Your job contains 1 sequence.
>006941
MVLSLKKYLILSLKVFDSKPQKGSRRSASMRDFKVDSTPETDSKFDTTPGTDSKVGSNPE
KDSKGREKPISDWKANENGSILCPSIELGGCGNVLELRCTFDENWVAELLRKAEEIAKAH
NLEDTPESSERVCTCYNPLGEIDMTNSELIKAASREDSTDNYLYNPAAKDIRHGDLKHFQ
WHWAKGEPVIVSNVLENALGLSWDPMVMWRACRQISNTKHRLYLDVKAIDCLDWCEGEVN
IHQFFKGYTDGRFDKESWPQILKLKDWPPSNLFEERLPRHNVEFLGCLPFKEYTHPCAGA
LNIATKLPKKSLKPDMGPKTYIAYGVAQELGRADSVTKLHCDMSDAVNVLTHTTDVKLKP
EHLAKIEKLKQQHKAQDQMEFFGCSQFSDENSHANSSAIPVKNEQCGGKPDDGDGVGVVP
QDSQICDSMLNDPIPVQRAISEEASEAIADLGKSRESGEPSNIPENEFESADGGAVWDIF
RRQDISKLQDYLKKHFREFRHIHCCPVQQVFYLSSEHKAKLKQEYGIEPWTFIQKLGEAV
FVPAGCPHQVRNLKSCIKAALDFVSPENVSQCVRLTEEFRLLPPNHRAKEDKLEVKKMIL
YAVSQAVKDISDPGAANKPRILNQ
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 006941
(624 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2008875 - symbol:AT1G11950 "AT1G11950" species... 841 5.1e-138 2
TAIR|locus:2027109 - symbol:AT1G62310 "AT1G62310" species... 839 7.4e-137 2
TAIR|locus:2125221 - symbol:AT4G00990 "AT4G00990" species... 1282 1.0e-130 1
TAIR|locus:2036014 - symbol:AT1G09060 "AT1G09060" species... 527 9.9e-87 2
TAIR|locus:2141221 - symbol:B160 "AT4G21430" species:3702... 458 1.1e-78 2
UNIPROTKB|E1BFC2 - symbol:KDM3A "Uncharacterized protein"... 322 6.0e-49 3
UNIPROTKB|E2QWU9 - symbol:KDM3A "Uncharacterized protein"... 322 8.5e-48 3
UNIPROTKB|F1SVC8 - symbol:KDM3A "Uncharacterized protein"... 322 3.1e-46 3
UNIPROTKB|F1RH75 - symbol:KDM3B "Uncharacterized protein"... 316 7.6e-46 2
UNIPROTKB|E1BE97 - symbol:LOC100848816 "Uncharacterized p... 316 1.2e-45 2
UNIPROTKB|Q7LBC6 - symbol:KDM3B "Lysine-specific demethyl... 316 1.2e-45 2
MGI|MGI:1923356 - symbol:Kdm3b "KDM3B lysine (K)-specific... 313 1.9e-45 2
UNIPROTKB|F1NJZ2 - symbol:KDM3B "Uncharacterized protein"... 315 2.0e-45 2
UNIPROTKB|Q5ZIX8 - symbol:KDM3A "Lysine-specific demethyl... 326 2.5e-45 2
UNIPROTKB|Q9Y4C1 - symbol:KDM3A "Lysine-specific demethyl... 322 8.9e-45 3
FB|FBgn0037703 - symbol:JHDM2 "JmjC domain-containing his... 305 1.0e-44 2
MGI|MGI:98847 - symbol:Kdm3a "lysine (K)-specific demethy... 320 1.2e-44 3
RGD|708351 - symbol:Kdm3a "lysine (K)-specific demethylas... 317 3.0e-44 3
UNIPROTKB|E1C232 - symbol:KDM3A "Lysine-specific demethyl... 308 2.8e-43 2
MGI|MGI:1918614 - symbol:Jmjd1c "jumonji domain containin... 248 3.5e-35 3
UNIPROTKB|Q15652 - symbol:JMJD1C "Probable JmjC domain-co... 248 1.6e-34 4
RGD|620634 - symbol:Hr "hair growth associated" species:1... 193 5.1e-18 2
MGI|MGI:96223 - symbol:Hr "hairless" species:10090 "Mus m... 189 2.5e-17 3
UNIPROTKB|O43593 - symbol:HR "Protein hairless" species:9... 172 1.3e-16 3
RGD|708458 - symbol:Jmjd1c "jumonji domain containing 1C"... 208 6.2e-16 1
UNIPROTKB|F1MBI2 - symbol:HR "Uncharacterized protein" sp... 171 3.4e-15 4
UNIPROTKB|F1RMB8 - symbol:HR "Uncharacterized protein" sp... 176 6.7e-15 3
UNIPROTKB|F1PFJ6 - symbol:HR "Uncharacterized protein" sp... 168 2.0e-14 3
>TAIR|locus:2008875 [details] [associations]
symbol:AT1G11950 "AT1G11950" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184
SMART:SM00558 EMBL:CP002684 GenomeReviews:CT485782_GR
eggNOG:NOG305537 KO:K15601 EMBL:AB493451 IPI:IPI00542320
RefSeq:NP_172659.3 UniGene:At.42102 ProteinModelPortal:C0SUU8
PRIDE:C0SUU8 EnsemblPlants:AT1G11950.1 GeneID:837747
KEGG:ath:AT1G11950 TAIR:At1g11950 HOGENOM:HOG000243122 OMA:NHCATSI
PhylomeDB:C0SUU8 ProtClustDB:CLSN2914506 Genevestigator:C0SUU8
Uniprot:C0SUU8
Length = 875
Score = 841 (301.1 bits), Expect = 5.1e-138, Sum P(2) = 5.1e-138
Identities = 182/377 (48%), Positives = 237/377 (62%)
Query: 39 PETDSKFDTTPGTDSKVG--SNPEKDSKGREK---PISDWKANENGSILCPSIELGGCGN 93
PE +F+ GT G + P S ++ P W A+ENGSI C ELGGCG+
Sbjct: 360 PECQLQFEYR-GTRYIHGEAAEPSSSSVSEDETKTPSIKWNADENGSIRCAPKELGGCGD 418
Query: 94 -VLELRCTFDENWVAELLRKAEEIAKAHNLEDTPESSERVCTCYNPLGEIDMTNSELIKA 152
VLEL+ W+++L +KAE +++++ P S C C + DM++ + KA
Sbjct: 419 SVLELKRILPVTWMSDLEQKAETFLASYSIK--PPMS--YCRCSS-----DMSSMKR-KA 468
Query: 153 ASREDSTDNYLYNPAAKDI-RHGDLKHFQWHWAKGEPVIVSNVLENALGLSWDPMVMWRA 211
ASR+ S+DNYLY+P + D+ + +L HFQ HW+KGEPVIV N L N GLSW+PMVMWRA
Sbjct: 469 ASRDGSSDNYLYSPDSLDVLKQEELLHFQEHWSKGEPVIVRNALNNTAGLSWEPMVMWRA 528
Query: 212 -CRQISNTKHRLYLDVKAIDCLDWCEGEVNIHQFFKGYTDGRFDKESWPQILKLKDWPPS 270
C + + DVKAIDCL CE ++N FF+GY+ GR + WP++LKLKDWPPS
Sbjct: 529 LCENVDSAISSNMSDVKAIDCLANCEVKINTLCFFEGYSKGRTYENFWPEMLKLKDWPPS 588
Query: 271 NLFEERLPRHNVEFLGCLPFKEYTHPCAGALNIATKLPKKSLKPDMGPKTYIAYGVAQEL 330
+ FE LPRH EF+ LPF+EY+ P +G LNIATKLP+ LKPD+GPKTY+AYG + EL
Sbjct: 589 DKFENLLPRHCDEFISALPFQEYSDPRSGILNIATKLPEGLLKPDLGPKTYVAYGTSDEL 648
Query: 331 GRADSVTKLHCDMSDAVNVLTHTTDVKLKPEHLAKIEKLKQQHKAQDQMEFFGCSQFSDE 390
GR DSVTKLHCDMSDAVN+L HT +V L E + I LKQ+HK Q++ E Q E
Sbjct: 649 GRGDSVTKLHCDMSDAVNILMHTAEVTLSEEQRSAIADLKQKHKQQNEKELQ--EQNGLE 706
Query: 391 NSHANSSAIPVKNEQCG 407
S I V +E G
Sbjct: 707 EEEVVSDEIVVYDETSG 723
Score = 531 (192.0 bits), Expect = 5.1e-138, Sum P(2) = 5.1e-138
Identities = 93/145 (64%), Positives = 121/145 (83%)
Query: 474 GAVWDIFRRQDISKLQDYLKKHFREFRHIHCCPVQQVF--------YLSSEHKAKLKQEY 525
GA+WDIF+R+D+ KL++YL+KH EFRH +C V +V+ +L+ EHK KLK E+
Sbjct: 723 GALWDIFKREDVPKLEEYLRKHCIEFRHTYCSRVTKVYHPIHDQSYFLTVEHKRKLKAEF 782
Query: 526 GIEPWTFIQKLGEAVFVPAGCPHQVRNLKSCIKAALDFVSPENVSQCVRLTEEFRLLPPN 585
GIEPWTF+QKLGEAVF+PAGCPHQVRNLKSC K A+DFVSPEN+ +C+RLT+EFR LP N
Sbjct: 783 GIEPWTFVQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENIDECLRLTDEFRQLPKN 842
Query: 586 HRAKEDKLEVKKMILYAVSQAVKDI 610
H+A+EDKLE+KKM++YAV QA+K++
Sbjct: 843 HKAREDKLEIKKMVIYAVEQALKEV 867
>TAIR|locus:2027109 [details] [associations]
symbol:AT1G62310 "AT1G62310" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA]
InterPro:IPR001841 InterPro:IPR003347 Pfam:PF02373 PROSITE:PS50089
PROSITE:PS51184 SMART:SM00184 SMART:SM00558 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270
eggNOG:NOG305537 KO:K15601 HOGENOM:HOG000243122
ProtClustDB:CLSN2914506 EMBL:AB493515 IPI:IPI00545153
RefSeq:NP_176421.1 UniGene:At.36279 UniGene:At.68585
ProteinModelPortal:C0SV12 SMR:C0SV12 PRIDE:C0SV12
EnsemblPlants:AT1G62310.1 GeneID:842529 KEGG:ath:AT1G62310
TAIR:At1g62310 OMA:LANCEVE PhylomeDB:C0SV12 Genevestigator:C0SV12
Uniprot:C0SV12
Length = 883
Score = 839 (300.4 bits), Expect = 7.4e-137, Sum P(2) = 7.4e-137
Identities = 172/343 (50%), Positives = 224/343 (65%)
Query: 73 WKANENGSILCPSIELGGCGN-VLELRCTFDENWVAELLRKAEEIAKAHNLEDTPESSER 131
W ENGSI C +LGGCG +LELR W+++L KAE ++N+ +P
Sbjct: 416 WSLGENGSITCAPEKLGGCGERMLELRRILPLTWMSDLEHKAETFLSSYNI--SPRMLN- 472
Query: 132 VCTCYNPLGEIDMTNSELIKAASREDSTDNYLYNPAAKDI-RHGDLKHFQWHWAKGEPVI 190
C C + L E ++T K+ASR S+DNYL+ P + + + +L HFQ HWAKGEPVI
Sbjct: 473 -CRC-SSL-ETELTR----KSASRTTSSDNYLFCPESLGVLKEEELLHFQEHWAKGEPVI 525
Query: 191 VSNVLENALGLSWDPMVMWRA-CRQISNTKHRLYLDVKAIDCLDWCEGEVNIHQFFKGYT 249
V N L+N GLSW+PMVMWRA C +++T VKAIDCL CE E+N QFF+GY+
Sbjct: 526 VRNALDNTPGLSWEPMVMWRALCENVNSTSSSEMSQVKAIDCLANCEVEINTRQFFEGYS 585
Query: 250 DGRFDKESWPQILKLKDWPPSNLFEERLPRHNVEFLGCLPFKEYTHPCAGALNIATKLPK 309
GR + WP++LKLKDWPPS+ FE+ LPRH EF+ LPF+EY+ P G LNIATKLP+
Sbjct: 586 KGRTYENFWPEMLKLKDWPPSDKFEDLLPRHCDEFISALPFQEYSDPRTGILNIATKLPE 645
Query: 310 KSLKPDMGPKTYIAYGVAQELGRADSVTKLHCDMSDAVNVLTHTTDVKLKPEHLAKIEKL 369
+KPD+GPKTYIAYG+ ELGR DSVTKLHCDMSDAVN+LTHT +V L E ++ ++ L
Sbjct: 646 GFIKPDLGPKTYIAYGIPDELGRGDSVTKLHCDMSDAVNILTHTAEVTLSQEQISSVKAL 705
Query: 370 KQQHKAQ---DQMEFFGCSQFSDENSHA-NSSAIPV-KNEQCG 407
KQ+HK Q D+ C++ +E N I +NE+ G
Sbjct: 706 KQKHKLQNKVDKQSTEDCNEKEEEEEEELNMPEISSNENEETG 748
Score = 522 (188.8 bits), Expect = 7.4e-137, Sum P(2) = 7.4e-137
Identities = 99/159 (62%), Positives = 120/159 (75%)
Query: 453 KSRESGEPSNIPE---NEFESADGGAVWDIFRRQDISKLQDYLKKHFREFRHIHCCPVQQ 509
K E E N+PE NE E G A+WDIFRR+D+ KL++YL+KH +EFRH +C PV +
Sbjct: 726 KEEEEEEELNMPEISSNENEET-GSALWDIFRREDVPKLEEYLRKHCKEFRHTYCSPVTK 784
Query: 510 VF--------YLSSEHKAKLKQEYGIEPWTFIQKLGEAVFVPAGCPHQVRNLKSCIKAAL 561
V+ YL+ EHK KLK EYGIEPWTF+QKLGEAVF+PAGCPHQVRNLKSC K A+
Sbjct: 785 VYHPIHDQSCYLTLEHKRKLKAEYGIEPWTFVQKLGEAVFIPAGCPHQVRNLKSCTKVAV 844
Query: 562 DFVSPENVSQCVRLTEEFRLLPPNHRAKEDKLEVKKMIL 600
DFVSPEN+ +C+RLTEEFR LP NH+A+EDKLE + L
Sbjct: 845 DFVSPENIHECLRLTEEFRQLPKNHKAREDKLEASLLSL 883
>TAIR|locus:2125221 [details] [associations]
symbol:AT4G00990 "AT4G00990" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA]
InterPro:IPR001841 InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184
SMART:SM00184 SMART:SM00558 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0008270 eggNOG:NOG305537 KO:K15601 HOGENOM:HOG000243122
EMBL:AY072204 EMBL:AY096708 IPI:IPI00545540 RefSeq:NP_192008.3
UniGene:At.3531 ProteinModelPortal:Q8VYB9 PaxDb:Q8VYB9 PRIDE:Q8VYB9
EnsemblPlants:AT4G00990.1 GeneID:827933 KEGG:ath:AT4G00990
TAIR:At4g00990 InParanoid:Q8VYB9 OMA:GYLEGRM PhylomeDB:Q8VYB9
ProtClustDB:CLSN2918567 Genevestigator:Q8VYB9 Uniprot:Q8VYB9
Length = 840
Score = 1282 (456.3 bits), Expect = 1.0e-130, P = 1.0e-130
Identities = 268/596 (44%), Positives = 365/596 (61%)
Query: 40 ETDSKFDTT-PGTDSKVGSNPEKDSKGREKPI--SDWKANENGSILCPSIELGGCG-NVL 95
E D K + G + ++ + KDS P+ S WK N + SI CP E GGCG + L
Sbjct: 247 ERDGKKNAEGKGYECRIPAGQGKDSDAYV-PLHFSTWKLNSDSSIPCPPKECGGCGTSTL 305
Query: 96 ELRCTFDENWVAELLRKAEEIAKAHNLEDTPESSERVCTCYNPLGEIDMTNSELIK--AA 153
ELR + +WV +L+ AE+ N T C+ + TNS+ I+ AA
Sbjct: 306 ELRRLWKRDWVEKLITNAEKCTL--NFRPTDVDIVHECSSCS-------TNSDSIRRQAA 356
Query: 154 SREDSTDNYLYNPAAKDIRHGDLKHFQWHWAKGEPVIVSNVLENALGLSWDPMVMWRACR 213
R+++ DN+LY+P A D+ D+ HFQ+HW K EPVIV NVLE GLSW+PMVMWRACR
Sbjct: 357 FRKNAHDNFLYSPNAVDLAEDDIAHFQFHWMKAEPVIVRNVLEKTSGLSWEPMVMWRACR 416
Query: 214 QISNTKHRLYLD---VKAIDCLDWCEGEVNIHQFFKGYTDGRFDKESWPQILKLKDWPPS 270
++ + + VKA+DCLDWCE E+N+HQFF+GY +GR K WP++LKLKDWPPS
Sbjct: 417 EMDPKRKGTEEETTKVKALDCLDWCEVEINLHQFFEGYLEGRMHKNGWPEMLKLKDWPPS 476
Query: 271 NLFEERLPRHNVEFLGCLPFKEYTHPCAGALNIATKLPKKSLKPDMGPKTYIAYGVAQEL 330
+LFE+RLPRHN EF+ LPF +YT P +G LN+AT+ P+ SLKPD+GPKTYIAYG +EL
Sbjct: 477 DLFEKRLPRHNAEFIAALPFFDYTDPKSGILNLATRFPEGSLKPDLGPKTYIAYGFHEEL 536
Query: 331 GRADSVTKLHCDMSDAVNVLTHTTDVKLKPEHLAKIEKLKQQHKAQ---DQMEFFGCSQF 387
R DSVTKLHCD+SDAVNVLTHT V++ P I K+ Q+ A+ + ++ G +
Sbjct: 537 NRGDSVTKLHCDISDAVNVLTHTAKVEIPPVKYQNI-KVHQKKYAEAMLQKQQYSGQVKE 595
Query: 388 SDENSHANSSAIPVKNEQCGGKPXXXXXX--XXXPQDSQICDSML--NDPIPVQRXXXXX 443
+ E + + + + K P S + ++ + P Q
Sbjct: 596 ASELENKSMKEVDESKKDLKDKAANEEQSNNSSRPSGSGEAEKVIISKEDNPTQPAVSTS 655
Query: 444 XXXXXXD-LGKSRESGEPSNIPENEFESADGGAVWDIFRRQDISKLQDYLKKHFREFRHI 502
L +E+ +N ++ GGAVWDIFRR+D+ KL +LK+H EFRH
Sbjct: 656 VESIQEQKLDAPKETDGNTN---ERSKAVHGGAVWDIFRREDVPKLIQFLKRHEHEFRHF 712
Query: 503 HCCPVQ--------QVFYLSSEHKAKLKQEYGIEPWTFIQKLGEAVFVPAGCPHQVRNLK 554
+ P++ Q +LS K +LK+E+ IEPWTF Q LGEAVF+PAGCPHQVRN +
Sbjct: 713 NNEPLESVIHPIHDQTMFLSDSQKKQLKEEFDIEPWTFEQHLGEAVFIPAGCPHQVRNRQ 772
Query: 555 SCIKAALDFVSPENVSQCVRLTEEFRLLPPNHRAKEDKLEVKKMILYAVSQAVKDI 610
SCIK ALDFV+PE+V +C+RLT+EFR LP +H + EDKLE+KK+ LYA S A++++
Sbjct: 773 SCIKVALDFVAPESVEECLRLTQEFRRLPKDHSSSEDKLELKKIALYAASSAIREV 828
>TAIR|locus:2036014 [details] [associations]
symbol:AT1G09060 "AT1G09060" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA]
InterPro:IPR001841 InterPro:IPR003347 InterPro:IPR014977
Pfam:PF02373 Pfam:PF08879 PROSITE:PS50089 PROSITE:PS51184
SMART:SM00184 SMART:SM00558 EMBL:CP002684 GO:GO:0046872
GO:GO:0008270 InterPro:IPR018866 Pfam:PF10497 KO:K15601
IPI:IPI00656590 RefSeq:NP_001031007.1 UniGene:At.10382
ProteinModelPortal:F4HZD1 PRIDE:F4HZD1 EnsemblPlants:AT1G09060.3
GeneID:837427 KEGG:ath:AT1G09060 OMA:MNWVAKL PhylomeDB:F4HZD1
Uniprot:F4HZD1
Length = 944
Score = 527 (190.6 bits), Expect = 9.9e-87, Sum P(2) = 9.9e-87
Identities = 115/286 (40%), Positives = 163/286 (56%)
Query: 72 DWKANENGSILCPSIELGGCGN-VLELRCTFDENWVAELLRKAEEIAKAHNLEDTPESSE 130
+W+AN +GSI CP E GGCG+ L L F NWVA+L++ AEEI L D
Sbjct: 409 EWEANGDGSIPCPPKEYGGCGSHSLNLARIFKMNWVAKLVKNAEEIVSGCKLSDL----- 463
Query: 131 RVCTCYNPLGEIDMTNSELIKAASREDSTDNYLYNPAAKDIRHGDLKHFQWHWAKGEPVI 190
NP DM +S K A RE+S DNY+Y+P+ + I+ + F+ WA+G V
Sbjct: 464 -----LNP----DMCDSRFCKFAEREESGDNYVYSPSLETIKTDGVAKFEQQWAEGRLVT 514
Query: 191 VSNVLENALGLSWDPMVMWRACRQISNTKHRLYLD-VKAIDCLDWCEGEVNIHQFFKGYT 249
V VL+++ WDP +WR ++S+ K R + +KAI+CLD E +V + +F + Y
Sbjct: 515 VKMVLDDSSCSRWDPETIWRDIDELSDEKLREHDPFLKAINCLDGLEVDVRLGEFTRAYK 574
Query: 250 DGRFDKESWPQILKLKDWPPSNLFEERLPRHNVEFLGCLPFKEYTHPCAGALNIATKLPK 309
DG+ + P + KLKDWP + EE + EF+ PF EY HP G LN+A KLP
Sbjct: 575 DGKNQETGLPLLWKLKDWPSPSASEEFIFYQRPEFIRSFPFLEYIHPRLGLLNVAAKLPH 634
Query: 310 KSLKPDMGPKTYIAYGVAQELGRADSVTKLHCDMSDAVNVLTHTTD 355
SL+ D GPK Y++ G QE+ DS+T +H +M D V +L HT++
Sbjct: 635 YSLQNDSGPKIYVSCGTYQEISAGDSLTGIHYNMRDMVYLLVHTSE 680
Score = 375 (137.1 bits), Expect = 9.9e-87, Sum P(2) = 9.9e-87
Identities = 73/159 (45%), Positives = 106/159 (66%)
Query: 456 ESGEPSNIPENEFESADGGAVWDIFRRQDISKLQDYLKKHFREFRHIHCC----PVQQVF 511
E+G+ N+ + S GGA WD+FRRQD+ KL YL++ F++ +I P+ +
Sbjct: 747 ENGD--NMESSCTSSCAGGAQWDVFRRQDVPKLSGYLQRTFQKPDNIQTDFVSRPLYEGL 804
Query: 512 YLSSEHKAKLKQEYGIEPWTFIQKLGEAVFVPAGCPHQVRNLKSCIKAALDFVSPENVSQ 571
+L+ HK +L+ E+G+EPWTF Q GEA+F+PAGCP Q+ NL+S I+ ALDF+ PE+V +
Sbjct: 805 FLNEHHKRQLRDEFGVEPWTFEQHRGEAIFIPAGCPFQITNLQSNIQVALDFLCPESVGE 864
Query: 572 CVRLTEEFRLLPPNHRAKEDKLEVKKMILYAVSQAVKDI 610
RL EE R LP +H AK LE+ K+ LYA S A+K++
Sbjct: 865 SARLAEEIRCLPNDHEAKLQILEIGKISLYAASSAIKEV 903
Score = 44 (20.5 bits), Expect = 1.5e-31, Sum P(2) = 1.5e-31
Identities = 21/71 (29%), Positives = 34/71 (47%)
Query: 67 EKPISDWKANENGSILCPSIELGGCGNVLELRCTFDENWVAELLRKAEEIA---KAHNLE 123
E+P D K +EN S+L P +L G + +L + E A + + E+A NL
Sbjct: 695 EEP--DQKMSENESLLSPEQKLRD-GELHDL--SLGE---ASMEKNEPELALTVNPENLT 746
Query: 124 DTPESSERVCT 134
+ ++ E CT
Sbjct: 747 ENGDNMESSCT 757
>TAIR|locus:2141221 [details] [associations]
symbol:B160 "AT4G21430" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008150 "biological_process" evidence=ND] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] InterPro:IPR001841 InterPro:IPR003347
InterPro:IPR014977 Pfam:PF02373 Pfam:PF08879 PROSITE:PS50089
PROSITE:PS51184 SMART:SM00184 SMART:SM00558 EMBL:CP002687
GO:GO:0046872 GO:GO:0008270 KO:K15601 EMBL:AY142484 EMBL:AB493691
IPI:IPI00524203 RefSeq:NP_193874.2 UniGene:At.32630
ProteinModelPortal:Q8H1S7 PRIDE:Q8H1S7 EnsemblPlants:AT4G21430.1
GeneID:827895 KEGG:ath:AT4G21430 TAIR:At4g21430 InParanoid:Q8H1S7
OMA:NILPISH PhylomeDB:Q8H1S7 ProtClustDB:CLSN2719050
ArrayExpress:Q8H1S7 Genevestigator:Q8H1S7 Uniprot:Q8H1S7
Length = 927
Score = 458 (166.3 bits), Expect = 1.1e-78, Sum P(2) = 1.1e-78
Identities = 107/323 (33%), Positives = 166/323 (51%)
Query: 54 KVGSNPEKDSKGREKPISDWKANENG---SILCPSIELGGCGNVLELRCTFDENWVAELL 110
++ S+ ++ + + + K + NG +C E+ GC N L L F ++L
Sbjct: 381 RLNSDQDQSQESLSRKVGSVKCS-NGIKSPKVCKRKEVKGCSNNLFLSL-FPLELTSKLE 438
Query: 111 RKAEEIAKAHNLEDTPESSERVCTCYNPLG-EIDMTNSEL-IKAAS--REDSTDNYLYNP 166
AEE+ + L PE ++ C +G E ++S+ +K AS RED T N+LY P
Sbjct: 439 ISAEEVVSCYEL---PEILDKYSGCPFCIGMETQSSSSDSHLKEASKTREDGTGNFLYYP 495
Query: 167 AAKDIRHGDLKHFQWHWAKGEPVIVSNVLENALGLSWDPMVMWRACRQISNTKHRLYLDV 226
D +L+HFQ HW+KG PVIV +V+++ L+WDP+ ++ C + N ++
Sbjct: 496 TVLDFHQNNLEHFQTHWSKGHPVIVRSVIKSGSSLNWDPVALF--CHYLMNRNNKTG--- 550
Query: 227 KAIDCLDWCEGEVNIHQFFKGYTDGRFDKESWPQILKLKDWPPSNLFEERLPRHNVEFLG 286
DC+DW E E+ + QFF G G+ + + + LKL+ W S+LF+E+ P H E L
Sbjct: 551 NTTDCMDWFEVEIGVKQFFLGSLRGKAETNTCQERLKLEGWLSSSLFKEQFPNHYAEILN 610
Query: 287 CLPFKEYTHPCAGALNIATKLPKKSLKPDMGPKTYIAYGVAQELGRADSVTKLHCDMSDA 346
LP Y P G LNIA LP PD GP I+Y +E + DSV KL + D
Sbjct: 611 ILPISHYMDPKRGLLNIAANLPDTVQPPDFGPCLNISYRSGEEYAQPDSVKKLGFETCDM 670
Query: 347 VNVLTHTTDVKLKPEHLAKIEKL 369
V++L + T+ + + +I KL
Sbjct: 671 VDILLYVTETPVSTNQICRIRKL 693
Score = 370 (135.3 bits), Expect = 1.1e-78, Sum P(2) = 1.1e-78
Identities = 74/168 (44%), Positives = 112/168 (66%)
Query: 452 GKSRESGEPSNIPENEFESADGGAVWDIFRRQDISKLQDYLKKHFREFRHIHCC------ 505
G+ RES S E E S GA WD+F++QD+SKL +Y+K H E +
Sbjct: 748 GEERESCNYSC--EEESLSNTYGAQWDVFQKQDVSKLLEYIKNHSLELESMDSSKKKVSH 805
Query: 506 PV-QQVFYLSSEHKAKLKQEYGIEPWTFIQKLGEAVFVPAGCPHQVRNLKSCIKAALDFV 564
P+ +Q +YL HKA+LK+E+ +EPW+F Q +GEAV +PAGCP+Q+R KSC+ A L F+
Sbjct: 806 PLLEQSYYLDEYHKARLKEEFDVEPWSFDQCVGEAVILPAGCPYQIRKNKSCVNAVLKFL 865
Query: 565 SPENVSQCVRLTEEFRLLPPNHRAKEDKLEVKKMILYAVSQAVKDISD 612
SPE+VS+ ++ +E LP + ++K +K+EVKKM ++ +S+AVK+I +
Sbjct: 866 SPEHVSESIKRVKELNQLPQSVKSKANKIEVKKMAIHKISEAVKEIRE 913
>UNIPROTKB|E1BFC2 [details] [associations]
symbol:KDM3A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051573 "negative regulation of histone H3-K9
methylation" evidence=IEA] [GO:0050681 "androgen receptor binding"
evidence=IEA] [GO:0046293 "formaldehyde biosynthetic process"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0036123 "histone
H3-K9 dimethylation" evidence=IEA] [GO:0033169 "histone H3-K9
demethylation" evidence=IEA] [GO:0030521 "androgen receptor
signaling pathway" evidence=IEA] [GO:0009755 "hormone-mediated
signaling pathway" evidence=IEA] [GO:0007290 "spermatid nucleus
elongation" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005506 "iron ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0001047 "core
promoter binding" evidence=IEA] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00558
GO:GO:0005634 GO:GO:0045893 GO:GO:0030521 GO:GO:0005506
GO:GO:0009755 GO:GO:0033169 GeneTree:ENSGT00530000063039 CTD:55818
KO:K15601 GO:GO:0046293 OMA:RRLQFNK EMBL:DAAA02031122
IPI:IPI00709258 RefSeq:NP_001179801.1 UniGene:Bt.52403 PRIDE:E1BFC2
Ensembl:ENSBTAT00000018069 GeneID:536073 KEGG:bta:536073
NextBio:20876880 Uniprot:E1BFC2
Length = 1320
Score = 322 (118.4 bits), Expect = 6.0e-49, Sum P(3) = 6.0e-49
Identities = 69/161 (42%), Positives = 96/161 (59%)
Query: 453 KSRESGEPSNIPENEF-ESADG-GAVWDIFRRQDISKLQDYLKKHFREFRHIHCC---PV 507
K+ + G+ + F E + GA+W I+ +D K++++LKK E + P+
Sbjct: 1147 KTIQDGDSDELTIKRFIEGKEKPGALWHIYAAKDTEKIREFLKKVSEEQGQENPADHDPI 1206
Query: 508 Q-QVFYLSSEHKAKLKQEYGIEPWTFIQKLGEAVFVPAGCPHQVRNLKSCIKAALDFVSP 566
Q +YL + +L QEYG++ W +Q LG+ VF+PAG PHQV NL SCIK A DFVSP
Sbjct: 1207 HDQSWYLDRSLRKRLHQEYGVQGWAIVQFLGDVVFIPAGAPHQVHNLYSCIKVAEDFVSP 1266
Query: 567 ENVSQCVRLTEEFRLLPPNHRAKEDKLEVKKMILYAVSQAV 607
E+V C LT+EFR L H EDKL+VK +I +AV AV
Sbjct: 1267 EHVKHCFWLTQEFRYLSQTHTNHEDKLQVKNVIYHAVKDAV 1307
Score = 247 (92.0 bits), Expect = 6.0e-49, Sum P(3) = 6.0e-49
Identities = 61/178 (34%), Positives = 90/178 (50%)
Query: 179 FQWHWAKGEPVIVSNVLENALGLSWDPMVMWRACRQISNTKHRLYLDVKAIDCL--DWCE 236
F+ W +G+PV+VS V W P +R R+ N +V ++C +
Sbjct: 965 FRECWKQGQPVMVSGVHHKLNTELWKPE-SFR--REFGNQ------EVDLVNCRTNEIIT 1015
Query: 237 GEVNIHQFFKGYTD--GRFDKESWPQILKLKDWPPSNLFEERLPRHNVEFLGCLPFKEYT 294
G + F+ G+ D R E P +LKLKDWPP F + +P + + +P EYT
Sbjct: 1016 G-ATVGDFWDGFEDVPNRLKNEKEPMVLKLKDWPPGEDFRDMMPSRFDDLMANIPLPEYT 1074
Query: 295 HPCAGALNIATKLPKKSLKPDMGPKTYIAYGVAQELGRADSVTKLHCDMSDAVNVLTH 352
G LN+A++LP ++PD+GPK Y AYG+ R T LH D+SDA NV+ +
Sbjct: 1075 RR-DGKLNLASRLPNYFVRPDLGPKMYNAYGLITPEDRKYGTTNLHLDVSDAANVMVY 1131
Score = 72 (30.4 bits), Expect = 6.0e-49, Sum P(3) = 6.0e-49
Identities = 43/190 (22%), Positives = 77/190 (40%)
Query: 26 RSASMRDFKVDSTPETDSKFDTTPGTDSKVGSNPE-KDSKGREKPISDW-KANENGSILC 83
++AS+ + ++ +TPE F+ P T + PE K + P S K E ++ C
Sbjct: 419 KAASVAELEITNTPELQKHFEHAPSTSDVLSKKPEEKAAVNSNSPDSCIEKRGEPSTLGC 478
Query: 84 PSIELGGCGNVL--ELRCTFDENWVAEL-LRKA--EEIAKAHNLEDTPESSERVCTCYNP 138
S + + E CT N RK+ + AK L+ + E+ + +C N
Sbjct: 479 QSQNIKSSSAKVDPESCCTRSNNKFQNAPSRKSVLTDPAKLKKLQQSGEAFVQDDSCVNI 538
Query: 139 LGEIDMTNSELIKAASREDSTDNYLYNPAAKDIRHGDLKHFQWHWA-KGEPVIVSNVLEN 197
+ ++ E + R+D + +P H F H + E + N ++
Sbjct: 539 VAQLPKCR-ECRLDSLRKDK-EQQKDSPVFCRFFHFRRLQFNKHGVLRVEGFLTPNKYDS 596
Query: 198 -ALGLSWDPM 206
A+GL W P+
Sbjct: 597 EAIGL-WLPL 605
>UNIPROTKB|E2QWU9 [details] [associations]
symbol:KDM3A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051573 "negative regulation of histone H3-K9
methylation" evidence=IEA] [GO:0050681 "androgen receptor binding"
evidence=IEA] [GO:0046293 "formaldehyde biosynthetic process"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0036123 "histone
H3-K9 dimethylation" evidence=IEA] [GO:0033169 "histone H3-K9
demethylation" evidence=IEA] [GO:0030521 "androgen receptor
signaling pathway" evidence=IEA] [GO:0009755 "hormone-mediated
signaling pathway" evidence=IEA] [GO:0007290 "spermatid nucleus
elongation" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005506 "iron ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0001047 "core
promoter binding" evidence=IEA] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00558
GO:GO:0005634 GO:GO:0045893 GO:GO:0030521 GO:GO:0005506
GO:GO:0009755 GO:GO:0033169 GeneTree:ENSGT00530000063039 CTD:55818
KO:K15601 GO:GO:0046293 OMA:RRLQFNK EMBL:AAEX03010929
RefSeq:XP_532973.3 Ensembl:ENSCAFT00000012063 GeneID:475763
KEGG:cfa:475763 NextBio:20851540 Uniprot:E2QWU9
Length = 1322
Score = 322 (118.4 bits), Expect = 8.5e-48, Sum P(3) = 8.5e-48
Identities = 69/161 (42%), Positives = 96/161 (59%)
Query: 453 KSRESGEPSNIPENEF-ESADG-GAVWDIFRRQDISKLQDYLKKHFREFRHIHCC---PV 507
K+ + G+ + F E + GA+W I+ +D K++++LKK E + P+
Sbjct: 1149 KTIQDGDSDELTIKRFIEGKEKPGALWHIYAAKDTEKIREFLKKVSEEQGQENPADHDPI 1208
Query: 508 Q-QVFYLSSEHKAKLKQEYGIEPWTFIQKLGEAVFVPAGCPHQVRNLKSCIKAALDFVSP 566
Q +YL + +L QEYG++ W +Q LG+ VF+PAG PHQV NL SCIK A DFVSP
Sbjct: 1209 HDQSWYLDRSLRKRLHQEYGVQGWAIVQFLGDVVFIPAGAPHQVHNLYSCIKVAEDFVSP 1268
Query: 567 ENVSQCVRLTEEFRLLPPNHRAKEDKLEVKKMILYAVSQAV 607
E+V C LT+EFR L H EDKL+VK +I +AV AV
Sbjct: 1269 EHVKHCFWLTQEFRYLSQTHTNHEDKLQVKNVIYHAVKDAV 1309
Score = 243 (90.6 bits), Expect = 8.5e-48, Sum P(3) = 8.5e-48
Identities = 60/178 (33%), Positives = 90/178 (50%)
Query: 179 FQWHWAKGEPVIVSNVLENALGLSWDPMVMWRACRQISNTKHRLYLDVKAIDCL--DWCE 236
F+ W +G+PV+VS V W P +R ++ N +V ++C +
Sbjct: 967 FRECWKQGQPVMVSGVHHKLNTDLWKPE-SFR--KEFGNQ------EVDLVNCRTNEIIT 1017
Query: 237 GEVNIHQFFKGYTD--GRFDKESWPQILKLKDWPPSNLFEERLPRHNVEFLGCLPFKEYT 294
G + F+ G+ D R E P +LKLKDWPP F + +P + + +P EYT
Sbjct: 1018 G-ATVGDFWDGFEDVPNRLKNEKEPMVLKLKDWPPGEDFRDMMPSRFDDLMANIPLPEYT 1076
Query: 295 HPCAGALNIATKLPKKSLKPDMGPKTYIAYGVAQELGRADSVTKLHCDMSDAVNVLTH 352
G LN+A++LP ++PD+GPK Y AYG+ R T LH D+SDA NV+ +
Sbjct: 1077 RR-DGKLNLASRLPNYFVRPDLGPKMYNAYGLITPEDRKYGTTNLHLDVSDAANVMVY 1133
Score = 65 (27.9 bits), Expect = 8.5e-48, Sum P(3) = 8.5e-48
Identities = 45/196 (22%), Positives = 77/196 (39%)
Query: 20 PQKGSRRSASMRDFKVDSTPETDSKFDTTPGTDSKVGSNPE-KDSKGREKPISDW-KANE 77
P++G S + ++ STPE + P T + + PE K P S K E
Sbjct: 415 PKEGVPTKPSTAEVEIASTPELQKHLEYAPSTSDVLSNKPEEKAGVVSNSPNSCVEKKIE 474
Query: 78 NGSILCPSIELGGCGNVL--ELRCTFDENWVAEL-LRKA--EEIAKAHNLEDTPESSERV 132
++ C S L + E CT N + RK+ + AK L+ + E+ +
Sbjct: 475 TSTLGCRSQTLKESSVKIDNESCCTRSNNKIQNAPSRKSVLTDPAKLKKLQQSGEAFVQD 534
Query: 133 CTCYNPLGEIDMTNSELIKAASREDSTDNYLYNPAAKDIRHGDLKHFQWHWA-KGEPVIV 191
+C N + ++ E + R+D + +P H F H + E +
Sbjct: 535 DSCVNIVAQLPKCR-ECRLDSLRKDK-EQQKDSPVFCRFFHFRRLQFNKHGVLRVEGFLT 592
Query: 192 SNVLEN-ALGLSWDPM 206
N ++ A+GL W P+
Sbjct: 593 PNKYDSEAIGL-WLPL 607
>UNIPROTKB|F1SVC8 [details] [associations]
symbol:KDM3A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051573 "negative regulation of histone H3-K9
methylation" evidence=IEA] [GO:0050681 "androgen receptor binding"
evidence=IEA] [GO:0046293 "formaldehyde biosynthetic process"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0036123 "histone
H3-K9 dimethylation" evidence=IEA] [GO:0033169 "histone H3-K9
demethylation" evidence=IEA] [GO:0030521 "androgen receptor
signaling pathway" evidence=IEA] [GO:0009755 "hormone-mediated
signaling pathway" evidence=IEA] [GO:0007290 "spermatid nucleus
elongation" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005506 "iron ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0001047 "core
promoter binding" evidence=IEA] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00558
GO:GO:0005634 GO:GO:0045893 GO:GO:0030521 GO:GO:0005506
GO:GO:0009755 GO:GO:0033169 GeneTree:ENSGT00530000063039 CTD:55818
KO:K15601 GO:GO:0046293 OMA:RRLQFNK EMBL:CU467088 EMBL:CU928755
RefSeq:XP_003124983.3 Ensembl:ENSSSCT00000009003 GeneID:100517522
KEGG:ssc:100517522 Uniprot:F1SVC8
Length = 1323
Score = 322 (118.4 bits), Expect = 3.1e-46, Sum P(3) = 3.1e-46
Identities = 69/161 (42%), Positives = 96/161 (59%)
Query: 453 KSRESGEPSNIPENEF-ESADG-GAVWDIFRRQDISKLQDYLKKHFREFRHIHCC---PV 507
K+ + G+ + F E + GA+W I+ +D K++++LKK E + P+
Sbjct: 1150 KTIQDGDSDELTIKRFIEGKEKPGALWHIYAAKDTEKIREFLKKVSEEQGQENPADHDPI 1209
Query: 508 Q-QVFYLSSEHKAKLKQEYGIEPWTFIQKLGEAVFVPAGCPHQVRNLKSCIKAALDFVSP 566
Q +YL + +L QEYG++ W +Q LG+ VF+PAG PHQV NL SCIK A DFVSP
Sbjct: 1210 HDQSWYLDRSLRKRLHQEYGVQGWAIVQFLGDVVFIPAGAPHQVHNLYSCIKVAEDFVSP 1269
Query: 567 ENVSQCVRLTEEFRLLPPNHRAKEDKLEVKKMILYAVSQAV 607
E+V C LT+EFR L H EDKL+VK +I +AV AV
Sbjct: 1270 EHVKHCFWLTQEFRYLSQTHTNHEDKLQVKNVIYHAVKDAV 1310
Score = 244 (91.0 bits), Expect = 3.1e-46, Sum P(3) = 3.1e-46
Identities = 60/178 (33%), Positives = 90/178 (50%)
Query: 179 FQWHWAKGEPVIVSNVLENALGLSWDPMVMWRACRQISNTKHRLYLDVKAIDCL--DWCE 236
F+ W +G+PV+VS V W P +R ++ N +V ++C +
Sbjct: 968 FRECWKQGQPVMVSGVHHKLNTELWKPE-SFR--KEFGNQ------EVDLVNCRTNEIIT 1018
Query: 237 GEVNIHQFFKGYTD--GRFDKESWPQILKLKDWPPSNLFEERLPRHNVEFLGCLPFKEYT 294
G + F+ G+ D R E P +LKLKDWPP F + +P + + +P EYT
Sbjct: 1019 G-ATVGDFWDGFEDVPNRLKNEKEPMVLKLKDWPPGEDFRDMMPSRFDDLMANIPLPEYT 1077
Query: 295 HPCAGALNIATKLPKKSLKPDMGPKTYIAYGVAQELGRADSVTKLHCDMSDAVNVLTH 352
G LN+A++LP ++PD+GPK Y AYG+ R T LH D+SDA NV+ +
Sbjct: 1078 RR-DGKLNLASRLPNYFVRPDLGPKMYNAYGLITPEDRKYGTTNLHLDVSDAANVMVY 1134
Score = 49 (22.3 bits), Expect = 3.1e-46, Sum P(3) = 3.1e-46
Identities = 41/188 (21%), Positives = 73/188 (38%)
Query: 29 SMRDFKVDSTPETDSKFDTTPGTDSKVGSNPEKDSKGREKPISDW---KANENGSILCPS 85
S + ++ TPE + P T + + PE+ + G SD K E ++ C +
Sbjct: 425 SAAEAEIAGTPELQKHLEHAPSTSDVLSNKPEEKA-GVSSNSSDSCVEKKVEPPTLGCQT 483
Query: 86 IEL--GGCGNVLELRCTFDENWVAEL-LRKA--EEIAKAHNLEDTPESSERVCTCYNPLG 140
L E CT N + RK+ + AK L+ + E+ + +C N +
Sbjct: 484 QNLKESSVKGDGESCCTRSNNKIQNAPSRKSVLSDPAKLKKLQQSGEAFVQDDSCVNIVA 543
Query: 141 EIDMTNSELIKAASREDSTDNYLYNPAAKDIRHGDLKHFQWHWA-KGEPVIVSNVLEN-A 198
++ E + R+D + +P H F H + E + N ++ A
Sbjct: 544 QLPKCR-ECRLDSLRKDK-EQQKDSPVFCRFFHFRRLQFNKHGVLRVEGFLTPNKYDSEA 601
Query: 199 LGLSWDPM 206
+GL W P+
Sbjct: 602 IGL-WLPL 608
>UNIPROTKB|F1RH75 [details] [associations]
symbol:KDM3B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR003347
Pfam:PF02373 PROSITE:PS51184 SMART:SM00558 GO:GO:0005634
GeneTree:ENSGT00530000063039 OMA:IICKRLR EMBL:CU856219
EMBL:CU928408 Ensembl:ENSSSCT00000015658 Uniprot:F1RH75
Length = 1766
Score = 316 (116.3 bits), Expect = 7.6e-46, Sum P(2) = 7.6e-46
Identities = 68/162 (41%), Positives = 96/162 (59%)
Query: 453 KSRESGEPSNIPENEFESADG--GAVWDIFRRQDISKLQDYLKK----HFREFRHIHCCP 506
K+ + G+ + + GA+W I+ +D K+++ L+K +E H P
Sbjct: 1593 KTIDEGDADEVTKQRIHDGKEKPGALWHIYAAKDAEKIRELLRKVGEEQGQENPPDHD-P 1651
Query: 507 VQ-QVFYLSSEHKAKLKQEYGIEPWTFIQKLGEAVFVPAGCPHQVRNLKSCIKAALDFVS 565
+ Q +YL + +L +EYG++ W +Q LG+AVF+PAG PHQV NL SCIK A DFVS
Sbjct: 1652 IHDQSWYLDQTLRKRLYEEYGVQGWAIVQFLGDAVFIPAGAPHQVHNLYSCIKVAEDFVS 1711
Query: 566 PENVSQCVRLTEEFRLLPPNHRAKEDKLEVKKMILYAVSQAV 607
PE+V C RLT+EFR L H EDKL+VK +I +AV AV
Sbjct: 1712 PEHVKHCFRLTQEFRHLSNTHTNHEDKLQVKNIIYHAVKDAV 1753
Score = 254 (94.5 bits), Expect = 7.6e-46, Sum P(2) = 7.6e-46
Identities = 70/220 (31%), Positives = 110/220 (50%)
Query: 163 LYNPAAKDIRHGDLKHFQWHWAKGEPVIVSNVLENALGLSWDPMVMWRACRQISNTKHRL 222
L++P+ K+ + K F+ W +G+PV+VS V + W P A Q +
Sbjct: 1399 LHDPSNKN----NWKIFRECWKQGQPVLVSGVHKKLKSELWKP----EAFSQEFGDQ--- 1447
Query: 223 YLDVKAIDCLDWCE--GEVNIHQFFKGYTD--GRFDKESW-PQILKLKDWPPSNLFEERL 277
DV ++C + C +V + F+ G+ R E P +LKLKDWPP F + +
Sbjct: 1448 --DVDLVNCRN-CAIISDVKVRDFWDGFEIICKRLRSEDGQPMVLKLKDWPPGEDFRDMM 1504
Query: 278 PRHNVEFLGCLPFKEYTHPCAGALNIATKLPKKSLKPDMGPKTYIAYGVAQELGRADSVT 337
P + + LP EYT G LN+A++LP ++PD+GPK Y AYG+ R T
Sbjct: 1505 PTRFEDLMENLPLPEYTKR-DGRLNLASRLPSYFVRPDLGPKMYNAYGLITAEDRRVGTT 1563
Query: 338 KLHCDMSDAVNVLTHTTDVKLKPEHLAKIEKLKQQHKAQD 377
LH D+SDAVNV+ + + ++ H ++ K + A +
Sbjct: 1564 NLHLDVSDAVNVMVYV-GIPIEGAHDEEVLKTIDEGDADE 1602
Score = 43 (20.2 bits), Expect = 1.0e-23, Sum P(2) = 1.0e-23
Identities = 13/32 (40%), Positives = 17/32 (53%)
Query: 333 ADSVTKLHC-DMSDAVNVLTHTTDVKLKPEHL 363
+DS T D+SD+ L T +K PEHL
Sbjct: 816 SDSSTNSDLSDLSDSEEQLQAKTGLKGIPEHL 847
Score = 37 (18.1 bits), Expect = 4.3e-23, Sum P(2) = 4.3e-23
Identities = 13/53 (24%), Positives = 25/53 (47%)
Query: 358 LKPEHLAKIEKLKQQHKAQDQMEFFGCSQFSDENSHANSSAIPVKNEQCGGKP 410
L+P L++ E +++E S F+ + S ++SSA V ++ P
Sbjct: 629 LQPPKLSREEPSNPFLAFVEKVEHSPFSSFASQASGSSSSATTVTSKAAPSWP 681
>UNIPROTKB|E1BE97 [details] [associations]
symbol:LOC100848816 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR003347
Pfam:PF02373 PROSITE:PS51184 SMART:SM00558 GO:GO:0005634
GeneTree:ENSGT00530000063039 KO:K15601 OMA:IICKRLR
EMBL:DAAA02020398 IPI:IPI00825479 RefSeq:XP_003582470.1
RefSeq:XP_003586349.1 Ensembl:ENSBTAT00000013278 GeneID:100848816
KEGG:bta:100848816 Uniprot:E1BE97
Length = 1759
Score = 316 (116.3 bits), Expect = 1.2e-45, Sum P(2) = 1.2e-45
Identities = 68/162 (41%), Positives = 96/162 (59%)
Query: 453 KSRESGEPSNIPENEFESADG--GAVWDIFRRQDISKLQDYLKK----HFREFRHIHCCP 506
K+ + G+ + + GA+W I+ +D K+++ L+K +E H P
Sbjct: 1586 KTIDEGDADEVTKQRIHDGKEKPGALWHIYAAKDAEKIRELLRKVGEEQGQENPPDHD-P 1644
Query: 507 VQ-QVFYLSSEHKAKLKQEYGIEPWTFIQKLGEAVFVPAGCPHQVRNLKSCIKAALDFVS 565
+ Q +YL + +L +EYG++ W +Q LG+AVF+PAG PHQV NL SCIK A DFVS
Sbjct: 1645 IHDQSWYLDQTLRKRLYEEYGVQGWAIVQFLGDAVFIPAGAPHQVHNLYSCIKVAEDFVS 1704
Query: 566 PENVSQCVRLTEEFRLLPPNHRAKEDKLEVKKMILYAVSQAV 607
PE+V C RLT+EFR L H EDKL+VK +I +AV AV
Sbjct: 1705 PEHVKHCFRLTQEFRHLSNTHTNHEDKLQVKNIIYHAVKDAV 1746
Score = 252 (93.8 bits), Expect = 1.2e-45, Sum P(2) = 1.2e-45
Identities = 67/195 (34%), Positives = 100/195 (51%)
Query: 163 LYNPAAKDIRHGDLKHFQWHWAKGEPVIVSNVLENALGLSWDPMVMWRACRQISNTKHRL 222
L++P+ K+ + K F+ W +G+PV+VS V + W P A Q +
Sbjct: 1391 LHDPSNKN----NWKIFRECWKQGQPVLVSGVHKKLKSELWKP----EAFSQEFGDQ--- 1439
Query: 223 YLDVKAIDCLDWCE--GEVNIHQFFKGYTD--GRFDKESW-PQILKLKDWPPSNLFEERL 277
DV ++C + C +V + F+ G+ R E P +LKLKDWPP F + +
Sbjct: 1440 --DVDLVNCRN-CAIISDVKVRDFWDGFEIICKRLRSEDGQPMVLKLKDWPPGEDFRDMM 1496
Query: 278 PRHNVEFLGCLPFKEYTHPCAGALNIATKLPKKSLKPDMGPKTYIAYGVAQELGRADSVT 337
P + + LP EYT G LN+A++LP ++PD+GPK Y AYG+ R T
Sbjct: 1497 PTRFEDLMENLPLPEYTKR-DGRLNLASRLPSYFVRPDLGPKMYNAYGLITAEDRRVGTT 1555
Query: 338 KLHCDMSDAVNVLTH 352
LH D+SDAVNV+ +
Sbjct: 1556 NLHLDVSDAVNVMVY 1570
Score = 43 (20.2 bits), Expect = 1.0e-23, Sum P(2) = 1.0e-23
Identities = 13/32 (40%), Positives = 17/32 (53%)
Query: 333 ADSVTKLHC-DMSDAVNVLTHTTDVKLKPEHL 363
+DS T D+SD+ L T +K PEHL
Sbjct: 808 SDSSTNSDLSDLSDSEEQLQAKTGLKGIPEHL 839
Score = 37 (18.1 bits), Expect = 4.2e-23, Sum P(2) = 4.2e-23
Identities = 13/53 (24%), Positives = 25/53 (47%)
Query: 358 LKPEHLAKIEKLKQQHKAQDQMEFFGCSQFSDENSHANSSAIPVKNEQCGGKP 410
L+P L++ E +++E S F+ + S ++SSA V ++ P
Sbjct: 621 LQPPKLSREEPSNPFLAFVEKVEHSPFSSFASQASGSSSSATTVTSKAAPSWP 673
>UNIPROTKB|Q7LBC6 [details] [associations]
symbol:KDM3B "Lysine-specific demethylase 3B" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR003347
Pfam:PF02373 PROSITE:PS51184 SMART:SM00558 GO:GO:0005634
GO:GO:0006355 EMBL:CH471062 GO:GO:0046872 GO:GO:0006351
GO:GO:0016568 GO:GO:0016702 eggNOG:NOG305537 KO:K15601
EMBL:AF251039 EMBL:AF338242 EMBL:AB029005 EMBL:AC104116
EMBL:AC113403 EMBL:BC000539 EMBL:BC001202 EMBL:BC146788
IPI:IPI00298935 IPI:IPI00748132 IPI:IPI00749486 RefSeq:NP_057688.2
UniGene:Hs.483486 ProteinModelPortal:Q7LBC6 IntAct:Q7LBC6
MINT:MINT-1195273 STRING:Q7LBC6 PhosphoSite:Q7LBC6 DMDM:308153456
PaxDb:Q7LBC6 PRIDE:Q7LBC6 Ensembl:ENST00000314358
Ensembl:ENST00000394866 GeneID:51780 KEGG:hsa:51780 UCSC:uc003lcy.1
UCSC:uc010jew.1 CTD:51780 GeneCards:GC05P137688 HGNC:HGNC:1337
HPA:HPA016610 MIM:609373 neXtProt:NX_Q7LBC6 PharmGKB:PA25918
InParanoid:Q7LBC6 OMA:IICKRLR OrthoDB:EOG4W9J32 GenomeRNAi:51780
NextBio:55912 ArrayExpress:Q7LBC6 Bgee:Q7LBC6 CleanEx:HS_JMJD1B
Genevestigator:Q7LBC6 GermOnline:ENSG00000120733 Uniprot:Q7LBC6
Length = 1761
Score = 316 (116.3 bits), Expect = 1.2e-45, Sum P(2) = 1.2e-45
Identities = 68/162 (41%), Positives = 96/162 (59%)
Query: 453 KSRESGEPSNIPENEFESADG--GAVWDIFRRQDISKLQDYLKK----HFREFRHIHCCP 506
K+ + G+ + + GA+W I+ +D K+++ L+K +E H P
Sbjct: 1588 KTIDEGDADEVTKQRIHDGKEKPGALWHIYAAKDAEKIRELLRKVGEEQGQENPPDHD-P 1646
Query: 507 VQ-QVFYLSSEHKAKLKQEYGIEPWTFIQKLGEAVFVPAGCPHQVRNLKSCIKAALDFVS 565
+ Q +YL + +L +EYG++ W +Q LG+AVF+PAG PHQV NL SCIK A DFVS
Sbjct: 1647 IHDQSWYLDQTLRKRLYEEYGVQGWAIVQFLGDAVFIPAGAPHQVHNLYSCIKVAEDFVS 1706
Query: 566 PENVSQCVRLTEEFRLLPPNHRAKEDKLEVKKMILYAVSQAV 607
PE+V C RLT+EFR L H EDKL+VK +I +AV AV
Sbjct: 1707 PEHVKHCFRLTQEFRHLSNTHTNHEDKLQVKNIIYHAVKDAV 1748
Score = 252 (93.8 bits), Expect = 1.2e-45, Sum P(2) = 1.2e-45
Identities = 67/195 (34%), Positives = 100/195 (51%)
Query: 163 LYNPAAKDIRHGDLKHFQWHWAKGEPVIVSNVLENALGLSWDPMVMWRACRQISNTKHRL 222
L++P+ K+ + K F+ W +G+PV+VS V + W P A Q +
Sbjct: 1393 LHDPSNKN----NWKIFRECWKQGQPVLVSGVHKKLKSELWKP----EAFSQEFGDQ--- 1441
Query: 223 YLDVKAIDCLDWCE--GEVNIHQFFKGYTD--GRFDKESW-PQILKLKDWPPSNLFEERL 277
DV ++C + C +V + F+ G+ R E P +LKLKDWPP F + +
Sbjct: 1442 --DVDLVNCRN-CAIISDVKVRDFWDGFEIICKRLRSEDGQPMVLKLKDWPPGEDFRDMM 1498
Query: 278 PRHNVEFLGCLPFKEYTHPCAGALNIATKLPKKSLKPDMGPKTYIAYGVAQELGRADSVT 337
P + + LP EYT G LN+A++LP ++PD+GPK Y AYG+ R T
Sbjct: 1499 PTRFEDLMENLPLPEYTKR-DGRLNLASRLPSYFVRPDLGPKMYNAYGLITAEDRRVGTT 1557
Query: 338 KLHCDMSDAVNVLTH 352
LH D+SDAVNV+ +
Sbjct: 1558 NLHLDVSDAVNVMVY 1572
Score = 43 (20.2 bits), Expect = 1.0e-23, Sum P(2) = 1.0e-23
Identities = 13/32 (40%), Positives = 17/32 (53%)
Query: 333 ADSVTKLHC-DMSDAVNVLTHTTDVKLKPEHL 363
+DS T D+SD+ L T +K PEHL
Sbjct: 810 SDSSTNSDLSDLSDSEEQLQAKTGLKGIPEHL 841
>MGI|MGI:1923356 [details] [associations]
symbol:Kdm3b "KDM3B lysine (K)-specific demethylase 3B"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016702 "oxidoreductase activity,
acting on single donors with incorporation of molecular oxygen,
incorporation of two atoms of oxygen" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0055114 "oxidation-reduction
process" evidence=IEA] InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00558 MGI:MGI:1923356 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0006351 GO:GO:0016568
GO:GO:0016702 eggNOG:NOG305537 OrthoDB:EOG4W9J32 EMBL:AK129281
EMBL:BC031981 EMBL:BC038376 EMBL:BC060727 EMBL:BC108415
EMBL:AK018027 EMBL:AK033343 IPI:IPI00664808 IPI:IPI00757477
UniGene:Mm.277906 ProteinModelPortal:Q6ZPY7 STRING:Q6ZPY7
PhosphoSite:Q6ZPY7 PaxDb:Q6ZPY7 PRIDE:Q6ZPY7 CleanEx:MM_JMJD1B
Genevestigator:Q6ZPY7 GermOnline:ENSMUSG00000038773 Uniprot:Q6ZPY7
Length = 1562
Score = 313 (115.2 bits), Expect = 1.9e-45, Sum P(2) = 1.9e-45
Identities = 68/162 (41%), Positives = 96/162 (59%)
Query: 453 KSRESGEPSNIPENEFESADG--GAVWDIFRRQDISKLQDYLKK----HFREFRHIHCCP 506
K+ + G+ + + GA+W I+ +D K+++ L+K +E H P
Sbjct: 1389 KTIDEGDADEVTKQRIHDGKEKPGALWHIYAAKDAEKIRELLRKVGEEQGQENPPDHD-P 1447
Query: 507 VQ-QVFYLSSEHKAKLKQEYGIEPWTFIQKLGEAVFVPAGCPHQVRNLKSCIKAALDFVS 565
+ Q +YL + +L +EYG++ W +Q LG+AVF+PAG PHQV NL SCIK A DFVS
Sbjct: 1448 IHDQSWYLDQILRKRLFEEYGVQGWAIVQFLGDAVFIPAGAPHQVHNLYSCIKVAEDFVS 1507
Query: 566 PENVSQCVRLTEEFRLLPPNHRAKEDKLEVKKMILYAVSQAV 607
PE+V C RLT+EFR L H EDKL+VK +I +AV AV
Sbjct: 1508 PEHVKHCFRLTQEFRHLSNTHTNHEDKLQVKNIIYHAVKDAV 1549
Score = 252 (93.8 bits), Expect = 1.9e-45, Sum P(2) = 1.9e-45
Identities = 67/195 (34%), Positives = 100/195 (51%)
Query: 163 LYNPAAKDIRHGDLKHFQWHWAKGEPVIVSNVLENALGLSWDPMVMWRACRQISNTKHRL 222
L++P+ K+ + K F+ W +G+PV+VS V + W P A Q +
Sbjct: 1194 LHDPSNKN----NWKIFRECWKQGQPVLVSGVHKKLKSELWKP----EAFSQEFGDQ--- 1242
Query: 223 YLDVKAIDCLDWCE--GEVNIHQFFKGYTD--GRFDKESW-PQILKLKDWPPSNLFEERL 277
DV ++C + C +V + F+ G+ R E P +LKLKDWPP F + +
Sbjct: 1243 --DVDLVNCRN-CAIISDVKVRDFWDGFEIICKRLRSEDGQPMVLKLKDWPPGEDFRDMM 1299
Query: 278 PRHNVEFLGCLPFKEYTHPCAGALNIATKLPKKSLKPDMGPKTYIAYGVAQELGRADSVT 337
P + + LP EYT G LN+A++LP ++PD+GPK Y AYG+ R T
Sbjct: 1300 PTRFEDLMENLPLPEYTKR-DGRLNLASRLPSYFVRPDLGPKMYNAYGLITAEDRRVGTT 1358
Query: 338 KLHCDMSDAVNVLTH 352
LH D+SDAVNV+ +
Sbjct: 1359 NLHLDVSDAVNVMVY 1373
Score = 39 (18.8 bits), Expect = 4.1e-23, Sum P(2) = 4.1e-23
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 333 ADSVTKLHC-DMSDAVNVLTHTTDVKLKPEHL 363
+DS T D+SD+ L + +K PEHL
Sbjct: 611 SDSSTNSDLSDLSDSEEQLQAKSGLKGIPEHL 642
Score = 39 (18.8 bits), Expect = 4.1e-23, Sum P(2) = 4.1e-23
Identities = 14/63 (22%), Positives = 25/63 (39%)
Query: 358 LKPEHLAKIEKLKQQHKAQDQMEFFGCSQFSDENSHANSSAIPVKNEQCGGKPXXXXXXX 417
L+P L++ E +++E S F + S ++SSA V ++ P
Sbjct: 424 LQPPKLSREEPSNPFLAFVEKVEHSPFSSFVSQASGSSSSATSVTSKATASWPESHSSAE 483
Query: 418 XXP 420
P
Sbjct: 484 SAP 486
>UNIPROTKB|F1NJZ2 [details] [associations]
symbol:KDM3B "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR003347
Pfam:PF02373 PROSITE:PS51184 SMART:SM00558 GO:GO:0005634
GeneTree:ENSGT00530000063039 OMA:IICKRLR EMBL:AADN02028186
EMBL:AADN02028187 EMBL:AADN02028188 IPI:IPI00589441
Ensembl:ENSGALT00000012413 Uniprot:F1NJZ2
Length = 1755
Score = 315 (115.9 bits), Expect = 2.0e-45, Sum P(2) = 2.0e-45
Identities = 68/162 (41%), Positives = 96/162 (59%)
Query: 453 KSRESGEPSNIPENEFESA--DGGAVWDIFRRQDISKLQDYLKK----HFREFRHIHCCP 506
K+ + G+ ++ + GA+W I+ +D K+++ L+K +E H P
Sbjct: 1582 KTIDEGDADDVTKQRIHEGREKPGALWHIYAAKDAEKIRELLRKVGEEQGQENPPDHD-P 1640
Query: 507 VQ-QVFYLSSEHKAKLKQEYGIEPWTFIQKLGEAVFVPAGCPHQVRNLKSCIKAALDFVS 565
+ Q +YL + +L EYG++ W +Q LG+AVF+PAG PHQV NL SCIK A DFVS
Sbjct: 1641 IHDQSWYLDQTLRKRLYDEYGVQGWAIVQFLGDAVFIPAGAPHQVHNLYSCIKVAEDFVS 1700
Query: 566 PENVSQCVRLTEEFRLLPPNHRAKEDKLEVKKMILYAVSQAV 607
PE+V C RLT+EFR L H EDKL+VK +I +AV AV
Sbjct: 1701 PEHVKHCFRLTQEFRHLSNTHTNHEDKLQVKNIIYHAVKDAV 1742
Score = 251 (93.4 bits), Expect = 2.0e-45, Sum P(2) = 2.0e-45
Identities = 65/195 (33%), Positives = 99/195 (50%)
Query: 163 LYNPAAKDIRHGDLKHFQWHWAKGEPVIVSNVLENALGLSWDPMVMWRACRQISNTKHRL 222
L++P+ K+ + K F+ W +G+PV+VS V + W P + +
Sbjct: 1387 LHDPSNKN----NWKIFRECWKQGQPVLVSGVHKKLKSELWKPEAF---SLEFGDQ---- 1435
Query: 223 YLDVKAIDCLDWCE--GEVNIHQFFKGYT--DGRFDKESW-PQILKLKDWPPSNLFEERL 277
DV ++C + C +V + F+ G+ R E P +LKLKDWPP F + +
Sbjct: 1436 --DVDLVNCRN-CAIISDVKVRDFWDGFEIISKRLRSEDGQPMVLKLKDWPPGEDFRDMM 1492
Query: 278 PRHNVEFLGCLPFKEYTHPCAGALNIATKLPKKSLKPDMGPKTYIAYGVAQELGRADSVT 337
P + + LP EYT G LN+A++LP ++PD+GPK Y AYG+ R T
Sbjct: 1493 PTRFEDLMENLPLPEYTKR-DGRLNLASRLPSYFVRPDLGPKMYNAYGLITAEDRRVGTT 1551
Query: 338 KLHCDMSDAVNVLTH 352
LH D+SDAVNV+ +
Sbjct: 1552 NLHLDVSDAVNVMVY 1566
>UNIPROTKB|Q5ZIX8 [details] [associations]
symbol:KDM3A "Lysine-specific demethylase 3A" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000433
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00291
SMART:SM00558 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 GO:GO:0016568
GO:GO:0016702 eggNOG:NOG305537 EMBL:AJ720656 IPI:IPI00821166
RefSeq:NP_001012909.1 UniGene:Gga.17648 ProteinModelPortal:Q5ZIX8
GeneID:422917 KEGG:gga:422917 CTD:55818 HOGENOM:HOG000007471
KO:K15601 OrthoDB:EOG4FFD0Z NextBio:20825473 Uniprot:Q5ZIX8
Length = 1325
Score = 326 (119.8 bits), Expect = 2.5e-45, Sum P(2) = 2.5e-45
Identities = 70/161 (43%), Positives = 97/161 (60%)
Query: 453 KSRESGEPSNIPENEF-ESADG-GAVWDIFRRQDISKLQDYLKKHFREFRH---IHCCPV 507
K+ + G+ + F ES + GA+W I+ +D K++++LKK E + P+
Sbjct: 1152 KTIQDGDSDELTIKRFTESREKPGALWHIYAAKDTEKIREFLKKVAEEQGQENPVDHDPI 1211
Query: 508 Q-QVFYLSSEHKAKLKQEYGIEPWTFIQKLGEAVFVPAGCPHQVRNLKSCIKAALDFVSP 566
Q +YL + +L QEYG++ W +Q LG+ VF+PAG PHQV NL SCIK A DFVSP
Sbjct: 1212 HDQSWYLDRSLRKRLHQEYGVQGWAIVQFLGDVVFIPAGAPHQVHNLYSCIKVAEDFVSP 1271
Query: 567 ENVSQCVRLTEEFRLLPPNHRAKEDKLEVKKMILYAVSQAV 607
E+V C LT+EFR L H EDKL+VK +I +AV AV
Sbjct: 1272 EHVKHCFWLTQEFRYLSHTHTNHEDKLQVKNVIYHAVKDAV 1312
Score = 235 (87.8 bits), Expect = 2.5e-45, Sum P(2) = 2.5e-45
Identities = 62/179 (34%), Positives = 92/179 (51%)
Query: 179 FQWHWAKGEPVIVSNVLENALGLSWDPMVMWRACRQISNTKHRLYLDVKAIDCL--DWCE 236
F+ W +G+PV+VS V L+ D +WR S K +V ++C +
Sbjct: 969 FRECWKQGQPVMVSGVHHK---LNAD---LWRP---ESFRKEFGQQEVDLVNCRTNEIIT 1019
Query: 237 GEVNIHQFFKGYTD--GRF-DKESWPQILKLKDWPPSNLFEERLPRHNVEFLGCLPFKEY 293
G + F+ G+ D R +E P +LKLKDWPP F + +P + + +P EY
Sbjct: 1020 G-ATVGDFWDGFEDISSRLRTEEGEPMVLKLKDWPPGEDFRDMMPSRFDDLMKNIPLPEY 1078
Query: 294 THPCAGALNIATKLPKKSLKPDMGPKTYIAYGVAQELGRADSVTKLHCDMSDAVNVLTH 352
T G LN+A++LP ++PD+GPK Y AYG+ R T LH D+SDA NV+ +
Sbjct: 1079 TRR-GGKLNLASRLPNYFVRPDLGPKMYNAYGLITPEDRKYGTTNLHLDVSDAANVMVY 1136
Score = 37 (18.1 bits), Expect = 1.4e-24, Sum P(2) = 1.4e-24
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 246 KG-YTDGRFDKESWPQILKLKDWPPSNLFEERL 277
KG + D D SW + +K ++ P NL ++
Sbjct: 700 KGIHEDDDSDTFSWFKCVKGQEHEPENLMPTQI 732
>UNIPROTKB|Q9Y4C1 [details] [associations]
symbol:KDM3A "Lysine-specific demethylase 3A" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0001047 "core promoter binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0007290 "spermatid nucleus elongation"
evidence=IEA] [GO:0036123 "histone H3-K9 dimethylation"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0051573
"negative regulation of histone H3-K9 methylation" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005506 "iron ion
binding" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
[GO:0009755 "hormone-mediated signaling pathway" evidence=IDA]
[GO:0030521 "androgen receptor signaling pathway" evidence=IDA]
[GO:0033169 "histone H3-K9 demethylation" evidence=IDA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0046293 "formaldehyde biosynthetic process" evidence=IDA]
[GO:0050681 "androgen receptor binding" evidence=IDA]
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00558
GO:GO:0005634 GO:GO:0005737 GO:GO:0045893 EMBL:CH471053
GO:GO:0030154 GO:GO:0030521 GO:GO:0005506 GO:GO:0007283
GO:GO:0006351 GO:GO:0016702 GO:GO:0009755 GO:GO:0033169
Pathway_Interaction_DB:ar_pathway GO:GO:0050681 EMBL:AC068288
eggNOG:NOG305537 CTD:55818 KO:K15601 OrthoDB:EOG4FFD0Z
EMBL:AB018285 EMBL:AL832150 EMBL:BX640698 EMBL:CR749581
IPI:IPI00479545 RefSeq:NP_001140160.1 RefSeq:NP_060903.2
UniGene:Hs.557425 ProteinModelPortal:Q9Y4C1 IntAct:Q9Y4C1
STRING:Q9Y4C1 PhosphoSite:Q9Y4C1 DMDM:308153659 PaxDb:Q9Y4C1
PRIDE:Q9Y4C1 Ensembl:ENST00000312912 Ensembl:ENST00000409064
Ensembl:ENST00000409556 GeneID:55818 KEGG:hsa:55818 UCSC:uc002sri.4
GeneCards:GC02P086667 H-InvDB:HIX0002238 HGNC:HGNC:20815 MIM:611512
neXtProt:NX_Q9Y4C1 PharmGKB:PA164721293 InParanoid:Q9Y4C1
BindingDB:Q9Y4C1 ChEMBL:CHEMBL1938209 ChiTaRS:KDM3A
GenomeRNAi:55818 NextBio:61002 ArrayExpress:Q9Y4C1 Bgee:Q9Y4C1
CleanEx:HS_JMJD1A Genevestigator:Q9Y4C1 GermOnline:ENSG00000115548
GO:GO:0046293 Uniprot:Q9Y4C1
Length = 1321
Score = 322 (118.4 bits), Expect = 8.9e-45, Sum P(3) = 8.9e-45
Identities = 69/161 (42%), Positives = 96/161 (59%)
Query: 453 KSRESGEPSNIPENEF-ESADG-GAVWDIFRRQDISKLQDYLKKHFREFRHIHCC---PV 507
K+ + G+ + F E + GA+W I+ +D K++++LKK E + P+
Sbjct: 1148 KTIQDGDSDELTIKRFIEGKEKPGALWHIYAAKDTEKIREFLKKVSEEQGQENPADHDPI 1207
Query: 508 Q-QVFYLSSEHKAKLKQEYGIEPWTFIQKLGEAVFVPAGCPHQVRNLKSCIKAALDFVSP 566
Q +YL + +L QEYG++ W +Q LG+ VF+PAG PHQV NL SCIK A DFVSP
Sbjct: 1208 HDQSWYLDRSLRKRLHQEYGVQGWAIVQFLGDVVFIPAGAPHQVHNLYSCIKVAEDFVSP 1267
Query: 567 ENVSQCVRLTEEFRLLPPNHRAKEDKLEVKKMILYAVSQAV 607
E+V C LT+EFR L H EDKL+VK +I +AV AV
Sbjct: 1268 EHVKHCFWLTQEFRYLSQTHTNHEDKLQVKNVIYHAVKDAV 1308
Score = 241 (89.9 bits), Expect = 8.9e-45, Sum P(3) = 8.9e-45
Identities = 59/178 (33%), Positives = 89/178 (50%)
Query: 179 FQWHWAKGEPVIVSNVLENALGLSWDPMVMWRACRQISNTKHRLYLDVKAIDCL--DWCE 236
F+ W +G+PV+VS V W P + R+ + +V ++C +
Sbjct: 966 FRECWKQGQPVMVSGVHHKLNSELWKP----ESFRKEFGEQ-----EVDLVNCRTNEIIT 1016
Query: 237 GEVNIHQFFKGYTD--GRFDKESWPQILKLKDWPPSNLFEERLPRHNVEFLGCLPFKEYT 294
G + F+ G+ D R E P +LKLKDWPP F + +P + + +P EYT
Sbjct: 1017 G-ATVGDFWDGFEDVPNRLKNEKEPMVLKLKDWPPGEDFRDMMPSRFDDLMANIPLPEYT 1075
Query: 295 HPCAGALNIATKLPKKSLKPDMGPKTYIAYGVAQELGRADSVTKLHCDMSDAVNVLTH 352
G LN+A++LP ++PD+GPK Y AYG+ R T LH D+SDA NV+ +
Sbjct: 1076 RR-DGKLNLASRLPNYFVRPDLGPKMYNAYGLITPEDRKYGTTNLHLDVSDAANVMVY 1132
Score = 38 (18.4 bits), Expect = 8.9e-45, Sum P(3) = 8.9e-45
Identities = 12/38 (31%), Positives = 19/38 (50%)
Query: 143 DMTNSELIKAASREDSTDNYL---YNPAAKDIRHGDLK 177
D++N+ +KA DS +N P+A R +LK
Sbjct: 448 DVSNAPEVKAGVNSDSPNNCSGKKVEPSALACRSQNLK 485
>FB|FBgn0037703 [details] [associations]
symbol:JHDM2 "JmjC domain-containing histone demethylase 2"
species:7227 "Drosophila melanogaster" [GO:2001020 "regulation of
response to DNA damage stimulus" evidence=IGI] [GO:0005634
"nucleus" evidence=ISM] [GO:0032452 "histone demethylase activity"
evidence=ISM] [GO:0016577 "histone demethylation" evidence=ISM]
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00558
EMBL:AE014297 GO:GO:0005634 GeneTree:ENSGT00530000063039
eggNOG:NOG305537 GO:GO:0032452 KO:K15601 EMBL:BT003787
RefSeq:NP_788611.1 UniGene:Dm.26190 MINT:MINT-1601605
EnsemblMetazoa:FBtr0082063 GeneID:41143 KEGG:dme:Dmel_CG8165
UCSC:CG8165-RA CTD:41143 FlyBase:FBgn0037703 InParanoid:Q9VHC5
OMA:SHTNHED OrthoDB:EOG4XPNWR GenomeRNAi:41143 NextBio:822388
Uniprot:Q9VHC5
Length = 854
Score = 305 (112.4 bits), Expect = 1.0e-44, Sum P(2) = 1.0e-44
Identities = 69/157 (43%), Positives = 96/157 (61%)
Query: 453 KSRESGEPSNIPENEFESAD--GGAVWDIFRRQDISKLQDYLKKHFRE--FR-HIHCCPV 507
K+ E G I +S D GA+W IF +D K++D L + E FR P+
Sbjct: 673 KAIEIGGCDYITRARCQSPDVLPGALWHIFPARDADKIRDLLNRVTLEKGFRLEPDHDPI 732
Query: 508 Q-QVFYLSSEHKAKLKQEYGIEPWTFIQKLGEAVFVPAGCPHQVRNLKSCIKAALDFVSP 566
Q +YL + +A+L +EYG+E +Q LG+AVF+PAG PHQV+NL +CIK A DFVSP
Sbjct: 733 HDQNWYLDDKLRARLFKEYGVEGHPIVQCLGDAVFIPAGAPHQVQNLHNCIKVAEDFVSP 792
Query: 567 ENVSQCVRLTEEFRLLPPNHRAKEDKLEVKKMILYAV 603
EN++ C LT EFR L +H EDKL++K +I +A+
Sbjct: 793 ENITHCYHLTHEFRRLSHSHTNHEDKLQIKNIIYHAI 829
Score = 246 (91.7 bits), Expect = 1.0e-44, Sum P(2) = 1.0e-44
Identities = 71/189 (37%), Positives = 95/189 (50%)
Query: 170 DIRHGDLKH-FQWHWAKGEPVIVSNVLENALGLS-WDPMVMWRACRQISNTKHRLYLDVK 227
D H D + FQ W G+PV++S V + L L W P CR + + L
Sbjct: 480 DAMHPDNRVLFQEVWKCGQPVMISEVARS-LNLDLWHPQAF---CRDFGDKPNDL----- 530
Query: 228 AIDCLDW-CEGEVNIHQFFKGY---TDGRFDKESWPQILKLKDWPPSNLFEERLPRHNVE 283
I+CL+ + F++G+ T D P +LKLKDWPP + F E LP +
Sbjct: 531 -INCLNGNLVPNQPMRHFWEGFQCMTKRLPDAYGKPMLLKLKDWPPGDDFAEILPTRFAD 589
Query: 284 FLGCLPFKEYTHPCAGALNIATKLPKKSLKPDMGPKTYIAYGVAQELGRADSVTKLHCDM 343
+ LP EYT G LNIA+ LPK + PD+GPK Y AYG A L T LH D+
Sbjct: 590 LMKGLPMPEYTLR-TGNLNIASCLPKMFVPPDLGPKMYNAYGSA--LHPDKGTTNLHLDI 646
Query: 344 SDAVNVLTH 352
SDAVN++ +
Sbjct: 647 SDAVNIMVY 655
>MGI|MGI:98847 [details] [associations]
symbol:Kdm3a "lysine (K)-specific demethylase 3A"
species:10090 "Mus musculus" [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IDA] [GO:0001047
"core promoter binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0005506 "iron ion binding" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IMP] [GO:0007290 "spermatid
nucleus elongation" evidence=IMP] [GO:0009755 "hormone-mediated
signaling pathway" evidence=ISO] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0030521 "androgen receptor
signaling pathway" evidence=ISO] [GO:0033169 "histone H3-K9
demethylation" evidence=ISO] [GO:0036123 "histone H3-K9
dimethylation" evidence=IMP;IDA] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0046293 "formaldehyde biosynthetic
process" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0050681 "androgen receptor binding" evidence=ISO]
[GO:0051573 "negative regulation of histone H3-K9 methylation"
evidence=IMP] [GO:0055114 "oxidation-reduction process"
evidence=IEA] InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184
SMART:SM00558 MGI:MGI:98847 GO:GO:0005634 GO:GO:0005737
GO:GO:0030521 GO:GO:0005506 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 GO:GO:0016702 GO:GO:0001047 GO:GO:0009755
GO:GO:0033169 GO:GO:0000976 GO:GO:0051573 GO:GO:0007290
GeneTree:ENSGT00530000063039 eggNOG:NOG305537 CTD:55818 KO:K15601
OrthoDB:EOG4FFD0Z GO:GO:0046293 EMBL:AK129204 EMBL:BC026605
EMBL:BC031158 EMBL:BC031200 EMBL:BC059264 EMBL:AK144825
EMBL:AK166797 EMBL:DQ323991 IPI:IPI00460716 IPI:IPI00755968
RefSeq:NP_001033784.2 RefSeq:NP_766589.1 UniGene:Mm.260479
ProteinModelPortal:Q6PCM1 IntAct:Q6PCM1 STRING:Q6PCM1
PhosphoSite:Q6PCM1 PaxDb:Q6PCM1 PRIDE:Q6PCM1
Ensembl:ENSMUST00000065509 Ensembl:ENSMUST00000167220 GeneID:104263
KEGG:mmu:104263 UCSC:uc009cgy.2 InParanoid:Q6PCM1 OMA:RRLQFNK
NextBio:356834 Bgee:Q6PCM1 CleanEx:MM_JMJD1A Genevestigator:Q6PCM1
GermOnline:ENSMUSG00000053470 GO:GO:0036123 Uniprot:Q6PCM1
Length = 1323
Score = 320 (117.7 bits), Expect = 1.2e-44, Sum P(3) = 1.2e-44
Identities = 67/151 (44%), Positives = 92/151 (60%)
Query: 474 GAVWDIFRRQDISKLQDYLKKHFREFRHIHCC---PVQ-QVFYLSSEHKAKLKQEYGIEP 529
GA+W I+ +D K++++LKK E + P+ Q +YL + +L QEYG++
Sbjct: 1173 GALWHIYAAKDTEKIREFLKKVSEEQGQDNPADHDPIHDQSWYLDRSLRKRLYQEYGVQG 1232
Query: 530 WTFIQKLGEAVFVPAGCPHQVRNLKSCIKAALDFVSPENVSQCVRLTEEFRLLPPNHRAK 589
W +Q LG+ VF+PAG PHQV NL SCIK A DFVSPE+V C LT+EFR L H
Sbjct: 1233 WAIVQFLGDVVFIPAGAPHQVHNLYSCIKVAEDFVSPEHVKHCFWLTQEFRYLSQTHTNH 1292
Query: 590 EDKLEVKKMILYAVSQAVKDI-SDPGAANKP 619
EDKL+VK +I +AV AV + + + KP
Sbjct: 1293 EDKLQVKNVIYHAVKDAVAMLKASESSLGKP 1323
Score = 240 (89.5 bits), Expect = 1.2e-44, Sum P(3) = 1.2e-44
Identities = 61/180 (33%), Positives = 91/180 (50%)
Query: 179 FQWHWAKGEPVIVSNVLENALGLSWDPMVMWRACRQISNTKHRLYLDVKAIDCL--DWCE 236
F+ W +G+PV+VS V W P + R+ + +V ++C +
Sbjct: 966 FRECWKQGQPVMVSGVHHKLNTELWKP----ESFRKEFGEQ-----EVDLVNCRTNEIIT 1016
Query: 237 GEVNIHQFFKGYTD--GRF--DKESWPQILKLKDWPPSNLFEERLPRHNVEFLGCLPFKE 292
G + F+ G+ D R DKE P +LKLKDWPP F + +P + + +P E
Sbjct: 1017 G-ATVGDFWDGFEDVPNRLKNDKEKEPMVLKLKDWPPGEDFRDMMPSRFDDLMANIPLPE 1075
Query: 293 YTHPCAGALNIATKLPKKSLKPDMGPKTYIAYGVAQELGRADSVTKLHCDMSDAVNVLTH 352
YT G LN+A++LP ++PD+GPK Y AYG+ R T LH D+SDA NV+ +
Sbjct: 1076 YTRR-DGKLNLASRLPNYFVRPDLGPKMYNAYGLITPEDRKYGTTNLHLDVSDAANVMVY 1134
Score = 40 (19.1 bits), Expect = 1.2e-44, Sum P(3) = 1.2e-44
Identities = 7/35 (20%), Positives = 15/35 (42%)
Query: 26 RSASMRDFKVDSTPETDSKFDTTPGTDSKVGSNPE 60
+++S + + +TPE + T + PE
Sbjct: 422 KTSSKAELDIATTPELQKHLEHAASTSDDLSDKPE 456
Score = 40 (19.1 bits), Expect = 3.3e-24, Sum P(2) = 3.3e-24
Identities = 19/89 (21%), Positives = 38/89 (42%)
Query: 325 GVAQELGRADSVTKLHCDMSDAVNVLTH-------TTDVKLKPEHLAKIEKLKQQHKAQD 377
G+ +E A + +K D++ + H + D+ KPE A + L A+
Sbjct: 413 GLPKECLPAKTSSKAELDIATTPELQKHLEHAASTSDDLSDKPEVKAGVTSLNSC--AEK 470
Query: 378 QMEFFGCSQFSDENSHANSSAIPVKNEQC 406
++E S ++ + +++ V NE C
Sbjct: 471 KVE---PSHLGSQSQNLKETSVKVDNESC 496
>RGD|708351 [details] [associations]
symbol:Kdm3a "lysine (K)-specific demethylase 3A" species:10116
"Rattus norvegicus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=ISO] [GO:0001047 "core
promoter binding" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0005506 "iron ion
binding" evidence=ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA;ISO] [GO:0007290 "spermatid nucleus
elongation" evidence=ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0009755 "hormone-mediated signaling pathway"
evidence=ISO] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0030521 "androgen receptor signaling pathway"
evidence=ISO] [GO:0033169 "histone H3-K9 demethylation"
evidence=ISO] [GO:0036123 "histone H3-K9 dimethylation"
evidence=ISO] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0046293 "formaldehyde biosynthetic process" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0050681 "androgen
receptor binding" evidence=ISO] [GO:0051573 "negative regulation of
histone H3-K9 methylation" evidence=ISO] InterPro:IPR003347
Pfam:PF02373 PROSITE:PS51184 SMART:SM00558 RGD:708351 GO:GO:0005634
GO:GO:0005737 GO:GO:0030154 GO:GO:0006355 GO:GO:0046872
GO:GO:0007283 GO:GO:0006351 GO:GO:0016568 GO:GO:0016702
eggNOG:NOG305537 CTD:55818 HOGENOM:HOG000007471 KO:K15601
EMBL:X59993 IPI:IPI00566177 PIR:S28499 RefSeq:NP_786940.1
UniGene:Rn.10541 ProteinModelPortal:Q63679 STRING:Q63679
PRIDE:Q63679 GeneID:312440 KEGG:rno:312440 UCSC:RGD:708351
NextBio:664882 ArrayExpress:Q63679 Genevestigator:Q63679
GermOnline:ENSRNOG00000007814 Uniprot:Q63679
Length = 1214
Score = 317 (116.6 bits), Expect = 3.0e-44, Sum P(3) = 3.0e-44
Identities = 65/138 (47%), Positives = 87/138 (63%)
Query: 474 GAVWDIFRRQDISKLQDYLKKHFREFRHIHCC---PVQ-QVFYLSSEHKAKLKQEYGIEP 529
GA+W I+ +D K++++LKK E + P+ Q +YL + +L QEYG++
Sbjct: 1057 GALWHIYAAKDTEKIREFLKKVSEEQGQENPADHDPIHDQSWYLDRSLRKRLYQEYGVQG 1116
Query: 530 WTFIQKLGEAVFVPAGCPHQVRNLKSCIKAALDFVSPENVSQCVRLTEEFRLLPPNHRAK 589
W +Q LG+ VF+PAG PHQV NL SCIK A DFVSPE+V C LT+EFR L H
Sbjct: 1117 WAIVQFLGDVVFIPAGAPHQVHNLYSCIKVAEDFVSPEHVKHCFWLTQEFRHLSQTHTNH 1176
Query: 590 EDKLEVKKMILYAVSQAV 607
EDKL+VK +I +AV AV
Sbjct: 1177 EDKLQVKNVIYHAVKDAV 1194
Score = 236 (88.1 bits), Expect = 3.0e-44, Sum P(3) = 3.0e-44
Identities = 60/180 (33%), Positives = 91/180 (50%)
Query: 179 FQWHWAKGEPVIVSNVLENALGLSWDPMVMWRACRQISNTKHRLYLDVKAIDCL--DWCE 236
F+ W +G+PV+VS V W P + R+ + +V ++C +
Sbjct: 850 FRECWKQGQPVMVSGVHHKLNTELWKP----ESFRKEFGEQ-----EVDLVNCRTNEIIT 900
Query: 237 GEVNIHQFFKGYTD--GRF--DKESWPQILKLKDWPPSNLFEERLPRHNVEFLGCLPFKE 292
G + F+ G+ D R +KE P +LKLKDWPP F + +P + + +P E
Sbjct: 901 G-ATVGDFWDGFEDVPNRLKNEKEKEPMVLKLKDWPPGEDFRDMMPSRFDDLMANIPLPE 959
Query: 293 YTHPCAGALNIATKLPKKSLKPDMGPKTYIAYGVAQELGRADSVTKLHCDMSDAVNVLTH 352
YT G LN+A++LP ++PD+GPK Y AYG+ R T LH D+SDA NV+ +
Sbjct: 960 YTRR-DGKLNLASRLPNYFVRPDLGPKMYNAYGLITPEDRKYGTTNLHLDVSDAANVMVY 1018
Score = 42 (19.8 bits), Expect = 3.0e-44, Sum P(3) = 3.0e-44
Identities = 24/116 (20%), Positives = 42/116 (36%)
Query: 48 TPGTDSKVGSNPEKDSKGREKPISDW--KANENGSILCP--SIELGGCGNVLELRCTFDE 103
T G +++G+ K S+ +S +E +CP S+ C +L L CT
Sbjct: 136 TCGNSTRIGAVKRKSSENNGSSVSKQAKSCSEVSPSMCPVQSVPTTVCKEIL-LGCTAAT 194
Query: 104 NWVAELLRKAEEIAKAHNL-EDTPESS------ERVCTCYNPLGEIDMTNSELIKA 152
+ N+ P+ E + +C N E+ T ++ KA
Sbjct: 195 PSSNRQQNTPQAANSPPNIGAKLPQGCHKQSLPEEISSCLNTKSEVLRTKPDVCKA 250
>UNIPROTKB|E1C232 [details] [associations]
symbol:KDM3A "Lysine-specific demethylase 3A" species:9031
"Gallus gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0001047 "core
promoter binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005506
"iron ion binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007290
"spermatid nucleus elongation" evidence=IEA] [GO:0009755
"hormone-mediated signaling pathway" evidence=IEA] [GO:0030521
"androgen receptor signaling pathway" evidence=IEA] [GO:0033169
"histone H3-K9 demethylation" evidence=IEA] [GO:0036123 "histone
H3-K9 dimethylation" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0046293 "formaldehyde biosynthetic process" evidence=IEA]
[GO:0050681 "androgen receptor binding" evidence=IEA] [GO:0051573
"negative regulation of histone H3-K9 methylation" evidence=IEA]
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00558
GO:GO:0005634 GO:GO:0045893 GO:GO:0030521 GO:GO:0005506
GO:GO:0009755 GO:GO:0033169 GeneTree:ENSGT00530000063039
GO:GO:0046293 OMA:RRLQFNK EMBL:AADN02014773 IPI:IPI00586981
Ensembl:ENSGALT00000025482 ArrayExpress:E1C232 Uniprot:E1C232
Length = 1333
Score = 308 (113.5 bits), Expect = 2.8e-43, Sum P(2) = 2.8e-43
Identities = 70/167 (41%), Positives = 97/167 (58%)
Query: 453 KSRESGEPSNIPENEF-ESADG-GAVWDIFRRQDISKLQDYLKKHFREFRH---IHCCPV 507
K+ + G+ + F ES + GA+W I+ +D K++++LKK E + P+
Sbjct: 1154 KTIQDGDSDELTIKRFTESREKPGALWHIYAAKDTEKIREFLKKVAEEQGQENPVDHDPI 1213
Query: 508 Q-QVFYLSSEHKAKLKQEYGIEPWTFIQKLGEAVFVPAGCPHQVR------NLKSCIKAA 560
Q +YL + +L QEYG++ W +Q LG+ VF+PAG PHQ R NL SCIK A
Sbjct: 1214 HDQSWYLDRSLRKRLHQEYGVQGWAIVQFLGDVVFIPAGAPHQARTTGTVHNLYSCIKVA 1273
Query: 561 LDFVSPENVSQCVRLTEEFRLLPPNHRAKEDKLEVKKMILYAVSQAV 607
DFVSPE+V C LT+EFR L H EDKL+VK +I +AV AV
Sbjct: 1274 EDFVSPEHVKHCFWLTQEFRYLSHTHTNHEDKLQVKNVIYHAVKDAV 1320
Score = 235 (87.8 bits), Expect = 2.8e-43, Sum P(2) = 2.8e-43
Identities = 62/179 (34%), Positives = 92/179 (51%)
Query: 179 FQWHWAKGEPVIVSNVLENALGLSWDPMVMWRACRQISNTKHRLYLDVKAIDCL--DWCE 236
F+ W +G+PV+VS V L+ D +WR S K +V ++C +
Sbjct: 971 FRECWKQGQPVMVSGVHHK---LNAD---LWRP---ESFRKEFGQQEVDLVNCRTNEIIT 1021
Query: 237 GEVNIHQFFKGYTD--GRF-DKESWPQILKLKDWPPSNLFEERLPRHNVEFLGCLPFKEY 293
G + F+ G+ D R +E P +LKLKDWPP F + +P + + +P EY
Sbjct: 1022 G-ATVGDFWDGFEDISSRLRTEEGEPMVLKLKDWPPGEDFRDMMPSRFDDLMKNIPLPEY 1080
Query: 294 THPCAGALNIATKLPKKSLKPDMGPKTYIAYGVAQELGRADSVTKLHCDMSDAVNVLTH 352
T G LN+A++LP ++PD+GPK Y AYG+ R T LH D+SDA NV+ +
Sbjct: 1081 TRR-GGKLNLASRLPNYFVRPDLGPKMYNAYGLITPEDRKYGTTNLHLDVSDAANVMVY 1138
Score = 37 (18.1 bits), Expect = 1.6e-22, Sum P(2) = 1.6e-22
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 246 KG-YTDGRFDKESWPQILKLKDWPPSNLFEERL 277
KG + D D SW + +K ++ P NL ++
Sbjct: 702 KGIHEDDDSDTFSWFKCVKGQEHEPENLMPTQI 734
>MGI|MGI:1918614 [details] [associations]
symbol:Jmjd1c "jumonji domain containing 1C" species:10090
"Mus musculus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016702 "oxidoreductase
activity, acting on single donors with incorporation of molecular
oxygen, incorporation of two atoms of oxygen" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] InterPro:IPR003347
Pfam:PF02373 PROSITE:PS51184 SMART:SM00558 MGI:MGI:1918614
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0006351
GO:GO:0016568 GO:GO:0016702 GeneTree:ENSGT00530000063039 CTD:221037
eggNOG:NOG305537 HOVERGEN:HBG079631 KO:K11449 OrthoDB:EOG447FS9
ChiTaRS:JMJD1C EMBL:AK173162 EMBL:AC155712 EMBL:AC156272
EMBL:AK077400 EMBL:AK082106 EMBL:AK085500 EMBL:BC068318
IPI:IPI00749954 RefSeq:NP_001229325.1 UniGene:Mm.23846
IntAct:Q69ZK6 STRING:Q69ZK6 PhosphoSite:Q69ZK6 PRIDE:Q69ZK6
Ensembl:ENSMUST00000173689 GeneID:108829 KEGG:mmu:108829
UCSC:uc007fls.2 UCSC:uc011xfo.1 HOGENOM:HOG000113130
InParanoid:Q69ZK6 NextBio:361361 Bgee:Q69ZK6 CleanEx:MM_JMJD1C
Genevestigator:Q69ZK6 GermOnline:ENSMUSG00000037876 Uniprot:Q69ZK6
Length = 2350
Score = 248 (92.4 bits), Expect = 3.5e-35, Sum P(3) = 3.5e-35
Identities = 52/140 (37%), Positives = 88/140 (62%)
Query: 474 GAVWDIFRRQDISKLQDYLKKHFREFRHIHCCPVQ-----QVFYLSSEHKAKLKQEYGIE 528
GA+W I+ +D+ K++++L+K +E + + P Q +Y++ + + +L +EYG+
Sbjct: 2198 GALWHIYAGKDVDKIREFLQKISKE-QGLEVLPEHDPIRDQSWYVNRKLRQRLLEEYGVR 2256
Query: 529 PWTFIQKLGEAVFVPAGCPHQVRNLKSCIKAALDFVSPENVSQCVRLTEEFRLLPPNHRA 588
T IQ LG+A+ +PAG HQV+N SC++ DFVSPE++ Q LT+E RLL
Sbjct: 2257 ACTLIQFLGDAIVLPAGTLHQVQNFHSCVQVTEDFVSPEHLVQSFHLTQELRLLKEEINY 2316
Query: 589 KEDKLEVKKMILYAVSQAVK 608
+DKL+VK ++ +AV + V+
Sbjct: 2317 -DDKLQVKNILYHAVKEMVR 2335
Score = 229 (85.7 bits), Expect = 3.5e-35, Sum P(3) = 3.5e-35
Identities = 61/188 (32%), Positives = 95/188 (50%)
Query: 169 KDIRHGD-LKHFQWHWAKGEPVIVSNVLENALGLSWDPMVMWRACRQISNTKHRLYLDVK 227
KD ++ + K F+ W +G+P +VS V + +S +W+A IS D+
Sbjct: 1981 KDYKNSNNWKLFKECWKQGQPAVVSGV-HKKMNIS-----LWKA-ESISLDFGDHQADL- 2032
Query: 228 AIDCLDWCEGEVNIHQFFKGYTD-GRFDKESWPQ--ILKLKDWPPSNLFEERLPRHNVEF 284
++C D N+ +F+ G+ + + K + +LKLKD P F+ +P +F
Sbjct: 2033 -LNCKDSIVSNANVKEFWDGFEEVSKRQKNKGGETVVLKLKDCPSGEDFKAMMPTRYEDF 2091
Query: 285 LGCLPFKEYTHPCAGALNIATKLPKKSLKPDMGPKTYIAYGVAQELGRADSVTKLHCDMS 344
L CLP EY +P G N+A+ LP ++PD+GP+ AYGVA T LH + S
Sbjct: 2092 LRCLPLPEYCNP-EGKFNLASHLPGFFVRPDLGPRLCSAYGVAAAKDHDIGTTNLHIEAS 2150
Query: 345 DAVNVLTH 352
D VNVL +
Sbjct: 2151 DVVNVLVY 2158
Score = 48 (22.0 bits), Expect = 3.5e-35, Sum P(3) = 3.5e-35
Identities = 15/54 (27%), Positives = 25/54 (46%)
Query: 39 PETDSKFDTTPGTDSKVGSNP-EKDSKGREKPISDW---KANENGSILCPSIEL 88
P + +K D+ P E+ S G K +D+ +A E G I+ P++ L
Sbjct: 1120 PPSSTKVDSVPSVPLASKDRVCERSSSGANK--TDYLKPEAGETGRIILPNVNL 1171
Score = 45 (20.9 bits), Expect = 1.2e-14, Sum P(4) = 1.2e-14
Identities = 12/37 (32%), Positives = 19/37 (51%)
Query: 308 PKKSLKPDMGPKTYIAYGVAQELGRADSVTKLHCDMS 344
PK + PD K+ AYG +Q +G K+ ++S
Sbjct: 466 PKITHSPD-SVKSKAAYGNSQAVGERRLANKIEHELS 501
Score = 39 (18.8 bits), Expect = 1.2e-14, Sum P(4) = 1.2e-14
Identities = 20/93 (21%), Positives = 32/93 (34%)
Query: 342 DMSDAVNVLTHTTDVKLKPEHLAKIEKLKQQHKAQDQMEFFGCSQ-FSDENSHANSSAIP 400
D+ DA+++L +K H + Q M G SQ + H+N +++
Sbjct: 1726 DLLDAMHILREKYGIK---SHCHCTNRQNLQGGNVPTMN--GVSQVLQNVLHHSNKTSVS 1780
Query: 401 VKNEQCGGKPXXXXXXXXXPQDSQICDSMLNDP 433
+ Q P S DS L P
Sbjct: 1781 LPESQQQNSPQKSQTNGNSSPGSASTDSRLTPP 1813
Score = 37 (18.1 bits), Expect = 4.9e-34, Sum P(3) = 4.9e-34
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 141 EIDMTNSELIKAASREDSTD 160
++D+T S + A S D D
Sbjct: 388 KVDLTQSSVTNAPSGSDKRD 407
>UNIPROTKB|Q15652 [details] [associations]
symbol:JMJD1C "Probable JmjC domain-containing histone
demethylation protein 2C" species:9606 "Homo sapiens" [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016702 "oxidoreductase activity,
acting on single donors with incorporation of molecular oxygen,
incorporation of two atoms of oxygen" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=TAS] [GO:0046966 "thyroid
hormone receptor binding" evidence=TAS] [GO:0005622 "intracellular"
evidence=NAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0007596
"blood coagulation" evidence=TAS] [GO:0005515 "protein binding"
evidence=IPI] Reactome:REACT_604 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00558 GO:GO:0005654 GO:GO:0006355
GO:GO:0046872 GO:GO:0007596 GO:GO:0006351 GO:GO:0016568
GO:GO:0016702 GO:GO:0046966 EMBL:EF068222 EMBL:BX537954
EMBL:AL713895 EMBL:AL590502 EMBL:AL607128 EMBL:AC022022
EMBL:AK027280 EMBL:AL831917 EMBL:AB037801 EMBL:L40411
IPI:IPI00384202 IPI:IPI00902772 IPI:IPI01012411 RefSeq:NP_004232.2
RefSeq:NP_116165.1 UniGene:Hs.413416 PDB:2YPD PDBsum:2YPD
ProteinModelPortal:Q15652 IntAct:Q15652 STRING:Q15652
PhosphoSite:Q15652 DMDM:85541650 PaxDb:Q15652 PRIDE:Q15652
Ensembl:ENST00000399251 Ensembl:ENST00000399262
Ensembl:ENST00000542921 GeneID:221037 KEGG:hsa:221037
UCSC:uc001jml.3 CTD:221037 GeneCards:GC10M064926 HGNC:HGNC:12313
MIM:604503 neXtProt:NX_Q15652 PharmGKB:PA128394767 eggNOG:NOG305537
HOVERGEN:HBG079631 InParanoid:Q15652 KO:K11449 OMA:YKMKHSV
OrthoDB:EOG447FS9 ChiTaRS:JMJD1C GenomeRNAi:221037 NextBio:91161
ArrayExpress:Q15652 Bgee:Q15652 CleanEx:HS_JMJD1C
Genevestigator:Q15652 GermOnline:ENSG00000171988 Uniprot:Q15652
Length = 2540
Score = 248 (92.4 bits), Expect = 1.6e-34, Sum P(4) = 1.6e-34
Identities = 52/140 (37%), Positives = 88/140 (62%)
Query: 474 GAVWDIFRRQDISKLQDYLKKHFREFRHIHCCPVQ-----QVFYLSSEHKAKLKQEYGIE 528
GA+W I+ +D+ K++++L+K +E + + P Q +Y++ + + +L +EYG+
Sbjct: 2388 GALWHIYAGKDVDKIREFLQKISKE-QGLEVLPEHDPIRDQSWYVNKKLRQRLLEEYGVR 2446
Query: 529 PWTFIQKLGEAVFVPAGCPHQVRNLKSCIKAALDFVSPENVSQCVRLTEEFRLLPPNHRA 588
T IQ LG+A+ +PAG HQV+N SCI+ DFVSPE++ + LT+E RLL
Sbjct: 2447 TCTLIQFLGDAIVLPAGALHQVQNFHSCIQVTEDFVSPEHLVESFHLTQELRLLKEEINY 2506
Query: 589 KEDKLEVKKMILYAVSQAVK 608
+DKL+VK ++ +AV + V+
Sbjct: 2507 -DDKLQVKNILYHAVKEMVR 2525
Score = 223 (83.6 bits), Expect = 1.6e-34, Sum P(4) = 1.6e-34
Identities = 58/188 (30%), Positives = 94/188 (50%)
Query: 169 KDIRHG-DLKHFQWHWAKGEPVIVSNVLENALGLSWDPMVMWRACRQISNTKHRLYLDVK 227
KD ++ + K F+ W +G+P +VS V + +S +W+A IS D+
Sbjct: 2171 KDYKNSSNWKLFKECWKQGQPAVVSGV-HKKMNIS-----LWKA-ESISLDFGDHQADL- 2222
Query: 228 AIDCLDWCEGEVNIHQFFKGYTD---GRFDKESWPQILKLKDWPPSNLFEERLPRHNVEF 284
++C D N+ +F+ G+ + + +K +LKLKDWP F+ +P +
Sbjct: 2223 -LNCKDSIISNANVKEFWDGFEEVSKRQKNKSGETVVLKLKDWPSGEDFKTMMPARYEDL 2281
Query: 285 LGCLPFKEYTHPCAGALNIATKLPKKSLKPDMGPKTYIAYGVAQELGRADSVTKLHCDMS 344
L LP EY +P G N+A+ LP ++PD+GP+ AYGV T LH ++S
Sbjct: 2282 LKSLPLPEYCNP-EGKFNLASHLPGFFVRPDLGPRLCSAYGVVAAKDHDIGTTNLHIEVS 2340
Query: 345 DAVNVLTH 352
D VN+L +
Sbjct: 2341 DVVNILVY 2348
Score = 51 (23.0 bits), Expect = 1.6e-34, Sum P(4) = 1.6e-34
Identities = 19/71 (26%), Positives = 32/71 (45%)
Query: 108 ELLRKAEEIAKAHNLEDTPESSERVCTCYNPLGEIDMTNSELIKAASREDSTDNYLYNPA 167
+LL + + K H +E P+ + V P ID+TN ++ ++E+S+ L
Sbjct: 477 DLLPQECNMDKTHTMELLPKE-KFVSRPPTPKCVIDITNDTNLEKVAQENSSTFGLQTLQ 535
Query: 168 AKDIRHGDLKH 178
D D KH
Sbjct: 536 KMDPNVSDSKH 546
Score = 44 (20.5 bits), Expect = 1.6e-34, Sum P(4) = 1.6e-34
Identities = 12/40 (30%), Positives = 22/40 (55%)
Query: 41 TDSKFDTTPGTDSKVGSNPEKDSKGREKPISDWKANENGS 80
TD+ D + +DS+ + D+ +KP ++ K N+N S
Sbjct: 369 TDNVSDFSESSDSENSNKRIIDNSSEQKPENELK-NKNTS 407
Score = 44 (20.5 bits), Expect = 5.1e-34, Sum P(3) = 5.1e-34
Identities = 9/24 (37%), Positives = 15/24 (62%)
Query: 39 PETDSKFDTTPGTDSKVGSNPEKD 62
PE+ + +T P ++ GS+PE D
Sbjct: 1971 PESQQQ-NTPPKSEKNGGSSPESD 1993
Score = 42 (19.8 bits), Expect = 1.3e-33, Sum P(4) = 1.3e-33
Identities = 12/42 (28%), Positives = 23/42 (54%)
Query: 116 IAKAHNLEDTPESSERVCTCYNPLGEIDMTNSELIKAASRED 157
IA A LE + S++ + + + ++D+T S + A+S D
Sbjct: 548 IANAKFLETAKKDSDQ--SWVSDVVKVDLTQSSVTNASSGND 587
Score = 39 (18.8 bits), Expect = 2.7e-33, Sum P(4) = 2.7e-33
Identities = 16/56 (28%), Positives = 26/56 (46%)
Query: 74 KANENGSILCPSIELGGCGNVLELRCTFDENWVAELL-RKAEEIAKAHNLEDTPES 128
K+ +NG P ++G + +W+A+L +KA E K N E T E+
Sbjct: 1981 KSEKNGGS-SPESDVGTDNKLTPPESQSPLHWLADLAEQKARE-EKKENKELTLEN 2034
>RGD|620634 [details] [associations]
symbol:Hr "hair growth associated" species:10116 "Rattus
norvegicus" [GO:0000118 "histone deacetylase complex" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA;ISO;IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0016604 "nuclear
body" evidence=IEA;ISO] [GO:0042809 "vitamin D receptor binding"
evidence=IPI] [GO:0042826 "histone deacetylase binding"
evidence=IDA] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IDA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA;ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0046966 "thyroid hormone receptor binding" evidence=IPI]
[GO:0051291 "protein heterooligomerization" evidence=IDA]
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00558
RGD:620634 GO:GO:0003714 GO:GO:0045892 GO:GO:0051291 GO:GO:0046872
GO:GO:0003677 GO:GO:0006351 GO:GO:0043433 GO:GO:0042826
GO:GO:0016604 GO:GO:0000118 CTD:55806 eggNOG:NOG243648
HOGENOM:HOG000293150 HOVERGEN:HBG000171 OrthoDB:EOG4DBTCW
EMBL:U71293 IPI:IPI00230844 RefSeq:NP_077340.2 UniGene:Rn.41543
ProteinModelPortal:P97609 STRING:P97609 PRIDE:P97609 GeneID:60563
KEGG:rno:60563 UCSC:RGD:620634 InParanoid:P97609 NextBio:612242
Genevestigator:P97609 GermOnline:ENSRNOG00000011427 Uniprot:P97609
Length = 1181
Score = 193 (73.0 bits), Expect = 5.1e-18, Sum P(2) = 5.1e-18
Identities = 45/137 (32%), Positives = 71/137 (51%)
Query: 476 VWDIFRRQDISKLQDYLKKHFREFRHIHCCPVQQVFYLSSEHKAKLKQEYGIEPWTFIQK 535
VW +FR QD +++ +L+ YL S + +L++E+G+ WT +Q
Sbjct: 1045 VWHVFRAQDAQRIRRFLQMVCPAGAGTLEPGAPGSCYLDSGLRRRLREEWGVSCWTLLQA 1104
Query: 536 LGEAVFVPAGCPHQVRNLKSCIKAALDFVSPENVSQCVRLTEEFRLLPPNHRAKEDKLEV 595
GEAV VPAG PHQV+ L S I F+SPE + +L + LPP+HR +++
Sbjct: 1105 PGEAVLVPAGAPHQVQGLVSTISVTQHFLSPETSALSAQLCHQGASLPPDHRMLYAQMD- 1163
Query: 596 KKMILYAVSQAVKDISD 612
+ + AV AV + +
Sbjct: 1164 -RAVFQAVKVAVGTLQE 1179
Score = 114 (45.2 bits), Expect = 5.1e-18, Sum P(2) = 5.1e-18
Identities = 60/201 (29%), Positives = 97/201 (48%)
Query: 172 RHGDLKHFQWHWAKGEPVIVSNVLENALGLSWDPMVMWRACRQISNTKHRLYLDVKAIDC 231
+HG + FQ HW +G+PV+VS + + L LS +W + T L V+ +
Sbjct: 848 KHG-FRLFQEHWRQGQPVLVSGI-QKTLRLS-----LWGM--EALGT---LGGQVQTLTA 895
Query: 232 LDWCEG-EVNIHQFFKGYT--DGRFDKESWPQILKLKDWPPSNLFEERLPRHNVEFLGCL 288
L + ++ F+KG++ + R K +L L P + E R+ N+ L
Sbjct: 896 LGPPQPTSLDSTAFWKGFSHPEAR-PKLDEGSVLLLHR-PLGDKDESRV--ENLA--SSL 949
Query: 289 PFKEYTHPCA--GALNIATKLPKK-SLKPDMGPKTYIAYGVAQELGRADSVTKLHC-DMS 344
P EY CA G LN+A+ LP +L P + P+ + AYGV G TK C ++S
Sbjct: 950 PLPEY---CAHQGKLNLASYLPLGLTLHP-LEPQLWAAYGVNSHRGHLG--TKNLCVEVS 1003
Query: 345 DAVNVLTHTTDVKLKPEHLAK 365
D +++L H + +L P + A+
Sbjct: 1004 DLISILVHA-EAQLPPWYRAQ 1023
>MGI|MGI:96223 [details] [associations]
symbol:Hr "hairless" species:10090 "Mus musculus" [GO:0000118
"histone deacetylase complex" evidence=ISO] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=ISO;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016604 "nuclear body" evidence=IDA] [GO:0042809 "vitamin D
receptor binding" evidence=ISO] [GO:0042826 "histone deacetylase
binding" evidence=ISO] [GO:0043433 "negative regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0046966 "thyroid hormone receptor binding"
evidence=ISO] [GO:0051291 "protein heterooligomerization"
evidence=ISO] InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184
SMART:SM00558 MGI:MGI:96223 GO:GO:0003714 GO:GO:0045892
GO:GO:0051291 GO:GO:0046872 GO:GO:0003677 GO:GO:0006351
GO:GO:0043433 GO:GO:0016604 GO:GO:0000118 CTD:55806
eggNOG:NOG243648 HOGENOM:HOG000293150 HOVERGEN:HBG000171
OrthoDB:EOG4DBTCW EMBL:Z32675 EMBL:BC049182 IPI:IPI00123616
PIR:I48378 RefSeq:NP_068677.2 UniGene:Mm.7598
ProteinModelPortal:Q61645 SMR:Q61645 STRING:Q61645
PhosphoSite:Q61645 PRIDE:Q61645 Ensembl:ENSMUST00000022691
Ensembl:ENSMUST00000161069 GeneID:15460 KEGG:mmu:15460
UCSC:uc007uoj.1 GeneTree:ENSGT00530000063039 InParanoid:Q61645
ChiTaRS:HR NextBio:288274 Bgee:Q61645 CleanEx:MM_HR
Genevestigator:Q61645 GermOnline:ENSMUSG00000022096 Uniprot:Q61645
Length = 1182
Score = 189 (71.6 bits), Expect = 2.5e-17, Sum P(3) = 2.5e-17
Identities = 44/132 (33%), Positives = 69/132 (52%)
Query: 476 VWDIFRRQDISKLQDYLKKHFREFRHIHCCPVQQVFYLSSEHKAKLKQEYGIEPWTFIQK 535
VW +FR QD +++ +L+ YL + + +L++E+G+ WT +Q
Sbjct: 1046 VWHVFRAQDAQRIRRFLQMVCPAGAGTLEPGAPGSCYLDAGLRRRLREEWGVSCWTLLQA 1105
Query: 536 LGEAVFVPAGCPHQVRNLKSCIKAALDFVSPENVSQCVRLTEEFRLLPPNHRAKEDKLEV 595
GEAV VPAG PHQV+ L S I F+SPE + +L + LPP+HR +++
Sbjct: 1106 PGEAVLVPAGAPHQVQGLVSTISVTQHFLSPETSALSAQLYHQGASLPPDHRMLYAQMD- 1164
Query: 596 KKMILYAVSQAV 607
+ + AV AV
Sbjct: 1165 -RAVFQAVKAAV 1175
Score = 90 (36.7 bits), Expect = 2.5e-17, Sum P(3) = 2.5e-17
Identities = 30/82 (36%), Positives = 45/82 (54%)
Query: 288 LPFKEYTHPCA--GALNIATKLPKK-SLKPDMGPKTYIAYGVAQELGRADSVTKLHC-DM 343
LP EY CA G LN+A+ LP +L P + P+ + AYGV G TK C ++
Sbjct: 950 LPLPEY---CAHQGKLNLASYLPLGLTLHP-LEPQLWAAYGVNSHRGHLG--TKNLCVEV 1003
Query: 344 SDAVNVLTHTTDVKLKPEHLAK 365
SD +++L H + +L P + A+
Sbjct: 1004 SDLISILVHA-EAQLPPWYRAQ 1024
Score = 67 (28.6 bits), Expect = 2.5e-17, Sum P(3) = 2.5e-17
Identities = 15/33 (45%), Positives = 21/33 (63%)
Query: 172 RHGDLKHFQWHWAKGEPVIVSNVLENALGLS-W 203
+HG FQ HW +G+PV+VS + + L LS W
Sbjct: 849 KHG-FHLFQEHWRQGQPVLVSGI-QKTLRLSLW 879
>UNIPROTKB|O43593 [details] [associations]
symbol:HR "Protein hairless" species:9606 "Homo sapiens"
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0016604
"nuclear body" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003677 "DNA
binding" evidence=NAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=NAS] [GO:0005634 "nucleus"
evidence=NAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=NAS] InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00558 GO:GO:0005634 GO:GO:0003714
GO:GO:0045892 GO:GO:0051291 GO:GO:0046872 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0043433 GO:GO:0016604
GO:GO:0000118 EMBL:AF039196 EMBL:AJ277249 EMBL:AJ277250
EMBL:AJ277251 EMBL:AJ277252 EMBL:AJ277253 EMBL:AJ400825
EMBL:AJ400826 EMBL:AJ400827 EMBL:AJ400828 EMBL:AJ400829
EMBL:AJ400830 EMBL:AJ400831 EMBL:AJ400832 EMBL:AJ400833
EMBL:AJ400834 EMBL:AJ400835 EMBL:AJ400836 EMBL:AJ400837
EMBL:AJ277165 EMBL:BC067128 IPI:IPI00216544 IPI:IPI00292057
RefSeq:NP_005135.2 RefSeq:NP_060881.2 UniGene:Hs.272367
ProteinModelPortal:O43593 SMR:O43593 IntAct:O43593 MINT:MINT-269712
STRING:O43593 PhosphoSite:O43593 PaxDb:O43593 PRIDE:O43593
Ensembl:ENST00000312841 Ensembl:ENST00000381418 GeneID:55806
KEGG:hsa:55806 UCSC:uc003xas.3 UCSC:uc003xat.3 CTD:55806
GeneCards:GC08M022028 HGNC:HGNC:5172 MIM:146550 MIM:203655
MIM:209500 MIM:602302 neXtProt:NX_O43593 Orphanet:701
Orphanet:86819 Orphanet:444 PharmGKB:PA29443 eggNOG:NOG243648
HOGENOM:HOG000293150 HOVERGEN:HBG000171 InParanoid:O43593
OMA:LERAPFW OrthoDB:EOG4DBTCW PhylomeDB:O43593 GenomeRNAi:55806
NextBio:60959 ArrayExpress:O43593 Bgee:O43593 CleanEx:HS_HR
Genevestigator:O43593 GermOnline:ENSG00000168453 Uniprot:O43593
Length = 1189
Score = 172 (65.6 bits), Expect = 1.3e-16, Sum P(3) = 1.3e-16
Identities = 43/133 (32%), Positives = 68/133 (51%)
Query: 476 VWDIFRRQDISKLQDYLKKHFREFRHIHCCPVQQVFYLSSEHKAKLKQEYGIEPWTFIQK 535
VW +FR QD +++ +L+ YL + + +L++E+G+ WT +Q
Sbjct: 1053 VWHVFRAQDAQRIRRFLQMVCPAGAGALEPGAPGSCYLDAGLRRRLREEWGVSCWTLLQA 1112
Query: 536 LGEAVFVPAGCPHQVRNLKSCIKAALDFVSPENVSQCVRLTEEFRLLPPNHRAKEDKLEV 595
GEAV VPAG PHQV+ L S + F+SPE + +L + LPP+ +++
Sbjct: 1113 PGEAVLVPAGAPHQVQGLVSTVSVTQHFLSPETSALSAQLCHQGPSLPPDCHLLYAQMD- 1171
Query: 596 KKMILYAVSQAVK 608
+AV QAVK
Sbjct: 1172 -----WAVFQAVK 1179
Score = 102 (41.0 bits), Expect = 1.3e-16, Sum P(3) = 1.3e-16
Identities = 40/117 (34%), Positives = 57/117 (48%)
Query: 257 SWPQILKLKDWPPSNLFEERLPRHN---VEFLGC-LPFKEYTHPCA--GALNIATKLPKK 310
SWP++ D L L + VE L LP EY CA G LN+A+ LP
Sbjct: 922 SWPELRPKSDEGSVLLLHRALGDEDTSRVENLAASLPLPEY---CALHGKLNLASYLPPG 978
Query: 311 -SLKPDMGPKTYIAYGVAQELGRADSVTKLHC-DMSDAVNVLTHTTDVKLKPEHLAK 365
+L+P + P+ + AYGV+ G TK C +++D V++L H D L H A+
Sbjct: 979 LALRP-LEPQLWAAYGVSPHRGHLG--TKNLCVEVADLVSILVHA-DTPLPAWHRAQ 1031
Score = 66 (28.3 bits), Expect = 1.3e-16, Sum P(3) = 1.3e-16
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 179 FQWHWAKGEPVIVSNVLENALGLSW 203
FQ HW +G+PV+VS + G W
Sbjct: 862 FQEHWRQGQPVLVSGIQRTLQGNLW 886
>RGD|708458 [details] [associations]
symbol:Jmjd1c "jumonji domain containing 1C" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016702 "oxidoreductase
activity, acting on single donors with incorporation of molecular
oxygen, incorporation of two atoms of oxygen" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] InterPro:IPR003347
Pfam:PF02373 PROSITE:PS51184 RGD:708458 eggNOG:NOG305537
OrthoDB:EOG447FS9 HOGENOM:HOG000113130 EMBL:AF202265
IPI:IPI01016516 UniGene:Rn.99017 ProteinModelPortal:Q9QXL6
STRING:Q9QXL6 UCSC:RGD:708458 Genevestigator:Q9QXL6 Uniprot:Q9QXL6
Length = 122
Score = 208 (78.3 bits), Expect = 6.2e-16, P = 6.2e-16
Identities = 44/104 (42%), Positives = 67/104 (64%)
Query: 506 PVQ-QVFYLSSEHKAKLKQEYGIEPWTFIQKLGEAVFVPAGCPHQVRNLKSCIKAALDFV 564
PV+ Q +Y++ + L +EYG+ T +Q LG+A+ +PAG HQV+N SCI+ DFV
Sbjct: 5 PVRDQGWYVNRRPRQGLLEEYGVRACTLVQFLGDAIVLPAGTLHQVQNFHSCIQVTEDFV 64
Query: 565 SPENVSQCVRLTEEFRLLPPNHRAKEDKLEVKKMILYAVSQAVK 608
SPE++ Q LT+E RLL +DKL+VK ++ +AV + V+
Sbjct: 65 SPEHLVQSFHLTQELRLLKEEINY-DDKLQVKNILYHAVKEMVR 107
>UNIPROTKB|F1MBI2 [details] [associations]
symbol:HR "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016604 "nuclear body"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0016604 OMA:LERAPFW
GeneTree:ENSGT00530000063039 EMBL:DAAA02023404 IPI:IPI00687527
Ensembl:ENSBTAT00000015967 Uniprot:F1MBI2
Length = 1186
Score = 171 (65.3 bits), Expect = 3.4e-15, Sum P(4) = 3.4e-15
Identities = 44/133 (33%), Positives = 68/133 (51%)
Query: 476 VWDIFRRQDISKLQDYLKKHFREFRHIHCCPVQQVFYLSSEHKAKLKQEYGIEPWTFIQK 535
VW +FR QD +++ +L+ YL + + +L++E+G+ WT +Q
Sbjct: 1050 VWHVFRAQDAQRIRRFLQMVCPTGAGNLEPGTPGRCYLDAGLRRRLREEWGVSCWTLLQA 1109
Query: 536 LGEAVFVPAGCPHQVRNLKSCIKAALDFVSPENVSQCVRLTEEFRLLPPNHRAKEDKLEV 595
GEAV VPAG PHQV+ L S + F+SPE + +L + LP HR +++
Sbjct: 1110 PGEAVLVPAGAPHQVQCLVSTVSVTQHFLSPETSALSAQLCHQGPSLPTAHRLLYAQMD- 1168
Query: 596 KKMILYAVSQAVK 608
+AV QAVK
Sbjct: 1169 -----WAVFQAVK 1176
Score = 89 (36.4 bits), Expect = 3.4e-15, Sum P(4) = 3.4e-15
Identities = 29/75 (38%), Positives = 40/75 (53%)
Query: 282 VEFLGC-LPFKEYTHPCA--GALNIATKLPKKSLKPDMGPKTYIAYGVAQELGRADSVTK 338
VE L LP EY CA G LN+A+ LP + + P+ + AYGV+ G TK
Sbjct: 947 VENLAASLPLPEY---CAHHGKLNLASYLPPGPVLRPLEPQLWAAYGVSPHRGHLG--TK 1001
Query: 339 LHC-DMSDAVNVLTH 352
C +++D V+VL H
Sbjct: 1002 NLCVEVTDLVSVLVH 1016
Score = 66 (28.3 bits), Expect = 3.4e-15, Sum P(4) = 3.4e-15
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 179 FQWHWAKGEPVIVSNVLENALGLSW 203
FQ HW +G+PV+VS + G W
Sbjct: 859 FQEHWRQGQPVLVSGIQRTLQGHLW 883
Score = 42 (19.8 bits), Expect = 3.4e-15, Sum P(4) = 3.4e-15
Identities = 16/70 (22%), Positives = 30/70 (42%)
Query: 17 DSKPQKGSRRSASMRDFKVDSTPETDSKFDTTPGTDSKVGSNPE---KDSKGREKPISDW 73
DS P + +A +R K S+PE ++P G P + ++GR++ +
Sbjct: 391 DSCPGEEESPAAQLRARKRSSSPEVQGTA-SSPAAKRPTGPFPGSVGQGARGRQEVLDSL 449
Query: 74 KANENGSILC 83
N+ + C
Sbjct: 450 FGNKAETEQC 459
>UNIPROTKB|F1RMB8 [details] [associations]
symbol:HR "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016604 "nuclear body"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0016604 OMA:LERAPFW
GeneTree:ENSGT00530000063039 EMBL:CT827951
Ensembl:ENSSSCT00000010539 ArrayExpress:F1RMB8 Uniprot:F1RMB8
Length = 1177
Score = 176 (67.0 bits), Expect = 6.7e-15, Sum P(3) = 6.7e-15
Identities = 44/133 (33%), Positives = 69/133 (51%)
Query: 476 VWDIFRRQDISKLQDYLKKHFREFRHIHCCPVQQVFYLSSEHKAKLKQEYGIEPWTFIQK 535
VW +FR QD +++ +L+ YL + + +L++E+G+ WT +Q
Sbjct: 1041 VWHVFRAQDTQRIRRFLQMVCPAGAGNLEPGTPGSCYLDARLRRRLREEWGVSCWTLLQA 1100
Query: 536 LGEAVFVPAGCPHQVRNLKSCIKAALDFVSPENVSQCVRLTEEFRLLPPNHRAKEDKLEV 595
GEAV VPAG PHQV+ L S + F+SPE + +L + LPP+ R +++
Sbjct: 1101 PGEAVLVPAGAPHQVQGLVSTVSITQHFLSPETSALSTQLCHQGPSLPPDCRLLYAQMD- 1159
Query: 596 KKMILYAVSQAVK 608
+AV QAVK
Sbjct: 1160 -----WAVFQAVK 1167
Score = 84 (34.6 bits), Expect = 6.7e-15, Sum P(3) = 6.7e-15
Identities = 33/89 (37%), Positives = 46/89 (51%)
Query: 282 VEFLGC-LPFKEYTHPCA--GALNIATKLPK-KSLKPDMGPKTYIAYGVAQELGRADSVT 337
VE L LP EY CA G LN+A+ LP L+P + P+ + AYGV+ G T
Sbjct: 938 VENLAASLPLPEY---CAHHGKLNLASYLPPGPGLRP-LVPQLWAAYGVSPHCGHLG--T 991
Query: 338 KLHC-DMSDAVNVLTHTTDVKLKPEHLAK 365
K C +++D V+VL + L H A+
Sbjct: 992 KNLCVEVTDLVSVLVRA-EAPLPTWHRAQ 1019
Score = 63 (27.2 bits), Expect = 6.7e-15, Sum P(3) = 6.7e-15
Identities = 10/26 (38%), Positives = 16/26 (61%)
Query: 179 FQWHWAKGEPVIVSNVLENALGLSWD 204
FQ HW +G+PV+VS + + W+
Sbjct: 850 FQEHWRQGQPVLVSGIQKTLQSHLWE 875
>UNIPROTKB|F1PFJ6 [details] [associations]
symbol:HR "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016604 "nuclear
body" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00558 GO:GO:0003714 GO:GO:0045892
GO:GO:0016604 CTD:55806 OMA:LERAPFW GeneTree:ENSGT00530000063039
EMBL:AAEX03014381 RefSeq:XP_543256.3 Ensembl:ENSCAFT00000015345
GeneID:486130 KEGG:cfa:486130 NextBio:20859967 Uniprot:F1PFJ6
Length = 1184
Score = 168 (64.2 bits), Expect = 2.0e-14, Sum P(3) = 2.0e-14
Identities = 42/133 (31%), Positives = 68/133 (51%)
Query: 476 VWDIFRRQDISKLQDYLKKHFREFRHIHCCPVQQVFYLSSEHKAKLKQEYGIEPWTFIQK 535
VW +FR QD +++ +L+ YL + + +L++E+G+ WT +Q
Sbjct: 1048 VWHVFRAQDAQRIRRFLQMVCPAGAGNLEPGTPGCCYLDAGLRRRLREEWGVNCWTLLQA 1107
Query: 536 LGEAVFVPAGCPHQVRNLKSCIKAALDFVSPENVSQCVRLTEEFRLLPPNHRAKEDKLEV 595
GEAV VPAG PHQV+ L + + F+SPE + +L + L P+ R +++
Sbjct: 1108 PGEAVLVPAGAPHQVQGLVNTVSVTQHFLSPETSALSAQLCHQGPSLSPDRRLLYAQMD- 1166
Query: 596 KKMILYAVSQAVK 608
+AV QAVK
Sbjct: 1167 -----WAVFQAVK 1174
Score = 84 (34.6 bits), Expect = 2.0e-14, Sum P(3) = 2.0e-14
Identities = 30/82 (36%), Positives = 44/82 (53%)
Query: 288 LPFKEYTHPCA--GALNIATKLPK-KSLKPDMGPKTYIAYGVAQELGRADSVTKLHC-DM 343
LP EY CA G LN+A+ LP +L+P + P+ + AYGV+ G TK C ++
Sbjct: 952 LPLPEY---CALRGKLNLASYLPPGPALRP-LEPQLWAAYGVSPHRGHLG--TKNLCVEV 1005
Query: 344 SDAVNVLTHTTDVKLKPEHLAK 365
+D V+VL + L H A+
Sbjct: 1006 TDLVSVLVRA-EAPLPAWHRAQ 1026
Score = 67 (28.6 bits), Expect = 2.0e-14, Sum P(3) = 2.0e-14
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 179 FQWHWAKGEPVIVSNVLENALGLSW 203
FQ HW +G+PV+VS + G W
Sbjct: 857 FQEHWRQGQPVLVSGIQRTLQGSLW 881
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.133 0.412 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 624 592 0.00084 120 3 11 22 0.43 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 28
No. of states in DFA: 626 (67 KB)
Total size of DFA: 379 KB (2185 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 52.48u 0.11s 52.59t Elapsed: 00:00:04
Total cpu time: 52.49u 0.11s 52.60t Elapsed: 00:00:04
Start: Sat May 11 04:15:24 2013 End: Sat May 11 04:15:28 2013