 E-value=3.5e+02 Score=27.86 Aligned_cols=59 Identities=12% Similarity=0.190 Sum_probs=35.2
Q ss_pred CCeEEEEEcCCCCEEEEEeC-C-cEEEEeCCC-Cee--EEEEeccCCceeEEEe-c-CCCEEEEeeC
Q 006939 34 SGVRCLTFNPDGRTLLCGLH-E-SLKVFSWEP-IRC--HDAVDVGWSRLSDLNV-H-EGKLLGCSYN 93 (625)
Q Consensus 34 ~~V~sv~fsPdg~~LvSgs~-D-sIrVWdl~s-g~~--i~t~~~~~s~v~~l~~-~-dg~lL~sg~~ 93 (625)
.....++|+||+++++.+.. . .|..|++.. +.. .+.+... .....+.+ . +|.+++++..
T Consensus 221 ~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~~~-g~PDGi~vD~e~G~lwva~~~ 286 (355)
T 3sre_A 221 DFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLSFD-TLVDNISVDPVTGDLWVGCHP 286 (355)
T ss_dssp SSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEECS-SEEEEEEECTTTCCEEEEEES
T ss_pred cccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEeCC-CCCceEEEeCCCCcEEEEecC
Confidence 44678999999988776654 3 799999863 332 2233222 23344555 3 3666654443
No 339
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=25.39 E-value=4.9e+02 Score=25.56 Aligned_cols=94 Identities=13% Similarity=0.106 Sum_probs=48.6
Q ss_pred CCCCEEEEEeCCCeEEEEEC--CCCeEEEEeCCCCCCeEEEEEcCCCCEEEEEeCCcEEEEeCCCCeeEEEEecc----C
Q 006939 1 MSGYFHFSGSADRTVKFWDL--ETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFSWEPIRCHDAVDVG----W 74 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL--~tg~~i~tl~~h~~~V~sv~fsPdg~~LvSgs~DsIrVWdl~sg~~i~t~~~~----~ 74 (625)
|++.+++.+......+-+|- .+.+.+. ......+..+.+.+++.+++.+..+.+.+++...+..-..+... .
T Consensus 172 ~~~~~~~~g~~G~~~~S~d~gG~tW~~~~--~~~~~~~~~~~~~~~g~~~~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~ 249 (327)
T 2xbg_A 172 PSGEYVAVSSRGSFYSTWEPGQTAWEPHN--RTTSRRLHNMGFTPDGRLWMIVNGGKIAFSDPDNSENWGELLSPLRRNS 249 (327)
T ss_dssp TTSCEEEEETTSSEEEEECTTCSSCEEEE--CCSSSCEEEEEECTTSCEEEEETTTEEEEEETTEEEEECCCBCTTSSCC
T ss_pred CCCcEEEEECCCcEEEEeCCCCCceeECC--CCCCCccceeEECCCCCEEEEeCCceEEEecCCCCCeeEeccCCcccCC
Confidence 35666666544433344442 3444442 23446788999999998776655446666532223222111111 1
Q ss_pred CceeEEEe-cCCCEEEEeeCCCeE
Q 006939 75 SRLSDLNV-HEGKLLGCSYNQSCV 97 (625)
Q Consensus 75 s~v~~l~~-~dg~lL~sg~~Dg~V 97 (625)
..+..+.+ +++.+++++. ++.|
T Consensus 250 ~~~~~v~~~~~~~~~~~g~-~g~i 272 (327)
T 2xbg_A 250 VGFLDLAYRTPNEVWLAGG-AGAL 272 (327)
T ss_dssp SCEEEEEESSSSCEEEEES-TTCE
T ss_pred cceEEEEecCCCEEEEEeC-CCeE
Confidence 22455655 4566666654 4555
No 340
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=23.67 E-value=4.2e+02 Score=31.87 Aligned_cols=100 Identities=15% Similarity=0.139 Sum_probs=54.0
Q ss_pred CCCEEEEEeCCCeEEEEECCCCeEEEE-eCCCCCCeEEEEEcCCCCEEEEEeCC-cEEEEeC--CCCeeEEEE-eccCCc
Q 006939 2 SGYFHFSGSADRTVKFWDLETFELIGS-AGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSW--EPIRCHDAV-DVGWSR 76 (625)
Q Consensus 2 dG~lLASGS~D~tVkIWDL~tg~~i~t-l~~h~~~V~sv~fsPdg~~LvSgs~D-sIrVWdl--~sg~~i~t~-~~~~s~ 76 (625)
+|+++|+- ..+|++|++...+.+.. ...+ ..|..+.....+.+++.|..- ++.++.+ ..++..... +.....
T Consensus 895 ~g~Lla~i--g~~l~vy~l~~~~~L~~~~~~~-~~i~~~~l~~~~~~I~vgD~~~Sv~~~~y~~~~~~L~~~a~D~~~~~ 971 (1158)
T 3ei3_A 895 NGKLLASI--NSTVRLYEWTTEKELRTECNHY-NNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNW 971 (1158)
T ss_dssp TTEEEEEE--TTEEEEEEECTTSCEEEEEEEC-CCSCEEEEEEETTEEEEEESSBCEEEEEEETTTTEEEEEEECCSCBC
T ss_pred CCEEEEEc--CCEEEEEECCCCceEEEEeecc-ccEEEEEEeccCCEEEEEEhhheEEEEEEEcCCCeEEEEEeeccccc
Confidence 46555554 36899999986654441 1112 123333333356777777654 6655444 444433222 222233
Q ss_pred eeEEEecCCCEEEEeeCCCeEEEEeccC
Q 006939 77 LSDLNVHEGKLLGCSYNQSCVGVWVVDI 104 (625)
Q Consensus 77 v~~l~~~dg~lL~sg~~Dg~V~vWdv~~ 104 (625)
+.++.+-+...++.+..+|.+.++..+.
T Consensus 972 vta~~~ld~~t~l~aD~~gNl~vl~~~~ 999 (1158)
T 3ei3_A 972 MSAVEILDDDNFLGAENAFNLFVCQKDS 999 (1158)
T ss_dssp EEEEEEEETTEEEEEETTSEEEEEEECT
T ss_pred EEEEEEEccCcEEEEcCCCcEEEEecCC
Confidence 4444442334677788889988887663
No 341
>1of9_A Pore-forming peptide ameobapore A; toxin, saplip, amoebapore A; NMR {Entamoeba histolytica} SCOP: a.64.1.4
Probab=22.87 E-value=1.4e+02 Score=23.60 Aligned_cols=47 Identities=17% Similarity=0.207 Sum_probs=34.6
Q ss_pred hhhHHhhHHHHHHhhccCCchhHHHHHHHH------------HHHHHHHHHHHHHhhcc
Q 006939 523 LDICSCLLPLLTGLLESDMDRHLSISLDIL------------LKLVRTFGSMIYSAISA 569 (625)
Q Consensus 523 Ld~c~~lLP~i~~LL~Sk~E~~v~~al~~l------------~~i~~~F~~~I~~~~~~ 569 (625)
=++|..++-.++.+|..+.+..|.-+|+-+ ..+++.|+|.|-+.+..
T Consensus 5 C~~C~~vv~~ve~~l~~nt~~~I~~~l~~~C~~lp~~~~~~C~~~V~~y~~~iI~~l~~ 63 (77)
T 1of9_A 5 CNLCTGLINTLENLLTTKGADKVKDYISSLCNKASGFIATLCTKVLDFGIDKLIQLIED 63 (77)
T ss_dssp HHHHHHHHHHHHHHCSSSCSHHHHHHHHHHHTTCSSTTHHHHHHHHHHCHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHCcHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHh
Confidence 367999999999999888877777776643 45667777766665543
No 342
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=22.32 E-value=6.4e+02 Score=25.75 Aligned_cols=63 Identities=14% Similarity=0.177 Sum_probs=39.5
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCeE--EEEeC----CCCCCeEEEEEcCC----CCEEEEEe--CC-cEEEEeCCC
Q 006939 1 MSGYFHFSGSADRTVKFWDLETFEL--IGSAG----PETSGVRCLTFNPD----GRTLLCGL--HE-SLKVFSWEP 63 (625)
Q Consensus 1 PdG~lLASGS~D~tVkIWDL~tg~~--i~tl~----~h~~~V~sv~fsPd----g~~LvSgs--~D-sIrVWdl~s 63 (625)
|||.+|++--..+.|++++...+.. +..+. .-..+...|+|+|+ +.++++-+ .+ .|.-|.+..
T Consensus 41 pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R~~~~~ 116 (347)
T 3das_A 41 PGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVRMLYDE 116 (347)
T ss_dssp TTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEEEEBCT
T ss_pred CCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEEEEeCC
Confidence 6899888876689999998765553 22221 22467899999996 44444322 23 555555543
No 343
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=22.06 E-value=75 Score=38.16 Aligned_cols=39 Identities=15% Similarity=0.293 Sum_probs=31.9
Q ss_pred CeEEEEEcCCCCEEEEEeCC-cEEEEeCCCCeeEEEEecc
Q 006939 35 GVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVDVG 73 (625)
Q Consensus 35 ~V~sv~fsPdg~~LvSgs~D-sIrVWdl~sg~~i~t~~~~ 73 (625)
.+.+++..++..++++-+.| ++|||++.++.|+.+.+..
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~DL~ 278 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIELS 278 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEECC
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeechh
Confidence 34556667788899999999 9999999999998877643
No 344
>3rru_A TOM1L1 protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, super-helical protein; 3.00A {Homo sapiens}
Probab=21.89 E-value=2.1e+02 Score=26.03 Aligned_cols=63 Identities=14% Similarity=0.184 Sum_probs=48.8
Q ss_pred CCchhHHHHHHHHHhcccccchhhHHhhHHHHHHhhccCCchh-HHHHHHHHHHHHHHHHHHHHHhhcc
Q 006939 502 ADHTVLADVMSIVVEKIEIVTLDICSCLLPLLTGLLESDMDRH-LSISLDILLKLVRTFGSMIYSAISA 569 (625)
Q Consensus 502 ~D~~VlvD~L~~l~~~~~~~tLd~c~~lLP~i~~LL~Sk~E~~-v~~al~~l~~i~~~F~~~I~~~~~~ 569 (625)
.|.+...|+-..|+.+. +..-+.+-.|.+-|++....+ +..||.+|..++++.|..++..+..
T Consensus 32 ~Dw~~ileicD~In~~~-----~~pkeA~ral~KRl~~~~n~~~~l~AL~LLe~cvkNCG~~fh~eias 95 (152)
T 3rru_A 32 EDWGQFMHICDIINTTQ-----DGPKDAVKALKKRISKNYNHKEIQLTLSLIDMCVQNCGPSFQSLIVK 95 (152)
T ss_dssp CCHHHHHHHHHHHHHST-----THHHHHHHHHHHHHTTCCBHHHHHHHHHHHHHHHHHSCHHHHHHHSS
T ss_pred ccHHHHHHHHHHHhCCC-----ccHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHhcCHHHHHHHHh
Confidence 68888888888777764 357777888888888543444 4569999999999999988877754
No 345
>3b2a_A TON_1937, putative uncharacterized protein; heat-repeats, hypothetical, unknown function; 2.20A {Thermococcus onnurineus}
Probab=21.75 E-value=2.8e+02 Score=27.60 Aligned_cols=55 Identities=15% Similarity=0.099 Sum_probs=42.0
Q ss_pred CchhHHHHHHHH----HhcccccchhhHHhhHHHHHHhhccCCchhHHHHHHHHHHHHH
Q 006939 503 DHTVLADVMSIV----VEKIEIVTLDICSCLLPLLTGLLESDMDRHLSISLDILLKLVR 557 (625)
Q Consensus 503 D~~VlvD~L~~l----~~~~~~~tLd~c~~lLP~i~~LL~Sk~E~~v~~al~~l~~i~~ 557 (625)
|.-|..-.|-+| ...++...+...-.+||-|-.++.+++|+-..-|+.+|+.|+.
T Consensus 46 D~~vk~raL~~LeellK~~~~~l~~~~~e~~Ld~iI~llk~~dEkval~A~r~L~~LLe 104 (265)
T 3b2a_A 46 DETTRLRAFVALGEILKRADSDLRMMVLERHLDVFINALSQENEKVTIKALRALGYLVK 104 (265)
T ss_dssp CHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTCCSTTHHHHHHHHHHHHHHHT
T ss_pred chHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHc
Confidence 334444444333 3334678888889999999999999999999999999998874
No 346
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=21.45 E-value=2.1e+02 Score=29.49 Aligned_cols=101 Identities=12% Similarity=-0.032 Sum_probs=59.0
Q ss_pred CCEEEEEeCCCeEEEEECCCCeEEEEeCCC-CCCeEEEEEc--C-CCCEEEEE-eCC-cEEEEeCCCCeeEEEEec----
Q 006939 3 GYFHFSGSADRTVKFWDLETFELIGSAGPE-TSGVRCLTFN--P-DGRTLLCG-LHE-SLKVFSWEPIRCHDAVDV---- 72 (625)
Q Consensus 3 G~lLASGS~D~tVkIWDL~tg~~i~tl~~h-~~~V~sv~fs--P-dg~~LvSg-s~D-sIrVWdl~sg~~i~t~~~---- 72 (625)
+.+++.++.|+.|.-+|..+|+.+..++.. ..++....-. + ++..++.. ..| .|..++..+|.....+..
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv 89 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLV 89 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHH
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccce
Confidence 346788999999999999999998887653 1222211100 1 22333332 345 888888887755443322
Q ss_pred cCCceeEE---Ee------cCCCEEEEeeCCCeEEEEecc
Q 006939 73 GWSRLSDL---NV------HEGKLLGCSYNQSCVGVWVVD 103 (625)
Q Consensus 73 ~~s~v~~l---~~------~dg~lL~sg~~Dg~V~vWdv~ 103 (625)
..+++..- .+ ..+..+..|+.++.+...|..
T Consensus 90 ~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~ 129 (339)
T 2be1_A 90 STSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINML 129 (339)
T ss_dssp TTCSEEEECC----------CCEEEEECEEEEEEEEEETT
T ss_pred eccccccCCCceeecccccccCCEEEEEecCCEEEEEECC
Confidence 11122110 00 145567778888888887776
No 347
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A*
Probab=21.08 E-value=4.1e+02 Score=26.40 Aligned_cols=65 Identities=12% Similarity=0.068 Sum_probs=41.8
Q ss_pred hcCCchhHHHHHHHHHh----cccccchhhHHhhHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHHHH
Q 006939 500 KMADHTVLADVMSIVVE----KIEIVTLDICSCLLPLLTGLLESDMDRHLSISLDILLKLVRTFGSMIY 564 (625)
Q Consensus 500 ~~~D~~VlvD~L~~l~~----~~~~~tLd~c~~lLP~i~~LL~Sk~E~~v~~al~~l~~i~~~F~~~I~ 564 (625)
+-+|..|..+.+..|.. .++....=.=.-++|.+..||.++....+..++.+|..|++.....+.
T Consensus 177 ~~~d~~v~~~A~~aLs~L~~~~~~~~~~vv~~g~i~~Lv~LL~~~d~~v~~~al~aL~~l~~~~~~~~~ 245 (296)
T 1xqr_A 177 QQQVQKLKVKSAFLLQNLLVGHPEHKGTLCSMGMVQQLVALVRTEHSPFHEHVLGALCSLVTDFPQGVR 245 (296)
T ss_dssp HSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHTTHHHHHHHHHTSCCSTHHHHHHHHHHHHHTTCHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHHhCChHHHHHHHHcCCHHHHHHHHcCCChhHHHHHHHHHHHHHhCChhHHH
Confidence 33666777766655521 111111111123568888999999999999999999999988544444
No 348
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=21.01 E-value=4e+02 Score=26.14 Aligned_cols=91 Identities=9% Similarity=-0.020 Sum_probs=44.9
Q ss_pred CCCEEEEEeC-CCeEEEEECCC--CeE--EEEeCCC-CCCeEEEEEcCCCCEEEEEeC-----------CcEEEEeCCCC
Q 006939 2 SGYFHFSGSA-DRTVKFWDLET--FEL--IGSAGPE-TSGVRCLTFNPDGRTLLCGLH-----------ESLKVFSWEPI 64 (625)
Q Consensus 2 dG~lLASGS~-D~tVkIWDL~t--g~~--i~tl~~h-~~~V~sv~fsPdg~~LvSgs~-----------DsIrVWdl~sg 64 (625)
++++++.|+. ...+..||+.+ .+- +..+... .....++.+ ++.+++.|+. +.+.+||..+.
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~ 96 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFI--DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTN 96 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEE--TTEEEEECCEEECTTSCEEECCCEEEEETTTT
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEE--CCEEEEEcCCCCCCCccceeeccEEEEeCCCC
Confidence 4566666654 34678888864 322 2222211 111222223 5666666654 24788888776
Q ss_pred eeEEEEecc-CCce-eEEEecCCCEEEEeeCC
Q 006939 65 RCHDAVDVG-WSRL-SDLNVHEGKLLGCSYNQ 94 (625)
Q Consensus 65 ~~i~t~~~~-~s~v-~~l~~~dg~lL~sg~~D 94 (625)
+-...-... .... ..+...++++++.|+.+
T Consensus 97 ~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~ 128 (357)
T 2uvk_A 97 SWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVN 128 (357)
T ss_dssp EEEECSCCCSSCCSSEEEEEETTEEEEEECCC
T ss_pred cEEECCCCCCcccccceEEEECCEEEEEeCcC
Confidence 544322222 1111 11222577777777754
No 349
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=20.73 E-value=6.3e+02 Score=25.83 Aligned_cols=98 Identities=12% Similarity=0.103 Sum_probs=57.5
Q ss_pred EEEEEeC--CCeEEEEECCCC--e--EEEEeCCC-CCCeEEEEEcCCCCEEEEEeC----------------CcEEEEeC
Q 006939 5 FHFSGSA--DRTVKFWDLETF--E--LIGSAGPE-TSGVRCLTFNPDGRTLLCGLH----------------ESLKVFSW 61 (625)
Q Consensus 5 lLASGS~--D~tVkIWDL~tg--~--~i~tl~~h-~~~V~sv~fsPdg~~LvSgs~----------------DsIrVWdl 61 (625)
+++.-.. +.+|-+|++... . .+..+.+. ......+.+.++|.++++... ..-.||-+
T Consensus 129 L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~ 208 (355)
T 3sre_A 129 LLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYY 208 (355)
T ss_dssp EEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEE
T ss_pred EEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEE
Confidence 4444333 467778776542 2 24445443 245789999999998777541 12345545
Q ss_pred CCCeeEEEEeccCCceeEEEe-cCCCEE-EEeeCCCeEEEEecc
Q 006939 62 EPIRCHDAVDVGWSRLSDLNV-HEGKLL-GCSYNQSCVGVWVVD 103 (625)
Q Consensus 62 ~sg~~i~t~~~~~s~v~~l~~-~dg~lL-~sg~~Dg~V~vWdv~ 103 (625)
..+++.. +..+....+.+++ ++++.| ++-...+.|..|+++
T Consensus 209 d~~~~~~-~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~ 251 (355)
T 3sre_A 209 SPNDVRV-VAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKH 251 (355)
T ss_dssp CTTCCEE-EEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEEC
T ss_pred ECCeEEE-eecCCcccCcceECCCCCEEEEEeCCCCeEEEEEEC
Confidence 4454332 2223344566777 788766 444566788888876
Done!