BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006943
(624 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|356525090|ref|XP_003531160.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 625
Score = 973 bits (2514), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 472/626 (75%), Positives = 558/626 (89%), Gaps = 3/626 (0%)
Query: 1 MGDSGKRYRSQRDNDRDGKNQKRRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVIN 60
MG++GKRY SQRD+D D K+QKRR+ ++D++GN+E ++YRILCPD VIGSVIGK+GKVIN
Sbjct: 1 MGETGKRYHSQRDHDGDRKHQKRRMTDRDDRGNDELIVYRILCPDEVIGSVIGKNGKVIN 60
Query: 61 SIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHA 120
SIRQETRA+VKVVDPFPG+KDRV+TIY +VK+KEDVE+DDEF KEPLCAAQDALLKVH
Sbjct: 61 SIRQETRAKVKVVDPFPGSKDRVITIYCYVKEKEDVEIDDEFAGKEPLCAAQDALLKVHV 120
Query: 121 AIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDA 180
AIAN++A D++KKRK+++ECQILVPSSQSANIIGKAGATIK+LRSKTR +IKVT KDA
Sbjct: 121 AIANSIAAIGDSEKKRKDRDECQILVPSSQSANIIGKAGATIKKLRSKTRANIKVTAKDA 180
Query: 181 SEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIP 240
++PTHSCAMEFDNFV+I+GESEAVK+ALFA+S+IMYKF PREDI L+T V EAPPSIIIP
Sbjct: 181 ADPTHSCAMEFDNFVVITGESEAVKRALFAVSSIMYKFGPREDISLDTAVPEAPPSIIIP 240
Query: 241 SDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLV 300
SDVP+YPPGGLYP +DPI+ R+VP I+GA VPDLQGYAD GN+WP+YS+ L +VSG V
Sbjct: 241 SDVPVYPPGGLYPASDPIVTPRAVPQIIGATNVPDLQGYADAGNSWPMYSSALPVVSG-V 299
Query: 301 GASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAI 360
GAS+SEEL+IR+LCP +KIGRVIGKGG TIKS+RQASGA I+VDD+K N DEC+I +T
Sbjct: 300 GASRSEELIIRMLCPSDKIGRVIGKGGSTIKSMRQASGAHIEVDDSKANFDECLIIITTT 359
Query: 361 ESPDDIKSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKA 420
ESP D+KSMAVEAVLL+Q KINDEDD TV+IRLLV SKVIGCIIGKSGSIINEIRKRTKA
Sbjct: 360 ESPSDLKSMAVEAVLLMQGKINDEDDTTVSIRLLVPSKVIGCIIGKSGSIINEIRKRTKA 419
Query: 421 DVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADH 480
DVRISKGDKPKCADANDELVEV G V VRDAL+QIILRLRDD L++RD NP +GA+
Sbjct: 420 DVRISKGDKPKCADANDELVEVGGSVDCVRDALIQIILRLRDDVLRERDTGHNPSIGAES 479
Query: 481 IYSSGTGISMPPLLPSIPPV-GPLGYDQRADSGSGIGMLSSSSLY-GYGSLSMGDSPYGS 538
+Y G+S+P ++ S+PPV P+ YD RA+SG+G+GMLS SS Y GYGSL MGD+ YGS
Sbjct: 480 LYPGSAGLSLPSMMHSVPPVAAPMVYDHRAESGAGLGMLSPSSPYGGYGSLPMGDNGYGS 539
Query: 539 MSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGD 598
MSSY++KLYGGLPPP TL++L+PANAVGKV+GK G+N+ANIRKISGA+IE+SD+KS+RGD
Sbjct: 540 MSSYATKLYGGLPPPSTLDMLIPANAVGKVLGKGGANIANIRKISGASIEISDNKSARGD 599
Query: 599 RVALISGTPEQKRAAENLIQAFIMAT 624
R+ALISGTPEQKRAAENLIQAFIMAT
Sbjct: 600 RIALISGTPEQKRAAENLIQAFIMAT 625
>gi|225443912|ref|XP_002278367.1| PREDICTED: KH domain-containing protein At4g18375 [Vitis vinifera]
Length = 623
Score = 927 bits (2395), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 486/624 (77%), Positives = 567/624 (90%), Gaps = 1/624 (0%)
Query: 1 MGDSGKRYRSQRDNDRDGKNQKRRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVIN 60
MG++GKR+RSQRD D D K QKRR+NE+DEKG++E ++YRILCPDGVIGSVIGKSGKVIN
Sbjct: 1 MGETGKRFRSQRDQDGDNKIQKRRVNERDEKGSDELIVYRILCPDGVIGSVIGKSGKVIN 60
Query: 61 SIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHA 120
SIRQ+TRA++KVVDPFPGAKDRV+TIY +VK+KE+VEVDDEFNDK+PLC AQDALLKVHA
Sbjct: 61 SIRQDTRAKIKVVDPFPGAKDRVITIYCYVKEKEEVEVDDEFNDKQPLCPAQDALLKVHA 120
Query: 121 AIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDA 180
AI NAVA+ ++DKK+K+KEECQILVPSSQSAN+IGKAGATIKRLRSKTR +IK+T KD+
Sbjct: 121 AIVNAVASLENSDKKKKDKEECQILVPSSQSANVIGKAGATIKRLRSKTRANIKITAKDS 180
Query: 181 SEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIP 240
++P+HSCAMEFDNFVLI+G+SEAVKKALFAISAIMYKF+PRE+IPL+TTV EAPPSIIIP
Sbjct: 181 TDPSHSCAMEFDNFVLIAGDSEAVKKALFAISAIMYKFTPREEIPLDTTVPEAPPSIIIP 240
Query: 241 SDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLV 300
SDVPIYP GG YP+AD I+ +RSVP +L A VP+LQGY+D G+TWPVYS+ L +VSG
Sbjct: 241 SDVPIYPAGGFYPSADSIVSARSVPPVLAATHVPELQGYSDMGSTWPVYSSNLPVVSGY- 299
Query: 301 GASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAI 360
GAS+SEEL+IRVLCPF+KIGRVIG+GG +IKS+R+ASGA ++VDDTK +RDEC+ITVT+
Sbjct: 300 GASRSEELIIRVLCPFDKIGRVIGRGGSSIKSVREASGAHVEVDDTKADRDECLITVTST 359
Query: 361 ESPDDIKSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKA 420
ES DD+KSMAVEAVLLLQ KINDEDDDTV IRLLV SK+IGCIIGKSGSIINEIRKRT+A
Sbjct: 360 ESVDDLKSMAVEAVLLLQAKINDEDDDTVAIRLLVPSKIIGCIIGKSGSIINEIRKRTRA 419
Query: 421 DVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADH 480
DVRISK ++PKCADANDEL+EVVGEVGSVRDALVQI+LRLRDDALKDRD N G D
Sbjct: 420 DVRISKSERPKCADANDELIEVVGEVGSVRDALVQIVLRLRDDALKDRDTGHNTSAGTDS 479
Query: 481 IYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMS 540
+YS G G+S+ +LPS PPV PL YDQRA++GSG+G+LSSSSLYGYGSLS+G++ YGSMS
Sbjct: 480 LYSGGAGLSVSSVLPSAPPVAPLSYDQRAETGSGLGLLSSSSLYGYGSLSVGENAYGSMS 539
Query: 541 SYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRV 600
SYSSKLYGGLP P T ++++PANAVGKV+GK G+N+ANIRKISGA IE+SDSKSSRGDRV
Sbjct: 540 SYSSKLYGGLPTPSTFDMVIPANAVGKVMGKGGANIANIRKISGAVIEISDSKSSRGDRV 599
Query: 601 ALISGTPEQKRAAENLIQAFIMAT 624
ALISGTPEQKR AENLIQAFIMAT
Sbjct: 600 ALISGTPEQKRTAENLIQAFIMAT 623
>gi|147818880|emb|CAN73780.1| hypothetical protein VITISV_042181 [Vitis vinifera]
Length = 637
Score = 917 bits (2369), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 485/638 (76%), Positives = 566/638 (88%), Gaps = 15/638 (2%)
Query: 1 MGDSGKRYRSQRDNDRDGKNQKRRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVIN 60
MG++GKR+RSQRD D D K QKRR+NE+DEKG++E ++YRILCPDGVIGSVIGKSGKVIN
Sbjct: 1 MGETGKRFRSQRDQDGDNKIQKRRVNERDEKGSDELIVYRILCPDGVIGSVIGKSGKVIN 60
Query: 61 SIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHA 120
SIRQ+TRA++KVVDPFPGAKDRV+TIY +VK+KE+VEVDDEFNDK+PLC AQDALLKVHA
Sbjct: 61 SIRQDTRAKIKVVDPFPGAKDRVITIYCYVKEKEEVEVDDEFNDKQPLCPAQDALLKVHA 120
Query: 121 AIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDA 180
AI NAVA+ ++DKK+K+KEECQILVPSSQSAN+IGKAGATIKRLRSKTR +IK+T KD+
Sbjct: 121 AIVNAVASLENSDKKKKDKEECQILVPSSQSANVIGKAGATIKRLRSKTRANIKITAKDS 180
Query: 181 SEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIP 240
++P+HSCAMEFDNFVLI+G+SEAVKKALFAISAIMYKF+PRE+IPL+TTV EAPPSIIIP
Sbjct: 181 TDPSHSCAMEFDNFVLIAGDSEAVKKALFAISAIMYKFTPREEIPLDTTVPEAPPSIIIP 240
Query: 241 SDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLV 300
SDVPIYP GG YP+AD I+ +RSVP +L A VP+LQGY+D G+TWPVYS+ L +VSG
Sbjct: 241 SDVPIYPAGGFYPSADSIVSARSVPPVLAATHVPELQGYSDMGSTWPVYSSNLPVVSGY- 299
Query: 301 GASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAI 360
GAS+SEEL+IRVLCPF+KIGRVIG+GG +IKS+R+ASGA ++VDDTK +RDEC+ITVT+
Sbjct: 300 GASRSEELIIRVLCPFDKIGRVIGRGGSSIKSVREASGAHVEVDDTKADRDECLITVTST 359
Query: 361 ESPDDIKSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKA 420
ES DD+KSMAVEAVLLLQ KINDEDDDTV IRLLV SK+IGCIIGKSGSIINEIRKRT+A
Sbjct: 360 ESVDDLKSMAVEAVLLLQAKINDEDDDTVAIRLLVPSKIIGCIIGKSGSIINEIRKRTRA 419
Query: 421 DVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADH 480
DVRISK ++PKCADANDEL+EVVGEVGSVRDALVQI+LRLRDDALKDRD N G D
Sbjct: 420 DVRISKSERPKCADANDELIEVVGEVGSVRDALVQIVLRLRDDALKDRDTGHNTSAGTDS 479
Query: 481 IYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSL----------- 529
+YS G G+S+ +LPS PPV PL YDQRA++GSG+G+LSSSSLYGYGSL
Sbjct: 480 LYSGGAGLSVSSVLPSAPPVAPLSYDQRAETGSGLGLLSSSSLYGYGSLSLFFAVKVVVV 539
Query: 530 ---SMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGAT 586
+G++ YGSMSSYSSKLYGGLP P T ++++PANAVGKV+GK G+N+ANIRKISGA
Sbjct: 540 FNGEVGENAYGSMSSYSSKLYGGLPTPSTFDMVIPANAVGKVMGKGGANIANIRKISGAV 599
Query: 587 IEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFIMAT 624
IE+SDSKSSRGDRVALISGTPEQKR AENLIQAFIMAT
Sbjct: 600 IEISDSKSSRGDRVALISGTPEQKRTAENLIQAFIMAT 637
>gi|224076902|ref|XP_002305041.1| predicted protein [Populus trichocarpa]
gi|222848005|gb|EEE85552.1| predicted protein [Populus trichocarpa]
Length = 623
Score = 884 bits (2284), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/627 (73%), Positives = 537/627 (85%), Gaps = 7/627 (1%)
Query: 1 MGDSGKRYRSQRDNDRDGKNQKRRINEKDEKG--NEESVIYRILCPDGVIGSVIGKSGKV 58
M +SGKR R QRD D D NQKR KD KG N+E V+YRILCPD VIGSVIGKSGKV
Sbjct: 1 MVESGKRSRPQRDYDGDTNNQKR---HKDNKGTDNDELVVYRILCPDEVIGSVIGKSGKV 57
Query: 59 INSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKV 118
INSIR E+RARVKVVDPFPGA RV+TIY +VK+K D +VDD+F+ +PLC AQDALLKV
Sbjct: 58 INSIRNESRARVKVVDPFPGAMYRVITIYCNVKEKGDADVDDDFHQADPLCPAQDALLKV 117
Query: 119 HAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPK 178
HAAI+NAVA D+DK+ ++K+ECQILVP+SQSANIIGKAGATIK+LRSKTR +IK+T K
Sbjct: 118 HAAISNAVAALGDSDKRCRDKKECQILVPTSQSANIIGKAGATIKKLRSKTRANIKITAK 177
Query: 179 DASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSII 238
DAS+PTHSCAM+FDNF+LI+GESEAVKKALFA+SAIMYKFSP+E+IPLETTV EAPPSII
Sbjct: 178 DASDPTHSCAMDFDNFLLITGESEAVKKALFAVSAIMYKFSPKEEIPLETTVPEAPPSII 237
Query: 239 IPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSG 298
I SDVPIY PGG YPNADPI+ SRSVP ILGA +P+ QGY D ++WP+YS+ + +V
Sbjct: 238 ISSDVPIYQPGGFYPNADPIVSSRSVPPILGATHIPEFQGYGDMRSSWPIYSSTVPVVPS 297
Query: 299 LVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
S+S EL+IR+LCPF+KIGRVIGKGG TIKSIRQ SGA+I+VDDTK +RDEC+ITV
Sbjct: 298 FGNTSRS-ELIIRLLCPFDKIGRVIGKGGSTIKSIRQVSGARIEVDDTKADRDECIITVI 356
Query: 359 AIESPDDIKSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRT 418
A ESPDD+KSMAVEA+LLLQ KINDED+D V IR LV SKVIGCIIGKSG+I+NEIRKRT
Sbjct: 357 ATESPDDLKSMAVEAILLLQGKINDEDNDIVGIRFLVPSKVIGCIIGKSGAIVNEIRKRT 416
Query: 419 KADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGA 478
ADV ISK DK KCAD+NDELVEV GEVGSVRDALVQI+LRLRDD LK++DG N VG
Sbjct: 417 NADVCISKVDKLKCADSNDELVEVAGEVGSVRDALVQIVLRLRDDVLKEKDGGLNSSVGT 476
Query: 479 DHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGS 538
D +Y GIS+P +LPS+PPV P+GYDQRA+SGSG+G+ SSSSLYGYGSL MG++ YGS
Sbjct: 477 DSVYPVHAGISIPSILPSVPPVAPMGYDQRAESGSGLGLFSSSSLYGYGSLPMGENSYGS 536
Query: 539 MSSYS-SKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRG 597
++SYS SKLY GLPPP TLE+LVPANAVGKVIGK G+N+ANIRKISGA IE+SD+KS+RG
Sbjct: 537 LASYSLSKLYEGLPPPSTLEMLVPANAVGKVIGKGGANIANIRKISGAMIEISDAKSARG 596
Query: 598 DRVALISGTPEQKRAAENLIQAFIMAT 624
DR+A ISG PEQK+AAENLIQAFIMAT
Sbjct: 597 DRIAYISGKPEQKQAAENLIQAFIMAT 623
>gi|357447239|ref|XP_003593895.1| Heterogeneous nuclear ribonucleoprotein K [Medicago truncatula]
gi|357447243|ref|XP_003593897.1| Heterogeneous nuclear ribonucleoprotein K [Medicago truncatula]
gi|355482943|gb|AES64146.1| Heterogeneous nuclear ribonucleoprotein K [Medicago truncatula]
gi|355482945|gb|AES64148.1| Heterogeneous nuclear ribonucleoprotein K [Medicago truncatula]
Length = 631
Score = 869 bits (2245), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/633 (69%), Positives = 538/633 (84%), Gaps = 11/633 (1%)
Query: 1 MGDSGKRYRSQRDNDR-----DGKNQKRRINEKDEKGNEESVIYRILCPDGVIGSVIGKS 55
MG++GKR R QRD DR D KNQKRR+N++DE+ E + YRILCP+ VIGSVIGK+
Sbjct: 1 MGENGKRNRQQRDGDRGGRNWDNKNQKRRVNDRDERDKGELIAYRILCPNEVIGSVIGKN 60
Query: 56 GKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDAL 115
GKVINSIRQE+RA+VKVVDPFPGAK RV+TI+ HVK+KE++E++DEF++++PLCAAQDAL
Sbjct: 61 GKVINSIRQESRAKVKVVDPFPGAKHRVITIFCHVKNKEEIEIEDEFDNEKPLCAAQDAL 120
Query: 116 LKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKV 175
+KVH+AI+N++ A D++KKRK K+ECQILVPSSQSA +IGKAGATIK+LR KTRT+IKV
Sbjct: 121 IKVHSAISNSIETAGDSEKKRKNKDECQILVPSSQSAILIGKAGATIKQLRVKTRTNIKV 180
Query: 176 TPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPP 235
PKDA++P HSCAMEFDNFVL+ GESEAVK+ALFA+S IMYKFSP+EDIPL+TTV E P
Sbjct: 181 VPKDAADPEHSCAMEFDNFVLV-GESEAVKRALFAVSTIMYKFSPKEDIPLDTTVPETPH 239
Query: 236 SIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQ-GYADTGNTWPVYSTGLS 294
SIIIPS++PIYPPGGLYP +DPI+ RS P ++GA + DL GYADTGNTWP+YS+ L
Sbjct: 240 SIIIPSELPIYPPGGLYPASDPIVQPRSFPQLIGATTMQDLHGGYADTGNTWPLYSSPLP 299
Query: 295 LVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECV 354
+VS L GASQSEEL++R+LCP +KIG++IGKGGGTIK +RQASGA+I+VDD+K DEC+
Sbjct: 300 VVSSL-GASQSEELIVRMLCPSDKIGQLIGKGGGTIKRMRQASGARIEVDDSKARHDECL 358
Query: 355 ITVTAIESPDDIKSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEI 414
IT+TA ES D+KS+AVEAVLLLQ KINDEDD V+IRLLV SKVIGCIIG+SG+IINEI
Sbjct: 359 ITITATESTSDLKSVAVEAVLLLQEKINDEDDAPVSIRLLVPSKVIGCIIGRSGAIINEI 418
Query: 415 RKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNP 474
RKRTKAD++IS+ +KPK AD NDELVEVVGEV VRDAL+QI+LRLR+D LK++D N
Sbjct: 419 RKRTKADIQISRSNKPKYADDNDELVEVVGEVDCVRDALIQIVLRLREDVLKNKDIDHNR 478
Query: 475 PVGADHIYSSGTGISMPPLLPSIPPVGP-LGYDQRADSGSGIGMLSSSSLYGYGSLSMGD 533
+G++ +Y+S + +S PP+L SIP P L YDQR SG+G+GM SS S YGY S SM D
Sbjct: 479 HIGSESLYASSSVLSAPPMLSSIPATAPALAYDQRTGSGTGLGMHSSRSHYGYDSYSMED 538
Query: 534 SPYGSMSSYSSKLYGG--LPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSD 591
+ YGSMSSY++ LY G LPP TLE++VPANAVGKV+GK G+NLANIRKISGAT+E+S+
Sbjct: 539 NGYGSMSSYATNLYEGHRLPPLSTLEMVVPANAVGKVMGKGGANLANIRKISGATVEISE 598
Query: 592 SKSSRGDRVALISGTPEQKRAAENLIQAFIMAT 624
SKS RGDRVALISGT E+KRAAENLIQAFIMAT
Sbjct: 599 SKSYRGDRVALISGTSEEKRAAENLIQAFIMAT 631
>gi|449433573|ref|XP_004134572.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 625
Score = 857 bits (2214), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/623 (72%), Positives = 538/623 (86%), Gaps = 2/623 (0%)
Query: 4 SGKRYRSQRDNDRDGKNQKRRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIR 63
SGKR QRD + D K KRRI E+D+ ++E V+YRILCPD VIGSVIGKSGKVINSIR
Sbjct: 3 SGKRPYGQRDYNGDNKGYKRRITEQDDWVSDELVVYRILCPDEVIGSVIGKSGKVINSIR 62
Query: 64 QETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIA 123
QETRA++KVVDPFPGAKDRV+TI+ VKDKEDVEVDDEFND++ LCAAQDALLKVHAAIA
Sbjct: 63 QETRAKIKVVDPFPGAKDRVITIFCFVKDKEDVEVDDEFNDRQTLCAAQDALLKVHAAIA 122
Query: 124 NAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEP 183
NA+A+A D D+K+++KE+CQIL+PSSQSAN+IGKAG+TIK+LRSKTRTSIK++PKDA++P
Sbjct: 123 NALASAGDLDRKQRDKEQCQILIPSSQSANVIGKAGSTIKKLRSKTRTSIKISPKDATDP 182
Query: 184 THSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDV 243
HSCAM+FDNF +I+GE E V++ALFAIS+IMYKF PRE+IPL+T V EAPP+IIIPSDV
Sbjct: 183 IHSCAMDFDNFAVIAGEPEGVRRALFAISSIMYKFPPREEIPLDTNVNEAPPNIIIPSDV 242
Query: 244 PIYPPGGLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLV-SGLVGA 302
P+Y GGLYP+ADPILP RS+P +LGA V DL Y ++GN WP+YS+ L +V G+ G
Sbjct: 243 PLYSAGGLYPSADPILPPRSIPPMLGAQHVQDLHDYPESGNAWPLYSSSLPVVPGGISGH 302
Query: 303 SQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIES 362
SEELV+RVLCPF+ IGRVIGKGGGTIKSIRQASGA+++VDDTK + DEC+IT+++ ES
Sbjct: 303 PPSEELVVRVLCPFDNIGRVIGKGGGTIKSIRQASGARVEVDDTKRDCDECIITISSFES 362
Query: 363 PDDIKSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADV 422
DD+KSMAVE VLLLQ KIND++ TV +RLL+ SKVIGCIIGKSGSIINEIRK T+AD+
Sbjct: 363 LDDLKSMAVETVLLLQEKINDDEGGTVIMRLLIPSKVIGCIIGKSGSIINEIRKSTRADI 422
Query: 423 RISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIY 482
RISKGDK KCA ++DELVEV G+VG VRDALVQI+LRLRDDALK+RD N + D +Y
Sbjct: 423 RISKGDKLKCASSSDELVEVTGKVGCVRDALVQIVLRLRDDALKERDVGHNSAIVTDSMY 482
Query: 483 SSGTGISMPPLLPSIPP-VGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSS 541
SSG+ SMP +LPS+ P P+GYDQRA+SGSG+G+LSSS LYG GSLSMGD+ YG MSS
Sbjct: 483 SSGSSFSMPSVLPSVSPGAPPMGYDQRAESGSGLGVLSSSGLYGSGSLSMGDNGYGYMSS 542
Query: 542 YSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVA 601
YSSKLYGGLPPP +LE+L+PANA GKVIGK G+N+ANIRKISGA IE+SDSKSSRGDR+A
Sbjct: 543 YSSKLYGGLPPPSSLEMLIPANAAGKVIGKGGANIANIRKISGALIEISDSKSSRGDRIA 602
Query: 602 LISGTPEQKRAAENLIQAFIMAT 624
LISGT EQKR AENLIQAFIMAT
Sbjct: 603 LISGTSEQKRTAENLIQAFIMAT 625
>gi|297791069|ref|XP_002863419.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297309254|gb|EFH39678.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 643
Score = 716 bits (1848), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/616 (62%), Positives = 486/616 (78%), Gaps = 23/616 (3%)
Query: 27 EKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTI 86
EK + ++ V+YRILCP GV+GSVIGKSGKVIN IRQETRAR+KVVDPFPG +RV+TI
Sbjct: 33 EKTDNKDDLVVVYRILCPSGVMGSVIGKSGKVINLIRQETRARIKVVDPFPGCSERVITI 92
Query: 87 YSHVKDKEDVEVD---DEFNDKEPLCAAQDALLKVHAAIANAVANATDNDK-KRKEKEEC 142
+ V +K+D+ +D E N PLC+AQDALLKVH AI ++A A +N K R + EC
Sbjct: 93 FCSVTEKKDI-IDIEHSELNYSIPLCSAQDALLKVHDAIVASLATAAENTKIDRDDIREC 151
Query: 143 QILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESE 202
++LVPSSQ +N+IGK+G+ IK++RS+TR ++KV KD S+P+H+CAM+FDN VLISGESE
Sbjct: 152 RLLVPSSQCSNVIGKSGSIIKKIRSRTRANVKVVSKDVSDPSHTCAMDFDNIVLISGESE 211
Query: 203 AVKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPS- 261
+VKKALFA+SAIMYK SPRE IPL+TTV+E P SIIIPSD+ IYP GGLYPN DPI
Sbjct: 212 SVKKALFAVSAIMYKVSPREQIPLDTTVQEVPASIIIPSDLSIYPQGGLYPNQDPIFQHG 271
Query: 262 RSVPSILGAARVPDLQGYADT-GNTWPVYS-TGLSLVSGLVGASQSEELVIRVLCPFNKI 319
+V S +G +P QGY ++ N PV+S + L +V G G+S+SE+LVI+V+C +KI
Sbjct: 272 ANVSSFIGT--LP--QGYGESAANPMPVFSASALPVVHGFGGSSKSEKLVIKVICSSSKI 327
Query: 320 GRVIGKGGGTIKSIRQASGAQIDVDDTKDNR-DECVITVTAIESPDDIKSMAVEAVLLLQ 378
GRVIGKGG TIK IRQASG+ I+V+D++ N D+CVITVTA ESPDD+KSMAVEAVLLLQ
Sbjct: 328 GRVIGKGGSTIKGIRQASGSHIEVNDSRANHDDDCVITVTATESPDDLKSMAVEAVLLLQ 387
Query: 379 TKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKG-DKPKCADAND 437
KINDED++ V ++LLV SKVIGCIIGKSGSII+EIRKRTKA++ ISKG +KPKCAD ND
Sbjct: 388 EKINDEDEEKVKMQLLVPSKVIGCIIGKSGSIISEIRKRTKANIHISKGNNKPKCADPND 447
Query: 438 ELVEVVGEVGSVRDALVQIILRLRDDALKDRD-GSRN-PPVGAD--HIYSSG---TGISM 490
ELVE+ GEV VRDAL+QI+LRLRDD L+DR+ GSRN PP ++ + +SSG TG+++
Sbjct: 448 ELVEISGEVSDVRDALIQIVLRLRDDVLRDREIGSRNQPPARSENNNFFSSGSSNTGLAL 507
Query: 491 P-PLLPSIPPVGPLGYDQRADSGSGIGML-SSSSLYGYGSLSMGDSPYGSMSSYSSKLYG 548
P + S+P V + +D+R ++GS + ML SS LYGYGS +G++ YGS SSYSS LYG
Sbjct: 508 PSSFMSSVPQVASVDFDRRPETGSSMSMLPSSGGLYGYGSFPVGNNSYGSKSSYSSNLYG 567
Query: 549 GLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPE 608
GLP T+EV +PANAVGKV+G+ G NL NIR+ISGA IE+SDSK+S G R+ALISGTPE
Sbjct: 568 GLPQSTTMEVRIPANAVGKVMGRGGGNLDNIRRISGAMIEISDSKNSHGGRIALISGTPE 627
Query: 609 QKRAAENLIQAFIMAT 624
QKR AENL QAFIM+T
Sbjct: 628 QKRTAENLFQAFIMST 643
>gi|449525363|ref|XP_004169687.1| PREDICTED: KH domain-containing protein At4g18375-like, partial
[Cucumis sativus]
Length = 531
Score = 704 bits (1818), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/516 (70%), Positives = 441/516 (85%), Gaps = 2/516 (0%)
Query: 4 SGKRYRSQRDNDRDGKNQKRRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIR 63
SGKR QRD + D K KRRI E+D+ ++E V+YRILCPD VIGSVIGKSGKVINSIR
Sbjct: 3 SGKRPYGQRDYNGDNKGYKRRITEQDDWVSDELVVYRILCPDEVIGSVIGKSGKVINSIR 62
Query: 64 QETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIA 123
QETRA++KVVDPFPGAKDRV+TI+ VKDKEDVEVDDEFND++ LCAAQDALLKVHAAIA
Sbjct: 63 QETRAKIKVVDPFPGAKDRVITIFCFVKDKEDVEVDDEFNDRQTLCAAQDALLKVHAAIA 122
Query: 124 NAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEP 183
NA+A+A D D+K+++KE+CQIL+PSSQSAN+IGKAG+TIK+LRSKTRTSIK++PKDA++P
Sbjct: 123 NALASAGDLDRKQRDKEQCQILIPSSQSANVIGKAGSTIKKLRSKTRTSIKISPKDATDP 182
Query: 184 THSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDV 243
HSCAM+FDNF +I+GE E V++ALFAIS+IMYKF PRE+IPL+T V EAPP+IIIPSDV
Sbjct: 183 IHSCAMDFDNFAVIAGEPEGVRRALFAISSIMYKFPPREEIPLDTNVNEAPPNIIIPSDV 242
Query: 244 PIYPPGGLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLV-SGLVGA 302
P+Y GGLYP+ADPILP RS+P +LGA V DL Y ++GN WP+YS+ L +V G+ G
Sbjct: 243 PLYSAGGLYPSADPILPPRSIPPMLGAQHVQDLHDYPESGNAWPLYSSSLPVVPGGISGH 302
Query: 303 SQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIES 362
SEELV+RVLCPF+ IGRVIGKGGGTIKSIRQASGA+++VDDTK + DEC+IT+++ ES
Sbjct: 303 PPSEELVVRVLCPFDNIGRVIGKGGGTIKSIRQASGARVEVDDTKRDCDECIITISSFES 362
Query: 363 PDDIKSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADV 422
DD+KSMAVE VLLLQ KIND++ TV +RLL+ SKVIGCIIGKSGSIINEIRK T+AD+
Sbjct: 363 LDDLKSMAVETVLLLQEKINDDEGGTVIMRLLIPSKVIGCIIGKSGSIINEIRKSTRADI 422
Query: 423 RISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIY 482
RISKGDK KCA ++DELVEV G+VG VRDALVQI+LRLRDDALK+RD N + D +Y
Sbjct: 423 RISKGDKLKCASSSDELVEVTGKVGCVRDALVQIVLRLRDDALKERDVGHNSAIVTDSMY 482
Query: 483 SSGTGISMPPLLPSIPP-VGPLGYDQRADSGSGIGM 517
SSG+ SMP +LPS+ P P+GYDQRA+SGSG+G+
Sbjct: 483 SSGSSFSMPSVLPSVSPGAPPMGYDQRAESGSGLGV 518
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 102/347 (29%), Positives = 156/347 (44%), Gaps = 67/347 (19%)
Query: 305 SEELVI-RVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAI--- 360
S+ELV+ R+LCP IG VIGK G I SIRQ + A+I V D + VIT+
Sbjct: 32 SDELVVYRILCPDEVIGSVIGKSGKVINSIRQETRAKIKVVDPFPGAKDRVITIFCFVKD 91
Query: 361 -------ESPDDIKSMAVEAVLLLQTK------------INDEDDDTVTIRLLVSSKVIG 401
+ +D +++ LL+ ++ + D ++L+ S
Sbjct: 92 KEDVEVDDEFNDRQTLCAAQDALLKVHAAIANALASAGDLDRKQRDKEQCQILIPSSQSA 151
Query: 402 CIIGKSGSIINEIRKRTKADVRISKGDKP----KCADANDELVEVVGEVGSVRDALV--- 454
+IGK+GS I ++R +T+ ++IS D CA D + GE VR AL
Sbjct: 152 NVIGKAGSTIKKLRSKTRTSIKISPKDATDPIHSCAMDFDNFAVIAGEPEGVRRALFAIS 211
Query: 455 QIILRL--RDDALKDRDGSRNPP---VGADHIYSSGTGI--SMPPLLP--SIPPVGPLGY 505
I+ + R++ D + + PP + +D S G+ S P+LP SIPP+ LG
Sbjct: 212 SIMYKFPPREEIPLDTNVNEAPPNIIIPSDVPLYSAGGLYPSADPILPPRSIPPM--LGA 269
Query: 506 DQRAD------SGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPP--PLTLE 557
D SG+ + SSS G +S G PP L +
Sbjct: 270 QHVQDLHDYPESGNAWPLYSSSLPVVPGGIS------------------GHPPSEELVVR 311
Query: 558 VLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALIS 604
VL P + +G+VIGK G + +IR+ SGA +E+ D+K + + IS
Sbjct: 312 VLCPFDNIGRVIGKGGGTIKSIRQASGARVEVDDTKRDCDECIITIS 358
>gi|15237393|ref|NP_199431.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|9757739|dbj|BAB08264.1| unnamed protein product [Arabidopsis thaliana]
gi|14532588|gb|AAK64022.1| unknown protein [Arabidopsis thaliana]
gi|21280941|gb|AAM44907.1| unknown protein [Arabidopsis thaliana]
gi|332007968|gb|AED95351.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 644
Score = 690 bits (1780), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/624 (60%), Positives = 484/624 (77%), Gaps = 27/624 (4%)
Query: 19 KNQKRRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPG 78
++++++I+ KD+ V+YRILCP GV+GSVIGKSGKVIN IRQETRAR+KVVDPFPG
Sbjct: 30 ESEEKKIDNKDDL----VVVYRILCPSGVMGSVIGKSGKVINLIRQETRARIKVVDPFPG 85
Query: 79 AKDRVVTIYSHVKDKEDVEVDDEFNDKE---PLCAAQDALLKVHAAIANAVANATDNDK- 134
+RV+TI+ V +K+D+ VD E+++ + PLC+AQ ALLKVH AI ++A A +N K
Sbjct: 86 CSERVITIFCSVSEKKDI-VDIEYSELDYSVPLCSAQAALLKVHDAIVASLATAAENTKI 144
Query: 135 KRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNF 194
R + EC++LVPSSQ + +IGK+G+ IK +R +TR ++KV KD S+P+H+CAM+FDN
Sbjct: 145 DRDDFRECRLLVPSSQCSIVIGKSGSIIKNIRGRTRANVKVVSKDVSDPSHTCAMDFDNI 204
Query: 195 VLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPN 254
V+ISGE+E+VKKALFA+SAIMYK SPRE IPL+TTV+E P SIIIPSD+ IYP GLYP+
Sbjct: 205 VMISGETESVKKALFAVSAIMYKVSPREQIPLDTTVQEVPASIIIPSDLSIYPQAGLYPS 264
Query: 255 ADPILPS-RSVPSILGAARVPDLQGYADT-GNTWPVYS-TGLSLVSGLVGASQSEELVIR 311
D I +V S +G +P QGY + N PV+S + L +V G G+S+SE+L I+
Sbjct: 265 QDSIFQHGANVSSFIGT--LP--QGYGENAANPVPVFSASALPVVHGFGGSSRSEKLAIK 320
Query: 312 VLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNR-DECVITVTAIESPDDIKSMA 370
V+C +KIGRVIGKGG TIK IRQASG+ I+V+D++ N D+CVITVTA ESPDD+KSMA
Sbjct: 321 VICSSSKIGRVIGKGGLTIKGIRQASGSHIEVNDSRTNHDDDCVITVTATESPDDLKSMA 380
Query: 371 VEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDK- 429
VEAVLLLQ KINDED+D V ++LLVSSKVIGCIIGKSGSII+EIRKRTKAD+ ISKG+
Sbjct: 381 VEAVLLLQEKINDEDEDKVKMQLLVSSKVIGCIIGKSGSIISEIRKRTKADIHISKGNNT 440
Query: 430 PKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRD-GSRN-PPVGAD-----HIY 482
PKCAD NDELVE+ GEV +VRDAL+QI+LRLRDD L+DR+ GSRN PP ++
Sbjct: 441 PKCADPNDELVEISGEVSNVRDALIQIVLRLRDDVLRDRETGSRNQPPARSENNNFFSSS 500
Query: 483 SSGTGISMP-PLLPSIPPVGPLGYDQRADSGSGIGML-SSSSLYGYGSLSMGDSPYGSMS 540
SS TG+++P + S+P V + +++R ++GS + ML SS +YGYGS +G++ YGS S
Sbjct: 501 SSNTGLALPQSFMSSVPQVASVDFNRRPETGSSMSMLPSSGGIYGYGSFPVGNTSYGSNS 560
Query: 541 SYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRV 600
SYSS LYGGLP T+EV +PANAVGKV+G+ G NL NIR+ISGA IE+SDSK+S G RV
Sbjct: 561 SYSSNLYGGLPQSTTMEVRIPANAVGKVMGRGGGNLDNIRRISGAMIEISDSKNSHGGRV 620
Query: 601 ALISGTPEQKRAAENLIQAFIMAT 624
ALISGT EQKR AENL QAFIM+T
Sbjct: 621 ALISGTSEQKRTAENLFQAFIMST 644
>gi|21553916|gb|AAM62999.1| unknown [Arabidopsis thaliana]
Length = 644
Score = 689 bits (1778), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/624 (60%), Positives = 484/624 (77%), Gaps = 27/624 (4%)
Query: 19 KNQKRRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPG 78
++++++I+ KD+ V+YRILCP GV+GSVIGKSGKVIN IRQETRAR+KVVDPFPG
Sbjct: 30 ESEEKKIDNKDDL----VVVYRILCPSGVMGSVIGKSGKVINLIRQETRARIKVVDPFPG 85
Query: 79 AKDRVVTIYSHVKDKEDVEVDDEFNDKE---PLCAAQDALLKVHAAIANAVANATDNDK- 134
+RV+TI+ V +K+D+ VD E+++ + PLC+AQ ALLKVH AI ++A A +N K
Sbjct: 86 CSERVITIFCSVSEKKDI-VDIEYSELDYSVPLCSAQAALLKVHDAIVASLATAAENTKI 144
Query: 135 KRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNF 194
R + EC++LVPSSQ + +IGK+G+ IK +R +TR ++KV KDAS+P+H+CAM+FDN
Sbjct: 145 DRDDFRECRLLVPSSQCSIVIGKSGSIIKNIRGRTRANVKVVSKDASDPSHTCAMDFDNI 204
Query: 195 VLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPN 254
V+ISGE+E+VKKALFA+SAIMYK SPRE IPL+TTV+E P SIIIPSD+ IYP GLYP+
Sbjct: 205 VMISGETESVKKALFAVSAIMYKVSPREQIPLDTTVQEVPASIIIPSDLSIYPQAGLYPS 264
Query: 255 ADPILPS-RSVPSILGAARVPDLQGYADT-GNTWPVYS-TGLSLVSGLVGASQSEELVIR 311
D I +V S +G +P QGY + N PV+S + L +V G G+S+SE+L I+
Sbjct: 265 QDSIFQHGANVSSFIGT--LP--QGYGENAANPLPVFSASALPVVHGFGGSSRSEKLAIK 320
Query: 312 VLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNR-DECVITVTAIESPDDIKSMA 370
V+C +KIGRVIGKGG TIK IRQASG+ I+V+D++ N D+CVITVTA ESPDD+KSMA
Sbjct: 321 VICASSKIGRVIGKGGLTIKGIRQASGSHIEVNDSRTNHDDDCVITVTATESPDDLKSMA 380
Query: 371 VEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDK- 429
VEAVLLLQ KINDED+D V ++LLVSSKVIGCIIGKSGSII+EIRKRTKAD+ ISKG+
Sbjct: 381 VEAVLLLQEKINDEDEDKVKMQLLVSSKVIGCIIGKSGSIISEIRKRTKADIHISKGNNT 440
Query: 430 PKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRD-GSRN-PPVGAD-----HIY 482
PK AD NDELVE+ GEV +VRDAL+QI+LRLRDD L+DR+ GSRN PP ++
Sbjct: 441 PKSADPNDELVEISGEVSNVRDALIQIVLRLRDDVLRDRETGSRNQPPARSENNNFFSSS 500
Query: 483 SSGTGISMP-PLLPSIPPVGPLGYDQRADSGSGIGML-SSSSLYGYGSLSMGDSPYGSMS 540
SS TG+++P + S+P V + +D+R ++GS + ML SS +YGYGS +G++ YGS S
Sbjct: 501 SSNTGLALPQSFMSSVPQVASVDFDRRPETGSSMSMLPSSGGIYGYGSFPVGNTSYGSNS 560
Query: 541 SYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRV 600
SYSS LYGGLP T+EV +PANAVGKV+G+ G NL NIR+ISGA IE+SDSK+S G RV
Sbjct: 561 SYSSNLYGGLPQSTTMEVRIPANAVGKVMGRGGGNLDNIRRISGAMIEISDSKNSHGGRV 620
Query: 601 ALISGTPEQKRAAENLIQAFIMAT 624
ALISGT EQKR AENL QAFIM+T
Sbjct: 621 ALISGTSEQKRTAENLFQAFIMST 644
>gi|297740744|emb|CBI30926.3| unnamed protein product [Vitis vinifera]
Length = 435
Score = 655 bits (1689), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/436 (77%), Positives = 391/436 (89%), Gaps = 1/436 (0%)
Query: 189 MEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPP 248
MEFDNFVLI+G+SEAVKKALFAISAIMYKF+PRE+IPL+TTV EAPPSIIIPSDVPIYP
Sbjct: 1 MEFDNFVLIAGDSEAVKKALFAISAIMYKFTPREEIPLDTTVPEAPPSIIIPSDVPIYPA 60
Query: 249 GGLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEEL 308
GG YP+AD I+ +RSVP +L A VP+LQGY+D G+TWPVYS+ L +VSG GAS+SEEL
Sbjct: 61 GGFYPSADSIVSARSVPPVLAATHVPELQGYSDMGSTWPVYSSNLPVVSGY-GASRSEEL 119
Query: 309 VIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKS 368
+IRVLCPF+KIGRVIG+GG +IKS+R+ASGA ++VDDTK +RDEC+ITVT+ ES DD+KS
Sbjct: 120 IIRVLCPFDKIGRVIGRGGSSIKSVREASGAHVEVDDTKADRDECLITVTSTESVDDLKS 179
Query: 369 MAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGD 428
MAVEAVLLLQ KINDEDDDTV IRLLV SK+IGCIIGKSGSIINEIRKRT+ADVRISK +
Sbjct: 180 MAVEAVLLLQAKINDEDDDTVAIRLLVPSKIIGCIIGKSGSIINEIRKRTRADVRISKSE 239
Query: 429 KPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSGTGI 488
+PKCADANDEL+EVVGEVGSVRDALVQI+LRLRDDALKDRD N G D +YS G G+
Sbjct: 240 RPKCADANDELIEVVGEVGSVRDALVQIVLRLRDDALKDRDTGHNTSAGTDSLYSGGAGL 299
Query: 489 SMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYG 548
S+ +LPS PPV PL YDQRA++GSG+G+LSSSSLYGYGSLS+G++ YGSMSSYSSKLYG
Sbjct: 300 SVSSVLPSAPPVAPLSYDQRAETGSGLGLLSSSSLYGYGSLSVGENAYGSMSSYSSKLYG 359
Query: 549 GLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPE 608
GLP P T ++++PANAVGKV+GK G+N+ANIRKISGA IE+SDSKSSRGDRVALISGTPE
Sbjct: 360 GLPTPSTFDMVIPANAVGKVMGKGGANIANIRKISGAVIEISDSKSSRGDRVALISGTPE 419
Query: 609 QKRAAENLIQAFIMAT 624
QKR AENLIQAFIMAT
Sbjct: 420 QKRTAENLIQAFIMAT 435
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 87/177 (49%), Gaps = 26/177 (14%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKE 94
E +I R+LCP IG VIG+ G I S+R+ + A V+V D + ++T+ S
Sbjct: 117 EELIIRVLCPFDKIGRVIGRGGSSIKSVREASGAHVEVDDTKADRDECLITVTST----- 171
Query: 95 DVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANI 154
+ +D + + A +A+L + A I N D+D ++LVPS I
Sbjct: 172 -----ESVDDLKSM--AVEAVLLLQAKI-----NDEDDDTV-----AIRLLVPSKIIGCI 214
Query: 155 IGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAI 211
IGK+G+ I +R +TR ++++ + + CA D + + GE +V+ AL I
Sbjct: 215 IGKSGSIINEIRKRTRADVRISKSERPK----CADANDELIEVVGEVGSVRDALVQI 267
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 36/51 (70%), Gaps = 4/51 (7%)
Query: 22 KRRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKV 72
+ +IN++D+ ++V R+L P +IG +IGKSG +IN IR+ TRA V++
Sbjct: 189 QAKINDEDD----DTVAIRLLVPSKIIGCIIGKSGSIINEIRKRTRADVRI 235
>gi|357145086|ref|XP_003573519.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 632
Score = 636 bits (1641), Expect = e-180, Method: Compositional matrix adjust.
Identities = 355/643 (55%), Positives = 463/643 (72%), Gaps = 30/643 (4%)
Query: 1 MGDSGKRYRSQRDNDRDGKNQKRR--INEKDEKGNEESVIYRILCPDGVIGSVIGKSGKV 58
M SGKR RD+DR+G+++KRR ++ ++ N+E V+YRILCPD VIGSVIGK+GKV
Sbjct: 1 MRHSGKRTSQHRDHDREGRDEKRRPAVHTQENSSNDELVVYRILCPDKVIGSVIGKNGKV 60
Query: 59 INSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVE---VDDEFNDKEPLCAAQDAL 115
INSIRQ+T A+VKVVDP+PGA RV+ +Y HV ++ D+ +D+EP+CAAQ+AL
Sbjct: 61 INSIRQQTNAKVKVVDPYPGADKRVILVYCHVHHRDLTHRDIDVDDDDDREPVCAAQNAL 120
Query: 116 LKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKV 175
LKVH AI A+A +D+D EE ILVP+SQ+A++IGK+G+ IKRLRS +++SIKV
Sbjct: 121 LKVHDAIVEALAINSDSDD-----EEANILVPASQAASVIGKSGSVIKRLRSISKSSIKV 175
Query: 176 TPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPP 235
PKD SE THSCAM FDNFV I+G++ AVKKALFA+SAI+YK +E IPLET+V+E PP
Sbjct: 176 RPKDPSEVTHSCAMSFDNFVQITGDARAVKKALFAVSAIIYKSPSKEIIPLETSVQELPP 235
Query: 236 SIIIPSDVPIYPPGGLYPNADPILPS--RSVPSILGA----ARVPDLQGYADTGNTWPVY 289
SIIIPS++P+YP Y +D +PS S+P ILGA +R+P+ AD P+Y
Sbjct: 236 SIIIPSELPVYPASNFYSLSDGAMPSGHPSLP-ILGAPHHVSRIPEFTVPADAHGRLPIY 294
Query: 290 STGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDN 349
+ + + S +L++RV+CP +KIG VIGKGG TIKSIR+ SGA IDVDD K++
Sbjct: 295 QSMVPAIPTYSTPKGSGDLLLRVVCPGDKIGLVIGKGGMTIKSIRKESGANIDVDDAKND 354
Query: 350 RDECVITVTAIESPDDIKSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGS 409
R+E +ITVT+ E+ DD+KS AVEAVLLLQ KIND +D + IRLLV VIGC+IGK GS
Sbjct: 355 REESIITVTSTEATDDVKSAAVEAVLLLQAKINDGIEDRMHIRLLVPGNVIGCLIGKGGS 414
Query: 410 IINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALK--- 466
I+N++R ++KA + ISKG KP+ A ++DELVEV GEV +RDALVQI+LRLR+D LK
Sbjct: 415 IVNDMRNKSKAIIHISKGSKPRRASSSDELVEVFGEVDKLRDALVQIVLRLREDVLKDSV 474
Query: 467 -----DRDGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSS 521
D+DG R + + +YSS SMP LLPS V PL YDQR + G+ + S
Sbjct: 475 ERQNSDKDGKRTIAI-TEPMYSS--NFSMPALLPSTRQVSPLSYDQRGEVERGLDVYPRS 531
Query: 522 SLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRK 581
S Y Y SL D YG+ SSY+SK YGG P +E+++PA+ + KVIGK G+NL NIRK
Sbjct: 532 SSYRYSSLQAVDDGYGAHSSYTSKSYGGRRP--DIEMIIPASGLSKVIGKRGTNLDNIRK 589
Query: 582 ISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFIMAT 624
ISGA IE+ +SKSSR D VA ISGTPEQ+++AENLI+AFIM+T
Sbjct: 590 ISGADIEIIESKSSRHDHVAHISGTPEQRQSAENLIRAFIMST 632
>gi|297804330|ref|XP_002870049.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297315885|gb|EFH46308.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 605
Score = 634 bits (1634), Expect = e-179, Method: Compositional matrix adjust.
Identities = 347/639 (54%), Positives = 446/639 (69%), Gaps = 49/639 (7%)
Query: 1 MGDSGKRYRSQRDNDRDGKNQKRRINEKDEKGN-EESVIYRILCPDGVIGSVIGKSGKVI 59
M + KR ++QR+N+ +NQKRRI+ EK N +E VIYRILCP V+G VIGKSGKVI
Sbjct: 1 MVERKKRKQNQRNNNESNRNQKRRISNNGEKINRDELVIYRILCPIDVVGGVIGKSGKVI 60
Query: 60 NSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVH 119
N+IR T+A++KV D G RV+TIY VK+K++ E+D ++ EPLC AQDALLKV+
Sbjct: 61 NAIRHNTKAKIKVFDQLHGCSQRVITIYCSVKEKKEEEIDFMKSETEPLCCAQDALLKVY 120
Query: 120 AAIANAVANATDNDK-KRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPK 178
AI VA+ +N K R +K+EC +LVPSSQS ++IGKAG IKR+RS TR S+KV K
Sbjct: 121 DAI---VASDEENIKIDRDDKKECLLLVPSSQSFSLIGKAGENIKRIRSTTRASVKVVSK 177
Query: 179 DASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSII 238
D S+P+H CAM++DN V+ISGE E+VKKALFA+SAI+YK +PRE IPL++T ++ P SII
Sbjct: 178 DVSDPSHVCAMDYDNIVVISGEPESVKKALFAVSAILYKINPREHIPLDSTGQDVPASII 237
Query: 239 IPSDV--PIYPPGGLYPNADPILPSRS-VPSILGAARVPDLQGYADT-GNTWPVYSTGLS 294
+ SD+ +YP G Y N D IL R+ VPS A V + QGYA+T N PV+++ L
Sbjct: 238 VSSDLSNSVYPQTGFYSNQDHILQQRAGVPSYFNALSVSNFQGYAETAANPMPVFASSLP 297
Query: 295 LVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDD--TKDNRDE 352
+ G G+S+S+ELV++VLCP + I RVIGKGG TIK IR+ SG+ I+V+D TK DE
Sbjct: 298 VTHGFGGSSRSKELVLKVLCPLSNITRVIGKGGSTIKRIRETSGSCIEVNDSRTKCGDDE 357
Query: 353 CVITVTAIESPDDIKSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIIN 412
CVI VTA ESPDD+KSMAVEAVLLLQ INDED + V ++L VSSK IGC+IGKSGS+IN
Sbjct: 358 CVIIVTATESPDDMKSMAVEAVLLLQEYINDEDAEKVKMQLFVSSKDIGCVIGKSGSVIN 417
Query: 413 EIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRD--- 469
EIRKRT A++ ISKG K D+LVEV GE+ SVR+A++QI+LRLR+D L DRD
Sbjct: 418 EIRKRTNANICISKGKK-------DDLVEVAGEISSVRNAIIQIVLRLREDVLGDRDSVA 470
Query: 470 GSRNPPVGADHIY----SSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYG 525
SR PP D+ SS G ++P + S G +G
Sbjct: 471 ASRKPPARTDNYSLFSGSSNAGYTLPSFMSSASSSG---------------------FHG 509
Query: 526 YGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGA 585
YGS GD+ +GS+S YS +G LP LE+L+PANA+ KV+GK G NL NIR+ISGA
Sbjct: 510 YGSFPAGDNVFGSVSPYS---FGRLPSSSALEILIPANAMSKVMGKGGGNLENIRRISGA 566
Query: 586 TIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFIMAT 624
IE+SDSK+S+GD +AL+SGT EQ R AENL+QAFIM+T
Sbjct: 567 MIEISDSKTSQGDHIALLSGTLEQMRCAENLVQAFIMST 605
>gi|15236863|ref|NP_193572.1| KH domain-containing protein [Arabidopsis thaliana]
gi|15214341|sp|P58223.1|Y4837_ARATH RecName: Full=KH domain-containing protein At4g18375
gi|22136632|gb|AAM91635.1| unknown protein [Arabidopsis thaliana]
gi|332658636|gb|AEE84036.1| KH domain-containing protein [Arabidopsis thaliana]
Length = 606
Score = 629 bits (1623), Expect = e-177, Method: Compositional matrix adjust.
Identities = 344/638 (53%), Positives = 441/638 (69%), Gaps = 46/638 (7%)
Query: 1 MGDSGKRYRSQRDNDRDGKNQKRRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVIN 60
M + KR + QR+N +NQKRRI+ D+ +E V+YRILCP V+G VIGKSGKVIN
Sbjct: 1 MVERKKRKQIQRNNSESNRNQKRRISH-DKINRDELVVYRILCPIDVVGGVIGKSGKVIN 59
Query: 61 SIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHA 120
+IR T+A++KV D G RV+TIY VK+K++ E+ ++ EPLC AQDALLKV+
Sbjct: 60 AIRHNTKAKIKVFDQLHGCSQRVITIYCSVKEKQE-EIGFTKSENEPLCCAQDALLKVYD 118
Query: 121 AI-ANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKD 179
AI A+ N T + R + +EC++LVP SQS+++IGKAG IKR+R +TR S+KV KD
Sbjct: 119 AIVASDEENNTKTNVDRDDNKECRLLVPFSQSSSLIGKAGENIKRIRRRTRASVKVVSKD 178
Query: 180 ASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAP-PSII 238
S+P+H CAME+DN V+ISGE E+VK+ALFA+SAIMYK +PRE+IPL++T ++ P S+I
Sbjct: 179 VSDPSHVCAMEYDNVVVISGEPESVKQALFAVSAIMYKINPRENIPLDSTSQDVPAASVI 238
Query: 239 IPSDV--PIYPPGGLYPNADPILPSRS-VPSILGAARVPDLQGYADT-GNTWPVYSTGLS 294
+PSD+ +YP G Y N D IL + VPS A V D QGYA+T N PV+++ L
Sbjct: 239 VPSDLSNSVYPQTGFYSNQDHILQQGAGVPSYFNALSVSDFQGYAETAANPVPVFASSLP 298
Query: 295 LVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDD--TKDNRDE 352
+ G G+S+SEELV +VLCP I RVIGKGG TIK IR+ASG+ I+V+D TK DE
Sbjct: 299 VTHGFGGSSRSEELVFKVLCPLCNIMRVIGKGGSTIKRIREASGSCIEVNDSRTKCGDDE 358
Query: 353 CVITVTAIESPDDIKSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIIN 412
CVI VTA ESPDD+KSMAVEAVLLLQ INDED + V ++LLVSSKVIGC+IGKSGS+IN
Sbjct: 359 CVIIVTATESPDDMKSMAVEAVLLLQEYINDEDAENVKMQLLVSSKVIGCVIGKSGSVIN 418
Query: 413 EIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRD--G 470
EIRKRT A++ ISKG K D+LVEV GEV SVRDAL+QI+LRLR+D L D+D
Sbjct: 419 EIRKRTNANICISKGKK-------DDLVEVSGEVSSVRDALIQIVLRLREDVLGDKDSVA 471
Query: 471 SRNPPVGADHIY----SSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGY 526
+R PP D+ SS G ++P + S M S+S +GY
Sbjct: 472 TRKPPARTDNCSFLSGSSNAGYTLPSFMSS--------------------MASTSGFHGY 511
Query: 527 GSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGAT 586
GS GD+ GS YS YG LP LE+L+PA+A+ KV+GK G NL NIR+ISGA
Sbjct: 512 GSFPAGDNVLGSTGPYS---YGRLPSSSALEILIPAHAMSKVMGKGGGNLENIRRISGAM 568
Query: 587 IEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFIMAT 624
IE+S SK+S GD +AL+SGT EQ R AENL+QAF+M+T
Sbjct: 569 IEISASKTSHGDHIALLSGTLEQMRCAENLVQAFVMST 606
>gi|242078463|ref|XP_002444000.1| hypothetical protein SORBIDRAFT_07g005630 [Sorghum bicolor]
gi|241940350|gb|EES13495.1| hypothetical protein SORBIDRAFT_07g005630 [Sorghum bicolor]
Length = 629
Score = 628 bits (1619), Expect = e-177, Method: Compositional matrix adjust.
Identities = 338/635 (53%), Positives = 450/635 (70%), Gaps = 24/635 (3%)
Query: 4 SGKRYRSQRDNDRDG-KNQKRRI--NEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVIN 60
+GKR R R+ +R+ K+Q +R + ++ N+ V+YRILCPD +IGSVIGK+G VIN
Sbjct: 5 TGKRPRQHREYEREERKDQHKRPFPHAQESSNNDGLVLYRILCPDSLIGSVIGKNGNVIN 64
Query: 61 SIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHA 120
+IRQ+T A+VKVVDP+PGA RV+ +Y +VK + ++D E +D EP+CAAQDALL+VH
Sbjct: 65 AIRQQTSAKVKVVDPYPGADKRVILVYCYVKHR---DLDAEVDDNEPVCAAQDALLRVHN 121
Query: 121 AIANAVA-NATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKD 179
AI + + N D+DK K EE ILVP+SQ++N+IGK+GA IK LRS +R IKV+PKD
Sbjct: 122 AIVDTLHRNRRDSDK--KNTEEANILVPASQASNVIGKSGAVIKHLRSTSRAFIKVSPKD 179
Query: 180 ASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSIII 239
S+ THSCAM FDNFV I+G +EAVKKALF +S I+YK +E+IPLET++ E PSIII
Sbjct: 180 PSDATHSCAMSFDNFVQITGGAEAVKKALFGVSTIIYKHPSKENIPLETSIPEPTPSIII 239
Query: 240 PSDVPIYPPGGLYPNADPILPS-RSVPSILGAA-RVPDLQGYADTGNTWPVYSTGLSLVS 297
PS++P+YP Y D +PS SILG+ VP+L AD P+Y + L ++
Sbjct: 240 PSELPVYPASNFYSAPDAAIPSVHPSLSILGSTHHVPELALPADDHGRLPIYPSILPVIP 299
Query: 298 GLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITV 357
S EL RVLCP KIG VIG+GG TIK+IRQ SGA+IDVDD K++R+E +IT+
Sbjct: 300 TYSAPKCSGELEFRVLCPSGKIGLVIGRGGATIKNIRQESGARIDVDDAKNDREESIITI 359
Query: 358 TAIESPDDIKSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKR 417
T+ E+ DD+KS AVEAVLLLQ KIND +DD + +RLLV +KVIGC+IG+ GSI+N++RK+
Sbjct: 360 TSTEAIDDVKSAAVEAVLLLQAKINDYEDDRMNLRLLVPNKVIGCLIGRGGSIVNDMRKK 419
Query: 418 TKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALK--------DRD 469
TKA++ ISKGDKP+ A ++DELVEV GE +RDALVQIILRLR+D LK DRD
Sbjct: 420 TKANILISKGDKPRRASSSDELVEVSGEADKLRDALVQIILRLREDVLKESVESQNSDRD 479
Query: 470 GSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSL 529
G +D +Y G+ +S+P LLP P + PL YD+R +S + + +S YGY S+
Sbjct: 480 GKLTVAT-SDSLY--GSSLSLPALLPHNPQIAPLSYDRRGESERALEVFPRTSSYGYSSM 536
Query: 530 SMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEM 589
+ D YG + SY+SK Y P E+ +PA+ + KV+GK G+NL NIRKISGA IE+
Sbjct: 537 QVTDDGYGGLPSYTSKAYEEHLP--RDEMTIPASGLSKVMGKRGTNLDNIRKISGAHIEI 594
Query: 590 SDSKSSRGDRVALISGTPEQKRAAENLIQAFIMAT 624
+SKSSR D +A ISGT EQ+++AENLI+AFIM+T
Sbjct: 595 IESKSSRHDHIAYISGTSEQRQSAENLIKAFIMST 629
>gi|13605589|gb|AAK32788.1|AF361620_1 AT5g46190/MCL19_25 [Arabidopsis thaliana]
Length = 640
Score = 624 bits (1608), Expect = e-176, Method: Compositional matrix adjust.
Identities = 344/582 (59%), Positives = 448/582 (76%), Gaps = 27/582 (4%)
Query: 19 KNQKRRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPG 78
++++++I+ KD+ V+YRILCP GV+GSVIGKSGKVIN IRQETRAR+KVVDPFPG
Sbjct: 30 ESEEKKIDNKDDL----VVVYRILCPSGVMGSVIGKSGKVINLIRQETRARIKVVDPFPG 85
Query: 79 AKDRVVTIYSHVKDKEDVEVDDEFNDKE---PLCAAQDALLKVHAAIANAVANATDNDK- 134
+RV+TI+ V +K+D+ VD E+++ + PLC+AQ ALLKVH AI ++A A +N K
Sbjct: 86 CSERVITIFCSVSEKKDI-VDIEYSELDYSVPLCSAQAALLKVHDAIVASLATAAENTKI 144
Query: 135 KRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNF 194
R + EC++LVPSSQ + +IGK+G+ IK +R +TR ++KV KD S+P+H+CAM+FDN
Sbjct: 145 DRDDFRECRLLVPSSQCSIVIGKSGSIIKNIRGRTRANVKVVSKDVSDPSHTCAMDFDNI 204
Query: 195 VLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPN 254
V+ISGE+E+VKKALFA+SAIMYK SPRE IPL+TTV+E P SIIIPSD+ IYP GLYP+
Sbjct: 205 VMISGETESVKKALFAVSAIMYKVSPREQIPLDTTVQEVPASIIIPSDLSIYPQAGLYPS 264
Query: 255 ADPILPS-RSVPSILGAARVPDLQGYADT-GNTWPVYS-TGLSLVSGLVGASQSEELVIR 311
D I +V S +G +P QGY + N PV+S + L +V G G+S+SE+L I+
Sbjct: 265 QDSIFQHGANVSSFIGT--LP--QGYGENAANPVPVFSASALPVVHGFGGSSRSEKLAIK 320
Query: 312 VLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNR-DECVITVTAIESPDDIKSMA 370
V+C +KIGRVIGKGG TIK IRQASG+ I+V+D++ N D+CVITVTA ESPDD+KSMA
Sbjct: 321 VICSSSKIGRVIGKGGLTIKGIRQASGSHIEVNDSRTNHDDDCVITVTATESPDDLKSMA 380
Query: 371 VEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDK- 429
VEAVLLLQ KINDED+D V ++LLVSSKVIGCIIGKSGSII+EIRKRTKAD+ ISKG+
Sbjct: 381 VEAVLLLQEKINDEDEDKVKMQLLVSSKVIGCIIGKSGSIISEIRKRTKADIHISKGNNT 440
Query: 430 PKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRD-GSRN-PPVGAD-----HIY 482
PKCAD NDELVE+ GEV +VRDAL+QI+LRLRDD L+DR+ GSRN PP ++
Sbjct: 441 PKCADPNDELVEISGEVSNVRDALIQIVLRLRDDVLRDRETGSRNQPPARSENNNFFSSS 500
Query: 483 SSGTGISMP-PLLPSIPPVGPLGYDQRADSGSGIGML-SSSSLYGYGSLSMGDSPYGSMS 540
SS TG+++P + S+P V + +++R ++GS + ML SS +YGYGS +G++ YGS S
Sbjct: 501 SSNTGLALPQSFMSSVPQVASVDFNRRPETGSSMSMLPSSGGIYGYGSFPVGNTSYGSNS 560
Query: 541 SYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKI 582
SYSS LYGGLP T+EV +PANAVGKV+G+ G NL NIR++
Sbjct: 561 SYSSNLYGGLPQSTTMEVRIPANAVGKVMGRGGGNLDNIRRV 602
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 101/348 (29%), Positives = 154/348 (44%), Gaps = 87/348 (25%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITV-TAIESPDDI 366
+V R+LCP +G VIGK G I IRQ + A+I V D E VIT+ ++ DI
Sbjct: 44 VVYRILCPSGVMGSVIGKSGKVINLIRQETRARIKVVDPFPGCSERVITIFCSVSEKKDI 103
Query: 367 KSM------------AVEAVLLLQTKIND---------------EDDDTVTIRLLVSSKV 399
+ + +A LL K++D + DD RLLV S
Sbjct: 104 VDIEYSELDYSVPLCSAQAALL---KVHDAIVASLATAAENTKIDRDDFRECRLLVPSSQ 160
Query: 400 IGCIIGKSGSIINEIRKRTKADVRISKGD----KPKCADANDELVEVVGEVGSVRDALVQ 455
+IGKSGSII IR RT+A+V++ D CA D +V + GE SV+ AL
Sbjct: 161 CSIVIGKSGSIIKNIRGRTRANVKVVSKDVSDPSHTCAMDFDNIVMISGETESVKKALFA 220
Query: 456 IILRLRDDALKDR------------------DGSRNPPVG----ADHIYSSGTGISMPPL 493
+ + + +++ D S P G D I+ G +S
Sbjct: 221 VSAIMYKVSPREQIPLDTTVQEVPASIIIPSDLSIYPQAGLYPSQDSIFQHGANVS---- 276
Query: 494 LPSIPPVGPLGYDQRADSGSGIGMLSSSSL---YGYGSLSMGDSPYGSMSSYSSKLYGGL 550
S P GY + A + + + S+S+L +G+G SS S KL
Sbjct: 277 --SFIGTLPQGYGENA--ANPVPVFSASALPVVHGFGG-----------SSRSEKL---- 317
Query: 551 PPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGD 598
++V+ ++ +G+VIGK G + IR+ SG+ IE++DS+++ D
Sbjct: 318 ----AIKVICSSSKIGRVIGKGGLTIKGIRQASGSHIEVNDSRTNHDD 361
>gi|413917022|gb|AFW56954.1| hypothetical protein ZEAMMB73_179405 [Zea mays]
Length = 632
Score = 619 bits (1597), Expect = e-174, Method: Compositional matrix adjust.
Identities = 331/636 (52%), Positives = 439/636 (69%), Gaps = 23/636 (3%)
Query: 4 SGKRYRSQRDNDRDGK--NQKRRINEKDEKGNEES-VIYRILCPDGVIGSVIGKSGKVIN 60
+GKR R+ +R+ + KR E N + V+YRILCPD +IGSVIGK G VIN
Sbjct: 5 TGKRPSQHREYEREERKDQHKRPFPRAQESSNNDGLVLYRILCPDSLIGSVIGKHGNVIN 64
Query: 61 SIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHA 120
+IR +T A+VKVVDP+PGA RV+ +Y +VK ++ +D E +D EP+CAAQDALL+VH
Sbjct: 65 AIRHQTSAKVKVVDPYPGADKRVILVYCYVKHRD---LDAEGDDNEPVCAAQDALLRVHN 121
Query: 121 AIANAVANATDN--DKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPK 178
AI +A+ N D +K EE ILVP+SQ++N+IGK+GA IK LRS +R IKV+PK
Sbjct: 122 AIVDALQTLHKNHKDSDKKSTEEANILVPASQASNVIGKSGAVIKHLRSTSRAFIKVSPK 181
Query: 179 DASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSII 238
D S+PTHSCAM FDNFV I+G +EAVKKALF +S I+YK +E+IPLET++ + PSII
Sbjct: 182 DPSDPTHSCAMSFDNFVQITGGAEAVKKALFGVSTIIYKHPSKENIPLETSIPDPTPSII 241
Query: 239 IPSDVPIYPPGGLYPNADPILPS-RSVPSILGAAR-VPDLQGYADTGNTWPVYSTGLSLV 296
IPS++P+YP Y D +PS S+LG+ R VP+L AD P+Y + L ++
Sbjct: 242 IPSELPVYPASNFYSAPDAAIPSVHPSMSVLGSTRHVPELAVPADDHGRLPIYQSILPVI 301
Query: 297 SGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVIT 356
S EL RVLCP KIG VIG+GG TIK+IRQ SGA+IDVDD K++++E +IT
Sbjct: 302 PTYSAPKCSGELEFRVLCPGGKIGLVIGRGGATIKNIRQESGARIDVDDAKNDKEESIIT 361
Query: 357 VTAIESPDDIKSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
+ + ES DD+KS AVEAVLLLQ KIND +DD + +RLLV +KVIGC+IG+ GSI+N++RK
Sbjct: 362 IISTESTDDVKSAAVEAVLLLQAKINDSEDDRMNLRLLVPNKVIGCLIGRGGSIVNDMRK 421
Query: 417 RTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALK--------DR 468
+TKA++ ISKGDKP+ A ++DELVEV GE +RDALVQIILRLR+ LK DR
Sbjct: 422 KTKANILISKGDKPRRASSSDELVEVSGEADKLRDALVQIILRLREAVLKESVESQNSDR 481
Query: 469 DGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGS 528
DG +D +Y G+ + +P LLP + PLGYD+R + + + +S YGY S
Sbjct: 482 DGQLT-VAASDSLY--GSSLPLPALLPHNQQIAPLGYDRRGEPERALEVFPRTSSYGYSS 538
Query: 529 LSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIE 588
+ + D YG + SY+SK Y P LE+ VPA+ + KV+GK G+NL NIRKISGA IE
Sbjct: 539 MQVTDDGYGGLPSYASKAYEEHVP--RLEMTVPASGISKVMGKHGTNLDNIRKISGAHIE 596
Query: 589 MSDSKSSRGDRVALISGTPEQKRAAENLIQAFIMAT 624
+ + KSSR + +A ISGT EQ+ +AENLI+AFIM+T
Sbjct: 597 IIEPKSSRHEHIAYISGTSEQRHSAENLIKAFIMST 632
>gi|388500506|gb|AFK38319.1| unknown [Lotus japonicus]
Length = 437
Score = 615 bits (1586), Expect = e-173, Method: Compositional matrix adjust.
Identities = 305/438 (69%), Positives = 369/438 (84%), Gaps = 3/438 (0%)
Query: 189 MEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPP 248
MEFDNFV+I+GESE+VK+ALFA+S+IMYKF P+EDI L+TTV EAPPSIIIPS+VP YP
Sbjct: 1 MEFDNFVVITGESESVKRALFAVSSIMYKFGPKEDISLDTTVPEAPPSIIIPSEVPYYPH 60
Query: 249 GGLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEEL 308
GGLYP++DPI+P R+VP I+G + D+QGYAD GNTWP+YS+ L +VSG V ASQSEEL
Sbjct: 61 GGLYPSSDPIIPPRAVPQIMGGTNIQDVQGYADIGNTWPLYSSALPVVSGGVDASQSEEL 120
Query: 309 VIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKS 368
+IR+LCP NKIGRVIG+GG TIKS+RQASG +I+VDD+K N DEC+I +T ESP D+KS
Sbjct: 121 IIRMLCPSNKIGRVIGRGGSTIKSMRQASGTRIEVDDSKANHDECLIIITTTESPSDLKS 180
Query: 369 MAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGD 428
MAVEAVLL+Q KI+DEDD V+I+LLV SKVIGCIIGKSGSIINEIRKRT+AD+RISKGD
Sbjct: 181 MAVEAVLLIQGKISDEDDTEVSIQLLVPSKVIGCIIGKSGSIINEIRKRTRADIRISKGD 240
Query: 429 KPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSGTGI 488
KPKCAD NDELVEV G + VRDAL+QIILRLRDD L++RD NP +G + +YS G
Sbjct: 241 KPKCADVNDELVEVGGAIDCVRDALIQIILRLRDDVLRERDTGHNPTIGGESLYSGGAAY 300
Query: 489 SMPPLLPSIPPV-GPLGYDQRADSGSGIGM-LSSSSLYGYGSLSMGDSPYGSMSSYSSKL 546
S+PP+LPS+ V P+ YDQRA+S +G+GM SSS M +S YGS+SSY +KL
Sbjct: 301 SLPPMLPSVSSVAAPMVYDQRAESATGMGMLSSSSLYGYGSLSQMWESGYGSISSYPTKL 360
Query: 547 YGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGT 606
YG LPPP TL++L+PANAVGKV+GK G+N+ANIRKISGATIE+SD++ +RGDR+ALISGT
Sbjct: 361 YGSLPPPSTLDILIPANAVGKVLGKGGANIANIRKISGATIEISDAR-ARGDRIALISGT 419
Query: 607 PEQKRAAENLIQAFIMAT 624
PE+KRAAENLIQAFIMAT
Sbjct: 420 PEEKRAAENLIQAFIMAT 437
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 142/337 (42%), Gaps = 55/337 (16%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKE 94
E +I R+LCP IG VIG+ G I S+RQ + R++ VD D + I + +
Sbjct: 118 EELIIRMLCPSNKIGRVIGRGGSTIKSMRQASGTRIE-VDDSKANHDECLIIITTTESPS 176
Query: 95 DVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANI 154
D++ A +A+L + I +D D + Q+LVPS I
Sbjct: 177 DLK-----------SMAVEAVLLIQGKI-------SDEDDT---EVSIQLLVPSKVIGCI 215
Query: 155 IGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAI 214
IGK+G+ I +R +TR I+++ D + CA D V + G + V+ AL I
Sbjct: 216 IGKSGSIINEIRKRTRADIRISKGDKPK----CADVNDELVEVGGAIDCVRDALIQIILR 271
Query: 215 MYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVP 274
+ R+D+ E P +Y G Y + P+LPS S + A V
Sbjct: 272 L-----RDDVLRERDTGHNPTI----GGESLYSGGAAY-SLPPMLPSVSS---VAAPMVY 318
Query: 275 DLQGYADTG----------------NTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNK 318
D + + TG W +S + S + +L P N
Sbjct: 319 DQRAESATGMGMLSSSSLYGYGSLSQMWESGYGSISSYPTKLYGSLPPPSTLDILIPANA 378
Query: 319 IGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVI 355
+G+V+GKGG I +IR+ SGA I++ D + D +
Sbjct: 379 VGKVLGKGGANIANIRKISGATIEISDARARGDRIAL 415
Score = 42.4 bits (98), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%), Gaps = 2/44 (4%)
Query: 29 DEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKV 72
DE E S+ ++L P VIG +IGKSG +IN IR+ TRA +++
Sbjct: 195 DEDDTEVSI--QLLVPSKVIGCIIGKSGSIINEIRKRTRADIRI 236
>gi|326517934|dbj|BAK07219.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 632
Score = 613 bits (1580), Expect = e-172, Method: Compositional matrix adjust.
Identities = 340/642 (52%), Positives = 448/642 (69%), Gaps = 28/642 (4%)
Query: 1 MGDSGKRYRSQRDNDRDGKNQKRR-INEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVI 59
M SGKR RD+DR+ ++QKRR + ++ G E V+YRILCPD VIGSVIGK GKVI
Sbjct: 1 MNPSGKRTGQHRDHDREDRDQKRRPAHTQETSGMAELVVYRILCPDKVIGSVIGKGGKVI 60
Query: 60 NSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDD----EFNDKEPLCAAQDAL 115
NSIRQ+T A+VKVVDP+PGA RV+ +Y +VK + DV + D + +D+EP+CAAQ+AL
Sbjct: 61 NSIRQQTNAKVKVVDPYPGADKRVILVYCYVKHR-DVMLSDINADDDDDREPVCAAQNAL 119
Query: 116 LKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKV 175
LKVH AI A+A D+D K E ILVP+SQ+A++IGK+G+ IK+LRS +++ IKV
Sbjct: 120 LKVHDAIVGALAVTDDSDDK-----EANILVPASQAASVIGKSGSVIKKLRSVSKSFIKV 174
Query: 176 TPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPP 235
PKD S+ THSCAM FDNFV I+G++ AVKKALFA+S IMYK +E+IPLET++ E PP
Sbjct: 175 KPKDPSDVTHSCAMSFDNFVQITGDARAVKKALFAVSTIMYKCPSKENIPLETSIDELPP 234
Query: 236 SIIIPSDVPIYPPGGLYPNADPILPS-RSVPSILGA----ARVPDLQGYADTGNTWPVYS 290
+II+PS++P+YP LY +D +PS SILGA + VPD DT P+Y
Sbjct: 235 TIILPSELPVYPASSLYSVSDASMPSGHPSLSILGATSRGSHVPDFTVPIDTHGGLPIYQ 294
Query: 291 TGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNR 350
+ + V S EL++RV+CP +KIG VIGK G TIK+IR+ SGA++DVDD K+++
Sbjct: 295 SMVPAVPTYNTPKCSGELLLRVVCPGDKIGLVIGKAGMTIKNIRKESGARVDVDDAKNDK 354
Query: 351 DECVITVTAIESPDDIKSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSI 410
+E +ITV++ E+ DD+KS AVEAVLLLQ KINDE +D + +RLLV VIGC+IGK GSI
Sbjct: 355 EESIITVSSTEATDDVKSAAVEAVLLLQAKINDETEDRMHLRLLVPGNVIGCLIGKGGSI 414
Query: 411 INEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDG 470
IN++R ++KA + ISKG KP+ A ++DELVEV GEV +RDALVQI+LRLR+D LKD G
Sbjct: 415 INDMRNKSKAIIHISKGTKPRKASSSDELVEVFGEVDKLRDALVQIVLRLREDVLKDSVG 474
Query: 471 SRNPPVGADHIYS-------SGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSL 523
+N G D + S + MP LLP + PL +DQR + G + SSL
Sbjct: 475 RQNS--GKDGKLTVATTEPVSSSSFPMPALLPYSQQITPLRHDQRGEVERGSNVFPRSSL 532
Query: 524 Y-GYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKI 582
Y GY D +G SSY+SK YG P +E+ +P++ + KV+GK G+NL NIRKI
Sbjct: 533 YHGYSPREAVDDGFGVRSSYTSKPYGRRVP--DMEMFIPSSGLSKVMGKHGTNLDNIRKI 590
Query: 583 SGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFIMAT 624
SGA IE+ +SKSSR D VA I GTPEQ ++AENLI+AFIM+T
Sbjct: 591 SGADIEILESKSSRHDHVAHIFGTPEQWQSAENLIKAFIMST 632
>gi|30684386|ref|NP_849406.1| KH domain-containing protein [Arabidopsis thaliana]
gi|24762211|gb|AAN64172.1| putative KH domain protein [Arabidopsis thaliana]
gi|332658635|gb|AEE84035.1| KH domain-containing protein [Arabidopsis thaliana]
Length = 532
Score = 531 bits (1369), Expect = e-148, Method: Compositional matrix adjust.
Identities = 295/557 (52%), Positives = 379/557 (68%), Gaps = 43/557 (7%)
Query: 1 MGDSGKRYRSQRDNDRDGKNQKRRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVIN 60
M + KR + QR+N +NQKRRI+ D+ +E V+YRILCP V+G VIGKSGKVIN
Sbjct: 1 MVERKKRKQIQRNNSESNRNQKRRISH-DKINRDELVVYRILCPIDVVGGVIGKSGKVIN 59
Query: 61 SIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHA 120
+IR T+A++KV D G RV+TIY VK+K++ E+ ++ EPLC AQDALLKV+
Sbjct: 60 AIRHNTKAKIKVFDQLHGCSQRVITIYCSVKEKQE-EIGFTKSENEPLCCAQDALLKVYD 118
Query: 121 AI-ANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKD 179
AI A+ N T + R + +EC++LVP SQS+++IGKAG IKR+R +TR S+KV KD
Sbjct: 119 AIVASDEENNTKTNVDRDDNKECRLLVPFSQSSSLIGKAGENIKRIRRRTRASVKVVSKD 178
Query: 180 ASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAP-PSII 238
S+P+H CAME+DN V+ISGE E+VK+ALFA+SAIMYK +PRE+IPL++T ++ P S+I
Sbjct: 179 VSDPSHVCAMEYDNVVVISGEPESVKQALFAVSAIMYKINPRENIPLDSTSQDVPAASVI 238
Query: 239 IPSDV--PIYPPGGLYPNADPILPSRS-VPSILGAARVPDLQGYADT-GNTWPVYSTGLS 294
+PSD+ +YP G Y N D IL + VPS A V D QGYA+T N PV+++ L
Sbjct: 239 VPSDLSNSVYPQTGFYSNQDHILQQGAGVPSYFNALSVSDFQGYAETAANPVPVFASSLP 298
Query: 295 LVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDD--TKDNRDE 352
+ G G+S+SEELV +VLCP I RVIGKGG TIK IR+ASG+ I+V+D TK DE
Sbjct: 299 VTHGFGGSSRSEELVFKVLCPLCNIMRVIGKGGSTIKRIREASGSCIEVNDSRTKCGDDE 358
Query: 353 CVITVTAIESPDDIKSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIIN 412
CVI VTA ESPDD+KSMAVEAVLLLQ INDED + V ++LLVSSKVIGC+IGKSGS+IN
Sbjct: 359 CVIIVTATESPDDMKSMAVEAVLLLQEYINDEDAENVKMQLLVSSKVIGCVIGKSGSVIN 418
Query: 413 EIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRD--G 470
EIRKRT A++ ISKG K D+LVEV GEV SVRDAL+QI+LRLR+D L D+D
Sbjct: 419 EIRKRTNANICISKGKK-------DDLVEVSGEVSSVRDALIQIVLRLREDVLGDKDSVA 471
Query: 471 SRNPPVGADHIY----SSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGY 526
+R PP D+ SS G ++P + S M S+S +GY
Sbjct: 472 TRKPPARTDNCSFLSGSSNAGYTLPSFMSS--------------------MASTSGFHGY 511
Query: 527 GSLSMGDSPYGSMSSYS 543
GS GD+ GS YS
Sbjct: 512 GSFPAGDNVLGSTGPYS 528
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 98/337 (29%), Positives = 150/337 (44%), Gaps = 42/337 (12%)
Query: 303 SQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTA--- 359
++ E +V R+LCP + +G VIGK G I +IR + A+I V D + VIT+
Sbjct: 31 NRDELVVYRILCPIDVVGGVIGKSGKVINAIRHNTKAKIKVFDQLHGCSQRVITIYCSVK 90
Query: 360 --------IESPDDIKSMAVEAVLLL-----------QTKINDEDDDTVTIRLLVSSKVI 400
+S ++ A +A+L + TK N + DD RLLV
Sbjct: 91 EKQEEIGFTKSENEPLCCAQDALLKVYDAIVASDEENNTKTNVDRDDNKECRLLVPFSQS 150
Query: 401 GCIIGKSGSIINEIRKRTKADVRISKGD----KPKCADANDELVEVVGEVGSVRDALVQI 456
+IGK+G I IR+RT+A V++ D CA D +V + GE SV+ AL +
Sbjct: 151 SSLIGKAGENIKRIRRRTRASVKVVSKDVSDPSHVCAMEYDNVVVISGEPESVKQALFAV 210
Query: 457 ILRLRDDALKDRDGSR-NPPVGADHIYSSGTGISMPPLLPS--IPPVGPL-GYDQRADSG 512
A+ + R N P+ + + +P L + P G D G
Sbjct: 211 ------SAIMYKINPRENIPLDSTSQDVPAASVIVPSDLSNSVYPQTGFYSNQDHILQQG 264
Query: 513 SGI----GMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGG--LPPPLTLEVLVPANAVG 566
+G+ LS S GY + P + S + +GG L +VL P +
Sbjct: 265 AGVPSYFNALSVSDFQGYAETAANPVPVFASSLPVTHGFGGSSRSEELVFKVLCPLCNIM 324
Query: 567 KVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALI 603
+VIGK GS + IR+ SG+ IE++DS++ GD +I
Sbjct: 325 RVIGKGGSTIKRIREASGSCIEVNDSRTKCGDDECVI 361
>gi|7486302|pir||T04533 hypothetical protein F28J12.30 - Arabidopsis thaliana
gi|2832642|emb|CAA16717.1| putative protein [Arabidopsis thaliana]
gi|7268630|emb|CAB78839.1| putative protein [Arabidopsis thaliana]
Length = 846
Score = 514 bits (1323), Expect = e-143, Method: Compositional matrix adjust.
Identities = 289/557 (51%), Positives = 372/557 (66%), Gaps = 57/557 (10%)
Query: 1 MGDSGKRYRSQRDNDRDGKNQKRRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVIN 60
M + KR + QR+N +NQKRRI+ D+ +E V+YRILCP V+G VIGKSGKVIN
Sbjct: 309 MVERKKRKQIQRNNSESNRNQKRRISH-DKINRDELVVYRILCPIDVVGGVIGKSGKVIN 367
Query: 61 SIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHA 120
+IR T+A++KV D G RV+TIY VK+K++ E+ ++ EPLC AQDALLKV+
Sbjct: 368 AIRHNTKAKIKVFDQLHGCSQRVITIYCSVKEKQE-EIGFTKSENEPLCCAQDALLKVYD 426
Query: 121 AI-ANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKD 179
AI A+ N T + R + +EC++LVP SQS+++IGKAG IKR+R +TR S+KV KD
Sbjct: 427 AIVASDEENNTKTNVDRDDNKECRLLVPFSQSSSLIGKAGENIKRIRRRTRASVKVVSKD 486
Query: 180 ASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAP-PSII 238
S+P+H CAME+DN V+ISGE E+VK+ALFA+SAIMYK +PRE+IPL++T ++ P S+I
Sbjct: 487 VSDPSHVCAMEYDNVVVISGEPESVKQALFAVSAIMYKINPRENIPLDSTSQDVPAASVI 546
Query: 239 IPSDV--PIYPPGGLYPNADPILPSRS-VPSILGAARVPDLQGYADT-GNTWPVYSTGLS 294
+PSD+ +YP G Y N D IL + VPS A V D QGYA+T N PV+++ L
Sbjct: 547 VPSDLSNSVYPQTGFYSNQDHILQQGAGVPSYFNALSVSDFQGYAETAANPVPVFASSLP 606
Query: 295 LVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDD--TKDNRDE 352
+ G G+S+SEELV +VLCP I RVIGKGG TIK IR+ASG+ I+V+D TK DE
Sbjct: 607 VTHGFGGSSRSEELVFKVLCPLCNIMRVIGKGGSTIKRIREASGSCIEVNDSRTKCGDDE 666
Query: 353 CVITVTAIE--------------SPDDIKSMAVEAVLLLQTKINDEDDDTVTIRLLVSSK 398
CVI VTA E SPDD+KSMAVEAVLLLQ INDED + V ++LLVSSK
Sbjct: 667 CVIIVTATEILFCCLSTPFVFMQSPDDMKSMAVEAVLLLQEYINDEDAENVKMQLLVSSK 726
Query: 399 VIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIIL 458
VIGC+IGKSGS+INEIRKRT A++ ISKG K D+LVEV GEV SVRDAL+QI+L
Sbjct: 727 VIGCVIGKSGSVINEIRKRTNANICISKGKK-------DDLVEVSGEVSSVRDALIQIVL 779
Query: 459 RLRDDALKDRD--GSRNPPVGADHIY----SSGTGISMPPLLPSIPPVGPLGYDQRADSG 512
RLR+D L D+D +R PP D+ SS G ++P + S
Sbjct: 780 RLREDVLGDKDSVATRKPPARTDNCSFLSGSSNAGYTLPSFMSS---------------- 823
Query: 513 SGIGMLSSSSLYGYGSL 529
M S+S +GYGS
Sbjct: 824 ----MASTSGFHGYGSF 836
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 98/337 (29%), Positives = 150/337 (44%), Gaps = 42/337 (12%)
Query: 303 SQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTA--- 359
++ E +V R+LCP + +G VIGK G I +IR + A+I V D + VIT+
Sbjct: 339 NRDELVVYRILCPIDVVGGVIGKSGKVINAIRHNTKAKIKVFDQLHGCSQRVITIYCSVK 398
Query: 360 --------IESPDDIKSMAVEAVLLL-----------QTKINDEDDDTVTIRLLVSSKVI 400
+S ++ A +A+L + TK N + DD RLLV
Sbjct: 399 EKQEEIGFTKSENEPLCCAQDALLKVYDAIVASDEENNTKTNVDRDDNKECRLLVPFSQS 458
Query: 401 GCIIGKSGSIINEIRKRTKADVRISKGD----KPKCADANDELVEVVGEVGSVRDALVQI 456
+IGK+G I IR+RT+A V++ D CA D +V + GE SV+ AL +
Sbjct: 459 SSLIGKAGENIKRIRRRTRASVKVVSKDVSDPSHVCAMEYDNVVVISGEPESVKQALFAV 518
Query: 457 ILRLRDDALKDRDGSR-NPPVGADHIYSSGTGISMPPLLPS--IPPVGPL-GYDQRADSG 512
A+ + R N P+ + + +P L + P G D G
Sbjct: 519 ------SAIMYKINPRENIPLDSTSQDVPAASVIVPSDLSNSVYPQTGFYSNQDHILQQG 572
Query: 513 SGI----GMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGG--LPPPLTLEVLVPANAVG 566
+G+ LS S GY + P + S + +GG L +VL P +
Sbjct: 573 AGVPSYFNALSVSDFQGYAETAANPVPVFASSLPVTHGFGGSSRSEELVFKVLCPLCNIM 632
Query: 567 KVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALI 603
+VIGK GS + IR+ SG+ IE++DS++ GD +I
Sbjct: 633 RVIGKGGSTIKRIREASGSCIEVNDSRTKCGDDECVI 669
>gi|224116392|ref|XP_002317286.1| predicted protein [Populus trichocarpa]
gi|222860351|gb|EEE97898.1| predicted protein [Populus trichocarpa]
Length = 363
Score = 513 bits (1321), Expect = e-142, Method: Compositional matrix adjust.
Identities = 269/363 (74%), Positives = 315/363 (86%), Gaps = 5/363 (1%)
Query: 1 MGDSGKRYRSQRDNDRDGKNQKRRINEKDEKG--NEESVIYRILCPDGVIGSVIGKSGKV 58
M +SGKR R QRD D D NQKR KD+KG N+ ++YRILCPDGVIGSVIGKSGKV
Sbjct: 1 MVESGKRSRPQRDYDGDTNNQKR---HKDDKGTNNDGLIVYRILCPDGVIGSVIGKSGKV 57
Query: 59 INSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKV 118
INSIR E+RARVKVVDPFPGAKDR++TIY H+K+KEDV+VDD+FN PLCAAQDALLKV
Sbjct: 58 INSIRHESRARVKVVDPFPGAKDRIITIYCHIKEKEDVDVDDDFNHTNPLCAAQDALLKV 117
Query: 119 HAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPK 178
HAAI+NAVA+ D+DK+ ++KEECQILVP+SQSANIIGKAGATIKRLRSKTRTSIK+ K
Sbjct: 118 HAAISNAVASLGDSDKRLRDKEECQILVPASQSANIIGKAGATIKRLRSKTRTSIKIIAK 177
Query: 179 DASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSII 238
D+++PTHSCAM+FDNF+LI+GESEAVKKALFA+SAIMYKF+P+E+IPLE TV E PPSII
Sbjct: 178 DSTDPTHSCAMDFDNFLLITGESEAVKKALFAVSAIMYKFNPKEEIPLEATVPEPPPSII 237
Query: 239 IPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSG 298
IPSDVPIY PGG YPNA+PI+ SRSVP ILGA +P+LQGY D G++WPVY++ L +V
Sbjct: 238 IPSDVPIYQPGGFYPNAEPIVSSRSVPPILGATHIPELQGYGDMGSSWPVYTSTLPVVPS 297
Query: 299 LVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
S+ EEL+IRVLCPF+KIGRVIGKGG TIKSIRQASGA+I+VDDTK +RDEC+ITVT
Sbjct: 298 FGNVSRYEELIIRVLCPFDKIGRVIGKGGSTIKSIRQASGARIEVDDTKADRDECIITVT 357
Query: 359 AIE 361
A E
Sbjct: 358 ATE 360
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 144/346 (41%), Gaps = 55/346 (15%)
Query: 301 GASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTA- 359
G + +V R+LCP IG VIGK G I SIR S A++ V D + +IT+
Sbjct: 29 GTNNDGLIVYRILCPDGVIGSVIGKSGKVINSIRHESRARVKVVDPFPGAKDRIITIYCH 88
Query: 360 -----------IESPDDIKSMAVEAVLLLQTKIN-------DEDD---DTVTIRLLVSSK 398
+ + A +A+L + I+ D D D ++LV +
Sbjct: 89 IKEKEDVDVDDDFNHTNPLCAAQDALLKVHAAISNAVASLGDSDKRLRDKEECQILVPAS 148
Query: 399 VIGCIIGKSGSIINEIRKRTKADVRISKGDKP----KCADANDELVEVVGEVGSVRDALV 454
IIGK+G+ I +R +T+ ++I D CA D + + GE +V+ AL
Sbjct: 149 QSANIIGKAGATIKRLRSKTRTSIKIIAKDSTDPTHSCAMDFDNFLLITGESEAVKKALF 208
Query: 455 QIILRLRDDALKDRDGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSG 514
+ + + P+ A + + +P P G+ A+
Sbjct: 209 AV-----SAIMYKFNPKEEIPLEA----TVPEPPPSIIIPSDVPIYQPGGFYPNAEPIVS 259
Query: 515 -------IGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKL-----YGGLP--PPLTLEVLV 560
+G L GYG + S Y+S L +G + L + VL
Sbjct: 260 SRSVPPILGATHIPELQGYGDMG------SSWPVYTSTLPVVPSFGNVSRYEELIIRVLC 313
Query: 561 PANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGT 606
P + +G+VIGK GS + +IR+ SGA IE+ D+K+ R + + ++ T
Sbjct: 314 PFDKIGRVIGKGGSTIKSIRQASGARIEVDDTKADRDECIITVTAT 359
>gi|115475229|ref|NP_001061211.1| Os08g0200400 [Oryza sativa Japonica Group]
gi|38636959|dbj|BAD03220.1| putative KH domain protein [Oryza sativa Japonica Group]
gi|113623180|dbj|BAF23125.1| Os08g0200400 [Oryza sativa Japonica Group]
gi|215695475|dbj|BAG90642.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 441
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 237/445 (53%), Positives = 313/445 (70%), Gaps = 13/445 (2%)
Query: 189 MEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPP 248
M FDNFV I+G++ AV+KALFA+S I+YK +E IPLET+V + PPSII+PS++P+YP
Sbjct: 1 MSFDNFVQITGDARAVRKALFAVSTIIYKCPSKETIPLETSVSDLPPSIIVPSELPVYPS 60
Query: 249 GGLYPNADPILPS-RSVPSILGAA-RVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSE 306
Y +D + S SILG+ VP+L AD + P+Y + L ++ S
Sbjct: 61 SNFYSPSDAAISSGHPSLSILGSTPHVPELTVSADAHSRLPIYQSVLPVIPAYNTPKCSG 120
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
ELV+RVLCP KIG VIGKGG TIKSIR+ SGA+IDVDD+K++R+E +IT+T+ E+ DD
Sbjct: 121 ELVLRVLCPAGKIGLVIGKGGVTIKSIRKESGARIDVDDSKNDREESIITITSNEATDDA 180
Query: 367 KSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISK 426
KS AVEAVLLLQ+KIND+++ + +RLLV KVIGC+IGK GSI+N++R +TKA + ISK
Sbjct: 181 KSAAVEAVLLLQSKINDDNEGKMNLRLLVPGKVIGCLIGKGGSIVNDMRSKTKAAIYISK 240
Query: 427 GDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPP-------VGAD 479
G+KP+ A ++DELVEV GEV ++RDALVQI+LRLRDD L+D +N D
Sbjct: 241 GEKPRKASSSDELVEVFGEVENLRDALVQIVLRLRDDVLRDSVDRQNSEKDGKLTVATTD 300
Query: 480 HIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSM 539
+Y+S +P LLP + PLGYD R D G+ + SSLYGY SL D Y ++
Sbjct: 301 PLYAS--SYPLPALLPYRQQITPLGYDHRGDIERGLEVYPHSSLYGYSSLQAIDDGYSAV 358
Query: 540 SSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDR 599
SSY+SK YGG PP +E+ +PA+ + KV+GK G+NL NI KISGA IE+ +SKSSR
Sbjct: 359 SSYASKGYGGRPP--HMEMTIPASGLSKVMGKHGTNLDNIIKISGAHIEIIESKSSRHGH 416
Query: 600 VALISGTPEQKRAAENLIQAFIMAT 624
VA ISGT EQK++AENLI+AFIM+T
Sbjct: 417 VARISGTTEQKQSAENLIKAFIMST 441
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 154/342 (45%), Gaps = 62/342 (18%)
Query: 37 VIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDV 96
++ R+LCP G IG VIGK G I SIR+E+ AR+ V D ++ ++TI S+
Sbjct: 122 LVLRVLCPAGKIGLVIGKGGVTIKSIRKESGARIDVDDSKNDREESIITITSN------- 174
Query: 97 EVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIG 156
E D+ AA +A+L + + I + DN+ K ++LVP +IG
Sbjct: 175 EATDDAK-----SAAVEAVLLLQSKIND------DNEGKMN----LRLLVPGKVIGCLIG 219
Query: 157 KAGATIKRLRSKTRTSIKVT----PKDASEPTHSCAMEFDNFVLISGESEAVKKALFAIS 212
K G+ + +RSKT+ +I ++ P+ AS D V + GE E ++ AL I
Sbjct: 220 KGGSIVNDMRSKTKAAIYISKGEKPRKASSS--------DELVEVFGEVENLRDALVQIV 271
Query: 213 AIMYKFSPREDIPLETTVR---EAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILG 269
+ R+D+ ++ R E + + + P+Y YP +LP R + LG
Sbjct: 272 LRL-----RDDVLRDSVDRQNSEKDGKLTVATTDPLY--ASSYP-LPALLPYRQQITPLG 323
Query: 270 AARVPD------------LQGYADTGNTWPVYSTGLSLVS-GLVGASQSEELVIRVLCPF 316
D L GY+ YS S S G G E+ I P
Sbjct: 324 YDHRGDIERGLEVYPHSSLYGYSSLQAIDDGYSAVSSYASKGYGGRPPHMEMTI----PA 379
Query: 317 NKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
+ + +V+GK G + +I + SGA I++ ++K +R V ++
Sbjct: 380 SGLSKVMGKHGTNLDNIIKISGAHIEIIESKSSRHGHVARIS 421
>gi|148905782|gb|ABR16055.1| unknown [Picea sitchensis]
Length = 650
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 271/644 (42%), Positives = 396/644 (61%), Gaps = 38/644 (5%)
Query: 4 SGKRYRSQRD----NDRDGKNQKRRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVI 59
SGKR R++ D NDR+ + E+ G +S +YRILCP VIGSVIGK GKVI
Sbjct: 6 SGKRTRTEHDLAENNDRNKRRNSGTGREQTMPG-ADSTVYRILCPSNVIGSVIGKGGKVI 64
Query: 60 NSIRQETRARVKVVDPFPGAKDRVVTIYSH-VKDKEDVEVDDEFNDKEPLCAAQDALLKV 118
S+RQETR++++V D PG +RV+ I+S + ++ + DD+ N+ EP+C AQD LL+V
Sbjct: 65 KSMRQETRSKIRVADAVPGVDERVIVIFSSPLSKDKEKDDDDDDNENEPVCPAQDGLLRV 124
Query: 119 HAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPK 178
H+ I ++ DND +K ++ ++LV +SQ ++IGK G I++LRS++ I++ K
Sbjct: 125 HSVIVQE-SSGKDNDADKKRPQDARLLVANSQIGSLIGKGGNNIQKLRSESGAQIQIPRK 183
Query: 179 DASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSII 238
D CA FD V+ISG++ AVKKAL+A+SA ++K P+E IP + E S +
Sbjct: 184 DE---LPGCAFSFDELVVISGDAAAVKKALYAVSAFLFKHPPKEQIPWSVILPETNQSSL 240
Query: 239 IPSDVPIYPPGGLYPNADPILPSRSVPS-ILG-AARVPDLQGY-ADTGNTWPVYSTGLSL 295
PS VP +PP P D + ++ + ILG A+R+P L GY ++ G+ WP+ + L
Sbjct: 241 PPSGVPTFPPANYLPQGDSLFGHHNLSAPILGYASRLPGLGGYGSEAGSAWPLSNPALPS 300
Query: 296 VSGLVGASQ---SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDE 352
S ++ SEE IRVLCP +KIG VIGKGG TIKS+R +GA I V+D + DE
Sbjct: 301 FSKFGNSTTKKTSEEFSIRVLCPNDKIGGVIGKGGNTIKSMRNDTGASIRVEDAQTESDE 360
Query: 353 CVITVTAIESPDDIKSMAVEAVLLLQTKIN--DEDDDTVTIRLLVSSKVIGCIIGKSGSI 410
VI V+A E DD S +EAVLLLQ K + + D ++ R LV SK IGC++GK G+I
Sbjct: 361 RVIVVSATELADDRVSPTIEAVLLLQGKTSGTTDKDGAISTRFLVPSKHIGCLLGKGGNI 420
Query: 411 INEIRKRTKADVRISKGD-KPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRD 469
I+E+RK+T+A++RI + D +P C N+ELV+V GE G +DAL+QI+ RLR++ KD+D
Sbjct: 421 ISEMRKQTRANIRIFRKDERPICVSENEELVQVTGEPGVAKDALIQILKRLRENIFKDKD 480
Query: 470 GSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSL 529
G+ N D + + +S+P +P G YD + G+ I S++ L G+G+L
Sbjct: 481 GASN----TDSVLPL-SSLSVPSAVPLSSSYGTRKYDIVSPRGA-IAGRSAAGLSGFGAL 534
Query: 530 SMGDSPYGSMSSYSSK------LYGG-----LPPPLTLEVLVPANAVGKVIGKAGSNLAN 578
G Y S+ Y+ L GG L P + E +P +AV V+G+ GSN+++
Sbjct: 535 QAGTGSYASLQPYAPTRTFGIGLSGGHLNSSLAP--SHEFAIPNSAVSSVLGRGGSNISH 592
Query: 579 IRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFIM 622
IR+ISGAT+++ D + DRV ISGTPEQ AA++LIQAF++
Sbjct: 593 IREISGATVKLRDPITGASDRVVEISGTPEQSHAAQSLIQAFML 636
>gi|218200638|gb|EEC83065.1| hypothetical protein OsI_28176 [Oryza sativa Indica Group]
gi|222640076|gb|EEE68208.1| hypothetical protein OsJ_26373 [Oryza sativa Japonica Group]
Length = 431
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 233/445 (52%), Positives = 307/445 (68%), Gaps = 23/445 (5%)
Query: 189 MEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPP 248
M FDNFV I+G++ AV+KALFA+S I+YK +E IPLET+V + PPSII+PS++P+YP
Sbjct: 1 MSFDNFVQITGDARAVRKALFAVSTIIYKCPSKETIPLETSVSDLPPSIIVPSELPVYPS 60
Query: 249 GGLYPNADPILPS-RSVPSILGAA-RVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSE 306
Y +D + S SILG+ VP+L AD + P+Y + L ++ S
Sbjct: 61 SNFYSPSDAAISSGHPSLSILGSTPHVPELTVSADAHSRLPIYQSVLPVIPAYNTPKCSG 120
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
ELV+RVLCP KIG VIGKGG TIKSIR+ SGA+IDVDD+K++R+E +IT+T+ E+ DD
Sbjct: 121 ELVLRVLCPAGKIGLVIGKGGVTIKSIRKESGARIDVDDSKNDREESIITITSNEATDDA 180
Query: 367 KSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISK 426
KS AVEAVLLLQ+KIND+++ KVIGC+IGK GSI+N++R +TKA + ISK
Sbjct: 181 KSAAVEAVLLLQSKINDDNE----------GKVIGCLIGKGGSIVNDMRSKTKAAIYISK 230
Query: 427 GDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPP-------VGAD 479
G+KP+ A ++DELVEV GEV ++RDALVQI+LRLRDD L+D +N D
Sbjct: 231 GEKPRKASSSDELVEVFGEVENLRDALVQIVLRLRDDVLRDSVDRQNSEKDGKLTVATTD 290
Query: 480 HIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSM 539
+Y+S +P LLP + PLGYD R D G+ + SSLYGY SL D Y ++
Sbjct: 291 PLYAS--SYPLPALLPYRQQITPLGYDHRGDIERGLEVYPHSSLYGYSSLQAIDDGYSAV 348
Query: 540 SSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDR 599
SSY+SK YGG PP +E+ +PA+ + KV+GK G+NL NI KISGA IE+ +SKSSR
Sbjct: 349 SSYASKGYGGRPP--HMEMTIPASGLSKVMGKHGTNLDNIIKISGAHIEIIESKSSRHGH 406
Query: 600 VALISGTPEQKRAAENLIQAFIMAT 624
VA ISGT EQK++AENLI+AFIM+T
Sbjct: 407 VARISGTTEQKQSAENLIKAFIMST 431
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 148/342 (43%), Gaps = 72/342 (21%)
Query: 37 VIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDV 96
++ R+LCP G IG VIGK G I SIR+E+ AR+ V D ++ ++TI S+
Sbjct: 122 LVLRVLCPAGKIGLVIGKGGVTIKSIRKESGARIDVDDSKNDREESIITITSN------- 174
Query: 97 EVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIG 156
E D+ AA +A+L + + I ND + C +IG
Sbjct: 175 EATDDAK-----SAAVEAVLLLQSKI---------NDDNEGKVIGC-----------LIG 209
Query: 157 KAGATIKRLRSKTRTSIKVT----PKDASEPTHSCAMEFDNFVLISGESEAVKKALFAIS 212
K G+ + +RSKT+ +I ++ P+ AS D V + GE E ++ AL I
Sbjct: 210 KGGSIVNDMRSKTKAAIYISKGEKPRKASSS--------DELVEVFGEVENLRDALVQIV 261
Query: 213 AIMYKFSPREDIPLETTVR---EAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILG 269
+ R+D+ ++ R E + + + P+Y YP +LP R + LG
Sbjct: 262 LRL-----RDDVLRDSVDRQNSEKDGKLTVATTDPLY--ASSYP-LPALLPYRQQITPLG 313
Query: 270 AARVPD------------LQGYADTGNTWPVYSTGLSLVS-GLVGASQSEELVIRVLCPF 316
D L GY+ YS S S G G E+ I P
Sbjct: 314 YDHRGDIERGLEVYPHSSLYGYSSLQAIDDGYSAVSSYASKGYGGRPPHMEMTI----PA 369
Query: 317 NKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
+ + +V+GK G + +I + SGA I++ ++K +R V ++
Sbjct: 370 SGLSKVMGKHGTNLDNIIKISGAHIEIIESKSSRHGHVARIS 411
>gi|255557235|ref|XP_002519648.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223541065|gb|EEF42621.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 462
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 228/318 (71%), Positives = 265/318 (83%), Gaps = 4/318 (1%)
Query: 311 RVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDV--DDTKDNRDECVITV-TAIESPDDIK 367
R+L P ++ +IGK G TIK +R + A I V D D C + I SPDD+K
Sbjct: 145 RILVPSSQSANIIGKAGTTIKKLRSKTRATIKVTPKDASDPTHSCAMDFDNFIMSPDDLK 204
Query: 368 SMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKG 427
SMAVEA+LLLQ KINDEDDDTV+IRLLV KVIGCIIGKSGSIINEIR+RTKAD+RISKG
Sbjct: 205 SMAVEAILLLQGKINDEDDDTVSIRLLVPCKVIGCIIGKSGSIINEIRRRTKADIRISKG 264
Query: 428 DKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSGTG 487
KPKCAD++DELVEV+GEVGSVRDALVQI+LRLRDDALK++DGS NP VGAD +YS G+G
Sbjct: 265 QKPKCADSSDELVEVLGEVGSVRDALVQIVLRLRDDALKEKDGSHNPSVGADPLYSGGSG 324
Query: 488 ISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPY-GSMSSYSSKL 546
IS+P LL S+PPV PL YDQR ++GSG+G+LSSS+LYGYGSL+MGD+ Y S SSKL
Sbjct: 325 ISVPSLLSSVPPVTPLAYDQRPETGSGLGLLSSSNLYGYGSLTMGDNGYDSMSSYSSSKL 384
Query: 547 YGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGT 606
YGGLPPP TLE+LVPANAVGKV+GK G+N+ANIRKISGA IE+SD+KS+RGDR+A ISGT
Sbjct: 385 YGGLPPPSTLEMLVPANAVGKVLGKGGANIANIRKISGAMIEISDAKSARGDRIAHISGT 444
Query: 607 PEQKRAAENLIQAFIMAT 624
PEQKRAAENLIQAFIMAT
Sbjct: 445 PEQKRAAENLIQAFIMAT 462
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 149/198 (75%), Positives = 177/198 (89%), Gaps = 2/198 (1%)
Query: 1 MGDSGKRYRSQRDN-DRDGKNQKRRINEKDEKGN-EESVIYRILCPDGVIGSVIGKSGKV 58
MG+ GKR R QRD+ D D KNQKRR+N+KDE+GN +E V YRILCPD VIGSVIGK+GKV
Sbjct: 1 MGEGGKRNRLQRDHHDGDNKNQKRRVNDKDERGNNDELVAYRILCPDEVIGSVIGKNGKV 60
Query: 59 INSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKV 118
INSIRQETRA+VKVVDPFPG DRV+TIY +VK KEDVE+DDEF+D +P CAAQDALL+V
Sbjct: 61 INSIRQETRAKVKVVDPFPGPNDRVITIYCYVKKKEDVELDDEFHDHQPFCAAQDALLRV 120
Query: 119 HAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPK 178
H+AI+NAV++ D+D+K K+KEEC+ILVPSSQSANIIGKAG TIK+LRSKTR +IKVTPK
Sbjct: 121 HSAISNAVSSVLDSDRKMKDKEECRILVPSSQSANIIGKAGTTIKKLRSKTRATIKVTPK 180
Query: 179 DASEPTHSCAMEFDNFVL 196
DAS+PTHSCAM+FDNF++
Sbjct: 181 DASDPTHSCAMDFDNFIM 198
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 97/348 (27%), Positives = 149/348 (42%), Gaps = 53/348 (15%)
Query: 23 RRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDR 82
R++ +K+E RIL P ++IGK+G I +R +TRA +KV KD
Sbjct: 136 RKMKDKEE--------CRILVPSSQSANIIGKAGTTIKKLRSKTRATIKVT-----PKDA 182
Query: 83 VVTIYSHVKDKEDVEVD-DEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEE 141
+S D ++ + D+ A +A+L + I N D+D
Sbjct: 183 SDPTHSCAMDFDNFIMSPDDLK-----SMAVEAILLLQGKI-----NDEDDDT-----VS 227
Query: 142 CQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGES 201
++LVP IIGK+G+ I +R +T+ I+++ +P CA D V + GE
Sbjct: 228 IRLLVPCKVIGCIIGKSGSIINEIRRRTKADIRISK--GQKP--KCADSSDELVEVLGEV 283
Query: 202 EAVKKALFAISAIMYKFSPREDIPLETTVREAPP------SIIIPSDVPIYPPGGLYPNA 255
+V+ AL I + + +E A P I +PS + PP + P A
Sbjct: 284 GSVRDALVQIVLRLRDDALKEKDGSHNPSVGADPLYSGGSGISVPSLLSSVPP--VTPLA 341
Query: 256 DPILPSRSVPSILGAARVPDLQGYA-----DTGNTWPVYSTGLSLVSGLVGASQSEELVI 310
P S LG +L GY D G + L GL S E LV
Sbjct: 342 YDQRPE--TGSGLGLLSSSNLYGYGSLTMGDNGYDSMSSYSSSKLYGGLPPPSTLEMLV- 398
Query: 311 RVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
P N +G+V+GKGG I +IR+ SGA I++ D K R + + ++
Sbjct: 399 ----PANAVGKVLGKGGANIANIRKISGAMIEISDAKSARGDRIAHIS 442
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 77/152 (50%), Gaps = 31/152 (20%)
Query: 304 QSEELV-IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTA-IE 361
++ELV R+LCP IG VIGK G I SIRQ + A++ V D ++ VIT+ ++
Sbjct: 34 NNDELVAYRILCPDEVIGSVIGKNGKVINSIRQETRAKVKVVDPFPGPNDRVITIYCYVK 93
Query: 362 SPDDIK-------------------------SMAVEAVLLLQTKINDEDDDTVTIRLLVS 396
+D++ S AV +VL K+ D+++ R+LV
Sbjct: 94 KKEDVELDDEFHDHQPFCAAQDALLRVHSAISNAVSSVLDSDRKMKDKEE----CRILVP 149
Query: 397 SKVIGCIIGKSGSIINEIRKRTKADVRISKGD 428
S IIGK+G+ I ++R +T+A ++++ D
Sbjct: 150 SSQSANIIGKAGTTIKKLRSKTRATIKVTPKD 181
>gi|148909250|gb|ABR17725.1| unknown [Picea sitchensis]
Length = 435
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 187/435 (42%), Positives = 268/435 (61%), Gaps = 18/435 (4%)
Query: 4 SGKRYRSQRD----NDRDGKNQKRRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVI 59
SGKR R++ D NDR+ + E+ G +S +YRILCP VIGSVIGK GKVI
Sbjct: 6 SGKRTRTEHDLAENNDRNKRRNSGTGREQTMPG-ADSTVYRILCPSNVIGSVIGKGGKVI 64
Query: 60 NSIRQETRARVKVVDPFPGAKDRVVTIYSH-VKDKEDVEVDDEFNDKEPLCAAQDALLKV 118
S+RQETR++++V D PG +RV+ I+S + ++ + DD+ N+ EP+C AQD LL+V
Sbjct: 65 KSMRQETRSKIRVADAVPGVDERVIVIFSSPLSKDKEKDDDDDDNENEPVCPAQDGLLRV 124
Query: 119 HAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPK 178
H+ I ++ DND +K ++ ++LV +SQ ++IGK G I++LRS++ I++ K
Sbjct: 125 HSVIVQE-SSGKDNDADKKRPQDARLLVANSQIGSLIGKGGNNIQKLRSESGAQIQIPRK 183
Query: 179 DASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSII 238
D CA FD V+ISG++ AVKKAL+A+SA ++K P+E IP + E S +
Sbjct: 184 DE---LPGCAFSFDELVVISGDAAAVKKALYAVSAFLFKHPPKEQIPWSVILPETNQSSL 240
Query: 239 IPSDVPIYPPGGLYPNADPILPSRSVPS-ILG-AARVPDLQGY-ADTGNTWPVYSTGLSL 295
PS VP +PP P D + ++ + ILG A+R+P L GY ++ G+ WP+ + L
Sbjct: 241 PPSGVPTFPPANYLPQGDSLFGHHNLSAPILGYASRLPGLGGYGSEAGSAWPLSNPALPS 300
Query: 296 VSGLVGASQ---SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDE 352
S ++ SEE IRVLCP +KIG VIGKGG TIKS+R +GA I V+D + DE
Sbjct: 301 FSKFGNSTTKKTSEEFSIRVLCPNDKIGGVIGKGGNTIKSMRNDTGASIRVEDAQTESDE 360
Query: 353 CVITVTAIESPDDIKSMAVEAVLLLQTKIN--DEDDDTVTIRLLVSSKVIGCIIGKSGSI 410
VI V+A E DD S +EAVLLLQ K + + D ++ R LV SK IGC++GK G+I
Sbjct: 361 RVIVVSATELADDRVSPTIEAVLLLQGKTSGTTDKDGAISTRFLVPSKHIGCLLGKGGNI 420
Query: 411 INEIRKRTKADVRIS 425
I+E+R + IS
Sbjct: 421 ISEMRANSSKYSHIS 435
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 100/341 (29%), Positives = 159/341 (46%), Gaps = 50/341 (14%)
Query: 305 SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIE--- 361
++ V R+LCP N IG VIGKGG IKS+RQ + ++I V D DE VI + +
Sbjct: 39 ADSTVYRILCPSNVIGSVIGKGGKVIKSMRQETRSKIRVADAVPGVDERVIVIFSSPLSK 98
Query: 362 ----------------SPDDIKSMAVEAVLLLQTKINDEDDDT---VTIRLLVSSKVIGC 402
P + V +V++ ++ D D D RLLV++ IG
Sbjct: 99 DKEKDDDDDDNENEPVCPAQDGLLRVHSVIVQESSGKDNDADKKRPQDARLLVANSQIGS 158
Query: 403 IIGKSGSIINEIRKRTKADVRISKGDK-PKCADANDELVEVVGEVGSVRDALVQIILRLR 461
+IGK G+ I ++R + A ++I + D+ P CA + DELV + G+ +V+ AL + L
Sbjct: 159 LIGKGGNNIQKLRSESGAQIQIPRKDELPGCAFSFDELVVISGDAAAVKKALYAVSAFLF 218
Query: 462 DDALKDRDGSRNPPVGADHIYSSGTGISMPPL-LPSIPPVGPLGYDQRADSGSGIGMLSS 520
K++ + I S+PP +P+ PP Y + DS G LS+
Sbjct: 219 KHPPKEQ-------IPWSVILPETNQSSLPPSGVPTFPPA---NYLPQGDSLFGHHNLSA 268
Query: 521 SSLYGYGSLSMGDSPYG---------------SMSSYSSKLYGGLPPPLTLEVLVPANAV 565
L GY S G YG S S + + ++ VL P + +
Sbjct: 269 PIL-GYASRLPGLGGYGSEAGSAWPLSNPALPSFSKFGNSTTKKTSEEFSIRVLCPNDKI 327
Query: 566 GKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGT 606
G VIGK G+ + ++R +GA+I + D+++ +RV ++S T
Sbjct: 328 GGVIGKGGNTIKSMRNDTGASIRVEDAQTESDERVIVVSAT 368
>gi|359488265|ref|XP_003633728.1| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
vinifera]
gi|296087281|emb|CBI33655.3| unnamed protein product [Vitis vinifera]
Length = 676
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 218/634 (34%), Positives = 335/634 (52%), Gaps = 68/634 (10%)
Query: 16 RDGKNQKRRINEKDEK---GNEE--SVIYRILCPDGVIGSVIGKSGKVINSIRQETRARV 70
R G N++ R N + GN + +YRILCP IG VIGK G ++ ++R+ET+A++
Sbjct: 19 RKGSNKRGRWNNSSHEQSFGNSQVADTVYRILCPSKKIGGVIGKGGGIVKALREETQAKI 78
Query: 71 KVVDPFPGAKDRVVTIYS-------HVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAI- 122
V D PG+ +RV+ IYS ED E+++E + EP C AQDAL+KVH I
Sbjct: 79 TVADSVPGSDERVIIIYSAPTKNPKEHDSNEDPEMEEEQDHMEPHCPAQDALMKVHERII 138
Query: 123 -ANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+ D ++LVP++ ++GK G I+RLRS+T +I+V P +
Sbjct: 139 EEDLFGGTEFEDDNENTVVTARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLP---A 195
Query: 182 EPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPS 241
E +CAM D V ISG+ KKAL+ +S ++++ +PR+D P PS
Sbjct: 196 EHLPTCAMSSDELVQISGKPAVAKKALYEVSTLLHQ-NPRKDKP--------------PS 240
Query: 242 DVPI-------YPPGG----LYPNADPILPSRSVPSILGAARVPDLQGYADTGNTWPVYS 290
P+ +PPG + P +P+ +R+ S G +P + GY + P
Sbjct: 241 SFPMSFGGQGFHPPGASMGNMPPPGNPMWSNRNSNS-QGVPPMPWMGGYRSQPSVVP--- 296
Query: 291 TGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNR 350
G V G S E +++LCP KIG VIGKGG +K ++Q +GA I V+D
Sbjct: 297 GGFDGVHAGHGGEASGEFSMKILCPAGKIGGVIGKGGFNVKQLQQETGASIHVEDALAES 356
Query: 351 DECVITVTAIESPDDIKSMAVEAVLLLQTKIND-EDDDTVTIRLLVSSKVIGCIIGKSGS 409
+E VI V++ E+ + +S +EA+L LQ K ++ D +T RLLV S +GCI+G+ G
Sbjct: 357 EERVIRVSSFEALWNPRSQTIEAILQLQNKTSEYSDKGGMTTRLLVPSSKVGCILGQGGH 416
Query: 410 IINEIRKRTKADVRI-SKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDR 468
+INE+R+RT+AD+R+ SK DKPKCA ++ELV++ G G +DAL +I RLR L+D
Sbjct: 417 VINEMRRRTQADIRVYSKEDKPKCASDDEELVQISGNFGVAKDALAEIASRLRVRCLRDA 476
Query: 469 DGSRNP-PVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYG 527
+G P PVG + G +P LPS G + G G+ Y
Sbjct: 477 NGGVEPAPVGP--VPGFGHPGKLPGGLPSSSGALGAGSSGGFELSKGGGLEYEPQSYPVP 534
Query: 528 SLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATI 587
+ G Y +++S ++E +P N+V VIG G N+AN+ +++GA +
Sbjct: 535 PAATG---YHNVNS-------------SMESKIPNNSVSSVIGMGGGNVANMSEMAGARV 578
Query: 588 EMSDSKSSRGDRVALISGTPEQKRAAENLIQAFI 621
++ D +S + V I G+ E AA++++QAF+
Sbjct: 579 KLQDPQSGGSECVVEIRGSSEHLTAAQSILQAFM 612
>gi|147790774|emb|CAN72739.1| hypothetical protein VITISV_027256 [Vitis vinifera]
Length = 668
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 218/634 (34%), Positives = 334/634 (52%), Gaps = 68/634 (10%)
Query: 16 RDGKNQKRRINEKDEK---GNEE--SVIYRILCPDGVIGSVIGKSGKVINSIRQETRARV 70
R G N++ R N + GN + +YRILCP IG VIGK G ++ ++R+ET+A++
Sbjct: 47 RKGSNKRGRWNNSSHEQSFGNSQVADTVYRILCPSKKIGGVIGKGGGIVKALREETQAKI 106
Query: 71 KVVDPFPGAKDRVVTIYS-------HVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAI- 122
V D PG+ +RV+ IYS ED E ++E + EP C AQDAL+KVH I
Sbjct: 107 TVADSVPGSDERVIIIYSAPTKNPKEHNSNEDPEREEEQDHMEPHCPAQDALMKVHERII 166
Query: 123 -ANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+ D ++LVP++ ++GK G I+RLRS+T +I+V P +
Sbjct: 167 EEDLFGGTEFEDDNENTVVTARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLP---A 223
Query: 182 EPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPS 241
E +CAM D V ISG+ KKAL+ +S ++++ +PR+D P PS
Sbjct: 224 EHLPTCAMSSDELVQISGKPAVAKKALYEVSTLLHQ-NPRKDKP--------------PS 268
Query: 242 DVPI-------YPPGG----LYPNADPILPSRSVPSILGAARVPDLQGYADTGNTWPVYS 290
P+ +PPG + P +P+ +R+ S G +P + GY + P
Sbjct: 269 SFPMSFGGQGFHPPGASMGNMPPPGNPMWSNRNSNS-QGVPPMPWMGGYRSQPSVVP--- 324
Query: 291 TGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNR 350
G V G S E +++LCP KIG VIGKGG +K ++Q +GA I V+D
Sbjct: 325 GGFDGVHAGHGGEASGEFSMKILCPAGKIGGVIGKGGFNVKQLQQETGASIHVEDALAES 384
Query: 351 DECVITVTAIESPDDIKSMAVEAVLLLQTKIND-EDDDTVTIRLLVSSKVIGCIIGKSGS 409
+E VI V++ E+ + +S +EA+L LQ K ++ D +T RLLV S +GCI+G+ G
Sbjct: 385 EERVIRVSSFEALWNPRSQTIEAILQLQNKTSEYSDKGGMTTRLLVPSSKVGCILGQGGH 444
Query: 410 IINEIRKRTKADVRI-SKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDR 468
+INE+R+RT+AD+R+ SK DKPKCA ++ELV++ G G +DAL +I RLR L+D
Sbjct: 445 VINEMRRRTQADIRVYSKEDKPKCASDDEELVQISGNFGVAKDALAEIASRLRVRCLRDA 504
Query: 469 DGSRNP-PVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYG 527
+G P PVG + G +P LPS G + G G+ Y
Sbjct: 505 NGGVEPAPVGP--VPGFGHPGKLPGGLPSSSGALGAGSSGGFELSKGGGLEYEPQSYPVP 562
Query: 528 SLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATI 587
+ G Y +++S ++E +P N+V VIG G N+AN+ +++GA +
Sbjct: 563 PAATG---YHNVNS-------------SMESKIPNNSVSSVIGMGGGNVANMSEMAGARV 606
Query: 588 EMSDSKSSRGDRVALISGTPEQKRAAENLIQAFI 621
++ D +S + V I G+ E AA++++QAF+
Sbjct: 607 KLQDPQSGGSECVVEIRGSSEHLTAAQSILQAFM 640
>gi|302803919|ref|XP_002983712.1| hypothetical protein SELMODRAFT_445677 [Selaginella moellendorffii]
gi|300148549|gb|EFJ15208.1| hypothetical protein SELMODRAFT_445677 [Selaginella moellendorffii]
Length = 668
Score = 269 bits (687), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 211/638 (33%), Positives = 322/638 (50%), Gaps = 95/638 (14%)
Query: 39 YRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH--------- 89
+RILCP IGSVIGK G +I ++RQ+T A++K+ D PG+ +RV+ I +
Sbjct: 62 FRILCPASRIGSVIGKGGSIIKTLRQQTGAKIKIADAIPGSDERVIIIGAFDAEGGGDED 121
Query: 90 -----------VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDND----- 133
DK+D +D+ N ++ C AQ AL KVH+ I +A D D
Sbjct: 122 YPAGSGGGSAAALDKDDRAMDEYTNGRDVACPAQLALFKVHSRILDADKYEDDLDDSDSV 181
Query: 134 -KKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFD 192
+ EK ++LVP +Q ++GK G I+++R +T + I++ P+ E CA+ D
Sbjct: 182 EEDLSEKVVTRMLVPENQVGCLLGKKGRIIEQMREETGSQIRILPR---EQLPVCALPTD 238
Query: 193 NFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGL- 251
V + G+ +VK+AL AIS + +P +D P + + GG
Sbjct: 239 EVVQVVGDRPSVKRALNAISTRLLD-NPPKDRPSSASFQSGNFG------------GGSR 285
Query: 252 ---YPNADPILPSRSVPSILGAARVPDLQGYADTGN-----TWP---VYSTGLSLVSGLV 300
+P ++P +P + + R D G T P + TG LV
Sbjct: 286 SSGFPASEPYIPQHTSLAPQTRLRAEPRSDSGDNGYQLLRPTAPGLSEFGTGRHLV---- 341
Query: 301 GASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAI 360
EELV R+LCP KIG +IGK I+++++ +GA+I+V D +E VI V+A+
Sbjct: 342 --PMDEELVFRILCPSEKIGNIIGK---FIQTLQEETGAKINVPDAVPGCEERVIIVSAV 396
Query: 361 ESPDDIKSMAVEAVLLLQTKINDEDDDT---VTIRLLVSSKVIGCIIGKSGSIINEIRKR 417
ESPDD S A EAV +Q K+ D+ +T V RLLV S +GC++GK G+II+E+R
Sbjct: 397 ESPDDDLSPAQEAVFHIQDKLRDDGGETSERVVTRLLVPSNHVGCLLGKGGNIISEMRNS 456
Query: 418 TKADVRISKGDK-PKCADANDELVEVVGEVGSVRDALVQIILRLRDDALK---DRDGSRN 473
T+A +R+ ++ P CA NDE+V+V+GE+ RDALVQI RLR + + DR
Sbjct: 457 TRAIIRVLDREQLPLCALDNDEVVQVLGEIRVARDALVQITSRLRANLYREKTDRSDDYG 516
Query: 474 PPVGADHIYSSGTGISMPPLL--PSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSM 531
+ + G S PP + P PP L Q+ + G+ G+ +S G
Sbjct: 517 YQRSTSPLSNFGLQASQPPGIQAPRSPPSWLL---QQTERGAYNGLPRLTSYAGI----- 568
Query: 532 GDSPYGSMSSYSSKLYGGLPPPLT---------LEVLVPANAVGKVIGKAGSNLANIRKI 582
+ YG S+ LP LT ++VL+P V+G+ G NL I K+
Sbjct: 569 -ERSYGLAGDRSA-----LPTGLTNLSVVTSTKIDVLIPEVTFSAVLGQNGDNLTQISKM 622
Query: 583 SGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAF 620
SGA + ++D ++ GDR+ ISGTP+Q A+ +++AF
Sbjct: 623 SGAKVTLADGCTATGDRLIEISGTPDQTNIAKTVVEAF 660
>gi|302814720|ref|XP_002989043.1| hypothetical protein SELMODRAFT_10869 [Selaginella moellendorffii]
gi|300143144|gb|EFJ09837.1| hypothetical protein SELMODRAFT_10869 [Selaginella moellendorffii]
Length = 630
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 208/654 (31%), Positives = 324/654 (49%), Gaps = 98/654 (14%)
Query: 38 IYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH-------- 89
++RILCP IGSVIGK G +I ++RQ+T A++K+ D PG+ +RV+ I +
Sbjct: 1 LFRILCPASRIGSVIGKGGSIIKTLRQQTGAKIKIADAIPGSDERVIIIGAFDAEGGGDE 60
Query: 90 ------------VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDND---- 133
DK+D +D+ N ++ C AQ AL KVH+ I +A D D
Sbjct: 61 DYPAGSGGGAPAALDKDDRAMDEYTNGRDVACPAQLALFKVHSRILDADKYEDDLDDSDS 120
Query: 134 --KKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEF 191
+ EK ++LVP +Q ++GK G I+++R +T + I++ P+ E CA+
Sbjct: 121 VEEDLSEKVVTRMLVPENQVGCLLGKKGRIIEQMREETGSQIRILPR---EQLPVCALPT 177
Query: 192 DNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGL 251
D V + G+ +VK+AL AIS + +P +D P + + GG
Sbjct: 178 DEVVQVVGDRPSVKRALNAISTRLLD-NPPKDRPSSASFQSGNFG------------GGS 224
Query: 252 ----YPNADPILPSRSVPSILGAARVPDLQGYADTGN-----TWP---VYSTGLSLVSGL 299
+P ++P +P + + R D G T P + TG LV
Sbjct: 225 RSSGFPASEPYIPQHTSLAPQTRLRAEPRSDSGDNGYQLLRPTAPGLSEFGTGRHLV--- 281
Query: 300 VGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTA 359
EELV R+LCP KIG +IGK I+++++ +GA+I+V D +E VI V+A
Sbjct: 282 ---PMDEELVFRILCPSEKIGNIIGK---FIQTLQEETGAKINVPDAVPGCEERVIIVSA 335
Query: 360 IESPDDIKSMAVEAVLLLQTKINDEDDDT---VTIRLLVSSKVIGCIIGKSGSIINEIRK 416
+ESPDD S A EAV +Q K+ D+ +T V RLLV S +GC++GK G+II+E+R
Sbjct: 336 VESPDDDLSPAQEAVFHIQDKLRDDGGETSERVVTRLLVPSNHVGCLLGKGGNIISEMRN 395
Query: 417 RTKADVRISKGDK-PKCADANDELVEVVGEVGSVRDALVQIILRLRDDALK---DRDGSR 472
T+A +R+ ++ P CA NDE+V+V+GE+ RDALVQI RLR + + DR
Sbjct: 396 STRAIIRVLDREQLPLCALDNDEVVQVLGEIRVARDALVQITSRLRANLYREKTDRSDDY 455
Query: 473 NPPVGADHIYSSGTGISMPPLL--PSIPP--------VGPLGYDQR-------ADSGSGI 515
+ + G S PP + P PP + P + R D +
Sbjct: 456 GYQRSTSPLSNFGLQASQPPGIQAPRSPPSWLLQQVLIPPPSFKSRLTSFLPCLDRKRSL 515
Query: 516 GMLSSSS---------LYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVG 566
+++ G S + D PY S+S + + + ++VL+P
Sbjct: 516 QWFATAYKLCWNREKLWLGRRSFGLADWPY--QVSHSIQRHLSVVTSTKIDVLIPEVTFS 573
Query: 567 KVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAF 620
V+G+ G NL I K+SGA + ++D ++ GDR+ ISGTP+Q A+ +++AF
Sbjct: 574 AVLGQNGDNLTQISKMSGAKVTLADGCTATGDRLIEISGTPDQTNIAKTVVEAF 627
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 96/380 (25%), Positives = 160/380 (42%), Gaps = 75/380 (19%)
Query: 34 EESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDK 93
+E +++RILCP IG++I GK I ++++ET A++ V D PG ++RV+ I S V+
Sbjct: 284 DEELVFRILCPSEKIGNII---GKFIQTLQEETGAKINVPDAVPGCEERVI-IVSAVESP 339
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
+D L AQ+A+ + + D+ + E+ ++LVPS+
Sbjct: 340 DD-----------DLSPAQEAVFHIQDKL-------RDDGGETSERVVTRLLVPSNHVGC 381
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAIS- 212
++GK G I +R+ TR I+V + E CA++ D V + GE + AL I+
Sbjct: 382 LLGKGGNIISEMRNSTRAIIRVLDR---EQLPLCALDNDEVVQVLGEIRVARDALVQITS 438
Query: 213 ---AIMYK--------------FSPREDIPLETTVREAPPSIIIPSDVPIY-------PP 248
A +Y+ SP + L+ + PP I P P + PP
Sbjct: 439 RLRANLYREKTDRSDDYGYQRSTSPLSNFGLQAS---QPPGIQAPRSPPSWLLQQVLIPP 495
Query: 249 GGLYPNADPILPS----RSVPSILGAARVPDLQ----------GYADTGNTWPVYSTGLS 294
LP RS+ A ++ + G AD WP Y S
Sbjct: 496 PSFKSRLTSFLPCLDRKRSLQWFATAYKLCWNREKLWLGRRSFGLAD----WP-YQVSHS 550
Query: 295 LVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECV 354
+ L + ++ I VL P V+G+ G + I + SGA++ + D + +
Sbjct: 551 IQRHLSVVTSTK---IDVLIPEVTFSAVLGQNGDNLTQISKMSGAKVTLADGCTATGDRL 607
Query: 355 ITVTAIESPDDIKSMAVEAV 374
I ++ +I VEA
Sbjct: 608 IEISGTPDQTNIAKTVVEAF 627
Score = 40.0 bits (92), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 28 KDEKG-NEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVD 74
+D+ G E V+ R+L P +G ++GK G +I+ +R TRA ++V+D
Sbjct: 358 RDDGGETSERVVTRLLVPSNHVGCLLGKGGNIISEMRNSTRAIIRVLD 405
Score = 39.7 bits (91), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 31/44 (70%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV 73
E+ E V+ R+L P+ +G ++GK G++I +R+ET ++++++
Sbjct: 122 EEDLSEKVVTRMLVPENQVGCLLGKKGRIIEQMREETGSQIRIL 165
>gi|115482708|ref|NP_001064947.1| Os10g0495000 [Oryza sativa Japonica Group]
gi|22128716|gb|AAM92828.1| putative RNA-binding protein [Oryza sativa Japonica Group]
gi|110289325|gb|ABB47821.2| KH domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|113639556|dbj|BAF26861.1| Os10g0495000 [Oryza sativa Japonica Group]
gi|215694845|dbj|BAG90036.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 762
Score = 265 bits (678), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 171/499 (34%), Positives = 272/499 (54%), Gaps = 65/499 (13%)
Query: 3 DSGKRYRSQRDNDRDGKN----QKRRINEKDEKGNEES----VIYRILCPDGVIGSVIGK 54
D +R++S R N +++R+N + + G S IYRILCP IGSV+G+
Sbjct: 4 DRSRRHKSNTSRKRPHFNSDDGKRKRLNSRHDDGTISSEPIETIYRILCPVKKIGSVLGR 63
Query: 55 SGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVD---DEFNDKEPLCAA 111
G ++ ++R T+A+++V D PGA +RV+ I+++ E+ + D F D +P C A
Sbjct: 64 GGDIVKALRDTTKAKIRVADSIPGADERVIIIFNYSSQTEEAAQNISTDGFEDMKPHCFA 123
Query: 112 QDALLKVHAAIANAVANATDNDKKRKEKEE------CQILVPSSQSANIIGKAGATIKRL 165
QDALLK+H IA A+ + EK E +ILVP +Q ++GK G+ I++L
Sbjct: 124 QDALLKIHDKIA---ADEDLHAGIVHEKSENVDDVIARILVPGNQVGCLLGKGGSIIQQL 180
Query: 166 RSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIP 225
R+ T I+V P SE CA++ D V ISG S V+KAL+ IS +++ +++ P
Sbjct: 181 RNDTGAGIRVLP---SENLPQCALKSDELVQISGSSSLVRKALYEISTRLHQHPRKDNPP 237
Query: 226 LETTV-------REAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQG 278
LE + +APP + P+A+P+LP V + ++P L
Sbjct: 238 LEEIIDASTQRKHQAPPQL---------------PHANPMLPHLHVDH---SPQIPLLDP 279
Query: 279 YADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASG 338
Y + + ++++EE I++LC IG+VIGK GG ++ + Q +G
Sbjct: 280 YRNRPLQY--------------HSAEAEEFSIKILCASEHIGQVIGKSGGNVRQVEQQTG 325
Query: 339 AQIDVDDT-KDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKIND-EDDDTVTIRLLVS 396
A + V + K+ +E +I V++ E PDD S +EA++LL +K++ ++ +T RL+V
Sbjct: 326 ACVQVKEVGKNASEERLIVVSSQEIPDDPVSPTIEALILLHSKVSTLAENHHLTTRLVVP 385
Query: 397 SKVIGCIIGKSGSIINEIRKRTKADVRI-SKGDKPKCADANDELVEVVGEVGSVRDALVQ 455
S +GCIIG+ G +I E+R+RT A++R+ SK DKPK ++ELV+V G R AL +
Sbjct: 386 SNKVGCIIGEGGKVITEMRRRTGAEIRVYSKADKPKYLSFDEELVQVAGLPAIARGALTE 445
Query: 456 IILRLRDDALKDRDGSRNP 474
I RLR L+D S NP
Sbjct: 446 IASRLRTRTLRDGSSSNNP 464
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 97/351 (27%), Positives = 163/351 (46%), Gaps = 56/351 (15%)
Query: 302 ASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIE 361
+S+ E + R+LCP KIG V+G+GG +K++R + A+I V D+ DE VI +
Sbjct: 40 SSEPIETIYRILCPVKKIGSVLGRGGDIVKALRDTTKAKIRVADSIPGADERVIIIFNYS 99
Query: 362 SP-------------DDIK--SMAVEAVLLLQTKINDEDD-------------DTVTIRL 393
S +D+K A +A+L + KI ++D D V R+
Sbjct: 100 SQTEEAAQNISTDGFEDMKPHCFAQDALLKIHDKIAADEDLHAGIVHEKSENVDDVIARI 159
Query: 394 LVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDK-PKCADANDELVEVVGEVGSVRDA 452
LV +GC++GK GSII ++R T A +R+ + P+CA +DELV++ G VR A
Sbjct: 160 LVPGNQVGCLLGKGGSIIQQLRNDTGAGIRVLPSENLPQCALKSDELVQISGSSSLVRKA 219
Query: 453 LVQIILRLRDDALKDRDGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSG 512
L +I RL KD NPP+ S+ PP LP P+ P D
Sbjct: 220 LYEISTRLHQHPRKD-----NPPLEEIIDASTQRKHQAPPQLPHANPMLP---HLHVDHS 271
Query: 513 SGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKA 572
I +L + P S+ + + ++++L + +G+VIGK+
Sbjct: 272 PQIPLLDP----------YRNRPLQYHSAEAEEF--------SIKILCASEHIGQVIGKS 313
Query: 573 GSNLANIRKISGATIEMSD-SKSSRGDRVALISGTPEQKRAAENLIQAFIM 622
G N+ + + +GA +++ + K++ +R+ ++S I+A I+
Sbjct: 314 GGNVRQVEQQTGACVQVKEVGKNASEERLIVVSSQEIPDDPVSPTIEALIL 364
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 45/70 (64%)
Query: 555 TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAE 614
++E +P + + VIG G NLA IR+ISGA +++ ++ + + I G P+Q +AA+
Sbjct: 677 SVEFRIPNSYLESVIGAGGVNLAEIRQISGARVKLHEAHPGSSESIVEIQGIPDQVKAAQ 736
Query: 615 NLIQAFIMAT 624
+L+Q FI A+
Sbjct: 737 SLLQGFIGAS 746
>gi|125532489|gb|EAY79054.1| hypothetical protein OsI_34164 [Oryza sativa Indica Group]
gi|125575260|gb|EAZ16544.1| hypothetical protein OsJ_32017 [Oryza sativa Japonica Group]
Length = 769
Score = 265 bits (678), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 171/499 (34%), Positives = 272/499 (54%), Gaps = 65/499 (13%)
Query: 3 DSGKRYRSQRDNDRDGKN----QKRRINEKDEKGNEES----VIYRILCPDGVIGSVIGK 54
D +R++S R N +++R+N + + G S IYRILCP IGSV+G+
Sbjct: 11 DRSRRHKSNTSRKRPHFNSDDGKRKRLNSRHDDGTISSEPIETIYRILCPVKKIGSVLGR 70
Query: 55 SGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVD---DEFNDKEPLCAA 111
G ++ ++R T+A+++V D PGA +RV+ I+++ E+ + D F D +P C A
Sbjct: 71 GGDIVKALRDTTKAKIRVADSIPGADERVIIIFNYSSQTEEAAQNISTDGFEDMKPHCFA 130
Query: 112 QDALLKVHAAIANAVANATDNDKKRKEKEE------CQILVPSSQSANIIGKAGATIKRL 165
QDALLK+H IA A+ + EK E +ILVP +Q ++GK G+ I++L
Sbjct: 131 QDALLKIHDKIA---ADEDLHAGIVHEKSENVDDVIARILVPGNQVGCLLGKGGSIIQQL 187
Query: 166 RSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIP 225
R+ T I+V P SE CA++ D V ISG S V+KAL+ IS +++ +++ P
Sbjct: 188 RNDTGAGIRVLP---SENLPQCALKSDELVQISGSSSLVRKALYEISTRLHQHPRKDNPP 244
Query: 226 LETTV-------REAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQG 278
LE + +APP + P+A+P+LP V + ++P L
Sbjct: 245 LEEIIDASTQRKHQAPPQL---------------PHANPMLPHLHVDH---SPQIPLLDP 286
Query: 279 YADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASG 338
Y + + ++++EE I++LC IG+VIGK GG ++ + Q +G
Sbjct: 287 YRNRPLQY--------------HSAEAEEFSIKILCASEHIGQVIGKSGGNVRQVEQQTG 332
Query: 339 AQIDVDDT-KDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKIND-EDDDTVTIRLLVS 396
A + V + K+ +E +I V++ E PDD S +EA++LL +K++ ++ +T RL+V
Sbjct: 333 ACVQVKEVGKNASEERLIVVSSQEIPDDPVSPTIEALILLHSKVSTLAENHHLTTRLVVP 392
Query: 397 SKVIGCIIGKSGSIINEIRKRTKADVRI-SKGDKPKCADANDELVEVVGEVGSVRDALVQ 455
S +GCIIG+ G +I E+R+RT A++R+ SK DKPK ++ELV+V G R AL +
Sbjct: 393 SNKVGCIIGEGGKVITEMRRRTGAEIRVYSKADKPKYLSFDEELVQVAGLPAIARGALTE 452
Query: 456 IILRLRDDALKDRDGSRNP 474
I RLR L+D S NP
Sbjct: 453 IASRLRTRTLRDGSSSNNP 471
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 97/351 (27%), Positives = 163/351 (46%), Gaps = 56/351 (15%)
Query: 302 ASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIE 361
+S+ E + R+LCP KIG V+G+GG +K++R + A+I V D+ DE VI +
Sbjct: 47 SSEPIETIYRILCPVKKIGSVLGRGGDIVKALRDTTKAKIRVADSIPGADERVIIIFNYS 106
Query: 362 SP-------------DDIK--SMAVEAVLLLQTKINDEDD-------------DTVTIRL 393
S +D+K A +A+L + KI ++D D V R+
Sbjct: 107 SQTEEAAQNISTDGFEDMKPHCFAQDALLKIHDKIAADEDLHAGIVHEKSENVDDVIARI 166
Query: 394 LVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDK-PKCADANDELVEVVGEVGSVRDA 452
LV +GC++GK GSII ++R T A +R+ + P+CA +DELV++ G VR A
Sbjct: 167 LVPGNQVGCLLGKGGSIIQQLRNDTGAGIRVLPSENLPQCALKSDELVQISGSSSLVRKA 226
Query: 453 LVQIILRLRDDALKDRDGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSG 512
L +I RL KD NPP+ S+ PP LP P+ P D
Sbjct: 227 LYEISTRLHQHPRKD-----NPPLEEIIDASTQRKHQAPPQLPHANPMLP---HLHVDHS 278
Query: 513 SGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKA 572
I +L + P S+ + + ++++L + +G+VIGK+
Sbjct: 279 PQIPLLDP----------YRNRPLQYHSAEAEEF--------SIKILCASEHIGQVIGKS 320
Query: 573 GSNLANIRKISGATIEMSD-SKSSRGDRVALISGTPEQKRAAENLIQAFIM 622
G N+ + + +GA +++ + K++ +R+ ++S I+A I+
Sbjct: 321 GGNVRQVEQQTGACVQVKEVGKNASEERLIVVSSQEIPDDPVSPTIEALIL 371
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 45/70 (64%)
Query: 555 TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAE 614
++E +P + + VIG G NLA IR+ISGA +++ ++ + + I G P+Q +AA+
Sbjct: 684 SVEFRIPNSYLESVIGAGGVNLAEIRQISGARVKLHEAHPGSSESIVEIQGIPDQVKAAQ 743
Query: 615 NLIQAFIMAT 624
+L+Q FI A+
Sbjct: 744 SLLQGFIGAS 753
>gi|110289326|gb|AAP54423.2| KH domain containing protein, expressed [Oryza sativa Japonica
Group]
Length = 677
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 171/499 (34%), Positives = 272/499 (54%), Gaps = 65/499 (13%)
Query: 3 DSGKRYRSQRDNDRDGKN----QKRRINEKDEKGNEES----VIYRILCPDGVIGSVIGK 54
D +R++S R N +++R+N + + G S IYRILCP IGSV+G+
Sbjct: 4 DRSRRHKSNTSRKRPHFNSDDGKRKRLNSRHDDGTISSEPIETIYRILCPVKKIGSVLGR 63
Query: 55 SGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVD---DEFNDKEPLCAA 111
G ++ ++R T+A+++V D PGA +RV+ I+++ E+ + D F D +P C A
Sbjct: 64 GGDIVKALRDTTKAKIRVADSIPGADERVIIIFNYSSQTEEAAQNISTDGFEDMKPHCFA 123
Query: 112 QDALLKVHAAIANAVANATDNDKKRKEKEE------CQILVPSSQSANIIGKAGATIKRL 165
QDALLK+H IA A+ + EK E +ILVP +Q ++GK G+ I++L
Sbjct: 124 QDALLKIHDKIA---ADEDLHAGIVHEKSENVDDVIARILVPGNQVGCLLGKGGSIIQQL 180
Query: 166 RSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIP 225
R+ T I+V P SE CA++ D V ISG S V+KAL+ IS +++ +++ P
Sbjct: 181 RNDTGAGIRVLP---SENLPQCALKSDELVQISGSSSLVRKALYEISTRLHQHPRKDNPP 237
Query: 226 LETTV-------REAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQG 278
LE + +APP + P+A+P+LP V + ++P L
Sbjct: 238 LEEIIDASTQRKHQAPPQL---------------PHANPMLPHLHVDH---SPQIPLLDP 279
Query: 279 YADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASG 338
Y + + ++++EE I++LC IG+VIGK GG ++ + Q +G
Sbjct: 280 YRNRPLQY--------------HSAEAEEFSIKILCASEHIGQVIGKSGGNVRQVEQQTG 325
Query: 339 AQIDVDDT-KDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKIND-EDDDTVTIRLLVS 396
A + V + K+ +E +I V++ E PDD S +EA++LL +K++ ++ +T RL+V
Sbjct: 326 ACVQVKEVGKNASEERLIVVSSQEIPDDPVSPTIEALILLHSKVSTLAENHHLTTRLVVP 385
Query: 397 SKVIGCIIGKSGSIINEIRKRTKADVRI-SKGDKPKCADANDELVEVVGEVGSVRDALVQ 455
S +GCIIG+ G +I E+R+RT A++R+ SK DKPK ++ELV+V G R AL +
Sbjct: 386 SNKVGCIIGEGGKVITEMRRRTGAEIRVYSKADKPKYLSFDEELVQVAGLPAIARGALTE 445
Query: 456 IILRLRDDALKDRDGSRNP 474
I RLR L+D S NP
Sbjct: 446 IASRLRTRTLRDGSSSNNP 464
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 97/351 (27%), Positives = 163/351 (46%), Gaps = 56/351 (15%)
Query: 302 ASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIE 361
+S+ E + R+LCP KIG V+G+GG +K++R + A+I V D+ DE VI +
Sbjct: 40 SSEPIETIYRILCPVKKIGSVLGRGGDIVKALRDTTKAKIRVADSIPGADERVIIIFNYS 99
Query: 362 SP-------------DDIK--SMAVEAVLLLQTKINDEDD-------------DTVTIRL 393
S +D+K A +A+L + KI ++D D V R+
Sbjct: 100 SQTEEAAQNISTDGFEDMKPHCFAQDALLKIHDKIAADEDLHAGIVHEKSENVDDVIARI 159
Query: 394 LVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDK-PKCADANDELVEVVGEVGSVRDA 452
LV +GC++GK GSII ++R T A +R+ + P+CA +DELV++ G VR A
Sbjct: 160 LVPGNQVGCLLGKGGSIIQQLRNDTGAGIRVLPSENLPQCALKSDELVQISGSSSLVRKA 219
Query: 453 LVQIILRLRDDALKDRDGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSG 512
L +I RL KD NPP+ S+ PP LP P+ P D
Sbjct: 220 LYEISTRLHQHPRKD-----NPPLEEIIDASTQRKHQAPPQLPHANPMLP---HLHVDHS 271
Query: 513 SGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKA 572
I +L + P S+ + + ++++L + +G+VIGK+
Sbjct: 272 PQIPLLDP----------YRNRPLQYHSAEAEEF--------SIKILCASEHIGQVIGKS 313
Query: 573 GSNLANIRKISGATIEMSD-SKSSRGDRVALISGTPEQKRAAENLIQAFIM 622
G N+ + + +GA +++ + K++ +R+ ++S I+A I+
Sbjct: 314 GGNVRQVEQQTGACVQVKEVGKNASEERLIVVSSQEIPDDPVSPTIEALIL 364
>gi|302767378|ref|XP_002967109.1| hypothetical protein SELMODRAFT_87147 [Selaginella moellendorffii]
gi|300165100|gb|EFJ31708.1| hypothetical protein SELMODRAFT_87147 [Selaginella moellendorffii]
Length = 506
Score = 255 bits (652), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 178/495 (35%), Positives = 264/495 (53%), Gaps = 72/495 (14%)
Query: 6 KRYRSQRDNDRDGKNQKRRINEKDEKGNEES------VIYRILCPDGVIGSVIGKSGKVI 59
KR SQ + D ++ ++R E+ E + V+YRILCP IGSVIGK G +I
Sbjct: 9 KRSHSQFEEDSVDRSVRQRRRGGFERTPEAAAPPVDDVVYRILCPGAKIGSVIGKGGSII 68
Query: 60 NSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDK---------EDVEVDDEFNDKE--PL 108
S+R ET A++KV D PG+ +RV+ I + +++ ++++ D E N +E PL
Sbjct: 69 KSLRNETGAKIKVADGIPGSDERVIFISASPRERREGKPRGGSKEMDKDKEQNGEESTPL 128
Query: 109 CAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSK 168
A+Q+AL KV A I D D R ++LVPS+Q ++GKAG I+++R +
Sbjct: 129 PASQEALFKVFARIVEGEEFDEDEDSSRNVT--ARLLVPSNQIGCLLGKAGKIIEQMRVE 186
Query: 169 TRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLET 228
+ I+V P+ E CA D V ++GE VKKAL IS +Y PR+ P
Sbjct: 187 SGAQIRVLPR---EQLPKCAYHTDELVQLTGELALVKKALTTISTRLYDNPPRDKPPQAG 243
Query: 229 TVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTWPV 288
+ S I+P + PPG +P G A + ++G
Sbjct: 244 HLGPFQESTILPGT--LLPPGAFFPQ--------------GNASIAPVEG---------- 277
Query: 289 YSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD 348
E +R+LCP KIG VIGKGG I+SIR+ + A+I + D
Sbjct: 278 ------------------EFAVRLLCPNEKIGSVIGKGGMIIRSIREETCARIKIADAVA 319
Query: 349 NRDECVITVTAIESPDDIKSMAVEAVLLLQTKIND---EDDDTVTIRLLVSSKVIGCIIG 405
N +E VI +T+ E + S A+EAVL LQ++I+D E D +T R LV S IGC++G
Sbjct: 320 NAEERVIHITSNEVLHEQVSPALEAVLQLQSRISDPSAEKDGAMTTRFLVPSANIGCLLG 379
Query: 406 KSGSIINEIRKRTKADVRI-SKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDA 464
K GSII ++R+ T+A++R+ SK PKCA +DELV+VVG++ RDA+++II RLR +
Sbjct: 380 KKGSIIADMRRNTRANIRVLSKEALPKCAHEDDELVQVVGDITVARDAVIEIITRLRANI 439
Query: 465 LKD--RDGSRNPPVG 477
+ ++ S NP +G
Sbjct: 440 FSEHMKNVSSNPGLG 454
Score = 42.7 bits (99), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%)
Query: 554 LTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKR 611
+ +L P +G VIGK GS + ++R +GA I+++D +RV IS +P ++R
Sbjct: 46 VVYRILCPGAKIGSVIGKGGSIIKSLRNETGAKIKVADGIPGSDERVIFISASPRERR 103
>gi|356572762|ref|XP_003554535.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 548
Score = 251 bits (642), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 198/566 (34%), Positives = 296/566 (52%), Gaps = 76/566 (13%)
Query: 5 GKRYRSQRDNDRDGKNQKRRINEKDEKG--NEESVIYRILCPDGVIGSVIGKSGKVINSI 62
GKR SQ D+D +G N++R + E+ + E +YR +CP IGSVIG+ G+++ +
Sbjct: 9 GKRPHSQSDHD-NGPNKRRNHGDDREQFVIDLEDTVYRYVCPGRKIGSVIGRGGEIVKQL 67
Query: 63 RQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAI 122
R ET+A++++ + PG ++RVVTIYS + VE + + AQDAL KVH +
Sbjct: 68 RVETKAKIRIGETVPGCEERVVTIYSPSDETNAVEGGGNY-----VSPAQDALFKVHDRV 122
Query: 123 ANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASE 182
A D D ++ ++LVPS Q +IGK G+ ++ +RS+T I++ KD
Sbjct: 123 V-AEDFHGDQDDDGGQQVTAKLLVPSDQIGCVIGKGGSIVQNIRSETGAQIRIL-KDDHL 180
Query: 183 PTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSD 242
P CA+ D V I+G++ VKKAL I++ ++ R ++ S
Sbjct: 181 PL--CALSSDELVQITGDASVVKKALCQIASRLHDNPSRSQH-------------LLTSA 225
Query: 243 VP-IYPPGGLYPNADPILPSRSVPSILGAARVPDLQGY-ADTGNTWPVYSTGLSLVSGLV 300
VP +YP GG I P P + A V GY DTG+ WP S + S
Sbjct: 226 VPGVYPAGG-----SLIGPGAGAPIVGIAPLVGAYGGYKGDTGD-WPPRS----MYSAPR 275
Query: 301 GASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAI 360
+ ++E +R++CP IG VIGKGG I IRQ SGA I VD + DEC+I ++
Sbjct: 276 DEASTKEFSVRLVCPTGNIGGVIGKGGMIINQIRQESGATIKVDSSTTEGDECLIAISTK 335
Query: 361 ESPDDIKSMAVEAVLLLQTKIND--EDDD---TVTIRLLVSSKVIGCIIGKSGSIINEIR 415
E ++ S +EA + LQ + ++ E D + T RLLV + IGC+IGK GSII E+R
Sbjct: 336 EFFEETFSPTIEAAVRLQPRCSEKVERDSGIISFTTRLLVPTSRIGCLIGKGGSIITEMR 395
Query: 416 KRTKADVR-ISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNP 474
+ TKA++R ISK + PK A +DE+V++ G++ +DALV ++ RLR + L DR+G+ +
Sbjct: 396 RLTKANIRIISKENLPKIASEDDEMVQISGDLDIAKDALVHVLTRLRAN-LFDREGALS- 453
Query: 475 PVGADHIYSSGTGISMPPLLPSIPPVGP----LGYDQRADSGSGIGM-----------LS 519
S P+LP +P L YD R G G L+
Sbjct: 454 --------------SFLPVLPYLPVSADGSDGLNYDGRDGKRHGRGHSYSSGYGGSSDLA 499
Query: 520 SSSLYG-YGSLSMG-DSPYGSMSSYS 543
+ +YG YG +G +S YG+ SYS
Sbjct: 500 AGDIYGSYGGSQLGSNSAYGAYGSYS 525
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 107/323 (33%), Positives = 159/323 (49%), Gaps = 46/323 (14%)
Query: 306 EELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITV-------T 358
E+ V R +CP KIG VIG+GG +K +R + A+I + +T +E V+T+
Sbjct: 40 EDTVYRYVCPGRKIGSVIGRGGEIVKQLRVETKAKIRIGETVPGCEERVVTIYSPSDETN 99
Query: 359 AIESPDDIKSMAVEAVLLLQTKINDED---------DDTVTIRLLVSSKVIGCIIGKSGS 409
A+E + S A +A+ + ++ ED VT +LLV S IGC+IGK GS
Sbjct: 100 AVEGGGNYVSPAQDALFKVHDRVVAEDFHGDQDDDGGQQVTAKLLVPSDQIGCVIGKGGS 159
Query: 410 IINEIRKRTKADVRISKGDK-PKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDR 468
I+ IR T A +RI K D P CA ++DELV++ G+ V+ AL QI RL D+
Sbjct: 160 IVQNIRSETGAQIRILKDDHLPLCALSSDELVQITGDASVVKKALCQIASRLHDN----- 214
Query: 469 DGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYG-YG 527
P + H+ +S ++P V P G G+G ++ + L G YG
Sbjct: 215 ------PSRSQHLLTS-----------AVPGVYPAG-GSLIGPGAGAPIVGIAPLVGAYG 256
Query: 528 SLS--MGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGA 585
GD P SM YS+ ++ ++ P +G VIGK G + IR+ SGA
Sbjct: 257 GYKGDTGDWPPRSM--YSAPRDEASTKEFSVRLVCPTGNIGGVIGKGGMIINQIRQESGA 314
Query: 586 TIEMSDSKSSRGDRVALISGTPE 608
TI++ DS ++ GD + T E
Sbjct: 315 TIKV-DSSTTEGDECLIAISTKE 336
>gi|356550877|ref|XP_003543809.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 561
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 194/565 (34%), Positives = 294/565 (52%), Gaps = 74/565 (13%)
Query: 5 GKRYRSQRDNDRDGKNQKRRINEKDEKG--NEESVIYRILCPDGVIGSVIGKSGKVINSI 62
GKR SQ D+D +G N++R + E+ + E +YR +CP IGSVIG+ G+++ +
Sbjct: 9 GKRPHSQSDHD-NGPNKRRNHGDDREQFVIDSEDTVYRYVCPGRKIGSVIGRGGEIVKQL 67
Query: 63 RQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAI 122
R ET+A++++ + PG ++RVVTIY + VE + + AQDAL KVH +
Sbjct: 68 RVETKAKIRIGETVPGCEERVVTIYGPSDETNAVEGGGNY-----VSPAQDALFKVHDRV 122
Query: 123 ANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASE 182
A D D ++ ++LVPS Q +IGK G+ ++ +R +T I++ KD
Sbjct: 123 V-AEDFHGDQDDDGGQQVTAKLLVPSDQIGCVIGKGGSIVQNIRGETGAQIRIL-KDDHL 180
Query: 183 PTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSD 242
P CA+ D V I+G++ VKKAL+ I++ ++ R L + V
Sbjct: 181 PM--CALSSDELVQITGDAAVVKKALYQIASRLHDNPSRSQHLLTSAVSG---------- 228
Query: 243 VPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQGY-ADTGNTWPVYSTGLSLVSGLVG 301
+YP GG I P P + A V GY DTG+ WP S + S
Sbjct: 229 --VYPAGG-----SLIGPGAGAPIVGIAPLVGSYGGYKGDTGD-WPPRS----MYSAPRD 276
Query: 302 ASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIE 361
+ S+E +R++CP IG VIGKGG I IRQ SGA I VD + DEC+I ++ E
Sbjct: 277 EASSKEFSVRLVCPTGNIGGVIGKGGMIINQIRQDSGATIKVDSSTIEGDECLIAISTKE 336
Query: 362 SPDDIKSMAVEAVLLLQTKIND--EDDD---TVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
++ S +EA + LQ + ++ E D + T RLLV + IGC+IGK GSII ++R+
Sbjct: 337 FFEETFSPTIEAAVRLQPRCSEKVERDSGIISFTTRLLVPTTRIGCLIGKGGSIITDMRR 396
Query: 417 RTKADVR-ISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPP 475
TKA++R ISK + PK A+ +DE+V++ G++ +DALV ++ RLR + L DR+G+ +
Sbjct: 397 LTKANIRIISKENLPKIANEDDEMVQISGDLDVAKDALVHVLTRLRAN-LFDREGALS-- 453
Query: 476 VGADHIYSSGTGISMPPLLPSIPPVGP----LGYDQRADSGSGIGM-----------LSS 520
+ P+LP +P L YD R G G L++
Sbjct: 454 -------------AFLPVLPYLPVSADGSDGLNYDGRDGKRHGRGHSYSSGYGGSSDLAA 500
Query: 521 SSLYG-YGSLSMG-DSPYGSMSSYS 543
+YG YG +G +S YG+ SYS
Sbjct: 501 GDVYGSYGGSQLGSNSAYGAYGSYS 525
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 107/324 (33%), Positives = 156/324 (48%), Gaps = 46/324 (14%)
Query: 305 SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITV------- 357
SE+ V R +CP KIG VIG+GG +K +R + A+I + +T +E V+T+
Sbjct: 39 SEDTVYRYVCPGRKIGSVIGRGGEIVKQLRVETKAKIRIGETVPGCEERVVTIYGPSDET 98
Query: 358 TAIESPDDIKSMAVEAVLLLQTKINDED---------DDTVTIRLLVSSKVIGCIIGKSG 408
A+E + S A +A+ + ++ ED VT +LLV S IGC+IGK G
Sbjct: 99 NAVEGGGNYVSPAQDALFKVHDRVVAEDFHGDQDDDGGQQVTAKLLVPSDQIGCVIGKGG 158
Query: 409 SIINEIRKRTKADVRISKGDK-PKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKD 467
SI+ IR T A +RI K D P CA ++DELV++ G+ V+ AL QI RL D+
Sbjct: 159 SIVQNIRGETGAQIRILKDDHLPMCALSSDELVQITGDAAVVKKALYQIASRLHDN---- 214
Query: 468 RDGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYG-Y 526
P + H+ +S P I P G+G ++ + L G Y
Sbjct: 215 -------PSRSQHLLTSAVSGVYPAGGSLIGP------------GAGAPIVGIAPLVGSY 255
Query: 527 GSLS--MGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISG 584
G GD P SM YS+ ++ ++ P +G VIGK G + IR+ SG
Sbjct: 256 GGYKGDTGDWPPRSM--YSAPRDEASSKEFSVRLVCPTGNIGGVIGKGGMIINQIRQDSG 313
Query: 585 ATIEMSDSKSSRGDRVALISGTPE 608
ATI++ DS + GD + T E
Sbjct: 314 ATIKV-DSSTIEGDECLIAISTKE 336
>gi|302754958|ref|XP_002960903.1| hypothetical protein SELMODRAFT_73985 [Selaginella moellendorffii]
gi|300171842|gb|EFJ38442.1| hypothetical protein SELMODRAFT_73985 [Selaginella moellendorffii]
Length = 502
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 178/493 (36%), Positives = 262/493 (53%), Gaps = 72/493 (14%)
Query: 6 KRYRSQRDNDRDGKNQKRRINEKDEKGNEES------VIYRILCPDGVIGSVIGKSGKVI 59
KR SQ + D ++ ++R E+ E + V+YRILCP IGSVIGK G +I
Sbjct: 9 KRSHSQFEEDSVDRSVRQRRRGGFERTPEAAAPPVDDVVYRILCPGAKIGSVIGKGGSII 68
Query: 60 NSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDK-------EDVEVDDEFNDKE--PLCA 110
S+R ET A++KV D PG+ +RV+ I + + ++++ D E N +E PL A
Sbjct: 69 KSLRNETGAKIKVADGIPGSDERVIFISPRERREGKPRGGSKEMDKDKEQNGEESTPLPA 128
Query: 111 AQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTR 170
+Q+AL KV A I D D R ++LVPS+Q ++GKAG I+++R ++
Sbjct: 129 SQEALFKVFARIVEGEEFDEDEDSSRNVT--ARLLVPSNQIGCLLGKAGKIIEQMRVESG 186
Query: 171 TSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTV 230
I+V P+ E CA D L++GE VKKAL IS +Y PR+ P +
Sbjct: 187 AQIRVLPR---EQLPKCAYHTDE--LLTGELALVKKALTTISTRLYDNPPRDKPPQAGHL 241
Query: 231 REAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTWPVYS 290
S I+P + PPG +P G A + ++G
Sbjct: 242 GPFQESTILPGT--LLPPGAFFPQ--------------GNASIAPVEG------------ 273
Query: 291 TGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNR 350
E +R+LCP KIG VIGKGG I+SIR+ + A+I + D N
Sbjct: 274 ----------------EFAVRLLCPNEKIGSVIGKGGMIIRSIREETCARIKIADAVANA 317
Query: 351 DECVITVTAIESPDDIKSMAVEAVLLLQTKIND---EDDDTVTIRLLVSSKVIGCIIGKS 407
+E VI +T+ E + S A+EAVL LQ++I+D E D +T R LV S IGC++GK
Sbjct: 318 EERVIHITSNEVLHEQVSPALEAVLQLQSRISDPSAEKDGAMTTRFLVPSANIGCLLGKK 377
Query: 408 GSIINEIRKRTKADVRI-SKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALK 466
GSII ++R+ T+A++R+ SK PKCA +DELV+VVG++ RDA+++II RLR +
Sbjct: 378 GSIIADMRRNTRANIRVLSKEALPKCAHEDDELVQVVGDITVARDAVIEIITRLRANIFS 437
Query: 467 D--RDGSRNPPVG 477
+ ++ S NP +G
Sbjct: 438 EHMKNVSSNPGLG 450
>gi|255551350|ref|XP_002516721.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223544094|gb|EEF45619.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 537
Score = 249 bits (635), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 197/516 (38%), Positives = 288/516 (55%), Gaps = 47/516 (9%)
Query: 3 DSGKR--YRSQRDND--RDGKNQKRRINEKDEKGNEES--------VIYRILCPDGVIGS 50
D KR ++ ++N R G +K + N G EES +YRILCP IG
Sbjct: 2 DGNKRNVFKKYQNNQFKRKGVTRKGKWNNS---GREESSGNPLPVDTVYRILCPSRKIGG 58
Query: 51 VIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYS-------HVKDKEDVEVDDEFN 103
VIGK G +I +R+ET+A++ V DP PG+ +RV+ IYS + D ED+ +++E +
Sbjct: 59 VIGKGGGIIKGLREETQAKITVADPVPGSDERVIIIYSSPEKISRNHNDHEDLTMENEQD 118
Query: 104 DKEPLCAAQDALLKVHAAIA--NAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGAT 161
EP CAAQDALLKVH I + T +D ++LVP++ ++GK G
Sbjct: 119 IMEPYCAAQDALLKVHDRIVEEDLFGGMTSDDDNENGFVTARLLVPNNMVGCLLGKRGDV 178
Query: 162 IKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPR 221
I+RLRS+T +I+V P D PT CAM D V IS + + KKAL+ +S ++++ +PR
Sbjct: 179 IQRLRSETGANIRVLPADHL-PT--CAMSTDELVQISAKPDVAKKALYEVSTLLHQ-NPR 234
Query: 222 EDIPLETTVREAPPSIIIP-SDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQGYA 280
+D PPS+ +P S +PPGG N P L S P + +P +
Sbjct: 235 KD---------KPPSVPMPYSGQSFHPPGGPMKNLPP-LGSPMWPHHNSSHSIPPMPIMG 284
Query: 281 DTGNTWPVYSTGL--SLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASG 338
G+ + G + G V A S E +++LC KIG VIGKGG +K ++Q +G
Sbjct: 285 RYGSQSSGFGPGGFDDVPRGHV-AEPSAEFSMKILCSAGKIGGVIGKGGSNVKVVQQDTG 343
Query: 339 AQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKIND-EDDDTVTIRLLVSS 397
A I V+D DE VI V+A E+ + +S ++A+L LQ K +D + T+T RLLV S
Sbjct: 344 ASIHVEDASAESDERVIRVSASEALWNPRSQTIDAILQLQNKTSDFSEKGTITTRLLVPS 403
Query: 398 KVIGCIIGKSGSIINEIRKRTKADVRI-SKGDKPKCADANDELVEVVGEVGSVRDALVQI 456
+GCI+G+ G +INE+R+RT+AD+R+ SK +KPKCA ++ELV++ G+ G +DAL +I
Sbjct: 404 SKVGCILGQGGQVINEMRRRTQADIRVYSKDEKPKCASEDEELVQISGKFGVAKDALAEI 463
Query: 457 ILRLRDDALKDRDGSRNP-PVGADHIYSSGTGISMP 491
RLR L+D + P PVG I G S+P
Sbjct: 464 ASRLRVRTLRDVNAGAEPGPVGP--IQGFGAARSLP 497
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 100/337 (29%), Positives = 163/337 (48%), Gaps = 52/337 (15%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTA------- 359
+ V R+LCP KIG VIGKGGG IK +R+ + A+I V D DE VI + +
Sbjct: 44 DTVYRILCPSRKIGGVIGKGGGIIKGLREETQAKITVADPVPGSDERVIIIYSSPEKISR 103
Query: 360 ---------IESPDDIKS---MAVEAVLLLQTKINDED--------DDT----VTIRLLV 395
+E+ DI A +A+L + +I +ED DD VT RLLV
Sbjct: 104 NHNDHEDLTMENEQDIMEPYCAAQDALLKVHDRIVEEDLFGGMTSDDDNENGFVTARLLV 163
Query: 396 SSKVIGCIIGKSGSIINEIRKRTKADVRISKGDK-PKCADANDELVEVVGEVGSVRDALV 454
+ ++GC++GK G +I +R T A++R+ D P CA + DELV++ + + AL
Sbjct: 164 PNNMVGCLLGKRGDVIQRLRSETGANIRVLPADHLPTCAMSTDELVQISAKPDVAKKALY 223
Query: 455 QIILRLRDDALKDRDGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSG 514
++ L + KD+ S P + G + ++PP+G + S S
Sbjct: 224 EVSTLLHQNPRKDKPPSVPMPYSGQSFHPPGGPMK------NLPPLGSPMWPHHNSSHSI 277
Query: 515 -----IGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVI 569
+G S S G+G D P G ++ S++ ++++L A +G VI
Sbjct: 278 PPMPIMGRYGSQS-SGFGPGGFDDVPRGHVAEPSAEF--------SMKILCSAGKIGGVI 328
Query: 570 GKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGT 606
GK GSN+ +++ +GA+I + D+ + +RV +S +
Sbjct: 329 GKGGSNVKVVQQDTGASIHVEDASAESDERVIRVSAS 365
>gi|168013158|ref|XP_001759268.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689581|gb|EDQ75952.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 427
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 164/448 (36%), Positives = 248/448 (55%), Gaps = 39/448 (8%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKE 94
+ V++RILCP IGSVIGK G +I ++RQE+ A++K+ D PG +RV+ I S + +
Sbjct: 1 DDVVFRILCPAPKIGSVIGKGGSIIKTLRQESGAKIKIADAIPGVDERVILISSTDRGND 60
Query: 95 DVEVDDEFNDKEPLCAAQDALLKVHAAIANAVA----NATDNDKKRKEKEECQILVPSSQ 150
D + E L AQ+AL KVHA I V + +D +++ ++ ++LVP++Q
Sbjct: 61 RGRGKD--GNSEELTPAQEALFKVHARIIADVETSGIDGSDQEEEPSQQVVTRLLVPNNQ 118
Query: 151 SANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFA 210
++GK G I+++R T I+V PKD CA+ D V +SG+ +KKAL
Sbjct: 119 IGCLLGKGGKIIEQMRQTTGAQIRVLPKDQ---LPGCALPTDELVQVSGDVSTLKKALLF 175
Query: 211 ISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGA 270
ISA + + PR+ P S P+ P + P Y D S+ + G
Sbjct: 176 ISARLQENPPRD----------RPQSYAAPA--PAFVPVTDYLAKDS-YRSKGTGHVFGL 222
Query: 271 ARVPDLQGYADTGNTWPVYSTGLSL------VSGLVGASQSEELVIRVLCPFNKIGRVIG 324
P G +W + S LSL S S ELV R+LCP +KIG VIG
Sbjct: 223 GPEPL------EGRSWTISSGNLSLDRQDNRRSKEGRDSGENELVFRLLCPSDKIGSVIG 276
Query: 325 KGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKINDE 384
KGG I ++R+ +GA+I + + DE VI V+A+E P D S A+EA++ +Q++I E
Sbjct: 277 KGGSIIHNLRKDTGARIKIANAVPGSDERVIIVSALELPGDSFSPALEAMIQVQSRITAE 336
Query: 385 ----DDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDK-PKCADANDEL 439
D +T RLLV + IGC++GK GSII ++R+ T+A++R+ D P+CA DEL
Sbjct: 337 MGGDKDGIITTRLLVPTNQIGCLLGKGGSIIEDMRRATRANIRVLPKDTLPRCALDTDEL 396
Query: 440 VEVVGEVGSVRDALVQIILRLRDDALKD 467
V++VG+ R+AL Q+I RLR++A ++
Sbjct: 397 VQIVGDTTVAREALFQVISRLRNNAFRE 424
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 105/334 (31%), Positives = 166/334 (49%), Gaps = 59/334 (17%)
Query: 306 EELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDD 365
+++V R+LCP KIG VIGKGG IK++RQ SGA+I + D DE VI +++ + +D
Sbjct: 1 DDVVFRILCPAPKIGSVIGKGGSIIKTLRQESGAKIKIADAIPGVDERVILISSTDRGND 60
Query: 366 IK----------SMAVEAVLLLQTKI--------------NDEDDDTVTIRLLVSSKVIG 401
+ A EA+ + +I +E V RLLV + IG
Sbjct: 61 RGRGKDGNSEELTPAQEALFKVHARIIADVETSGIDGSDQEEEPSQQVVTRLLVPNNQIG 120
Query: 402 CIIGKSGSIINEIRKRTKADVRISKGDK-PKCADANDELVEVVGEVGSVRDALVQIILRL 460
C++GK G II ++R+ T A +R+ D+ P CA DELV+V G+V +++ AL+ I RL
Sbjct: 121 CLLGKGGKIIEQMRQTTGAQIRVLPKDQLPGCALPTDELVQVSGDVSTLKKALLFISARL 180
Query: 461 RDDALKDRDGSRNPPVGA----------DHIYSSGTGISMPPLLPSIPPVGPLGYDQRAD 510
+++ +DR S P A D S GTG + +GP + R+
Sbjct: 181 QENPPRDRPQSYAAPAPAFVPVTDYLAKDSYRSKGTG--------HVFGLGPEPLEGRSW 232
Query: 511 SGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIG 570
+ +SS +L SL D+ S + L +L P++ +G VIG
Sbjct: 233 T------ISSGNL----SLDRQDNRRSKEGRDSGE------NELVFRLLCPSDKIGSVIG 276
Query: 571 KAGSNLANIRKISGATIEMSDSKSSRGDRVALIS 604
K GS + N+RK +GA I+++++ +RV ++S
Sbjct: 277 KGGSIIHNLRKDTGARIKIANAVPGSDERVIIVS 310
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 112/205 (54%), Gaps = 24/205 (11%)
Query: 19 KNQKRRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPG 78
+ RR E + G E +++R+LCP IGSVIGK G +I+++R++T AR+K+ + PG
Sbjct: 243 RQDNRRSKEGRDSGENE-LVFRLLCPSDKIGSVIGKGGSIIHNLRKDTGARIKIANAVPG 301
Query: 79 AKDRVVTIYSHVKDKEDVEV-DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRK 137
+ +RV+ + + +E+ D F+ A +A+++V + I + D +
Sbjct: 302 SDERVIIVSA-------LELPGDSFS------PALEAMIQVQSRITAEMGGDKDGIITTR 348
Query: 138 EKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLI 197
+LVP++Q ++GK G+ I+ +R TR +I+V PKD CA++ D V I
Sbjct: 349 ------LLVPTNQIGCLLGKGGSIIEDMRRATRANIRVLPKDT---LPRCALDTDELVQI 399
Query: 198 SGESEAVKKALFAISAIMYKFSPRE 222
G++ ++ALF + + + + RE
Sbjct: 400 VGDTTVAREALFQVISRLRNNAFRE 424
Score = 42.0 bits (97), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%)
Query: 554 LTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGT 606
+ +L PA +G VIGK GS + +R+ SGA I+++D+ +RV LIS T
Sbjct: 3 VVFRILCPAPKIGSVIGKGGSIIKTLRQESGAKIKIADAIPGVDERVILISST 55
>gi|357146815|ref|XP_003574121.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 777
Score = 245 bits (626), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 165/498 (33%), Positives = 266/498 (53%), Gaps = 68/498 (13%)
Query: 4 SGKRYRSQRDNDRDGKNQKRRINEKDEKGNEES----VIYRILCPDGVIGSVIGKSGKVI 59
S R R+ ++D DG ++R+N + + G S +YRILCP IGSV+G+ G ++
Sbjct: 12 STSRKRTHFNSD-DGN--RKRLNSRHDDGPMSSQPIETVYRILCPGKKIGSVLGRGGHIV 68
Query: 60 NSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKE-------DVEVDDEFNDKEPLCAAQ 112
++R+ET+A+++V D PGA++RV+ I+ + E ++ +D + + C AQ
Sbjct: 69 KALREETKAKIRVADSIPGAEERVIIIFDYQDQSEQTDEAAQNISNNDGSENMKLQCFAQ 128
Query: 113 DALLKVHAAIANAVANATDNDKKRKEKEE------CQILVPSSQSANIIGKAGATIKRLR 166
DALLK+H I+ + +D EK E +ILVP +Q ++GK G+ I++LR
Sbjct: 129 DALLKIHDKIS---THEDPHDGAIHEKSETAADVTARILVPGNQVGCLLGKGGSIIQQLR 185
Query: 167 SKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPL 226
+ T I++ P S+ CA++ D V ISG V+KAL+ IS +++ +E+ PL
Sbjct: 186 NDTGAGIRILP---SQDLPQCALQSDELVQISGAPSLVRKALYEISTRLHQHPRKENPPL 242
Query: 227 ETTV-------REAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQGY 279
E + RE+PP + P+ + +LP + V + +P L Y
Sbjct: 243 EEIIDASTQRKRESPPPL---------------PHENLMLPYQHVDRL---PPMPLLDPY 284
Query: 280 ADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGA 339
+ +PV ++EE +R+LC IG VIGK G ++ + Q +GA
Sbjct: 285 RSRPSQYPV--------------PEAEEFSVRILCASELIGPVIGKSGANVRQVEQQTGA 330
Query: 340 QIDVDDT-KDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKINDEDDDTVTI-RLLVSS 397
+I V + KD E +I +++ E P D S A+EA++LL +K++ + I RL+V S
Sbjct: 331 RILVQELDKDASGERLIVLSSKEIPGDPVSPAIEALILLHSKVSASSEKRHLITRLVVPS 390
Query: 398 KVIGCIIGKSGSIINEIRKRTKADVRI-SKGDKPKCADANDELVEVVGEVGSVRDALVQI 456
+GCI+G+ G +I E+R+R A++R+ SK DKPK ++ELV+V G RDAL +I
Sbjct: 391 SKVGCILGEGGKVITEMRRRIGAEIRVYSKADKPKYLSFDEELVQVAGPPDIARDALTEI 450
Query: 457 ILRLRDDALKDRDGSRNP 474
RLR L+D NP
Sbjct: 451 ASRLRTRTLRDGGSGNNP 468
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 47/70 (67%)
Query: 555 TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAE 614
+LE+++P +++G V+G G NLA IR+ISGA +++ + + + I G P+Q RAA+
Sbjct: 688 SLELMIPNSSLGSVLGAGGVNLAEIRQISGARMKLLEGHPGSSESIMEIQGMPDQVRAAQ 747
Query: 615 NLIQAFIMAT 624
+L+Q FI A
Sbjct: 748 SLLQGFIGAN 757
>gi|147834901|emb|CAN63963.1| hypothetical protein VITISV_030144 [Vitis vinifera]
Length = 739
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 134/243 (55%), Positives = 157/243 (64%), Gaps = 68/243 (27%)
Query: 215 MYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVP 274
MYKF+ RE+IPL+TTV EAPPSIIIPSDVPIYP GG YP+AD I+ +RSV +L AA
Sbjct: 558 MYKFTLREEIPLDTTVPEAPPSIIIPSDVPIYPAGGFYPSADSIVSARSVLPVLAAA--- 614
Query: 275 DLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIR 334
IGRVIG+GG +IKS+R
Sbjct: 615 -------------------------------------------HIGRVIGRGGSSIKSVR 631
Query: 335 QASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKINDEDDDTVTIRLL 394
+ASGA ++VDDTK +RDEC+ITVT+ ES DD+KSMAVEAVLLL+ KINDEDDD VTIRLL
Sbjct: 632 EASGAHVEVDDTKADRDECLITVTSTESVDDLKSMAVEAVLLLRAKINDEDDDIVTIRLL 691
Query: 395 VSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALV 454
RT+ADVRISK ++PKCADANDEL+EVVGE+GSVRDALV
Sbjct: 692 ----------------------RTRADVRISKSERPKCADANDELIEVVGEIGSVRDALV 729
Query: 455 QII 457
QII
Sbjct: 730 QII 732
Score = 40.0 bits (92), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGT 606
L VL A+ +G+VIG+ GS++ ++R+ SGA +E+ D+K+ R + + ++ T
Sbjct: 608 LPVLAAAH-IGRVIGRGGSSIKSVREASGAHVEVDDTKADRDECLITVTST 657
>gi|53749469|gb|AAU90323.1| KH domain containing protein [Solanum demissum]
Length = 533
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 182/558 (32%), Positives = 280/558 (50%), Gaps = 76/558 (13%)
Query: 5 GKRYRSQRDNDR-DGKNQKRRINEKDEKG-NEESVIYRILCPDGVIGSVIGKSGKVINSI 62
GKR +S+ D R DG ++ +EK+ E ++R LCP G IGS+IG G + +
Sbjct: 9 GKRMQSESDYSRSDGSKRRTPTDEKESNSIGPEDTVFRYLCPTGKIGSIIGVGGDIAKQL 68
Query: 63 RQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAI 122
R ET +++++ + PG ++RVVTIYS E+ V ++ D + AQDAL +VH +
Sbjct: 69 RTETNSKIRISETIPGCEERVVTIYS---GSEETNVSEDTGDL--ISPAQDALFRVHDRV 123
Query: 123 ANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASE 182
A D D + ++ ++LVPS Q +IGK G I+ LRS+T I+V +SE
Sbjct: 124 L-AEDLRMDEDLEDHQQITVRMLVPSDQIGCVIGKGGQVIQNLRSETGAQIRVL---SSE 179
Query: 183 PTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSD 242
CA+ D + I+GE VKKAL+ ++A ++ R L ++ PS
Sbjct: 180 HLPPCALNSDELLQITGEGAVVKKALYQVAARLHDNPSRSQHQLLSS----------PS- 228
Query: 243 VPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGA 302
I+ G + N V S++G + Y + G +
Sbjct: 229 --IFRSGAGFVNPHAGTQVMGVTSLMGP---------------YASYKS-----DGRSKS 266
Query: 303 SQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIES 362
S +E +R++CP +G VIGKGGG IK +RQ SGA I VD D+C+I V+A E+
Sbjct: 267 SSVKEFAVRLVCPTENVGAVIGKGGGIIKQLRQESGASIKVDSAAAEGDDCIIFVSAKEA 326
Query: 363 PDDIKSMAVEAVLLLQTKINDED-----DDTVTIRLLVSSKVIGCIIGKSGSIINEIRKR 417
+D +S ++A + LQ + +++ D +T RLLV S +GC+IGK GSIINE+R
Sbjct: 327 FED-QSPTIDATMRLQPRSSEKTEKESGDAILTTRLLVPSSRVGCLIGKGGSIINEMRNS 385
Query: 418 TKADVRI-SKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPV 476
T+A +R+ SK + PK A +DE+V++ G+ +AL+Q+++RLR + + +GS
Sbjct: 386 TRASIRVLSKENLPKVASEDDEMVQITGDANVATNALLQVLMRLRANTF-EMEGS----- 439
Query: 477 GADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDS-- 534
+ G+S P+ S+P Y R + G S S + Y LS DS
Sbjct: 440 ----FPAFSPGLSYVPMSASMPDGSR--YGNRDNRSRRHGYSSYSGGHDYNDLSPSDSYG 493
Query: 535 -----------PYGSMSS 541
PYG SS
Sbjct: 494 GSQVGGGGNYAPYGVYSS 511
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 94/312 (30%), Positives = 151/312 (48%), Gaps = 56/312 (17%)
Query: 306 EELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTA------ 359
E+ V R LCP KIG +IG GG K +R + ++I + +T +E V+T+ +
Sbjct: 41 EDTVFRYLCPTGKIGSIIGVGGDIAKQLRTETNSKIRISETIPGCEERVVTIYSGSEETN 100
Query: 360 -IESPDDIKSMAVEAVLLLQTKI---------NDEDDDTVTIRLLVSSKVIGCIIGKSGS 409
E D+ S A +A+ + ++ + ED +T+R+LV S IGC+IGK G
Sbjct: 101 VSEDTGDLISPAQDALFRVHDRVLAEDLRMDEDLEDHQQITVRMLVPSDQIGCVIGKGGQ 160
Query: 410 IINEIRKRTKADVRI-SKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDR 468
+I +R T A +R+ S P CA +DEL+++ GE V+ AL Q+ RL D+ +
Sbjct: 161 VIQNLRSETGAQIRVLSSEHLPPCALNSDELLQITGEGAVVKKALYQVAARLHDNPSR-- 218
Query: 469 DGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYG-YG 527
S++ + + I+ SG G P +G ++ +SL G Y
Sbjct: 219 --SQHQLLSSPSIFRSGAGFVNPH--------------------AGTQVMGVTSLMGPYA 256
Query: 528 SL-SMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGAT 586
S S G S S+ ++ +L + P VG VIGK G + +R+ SGA+
Sbjct: 257 SYKSDGRSKSSSVKEFAVRL------------VCPTENVGAVIGKGGGIIKQLRQESGAS 304
Query: 587 IEMSDSKSSRGD 598
I++ DS ++ GD
Sbjct: 305 IKV-DSAAAEGD 315
>gi|224141011|ref|XP_002323868.1| predicted protein [Populus trichocarpa]
gi|222866870|gb|EEF04001.1| predicted protein [Populus trichocarpa]
Length = 531
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 196/570 (34%), Positives = 290/570 (50%), Gaps = 84/570 (14%)
Query: 5 GKRYRSQRDNDRDGKNQKRRINEKDEKG--NEESVIYRILCPDGVIGSVIGKSGKVINSI 62
GKR SQ D D G N++R + E+ + + +YR LCP IGS+IG+ G++I +
Sbjct: 9 GKRAHSQSDYDIGG-NKRRNSGDDRERFVIDSQDTVYRYLCPARKIGSIIGRGGEIIKQL 67
Query: 63 RQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAI 122
R +T+++++V + PG ++RVVTIYS E E +D N P AQDAL +VH +
Sbjct: 68 RIDTKSKIRVGETVPGCEERVVTIYS--PSDETNEYEDSGNYISP---AQDALFRVHDKV 122
Query: 123 ANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASE 182
A ++D + + ++LVPS Q IIGK G ++ +RS+T I++ +
Sbjct: 123 I-AEDLQVEDDSEGSPQVTAKLLVPSDQIGCIIGKGGQIVQNIRSETGAVIRILKDEHLP 181
Query: 183 PTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSD 242
P CA+ D V ISGE+ +KKAL+ I++ ++ R L + V S+
Sbjct: 182 P---CALSSDELVQISGEAAVLKKALYQIASRLHDNPSRSQHLLVSAVPNVYSSV----- 233
Query: 243 VPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQGY-ADTGNTWPVYSTGLSLVSGLVG 301
G L + PS + P + A + G+ DTG+ W SL S
Sbjct: 234 ------GSL------VGPSAAAPIVGIAPLMGPYGGFKGDTGD-WS-----RSLYSAPRD 275
Query: 302 ASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIE 361
S+E +RV+CP IG VIGKGG I IRQ SGA I VD + D+C+IT++A E
Sbjct: 276 ELASKEFSLRVVCPTANIGAVIGKGGTIINQIRQESGATIKVDSSVAEGDDCLITISAKE 335
Query: 362 SPDDIKSMAVEAVLLLQTKIND--EDDD---TVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
D S +EA + LQ + ++ E D + T RLLV S IGC++GK G+II+E+RK
Sbjct: 336 IYDHY-SPTIEAAVRLQPRCSEKMERDSGLISFTTRLLVPSSRIGCLLGKGGAIIDEMRK 394
Query: 417 RTKADVRI-SKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPP 475
TKA +RI K + PK A +DE+V++ G++ +DAL+QI RLR + DR+G+ +
Sbjct: 395 LTKAIIRIPRKENLPKVASDDDEMVQIAGDLDVAKDALIQISRRLRANVF-DREGAMS-- 451
Query: 476 VGADHIYSSGTGISMPPLLPSIPPVGP----LGYDQR-----------------ADSGSG 514
++ P+LP +P L YD R +D SG
Sbjct: 452 -------------AILPVLPYLPVSAEGSEGLNYDSRDGKRHGRGSSYAGGYSSSDYASG 498
Query: 515 IGMLSSSSLYGYGSLSMGDSPYGSMSSYSS 544
G S YG ++ PYG+ SYSS
Sbjct: 499 DGYGS----YGSSQINASGGPYGAYGSYSS 524
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 109/316 (34%), Positives = 162/316 (51%), Gaps = 51/316 (16%)
Query: 305 SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTA----- 359
S++ V R LCP KIG +IG+GG IK +R + ++I V +T +E V+T+ +
Sbjct: 39 SQDTVYRYLCPARKIGSIIGRGGEIIKQLRIDTKSKIRVGETVPGCEERVVTIYSPSDET 98
Query: 360 --IESPDDIKSMAVEAVLLLQTKINDED----DDT-----VTIRLLVSSKVIGCIIGKSG 408
E + S A +A+ + K+ ED DD+ VT +LLV S IGCIIGK G
Sbjct: 99 NEYEDSGNYISPAQDALFRVHDKVIAEDLQVEDDSEGSPQVTAKLLVPSDQIGCIIGKGG 158
Query: 409 SIINEIRKRTKADVRISKGDK-PKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKD 467
I+ IR T A +RI K + P CA ++DELV++ GE ++ AL QI RL D+ +
Sbjct: 159 QIVQNIRSETGAVIRILKDEHLPPCALSSDELVQISGEAAVLKKALYQIASRLHDNPSR- 217
Query: 468 RDGSRNPPVGA-DHIYSSGTGISMP----PLLPSIPPVGPLGYDQRADSGSGIGMLSSSS 522
S++ V A ++YSS + P P++ P +GP G + D+G S S
Sbjct: 218 ---SQHLLVSAVPNVYSSVGSLVGPSAAAPIVGIAPLMGPYG-GFKGDTGDW-----SRS 268
Query: 523 LYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKI 582
LY +P ++S +L V+ P +G VIGK G+ + IR+
Sbjct: 269 LY--------SAPRDELAS----------KEFSLRVVCPTANIGAVIGKGGTIINQIRQE 310
Query: 583 SGATIEMSDSKSSRGD 598
SGATI++ DS + GD
Sbjct: 311 SGATIKV-DSSVAEGD 325
>gi|414870928|tpg|DAA49485.1| TPA: hypothetical protein ZEAMMB73_398324 [Zea mays]
Length = 770
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 166/492 (33%), Positives = 264/492 (53%), Gaps = 61/492 (12%)
Query: 3 DSGKRYRSQRDNDRDGKNQKRRINEKDEKGNEESV--IYRILCPDGVIGSVIGKSGKVIN 60
+S KR S D DGK ++ D E + IYRILCP IGSV+G+ G ++
Sbjct: 10 NSKKRTHSNSD---DGKRKRLNTRHDDTSMFSEPIETIYRILCPVKKIGSVLGRGGDIVK 66
Query: 61 SIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPL------CAAQDA 114
++R+ET+A+++V D PGA +RV+ I+++ + E + E + + L C AQDA
Sbjct: 67 ALREETKAKIRVADSIPGADERVIIIFNYQNEPEPTDEAAEEKNSDGLGNFKSHCFAQDA 126
Query: 115 LLKVHAAI-ANAVANATDNDKKRKEKEE--CQILVPSSQSANIIGKAGATIKRLRSKTRT 171
LLK+H I ++ + + ND+K + ++ +ILV +Q ++GK G+ I++LRS T
Sbjct: 127 LLKIHDKIVSDEIHDEVANDEKSESADDVTARILVQGNQVGCLLGKGGSIIQQLRSNTGA 186
Query: 172 SIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTV- 230
I+V P SE CA++ D V ISG V+KAL+ IS +++ +E+ PLE +
Sbjct: 187 GIRVLP---SENLPQCALKSDELVQISGAPSLVRKALYEISTRLHQHPRKENRPLEEIID 243
Query: 231 ------REAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQGYADTGN 284
RE+P + + + P L+ + P +P +L R +G
Sbjct: 244 ASTQRKRESP---TLQHEYSMLP--HLHSDHTPPIP------LLDPYR---------SGP 283
Query: 285 TWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVD 344
+PV +++EE IR+LC IG VIGK G ++ + Q +GA+I V
Sbjct: 284 QYPV--------------TETEEFSIRILCASELIGSVIGKSGANVRRVEQQTGARIKVQ 329
Query: 345 DT-KDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKIN-DEDDDTVTIRLLVSSKVIGC 402
+ KD E +I +++ E P + S A+EA++LL K++ + + RL+V S +GC
Sbjct: 330 EIDKDASGERLIIISSNEIPAEPISPAIEALILLHDKVSAPSEKHHSSTRLVVPSSKVGC 389
Query: 403 IIGKSGSIINEIRKRTKADVRI-SKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLR 461
IIG+ G +I ++R+RT A++R+ SK DKPK +DELV+V G R AL +I RLR
Sbjct: 390 IIGEGGKVITDMRRRTGAEIRVYSKADKPKYLSFDDELVQVAGPPTIARGALTEIASRLR 449
Query: 462 DDALKDRDGSRN 473
L+D + N
Sbjct: 450 TRTLRDTSTANN 461
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 103/360 (28%), Positives = 159/360 (44%), Gaps = 83/360 (23%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIES---P 363
E + R+LCP KIG V+G+GG +K++R+ + A+I V D+ DE VI + ++ P
Sbjct: 42 ETIYRILCPVKKIGSVLGRGGDIVKALREETKAKIRVADSIPGADERVIIIFNYQNEPEP 101
Query: 364 DD-------------IKS--MAVEAVLLLQTKI----------NDEDD---DTVTIRLLV 395
D KS A +A+L + KI NDE D VT R+LV
Sbjct: 102 TDEAAEEKNSDGLGNFKSHCFAQDALLKIHDKIVSDEIHDEVANDEKSESADDVTARILV 161
Query: 396 SSKVIGCIIGKSGSIINEIRKRTKADVRISKGDK-PKCADANDELVEVVGEVGSVRDALV 454
+GC++GK GSII ++R T A +R+ + P+CA +DELV++ G VR AL
Sbjct: 162 QGNQVGCLLGKGGSIIQQLRSNTGAGIRVLPSENLPQCALKSDELVQISGAPSLVRKALY 221
Query: 455 QIILRLRDDALKDR-------DGS----RNPPVGADHIYSSGTGISMPPLLPSIPPVGPL 503
+I RL K+ D S R P H YS +LP +
Sbjct: 222 EISTRLHQHPRKENRPLEEIIDASTQRKRESPT-LQHEYS---------MLPHL------ 265
Query: 504 GYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPAN 563
+D I +L PY S Y ++ +L +
Sbjct: 266 ----HSDHTPPIPLLD---------------PYRSGPQYPVTETEEF----SIRILCASE 302
Query: 564 AVGKVIGKAGSNLANIRKISGATIEMSD-SKSSRGDRVALISGTPEQKRAAENLIQAFIM 622
+G VIGK+G+N+ + + +GA I++ + K + G+R+ +IS I+A I+
Sbjct: 303 LIGSVIGKSGANVRRVEQQTGARIKVQEIDKDASGERLIIISSNEIPAEPISPAIEALIL 362
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 47/69 (68%)
Query: 555 TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAE 614
T+E+ +P +++G ++G G NLA IR++SGA + + ++ + + V I GT +Q +AA+
Sbjct: 682 TIELRIPNSSLGSIVGAGGVNLAEIRQVSGARLRLHEAHAGSSESVVEIQGTLDQAKAAQ 741
Query: 615 NLIQAFIMA 623
+L+Q FI A
Sbjct: 742 SLLQGFISA 750
>gi|195655947|gb|ACG47441.1| nucleic acid binding protein [Zea mays]
gi|414870927|tpg|DAA49484.1| TPA: nucleic acid binding protein [Zea mays]
Length = 769
Score = 239 bits (609), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 166/492 (33%), Positives = 264/492 (53%), Gaps = 61/492 (12%)
Query: 3 DSGKRYRSQRDNDRDGKNQKRRINEKDEKGNEESV--IYRILCPDGVIGSVIGKSGKVIN 60
+S KR S D DGK ++ D E + IYRILCP IGSV+G+ G ++
Sbjct: 10 NSKKRTHSNSD---DGKRKRLNTRHDDTSMFSEPIETIYRILCPVKKIGSVLGRGGDIVK 66
Query: 61 SIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPL------CAAQDA 114
++R+ET+A+++V D PGA +RV+ I+++ + E + E + + L C AQDA
Sbjct: 67 ALREETKAKIRVADSIPGADERVIIIFNYQNEPEPTDEAAEEKNSDGLGNFKSHCFAQDA 126
Query: 115 LLKVHAAI-ANAVANATDNDKKRKEKEE--CQILVPSSQSANIIGKAGATIKRLRSKTRT 171
LLK+H I ++ + + ND+K + ++ +ILV +Q ++GK G+ I++LRS T
Sbjct: 127 LLKIHDKIVSDEIHDEVANDEKSESADDVTARILVQGNQVGCLLGKGGSIIQQLRSNTGA 186
Query: 172 SIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTV- 230
I+V P SE CA++ D V ISG V+KAL+ IS +++ +E+ PLE +
Sbjct: 187 GIRVLP---SENLPQCALKSDELVQISGAPSLVRKALYEISTRLHQHPRKENRPLEEIID 243
Query: 231 ------REAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQGYADTGN 284
RE+P + + + P L+ + P +P +L R +G
Sbjct: 244 ASTQRKRESP---TLQHEYSMLP--HLHSDHTPPIP------LLDPYR---------SGP 283
Query: 285 TWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVD 344
+PV +++EE IR+LC IG VIGK G ++ + Q +GA+I V
Sbjct: 284 QYPV--------------TETEEFSIRILCASELIGSVIGKSGANVRRVEQQTGARIKVQ 329
Query: 345 DT-KDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKIN-DEDDDTVTIRLLVSSKVIGC 402
+ KD E +I +++ E P + S A+EA++LL K++ + + RL+V S +GC
Sbjct: 330 EIDKDASGERLIIISSNEIPAEPISPAIEALILLHDKVSAPSEKHHSSTRLVVPSSKVGC 389
Query: 403 IIGKSGSIINEIRKRTKADVRI-SKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLR 461
IIG+ G +I ++R+RT A++R+ SK DKPK +DELV+V G R AL +I RLR
Sbjct: 390 IIGEGGKVITDMRRRTGAEIRVYSKADKPKYLSFDDELVQVAGPPTIARGALTEIASRLR 449
Query: 462 DDALKDRDGSRN 473
L+D + N
Sbjct: 450 TRTLRDTSTANN 461
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 103/360 (28%), Positives = 159/360 (44%), Gaps = 83/360 (23%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIES---P 363
E + R+LCP KIG V+G+GG +K++R+ + A+I V D+ DE VI + ++ P
Sbjct: 42 ETIYRILCPVKKIGSVLGRGGDIVKALREETKAKIRVADSIPGADERVIIIFNYQNEPEP 101
Query: 364 DD-------------IKS--MAVEAVLLLQTKI----------NDEDD---DTVTIRLLV 395
D KS A +A+L + KI NDE D VT R+LV
Sbjct: 102 TDEAAEEKNSDGLGNFKSHCFAQDALLKIHDKIVSDEIHDEVANDEKSESADDVTARILV 161
Query: 396 SSKVIGCIIGKSGSIINEIRKRTKADVRISKGDK-PKCADANDELVEVVGEVGSVRDALV 454
+GC++GK GSII ++R T A +R+ + P+CA +DELV++ G VR AL
Sbjct: 162 QGNQVGCLLGKGGSIIQQLRSNTGAGIRVLPSENLPQCALKSDELVQISGAPSLVRKALY 221
Query: 455 QIILRLRDDALKDR-------DGS----RNPPVGADHIYSSGTGISMPPLLPSIPPVGPL 503
+I RL K+ D S R P H YS +LP +
Sbjct: 222 EISTRLHQHPRKENRPLEEIIDASTQRKRESPT-LQHEYS---------MLPHL------ 265
Query: 504 GYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPAN 563
+D I +L PY S Y ++ +L +
Sbjct: 266 ----HSDHTPPIPLLD---------------PYRSGPQYPVTETEEF----SIRILCASE 302
Query: 564 AVGKVIGKAGSNLANIRKISGATIEMSD-SKSSRGDRVALISGTPEQKRAAENLIQAFIM 622
+G VIGK+G+N+ + + +GA I++ + K + G+R+ +IS I+A I+
Sbjct: 303 LIGSVIGKSGANVRRVEQQTGARIKVQEIDKDASGERLIIISSNEIPAEPISPAIEALIL 362
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 47/69 (68%)
Query: 555 TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAE 614
T+E+ +P +++G ++G G NLA IR++SGA + + ++ + + V I GT +Q +AA+
Sbjct: 681 TIELRIPNSSLGSIVGAGGVNLAEIRQVSGARLRLHEAHAGSSESVVEIQGTLDQAKAAQ 740
Query: 615 NLIQAFIMA 623
+L+Q FI A
Sbjct: 741 SLLQGFISA 749
>gi|356507955|ref|XP_003522728.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 678
Score = 238 bits (608), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 202/662 (30%), Positives = 316/662 (47%), Gaps = 95/662 (14%)
Query: 36 SVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKED 95
SV++R+LC IGSVIGK G +I+ IR ET +VK+ + PG +RV+TI K+ E+
Sbjct: 33 SVVFRLLCHASRIGSVIGKGGSIISQIRLETGVKVKIEEAVPGCDERVITISGSDKEAEE 92
Query: 96 V------EVDD-------------------------EFNDKEPL---------CAAQDAL 115
EV+D E D P+ A A+
Sbjct: 93 YTAEQGKEVNDNDDVGSEGKDGEEKNGSDGNGNEDKEEKDAVPVEDSKSEKGNSAIWKAI 152
Query: 116 LKVHAAIANAVANATDNDKKRKEKEE--CQILVPSSQSANIIGKAGATIKRLRSKTRTSI 173
V + V T+ D++ + ++L+ ++Q ++GK G+ IKR+ +++ I
Sbjct: 153 SLVFERMVEGVEETTEGDEESNKSSSFFLRLLILTAQVGCVLGKGGSVIKRMAAESGAQI 212
Query: 174 KVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREA 233
++ PKD CA FD V ISG E V+KAL ++S + + PR+ L
Sbjct: 213 RILPKDK---VPVCASAFDEIVQISGSVEVVRKALQSVSQQLLENPPRDHESLSAK---- 265
Query: 234 PPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTWPVYSTGL 293
S P G +P + ++ P G D+ + P +
Sbjct: 266 -------STGPSSHSFGQFPPHNHSFAAQGEPFATGPH---DISAFHSAPPLIPKFHE-- 313
Query: 294 SLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDEC 353
+ + G Q E L R+LCP ++G +IGKGG IK+++Q + ++I V + + ++C
Sbjct: 314 AAIHGRTRPLQ-EMLTFRLLCPVERVGNIIGKGGAIIKTVQQETVSEIKVLEAPPDSEDC 372
Query: 354 VITVTAIESPDDIKSMAVEAVLLLQTKIN----DEDDDTVTIRLLVSSKVIGCIIGKSGS 409
VI ++ P+D S EAV +QT+I D +D T+ R LVSS IGC++GK GS
Sbjct: 373 VIVISGPAHPEDRVSPVQEAVFRVQTRIAKPIPDANDHTMLARFLVSSNQIGCLLGKGGS 432
Query: 410 IINEIRKRTKADVRISKGDK-PKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDR 468
II E+RK++ A +RI DK PKCA ++E+++V GE+ +V +AL+QI RL+ +D
Sbjct: 433 IITEMRKKSGAHIRILGKDKVPKCASEDEEVIQVNGEIEAVHEALLQITTRLKHHFFRDS 492
Query: 469 DGSRNPPVGADHI--------YSSGTGISMPPLLPSI-PPVGPLGY--DQRADSGSGIG- 516
S N P + + Y G+S P + + PP G+ D R + I
Sbjct: 493 YPSVNYPSNSPFLDQLPPFPPYLGRRGLSPPGMYSDLGPPPSHAGFPLDDRPAFLNNIHR 552
Query: 517 -----MLSSSSLYGYGSLSMGDSPYGSMSSYS-------SKLYGGLPPPL---TLEVLVP 561
+S +G + G +P G + + S GG P + T+EV+VP
Sbjct: 553 PGLPPHISQRKPWGPLGVLEGGTPIG-LPDFPRGPPRRISGFAGGSQPIITSTTVEVVVP 611
Query: 562 ANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFI 621
V + G+ G L I +IS A I ++D K + +ISGTPEQ AA++LIQAF+
Sbjct: 612 RAVVPVIYGEDGECLKQILQISDANITITDPKPGAVETKIIISGTPEQTHAAQSLIQAFV 671
Query: 622 MA 623
M+
Sbjct: 672 MS 673
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 93/383 (24%), Positives = 162/383 (42%), Gaps = 74/383 (19%)
Query: 34 EESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIY--SHVK 91
+E + +R+LCP +G++IGK G +I +++QET + +KV++ P ++D V+ I +H +
Sbjct: 324 QEMLTFRLLCPVERVGNIIGKGGAIIKTVQQETVSEIKVLEAPPDSEDCVIVISGPAHPE 383
Query: 92 DKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQS 151
D+ + Q+A+ +V IA + +A D+ + LV S+Q
Sbjct: 384 DR--------------VSPVQEAVFRVQTRIAKPIPDANDHTML------ARFLVSSNQI 423
Query: 152 ANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAI 211
++GK G+ I +R K+ I++ KD CA E + + ++GE EAV +AL I
Sbjct: 424 GCLLGKGGSIITEMRKKSGAHIRILGKDK---VPKCASEDEEVIQVNGEIEAVHEALLQI 480
Query: 212 SA-IMYKFSPREDIPLETTVREAPPSIIIPSDVPI------YP---------PGGLYPNA 255
+ + + F R++ PS+ PS+ P +P P G+Y +
Sbjct: 481 TTRLKHHF-----------FRDSYPSVNYPSNSPFLDQLPPFPPYLGRRGLSPPGMYSDL 529
Query: 256 DPI-----LPSRSVPSILGAARVPDLQGYADTGNTW--------------PVYSTG-LSL 295
P P P+ L P L + W P + G
Sbjct: 530 GPPPSHAGFPLDDRPAFLNNIHRPGLPPHISQRKPWGPLGVLEGGTPIGLPDFPRGPPRR 589
Query: 296 VSGLVGASQS--EELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDEC 353
+SG G SQ + V+ P + + G+ G +K I Q S A I + D K E
Sbjct: 590 ISGFAGGSQPIITSTTVEVVVPRAVVPVIYGEDGECLKQILQISDANITITDPKPGAVET 649
Query: 354 VITVTAIESPDDIKSMAVEAVLL 376
I ++ ++A ++
Sbjct: 650 KIIISGTPEQTHAAQSLIQAFVM 672
>gi|113205451|gb|AAW28569.2| KH domain containing protein, putative [Solanum demissum]
Length = 600
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 161/470 (34%), Positives = 251/470 (53%), Gaps = 51/470 (10%)
Query: 5 GKRYRSQRDNDR-DGKNQKRRINEKDEKG-NEESVIYRILCPDGVIGSVIGKSGKVINSI 62
GKR +S+ D R DG ++ +EK+ E ++R LCP G IGS+IG G + +
Sbjct: 9 GKRMQSESDYSRSDGSKRRTPTDEKESNSIGPEDTVFRYLCPTGKIGSIIGVGGDIAKQL 68
Query: 63 RQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAI 122
R ET +++++ + PG ++RVVTIYS E+ V ++ D + AQDAL +VH +
Sbjct: 69 RTETNSKIRISETIPGCEERVVTIYS---GSEETNVSEDTGDL--ISPAQDALFRVHDRV 123
Query: 123 ANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASE 182
A D D + ++ ++LVPS Q +IGK G I+ LRS+T I+V +SE
Sbjct: 124 L-AEDLRMDEDLEDHQQITVRMLVPSDQIGCVIGKGGQVIQNLRSETGAQIRVL---SSE 179
Query: 183 PTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSD 242
CA+ D + I+GE VKKAL+ ++A ++ R L ++ PSI
Sbjct: 180 HLPPCALNSDELLQITGEGAVVKKALYQVAARLHDNPSRSQHQLLSS-----PSIFRSGA 234
Query: 243 VPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGA 302
+ P G ++G V L G + Y + G +
Sbjct: 235 GLVNPHAGT--------------QVMG---VTSLMG------PYASYKS-----DGRSRS 266
Query: 303 SQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIES 362
S +E +R++CP +G VIGKGGG IK +RQ SGA I VD D+C+I V+A E+
Sbjct: 267 SSVKEFAVRLVCPTENVGAVIGKGGGIIKQLRQESGASIKVDSAAAEGDDCIIFVSAKEA 326
Query: 363 PDDIKSMAVEAVLLLQTKINDED-----DDTVTIRLLVSSKVIGCIIGKSGSIINEIRKR 417
+D +S ++A + LQ + +++ D +T RLLV S +GC+IGK GSIINE+R
Sbjct: 327 FED-QSPTIDATMRLQPRSSEKTEKESGDAILTTRLLVPSSRVGCLIGKGGSIINEMRNS 385
Query: 418 TKADVRI-SKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALK 466
T+A +R+ SK + PK A +DE+V++ G+ +AL+Q+++RLR + +
Sbjct: 386 TRASIRVLSKENLPKVASEDDEMVQITGDANVAANALLQVLMRLRANTFE 435
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 91/310 (29%), Positives = 148/310 (47%), Gaps = 52/310 (16%)
Query: 306 EELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTA------ 359
E+ V R LCP KIG +IG GG K +R + ++I + +T +E V+T+ +
Sbjct: 41 EDTVFRYLCPTGKIGSIIGVGGDIAKQLRTETNSKIRISETIPGCEERVVTIYSGSEETN 100
Query: 360 -IESPDDIKSMAVEAVLLLQTKI---------NDEDDDTVTIRLLVSSKVIGCIIGKSGS 409
E D+ S A +A+ + ++ + ED +T+R+LV S IGC+IGK G
Sbjct: 101 VSEDTGDLISPAQDALFRVHDRVLAEDLRMDEDLEDHQQITVRMLVPSDQIGCVIGKGGQ 160
Query: 410 IINEIRKRTKADVRI-SKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDR 468
+I +R T A +R+ S P CA +DEL+++ GE V+ AL Q+ RL D+ +
Sbjct: 161 VIQNLRSETGAQIRVLSSEHLPPCALNSDELLQITGEGAVVKKALYQVAARLHDNPSR-- 218
Query: 469 DGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGS 528
S++ + + I+ SG G+ P +G ++ +SL G
Sbjct: 219 --SQHQLLSSPSIFRSGAGLVNPH--------------------AGTQVMGVTSLMG--- 253
Query: 529 LSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIE 588
PY S S + + ++ P VG VIGK G + +R+ SGA+I+
Sbjct: 254 ------PYASYKS-DGRSRSSSVKEFAVRLVCPTENVGAVIGKGGGIIKQLRQESGASIK 306
Query: 589 MSDSKSSRGD 598
+ DS ++ GD
Sbjct: 307 V-DSAAAEGD 315
>gi|302142130|emb|CBI19333.3| unnamed protein product [Vitis vinifera]
Length = 672
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 212/671 (31%), Positives = 338/671 (50%), Gaps = 73/671 (10%)
Query: 9 RSQRDNDRDGKNQKR---RINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQE 65
RS D++ GK QK + K + +V++R+LCP GSVIGK G +I+ IRQE
Sbjct: 14 RSLTDSNGKGKWQKSGGFYSQNQSLKISPGTVVFRVLCPASKTGSVIGKGGTIISQIRQE 73
Query: 66 TRARVKVVDPFPGAKDRVVTIYSHVKDKE---DVEVDDEFNDKEPLCAAQDALLKVHAAI 122
T +V+V + G +RVV I KD E + +D+ ++ + + Q ALL V +
Sbjct: 74 TGVKVRVEETVSGCDERVVLITGSDKDTEADNEQSKEDDSQVEKGISSVQKALLLVFERM 133
Query: 123 ANAVA--NATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDA 180
A + N D D + ++LV SSQ ++GK G+ IK++ +++ I++ P+D
Sbjct: 134 AEGESETNGGDEDSNKSPTFVVRLLVLSSQVGCLLGKGGSVIKQMSAESGAQIRILPRDK 193
Query: 181 SEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIP 240
CA D V I+GE +A K+AL +IS + + PR+ + T + + P
Sbjct: 194 ---LPLCASPSDELVQITGELDACKQALQSISQQLLENPPRDYDIVSTNPTGSSSHLFGP 250
Query: 241 SDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLV 300
P P + P++ P AA V D +++T + SG+
Sbjct: 251 P----LPRSEAQPPPNYSFPAQGAPY---AAGVRDTDYHSNTPQLHKFHE------SGMP 297
Query: 301 GASQSEE-LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTA 359
G + ++ L R+LC ++G +IGKGG IK+++ +G +I V D + ++ VI ++
Sbjct: 298 GWMKPQDILTFRLLCHDERVGGIIGKGGTIIKNLQNETGCEIKVLDGVPDSEDRVIFISG 357
Query: 360 IESPDDIKSMAVEAVLLLQTK----INDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIR 415
PDD S A +AVL +Q++ I D + TV RLLVSS IGC++GK G+II E+R
Sbjct: 358 SAHPDDRISPAQDAVLRVQSRIVRAIPDSKEKTVIARLLVSSTQIGCLLGKGGAIIAEMR 417
Query: 416 KRTKADVRISKGDK-PKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNP 474
K + A +RI D+ PKCA N+E+V++ GE +V++AL+QI RLR +D +P
Sbjct: 418 KLSGAHIRILGKDQIPKCASENEEVVQINGEFEAVQEALLQITTRLRHHHFRDAFSVNHP 477
Query: 475 --PVGADHI-----YSSGTGISMPPLLPSIPP----------VGPLG----YDQRADSGS 513
P D + Y + S P + ++ P + P G +D RA
Sbjct: 478 SNPAFTDQVPPFPPYLARREFSPPGMYSNLGPSFHKFDAVGVLHPHGGFHPHDDRAPFMH 537
Query: 514 GIGMLS----------SSSLYGYGSLSMGDSPYGSMSSYSSKL------YGG-----LPP 552
I L SS+ +G+ L G P G ++ ++ +GG +
Sbjct: 538 SIHRLGIPPHIPERKPSSAPWGHQGLIEGGVPIG-LADFAGGPQRRIPGFGGGNQQAIIT 596
Query: 553 PLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRA 612
T+EV+VP + V + G+ G L IR+IS A I +++ K + V +ISGTPEQ A
Sbjct: 597 STTVEVVVPRSLVPSIYGEDGGCLRQIRQISDAKITITEPKPGASETVIIISGTPEQTHA 656
Query: 613 AENLIQAFIMA 623
A++LIQAF+++
Sbjct: 657 AQSLIQAFVLS 667
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 105/419 (25%), Positives = 179/419 (42%), Gaps = 75/419 (17%)
Query: 12 RDNDRDGKN-QKRRINEKDEKGN---EESVIYRILCPDGVIGSVIGKSGKVINSIRQETR 67
RD D Q + +E G ++ + +R+LC D +G +IGK G +I +++ ET
Sbjct: 277 RDTDYHSNTPQLHKFHESGMPGWMKPQDILTFRLLCHDERVGGIIGKGGTIIKNLQNETG 336
Query: 68 ARVKVVDPFPGAKDRVVTIY--SHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANA 125
+KV+D P ++DRV+ I +H D+ + AQDA+L+V + I A
Sbjct: 337 CEIKVLDGVPDSEDRVIFISGSAHPDDR--------------ISPAQDAVLRVQSRIVRA 382
Query: 126 VANATDNDKKRKEKEE-CQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPT 184
+ ++ KEK ++LV S+Q ++GK GA I +R + I++ KD
Sbjct: 383 IPDS-------KEKTVIARLLVSSTQIGCLLGKGGAIIAEMRKLSGAHIRILGKDQ---I 432
Query: 185 HSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPRE-----------------DIPLE 227
CA E + V I+GE EAV++AL I+ + R+ P
Sbjct: 433 PKCASENEEVVQINGEFEAVQEALLQITTRLRHHHFRDAFSVNHPSNPAFTDQVPPFPPY 492
Query: 228 TTVREAPPSIIIPSDVP----------IYPPGGLYPNAD--PILPS---RSVPSILGAAR 272
RE P + + P ++P GG +P+ D P + S +P + R
Sbjct: 493 LARREFSPPGMYSNLGPSFHKFDAVGVLHPHGGFHPHDDRAPFMHSIHRLGIPPHI-PER 551
Query: 273 VPDLQGYADTGNTWPVYSTGLS--------LVSGLVGASQS---EELVIRVLCPFNKIGR 321
P + G GL+ + G G +Q + V+ P + +
Sbjct: 552 KPSSAPWGHQGLIEGGVPIGLADFAGGPQRRIPGFGGGNQQAIITSTTVEVVVPRSLVPS 611
Query: 322 VIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTK 380
+ G+ GG ++ IRQ S A+I + + K E VI ++ ++A +L +T+
Sbjct: 612 IYGEDGGCLRQIRQISDAKITITEPKPGASETVIIISGTPEQTHAAQSLIQAFVLSETE 670
>gi|242039239|ref|XP_002467014.1| hypothetical protein SORBIDRAFT_01g018300 [Sorghum bicolor]
gi|241920868|gb|EER94012.1| hypothetical protein SORBIDRAFT_01g018300 [Sorghum bicolor]
Length = 542
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 158/475 (33%), Positives = 256/475 (53%), Gaps = 62/475 (13%)
Query: 3 DSGKRYRS---QRDNDRDGKNQKRRINEKDEKGNEES----VIYRILCPDGVIGSVIGKS 55
D GK RS +R +++R+N + + + S IYRILCP IGSV+G+
Sbjct: 2 DYGKSRRSNSKKRTYSNSEDRKRKRLNSRHDDTSMSSEPVETIYRILCPVKKIGSVLGRG 61
Query: 56 GKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKE------DVEVDDEFNDKEPLC 109
G V+ ++R+ET+A+++V DP PGA +RV+ I+++ E + + D + +P C
Sbjct: 62 GDVVKALREETKAKIRVADPIPGADERVIIIFNYQNQPELTDEAAETKFSDGLGNMKPHC 121
Query: 110 AAQDALLKVHAAI-ANAVANATDNDKKRKEKEE--CQILVPSSQSANIIGKAGATIKRLR 166
AQDALLK+H I A+ + + +++K + ++ +ILV +Q ++GK G+ I++LR
Sbjct: 122 FAQDALLKIHDKIVADEIHDGVAHEEKSESADDVTARILVQGNQVGCLLGKGGSIIQQLR 181
Query: 167 SKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPL 226
S T I+V P SE CA++ D V ISG V+KAL+ IS +++ +E+ PL
Sbjct: 182 SDTGAGIRVLP---SEDLPQCALKSDELVQISGAPSLVRKALYEISTRLHQHPRKENRPL 238
Query: 227 ETTV-------REAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQGY 279
E + RE+P I++ + P+ P L+ + P +P
Sbjct: 239 EEIINASTQRKRESP--ILLQHENPMLP--HLHSDHPPPIP------------------- 275
Query: 280 ADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGA 339
Y +GL +++EE IR+LC IG VIGK G +K + Q +GA
Sbjct: 276 -----LLDPYRSGLQY-----HVTETEEFSIRILCASELIGSVIGKSGANVKRVEQQTGA 325
Query: 340 QIDVDDT-KDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKIND-EDDDTVTIRLLVSS 397
+I V + KD E +I V++ E P + S A+EA++LL K++ + + RL+V S
Sbjct: 326 RIKVQEIDKDASGESLIIVSSKEVPSEPISPAIEALILLHDKVSAPSEKRHSSTRLVVPS 385
Query: 398 KVIGCIIGKSGSIINEIRKRTKADVRI-SKGDKPKCADANDELVEVVGEVGSVRD 451
+GCI+G+ G +I E+R+RT A++R+ SK DKPK +DELV+ G++ D
Sbjct: 386 SKVGCILGEGGKVITEMRRRTGAEIRVYSKADKPKYLSFDDELVQTAGQIHGRED 440
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 97/354 (27%), Positives = 158/354 (44%), Gaps = 60/354 (16%)
Query: 302 ASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIE 361
+S+ E + R+LCP KIG V+G+GG +K++R+ + A+I V D DE VI + +
Sbjct: 37 SSEPVETIYRILCPVKKIGSVLGRGGDVVKALREETKAKIRVADPIPGADERVIIIFNYQ 96
Query: 362 SPDDIKSMAVE------------------AVLLLQTKI-------------NDEDDDTVT 390
+ ++ A E A+L + KI E D VT
Sbjct: 97 NQPELTDEAAETKFSDGLGNMKPHCFAQDALLKIHDKIVADEIHDGVAHEEKSESADDVT 156
Query: 391 IRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRI-SKGDKPKCADANDELVEVVGEVGSV 449
R+LV +GC++GK GSII ++R T A +R+ D P+CA +DELV++ G V
Sbjct: 157 ARILVQGNQVGCLLGKGGSIIQQLRSDTGAGIRVLPSEDLPQCALKSDELVQISGAPSLV 216
Query: 450 RDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRA 509
R AL +I RL K+ N P+ S+ P LL P+ P + +
Sbjct: 217 RKALYEISTRLHQHPRKE-----NRPLEEIINASTQRKRESPILLQHENPMLPHLH---S 268
Query: 510 DSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVI 569
D I +L PY S Y + ++ +L + +G VI
Sbjct: 269 DHPPPIPLL---------------DPYRSGLQY----HVTETEEFSIRILCASELIGSVI 309
Query: 570 GKAGSNLANIRKISGATIEMSD-SKSSRGDRVALISGTPEQKRAAENLIQAFIM 622
GK+G+N+ + + +GA I++ + K + G+ + ++S I+A I+
Sbjct: 310 GKSGANVKRVEQQTGARIKVQEIDKDASGESLIIVSSKEVPSEPISPAIEALIL 363
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 132/258 (51%), Gaps = 31/258 (12%)
Query: 377 LQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADAN 436
LQ + + ++ +IR+L +S++IG +IGKSG+ + + ++T A +++ + DK DA+
Sbjct: 284 LQYHVTETEE--FSIRILCASELIGSVIGKSGANVKRVEQQTGARIKVQEIDK----DAS 337
Query: 437 DELVEVVG--EVGS--VRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSGTGISMP- 491
E + +V EV S + A+ +IL L D+ + P H S T + +P
Sbjct: 338 GESLIIVSSKEVPSEPISPAIEALIL------LHDKVSA---PSEKRH---SSTRLVVPS 385
Query: 492 -PLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSS-YSSKLYGG 549
+ + G + + R +G+ I + S + Y LS D + + + Y G
Sbjct: 386 SKVGCILGEGGKVITEMRRRTGAEIRVYSKADKPKY--LSFDDELVQTAGQIHGREDYRG 443
Query: 550 LPPPL----TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISG 605
L T+E+ +P +++ ++G G NLA IR+ISGA + + ++ + + V I G
Sbjct: 444 LTSATGFLSTIELRIPNSSLESIVGVGGVNLAEIRQISGARLRLHEAHAGSSESVVEIQG 503
Query: 606 TPEQKRAAENLIQAFIMA 623
T E+ +AA++L+Q FI A
Sbjct: 504 TLEEAKAAQSLLQGFISA 521
>gi|413933964|gb|AFW68515.1| hypothetical protein ZEAMMB73_983755 [Zea mays]
Length = 768
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 164/491 (33%), Positives = 257/491 (52%), Gaps = 58/491 (11%)
Query: 3 DSGKRYRSQRDNDRDGKNQKRRINEKDEKGNEESV--IYRILCPDGVIGSVIGKSGKVIN 60
+S KR S D DGK ++ D + E + IYRILCP IGSV+G+ G ++
Sbjct: 10 NSKKRRHSNSD---DGKRKRLSSRHDDTSMSSEPIETIYRILCPAKKIGSVLGRGGDIVK 66
Query: 61 SIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKE------DVEVDDEFNDKEPLCAAQDA 114
++R+ET+A+++V D PGA +RV+ I+++ E + ++ D + +P C AQDA
Sbjct: 67 ALREETKAKIRVADSIPGADERVIIIFNYQNQPELTDEAAEKQISDGLGNMKPHCFAQDA 126
Query: 115 LLKVHAAI-ANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSI 173
LLK+H I A+ + + +D+ + +ILV +Q ++GK G+ I++LRS T I
Sbjct: 127 LLKIHDKIVADEIYDEVAHDES-SDDVTARILVQGNQVGCLLGKGGSIIQQLRSDTGAGI 185
Query: 174 KVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLE------ 227
+V +SE CA++ D V ISG V+KAL+ IS +++ +E+ PLE
Sbjct: 186 RVL---SSENLPQCALQSDELVQISGAPSLVRKALYEISTRLHQHPRKENRPLEQIIDAS 242
Query: 228 TTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTWP 287
T + P++ + + + P + P RS P +P
Sbjct: 243 TQRKHESPTLQHENPMLPHLHSHHPPPIPLLDPYRSGPQ-------------------YP 283
Query: 288 VYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDT- 346
V S++EE IR+LC IG VIGK G ++ + Q +GA+I V +
Sbjct: 284 V--------------SETEEFSIRILCASELIGSVIGKSGANVRRVEQQTGARIKVQEID 329
Query: 347 KDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKIN-DEDDDTVTIRLLVSSKVIGCIIG 405
KD E +I V++ E P + S +EA++LL K++ + + RL+V S +GCI+G
Sbjct: 330 KDASGERLIIVSSNEIPTEPISPTIEALILLHDKVSASSEKHHSSTRLVVPSNKVGCILG 389
Query: 406 KSGSIINEIRKRTKADVRI-SKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDA 464
+ G +I E+R+RT A++R+ SK DKPK DELV+V G R AL +I RLR
Sbjct: 390 EGGQVITEMRRRTGAEIRVYSKADKPKYLSFGDELVQVAGPPAIARGALTEIASRLRTRT 449
Query: 465 LKDRDGSRNPP 475
L+D + NPP
Sbjct: 450 LRDTSTANNPP 460
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 46/69 (66%)
Query: 555 TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAE 614
T+E+ +P +++ ++G G NLA IR+ISGA + + ++ + + V I GT +Q +AA+
Sbjct: 681 TIELRIPNSSLESIVGVGGVNLAEIRQISGARLRLHEAHAGSSESVVEIQGTLDQAKAAQ 740
Query: 615 NLIQAFIMA 623
+L++ FI A
Sbjct: 741 SLLEGFISA 749
>gi|297807547|ref|XP_002871657.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297317494|gb|EFH47916.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 544
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 183/560 (32%), Positives = 288/560 (51%), Gaps = 83/560 (14%)
Query: 6 KRYRSQRDNDRDGKNQKR-RINEKDEKG-NEESVIYRILCPDGVIGSVIGKSGKVINSIR 63
KR R Q D D +G +++R R +++D + + ++R LCP IGSVIG+ G+++ +R
Sbjct: 11 KRSRPQSDYDDNGGSKRRYRGDDRDSLVIDRDDTVFRYLCPVKKIGSVIGRGGEIVKQLR 70
Query: 64 QETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEP-LCAAQDALLKVHAAI 122
+TR+++++ + PG +RV+TIYS + + F D E L AQDAL ++H +
Sbjct: 71 MDTRSKIRIGEAIPGCDERVITIYSPSDET------NAFGDGEKVLSPAQDALFRIHDRV 124
Query: 123 ANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASE 182
A + D+ + +++ ++LVPS Q I+G+ G ++ +RS+T I++ KD +
Sbjct: 125 VADDAQSEDSSEG-EQQVTAKLLVPSDQIGCILGRGGQIVQNIRSETGAQIRII-KDRNM 182
Query: 183 PTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSD 242
P CA+ D + ISGE VKKAL I++ +++ R L + +
Sbjct: 183 PL--CALNSDELIQISGEVLIVKKALHQIASRLHENPSRSQNLLSSAISGG--------- 231
Query: 243 VPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTW--PVYSTGLSLVSGLV 300
YP G L +A P ++G A P + Y G W P+Y +
Sbjct: 232 ---YPSGSLMSHA-------GGPRLVGIA--PLMGSYGRDGGDWSRPLYQPPRN------ 273
Query: 301 GASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAI 360
+ E IR++ P I VIGKGG I +RQ + A I VD ++ ++C+IT++A
Sbjct: 274 -DPPATEFFIRLVSPVENIASVIGKGGALINQLRQETRATIKVDSSRTEGNDCLITISAR 332
Query: 361 ESPDDIKSMAVEAVLLLQTKIND--EDDD---TVTIRLLVSSKVIGCIIGKSGSIINEIR 415
E +D S +EAV+ LQ K ++ E D + T RLLV S IGCI+GK G+II E+R
Sbjct: 333 EVFEDAYSPTIEAVMRLQPKCSEKVERDSGLVSFTTRLLVPSSRIGCILGKGGAIITEMR 392
Query: 416 KRTKADVRI-SKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNP 474
+ TKA++RI K + PK A +DE+V++ GE+ ++AL+QI RLR + DR+G+ +
Sbjct: 393 RMTKANIRILGKENLPKVASDDDEMVQISGELDVAKEALIQITSRLRANVF-DREGAVS- 450
Query: 475 PVGADHIYSSGTGISMPPLLPSIPPVGP-----LGYDQRAD----------SGSGIGMLS 519
++ P+LP + PV P L YD R G G LS
Sbjct: 451 --------------ALMPVLPYV-PVAPDSGDRLDYDSRDSRRLERGNPYPGGYGSSGLS 495
Query: 520 SSSLYGYGSLSMGDS--PYG 537
+ YG+ G S PYG
Sbjct: 496 AEGYSSYGAPVGGSSSTPYG 515
>gi|356531744|ref|XP_003534436.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 540
Score = 235 bits (600), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 195/578 (33%), Positives = 279/578 (48%), Gaps = 89/578 (15%)
Query: 5 GKRYRSQRDNDRDGKNQKRRINEKDEKGNE----ESVIYRILCPDGVIGSVIGKSGKVIN 60
GKR S D+D KN KRR DE + + ++R LCP IGSVIG+ G ++
Sbjct: 9 GKRSHSHSDSDAGSKN-KRRNPAADESSSSLITADDTVFRYLCPVRKIGSVIGRGGDIVK 67
Query: 61 SIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCA-AQDALLKVH 119
+R +T+A++++ D PG +RVVTI+S E + F++ + L + AQDAL +VH
Sbjct: 68 QLRADTKAKIRIGDALPGCDERVVTIHS------SSEETNHFDETDDLVSPAQDALFRVH 121
Query: 120 AAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKD 179
+ A + + + ++LVPS Q +IGK G ++ +RS+T I++ D
Sbjct: 122 QRVIAEDAREDE--DEERNHVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDD 179
Query: 180 ASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSIII 239
P CA+ D V ISGE+ VKKALF I+A + R L + V
Sbjct: 180 RLPP---CALSTDELVQISGEAAVVKKALFQIAAQIRDNPSRSQHLLASAV--------- 227
Query: 240 PSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQGY-ADTGNTWPVYSTGLSLVSG 298
PGG P P + A V GY DTG+ W SL
Sbjct: 228 --------PGGYATGG----PGAGAPIMGVAPFVGAYGGYKGDTGD-WS-----RSLYPA 269
Query: 299 LVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
+ E +R +CP IG VIGKGG I IRQ SGA I VD + D+C+I ++
Sbjct: 270 PRDEASMREFSVRFVCPTGNIGGVIGKGGAIINQIRQDSGATIKVDSSATEGDDCLIIIS 329
Query: 359 AIESPDDIKSMAVEAVLLLQTKIND--EDDD---TVTIRLLVSSKVIGCIIGKSGSIINE 413
E +D S +EA + LQ + ++ E D + T RLLV + IGC+IGK G+I+ E
Sbjct: 330 TKEFFEDSFSPTIEAAVRLQPRCSEKVERDSGIVSFTTRLLVPTSRIGCLIGKGGTIVTE 389
Query: 414 IRKRTKADVRI-SKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDAL-KDRDGS 471
+R+ TKA++RI SK + PK A +DE+V++ G++ +DALVQ + RLR + K+R S
Sbjct: 390 MRRLTKANIRILSKDNLPKIASEDDEMVQISGDLDVAKDALVQALTRLRANLFDKERAVS 449
Query: 472 RNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQR-------------------ADSG 512
PV +P L S+ L YD R SG
Sbjct: 450 GFLPV-------------LPYLPASVDGSDGLNYDSRDGKRHGRGGYSGGYGGSSDLASG 496
Query: 513 SGIGMLSSSSL----YGYGSLSMG-DSPYGSMSSYSSK 545
G G +S L YG+ S+G S YGS + SS+
Sbjct: 497 DGYGSYGNSQLGSSGGAYGNYSLGRTSAYGSSQNGSSR 534
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/331 (32%), Positives = 160/331 (48%), Gaps = 66/331 (19%)
Query: 305 SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTA----- 359
+++ V R LCP KIG VIG+GG +K +R + A+I + D DE V+T+ +
Sbjct: 41 ADDTVFRYLCPVRKIGSVIGRGGDIVKQLRADTKAKIRIGDALPGCDERVVTIHSSSEET 100
Query: 360 --IESPDDIKSMAVEAVLLLQTKI--------NDEDDDTVTIRLLVSSKVIGCIIGKSGS 409
+ DD+ S A +A+ + ++ DE+ + VT +LLV S IGC+IGK G
Sbjct: 101 NHFDETDDLVSPAQDALFRVHQRVIAEDAREDEDEERNHVTAKLLVPSDQIGCVIGKGGQ 160
Query: 410 IINEIRKRTKADVRISKGDK-PKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDR 468
I+ IR T A +RI K D+ P CA + DELV++ GE V+ AL QI ++RD+
Sbjct: 161 IVQNIRSETGAQIRILKDDRLPPCALSTDELVQISGEAAVVKKALFQIAAQIRDNP---- 216
Query: 469 DGSRNPPVGADHI---YSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYG 525
SR+ + A + Y++G + P++ P VG G G
Sbjct: 217 --SRSQHLLASAVPGGYATGGPGAGAPIMGVAPFVGAYG--------------------G 254
Query: 526 YGSLSMGDSPYGSMSSYSSKLYGGLPPP--------LTLEVLVPANAVGKVIGKAGSNLA 577
Y G +S LY P P ++ + P +G VIGK G+ +
Sbjct: 255 Y---------KGDTGDWSRSLY---PAPRDEASMREFSVRFVCPTGNIGGVIGKGGAIIN 302
Query: 578 NIRKISGATIEMSDSKSSRGDRVALISGTPE 608
IR+ SGATI++ DS ++ GD +I T E
Sbjct: 303 QIRQDSGATIKV-DSSATEGDDCLIIISTKE 332
>gi|225443339|ref|XP_002264125.1| PREDICTED: KH domain-containing protein At4g18375 [Vitis vinifera]
gi|297735779|emb|CBI18466.3| unnamed protein product [Vitis vinifera]
Length = 704
Score = 235 bits (599), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 204/688 (29%), Positives = 322/688 (46%), Gaps = 145/688 (21%)
Query: 37 VIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH-VKDKED 95
V++RILCP G VIGK G +I R++T A++++ D G +RV+ I + VK K +
Sbjct: 56 VLFRILCPATKTGGVIGKGGAIIRQFREDTGAKIRIDDSVLGCDERVILIVADAVKSKRE 115
Query: 96 VEVDDEFNDKEPLCAAQDALLKVHAAIANAVAN--ATDNDKKRKEKEE------------ 141
+C A+ + A ++N+ N A D+D+ ++
Sbjct: 116 ASA---------ICGAEANDGEESANLSNSSPNPVAVDDDESSPAQQALVRVFERILKVD 166
Query: 142 ------------------CQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEP 183
C++L PS+Q ++G+ G ++++R ++ I+V PKD
Sbjct: 167 EEREEKEKKEDLGNVAVCCRLLAPSNQVGCVLGRGGKIVEKIRQESGAQIRVLPKDH--- 223
Query: 184 THSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDV 243
+CA D + I+G AV+KAL +S+ + +PR D +
Sbjct: 224 IPACASPGDELIQITGTFPAVRKALLLVSSCLQD-NPRADATNSAAAK------------ 270
Query: 244 PIYPPGGLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGL--VG 301
P GG+ L +P L + P +GY + + +S G S + G +G
Sbjct: 271 ---PTGGM-------LHGNGMPGQLDS--FPQ-RGYGSSLHGPDYHSRGYSSMPGPENIG 317
Query: 302 ASQ----SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITV 357
A+ EE+V ++LC F K+G +IGKGG I+ ++ +GA I + D + DE V+ +
Sbjct: 318 ANHRMVLEEEVVFKLLCHFEKVGSLIGKGGSIIRFLQSETGASIKIADAAPDSDERVVVI 377
Query: 358 TAIESPDDIKSMAVEAVLLLQTKIND---EDDDTVTIRLLVSSKVIGCIIGKSGSIINEI 414
+A E+ + S A +AV+ + +I + E V RLLV S+ IGC++GK G II+E+
Sbjct: 378 SARENLEQKHSPAQDAVIRVHCRIAEIGFEPGAAVVARLLVHSQQIGCLLGKGGIIISEM 437
Query: 415 RKRTKADVRI-SKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRN 473
R+ T A +RI +K PKC NDELV+V+G + SV+DAL +I R+R+ + N
Sbjct: 438 RRATGASIRIFAKEQVPKCGSQNDELVQVIGSLQSVQDALFRITSRIRETIFPLKPSISN 497
Query: 474 ---PPVGADHIYSSGTGISMPPLL-----PSIP-----PVG-PLGYDQRADSG------- 512
PP Y S PP+ P+ P PVG P G D+ A G
Sbjct: 498 VNGPP------YMSSFPEIPPPMFRPRHDPASPGHYSSPVGVPHGIDRSAVPGHPLDHQS 551
Query: 513 ---SGIGMLSSSSL----YGYGSLSMGDSPYGSMSSYSSKLY---------------GGL 550
G+ + S+L Y YG G P S S +++ G L
Sbjct: 552 SFSHGVDRIGPSNLDRAPYPYGGDRPGHGPPFDRPSSSPRMWTQGVSGNLRGTDVGSGSL 611
Query: 551 P----PP-----------LTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSS 595
PP T+EV VP + V G+ SNL IR+ISGA + + D ++
Sbjct: 612 ASRNGPPGSGSQAPNITTTTVEVAVPQALLSHVYGENNSNLNQIRQISGARVVIQDPRTG 671
Query: 596 RGDRVALISGTPEQKRAAENLIQAFIMA 623
+ V ++SGTP+Q RAA++L+QAFI++
Sbjct: 672 SSEGVVVVSGTPDQTRAAQSLVQAFILS 699
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 103/375 (27%), Positives = 156/375 (41%), Gaps = 107/375 (28%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTA------- 359
+++ R+LCP K G VIGKGG I+ R+ +GA+I +DD+ DE VI + A
Sbjct: 55 QVLFRILCPATKTGGVIGKGGAIIRQFREDTGAKIRIDDSVLGCDERVILIVADAVKSKR 114
Query: 360 --------------------------IESPDDIKSMAVEAVLLLQTKI------------ 381
+ DD S A +A++ + +I
Sbjct: 115 EASAICGAEANDGEESANLSNSSPNPVAVDDDESSPAQQALVRVFERILKVDEEREEKEK 174
Query: 382 -NDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDK-PKCADANDEL 439
D + V RLL S +GC++G+ G I+ +IR+ + A +R+ D P CA DEL
Sbjct: 175 KEDLGNVAVCCRLLAPSNQVGCVLGRGGKIVEKIRQESGAQIRVLPKDHIPACASPGDEL 234
Query: 440 VEVVGEVGSVRDALVQIILRLRDDALKDRDGS--RNPPVGADHIYSSGTGISMPPLLPSI 497
+++ G +VR AL+ + L+D+ D S P G H G MP L S
Sbjct: 235 IQITGTFPAVRKALLLVSSCLQDNPRADATNSAAAKPTGGMLH------GNGMPGQLDSF 288
Query: 498 PPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPP---- 553
P QR GYGS G Y S+ Y +P P
Sbjct: 289 P--------QR----------------GYGSSLHG-------PDYHSRGYSSMPGPENIG 317
Query: 554 ----------LTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALI 603
+ ++L VG +IGK GS + ++ +GA+I+++D+ +RV +I
Sbjct: 318 ANHRMVLEEEVVFKLLCHFEKVGSLIGKGGSIIRFLQSETGASIKIADAAPDSDERVVVI 377
Query: 604 SGTPEQKRAAENLIQ 618
S A ENL Q
Sbjct: 378 S-------ARENLEQ 385
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 104/398 (26%), Positives = 172/398 (43%), Gaps = 79/398 (19%)
Query: 34 EESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDK 93
EE V++++LC +GS+IGK G +I ++ ET A +K+ D P + +RVV I + +
Sbjct: 325 EEEVVFKLLCHFEKVGSLIGKGGSIIRFLQSETGASIKIADAAPDSDERVVVISA----R 380
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
E++E + AQDA+++VH IA R +LV S Q
Sbjct: 381 ENLE--------QKHSPAQDAVIRVHCRIAEIGFEPGAAVVAR-------LLVHSQQIGC 425
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISA 213
++GK G I +R T SI++ A E C + D V + G ++V+ ALF I++
Sbjct: 426 LLGKGGIIISEMRRATGASIRIF---AKEQVPKCGSQNDELVQVIGSLQSVQDALFRITS 482
Query: 214 ----IMYKFSPR----EDIPLETTVREAPPSIIIPSDVPIYP---------PGGLYPNAD 256
++ P P ++ E PP + P P P P G+ +A
Sbjct: 483 RIRETIFPLKPSISNVNGPPYMSSFPEIPPPMFRPRHDPASPGHYSSPVGVPHGIDRSAV 542
Query: 257 PILP-----------SRSVPSILGAARVP---DLQGYA---DTGNTWP-VYSTGLS---- 294
P P R PS L A P D G+ D ++ P +++ G+S
Sbjct: 543 PGHPLDHQSSFSHGVDRIGPSNLDRAPYPYGGDRPGHGPPFDRPSSSPRMWTQGVSGNLR 602
Query: 295 ---LVSGLVGA--------SQSEEL---VIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQ 340
+ SG + + SQ+ + + V P + V G+ + IRQ SGA+
Sbjct: 603 GTDVGSGSLASRNGPPGSGSQAPNITTTTVEVAVPQALLSHVYGENNSNLNQIRQISGAR 662
Query: 341 IDVDDTKDNRDECVITVTAIESPDDIKSMA--VEAVLL 376
+ + D + E V+ V+ +PD ++ V+A +L
Sbjct: 663 VVIQDPRTGSSEGVVVVSG--TPDQTRAAQSLVQAFIL 698
Score = 39.3 bits (90), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 27/38 (71%)
Query: 36 SVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV 73
+V R+L P +G V+G+ GK++ IRQE+ A+++V+
Sbjct: 182 AVCCRLLAPSNQVGCVLGRGGKIVEKIRQESGAQIRVL 219
>gi|356518382|ref|XP_003527858.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 676
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 199/667 (29%), Positives = 311/667 (46%), Gaps = 107/667 (16%)
Query: 36 SVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKED 95
SV++R+LC IG VIGK G +I+ IRQET ++++ + PG +RV+TI K+ E+
Sbjct: 33 SVVFRLLCHASRIGGVIGKGGSIISQIRQETGVKLRIEEAVPGCDERVITISGSEKETEE 92
Query: 96 --VEVDDEFNDKE---------------------------PL---------CAAQDALLK 117
E E ND + P+ A A+
Sbjct: 93 DNTEQGKEVNDNDDGGSEGKDREEKDDGDGNEDKREKDAVPVEDSKSEKGNSAIWKAISL 152
Query: 118 VHAAIANAVANATDNDKKRKEKEE--CQILVPSSQSANIIGKAGATIKRLRSKTRTSIKV 175
V + V T+ D++ + ++L+ ++Q ++GK G+ IKR+ +++ I++
Sbjct: 153 VFERMVEGVEETTEGDEESNKPSSFFLRLLILTAQVGCVLGKGGSVIKRMAAESGAQIRI 212
Query: 176 TPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPP 235
PKD +CA D V ISG E V+KAL ++S + + PR+ L
Sbjct: 213 LPKDK---LPACASASDEIVQISGSVEVVRKALQSVSQQLLENPPRDHDSLSAK------ 263
Query: 236 SIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTWPVYSTGLSL 295
S P G +P + ++ P G D+ + P + +
Sbjct: 264 -----STGPSSHSFGQFPPHNRSFSAQGEPFASGPH---DISAFHSAAPLIPKFHE--AA 313
Query: 296 VSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVI 355
+ G + Q E L R+LCP ++G +IGKGG IK+++Q + ++I V + + ++CVI
Sbjct: 314 IHGRMRPLQ-EMLTFRLLCPAERVGNIIGKGGAIIKTVQQETASEIKVLEAPPDSEDCVI 372
Query: 356 TVTAIESPDDIKSMAVEAVLLLQTKIN----DEDDDTVTIRLLVSSKVIGCIIGKSGSII 411
++ P+D S EAV +QT+I D D + R LVSS IGC++GK GSII
Sbjct: 373 VISGPAHPEDRISPVQEAVFRVQTRIAKPIPDAKDHIMLARFLVSSTQIGCLLGKGGSII 432
Query: 412 NEIRKRTKADVRISKGDK-PKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDG 470
E+RK++ A +RI DK PKCA ++E+++V GE+ +V DAL+QI RL+ +D
Sbjct: 433 TEMRKKSGAHIRILGKDKVPKCASEDEEVIQVNGEIEAVHDALLQITTRLKHHCFRDSYP 492
Query: 471 SRNPP-----------------------------VGADHIYSSGTGISMPPLLPSI--PP 499
S N P +G H ++ PP L SI P
Sbjct: 493 SVNYPSNSPFLDQLPPFPPYLGRRGLSPPRMYSDLGHPHPHAGFPLDDRPPFLNSIHRPG 552
Query: 500 VGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLT---L 556
+ P +++ GI L G + + D P G S GG P +T +
Sbjct: 553 LPPHISERKPWGPQGI-------LEGGIPIGLPDFPGGPPRRISG-FAGGSQPIITSTTV 604
Query: 557 EVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENL 616
EV+VP V + G+ G L I +IS A I ++D K + +ISGTPEQ AA++L
Sbjct: 605 EVVVPRAVVPVIYGEDGECLKQILQISDANITITDPKPGTVETKIIISGTPEQTHAAQSL 664
Query: 617 IQAFIMA 623
IQAF+M+
Sbjct: 665 IQAFVMS 671
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 91/382 (23%), Positives = 160/382 (41%), Gaps = 72/382 (18%)
Query: 34 EESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIY--SHVK 91
+E + +R+LCP +G++IGK G +I +++QET + +KV++ P ++D V+ I +H +
Sbjct: 322 QEMLTFRLLCPAERVGNIIGKGGAIIKTVQQETASEIKVLEAPPDSEDCVIVISGPAHPE 381
Query: 92 DKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQS 151
D+ + Q+A+ +V IA + +A D+ + LV S+Q
Sbjct: 382 DR--------------ISPVQEAVFRVQTRIAKPIPDAKDHIML------ARFLVSSTQI 421
Query: 152 ANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAI 211
++GK G+ I +R K+ I++ KD CA E + + ++GE EAV AL I
Sbjct: 422 GCLLGKGGSIITEMRKKSGAHIRILGKDK---VPKCASEDEEVIQVNGEIEAVHDALLQI 478
Query: 212 SAIMYKFSPREDIPLETTVREAPPSIIIPSDVPI------YPP----GGL---------- 251
+ + R++ PS+ PS+ P +PP GL
Sbjct: 479 TTRLKHH----------CFRDSYPSVNYPSNSPFLDQLPPFPPYLGRRGLSPPRMYSDLG 528
Query: 252 YPNADPILPSRSVPSILGAARVPDLQGYADTGNTW---PVYSTGLSL------------V 296
+P+ P P L + P L + W + G+ + +
Sbjct: 529 HPHPHAGFPLDDRPPFLNSIHRPGLPPHISERKPWGPQGILEGGIPIGLPDFPGGPPRRI 588
Query: 297 SGLVGASQS--EELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECV 354
SG G SQ + V+ P + + G+ G +K I Q S A I + D K E
Sbjct: 589 SGFAGGSQPIITSTTVEVVVPRAVVPVIYGEDGECLKQILQISDANITITDPKPGTVETK 648
Query: 355 ITVTAIESPDDIKSMAVEAVLL 376
I ++ ++A ++
Sbjct: 649 IIISGTPEQTHAAQSLIQAFVM 670
>gi|30685269|ref|NP_851040.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|30685276|ref|NP_197031.3| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|110737265|dbj|BAF00580.1| hypothetical protein [Arabidopsis thaliana]
gi|110738501|dbj|BAF01176.1| hypothetical protein [Arabidopsis thaliana]
gi|332004758|gb|AED92141.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|332004759|gb|AED92142.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 548
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 187/565 (33%), Positives = 290/565 (51%), Gaps = 84/565 (14%)
Query: 6 KRYRSQRDNDRDGKNQKR-RINEKDEKG-NEESVIYRILCPDGVIGSVIGKSGKVINSIR 63
KR R Q D D +G +++R R +++D + + ++R LCP IGSVIG+ G ++ +R
Sbjct: 17 KRSRPQSDYDDNGGSKRRYRGDDRDSLVIDRDDTVFRYLCPVKKIGSVIGRGGDIVKQLR 76
Query: 64 QETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEP-LCAAQDALLKVHAAI 122
+TR+++++ + PG +RV+TIYS + + F D E L AQDAL ++H +
Sbjct: 77 NDTRSKIRIGEAIPGCDERVITIYSPSDET------NAFGDGEKVLSPAQDALFRIHDRV 130
Query: 123 ANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASE 182
A + D+ + K+ ++LVPS Q I+G+ G ++ +RS+T I++ KD +
Sbjct: 131 VADDARSEDSPEGEKQVT-AKLLVPSDQIGCILGRGGQIVQNIRSETGAQIRIV-KDRNM 188
Query: 183 PTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSD 242
P CA+ D + ISGE VKKAL I++ +++ R L ++
Sbjct: 189 PL--CALNSDELIQISGEVLIVKKALLQIASRLHENPSRSQNLLSSSGG----------- 235
Query: 243 VPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTW--PVYSTGLSLVSGLV 300
YP G L +A P ++G A P + Y W P+Y +
Sbjct: 236 ---YPAGSLMSHA-------GGPRLVGLA--PLMGSYGRDAGDWSRPLYQPPRN------ 277
Query: 301 GASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAI 360
+ E IR++ P I VIGKGG I +RQ + A I VD ++ ++C+IT++A
Sbjct: 278 -DPPATEFFIRLVSPVENIASVIGKGGALINQLRQETRATIKVDSSRTEGNDCLITISAR 336
Query: 361 ESPDDIKSMAVEAVLLLQTKIND--EDDD---TVTIRLLVSSKVIGCIIGKSGSIINEIR 415
E +D S +EAV+ LQ K +D E D + T RLLV S IGCI+GK G+II E+R
Sbjct: 337 EVFEDAYSPTIEAVMRLQPKCSDKVERDSGLVSFTTRLLVPSSRIGCILGKGGAIITEMR 396
Query: 416 KRTKADVRI-SKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNP 474
+ TKA++RI K + PK A +DE+V++ GE+ ++AL+QI RLR + DR+G+ +
Sbjct: 397 RMTKANIRILGKENLPKVASDDDEMVQISGELDVAKEALIQITSRLRANVF-DREGAVS- 454
Query: 475 PVGADHIYSSGTGISMPPLLPSIPPVGP-----LGYDQRADSGSGIGMLSSSSLY--GYG 527
++ P+LP + PV P YD R L + Y GYG
Sbjct: 455 --------------ALMPVLPYV-PVAPDAGDRFDYDSRDSR-----RLERGNPYPGGYG 494
Query: 528 SLSM---GDSPYGS-MSSYSSKLYG 548
S + G SPYG+ + SS YG
Sbjct: 495 SSGVSAEGYSPYGAPVGGSSSTPYG 519
>gi|357496471|ref|XP_003618524.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355493539|gb|AES74742.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 553
Score = 231 bits (589), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 202/572 (35%), Positives = 302/572 (52%), Gaps = 85/572 (14%)
Query: 5 GKRYRSQRDNDRDGKNQKRRINEKDEKG----NEESVIYRILCPDGVIGSVIGKSGKVIN 60
GKR RSQ D D G ++ + ++ N+E ++R LCP IGS+IG+ G+++
Sbjct: 11 GKRPRSQSDYDGGGNKRRNGGDHDRDREQFVINKEDTVFRYLCPGRKIGSIIGRGGEIVK 70
Query: 61 SIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHA 120
+R ET+A++++ + PG +RVVT+YS + V+ D+ + A+DAL K+H
Sbjct: 71 QLRVETKAKIRIGETVPGCDERVVTVYSSSDETNTVDDGDKL-----VSPAEDALFKIHD 125
Query: 121 AIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDA 180
+ A +D +++ + ++LVPS Q ++GK G ++ LRS+T I++ KD
Sbjct: 126 RVV-AEDLHSDQEEEGGPQVNAKLLVPSDQIGCVLGKGGQIVQNLRSETGAQIRIL-KDD 183
Query: 181 SEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIP 240
P +CA+ D V ISG++ VKKAL I++ ++ R L + V PS
Sbjct: 184 HVP--ACALRSDELVQISGDAAVVKKALHQIASRLHHNPSRTQHLLGSAV----PS---- 233
Query: 241 SDVPIYPPGG--LYPNADPILPSRSVPSILGAARVPDLQGY-ADTGNTWP---VYSTGLS 294
+YP GG + P A P P + A V GY +DTG+ WP +YS
Sbjct: 234 ----VYPSGGSLMGPTAGP-------PIVGMAPLVGPYGGYKSDTGD-WPPRSMYSAPRD 281
Query: 295 LVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECV 354
+ S S+E +R++CP +G VIGKGGG I IRQ SGA I VD + D+C+
Sbjct: 282 EI------SSSKEFSVRLVCPTGNLGGVIGKGGGIINQIRQDSGATIKVDSSAKG-DDCL 334
Query: 355 ITVTAIESPDDIKSMAVEAVLLLQTKINDEDDD-----TVTIRLLVSSKVIGCIIGKSGS 409
IT++ E ++ S VEA +LLQ + +++ + + T RLLVSS IGC+IGK GS
Sbjct: 335 ITISTKEFFEETFSPTVEAAVLLQPRCSEKSERDSGIISFTTRLLVSSSRIGCLIGKGGS 394
Query: 410 IINEIRKRTKADVRI-SKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDR 468
II E+R+ TK+++RI SK + PK A +DE+V++ G++ +DALVQ++ RLR + L DR
Sbjct: 395 IITEMRRLTKSNIRILSKENLPKIASDDDEMVQISGDLDVAKDALVQVLTRLRAN-LFDR 453
Query: 469 DGSRNPPVGADHIYSSGTGISMPPLLPSIP-PV-GP--LGYDQRADSGSGIGM------- 517
+G+ P+LP IP PV GP L Y+ R G G
Sbjct: 454 EGAVP---------------GFLPVLPYIPAPVDGPDVLNYESRDGKRHGRGHSYSSGYG 498
Query: 518 ----LSSSSLYG-YGSLSM-GDSPYGSMSSYS 543
L YG Y S + G S YG SYS
Sbjct: 499 GSSDLGPVDTYGSYASSQLAGGSGYGDYESYS 530
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 105/326 (32%), Positives = 161/326 (49%), Gaps = 52/326 (15%)
Query: 306 EELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITV-------T 358
E+ V R LCP KIG +IG+GG +K +R + A+I + +T DE V+TV
Sbjct: 45 EDTVFRYLCPGRKIGSIIGRGGEIVKQLRVETKAKIRIGETVPGCDERVVTVYSSSDETN 104
Query: 359 AIESPDDIKSMAVEAVLLLQTKINDEDDDT---------VTIRLLVSSKVIGCIIGKSGS 409
++ D + S A +A+ + ++ ED + V +LLV S IGC++GK G
Sbjct: 105 TVDDGDKLVSPAEDALFKIHDRVVAEDLHSDQEEEGGPQVNAKLLVPSDQIGCVLGKGGQ 164
Query: 410 IINEIRKRTKADVRISKGDK-PKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDR 468
I+ +R T A +RI K D P CA +DELV++ G+ V+ AL QI RL + + +
Sbjct: 165 IVQNLRSETGAQIRILKDDHVPACALRSDELVQISGDAAVVKKALHQIASRLHHNPSRTQ 224
Query: 469 D--GSRNPPVGADHIYSSGTGI----SMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSS 522
GS P V Y SG + + PP++ P VGP G ++D+G
Sbjct: 225 HLLGSAVPSV-----YPSGGSLMGPTAGPPIVGMAPLVGPYG-GYKSDTGD--------- 269
Query: 523 LYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKI 582
+ SM +P +SS SK + ++ ++ P +G VIGK G + IR+
Sbjct: 270 ---WPPRSMYSAPRDEISS--SKEF-------SVRLVCPTGNLGGVIGKGGGIINQIRQD 317
Query: 583 SGATIEMSDSKSSRGDRVALISGTPE 608
SGATI++ S++GD + T E
Sbjct: 318 SGATIKV--DSSAKGDDCLITISTKE 341
>gi|357496469|ref|XP_003618523.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355493538|gb|AES74741.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 569
Score = 231 bits (589), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 202/572 (35%), Positives = 302/572 (52%), Gaps = 85/572 (14%)
Query: 5 GKRYRSQRDNDRDGKNQKRRINEKDEKG----NEESVIYRILCPDGVIGSVIGKSGKVIN 60
GKR RSQ D D G ++ + ++ N+E ++R LCP IGS+IG+ G+++
Sbjct: 11 GKRPRSQSDYDGGGNKRRNGGDHDRDREQFVINKEDTVFRYLCPGRKIGSIIGRGGEIVK 70
Query: 61 SIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHA 120
+R ET+A++++ + PG +RVVT+YS + V+ D+ + A+DAL K+H
Sbjct: 71 QLRVETKAKIRIGETVPGCDERVVTVYSSSDETNTVDDGDKL-----VSPAEDALFKIHD 125
Query: 121 AIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDA 180
+ A +D +++ + ++LVPS Q ++GK G ++ LRS+T I++ KD
Sbjct: 126 RVV-AEDLHSDQEEEGGPQVNAKLLVPSDQIGCVLGKGGQIVQNLRSETGAQIRIL-KDD 183
Query: 181 SEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIP 240
P +CA+ D V ISG++ VKKAL I++ ++ R L + V PS
Sbjct: 184 HVP--ACALRSDELVQISGDAAVVKKALHQIASRLHHNPSRTQHLLGSAV----PS---- 233
Query: 241 SDVPIYPPGG--LYPNADPILPSRSVPSILGAARVPDLQGY-ADTGNTWP---VYSTGLS 294
+YP GG + P A P P + A V GY +DTG+ WP +YS
Sbjct: 234 ----VYPSGGSLMGPTAGP-------PIVGMAPLVGPYGGYKSDTGD-WPPRSMYSAPRD 281
Query: 295 LVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECV 354
+ S S+E +R++CP +G VIGKGGG I IRQ SGA I VD + D+C+
Sbjct: 282 EI------SSSKEFSVRLVCPTGNLGGVIGKGGGIINQIRQDSGATIKVDSSAKG-DDCL 334
Query: 355 ITVTAIESPDDIKSMAVEAVLLLQTKINDEDDD-----TVTIRLLVSSKVIGCIIGKSGS 409
IT++ E ++ S VEA +LLQ + +++ + + T RLLVSS IGC+IGK GS
Sbjct: 335 ITISTKEFFEETFSPTVEAAVLLQPRCSEKSERDSGIISFTTRLLVSSSRIGCLIGKGGS 394
Query: 410 IINEIRKRTKADVRI-SKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDR 468
II E+R+ TK+++RI SK + PK A +DE+V++ G++ +DALVQ++ RLR + L DR
Sbjct: 395 IITEMRRLTKSNIRILSKENLPKIASDDDEMVQISGDLDVAKDALVQVLTRLRAN-LFDR 453
Query: 469 DGSRNPPVGADHIYSSGTGISMPPLLPSIP-PV-GP--LGYDQRADSGSGIGM------- 517
+G+ P+LP IP PV GP L Y+ R G G
Sbjct: 454 EGAVP---------------GFLPVLPYIPAPVDGPDVLNYESRDGKRHGRGHSYSSGYG 498
Query: 518 ----LSSSSLYG-YGSLSM-GDSPYGSMSSYS 543
L YG Y S + G S YG SYS
Sbjct: 499 GSSDLGPVDTYGSYASSQLAGGSGYGDYESYS 530
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 105/326 (32%), Positives = 161/326 (49%), Gaps = 52/326 (15%)
Query: 306 EELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITV-------T 358
E+ V R LCP KIG +IG+GG +K +R + A+I + +T DE V+TV
Sbjct: 45 EDTVFRYLCPGRKIGSIIGRGGEIVKQLRVETKAKIRIGETVPGCDERVVTVYSSSDETN 104
Query: 359 AIESPDDIKSMAVEAVLLLQTKINDEDDDT---------VTIRLLVSSKVIGCIIGKSGS 409
++ D + S A +A+ + ++ ED + V +LLV S IGC++GK G
Sbjct: 105 TVDDGDKLVSPAEDALFKIHDRVVAEDLHSDQEEEGGPQVNAKLLVPSDQIGCVLGKGGQ 164
Query: 410 IINEIRKRTKADVRISKGDK-PKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDR 468
I+ +R T A +RI K D P CA +DELV++ G+ V+ AL QI RL + + +
Sbjct: 165 IVQNLRSETGAQIRILKDDHVPACALRSDELVQISGDAAVVKKALHQIASRLHHNPSRTQ 224
Query: 469 D--GSRNPPVGADHIYSSGTGI----SMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSS 522
GS P V Y SG + + PP++ P VGP G ++D+G
Sbjct: 225 HLLGSAVPSV-----YPSGGSLMGPTAGPPIVGMAPLVGPYG-GYKSDTGD--------- 269
Query: 523 LYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKI 582
+ SM +P +SS SK + ++ ++ P +G VIGK G + IR+
Sbjct: 270 ---WPPRSMYSAPRDEISS--SKEF-------SVRLVCPTGNLGGVIGKGGGIINQIRQD 317
Query: 583 SGATIEMSDSKSSRGDRVALISGTPE 608
SGATI++ S++GD + T E
Sbjct: 318 SGATIKV--DSSAKGDDCLITISTKE 341
>gi|225458964|ref|XP_002283591.1| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
vinifera]
Length = 701
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 217/705 (30%), Positives = 343/705 (48%), Gaps = 106/705 (15%)
Query: 1 MGDSGKRYRSQRDNDRDGKNQKRRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVIN 60
+ DS + + Q+ +NQ +I+ +V++R+LCP GSVIGK G +I+
Sbjct: 16 LTDSNGKGKWQKSGGFYSQNQSLKISPG-------TVVFRVLCPASKTGSVIGKGGTIIS 68
Query: 61 SIRQETRARVKVVDPFPGAKDRVVTIYSHVKDK-----------EDVEVDDEFND-KEP- 107
IRQET +V+V + G +RVV I KD ED + +E +D KEP
Sbjct: 69 QIRQETGVKVRVEETVSGCDERVVLITGSDKDTEADNEQSKEDGEDTKAAEEVSDTKEPG 128
Query: 108 -------------------LCAAQDALLKVHAAIANAVA--NATDNDKKRKEKEECQILV 146
+ + Q ALL V +A + N D D + ++LV
Sbjct: 129 ENDEDKESVPVEDSQVEKGISSVQKALLLVFERMAEGESETNGGDEDSNKSPTFVVRLLV 188
Query: 147 PSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKK 206
SSQ ++GK G+ IK++ +++ I++ P+D CA D V I+GE +A K+
Sbjct: 189 LSSQVGCLLGKGGSVIKQMSAESGAQIRILPRDK---LPLCASPSDELVQITGELDACKQ 245
Query: 207 ALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPS 266
AL +IS + + PR D + +T S + P P P + P++ P
Sbjct: 246 ALQSISQQLLENPPR-DYDIVSTNPTGSSSHLF---GPPLPRSEAQPPPNYSFPAQGAPY 301
Query: 267 ILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEE-LVIRVLCPFNKIGRVIGK 325
AA V D +++T + SG+ G + ++ L R+LC ++G +IGK
Sbjct: 302 ---AAGVRDTDYHSNTPQLHKFHE------SGMPGWMKPQDILTFRLLCHDERVGGIIGK 352
Query: 326 GGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTK----I 381
GG IK+++ +G +I V D + ++ VI ++ PDD S A +AVL +Q++ I
Sbjct: 353 GGTIIKNLQNETGCEIKVLDGVPDSEDRVIFISGSAHPDDRISPAQDAVLRVQSRIVRAI 412
Query: 382 NDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDK-PKCADANDELV 440
D + TV RLLVSS IGC++GK G+II E+RK + A +RI D+ PKCA N+E+V
Sbjct: 413 PDSKEKTVIARLLVSSTQIGCLLGKGGAIIAEMRKLSGAHIRILGKDQIPKCASENEEVV 472
Query: 441 EVVGEVGSVRDALVQIILRLRDDALKDRDGSRNP--PVGADHI-----YSSGTGISMPPL 493
++ GE +V++AL+QI RLR +D +P P D + Y + S P +
Sbjct: 473 QINGEFEAVQEALLQITTRLRHHHFRDAFSVNHPSNPAFTDQVPPFPPYLARREFSPPGM 532
Query: 494 LPSIPP----------VGPLG----YDQRADSGSGIGMLS----------SSSLYGYGSL 529
++ P + P G +D RA I L SS+ +G+ L
Sbjct: 533 YSNLGPSFHKFDAVGVLHPHGGFHPHDDRAPFMHSIHRLGIPPHIPERKPSSAPWGHQGL 592
Query: 530 SMGDSPYGSMSSYSSKL------YGG-----LPPPLTLEVLVPANAVGKVIGKAGSNLAN 578
G P G ++ ++ +GG + T+EV+VP + V + G+ G L
Sbjct: 593 IEGGVPIG-LADFAGGPQRRIPGFGGGNQQAIITSTTVEVVVPRSLVPSIYGEDGGCLRQ 651
Query: 579 IRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFIMA 623
IR+IS A I +++ K + V +ISGTPEQ AA++LIQAF+++
Sbjct: 652 IRQISDAKITITEPKPGASETVIIISGTPEQTHAAQSLIQAFVLS 696
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 105/419 (25%), Positives = 179/419 (42%), Gaps = 75/419 (17%)
Query: 12 RDNDRDGKN-QKRRINEKDEKGN---EESVIYRILCPDGVIGSVIGKSGKVINSIRQETR 67
RD D Q + +E G ++ + +R+LC D +G +IGK G +I +++ ET
Sbjct: 306 RDTDYHSNTPQLHKFHESGMPGWMKPQDILTFRLLCHDERVGGIIGKGGTIIKNLQNETG 365
Query: 68 ARVKVVDPFPGAKDRVVTIY--SHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANA 125
+KV+D P ++DRV+ I +H D+ + AQDA+L+V + I A
Sbjct: 366 CEIKVLDGVPDSEDRVIFISGSAHPDDR--------------ISPAQDAVLRVQSRIVRA 411
Query: 126 VANATDNDKKRKEKEE-CQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPT 184
+ ++ KEK ++LV S+Q ++GK GA I +R + I++ KD
Sbjct: 412 IPDS-------KEKTVIARLLVSSTQIGCLLGKGGAIIAEMRKLSGAHIRILGKDQ---I 461
Query: 185 HSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPRE-----------------DIPLE 227
CA E + V I+GE EAV++AL I+ + R+ P
Sbjct: 462 PKCASENEEVVQINGEFEAVQEALLQITTRLRHHHFRDAFSVNHPSNPAFTDQVPPFPPY 521
Query: 228 TTVREAPPSIIIPSDVP----------IYPPGGLYPNAD--PILPS---RSVPSILGAAR 272
RE P + + P ++P GG +P+ D P + S +P + R
Sbjct: 522 LARREFSPPGMYSNLGPSFHKFDAVGVLHPHGGFHPHDDRAPFMHSIHRLGIPPHI-PER 580
Query: 273 VPDLQGYADTGNTWPVYSTGLS--------LVSGLVGASQS---EELVIRVLCPFNKIGR 321
P + G GL+ + G G +Q + V+ P + +
Sbjct: 581 KPSSAPWGHQGLIEGGVPIGLADFAGGPQRRIPGFGGGNQQAIITSTTVEVVVPRSLVPS 640
Query: 322 VIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTK 380
+ G+ GG ++ IRQ S A+I + + K E VI ++ ++A +L +T+
Sbjct: 641 IYGEDGGCLRQIRQISDAKITITEPKPGASETVIIISGTPEQTHAAQSLIQAFVLSETE 699
>gi|293331673|ref|NP_001170496.1| uncharacterized protein LOC100384498 [Zea mays]
gi|238005660|gb|ACR33865.1| unknown [Zea mays]
Length = 239
Score = 229 bits (585), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 124/244 (50%), Positives = 168/244 (68%), Gaps = 13/244 (5%)
Query: 389 VTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGS 448
+ +RLLV +KVIGC+IG+ GSI+N++RK+TKA++ ISKGDKP+ A ++DELVEV GE
Sbjct: 1 MNLRLLVPNKVIGCLIGRGGSIVNDMRKKTKANILISKGDKPRRASSSDELVEVSGEADK 60
Query: 449 VRDALVQIILRLRDDALK--------DRDGSRNPPVGADHIYSSGTGISMPPLLPSIPPV 500
+RDALVQIILRLR+ LK DRDG +D +Y G+ + +P LLP +
Sbjct: 61 LRDALVQIILRLREAVLKESVESQNSDRDGQLT-VAASDSLY--GSSLPLPALLPHNQQI 117
Query: 501 GPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLV 560
PLGYD+R + + + +S YGY S+ + D YG + SY+SK Y P LE+ V
Sbjct: 118 APLGYDRRGEPERALEVFPRTSSYGYSSMQVTDDGYGGLPSYASKAYEEHVP--RLEMTV 175
Query: 561 PANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAF 620
PA+ + KV+GK G+NL NIRKISGA IE+ + KSSR + +A ISGT EQ+ +AENLI+AF
Sbjct: 176 PASGISKVMGKHGTNLDNIRKISGAHIEIIEPKSSRHEHIAYISGTSEQRHSAENLIKAF 235
Query: 621 IMAT 624
IM+T
Sbjct: 236 IMST 239
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 108/232 (46%), Gaps = 30/232 (12%)
Query: 142 CQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGES 201
++LVP+ +IG+ G+ + +R KT+ +I ++ D S D V +SGE+
Sbjct: 3 LRLLVPNKVIGCLIGRGGSIVNDMRKKTKANILISKGDKPRRASSS----DELVEVSGEA 58
Query: 202 EAVKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIY----PPGGLYPNADP 257
+ ++ AL I + + +E + + + R+ + + + +Y P L P+
Sbjct: 59 DKLRDALVQIILRLREAVLKESVESQNSDRDG--QLTVAASDSLYGSSLPLPALLPHNQQ 116
Query: 258 ILPSRSVPSILGAARVPD----LQGYADTGNTWPVYSTGLSLVSGLVG----ASQS-EEL 308
I P LG R + L+ + T + YS+ G G AS++ EE
Sbjct: 117 IAP-------LGYDRRGEPERALEVFPRTSSYG--YSSMQVTDDGYGGLPSYASKAYEEH 167
Query: 309 VIRV--LCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
V R+ P + I +V+GK G + +IR+ SGA I++ + K +R E + ++
Sbjct: 168 VPRLEMTVPASGISKVMGKHGTNLDNIRKISGAHIEIIEPKSSRHEHIAYIS 219
>gi|449527609|ref|XP_004170802.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 546
Score = 229 bits (585), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 177/540 (32%), Positives = 279/540 (51%), Gaps = 75/540 (13%)
Query: 5 GKRYRSQRDNDRDGKNQKRRINEKDEKG--NEESVIYRILCPDGVIGSVIGKSGKVINSI 62
GKR SQ D +G N++R E ++ + E +YR LCP IGSVIG+ G+++ +
Sbjct: 9 GKRNHSQSDYSENGGNKRRSHGEDRDQFVIDSEDTVYRYLCPVKKIGSVIGRGGEIVKQL 68
Query: 63 RQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAI 122
R +T++++++ + PG+ +RV+TIYS + +E ++ + AQ+AL K+H +
Sbjct: 69 RIDTKSKIRIGETVPGSDERVITIYSASNETNSLEESSDY-----VSPAQEALFKIHDRV 123
Query: 123 ANAVANATDNDKKRKEKE-ECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+ D D + + ++LVPS Q IIGK G ++ +R++T +++ KD
Sbjct: 124 V--ADDYMDEDSEGGGHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGAQVRIL-KDDH 180
Query: 182 EPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPS 241
P CA+ D V ISGE VKKAL+ I++ ++ R ++ S
Sbjct: 181 LPR--CALSSDELVQISGEPLIVKKALYQIASRLHDNPSRS-------------QHLLAS 225
Query: 242 DVP-IYPPGGLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLV 300
+P +Y GG + P+ P I+G A P + Y G P LS
Sbjct: 226 AIPGVYSSGG-----SLMAPTHGAP-IMGLA--PLVSPYG--GYKAP--REDLS------ 267
Query: 301 GASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAI 360
S+E +R++CP IG VIGKGG I IRQ + A I VD + D+C+I +++
Sbjct: 268 ----SKEFSLRLICPTENIGGVIGKGGAIINQIRQETKAAIKVDSSATEGDDCLINISSK 323
Query: 361 ESPDDIKSMAVEAVLLLQTKIND--EDDD---TVTIRLLVSSKVIGCIIGKSGSIINEIR 415
E +D S +EA L LQ + ++ E D + T RLLV + IGC+IGK G+II E+R
Sbjct: 324 EFFEDSYSPTLEAALRLQPRCSEKVERDSGIISFTTRLLVPTSRIGCLIGKGGAIITELR 383
Query: 416 KRTKADVRI-SKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNP 474
+ TKA++RI SK + PK A +DE+V++ G++ ++ALV I+ RLR + L DR+G+ +
Sbjct: 384 RLTKANIRILSKENLPKVALEDDEMVQISGDLDVAKEALVHIVTRLRAN-LFDREGALS- 441
Query: 475 PVGADHIYSSGTGISMPPLLPSIPPVG----PLGYDQRADSGSGIGMLSSSSLYGYGSLS 530
++ P+LP +P L YD R G G SS G+ L+
Sbjct: 442 --------------AVLPVLPYLPLSADGSDSLSYDGREGKRHGRGHSYSSGYGGFNDLA 487
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 110/318 (34%), Positives = 154/318 (48%), Gaps = 67/318 (21%)
Query: 305 SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITV------- 357
SE+ V R LCP KIG VIG+GG +K +R + ++I + +T DE VIT+
Sbjct: 40 SEDTVYRYLCPVKKIGSVIGRGGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNET 99
Query: 358 TAIESPDDIKSMAVEAVLLLQTKI-----NDEDDD----TVTIRLLVSSKVIGCIIGKSG 408
++E D S A EA+ + ++ DED + VT RLLV S IGCIIGK G
Sbjct: 100 NSLEESSDYVSPAQEALFKIHDRVVADDYMDEDSEGGGHQVTARLLVPSDQIGCIIGKGG 159
Query: 409 SIINEIRKRTKADVRISKGDK-PKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKD 467
I+ IR T A VRI K D P+CA ++DELV++ GE V+ AL QI RL D+
Sbjct: 160 QIVQNIRTETGAQVRILKDDHLPRCALSSDELVQISGEPLIVKKALYQIASRLHDNP--- 216
Query: 468 RDGSRNPPVGADHI---YSSGTGISMP----PLLPSIPPVGPLGYDQRADSGSGIGMLSS 520
SR+ + A I YSSG + P P++ P V P G
Sbjct: 217 ---SRSQHLLASAIPGVYSSGGSLMAPTHGAPIMGLAPLVSPYG---------------- 257
Query: 521 SSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIR 580
GY +P +SS +L ++ P +G VIGK G+ + IR
Sbjct: 258 ----GY------KAPREDLSS----------KEFSLRLICPTENIGGVIGKGGAIINQIR 297
Query: 581 KISGATIEMSDSKSSRGD 598
+ + A I++ DS ++ GD
Sbjct: 298 QETKAAIKV-DSSATEGD 314
>gi|449447377|ref|XP_004141445.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 545
Score = 229 bits (585), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 177/540 (32%), Positives = 279/540 (51%), Gaps = 75/540 (13%)
Query: 5 GKRYRSQRDNDRDGKNQKRRINEKDEKG--NEESVIYRILCPDGVIGSVIGKSGKVINSI 62
GKR SQ D +G N++R E ++ + E +YR LCP IGSVIG+ G+++ +
Sbjct: 9 GKRNHSQSDYSENGGNKRRSHGEDRDQFVIDSEDTVYRYLCPVKKIGSVIGRGGEIVKQL 68
Query: 63 RQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAI 122
R +T++++++ + PG+ +RV+TIYS + +E ++ + AQ+AL K+H +
Sbjct: 69 RIDTKSKIRIGETVPGSDERVITIYSASNETNSLEESSDY-----VSPAQEALFKIHDRV 123
Query: 123 ANAVANATDNDKKRKEKE-ECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+ D D + + ++LVPS Q IIGK G ++ +R++T +++ KD
Sbjct: 124 V--ADDYMDEDSEGGGHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGAQVRIL-KDDH 180
Query: 182 EPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPS 241
P CA+ D V ISGE VKKAL+ I++ ++ R ++ S
Sbjct: 181 LPR--CALSSDELVQISGEPLIVKKALYQIASRLHDNPSRS-------------QHLLAS 225
Query: 242 DVP-IYPPGGLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLV 300
+P +Y GG + P+ P I+G A P + Y G P LS
Sbjct: 226 AIPGVYSSGG-----SLMAPTHGAP-IMGLA--PLVSPYG--GYKAP--REDLS------ 267
Query: 301 GASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAI 360
S+E +R++CP IG VIGKGG I IRQ + A I VD + D+C+I +++
Sbjct: 268 ----SKEFSLRLICPTENIGGVIGKGGAIINQIRQETKAAIKVDSSATEGDDCLINISSK 323
Query: 361 ESPDDIKSMAVEAVLLLQTKIND--EDDD---TVTIRLLVSSKVIGCIIGKSGSIINEIR 415
E +D S +EA L LQ + ++ E D + T RLLV + IGC+IGK G+II E+R
Sbjct: 324 EFFEDSYSPTLEAALRLQPRCSEKVERDSGIISFTTRLLVPTSRIGCLIGKGGAIITELR 383
Query: 416 KRTKADVRI-SKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNP 474
+ TKA++RI SK + PK A +DE+V++ G++ ++ALV I+ RLR + L DR+G+ +
Sbjct: 384 RLTKANIRILSKENLPKVALEDDEMVQISGDLDVAKEALVHIVTRLRAN-LFDREGALS- 441
Query: 475 PVGADHIYSSGTGISMPPLLPSIPPVG----PLGYDQRADSGSGIGMLSSSSLYGYGSLS 530
++ P+LP +P L YD R G G SS G+ L+
Sbjct: 442 --------------AVLPVLPYLPLSADGSDSLSYDGREGKRHGRGHSYSSGYGGFNDLA 487
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 110/318 (34%), Positives = 154/318 (48%), Gaps = 67/318 (21%)
Query: 305 SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITV------- 357
SE+ V R LCP KIG VIG+GG +K +R + ++I + +T DE VIT+
Sbjct: 40 SEDTVYRYLCPVKKIGSVIGRGGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNET 99
Query: 358 TAIESPDDIKSMAVEAVLLLQTKI-----NDEDDD----TVTIRLLVSSKVIGCIIGKSG 408
++E D S A EA+ + ++ DED + VT RLLV S IGCIIGK G
Sbjct: 100 NSLEESSDYVSPAQEALFKIHDRVVADDYMDEDSEGGGHQVTARLLVPSDQIGCIIGKGG 159
Query: 409 SIINEIRKRTKADVRISKGDK-PKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKD 467
I+ IR T A VRI K D P+CA ++DELV++ GE V+ AL QI RL D+
Sbjct: 160 QIVQNIRTETGAQVRILKDDHLPRCALSSDELVQISGEPLIVKKALYQIASRLHDNP--- 216
Query: 468 RDGSRNPPVGADHI---YSSGTGISMP----PLLPSIPPVGPLGYDQRADSGSGIGMLSS 520
SR+ + A I YSSG + P P++ P V P G
Sbjct: 217 ---SRSQHLLASAIPGVYSSGGSLMAPTHGAPIMGLAPLVSPYG---------------- 257
Query: 521 SSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIR 580
GY +P +SS +L ++ P +G VIGK G+ + IR
Sbjct: 258 ----GY------KAPREDLSS----------KEFSLRLICPTENIGGVIGKGGAIINQIR 297
Query: 581 KISGATIEMSDSKSSRGD 598
+ + A I++ DS ++ GD
Sbjct: 298 QETKAAIKV-DSSATEGD 314
>gi|413933963|gb|AFW68514.1| hypothetical protein ZEAMMB73_983755 [Zea mays]
Length = 464
Score = 228 bits (581), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 163/493 (33%), Positives = 255/493 (51%), Gaps = 58/493 (11%)
Query: 3 DSGKRYRSQRDNDRDGKNQKRRINEKDEKGNEESV--IYRILCPDGVIGSVIGKSGKVIN 60
+S KR S D DGK ++ D + E + IYRILCP IGSV+G+ G ++
Sbjct: 10 NSKKRRHSNSD---DGKRKRLSSRHDDTSMSSEPIETIYRILCPAKKIGSVLGRGGDIVK 66
Query: 61 SIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKE------DVEVDDEFNDKEPLCAAQDA 114
++R+ET+A+++V D PGA +RV+ I+++ E + ++ D + +P C AQDA
Sbjct: 67 ALREETKAKIRVADSIPGADERVIIIFNYQNQPELTDEAAEKQISDGLGNMKPHCFAQDA 126
Query: 115 LLKVHAAI-ANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSI 173
LLK+H I A+ + + +D+ + +ILV +Q ++GK G+ I++LRS T I
Sbjct: 127 LLKIHDKIVADEIYDEVAHDES-SDDVTARILVQGNQVGCLLGKGGSIIQQLRSDTGAGI 185
Query: 174 KVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLE------ 227
+V +SE CA++ D V ISG V+KAL+ IS +++ +E+ PLE
Sbjct: 186 RVL---SSENLPQCALQSDELVQISGAPSLVRKALYEISTRLHQHPRKENRPLEQIIDAS 242
Query: 228 TTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTWP 287
T + P++ + + + P + P RS P +P
Sbjct: 243 TQRKHESPTLQHENPMLPHLHSHHPPPIPLLDPYRSGPQ-------------------YP 283
Query: 288 VYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDT- 346
V S++EE IR+LC IG VIGK G ++ + Q +GA+I V +
Sbjct: 284 V--------------SETEEFSIRILCASELIGSVIGKSGANVRRVEQQTGARIKVQEID 329
Query: 347 KDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKIN-DEDDDTVTIRLLVSSKVIGCIIG 405
KD E +I V++ E P + S +EA++LL K++ + + RL+V S +GCI+G
Sbjct: 330 KDASGERLIIVSSNEIPTEPISPTIEALILLHDKVSASSEKHHSSTRLVVPSNKVGCILG 389
Query: 406 KSGSIINEIRKRTKADVRI-SKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDA 464
+ G +I E+R+RT A++R+ SK DKPK DELV+V G R AL +I RLR
Sbjct: 390 EGGQVITEMRRRTGAEIRVYSKADKPKYLSFGDELVQVAGPPAIARGALTEIASRLRTRT 449
Query: 465 LKDRDGSRNPPVG 477
L+D N G
Sbjct: 450 LRDTSCWTNSWTG 462
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 95/346 (27%), Positives = 158/346 (45%), Gaps = 58/346 (16%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
E + R+LCP KIG V+G+GG +K++R+ + A+I V D+ DE VI + ++ ++
Sbjct: 42 ETIYRILCPAKKIGSVLGRGGDIVKALREETKAKIRVADSIPGADERVIIIFNYQNQPEL 101
Query: 367 KSMAVE------------------AVLLLQTKI----------NDEDDDTVTIRLLVSSK 398
A E A+L + KI +DE D VT R+LV
Sbjct: 102 TDEAAEKQISDGLGNMKPHCFAQDALLKIHDKIVADEIYDEVAHDESSDDVTARILVQGN 161
Query: 399 VIGCIIGKSGSIINEIRKRTKADVRI-SKGDKPKCADANDELVEVVGEVGSVRDALVQII 457
+GC++GK GSII ++R T A +R+ S + P+CA +DELV++ G VR AL +I
Sbjct: 162 QVGCLLGKGGSIIQQLRSDTGAGIRVLSSENLPQCALQSDELVQISGAPSLVRKALYEIS 221
Query: 458 LRLRDDALKDRDGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGM 517
RL K+ N P+ + I + T P++ P+ + I +
Sbjct: 222 TRLHQHPRKE-----NRPL--EQIIDASTQRKHES--PTLQHENPMLPHLHSHHPPPIPL 272
Query: 518 LSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLA 577
L PY S Y ++ +L + +G VIGK+G+N+
Sbjct: 273 LD---------------PYRSGPQYPV----SETEEFSIRILCASELIGSVIGKSGANVR 313
Query: 578 NIRKISGATIEMSD-SKSSRGDRVALISGTPEQKRAAENLIQAFIM 622
+ + +GA I++ + K + G+R+ ++S I+A I+
Sbjct: 314 RVEQQTGARIKVQEIDKDASGERLIIVSSNEIPTEPISPTIEALIL 359
>gi|357466759|ref|XP_003603664.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355492712|gb|AES73915.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 662
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 196/667 (29%), Positives = 315/667 (47%), Gaps = 119/667 (17%)
Query: 36 SVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIY-------- 87
SV++R+LCP IG VIGK G +I+ IR ET +VK+ +P PG ++RV+T
Sbjct: 31 SVVFRLLCPASKIGGVIGKGGSIISQIRHETGVKVKIEEPVPGCEERVITFLKESEEGSA 90
Query: 88 -------------SHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHA---------AIANA 125
S VKD E+ D+ DK+ + KV++ +
Sbjct: 91 EQGKEVNDNDESESKVKDDEEKGNGDDNEDKDSVSVEDSQSEKVNSNPTIMRAVMLVFER 150
Query: 126 VANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTH 185
VA D+ +K ++L+ S+Q I+GK G+ IKR+ +++ I++ PK E
Sbjct: 151 VAEDEGGDESKKGYFGLRLLILSNQVGCILGKGGSVIKRMSAESGAQIRILPK---EEIP 207
Query: 186 SCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVR--------EAPPS- 236
+CA + D V I+G E V++AL ++ + + SPR+ L T + + PP+
Sbjct: 208 ACASDSDELVQITGGVEVVRRALQSVFQQLVENSPRDHESLPTNLTGPSSHSYGQFPPNK 267
Query: 237 ----------IIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTW 286
P+++P++ ++ P++P +ILG R P
Sbjct: 268 RTFAGQGASFATGPNEIPVF-------HSAPMIPKFHEGAILGRMRPP------------ 308
Query: 287 PVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDT 346
E L R+LCP +G +IGKGG IK ++Q + ++I V +
Sbjct: 309 ------------------PEILTFRLLCPSESVGNLIGKGGSIIKMLQQETASEIKVIEA 350
Query: 347 KDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKIN----DEDDDTVTIRLLVSSKVIGC 402
++C+I ++ PDD S EA+ +Q +I+ D + ++ R++VSSK IGC
Sbjct: 351 IPGSEDCIIIISGPAHPDDRISPVQEAIFRVQNRISRAMLDSKEHSMLARVIVSSKHIGC 410
Query: 403 IIGKSGSIINEIRKRTKADVRISKGDK-PKCADANDELVEVVGEVGSVRDALVQIILRLR 461
++GK GSII E+R + A +R+ DK PKC +DE+++V G + +V DAL+QI RLR
Sbjct: 411 LLGKGGSIIAEMRNLSGAHIRMLGKDKGPKCVSEDDEVIQVSGVIEAVHDALLQITTRLR 470
Query: 462 DDALKDRDGSRNPPVGADHI--------YSSGTGISMPPLLPSIPPVGPLGYDQRADSG- 512
++ +D S N P + + Y G+S P + + P P D
Sbjct: 471 NNFFRDAFPSANFPSNSAFLDQHSPFPPYLGRRGLSPPGMYSDLGPRHPHADFPLDDHPP 530
Query: 513 -------SGI-GMLSSSSLYG-----YGSLSMGDSPYGSMSSYSSKLYGGLPPPL---TL 556
SGI ++S +G G MG + S GG P + T+
Sbjct: 531 FMNNMYRSGIPPLISERKPWGPKGILEGGGHMGLPEFAGGPRRISGFAGGSQPIITSTTV 590
Query: 557 EVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENL 616
EV+VP V ++ G+ G L I +IS A + ++D + +ISGTPEQ AA++L
Sbjct: 591 EVVVPRALVAEIYGENGECLKQILQISDANVIITDPIPGAVETKIIISGTPEQTNAAQSL 650
Query: 617 IQAFIMA 623
IQAF+M+
Sbjct: 651 IQAFVMS 657
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 88/380 (23%), Positives = 162/380 (42%), Gaps = 71/380 (18%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIY--SHVKD 92
E + +R+LCP +G++IGK G +I ++QET + +KV++ PG++D ++ I +H D
Sbjct: 310 EILTFRLLCPSESVGNLIGKGGSIIKMLQQETASEIKVIEAIPGSEDCIIIISGPAHPDD 369
Query: 93 KEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSA 152
+ + Q+A+ +V I+ A+ ++ ++ +++V S
Sbjct: 370 R--------------ISPVQEAIFRVQNRISRAMLDSKEHSML------ARVIVSSKHIG 409
Query: 153 NIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAIS 212
++GK G+ I +R+ + I++ KD C E D + +SG EAV AL I+
Sbjct: 410 CLLGKGGSIIAEMRNLSGAHIRMLGKDKGP---KCVSEDDEVIQVSGVIEAVHDALLQIT 466
Query: 213 AIMYKFSPREDIPLETTVREAPPSIIIPSD---------VPIY-------PPGGL----- 251
+ R+A PS PS+ P Y PPG
Sbjct: 467 TRLRN----------NFFRDAFPSANFPSNSAFLDQHSPFPPYLGRRGLSPPGMYSDLGP 516
Query: 252 -YPNAD-------PILPS--RS-VPSILGAARVPDLQGYADTGNTW--PVYSTGLSLVSG 298
+P+AD P + + RS +P ++ + +G + G P ++ G +SG
Sbjct: 517 RHPHADFPLDDHPPFMNNMYRSGIPPLISERKPWGPKGILEGGGHMGLPEFAGGPRRISG 576
Query: 299 LVGASQS--EELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVIT 356
G SQ + V+ P + + G+ G +K I Q S A + + D E I
Sbjct: 577 FAGGSQPIITSTTVEVVVPRALVAEIYGENGECLKQILQISDANVIITDPIPGAVETKII 636
Query: 357 VTAIESPDDIKSMAVEAVLL 376
++ + ++A ++
Sbjct: 637 ISGTPEQTNAAQSLIQAFVM 656
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 97/359 (27%), Positives = 159/359 (44%), Gaps = 82/359 (22%)
Query: 305 SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAI---- 360
S +V R+LCP +KIG VIGKGG I IR +G ++ +++ +E VIT
Sbjct: 29 SSSVVFRLLCPASKIGGVIGKGGSIISQIRHETGVKVKIEEPVPGCEERVITFLKESEEG 88
Query: 361 ------------ESPDDIK---------------SMAVE---------------AVLLLQ 378
ES +K S++VE AV+L+
Sbjct: 89 SAEQGKEVNDNDESESKVKDDEEKGNGDDNEDKDSVSVEDSQSEKVNSNPTIMRAVMLVF 148
Query: 379 TKI-NDEDDDT-----VTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRI-SKGDKPK 431
++ DE D +RLL+ S +GCI+GK GS+I + + A +RI K + P
Sbjct: 149 ERVAEDEGGDESKKGYFGLRLLILSNQVGCILGKGGSVIKRMSAESGAQIRILPKEEIPA 208
Query: 432 CADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSGTGISMP 491
CA +DELV++ G V VR AL + +L +++ +D + S+P
Sbjct: 209 CASDSDELVQITGGVEVVRRALQSVFQQLVENSPRDHE-------------------SLP 249
Query: 492 PLL--PSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGG 549
L PS G ++R +G G +S G + + S + + G
Sbjct: 250 TNLTGPSSHSYGQFPPNKRTFAGQG-----ASFATGPNEIPVFHSAPMIPKFHEGAILGR 304
Query: 550 LPPP---LTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISG 605
+ PP LT +L P+ +VG +IGK GS + +++ + + I++ ++ D + +ISG
Sbjct: 305 MRPPPEILTFRLLCPSESVGNLIGKGGSIIKMLQQETASEIKVIEAIPGSEDCIIIISG 363
>gi|414870926|tpg|DAA49483.1| TPA: hypothetical protein ZEAMMB73_398324 [Zea mays]
Length = 541
Score = 224 bits (572), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 156/470 (33%), Positives = 253/470 (53%), Gaps = 61/470 (12%)
Query: 3 DSGKRYRSQRDNDRDGKNQKRRINEKDEKGNEESV--IYRILCPDGVIGSVIGKSGKVIN 60
+S KR S D DGK ++ D E + IYRILCP IGSV+G+ G ++
Sbjct: 10 NSKKRTHSNSD---DGKRKRLNTRHDDTSMFSEPIETIYRILCPVKKIGSVLGRGGDIVK 66
Query: 61 SIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPL------CAAQDA 114
++R+ET+A+++V D PGA +RV+ I+++ + E + E + + L C AQDA
Sbjct: 67 ALREETKAKIRVADSIPGADERVIIIFNYQNEPEPTDEAAEEKNSDGLGNFKSHCFAQDA 126
Query: 115 LLKVHAAI-ANAVANATDNDKKRKEKEE--CQILVPSSQSANIIGKAGATIKRLRSKTRT 171
LLK+H I ++ + + ND+K + ++ +ILV +Q ++GK G+ I++LRS T
Sbjct: 127 LLKIHDKIVSDEIHDEVANDEKSESADDVTARILVQGNQVGCLLGKGGSIIQQLRSNTGA 186
Query: 172 SIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTV- 230
I+V P SE CA++ D V ISG V+KAL+ IS +++ +E+ PLE +
Sbjct: 187 GIRVLP---SENLPQCALKSDELVQISGAPSLVRKALYEISTRLHQHPRKENRPLEEIID 243
Query: 231 ------REAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQGYADTGN 284
RE+P + + + P L+ + P +P +L R +G
Sbjct: 244 ASTQRKRESP---TLQHEYSMLP--HLHSDHTPPIP------LLDPYR---------SGP 283
Query: 285 TWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVD 344
+PV +++EE IR+LC IG VIGK G ++ + Q +GA+I V
Sbjct: 284 QYPV--------------TETEEFSIRILCASELIGSVIGKSGANVRRVEQQTGARIKVQ 329
Query: 345 DT-KDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKIND-EDDDTVTIRLLVSSKVIGC 402
+ KD E +I +++ E P + S A+EA++LL K++ + + RL+V S +GC
Sbjct: 330 EIDKDASGERLIIISSNEIPAEPISPAIEALILLHDKVSAPSEKHHSSTRLVVPSSKVGC 389
Query: 403 IIGKSGSIINEIRKRTKADVRI-SKGDKPKCADANDELVEVVGEVGSVRD 451
IIG+ G +I ++R+RT A++R+ SK DKPK +DELV+ G++ D
Sbjct: 390 IIGEGGKVITDMRRRTGAEIRVYSKADKPKYLSFDDELVQAAGQIHGRED 439
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 105/362 (29%), Positives = 158/362 (43%), Gaps = 87/362 (24%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIES---P 363
E + R+LCP KIG V+G+GG +K++R+ + A+I V D+ DE VI + ++ P
Sbjct: 42 ETIYRILCPVKKIGSVLGRGGDIVKALREETKAKIRVADSIPGADERVIIIFNYQNEPEP 101
Query: 364 DD-------------IKS--MAVEAVLLLQTKI----------NDEDD---DTVTIRLLV 395
D KS A +A+L + KI NDE D VT R+LV
Sbjct: 102 TDEAAEEKNSDGLGNFKSHCFAQDALLKIHDKIVSDEIHDEVANDEKSESADDVTARILV 161
Query: 396 SSKVIGCIIGKSGSIINEIRKRTKADVRISKGDK-PKCADANDELVEVVGEVGSVRDALV 454
+GC++GK GSII ++R T A +R+ + P+CA +DELV++ G VR AL
Sbjct: 162 QGNQVGCLLGKGGSIIQQLRSNTGAGIRVLPSENLPQCALKSDELVQISGAPSLVRKALY 221
Query: 455 QIILRLRDDALKDR-------DGS----RNPPVGADHIYSSGTGISMPPLLPS--IPPVG 501
+I RL K+ D S R P H Y SM P L S PP+
Sbjct: 222 EISTRLHQHPRKENRPLEEIIDASTQRKRESPT-LQHEY------SMLPHLHSDHTPPIP 274
Query: 502 PLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVP 561
L PY S Y ++ +L
Sbjct: 275 LL------------------------------DPYRSGPQYPVT----ETEEFSIRILCA 300
Query: 562 ANAVGKVIGKAGSNLANIRKISGATIEMSD-SKSSRGDRVALISGTPEQKRAAENLIQAF 620
+ +G VIGK+G+N+ + + +GA I++ + K + G+R+ +IS I+A
Sbjct: 301 SELIGSVIGKSGANVRRVEQQTGARIKVQEIDKDASGERLIIISSNEIPAEPISPAIEAL 360
Query: 621 IM 622
I+
Sbjct: 361 IL 362
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 124/256 (48%), Gaps = 38/256 (14%)
Query: 385 DDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVG 444
+ + +IR+L +S++IG +IGKSG+ + + ++T A +++ + DK DA+ E + ++
Sbjct: 289 ETEEFSIRILCASELIGSVIGKSGANVRRVEQQTGARIKVQEIDK----DASGERLIIIS 344
Query: 445 E----VGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSGTGISMPP--LLPSIP 498
+ A+ +IL L D+ + P H S T + +P + I
Sbjct: 345 SNEIPAEPISPAIEALIL------LHDKVSA---PSEKHH---SSTRLVVPSSKVGCIIG 392
Query: 499 PVGPLGYDQRADSGSGIGMLSSSSLYGYGSLS----------MGDSPYGSMSSYSSKLYG 548
G + D R +G+ I + S + Y S G Y +S + +
Sbjct: 393 EGGKVITDMRRRTGAEIRVYSKADKPKYLSFDDELVQAAGQIHGREDYREPTSATGRFLS 452
Query: 549 GLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPE 608
T+E+ +P +++G ++G G NLA IR++SGA + + ++ + + V I GT +
Sbjct: 453 ------TIELRIPNSSLGSIVGAGGVNLAEIRQVSGARLRLHEAHAGSSESVVEIQGTLD 506
Query: 609 QKRAAENLIQAFIMAT 624
Q +AA++L+Q FI A
Sbjct: 507 QAKAAQSLLQGFISAN 522
>gi|356568682|ref|XP_003552539.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 543
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 176/515 (34%), Positives = 256/515 (49%), Gaps = 61/515 (11%)
Query: 5 GKRYRSQRDNDRDGKNQKRRINEKDEKGN---EESVIYRILCPDGVIGSVIGKSGKVINS 61
GKR S D+D KN++R D + + ++R LCP IGSVIG+ G ++
Sbjct: 9 GKRSHSHSDSDAGSKNKRRNPAADDSSSSLITADDTVFRYLCPVRKIGSVIGRGGDIVKQ 68
Query: 62 IRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAA 121
+R +T+A++++ D PG +RVVTI+S E+ DE D + AQDAL +VH
Sbjct: 69 LRADTKAKIRIGDALPGCDERVVTIHS---SSEETNHFDETGDL--VSPAQDALFRVHQR 123
Query: 122 IANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+ A + + ++LVPS Q +IGK G ++ +RS+T I++ D
Sbjct: 124 VIAEDAREDE--DDERNHVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDDRL 181
Query: 182 EPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPS 241
P CA+ D V ISGE+ VKKALF I+A + R L + V + +
Sbjct: 182 PP---CALSNDELVQISGEAAVVKKALFQIAAQIRDNPSRSQHLLASAVPGGYAAGGPGA 238
Query: 242 DVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQGY-ADTGNTWPVYSTGLSLVSGLV 300
PI G+ P +GA GY DTG+ W SL
Sbjct: 239 GAPIM---GVAP-------------FVGA-----YGGYKGDTGD-WS-----RSLYPAPR 271
Query: 301 GASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAI 360
+ E +R +CP IG VIGKGG I IRQ SGA I VD + D+C+I ++
Sbjct: 272 DEASMREFSVRFVCPTGNIGGVIGKGGAIINQIRQDSGATIKVDSSATEGDDCLIIISMK 331
Query: 361 ESPDDIKSMAVEAVLLLQTKIND--EDDD---TVTIRLLVSSKVIGCIIGKSGSIINEIR 415
E +D S +EA + LQ + ++ E D + T RLLV + IGC+IGK G+I+ E+R
Sbjct: 332 EFFEDSFSPTIEAAVRLQPRCSEKVERDSGIVSFTTRLLVPTSRIGCLIGKGGTIVTEMR 391
Query: 416 KRTKADVRI-SKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDAL-KDRDGSRN 473
+ TKA++RI SK + PK A +DE+V++ G++ +DALVQ + RLR + K+R S
Sbjct: 392 RLTKANIRILSKENLPKIASEDDEMVQISGDLDVAKDALVQALTRLRANLFDKERAVSGF 451
Query: 474 PPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQR 508
PV +P L S+ L YD R
Sbjct: 452 LPV-------------LPYLPASVDGSDGLNYDSR 473
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 100/331 (30%), Positives = 152/331 (45%), Gaps = 76/331 (22%)
Query: 305 SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTA----- 359
+++ V R LCP KIG VIG+GG +K +R + A+I + D DE V+T+ +
Sbjct: 41 ADDTVFRYLCPVRKIGSVIGRGGDIVKQLRADTKAKIRIGDALPGCDERVVTIHSSSEET 100
Query: 360 --IESPDDIKSMAVEAVLLLQTKI--------NDEDDDTVTIRLLVSSKVIGCIIGKSGS 409
+ D+ S A +A+ + ++ D++ + VT +LLV S IGC+IGK G
Sbjct: 101 NHFDETGDLVSPAQDALFRVHQRVIAEDAREDEDDERNHVTAKLLVPSDQIGCVIGKGGQ 160
Query: 410 IINEIRKRTKADVRISKGDK-PKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDR 468
I+ IR T A +RI K D+ P CA +NDELV++ GE V+ AL QI ++RD+
Sbjct: 161 IVQNIRSETGAQIRILKDDRLPPCALSNDELVQISGEAAVVKKALFQIAAQIRDN----- 215
Query: 469 DGSRNPPVGADHIYSSGTGISMPP--------LLPSIPPVGPLGYDQRADSGSGIGMLSS 520
P + H+ +S ++ P VG G
Sbjct: 216 ------PSRSQHLLASAVPGGYAAGGPGAGAPIMGVAPFVGAYG---------------- 253
Query: 521 SSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPP--------LTLEVLVPANAVGKVIGKA 572
GY G +S LY P P ++ + P +G VIGK
Sbjct: 254 ----GY---------KGDTGDWSRSLY---PAPRDEASMREFSVRFVCPTGNIGGVIGKG 297
Query: 573 GSNLANIRKISGATIEMSDSKSSRGDRVALI 603
G+ + IR+ SGATI++ DS ++ GD +I
Sbjct: 298 GAIINQIRQDSGATIKV-DSSATEGDDCLII 327
>gi|225452863|ref|XP_002283766.1| PREDICTED: KH domain-containing protein At4g18375 [Vitis vinifera]
gi|296082939|emb|CBI22240.3| unnamed protein product [Vitis vinifera]
Length = 548
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 178/527 (33%), Positives = 271/527 (51%), Gaps = 65/527 (12%)
Query: 5 GKRYRSQRDNDRDGKNQKRRINEKDEKG----NEESVIYRILCPDGVIGSVIGKSGKVIN 60
GKR SQ D +G N++R N D++ E +YR LCP IGS+IG+ G+++
Sbjct: 9 GKRAHSQSDYGDNGGNKRR--NPGDDRDPFTIEPEDTVYRYLCPGRKIGSIIGRGGEIVK 66
Query: 61 SIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHA 120
+R +T++++++ + PG ++RVVTIYS + + D F + AQDAL +VH
Sbjct: 67 QLRVDTKSKIRIGETVPGCEERVVTIYSSSDETNAFDDSDTF-----VSPAQDALFRVHD 121
Query: 121 AIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDA 180
+ + + D+++ + ++LVPS Q +IGK G I+ +RS++ +++ KD
Sbjct: 122 RVVSEEVHGEDSEE--ASQVTVRLLVPSDQIGCVIGKGGQIIQSIRSESGAQVRIL-KDD 178
Query: 181 SEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIP 240
P SCA+ D V ISGE V+KAL+ I++ ++ R L + V
Sbjct: 179 HLP--SCALSSDELVQISGEPSLVRKALYQIASRLHDNPSRSQHLLASAV---------- 226
Query: 241 SDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLV 300
P G + P+ P + A V GY W SL S
Sbjct: 227 -------PTGYSSGGSLMGPTSGAPIMGLAPLVGTYGGYRGDSGDW-----SRSLYSAPR 274
Query: 301 GASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNR-DECVITVTA 359
+ S+E +R++CP IG VIGKGG I IRQ SGA I VD T D+C+I ++A
Sbjct: 275 DEASSKEFSLRLVCPIGNIGGVIGKGGVIINQIRQESGAAIKVDSTSAAEADDCLIAISA 334
Query: 360 IESPDDIKSMAVEAVLLLQTKIND--EDDD---TVTIRLLVSSKVIGCIIGKSGSIINEI 414
E +D S +EA + LQ + ++ E D + T RLLV + IGC+IGK G+II E+
Sbjct: 335 KEFFEDTFSPTIEAAVRLQPRCSEKVERDSGIVSFTTRLLVPTSRIGCLIGKGGAIITEM 394
Query: 415 RKRTKADVRI-SKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRN 473
RK TKA++RI SK + PK A +DE+V++ G++ +DAL+Q+ RLR + L DR+G+ +
Sbjct: 395 RKLTKANIRILSKENLPKVASEDDEMVQIAGDLDVAKDALIQVTTRLRAN-LFDREGAVS 453
Query: 474 PPVGADHIYSSGTGISMPPLLPSIPPVGP----LGYDQRADSGSGIG 516
V P+LP +P L YD R + G G
Sbjct: 454 AFV---------------PVLPYLPMAADGSDGLKYDGRDNKRHGRG 485
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 105/316 (33%), Positives = 152/316 (48%), Gaps = 53/316 (16%)
Query: 306 EELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITV-------T 358
E+ V R LCP KIG +IG+GG +K +R + ++I + +T +E V+T+
Sbjct: 41 EDTVYRYLCPGRKIGSIIGRGGEIVKQLRVDTKSKIRIGETVPGCEERVVTIYSSSDETN 100
Query: 359 AIESPDDIKSMAVEAVLLLQTKI--------NDEDDDTVTIRLLVSSKVIGCIIGKSGSI 410
A + D S A +A+ + ++ + E+ VT+RLLV S IGC+IGK G I
Sbjct: 101 AFDDSDTFVSPAQDALFRVHDRVVSEEVHGEDSEEASQVTVRLLVPSDQIGCVIGKGGQI 160
Query: 411 INEIRKRTKADVRISKGDK-PKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRD 469
I IR + A VRI K D P CA ++DELV++ GE VR AL QI RL D+
Sbjct: 161 IQSIRSESGAQVRILKDDHLPSCALSSDELVQISGEPSLVRKALYQIASRLHDNP----- 215
Query: 470 GSRNPPVGADHI---YSSGTGISMP----PLLPSIPPVGPLGYDQRADSGSGIGMLSSSS 522
SR+ + A + YSSG + P P++ P VG G
Sbjct: 216 -SRSQHLLASAVPTGYSSGGSLMGPTSGAPIMGLAPLVGTYG------------------ 256
Query: 523 LYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKI 582
GY GDS S S YS+ +L ++ P +G VIGK G + IR+
Sbjct: 257 --GY----RGDSGDWSRSLYSAPRDEASSKEFSLRLVCPIGNIGGVIGKGGVIINQIRQE 310
Query: 583 SGATIEMSDSKSSRGD 598
SGA I++ + ++ D
Sbjct: 311 SGAAIKVDSTSAAEAD 326
>gi|225464083|ref|XP_002269250.1| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
vinifera]
Length = 648
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 186/623 (29%), Positives = 304/623 (48%), Gaps = 75/623 (12%)
Query: 37 VIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDV 96
V +R+LC IG VIGKSG ++ ++ +T AR++V D + RV+ + + +
Sbjct: 51 VAFRLLCHASRIGGVIGKSGVIVKQLQSDTGARIRVEDSPSTSDHRVILVIAPASVNRRI 110
Query: 97 EVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIG 156
+ + E AAQ+A+L+V I VA D C++L +SQ ++IG
Sbjct: 111 ALQGSSEEVE-ASAAQEAVLRVFERILE-VAAVVDGVPP-GGVVSCRLLAETSQVGSVIG 167
Query: 157 KAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMY 216
K G ++++R ++ + IKV +E +CA D V I G+ AVKKAL A+S +
Sbjct: 168 KGGKVVEKIRRESGSKIKVL---TAEKLPTCAASTDEMVEIEGDVLAVKKALVAVSRRLQ 224
Query: 217 KFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDL 276
P D +T + P ++P P L+ +LP +PS +
Sbjct: 225 D-CPNVD---KTKLIGGRPLEVVPQQSLPDPRVDLFQQRGSVLPP--IPS--------NT 270
Query: 277 QGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQA 336
YA + P+ S +S L + +E++ ++LC +++G VIGKGG +K+++
Sbjct: 271 ISYAS--GSRPL-SINTERISTLDPKTSQQEVIFKILCSNDRVGGVIGKGGTIVKALQNE 327
Query: 337 SGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKI----------NDEDD 386
+GA I V DE +IT+TA E+P+ S A V+L+ + +
Sbjct: 328 AGASISVGAPVAECDERLITITASENPESRYSPAQNGVILVFNRSIEAGIEKGLDSGSKG 387
Query: 387 DTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDK-PKCADANDELVEVVGE 445
V+ RL+V S +GC++GK G+II+E+RK + A +RI D+ PKCA ND++V++ GE
Sbjct: 388 SPVSARLVVPSNQVGCLMGKGGTIISEMRKASGAGIRIIGSDQVPKCASENDQVVQISGE 447
Query: 446 VGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGY 505
+V+D L I RLRD+ + +G GI + I P G +
Sbjct: 448 FVNVQDGLYHITGRLRDNLFPSKT-------------LNGAGIRSSSAMNEISPYGRVRD 494
Query: 506 DQRADSGSGIGMLSSSSLYGYGSLSMG--------DSPYGSMSSYSSKLYGGLPP----- 552
S +G+ S S + + SM D P S + S+ G+ P
Sbjct: 495 PASFGLHSSVGVSPSFSRHTTLTQSMDHLGLSHSLDHPT-SPRLWPSQTVTGVNPRNIKG 553
Query: 553 --------------PLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGD 598
T+E+++P N +G V G+ G+NLA +RKISGA + + + + D
Sbjct: 554 GIELGSGSKSAIITNTTVEIVIPENVIGSVYGENGNNLARLRKISGAKVTLHEPRPGTSD 613
Query: 599 RVALISGTPEQKRAAENLIQAFI 621
R+ +ISGTP++ +AA++L+QAFI
Sbjct: 614 RIVIISGTPDETQAAQSLLQAFI 636
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 91/384 (23%), Positives = 167/384 (43%), Gaps = 57/384 (14%)
Query: 24 RINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRV 83
RI+ D K +++ VI++ILC + +G VIGK G ++ +++ E A + V P +R+
Sbjct: 286 RISTLDPKTSQQEVIFKILCSNDRVGGVIGKGGTIVKALQNEAGASISVGAPVAECDERL 345
Query: 84 VTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKV-HAAIANAVANATDNDKKRKEKEEC 142
+TI + N + AQ+ ++ V + +I + D+ K
Sbjct: 346 ITITA------------SENPESRYSPAQNGVILVFNRSIEAGIEKGLDSGSK-GSPVSA 392
Query: 143 QILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESE 202
+++VPS+Q ++GK G I +R + I++ S+ CA E D V ISGE
Sbjct: 393 RLVVPSNQVGCLMGKGGTIISEMRKASGAGIRII---GSDQVPKCASENDQVVQISGEFV 449
Query: 203 AVKKALFAIS---------------AIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYP 247
V+ L+ I+ A + S +I VR+ P S + S V + P
Sbjct: 450 NVQDGLYHITGRLRDNLFPSKTLNGAGIRSSSAMNEISPYGRVRD-PASFGLHSSVGVSP 508
Query: 248 PGGLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTWPVYS-TGL---SLVSGLVGAS 303
+ + + L P L WP + TG+ ++ G+ S
Sbjct: 509 SFSRHTTLTQSMDHLGLSHSLDHPTSPRL---------WPSQTVTGVNPRNIKGGIELGS 559
Query: 304 QSEELVI-----RVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
S+ +I ++ P N IG V G+ G + +R+ SGA++ + + + + ++ ++
Sbjct: 560 GSKSAIITNTTVEIVIPENVIGSVYGENGNNLARLRKISGAKVTLHEPRPGTSDRIVIIS 619
Query: 359 AIESPDDIKSMAVEAVLLLQTKIN 382
+PD+ ++ A LLQ I+
Sbjct: 620 G--TPDETQA----AQSLLQAFIH 637
>gi|357501947|ref|XP_003621262.1| KH domain-containing protein [Medicago truncatula]
gi|355496277|gb|AES77480.1| KH domain-containing protein [Medicago truncatula]
Length = 571
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 197/577 (34%), Positives = 290/577 (50%), Gaps = 82/577 (14%)
Query: 6 KRYRSQRDNDRDGKNQKRRINEKDEKG-------NEESVIYRILCPDGVIGSVIGKSGKV 58
KR S D + N KRR DE ++ +YR LCP IGS+IG+ G++
Sbjct: 11 KRSHSHNSVDDNRTNNKRRNPNTDETTPRDTFHITQDDTVYRYLCPVRKIGSIIGRGGEI 70
Query: 59 INSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKV 118
+ +R +T+A++++ + PG +RVVT+YS + D E EF +C A DAL+++
Sbjct: 71 VKQLRLDTKAKIRIGETVPGCDERVVTVYSVSDESNDFEDSGEF-----MCPAMDALVRI 125
Query: 119 HA-AIANAVANATDNDKKRKEKE-----ECQILVPSSQSANIIGKAGATIKRLRSKTRTS 172
H IA + D D ++ + ++LV S Q +IGK G ++ +RS+T
Sbjct: 126 HQKVIAEDLRGVEDEDVDMEKVDGGDLVTAKLLVASDQIGCVIGKGGQIVQNIRSETGAQ 185
Query: 173 IKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVRE 232
I++ KD P CA+ D V ISGE VKKAL ++A ++ D P T
Sbjct: 186 IRIL-KDDRLPL--CALNSDELVQISGEIAVVKKALIQVAARLH------DNPSRT---- 232
Query: 233 APPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTWPVYSTG 292
++ S VP G+Y + ++ S I+G A + G V
Sbjct: 233 ---QHLLTSAVP-----GVYAASGSMVGSHGGAPIMGMAPIGG----GYGGYKGDVVDYP 280
Query: 293 LSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDE 352
S+ G +E +R +CP IG VIGKGGG I IRQ SGA I VD + D+
Sbjct: 281 RSMYPGSRDEGSVKEFSVRFVCPTANIGGVIGKGGGIINQIRQDSGANIKVDSSATEGDD 340
Query: 353 CVITVTAIESPDDIKSMAVEAVLLLQTKIND--EDDD---TVTIRLLVSSKVIGCIIGKS 407
C+I ++A E +D S +EA +LLQ + ++ E D + T RLLVSS IGC+IGK
Sbjct: 341 CLIAISARELFEDPFSATIEAAVLLQPRCSEKVERDSGILSFTSRLLVSSSRIGCLIGKG 400
Query: 408 GSIINEIRKRTKADVRI-SKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALK 466
GSII E+R+ TKA++RI SK D PK A +DE+V++ GE+ +DAL+Q++ RLR + L
Sbjct: 401 GSIITEMRRLTKANIRILSKEDLPKIATEDDEMVQISGELDIAKDALLQVLTRLRAN-LF 459
Query: 467 DRDGSRNPPVGADHIYSSGTGISMPPLLPSIP--PVGP--LGYDQRADSGSGIGMLSSSS 522
D++ S + +PP+L +P P GP Y+ R G G S S
Sbjct: 460 DKERSVSSL--------------LPPVLAYLPASPEGPDSFSYEGRDGRRHGRGGYSYSD 505
Query: 523 LYG-------------YGSLSMG-DSPYGSMSSYSSK 545
YG YGS +G PYG+ SY+++
Sbjct: 506 GYGGSSDFVSGDGYGNYGSSQLGRGGPYGAYGSYAAE 542
>gi|413933965|gb|AFW68516.1| hypothetical protein ZEAMMB73_983755 [Zea mays]
Length = 537
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 152/467 (32%), Positives = 245/467 (52%), Gaps = 58/467 (12%)
Query: 3 DSGKRYRSQRDNDRDGKNQKRRINEKDEKGNEESV--IYRILCPDGVIGSVIGKSGKVIN 60
+S KR S D DGK ++ D + E + IYRILCP IGSV+G+ G ++
Sbjct: 10 NSKKRRHSNSD---DGKRKRLSSRHDDTSMSSEPIETIYRILCPAKKIGSVLGRGGDIVK 66
Query: 61 SIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKE------DVEVDDEFNDKEPLCAAQDA 114
++R+ET+A+++V D PGA +RV+ I+++ E + ++ D + +P C AQDA
Sbjct: 67 ALREETKAKIRVADSIPGADERVIIIFNYQNQPELTDEAAEKQISDGLGNMKPHCFAQDA 126
Query: 115 LLKVHAAI-ANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSI 173
LLK+H I A+ + + +D+ + +ILV +Q ++GK G+ I++LRS T I
Sbjct: 127 LLKIHDKIVADEIYDEVAHDES-SDDVTARILVQGNQVGCLLGKGGSIIQQLRSDTGAGI 185
Query: 174 KVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLE------ 227
+V +SE CA++ D V ISG V+KAL+ IS +++ +E+ PLE
Sbjct: 186 RVL---SSENLPQCALQSDELVQISGAPSLVRKALYEISTRLHQHPRKENRPLEQIIDAS 242
Query: 228 TTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTWP 287
T + P++ + + + P + P RS P +P
Sbjct: 243 TQRKHESPTLQHENPMLPHLHSHHPPPIPLLDPYRSGPQ-------------------YP 283
Query: 288 VYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDT- 346
V S++EE IR+LC IG VIGK G ++ + Q +GA+I V +
Sbjct: 284 V--------------SETEEFSIRILCASELIGSVIGKSGANVRRVEQQTGARIKVQEID 329
Query: 347 KDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKIN-DEDDDTVTIRLLVSSKVIGCIIG 405
KD E +I V++ E P + S +EA++LL K++ + + RL+V S +GCI+G
Sbjct: 330 KDASGERLIIVSSNEIPTEPISPTIEALILLHDKVSASSEKHHSSTRLVVPSNKVGCILG 389
Query: 406 KSGSIINEIRKRTKADVRI-SKGDKPKCADANDELVEVVGEVGSVRD 451
+ G +I E+R+RT A++R+ SK DKPK DELV+ G++ + D
Sbjct: 390 EGGQVITEMRRRTGAEIRVYSKADKPKYLSFGDELVQAAGQIHGLED 436
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/346 (27%), Positives = 158/346 (45%), Gaps = 58/346 (16%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
E + R+LCP KIG V+G+GG +K++R+ + A+I V D+ DE VI + ++ ++
Sbjct: 42 ETIYRILCPAKKIGSVLGRGGDIVKALREETKAKIRVADSIPGADERVIIIFNYQNQPEL 101
Query: 367 KSMAVE------------------AVLLLQTKI----------NDEDDDTVTIRLLVSSK 398
A E A+L + KI +DE D VT R+LV
Sbjct: 102 TDEAAEKQISDGLGNMKPHCFAQDALLKIHDKIVADEIYDEVAHDESSDDVTARILVQGN 161
Query: 399 VIGCIIGKSGSIINEIRKRTKADVRI-SKGDKPKCADANDELVEVVGEVGSVRDALVQII 457
+GC++GK GSII ++R T A +R+ S + P+CA +DELV++ G VR AL +I
Sbjct: 162 QVGCLLGKGGSIIQQLRSDTGAGIRVLSSENLPQCALQSDELVQISGAPSLVRKALYEIS 221
Query: 458 LRLRDDALKDRDGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGM 517
RL K+ N P+ + I + T P++ P+ + I +
Sbjct: 222 TRLHQHPRKE-----NRPL--EQIIDASTQRKHES--PTLQHENPMLPHLHSHHPPPIPL 272
Query: 518 LSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLA 577
L PY S Y ++ +L + +G VIGK+G+N+
Sbjct: 273 L---------------DPYRSGPQYPV----SETEEFSIRILCASELIGSVIGKSGANVR 313
Query: 578 NIRKISGATIEMSD-SKSSRGDRVALISGTPEQKRAAENLIQAFIM 622
+ + +GA I++ + K + G+R+ ++S I+A I+
Sbjct: 314 RVEQQTGARIKVQEIDKDASGERLIIVSSNEIPTEPISPTIEALIL 359
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 123/255 (48%), Gaps = 36/255 (14%)
Query: 385 DDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVG 444
+ + +IR+L +S++IG +IGKSG+ + + ++T A +++ + DK DA+ E + +V
Sbjct: 286 ETEEFSIRILCASELIGSVIGKSGANVRRVEQQTGARIKVQEIDK----DASGERLIIVS 341
Query: 445 E-------VGSVRDALVQIILRLRDDALKDRDGSR--NPPVGADHIYSSGTGISMPPLLP 495
+ +AL+ + ++ + K +R P I G
Sbjct: 342 SNEIPTEPISPTIEALILLHDKVSASSEKHHSSTRLVVPSNKVGCILGEG---------- 391
Query: 496 SIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSS-YSSKLYGGLPPPL 554
G + + R +G+ I + S + Y LS GD + + + Y GLP
Sbjct: 392 -----GQVITEMRRRTGAEIRVYSKADKPKY--LSFGDELVQAAGQIHGLEDYRGLPSAS 444
Query: 555 -----TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQ 609
T+E+ +P +++ ++G G NLA IR+ISGA + + ++ + + V I GT +Q
Sbjct: 445 GRFSSTIELRIPNSSLESIVGVGGVNLAEIRQISGARLRLHEAHAGSSESVVEIQGTLDQ 504
Query: 610 KRAAENLIQAFIMAT 624
+AA++L++ FI A
Sbjct: 505 AKAAQSLLEGFISAN 519
>gi|449516663|ref|XP_004165366.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 643
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 187/616 (30%), Positives = 309/616 (50%), Gaps = 64/616 (10%)
Query: 37 VIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH--VKDKE 94
V +R+LC IG VIGKSG VI ++Q T +++V + + DRVVT+ + +
Sbjct: 58 VAFRMLCHASRIGGVIGKSGFVIKQLQQSTGVKIRVEEAPSESPDRVVTVIGSPALTSRV 117
Query: 95 DVEVDDEFNDKEPLCA-AQDALLKVHAAIANAVAN-ATDNDKKRKEKEECQILVPSSQSA 152
+E + + +E + AQ+ LLKV I A C++L +Q
Sbjct: 118 FLEQNSGASGEEVEASKAQEGLLKVFERILEVAAEIEGVEVGAEVGVVYCRLLADVAQVG 177
Query: 153 NIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAIS 212
++IGK G ++++R ++ I+V ++ +CA D + I G+ A+KKAL A+S
Sbjct: 178 SVIGKGGKVVEKIRKESGCRIRVL----TDKLPACAGPSDEMIEIEGDVWAIKKALLAVS 233
Query: 213 AIMYKFSPREDIPLETTVREAPPSIIIPSDVP-IYPPGGLYPNAD-PILPSRSVPSILGA 270
+ P E + TVR P +I +P ++ L N+ PILPS S +I +
Sbjct: 234 RRLQDCPPSE----KRTVR--PAEAVIHETLPDLHMDHILQRNSVLPILPSSS--NIFAS 285
Query: 271 ARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTI 330
+ + + P T ++ +++V ++LC ++IG VIGKGG +
Sbjct: 286 G----IHSLSIDADMLPPVDTNVA----------QQDVVFKILCANDRIGGVIGKGGTIV 331
Query: 331 KSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKIND------- 383
++++ SGA + V + DE +I++TA E+ + S A +AV+L+ ++ D
Sbjct: 332 RALQNESGATVSVGPSVTGCDERLISITASENIESRYSPAQKAVVLVFSRSVDVAIEKWQ 391
Query: 384 ---EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDK-PKCADANDEL 439
V RL+V S +GC++GK G II+EIRK T ++RI D+ P CA +DE+
Sbjct: 392 ESSSKGSPVVARLVVPSNQVGCVLGKGGVIISEIRKVTGTNIRIISSDQVPNCAAESDEI 451
Query: 440 VEVVGEVGSVRDALVQIILRLRDDAL-----KDRDGS---RNPPVGADHIYSSGTGISMP 491
V++ GE +V+DAL + RLRD+ + RD + R+ PVG H G+ +
Sbjct: 452 VQISGEFSNVQDALYNVTGRLRDNLFLVPYGRVRDTAPLVRSTPVGTSH----GSFMQHS 507
Query: 492 PLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYG--- 548
S LG DS S G+ SL G S ++ D+ G S S G
Sbjct: 508 TAQSS----DDLGLSHSLDSPSSPGLWPPQSLSGISSRAISDAGRGLPSHRSGVQLGSGN 563
Query: 549 --GLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGT 606
+ T+E++VP + + V G+ G+NL +R+ISGA + + + DR+ +ISGT
Sbjct: 564 KTAIVTNTTVEIVVPDDVISLVYGENGTNLTRLRQISGAKVIVHEPDPITNDRLIVISGT 623
Query: 607 PEQKRAAENLIQAFIM 622
P++ +AA++L+ AFI+
Sbjct: 624 PDETQAAQSLLHAFIL 639
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 163/350 (46%), Gaps = 41/350 (11%)
Query: 34 EESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDK 93
++ V+++ILC + IG VIGK G ++ +++ E+ A V V G +R+++I +
Sbjct: 306 QQDVVFKILCANDRIGGVIGKGGTIVRALQNESGATVSVGPSVTGCDERLISITA----S 361
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
E++E AQ A++ V + + + +++VPS+Q
Sbjct: 362 ENIE--------SRYSPAQKAVVLVFSRSVDVAIEKWQESSSKGSPVVARLVVPSNQVGC 413
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISA 213
++GK G I +R T T+I++ +S+ +CA E D V ISGE V+ AL+ ++
Sbjct: 414 VLGKGGVIISEIRKVTGTNIRII---SSDQVPNCAAESDEIVQISGEFSNVQDALYNVTG 470
Query: 214 IMYKFSPREDIPL--ETTVREAPPSIIIPSDVPIYPPGGLY------PNADPILPSRSV- 264
+ R+++ L VR+ P + P+ G + ++D + S S+
Sbjct: 471 RL-----RDNLFLVPYGRVRDTAPLV---RSTPVGTSHGSFMQHSTAQSSDDLGLSHSLD 522
Query: 265 -PSILGAARVPDLQG-----YADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNK 318
PS G L G +D G P + +G+ L SG A + V ++ P +
Sbjct: 523 SPSSPGLWPPQSLSGISSRAISDAGRGLPSHRSGVQLGSGNKTAIVTNTTV-EIVVPDDV 581
Query: 319 IGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKS 368
I V G+ G + +RQ SGA++ V + ++ +I ++ +PD+ ++
Sbjct: 582 ISLVYGENGTNLTRLRQISGAKVIVHEPDPITNDRLIVISG--TPDETQA 629
>gi|356546743|ref|XP_003541782.1| PREDICTED: poly(rC)-binding protein 3-like [Glycine max]
Length = 663
Score = 218 bits (556), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 193/645 (29%), Positives = 320/645 (49%), Gaps = 86/645 (13%)
Query: 37 VIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH------- 89
V +R+LC IG VIGKSG VI +++Q T A++++ D + DRV+ + +
Sbjct: 45 VAFRLLCNASRIGGVIGKSGSVIKTLQQSTGAKIRIEDAPQESPDRVILVIADAALSCKV 104
Query: 90 -VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPS 148
++++E VEV AQ+ALLKV I A D + C+++ S
Sbjct: 105 LLRNEEVVEVSK----------AQEALLKVFDRILEVAAEMEGVDVGDRVMS-CRLVADS 153
Query: 149 SQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKAL 208
+Q+ ++IGK G ++R++ +T I+V D CA D + I G +VKKAL
Sbjct: 154 AQAGSVIGKGGKVVERIKKETGCKIRVLTDDLP----LCASASDEMIEIEGRVSSVKKAL 209
Query: 209 FAISA-----------IMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADP 257
A+S M P E + ET +A P I+ + P G L
Sbjct: 210 VAVSQRLQDCPSVNRIKMMGNKPYEIVQYETL--DALPREILTA----APRGTLT----- 258
Query: 258 ILPSRSVPSILGAARVPDLQGYADTGNTWPVYSTG--LSLVSGLVGASQSEELVIRVLCP 315
++P +V +L + + V+S ++ VS L + +E+ R+LC
Sbjct: 259 VVPHETVDHLLLRSSALSTLSSSSNSYATRVHSLSAEVNRVSSLEPKALQQEVSFRILCS 318
Query: 316 FNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVL 375
+++G VIGKGG +++++ +GA I + ++ +IT+ A E+P+ S A +A +
Sbjct: 319 NDRVGGVIGKGGNIVRALQSETGATISIGPLVAECEDRLITIAASENPESRYSPAQKAAV 378
Query: 376 LLQTK-----INDEDDD------TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRI 424
L+ ++ E D TVT+RL+V S +GC+IGK G I++EIRK T A++RI
Sbjct: 379 LVFSRSIEVGFEKELDSGLNKGSTVTVRLVVPSSQVGCLIGKGGVIVSEIRKATGANIRI 438
Query: 425 SKGDK-PKCADANDELVEVVGEVGSVRDALVQIILRLRDDAL---KDRDGSRNPPVGADH 480
D+ PKCA ND++V++ GE SV+DAL RLRD+ ++ G+R+ + +
Sbjct: 439 IGTDQVPKCASDNDQVVQISGEFSSVQDALYNATGRLRDNLFVSTQNSAGTRS--LSSLR 496
Query: 481 IYSSGTGIS--MPPLLPSIPP--------------VGPLGYDQRADSGSGIGMLSSS-SL 523
+ +S GI P +P + LG + D S G+ + + L
Sbjct: 497 VDTSPYGIQQDFVPHGSQLPATTSHCLSRHTFAQGIDHLGLSRNLDHPSSPGLWTRNLDL 556
Query: 524 YGYGSLSMGDSPYGSMSSYSS-KLYGGLPPPL----TLEVLVPANAVGKVIGKAGSNLAN 578
G S S+ D G S +L G + T+E++VP + + V G+ G NL
Sbjct: 557 AGINSRSINDFSLGLTSRKGGLELVSGSKSAIVTNTTVEIVVPDDTIDCVYGENGRNLVR 616
Query: 579 IRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFIMA 623
+R+ISGA + + + + DR+ +ISGTP++ +AA++L+QAFI++
Sbjct: 617 LRQISGAKVVIHEPRPGTSDRIIVISGTPDETQAAQSLLQAFILS 661
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 91/390 (23%), Positives = 164/390 (42%), Gaps = 60/390 (15%)
Query: 24 RINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRV 83
R++ + K ++ V +RILC + +G VIGK G ++ +++ ET A + + +DR+
Sbjct: 298 RVSSLEPKALQQEVSFRILCSNDRVGGVIGKGGNIVRALQSETGATISIGPLVAECEDRL 357
Query: 84 VTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQ 143
+TI + E + A + A+L +I D+ + +
Sbjct: 358 ITIAA-----------SENPESRYSPAQKAAVLVFSRSIEVGFEKELDSGLNKGSTVTVR 406
Query: 144 ILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEA 203
++VPSSQ +IGK G + +R T +I++ D CA + D V ISGE +
Sbjct: 407 LVVPSSQVGCLIGKGGVIVSEIRKATGANIRIIGTDQ---VPKCASDNDQVVQISGEFSS 463
Query: 204 VKKALFAISAIMYKFSPREDIPLETTVREAPPSI-IIPSDVPIY-------PPGGLYPNA 255
V+ AL+ + + R+++ + T S+ + D Y P G P
Sbjct: 464 VQDALYNATGRL-----RDNLFVSTQNSAGTRSLSSLRVDTSPYGIQQDFVPHGSQLPAT 518
Query: 256 DPILPSRSVPS----ILGAARVPDLQGYADTGNTWPV--------------YSTGLSLVS 297
SR + LG +R D + + W +S GL+
Sbjct: 519 TSHCLSRHTFAQGIDHLGLSRNLD---HPSSPGLWTRNLDLAGINSRSINDFSLGLTSRK 575
Query: 298 G---LVGASQS---EELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRD 351
G LV S+S + ++ P + I V G+ G + +RQ SGA++ + + +
Sbjct: 576 GGLELVSGSKSAIVTNTTVEIVVPDDTIDCVYGENGRNLVRLRQISGAKVVIHEPRPGTS 635
Query: 352 ECVITVTAIESPDDIKSMAVEAVLLLQTKI 381
+ +I ++ +PD+ ++ A LLQ I
Sbjct: 636 DRIIVISG--TPDETQA----AQSLLQAFI 659
>gi|308081899|ref|NP_001183640.1| uncharacterized protein LOC100502234 [Zea mays]
gi|238013618|gb|ACR37844.1| unknown [Zea mays]
gi|414867002|tpg|DAA45559.1| TPA: hypothetical protein ZEAMMB73_773291 [Zea mays]
gi|414867003|tpg|DAA45560.1| TPA: hypothetical protein ZEAMMB73_773291 [Zea mays]
gi|414867004|tpg|DAA45561.1| TPA: hypothetical protein ZEAMMB73_773291 [Zea mays]
Length = 541
Score = 218 bits (555), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 180/552 (32%), Positives = 281/552 (50%), Gaps = 50/552 (9%)
Query: 5 GKRYRSQRDNDRDGKNQKRRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQ 64
GKR Q D +G +++R + + +YR LC IGS+IG+ G++ +R
Sbjct: 9 GKR---QSDFTENGGSKRRNPGDDTYAPGPDDTVYRYLCASRKIGSIIGRGGEIAKQLRT 65
Query: 65 ETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVE-VDDEFNDKEPLCAAQDALLKVHAAIA 123
ET+A++++ + PG +RVVTI+S + ++ +DE +C AQDAL +VH +A
Sbjct: 66 ETQAKIRIGESVPGCDERVVTIFSTSRKTNTIDGAEDE------VCPAQDALFRVHERLA 119
Query: 124 NAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEP 183
+ ++ ++ + ++LVPS Q IIGK G I+ +RS+T I+V D
Sbjct: 120 SDEGLGNEDSEEISPQVTVRLLVPSDQIGCIIGKGGQIIQGIRSETGAQIRVLSNDH--- 176
Query: 184 THSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDV 243
+CA+ D + ISG++ V+KAL +S+ ++ + L +++ +
Sbjct: 177 IPACAISGDELLQISGDTVVVRKALHQVSSRLHNNPSKSQHLLASSLTQP---------- 226
Query: 244 PIYPPGGLYPNADPILPSRSVPSILGAARVPDLQGY-ADTGNTWPVYSTGLSLVSGLVGA 302
YP + + S + P + +P GY D WP SL
Sbjct: 227 --------YPGSTHLGGSSTAPVVGITPVIPPYGGYKGDVAGDWP------SLYQPRRDE 272
Query: 303 SQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTK-DNRDECVITVTAIE 361
S ++E +R+LC +G VIGKGGG IK IRQ SGA I V + D D+C+ITV+A E
Sbjct: 273 SSAKEFSLRLLCAAANVGGVIGKGGGIIKQIRQESGALIKVASSNSDPDDDCIITVSAKE 332
Query: 362 SPDDIKSMAVEAVLLLQTKINDEDD-----DTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
+D S ++A + LQ + +++ D + T RLLVS+ IGC+IGK GSII EIR+
Sbjct: 333 FFEDPVSPTIDAAVRLQPRCSEKSDLESAEQSYTTRLLVSTSRIGCLIGKGGSIITEIRR 392
Query: 417 RTKADVRI-SKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRN-- 473
++A+VRI SK + PK A +DE+V++ G + R+ALVQI RL+ + +R+GS +
Sbjct: 393 TSRANVRILSKENVPKVAAEDDEMVQITGGLDVARNALVQIATRLKANFF-EREGSLSAF 451
Query: 474 PPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGD 533
PPV H +G L PVG Y + + S S YG
Sbjct: 452 PPVIPYHPLPAGVSDEPKYLGRDTKPVGHYLYSSGFRTSD--DTIPSDSYASYGGSQAPG 509
Query: 534 SPYGSMSSYSSK 545
YG+ S YS++
Sbjct: 510 RGYGAYSGYSAR 521
>gi|356516077|ref|XP_003526723.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 647
Score = 218 bits (555), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 191/626 (30%), Positives = 295/626 (47%), Gaps = 86/626 (13%)
Query: 39 YRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEV 98
YRILC D G VIGKSG +I SIRQ T A + V + PG ++R++ I D
Sbjct: 63 YRILCHDLKAGGVIGKSGSIIKSIRQHTGAWINVHELMPGDEERIIEI-------SDTRR 115
Query: 99 DDEFNDKEPLCAAQDALLKVHAAI--ANAVANATDNDKK---------RKEKEECQILVP 147
D AQ+ALL +H I ++A ++D++ +++ +++V
Sbjct: 116 RDPEGRMPSFSPAQEALLLIHERILESDAAFGVAEDDEEYGAGRGGGAGRDRVATRLVVS 175
Query: 148 SSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKA 207
++GK G I+++R +T+T I++ P+D + P C + V + G+ AVK A
Sbjct: 176 RMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLP--RCVSMSEEIVQVVGDVNAVKNA 233
Query: 208 LFAISAIMYKFSPREDIPLETTVREAPPSIIIPSD--VPIYPPGGLYPNAD-PILPSRSV 264
L IS+ + + R+ V +P P D VP G + D SR
Sbjct: 234 LVIISSRLRESQHRDRSHFHGRV-HSPERFFSPDDDYVPHVTSGSRRSSVDGASFGSRGS 292
Query: 265 PSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIG 324
+ P L YA PV G G EELV R+LCP K+ +IG
Sbjct: 293 NTNSRNNNHPSL-SYAMEPGAAPVVDDA----QGFYG----EELVFRILCPVEKVDLIIG 343
Query: 325 KGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKIND- 383
+ G ++ ++ G + V D DE +I +T+ E PDD A EA+L +QT+I D
Sbjct: 344 ESDGIVEFLQSEVGVDVKVTDPVGGSDEQIIIITSEEGPDDELFPAQEALLHIQTRIVDL 403
Query: 384 --EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRI-SKGDKPKCADANDELV 440
+ D+T+T RL+V S I C+ GK S ++EIR+ T A+++I + D P C DELV
Sbjct: 404 VLDKDNTITTRLVVPSSEIECLDGKDVS-LSEIRRLTGANIQILPRDDLPLCVAKTDELV 462
Query: 441 EVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSGTGISMPPLLPSIPPV 500
++VGE+ + RDA+V++ RLR +D R+P IP
Sbjct: 463 QIVGEIKAARDAVVEVTSRLRSYLYRDF-FQRDP----------------------IPLP 499
Query: 501 GPLGYDQRADSGSGIGMLSSSSLY---------------GYGSLSMGDSPYGSMSSYSSK 545
PL + + S + + + +S+ Y G S +G S
Sbjct: 500 APLPGAEASSSNNIVPVAETSTTYQNVQTVAAALPPKETGGSSTEVGKQ---KESGRRDD 556
Query: 546 LYGGL---PPPL----TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGD 598
+ GL PL TLEV++P AV K+I K+ S LA I ++SGA + + + +
Sbjct: 557 VLSGLNRIAVPLVTRSTLEVVIPEYAVPKLIAKSKSKLAQISELSGANVTLVEDRPDVTQ 616
Query: 599 RVALISGTPEQKRAAENLIQAFIMAT 624
++ ISGTPEQ A++L+Q FI++T
Sbjct: 617 KIIQISGTPEQAERAQSLLQGFILST 642
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 98/197 (49%), Gaps = 28/197 (14%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKE 94
E +++RILCP + +IG+S ++ ++ E VKV DP G+ ++++ I S
Sbjct: 325 EELVFRILCPVEKVDLIIGESDGIVEFLQSEVGVDVKVTDPVGGSDEQIIIITS------ 378
Query: 95 DVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANI 154
+E D E L AQ+ALL + I + V + + R ++VPSS+ +
Sbjct: 379 -----EEGPDDE-LFPAQEALLHIQTRIVDLVLDKDNTITTR-------LVVPSSEIECL 425
Query: 155 IGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAIS-- 212
GK ++ +R T +I++ P+D P C + D V I GE +A + A+ ++
Sbjct: 426 DGK-DVSLSEIRRLTGANIQILPRD-DLPL--CVAKTDELVQIVGEIKAARDAVVEVTSR 481
Query: 213 --AIMYK-FSPREDIPL 226
+ +Y+ F R+ IPL
Sbjct: 482 LRSYLYRDFFQRDPIPL 498
>gi|357476219|ref|XP_003608395.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355509450|gb|AES90592.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 616
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 190/649 (29%), Positives = 308/649 (47%), Gaps = 107/649 (16%)
Query: 31 KGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHV 90
K N V++R+LC IG+ IGKSG VI S++Q T AR+++ D +RV+ + ++
Sbjct: 14 KRNNGHVVFRLLCHASRIGAFIGKSGSVIKSLQQLTGARIRIDDAPVDCPERVIVVIVNL 73
Query: 91 KDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQ 150
DV ++ Q+ALLKV I + A +D + C++LV + Q
Sbjct: 74 NGDGDVSLN-----------PQEALLKVFERILDVAAAESDGNGVGDRVVSCRLLVNAGQ 122
Query: 151 SANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFA 210
+ +IGK G + ++R+ T I+V ++ +C D + I G + +VKKAL A
Sbjct: 123 AGGVIGKGGMVVAKIRADTGCRIRVL----NDKLPACTKPSDEIIEIQGIASSVKKALVA 178
Query: 211 ISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYP-NADPILPSRSVPSILG 269
++ + P + T + P ++ P GL N D L S S
Sbjct: 179 VAGRLQDCPPLD----RTKMMGTRPYEAFQNETSAVPHEGLTDLNMDFRLQRSSAIST-- 232
Query: 270 AARVPDLQGYADTGNTWPVYSTGLSL----VSGLVGASQSEELVIRVLCPFNKIGRVIGK 325
+ N P S LS+ VS L + +E+ R+LC ++IG V+GK
Sbjct: 233 ---------SSIRSNGVPSKSHPLSVEDNRVSSLDPEALKQEVTFRILCSGDRIGAVLGK 283
Query: 326 GGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTK----- 380
GG +K+++ +GA I V ++ +IT+TA+E+P+ S A EAV+L+ +
Sbjct: 284 GGSIVKALQNETGANISVGPPVVECEDRLITITALENPESRFSPAQEAVVLVFCRSIECC 343
Query: 381 ------INDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISK-GDKPKCA 433
+ +VT +L+V S +G ++GK G+I++E+RK T +RI++ G+ PKCA
Sbjct: 344 IEKVVDWRSNKESSVTAQLVVPSNQVGVLLGKGGAIVSEMRKATWTSIRITRNGEVPKCA 403
Query: 434 DANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIY-----SSGTGI 488
ND++V++ GE+ +VRDAL RLR DHI+ S GTG
Sbjct: 404 SFNDQVVQISGELPNVRDALYNATRRLR-----------------DHIFLIAQNSGGTGP 446
Query: 489 SMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYG 548
P SI P+G LG S G + S S + +LS S ++ K+ G
Sbjct: 447 YRRP-RDSI-PLG-LGGQSVVGSNHGPSIHSLSQSMDHLTLSRNSGRSASSGVWAPKVVG 503
Query: 549 G------------LPP----------------------PLTLEVLVPANAVGKVIGKAGS 574
G L P T+E+++P + +G V G+ GS
Sbjct: 504 GKNSRYTDDAGRRLNPREGDLELASGSNTVIGNAAIITNTTVEIMLPNDIIGSVYGENGS 563
Query: 575 NLANIRKISGATIEMSDSKSSRGDRVALI-SGTPEQKRAAENLIQAFIM 622
NL +R+ISGA + + + DR ++ SGTP++ +AA++L+QA+I+
Sbjct: 564 NLDQLRQISGAKVVFHEPRPGTSDRAKIVLSGTPDETQAAQSLLQAYIL 612
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 94/353 (26%), Positives = 159/353 (45%), Gaps = 58/353 (16%)
Query: 21 QKRRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAK 80
+ R++ D + ++ V +RILC IG+V+GK G ++ +++ ET A + V P +
Sbjct: 250 EDNRVSSLDPEALKQEVTFRILCSGDRIGAVLGKGGSIVKALQNETGANISVGPPVVECE 309
Query: 81 DRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHA-AIANAVANATDNDKKRKEK 139
DR++TI + +E N + AQ+A++ V +I + D ++
Sbjct: 310 DRLITITA-------LE-----NPESRFSPAQEAVVLVFCRSIECCIEKVVDWRSNKESS 357
Query: 140 EECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISG 199
Q++VPS+Q ++GK GA + +R T TSI++T ++ P CA D V ISG
Sbjct: 358 VTAQLVVPSNQVGVLLGKGGAIVSEMRKATWTSIRIT-RNGEVP--KCASFNDQVVQISG 414
Query: 200 ESEAVKKALFAISAIM--YKF-------------SPREDIPLETTVREAPPSIIIPSDVP 244
E V+ AL+ + + + F PR+ IPL + S PS
Sbjct: 415 ELPNVRDALYNATRRLRDHIFLIAQNSGGTGPYRRPRDSIPLGLGGQSVVGSNHGPS--- 471
Query: 245 IYPPGGLYPNADPILPSRS----------VPSILGA--ARVPDLQGYADTGNTWPVYSTG 292
I+ L + D + SR+ P ++G +R D D G
Sbjct: 472 IH---SLSQSMDHLTLSRNSGRSASSGVWAPKVVGGKNSRYTD-----DAGRRLNPREGD 523
Query: 293 LSLVSG---LVG-ASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQI 341
L L SG ++G A+ + ++ P + IG V G+ G + +RQ SGA++
Sbjct: 524 LELASGSNTVIGNAAIITNTTVEIMLPNDIIGSVYGENGSNLDQLRQISGAKV 576
>gi|7671496|emb|CAB89337.1| putative protein [Arabidopsis thaliana]
Length = 568
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 189/604 (31%), Positives = 291/604 (48%), Gaps = 122/604 (20%)
Query: 6 KRYRSQRDNDRDGKNQKR-RINEKDEKG-NEESVIYRILCPDGVIGSVIGKSGKVINSIR 63
KR R Q D D +G +++R R +++D + + ++R LCP IGSVIG+ G ++ +R
Sbjct: 17 KRSRPQSDYDDNGGSKRRYRGDDRDSLVIDRDDTVFRYLCPVKKIGSVIGRGGDIVKQLR 76
Query: 64 QETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEP-LCAAQDALLKVHAAI 122
+TR+++++ + PG +RV+TIYS + + F D E L AQDAL ++H +
Sbjct: 77 NDTRSKIRIGEAIPGCDERVITIYSPSDET------NAFGDGEKVLSPAQDALFRIHDRV 130
Query: 123 ANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASE 182
A + D+ + K+ ++LVPS Q I+G+ G ++ +RS+T I++ KD +
Sbjct: 131 VADDARSEDSPEGEKQVT-AKLLVPSDQIGCILGRGGQIVQNIRSETGAQIRIV-KDRNM 188
Query: 183 PTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSD 242
P CA+ D + ISGE VKKAL I++ +++ R L ++
Sbjct: 189 PL--CALNSDELIQISGEVLIVKKALLQIASRLHENPSRSQNLLSSSGG----------- 235
Query: 243 VPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTW--PVYSTGLSLVSGLV 300
YP G L +A P ++G A P + Y W P+Y +
Sbjct: 236 ---YPAGSLMSHA-------GGPRLVGLA--PLMGSYGRDAGDWSRPLYQPPRN------ 277
Query: 301 GASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAI 360
+ E IR++ P I VIGKGG I +RQ + A I VD ++ ++C+IT++A
Sbjct: 278 -DPPATEFFIRLVSPVENIASVIGKGGALINQLRQETRATIKVDSSRTEGNDCLITISAR 336
Query: 361 ESPDDIKSMAVEAVLLLQTKIND--EDDD---TVTIRLLVSSKVIGCIIGKSGSIINEIR 415
E +D S +EAV+ LQ K +D E D + T RLLV S IGCI+GK G+II E+R
Sbjct: 337 EVFEDAYSPTIEAVMRLQPKCSDKVERDSGLVSFTTRLLVPSSRIGCILGKGGAIITEMR 396
Query: 416 KRTKADVRI-SKGDKPKCADANDELVEV-------------------------------- 442
+ TKA++RI K + PK A +DE+V+V
Sbjct: 397 RMTKANIRILGKENLPKVASDDDEMVQVNFMVLLLKFSLQFLLSRLRYFTWSVNSNSNFD 456
Query: 443 ---VGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSGTGISMPPLLPSIPP 499
GE+ ++AL+QI RLR + DR+G+ + ++ P+LP + P
Sbjct: 457 VQISGELDVAKEALIQITSRLRANVF-DREGAVS---------------ALMPVLPYV-P 499
Query: 500 VGP-----LGYDQRADSGSGIGMLSSSSLY--GYGSLSM---GDSPYGS----MSSYSSK 545
V P YD R L + Y GYGS + G SPYG+ SS
Sbjct: 500 VAPDAGDRFDYDSRDSR-----RLERGNPYPGGYGSSGVSAEGYSPYGAPVGGSSSTPYG 554
Query: 546 LYGG 549
+YGG
Sbjct: 555 VYGG 558
>gi|449438568|ref|XP_004137060.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 658
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 190/631 (30%), Positives = 310/631 (49%), Gaps = 74/631 (11%)
Query: 37 VIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH--VKDKE 94
V +R+LC IG VIGKSG VI ++Q T +++V + + DRVVT+ + +
Sbjct: 53 VAFRMLCHASRIGGVIGKSGFVIKQLQQSTGVKIRVEEAPSESPDRVVTVIGSPALTSRV 112
Query: 95 DVEVDDEFNDKEPLCA-AQDALLKVHAAIANAVAN-ATDNDKKRKEKEECQILVPSSQSA 152
+E + + +E + AQ+ LLKV I A C++L +Q
Sbjct: 113 FLEQNSGASGEEVEASKAQEGLLKVFERILEVAAEIEGVEVGAEVGVVYCRLLADVAQVG 172
Query: 153 NIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAIS 212
++IGK G ++++R ++ I+V ++ +CA D + I G+ A+KKAL A+S
Sbjct: 173 SVIGKGGKVVEKIRKESGCRIRVL----TDKLPACAGPSDEMIEIEGDVWAIKKALLAVS 228
Query: 213 AIMYKFSPREDIPLETTVREAPPSIIIPSDVP-IYPPGGLYPNAD-PILPSRSVPSILGA 270
+ P E + TVR P +I +P ++ L N+ PILPS S +I +
Sbjct: 229 RRLQDCPPSE----KRTVR--PAEAVIHETLPDLHMDHILQRNSVLPILPSSS--NIFAS 280
Query: 271 ARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTI 330
+ + + P T ++ +++V ++LC ++IG VIGKGG +
Sbjct: 281 G----IHSLSIDADMLPPVDTNVA----------QQDVVFKILCANDRIGGVIGKGGTIV 326
Query: 331 KSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKIND------- 383
++++ SGA + V + DE +I++TA E+ + S A +AV+L+ ++ D
Sbjct: 327 RALQNESGATVSVGPSVTGCDERLISITASENIESRYSPAQKAVVLVFSRSVDVAIEKWQ 386
Query: 384 ---EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDK-PKCADANDEL 439
V RL+V S +GC++GK G II+EIRK T ++RI D+ P CA +DE+
Sbjct: 387 ESSSKGSPVVARLVVPSNQVGCVLGKGGVIISEIRKVTGTNIRIISSDQVPNCAAESDEI 446
Query: 440 VEVVGEVGSVRDALVQIILRLRDDALKD---RDGSRNPPVGADHIYSS----GTGISMPP 492
V++ GE +V+DAL + RLRD+ G+RN G +Y G P
Sbjct: 447 VQISGEFSNVQDALYNVTGRLRDNLFSSVLSNSGTRNG--GGTSVYPETSPYGRVRDTAP 504
Query: 493 LLPSIPPVGP----------------LGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPY 536
L+ S P VG LG DS S G+ SL G S ++ D+
Sbjct: 505 LVRSTP-VGTSHGSFMQHSTAQSSDDLGLSHSLDSPSSPGLWPPQSLSGISSRAISDAGR 563
Query: 537 GSMSSYSSKLYG-----GLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSD 591
G S S G + T+E++VP + + V G+ G+NL +R+ISGA + + +
Sbjct: 564 GLPSHRSGVQLGSGNKTAIVTNTTVEIVVPDDVISLVYGENGTNLTRLRQISGAKVIVHE 623
Query: 592 SKSSRGDRVALISGTPEQKRAAENLIQAFIM 622
DR+ +ISGTP++ +AA++L+ AFI+
Sbjct: 624 PDPITSDRLIVISGTPDETQAAQSLLHAFIL 654
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 89/365 (24%), Positives = 164/365 (44%), Gaps = 51/365 (13%)
Query: 34 EESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDK 93
++ V+++ILC + IG VIGK G ++ +++ E+ A V V G +R+++I +
Sbjct: 301 QQDVVFKILCANDRIGGVIGKGGTIVRALQNESGATVSVGPSVTGCDERLISITA----S 356
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
E++E AQ A++ V + + + +++VPS+Q
Sbjct: 357 ENIE--------SRYSPAQKAVVLVFSRSVDVAIEKWQESSSKGSPVVARLVVPSNQVGC 408
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAI-- 211
++GK G I +R T T+I++ +S+ +CA E D V ISGE V+ AL+ +
Sbjct: 409 VLGKGGVIISEIRKVTGTNIRII---SSDQVPNCAAESDEIVQISGEFSNVQDALYNVTG 465
Query: 212 -------SAIMYKFSPRE----DIPLETT----VREAPPSIIIPSDVPIYPPGGLY---- 252
S+++ R + ET+ VR+ P + P+ G +
Sbjct: 466 RLRDNLFSSVLSNSGTRNGGGTSVYPETSPYGRVRDTAPLV---RSTPVGTSHGSFMQHS 522
Query: 253 --PNADPILPSRSV--PSILGAARVPDLQG-----YADTGNTWPVYSTGLSLVSGLVGAS 303
++D + S S+ PS G L G +D G P + +G+ L SG A
Sbjct: 523 TAQSSDDLGLSHSLDSPSSPGLWPPQSLSGISSRAISDAGRGLPSHRSGVQLGSGNKTAI 582
Query: 304 QSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESP 363
+ V ++ P + I V G+ G + +RQ SGA++ V + + +I ++ +P
Sbjct: 583 VTNTTV-EIVVPDDVISLVYGENGTNLTRLRQISGAKVIVHEPDPITSDRLIVISG--TP 639
Query: 364 DDIKS 368
D+ ++
Sbjct: 640 DETQA 644
>gi|356509231|ref|XP_003523354.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 644
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 194/618 (31%), Positives = 287/618 (46%), Gaps = 73/618 (11%)
Query: 39 YRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEV 98
YRILC D G VIGKSG +I SIRQ T A + V + PG ++R++ I D
Sbjct: 63 YRILCHDLKAGGVIGKSGSIIKSIRQHTGAWINVHELMPGDEERIIEI-------SDTRR 115
Query: 99 DDEFNDKEPLCAAQDALLKVHAAI-----ANAVANATDNDKKRKEKEE---CQILVPSSQ 150
D AQ+ALL +H I A VA + R + +++V
Sbjct: 116 RDPEGRMPSFSPAQEALLLIHERILESDAAFGVAEEDEEYGGRGGGRDRIATRLVVSRMH 175
Query: 151 SANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFA 210
++GK G I+++R +T+T I++ P+D + P C + V + G AVK AL
Sbjct: 176 VGCLLGKGGKIIEQMRMETKTQIRILPRDHNLP--RCVSMSEEIVQVVGNVNAVKNALVI 233
Query: 211 ISAIMYKFSPREDIPLETTVREAPPSIIIPSD--VPIYPPGGLYPNAD-PILPSRSVPSI 267
IS+ + + R+ V +P P D VP G + D SR +
Sbjct: 234 ISSRLRESQHRDRSHFHGRV-HSPERFFSPDDDYVPHVTSGSRRSSVDGASFGSRGSNTN 292
Query: 268 LGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGG 327
P L YA PV G G EELV R+LCP K+ R+IG+
Sbjct: 293 SRNNNHPSL-NYAMEPGAAPVVDDA----QGFYG----EELVFRILCPIEKVDRIIGESE 343
Query: 328 GTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKIND---E 384
G ++ ++ G + V D DE +I +T+ E PDD A EA+L +QT+I D +
Sbjct: 344 GIVEFLQNEVGVDVKVTDPVGGSDEQIIIITSEEGPDDELFPAQEALLHVQTRIVDLVLD 403
Query: 385 DDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDK-PKCADANDELVEVV 443
D+T+T RL+V S I C+ GK S ++EIR+ T A+++I D+ P C DELV++V
Sbjct: 404 KDNTITTRLVVPSSEIECLDGKDVS-LSEIRRLTGANIQILPRDELPLCVAKTDELVQIV 462
Query: 444 GEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSGTGISMPPLLP-------- 495
GE+ + RDA+V++ RLR +D + + +P LP
Sbjct: 463 GEIKAARDAVVEVTSRLRSYLYRD--------------FFQRDTVPLPAPLPGAAASSSN 508
Query: 496 SIPPV--GPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGL--- 550
+I PV P Y + + S G S G S L GL
Sbjct: 509 NIVPVTETPTTYQNLQTVAAAL----PSKETGGSSTETGKQ---KESDRRDDLLSGLNRI 561
Query: 551 PPPL----TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGT 606
PL TLEV++P AV K++ K+ S LA I ++SGA + + + + ++ ISGT
Sbjct: 562 AVPLVTRSTLEVVLPEYAVPKLVAKSKSKLAQISELSGANVTLVEDRPDVTQKIIQISGT 621
Query: 607 PEQKRAAENLIQAFIMAT 624
PEQ A++L+Q FI++T
Sbjct: 622 PEQAERAQSLLQGFILST 639
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 147/333 (44%), Gaps = 44/333 (13%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKE 94
E +++RILCP + +IG+S ++ ++ E VKV DP G+ ++++ I S
Sbjct: 322 EELVFRILCPIEKVDRIIGESEGIVEFLQNEVGVDVKVTDPVGGSDEQIIIITS------ 375
Query: 95 DVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANI 154
+E D E L AQ+ALL V I + V + + R ++VPSS+ +
Sbjct: 376 -----EEGPDDE-LFPAQEALLHVQTRIVDLVLDKDNTITTR-------LVVPSSEIECL 422
Query: 155 IGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAI 214
GK ++ +R T +I++ P+D C + D V I GE +A + A+ +++
Sbjct: 423 DGK-DVSLSEIRRLTGANIQILPRDE---LPLCVAKTDELVQIVGEIKAARDAVVEVTSR 478
Query: 215 MYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILG----- 269
+ + R+ +T +P P+ PG +++ I+P P+
Sbjct: 479 LRSYLYRDFFQRDT----------VPLPAPL--PGAAASSSNNIVPVTETPTTYQNLQTV 526
Query: 270 AARVPDLQGYADTGNTWPVYSTGL--SLVSGL--VGASQSEELVIRVLCPFNKIGRVIGK 325
AA +P + + T + L+SGL + + V+ P + +++ K
Sbjct: 527 AAALPSKETGGSSTETGKQKESDRRDDLLSGLNRIAVPLVTRSTLEVVLPEYAVPKLVAK 586
Query: 326 GGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
+ I + SGA + + + + + + +I ++
Sbjct: 587 SKSKLAQISELSGANVTLVEDRPDVTQKIIQIS 619
>gi|359386146|gb|AEV43362.1| poly C-binding protein [Citrus sinensis]
Length = 569
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 146/405 (36%), Positives = 227/405 (56%), Gaps = 34/405 (8%)
Query: 37 VIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYS------HV 90
+YRILCP IG VIGK+G ++ S+R+ET+A++ V D PG+++RV+ IYS
Sbjct: 47 TVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKT 106
Query: 91 KDK-EDVEVDDEFNDKEPLCAAQDALLKVHAAI--ANAVANATDNDKKRKEKEECQILVP 147
++K +D + + EP CAAQDALLKVH I + +D ++LVP
Sbjct: 107 QNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVP 166
Query: 148 SSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKA 207
++ ++GK G I+RLRS+T +I+V P D P CAM D V ISG+ K+A
Sbjct: 167 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPP---CAMNTDEMVQISGKPNVAKRA 223
Query: 208 LFAISAIMYKFSPREDIPLETTVR-------EAPPSIIIPSDVPIYPPGGLYPNADPILP 260
L+ +S ++++ +PR+D P + + +PP+ P ++P + P
Sbjct: 224 LYEVSTLLHQ-NPRKDKPPSSFPQAYGGQNFHSPPA----------PMADMHPLGNSSWP 272
Query: 261 SRSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIG 320
+R+ S+ G P + GY D + S S G +G S E +++LC KIG
Sbjct: 273 ARNS-SLHGMPSTPWMGGYGDQPSRMGSGSIN-SCPPGQMGEV-SAEFSMKILCSAGKIG 329
Query: 321 RVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTK 380
VIGKGG +K ++Q +GA I V+D + DE VI +A E + +S ++A+L LQ K
Sbjct: 330 GVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNK 389
Query: 381 IND-EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRI 424
++ + T+T RLLV S +GCI+G+ G +INE+R+RT+AD+R+
Sbjct: 390 TSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 434
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 102/335 (30%), Positives = 167/335 (49%), Gaps = 44/335 (13%)
Query: 300 VGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTA 359
G SQ + V R+LCP KIG VIGK G +KS+R+ + A+I V DT +E VI + +
Sbjct: 39 FGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYS 98
Query: 360 -------IESPDD-------IKSM-----AVEAVLLLQTKINDED------------DDT 388
++ DD +SM A +A+L + +I +ED + T
Sbjct: 99 SPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENST 158
Query: 389 VTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDK-PKCADANDELVEVVGEVG 447
+T RLLV + ++GC++GK G +I +R T A++R+ D+ P CA DE+V++ G+
Sbjct: 159 ITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPN 218
Query: 448 SVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQ 507
+ AL ++ L + KD+ PP Y S P + + P+G +
Sbjct: 219 VAKRALYEVSTLLHQNPRKDK-----PPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPA 273
Query: 508 RADSGSGIGMLSSSSLYGYGSL--SMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAV 565
R + S GM S+ + GYG MG GS++S G + ++++L A +
Sbjct: 274 R--NSSLHGMPSTPWMGGYGDQPSRMGS---GSINSCPPGQMGEVSAEFSMKILCSAGKI 328
Query: 566 GKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRV 600
G VIGK G N+ +++ +GA+I + D+ + +RV
Sbjct: 329 GGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERV 363
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/172 (20%), Positives = 69/172 (40%), Gaps = 25/172 (14%)
Query: 22 KRRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETR-------ARVKVVD 74
+ + +E EKG ++ R+L P +G ++G+ G VIN +R+ T+ ARVK+ D
Sbjct: 387 QNKTSEFSEKG---TITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQD 443
Query: 75 PFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDK 134
P PG+ + +V I E L +A + + +
Sbjct: 444 PHPGSSECIVDIRG---------------SSEHLISAHGTYQSFMTSGQSMKVQPSSYQN 488
Query: 135 KRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHS 186
++ CQ + S + + R+ ++ + P+ +S P H+
Sbjct: 489 INPQQSSCQTMSSHQSSYQNMNTQQSPYHRVNAQQSPYQNINPQQSSYPMHT 540
Score = 38.5 bits (88), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Query: 33 NEESVIY-RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV 73
NE S I R+L P+ ++G ++GK G VI +R ET A ++V+
Sbjct: 154 NENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVL 195
>gi|356519471|ref|XP_003528396.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 591
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 183/613 (29%), Positives = 310/613 (50%), Gaps = 75/613 (12%)
Query: 37 VIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDV 96
V +R+LC +G++IGKSG +I ++++ T A++++ D P + DRV+ + S D
Sbjct: 25 VTFRLLCHASRVGAIIGKSGVLIKTLQEATGAKIRIEDAPPDSPDRVI-LVSAPAAASDG 83
Query: 97 EVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIG 156
EV AQ ALLKV + + VA T + C++L +SQ +IG
Sbjct: 84 EVS----------TAQVALLKVFDRVLD-VAAETAGTEVGDRVVSCRLLADTSQVGAVIG 132
Query: 157 KAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMY 216
KAG ++++R T I+V +E +C D V + G+ +VKKAL A+S +
Sbjct: 133 KAGKVVEKIRMDTGCKIRVL----NEGLPACTAPSDEIVEVEGQLTSVKKALVAVSGCLQ 188
Query: 217 KFSPREDIPLETTVREAPPSIIIPSD---VPIYPPGGLYPNADPILPSRSVPSILGAARV 273
P P T + + ++ S+ VP+ L+ D L S S L
Sbjct: 189 DCPP----PDRTKMTGSRHYEVVRSETCSVPLESLTNLH--IDRRLQRSSTLSTLSNRSN 242
Query: 274 PDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSI 333
+ G P S ++ VS L + +E+ R++C +++G VIGKGG ++++
Sbjct: 243 GNASG-------APKLSAEVNRVSALDPKALQQEVTFRIICSNDRVGAVIGKGGSIVRAL 295
Query: 334 RQASGAQIDVDDTKDNRDECVITVTAIE-SPDDIKSMAVEAVLLLQTK-----------I 381
+ SGA I + ++ ++T+TA E +P+ S A +AV+L+ +K +
Sbjct: 296 QNESGAIISFGPSLVECEDRLVTITASEQNPESRYSPAQKAVVLVFSKSVEAGVEKGLDM 355
Query: 382 NDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDK-PKCADANDELV 440
+ + VT +L+V S +GC++GK G+I++E+RK T A++R+ DK PKC ND+LV
Sbjct: 356 GSKKESYVTAQLVVPSNQVGCLLGKGGAIVSEMRKATGANIRVIGNDKVPKCVSDNDQLV 415
Query: 441 EVVGEVGSVRDALVQIILRLRDDAL---KDRDGSRNPPVGADHIYSSG---TGISMPPLL 494
++ GE +V+ A+ RLRD+ ++ G+R+ + S G +S+
Sbjct: 416 QISGEFSNVQAAIYNATGRLRDNLFVSTQNSGGARS----LSSVLSGGKPTVAVSLSLNR 471
Query: 495 PSIP----PVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGL 550
S+P P G + R +G G+ S G L + GS ++ +
Sbjct: 472 HSLPGLQAPQTVAGINSRVTNGVSRGLTSQK-----GGLEL---VSGSKTAIVTNT---- 519
Query: 551 PPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQK 610
T+++ VP + +G V G+ GSNLA +R+ISGA + + + + DR +ISGTP++
Sbjct: 520 ----TVQIAVPDDVIGSVYGENGSNLARLRQISGAKVIVHEPRPGTSDRTIIISGTPDET 575
Query: 611 RAAENLIQAFIMA 623
RAA++L+QAFI+A
Sbjct: 576 RAAQSLLQAFILA 588
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 90/361 (24%), Positives = 161/361 (44%), Gaps = 34/361 (9%)
Query: 24 RINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRV 83
R++ D K ++ V +RI+C + +G+VIGK G ++ +++ E+ A + +DR+
Sbjct: 257 RVSALDPKALQQEVTFRIICSNDRVGAVIGKGGSIVRALQNESGAIISFGPSLVECEDRL 316
Query: 84 VTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHA-AIANAVANATDNDKKRKEKEEC 142
VTI + E N + AQ A++ V + ++ V D K++
Sbjct: 317 VTITA-----------SEQNPESRYSPAQKAVVLVFSKSVEAGVEKGLDMGSKKESYVTA 365
Query: 143 QILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESE 202
Q++VPS+Q ++GK GA + +R T +I+V D C + D V ISGE
Sbjct: 366 QLVVPSNQVGCLLGKGGAIVSEMRKATGANIRVIGND---KVPKCVSDNDQLVQISGEFS 422
Query: 203 AVKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSR 262
V+ A++ + + R+++ + T S+ + G L
Sbjct: 423 NVQAAIYNATGRL-----RDNLFVSTQNSGGARSL-----SSVLSGGKPTVAVSLSLNRH 472
Query: 263 SVPSILGAARVPDLQGYADTGNTWPVYST--GLSLVSGLVGASQSEELVIRVLCPFNKIG 320
S+P + V + G + + S GL LVSG A + V ++ P + IG
Sbjct: 473 SLPGLQAPQTVAGINSRVTNGVSRGLTSQKGGLELVSGSKTAIVTNTTV-QIAVPDDVIG 531
Query: 321 RVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTK 380
V G+ G + +RQ SGA++ V + + + I ++ +PD+ ++ A LLQ
Sbjct: 532 SVYGENGSNLARLRQISGAKVIVHEPRPGTSDRTIIISG--TPDETRA----AQSLLQAF 585
Query: 381 I 381
I
Sbjct: 586 I 586
>gi|413933966|gb|AFW68517.1| hypothetical protein ZEAMMB73_983755 [Zea mays]
Length = 428
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 151/459 (32%), Positives = 241/459 (52%), Gaps = 58/459 (12%)
Query: 3 DSGKRYRSQRDNDRDGKNQKRRINEKDEKGNEESV--IYRILCPDGVIGSVIGKSGKVIN 60
+S KR S D DGK ++ D + E + IYRILCP IGSV+G+ G ++
Sbjct: 10 NSKKRRHSNSD---DGKRKRLSSRHDDTSMSSEPIETIYRILCPAKKIGSVLGRGGDIVK 66
Query: 61 SIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKE------DVEVDDEFNDKEPLCAAQDA 114
++R+ET+A+++V D PGA +RV+ I+++ E + ++ D + +P C AQDA
Sbjct: 67 ALREETKAKIRVADSIPGADERVIIIFNYQNQPELTDEAAEKQISDGLGNMKPHCFAQDA 126
Query: 115 LLKVHAAI-ANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSI 173
LLK+H I A+ + + +D+ + +ILV +Q ++GK G+ I++LRS T I
Sbjct: 127 LLKIHDKIVADEIYDEVAHDES-SDDVTARILVQGNQVGCLLGKGGSIIQQLRSDTGAGI 185
Query: 174 KVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLE------ 227
+V +SE CA++ D V ISG V+KAL+ IS +++ +E+ PLE
Sbjct: 186 RVL---SSENLPQCALQSDELVQISGAPSLVRKALYEISTRLHQHPRKENRPLEQIIDAS 242
Query: 228 TTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTWP 287
T + P++ + + + P + P RS P +P
Sbjct: 243 TQRKHESPTLQHENPMLPHLHSHHPPPIPLLDPYRSGPQ-------------------YP 283
Query: 288 VYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDT- 346
V S++EE IR+LC IG VIGK G ++ + Q +GA+I V +
Sbjct: 284 V--------------SETEEFSIRILCASELIGSVIGKSGANVRRVEQQTGARIKVQEID 329
Query: 347 KDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKIN-DEDDDTVTIRLLVSSKVIGCIIG 405
KD E +I V++ E P + S +EA++LL K++ + + RL+V S +GCI+G
Sbjct: 330 KDASGERLIIVSSNEIPTEPISPTIEALILLHDKVSASSEKHHSSTRLVVPSNKVGCILG 389
Query: 406 KSGSIINEIRKRTKADVRI-SKGDKPKCADANDELVEVV 443
+ G +I E+R+RT A++R+ SK DKPK DELV+V
Sbjct: 390 EGGQVITEMRRRTGAEIRVYSKADKPKYLSFGDELVQVT 428
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 95/346 (27%), Positives = 158/346 (45%), Gaps = 58/346 (16%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
E + R+LCP KIG V+G+GG +K++R+ + A+I V D+ DE VI + ++ ++
Sbjct: 42 ETIYRILCPAKKIGSVLGRGGDIVKALREETKAKIRVADSIPGADERVIIIFNYQNQPEL 101
Query: 367 KSMAVE------------------AVLLLQTKI----------NDEDDDTVTIRLLVSSK 398
A E A+L + KI +DE D VT R+LV
Sbjct: 102 TDEAAEKQISDGLGNMKPHCFAQDALLKIHDKIVADEIYDEVAHDESSDDVTARILVQGN 161
Query: 399 VIGCIIGKSGSIINEIRKRTKADVRI-SKGDKPKCADANDELVEVVGEVGSVRDALVQII 457
+GC++GK GSII ++R T A +R+ S + P+CA +DELV++ G VR AL +I
Sbjct: 162 QVGCLLGKGGSIIQQLRSDTGAGIRVLSSENLPQCALQSDELVQISGAPSLVRKALYEIS 221
Query: 458 LRLRDDALKDRDGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGM 517
RL K+ N P+ + I + T P++ P+ + I +
Sbjct: 222 TRLHQHPRKE-----NRPL--EQIIDASTQRKHES--PTLQHENPMLPHLHSHHPPPIPL 272
Query: 518 LSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLA 577
L PY S Y ++ +L + +G VIGK+G+N+
Sbjct: 273 L---------------DPYRSGPQYPV----SETEEFSIRILCASELIGSVIGKSGANVR 313
Query: 578 NIRKISGATIEMSD-SKSSRGDRVALISGTPEQKRAAENLIQAFIM 622
+ + +GA I++ + K + G+R+ ++S I+A I+
Sbjct: 314 RVEQQTGARIKVQEIDKDASGERLIIVSSNEIPTEPISPTIEALIL 359
>gi|297792661|ref|XP_002864215.1| hypothetical protein ARALYDRAFT_495374 [Arabidopsis lyrata subsp.
lyrata]
gi|297310050|gb|EFH40474.1| hypothetical protein ARALYDRAFT_495374 [Arabidopsis lyrata subsp.
lyrata]
Length = 652
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 181/624 (29%), Positives = 300/624 (48%), Gaps = 81/624 (12%)
Query: 36 SVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKED 95
+ YRILC D G VIGKSG +I SIRQ T A + V + PG +R++ I + + D
Sbjct: 68 TTTYRILCHDAKAGGVIGKSGTIIKSIRQHTGAWINVHELVPGDVERIIEISDNRRRDPD 127
Query: 96 VEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEE------------CQ 143
+ AQ+AL VH I + + +E+E+ +
Sbjct: 128 GRMPS-------FSPAQEALFNVHDRILESEPQFGYGGAQPEEEEDYGGVRPGGGRVVTR 180
Query: 144 ILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEA 203
++V ++GK G I+++R +T+T I++ P++++ P C + V I GE A
Sbjct: 181 LVVSRMHVGCLLGKGGKIIEQMRIETKTHIRILPRESNLP--RCVSLSEEIVQIVGELSA 238
Query: 204 VKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRS 263
VK AL +S+ + + R+ + P D +P R
Sbjct: 239 VKNALLIVSSRLRESQHRDRSNFQGRSHS--------------PERQFAAAGDDYIPQRR 284
Query: 264 VPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGL-VGAS-QSEELVIRVLCPFNKIGR 321
S R P +G N S + VG + +EELV ++LCP +KI R
Sbjct: 285 QSS----DRFP--RGNYRNNNFSSRQSNYAEEAPAVPVGENVYTEELVFQILCPADKIVR 338
Query: 322 VIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKI 381
V+G+ G + ++ G + V D DE +IT+++ E+PDD A EA+L +QT+I
Sbjct: 339 VVGESQGILDLLQNEIGVDVRVSDPVTGSDEQIITISSEEAPDDPFFPAQEALLHIQTQI 398
Query: 382 ND---EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRI-SKGDKPKCADAND 437
D + D+ +T RLLVSS+ C+ GK+GS+ +EI + T V+I ++ + P+CA ND
Sbjct: 399 IDLLPDKDNLITTRLLVSSRDSVCLEGKAGSV-SEISRLTGTSVQILAREEIPRCASIND 457
Query: 438 ELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSGTGISMPPLLPSI 497
++++ G++ + RDALV++ L LR K+ PP +S TG
Sbjct: 458 VVIQITGDIRAARDALVELTLLLRSHMFKELSQKETPPAS-----TSTTG---------- 502
Query: 498 PPVGPLGYDQRADS-----------GSGIGMLSSSSLY-----GYGSLS-MGDSPY-GSM 539
P G G + A S GS + + +S++ G+GS++ G+S + +
Sbjct: 503 PLEGVAGVMEVASSNNTIQSREGLTGSNLKLQQTSTILPQFKEGFGSVAKAGESEHREEV 562
Query: 540 SSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDR 599
+S++ L TLEV++P V K++ K+ + LA I + SGA++ + + +
Sbjct: 563 PVTTSRMAVPLVTRSTLEVVLPEAVVPKLVTKSRNKLAQISEWSGASVTLVEDRPEETQN 622
Query: 600 VALISGTPEQKRAAENLIQAFIMA 623
+ ISGTPEQ A++L+Q FI++
Sbjct: 623 IIRISGTPEQAERAQSLLQGFILS 646
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 99/204 (48%), Gaps = 32/204 (15%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKE 94
E ++++ILCP I V+G+S +++ ++ E V+V DP G+ ++++TI S
Sbjct: 323 EELVFQILCPADKIVRVVGESQGILDLLQNEIGVDVRVSDPVTGSDEQIITISSE----- 377
Query: 95 DVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANI 154
E D +P AQ+ALL + I + + + + R +LV S S +
Sbjct: 378 --EAPD-----DPFFPAQEALLHIQTQIIDLLPDKDNLITTR-------LLVSSRDSVCL 423
Query: 155 IGKAGAT--IKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAIS 212
GKAG+ I RL T TS+++ A E CA D + I+G+ A + AL ++
Sbjct: 424 EGKAGSVSEISRL---TGTSVQIL---AREEIPRCASINDVVIQITGDIRAARDALVELT 477
Query: 213 AIMYKFSPREDIPLETTVREAPPS 236
++ R + E + +E PP+
Sbjct: 478 LLL-----RSHMFKELSQKETPPA 496
>gi|413955311|gb|AFW87960.1| hypothetical protein ZEAMMB73_110576 [Zea mays]
gi|413955312|gb|AFW87961.1| hypothetical protein ZEAMMB73_110576 [Zea mays]
Length = 543
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 171/513 (33%), Positives = 266/513 (51%), Gaps = 48/513 (9%)
Query: 5 GKRYRSQRDNDRDGKNQKRRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQ 64
GKRY D G ++R + + +YR LC IGS+IG+ G++ +R
Sbjct: 9 GKRYS---DYTETGGGKRRNPGDDTYAPGPDDTVYRYLCASRKIGSIIGRGGEIAKQLRT 65
Query: 65 ETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIAN 124
ET+A++++ + PG ++RV+TI+S + + D+ DK +C AQDAL +VH +A
Sbjct: 66 ETQAKIRIGESVPGCEERVITIFSSSRRTNTI---DDAEDK--VCPAQDALFRVHERLAT 120
Query: 125 AVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPT 184
+ ++ ++ + ++LVPS Q I+GK G I+ +RS+T I+V KD
Sbjct: 121 DESFGNEDSEEISPQVTVRLLVPSDQIGCILGKGGHIIQGIRSETGAQIRVLSKDH---I 177
Query: 185 HSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVP 244
+CA+ D + ISG+ VKKAL +S+ ++ + L +++ +
Sbjct: 178 PACAISGDELLQISGDMVVVKKALCQVSSRLHNNPSKSQHLLASSLTQP----------- 226
Query: 245 IYPPGGLYPNADPILPSRSVPSILGAARVPDLQGY-ADTGNTWPVYSTGLSLVSGLVGAS 303
YP + S + P + +P GY D WP SL S
Sbjct: 227 -------YPGGTHLGGSSAAPVVGITPVIPPYGGYKGDVAGDWP------SLYQPRRDES 273
Query: 304 QSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTK-DNRDECVITVTAIES 362
++E +R+LC +G VIGKGGG IK IRQ SGA I V + D D+C+ITV+A E
Sbjct: 274 SAKEFSLRLLCAAANVGGVIGKGGGIIKQIRQESGALIKVASSNSDPDDDCIITVSAKEF 333
Query: 363 PDDIKSMAVEAVLLLQTKINDEDD-----DTVTIRLLVSSKVIGCIIGKSGSIINEIRKR 417
+D S ++A + LQ + +++ D + T RLLVS+ IGC+IGK GSII EIR+
Sbjct: 334 FEDPVSPTIDAAVRLQLRCSEKSDSELAEQSYTTRLLVSTSRIGCLIGKGGSIITEIRRT 393
Query: 418 TKADVRI-SKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRN--P 474
++A++RI SK + PK A ++E+V++ G + R ALVQI RL+ + +R+GS + P
Sbjct: 394 SRANIRILSKENVPKVAAEDEEMVQISGGLDVARHALVQIATRLKANFF-EREGSLSAFP 452
Query: 475 PVGADHIYSSGTGISMPP--LLPSIPPVGPLGY 505
V H +G +S P L PVG Y
Sbjct: 453 SVIPYHPLPAGVSVSDEPKYLSRDTKPVGHYLY 485
>gi|413955310|gb|AFW87959.1| hypothetical protein ZEAMMB73_110576 [Zea mays]
Length = 528
Score = 212 bits (539), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 176/535 (32%), Positives = 273/535 (51%), Gaps = 50/535 (9%)
Query: 5 GKRYRSQRDNDRDGKNQKRRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQ 64
GKRY D G ++R + + +YR LC IGS+IG+ G++ +R
Sbjct: 9 GKRYS---DYTETGGGKRRNPGDDTYAPGPDDTVYRYLCASRKIGSIIGRGGEIAKQLRT 65
Query: 65 ETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIAN 124
ET+A++++ + PG ++RV+TI+S + + D+ DK +C AQDAL +VH +A
Sbjct: 66 ETQAKIRIGESVPGCEERVITIFSSSRRTNTI---DDAEDK--VCPAQDALFRVHERLAT 120
Query: 125 AVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPT 184
+ ++ ++ + ++LVPS Q I+GK G I+ +RS+T I+V KD
Sbjct: 121 DESFGNEDSEEISPQVTVRLLVPSDQIGCILGKGGHIIQGIRSETGAQIRVLSKDH---I 177
Query: 185 HSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVP 244
+CA+ D + ISG+ VKKAL +S+ ++ + L +++ +
Sbjct: 178 PACAISGDELLQISGDMVVVKKALCQVSSRLHNNPSKSQHLLASSLTQP----------- 226
Query: 245 IYPPGGLYPNADPILPSRSVPSILGAARVPDLQGY-ADTGNTWPVYSTGLSLVSGLVGAS 303
YP + S + P + +P GY D WP SL S
Sbjct: 227 -------YPGGTHLGGSSAAPVVGITPVIPPYGGYKGDVAGDWP------SLYQPRRDES 273
Query: 304 QSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTK-DNRDECVITVTAIES 362
++E +R+LC +G VIGKGGG IK IRQ SGA I V + D D+C+ITV+A E
Sbjct: 274 SAKEFSLRLLCAAANVGGVIGKGGGIIKQIRQESGALIKVASSNSDPDDDCIITVSAKEF 333
Query: 363 PDDIKSMAVEAVLLLQTKINDEDD-----DTVTIRLLVSSKVIGCIIGKSGSIINEIRKR 417
+D S ++A + LQ + +++ D + T RLLVS+ IGC+IGK GSII EIR+
Sbjct: 334 FEDPVSPTIDAAVRLQLRCSEKSDSELAEQSYTTRLLVSTSRIGCLIGKGGSIITEIRRT 393
Query: 418 TKADVRI-SKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRN--P 474
++A++RI SK + PK A ++E+V++ G + R ALVQI RL+ + +R+GS + P
Sbjct: 394 SRANIRILSKENVPKVAAEDEEMVQISGGLDVARHALVQIATRLKANFF-EREGSLSAFP 452
Query: 475 PVGADHIYSSGTGISMPP--LLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYG 527
V H +G +S P L PVG Y + M+ S S YG
Sbjct: 453 SVIPYHPLPAGVSVSDEPKYLSRDTKPVGHYLYSSAFRTSD--DMIPSDSYASYG 505
>gi|147853553|emb|CAN81693.1| hypothetical protein VITISV_009249 [Vitis vinifera]
Length = 543
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 181/522 (34%), Positives = 279/522 (53%), Gaps = 80/522 (15%)
Query: 3 DSGKRYRSQRDNDRDGKNQKRRI-NEKDEKG-NEESVIYRILCPDGVIGSVIGKSGKVIN 60
D GKR SQ D +G +++R ++K++ G E +YR LCP IGS+IG+ G +
Sbjct: 7 DYGKRSHSQSDYGGNGGSKRRNPGDDKEQHGIGVEDTVYRYLCPVRKIGSIIGRGGDIAK 66
Query: 61 SIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCA-AQDALLKVH 119
+R ET++ +++ + PG ++RVVTIYS E + F D L + AQDAL +VH
Sbjct: 67 QLRSETKSNIRIGETMPGCEERVVTIYS------SSEETNPFGDTGELVSPAQDALFRVH 120
Query: 120 AAIANAVANATDNDKKRKEKEE--CQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTP 177
I VA D++ +E ++ ++LVPS Q +IGK G I+ +RS+TR I++
Sbjct: 121 DRI---VAGELPADEEPEEAQQVTVRMLVPSDQIGCVIGKGGQVIQNIRSETRAQIRIL- 176
Query: 178 KDASEPTHSCAMEFDNFV------------LISGESEAVKKALFAISAIMYKFSPREDIP 225
KD P CA+ D + I G++ V+KAL +++ +++ R
Sbjct: 177 KDEHLPP--CALSSDELLQAFGNVFWALTSQIIGDASVVRKALHQLASRLHENPSRSQ-- 232
Query: 226 LETTVREAPPSIIIPSDVPIYPPGGLY--PNADPILPSRSVPSILGAARVPDLQGY-ADT 282
+++ S +Y GG + PN D P V ++G+ GY DT
Sbjct: 233 ----------HLLLSSSPNMYQSGGTFMTPNIDA--PLVGVAPLMGS-----YGGYKGDT 275
Query: 283 GNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQID 342
G+ W S S S ++E +R++CP IG VIGKGGG IK IRQ SGA I
Sbjct: 276 GD-W-----SHSYYSARRDESSAKEFSLRLVCPTGNIGGVIGKGGGIIKQIRQESGASIK 329
Query: 343 VDDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKINDE-----DDDTVTIRLLVSS 397
VD + D+C+I ++A E +D S ++A L LQ + +++ D VT RLLV S
Sbjct: 330 VDSSSAEGDDCIIFISAKEFFED-PSPTIDAALRLQPRCSEKAERESSDSVVTTRLLVPS 388
Query: 398 KVIGCIIGKSGSIINEIRKRTKADVRI-SKGDKPKCADANDELVEVVGEVGSVRDALVQI 456
IGC+IGK G+II+E+R T+A++RI SK + PK A +DE+V++ GE+ +AL+Q+
Sbjct: 389 SRIGCLIGKGGAIISEMRSVTRANIRILSKENLPKVASEDDEMVQITGELNVASNALLQV 448
Query: 457 ILRLRDDALKDRDGSRNPPVGADHIYSSGTGISMPPLLPSIP 498
LRL+ + L +R+G+ + A +PP LP +P
Sbjct: 449 TLRLKAN-LFEREGA----IAA-----------IPPTLPYLP 474
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 96/324 (29%), Positives = 153/324 (47%), Gaps = 57/324 (17%)
Query: 306 EELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTA------ 359
E+ V R LCP KIG +IG+GG K +R + + I + +T +E V+T+ +
Sbjct: 41 EDTVYRYLCPVRKIGSIIGRGGDIAKQLRSETKSNIRIGETMPGCEERVVTIYSSSEETN 100
Query: 360 -IESPDDIKSMAVEAVLLLQTKI---------NDEDDDTVTIRLLVSSKVIGCIIGKSGS 409
++ S A +A+ + +I E+ VT+R+LV S IGC+IGK G
Sbjct: 101 PFGDTGELVSPAQDALFRVHDRIVAGELPADEEPEEAQQVTVRMLVPSDQIGCVIGKGGQ 160
Query: 410 IINEIRKRTKADVRISKGDK-PKCADANDELV------------EVVGEVGSVRDALVQI 456
+I IR T+A +RI K + P CA ++DEL+ +++G+ VR AL Q+
Sbjct: 161 VIQNIRSETRAQIRILKDEHLPPCALSSDELLQAFGNVFWALTSQIIGDASVVRKALHQL 220
Query: 457 ILRLRDDALKDRD--GSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSG 514
RL ++ + + S +P ++Y SG P + + V PL
Sbjct: 221 ASRLHENPSRSQHLLLSSSP-----NMYQSGGTFMTPNIDAPLVGVAPL----------- 264
Query: 515 IGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGS 574
+ YG GD+ S S YS++ +L ++ P +G VIGK G
Sbjct: 265 --------MGSYGGYK-GDTGDWSHSYYSARRDESSAKEFSLRLVCPTGNIGGVIGKGGG 315
Query: 575 NLANIRKISGATIEMSDSKSSRGD 598
+ IR+ SGA+I++ DS S+ GD
Sbjct: 316 IIKQIRQESGASIKV-DSSSAEGD 338
>gi|224127654|ref|XP_002329331.1| predicted protein [Populus trichocarpa]
gi|222870785|gb|EEF07916.1| predicted protein [Populus trichocarpa]
Length = 563
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 180/508 (35%), Positives = 268/508 (52%), Gaps = 59/508 (11%)
Query: 2 GDSGKRYRSQRDN--DRDGKNQKRRINEKDEKGNEES----VIYRILCPDGVIGSVIGKS 55
G+ K ++ +N R G + R+ D G E S +YRILCP IG VIGK
Sbjct: 3 GNRRKYFKKPGNNLFKRKGVSSSRKGKWSDSHGEECSGDGDTVYRILCPSRKIGGVIGKG 62
Query: 56 GKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDD---------EFNDKE 106
G ++ ++R+ET++++ V D G+ +RV+ IYS DK ++D + E
Sbjct: 63 GNIVKALREETQSKITVADSVQGSDERVIIIYSS-SDKPPRKMDGDEGLPAGNGQQEAFE 121
Query: 107 PLCAAQDALLKVHAAIAN-----AVANATDNDKKRKEKEECQILVPSSQSANIIGKAGAT 161
P CAAQDALLKVH I +A+ DND ++LVP++ ++GK G
Sbjct: 122 PHCAAQDALLKVHDRIVEEDLFGGMASDDDNDNN---VVTARLLVPNNMVGCVLGKRGDV 178
Query: 162 IKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPR 221
I+RLRS+T +I+V P D SCAM+ D V ISG+ K+AL+ IS ++++ +PR
Sbjct: 179 IQRLRSETGANIRVLPADH---LPSCAMDTDELVQISGKPAVAKRALYEISILLHQ-NPR 234
Query: 222 ED----IPLETTVREAPPSIIIPSD--VPIYPPGGLYPNADPILPSR-SVPSILGAARVP 274
+D +P+ R P PSD + PPG +P+ P R S P + P
Sbjct: 235 KDKLPSVPMPYGGRTFHP----PSDSMANMLPPG------NPMWPHRNSTPHSM-----P 279
Query: 275 DLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIR 334
+ Y + + + G + V G S E +++LC KIG VIGKGG +K ++
Sbjct: 280 WMGEYGNHPSEF--GPGGFNGVPPGHGREPSAEFSMKILCSTGKIGGVIGKGGSNVKIVQ 337
Query: 335 QASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKINDED---DDTVTI 391
Q +GA I V+D +E I V+A E + +S ++A+L LQ D +
Sbjct: 338 QETGASIHVEDASAESEERAIRVSAFEGLWNPRSQTIDAILQLQ--DKTSDFSEKGMIIT 395
Query: 392 RLLVSSKVIGCIIGKSGSIINEIRKRTKADVRI-SKGDKPKCADANDELVEVVGEVGSVR 450
RLLV S +GCI+G+ G +INE+R+R +AD+R+ K DKPKCA ++ELV++ G G +
Sbjct: 396 RLLVPSSKVGCILGQGGQVINEMRRRLQADIRVYPKNDKPKCASDDEELVQISGNYGVAK 455
Query: 451 DALVQIILRLRDDALKDRDGSRNP-PVG 477
DAL +I RLR L+D + P P G
Sbjct: 456 DALAEIASRLRARTLRDANAGTEPGPAG 483
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 155/339 (45%), Gaps = 61/339 (17%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITV--------- 357
+ V R+LCP KIG VIGKGG +K++R+ + ++I V D+ DE VI +
Sbjct: 43 DTVYRILCPSRKIGGVIGKGGNIVKALREETQSKITVADSVQGSDERVIIIYSSSDKPPR 102
Query: 358 -----------TAIESPDDIKSMAVEAVLLLQTKI------------NDEDDDTVTIRLL 394
+ + A +A+L + +I +D D++ VT RLL
Sbjct: 103 KMDGDEGLPAGNGQQEAFEPHCAAQDALLKVHDRIVEEDLFGGMASDDDNDNNVVTARLL 162
Query: 395 VSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDK-PKCADANDELVEVVGEVGSVRDAL 453
V + ++GC++GK G +I +R T A++R+ D P CA DELV++ G+ + AL
Sbjct: 163 VPNNMVGCVLGKRGDVIQRLRSETGANIRVLPADHLPSCAMDTDELVQISGKPAVAKRAL 222
Query: 454 VQIILRLRDDALKDRDGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGS 513
+I + L + KD+ S P G + SM +LP P+ P R +
Sbjct: 223 YEISILLHQNPRKDKLPSVPMPYGGRTFHPPSD--SMANMLPPGNPMWP----HRNSTPH 276
Query: 514 GIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPP--------PLTLEVLVPANAV 565
+ + G+ P S + + G+PP ++++L +
Sbjct: 277 SMPWMG----------EYGNHP----SEFGPGGFNGVPPGHGREPSAEFSMKILCSTGKI 322
Query: 566 GKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALIS 604
G VIGK GSN+ +++ +GA+I + D+ + +R +S
Sbjct: 323 GGVIGKGGSNVKIVQQETGASIHVEDASAESEERAIRVS 361
>gi|449456987|ref|XP_004146230.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
gi|449517605|ref|XP_004165836.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 666
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 176/635 (27%), Positives = 295/635 (46%), Gaps = 80/635 (12%)
Query: 36 SVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKED 95
+ YRILC D G VIGKSG +I SIRQ T A + V + PG ++R++ I D
Sbjct: 59 TTTYRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEI-------SD 111
Query: 96 VEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEE-------------- 141
D AQ+AL +H I + + N ++E
Sbjct: 112 TRRRDPEGRMPSFSPAQEALFLIHERILESEMSPGFNGMGYGPEDEEDDYGGVRGGGGGG 171
Query: 142 ------CQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFV 195
+++V ++GK G I+++R +T+T I++ P+D + P C + V
Sbjct: 172 CGGRVATRLVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLP--RCISMSEEIV 229
Query: 196 LISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNA 255
I G++ AVKKA+ +S+ + + R+ ++ P ++P
Sbjct: 230 QIVGDTNAVKKAIAIVSSRLRESQHRDRSHFHGR---------------LHSPERIFPPE 274
Query: 256 DPILP--SRSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQS------EE 307
D +P +R +P + G P + GN + + + G + + E+
Sbjct: 275 DDYVPHNARRLP-MDGRPFRPRMSASNTRGNDYSSRQSNFMVEPGAAPVNDNMMPFYGED 333
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
LV ++LCP K+ VIG+ G I+ +R G I V D +E ++ +++ E PDD
Sbjct: 334 LVFKILCPIEKVDSVIGESNGIIELLRNDVGVDIKVSDPVTGSNEQILIISSDEGPDDEL 393
Query: 368 SMAVEAVLLLQTKIND---EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRI 424
A EA+L +QT+I D + ++ VT RLLV S IGC+ G+ GS++ E+++ T A+V I
Sbjct: 394 FPAQEALLHIQTRIVDLVPDKENIVTTRLLVPSSDIGCLEGRDGSLL-EMKRLTGANVHI 452
Query: 425 -SKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYS 483
+ D P DELV+++G++ + RDALV++ RLR+ K+ P D
Sbjct: 453 VPREDLPMFVSGADELVQIIGDIKAARDALVELTSRLRNCLYKE-------PFQKDASPQ 505
Query: 484 SGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYS 543
+M L + SG+ + ++ +G+ + GS +
Sbjct: 506 VSVQSTMVSLGLEESSSNNNAAAREVHSGNDSASTAFQNVQPFGTAQLLKETGGSSNETG 565
Query: 544 SK--------LYGGL---PPPL----TLEVLVPANAVGKVIGKAGSNLANIRKISGATIE 588
++ L GL P PL TLEV++P AV K+I K+ + LA I ++SGA +
Sbjct: 566 TQNENDRREDLPSGLNRIPVPLVTRSTLEVVIPEPAVPKLITKSKNKLAQISELSGANVT 625
Query: 589 MSDSKSSRGDRVALISGTPEQKRAAENLIQAFIMA 623
+ + + ++ ISGTPEQ A++L+Q FI++
Sbjct: 626 LVEDRPDVTQKIIQISGTPEQAERAQSLLQGFILS 660
>gi|115453243|ref|NP_001050222.1| Os03g0376800 [Oryza sativa Japonica Group]
gi|18921324|gb|AAL82529.1|AC084766_15 putative nucleic acid binding protein [Oryza sativa Japonica Group]
gi|108708431|gb|ABF96226.1| KH domain-containing protein, putative, expressed [Oryza sativa
Japonica Group]
gi|108708432|gb|ABF96227.1| KH domain-containing protein, putative, expressed [Oryza sativa
Japonica Group]
gi|113548693|dbj|BAF12136.1| Os03g0376800 [Oryza sativa Japonica Group]
gi|125586438|gb|EAZ27102.1| hypothetical protein OsJ_11034 [Oryza sativa Japonica Group]
gi|215686826|dbj|BAG89676.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215695345|dbj|BAG90536.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215704897|dbj|BAG94925.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 542
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 177/552 (32%), Positives = 281/552 (50%), Gaps = 89/552 (16%)
Query: 5 GKRYRSQRDNDRDGKNQKRRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQ 64
GKR+ +N G ++R + + +YR LCP IGS+IG+ G++ +R
Sbjct: 11 GKRHSDYAEN---GGGKRRNPGDDTYAPGPDDTVYRYLCPSRKIGSIIGRGGEIAKQMRA 67
Query: 65 ETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIAN 124
+T+A++++ + G +RV+TI+S ++ + VD E + +C AQDAL +VH +
Sbjct: 68 DTQAKIRIGESVSGCDERVITIFSSSRETNTL-VDAE----DKVCPAQDALFRVHEKL-- 120
Query: 125 AVANATDNDKKRKEKEE------CQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPK 178
+ D+D +E +E ++LVPS Q IIGK G I+ +RS T I+V
Sbjct: 121 ----SIDDDIGNEESDEGLAQVTVRLLVPSDQIGCIIGKGGHIIQGIRSDTGAHIRVL-- 174
Query: 179 DASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSII 238
++E +CA+ D + ISG+S V+KAL +S+ ++ R L +++ +
Sbjct: 175 -SNENLPACAISGDELLQISGDSTVVRKALLQVSSRLHDNPSRSQHLLASSMTQP----- 228
Query: 239 IPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQGY-ADTGNTWPVYSTGLSLVS 297
YP + S + P + + GY D WP S+
Sbjct: 229 -------------YPVGSHLGSSSTAPVVGITPLISSYGGYKGDVAGDWP------SIYQ 269
Query: 298 GLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITV 357
S ++E +R+LC + +G VIGKGGG IK IRQ SGA I V D+ + D+C+ITV
Sbjct: 270 PRREESSAKEFSLRLLCAASNVGGVIGKGGGIIKQIRQESGAFIKV-DSSNTEDDCIITV 328
Query: 358 TAIESPDDIKSMAVEAVLLLQTKINDEDD-----DTVTIRLLVSSKVIGCIIGKSGSIIN 412
+A E +D S + A + LQ + +++ D + T RLLVS+ IGC+IGK GSII
Sbjct: 329 SAKEFFEDPVSPTINAAVHLQPRCSEKTDPESAIPSYTTRLLVSTSRIGCLIGKGGSIIT 388
Query: 413 EIRKRTKADVRI-SKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGS 471
EIR+ ++A++RI SK + PK A ++E+V++ G++ VR AL+QI RL+ + +R+G+
Sbjct: 389 EIRRTSRANIRILSKENVPKVAAEDEEMVQISGDLDVVRHALLQITTRLKANFF-EREGA 447
Query: 472 RNPPVGADHIYSSGTGISMPPLLPSIP-PVG-------------PLGYDQRADSG----S 513
+ PP++P P PVG PLG+D SG
Sbjct: 448 LS---------------GFPPVIPYHPLPVGVSEGPKYLGRDTKPLGHDYPYSSGYRGSD 492
Query: 514 GIGMLSSSSLYG 525
IG + S + YG
Sbjct: 493 DIGPIDSYASYG 504
>gi|8809595|dbj|BAA97146.1| RNA-binding protein-like [Arabidopsis thaliana]
Length = 660
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 182/623 (29%), Positives = 304/623 (48%), Gaps = 76/623 (12%)
Query: 36 SVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKED 95
+ YRILC D G VIGKSG +I SIRQ T A + V + PG +R++ I + + D
Sbjct: 67 TTTYRILCHDAKAGGVIGKSGTIIKSIRQHTGAWINVHELVPGDAERIIEISDNRRRDPD 126
Query: 96 VEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEE------------CQ 143
+ AQ+AL VH I + A +E+E+ +
Sbjct: 127 GRMPS-------FSPAQEALFSVHDRILESEAQFGYGGPPPEEEEDYGGVRPGGGRVVTR 179
Query: 144 ILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEA 203
++V ++GK G I+++R +T+T I++ P++++ P C + V I GE A
Sbjct: 180 LVVSRMHVGCLLGKGGKIIEQMRIETKTHIRILPRESNLP--RCVSLSEEIVQIVGELNA 237
Query: 204 VKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRS 263
VK AL +S+ + + R+ + S D Y P ++D P +
Sbjct: 238 VKNALAIVSSRLRESQHRDRSNFQGRSHSPERSFAAAGD--DYMPQLRRQSSDR-FPRGN 294
Query: 264 VPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVI 323
+ ++R + YA+ PV G ++ S EELV ++LCP +KI RV+
Sbjct: 295 FRNNNFSSRQSN---YAEEAPAVPV---GENVYS--------EELVFQILCPADKIVRVV 340
Query: 324 GKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKIND 383
G+ G I ++ G + V D DE +IT+++ E+PDD A EA+L +QT+I D
Sbjct: 341 GESQGIIDLLQNEIGVDVRVSDPVAGSDEQIITISSEEAPDDPFFPAQEALLHIQTQIID 400
Query: 384 ---EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRI-SKGDKPKCADANDEL 439
+ D+ +T RLLV S+ C+ GK+GS ++EI + T V+I ++ + P+CA ND +
Sbjct: 401 LIPDKDNLITTRLLVPSRDSICLEGKAGS-VSEISRLTGTSVQILAREEIPRCASINDVV 459
Query: 440 VEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSGTGISMPPLLPSIPP 499
+++ GE+ + R+ALV++ L LR K+ PP +S TG P
Sbjct: 460 IQITGEIRAAREALVELTLLLRSHMFKELSQKETPPAS-----TSTTG----------PL 504
Query: 500 VGPLGYDQRADSG-----------SGIGMLSSSSLY-----GYGSLS-MGDSPY-GSMSS 541
G G + A S S + + S++ G+GS++ G+S + +
Sbjct: 505 EGVAGVMEVASSNNTIQSREGPTSSNLNLQQVSTILPQFKEGFGSVAKAGESEHREEVPV 564
Query: 542 YSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVA 601
+S++ L TLEV++P V K++ K+ + LA I + SGA++ + + + +
Sbjct: 565 TTSRMAVPLVTRSTLEVVLPEAVVPKLVTKSRNKLAQISEWSGASVTIVEDRPEETQNII 624
Query: 602 LISGTPEQKRAAENLIQAFIMAT 624
ISGTPEQ A++L+Q FI+++
Sbjct: 625 RISGTPEQAERAQSLLQGFILSS 647
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 111/238 (46%), Gaps = 40/238 (16%)
Query: 9 RSQRDNDRDGKNQKRRINEKDE--------KGNEESVIYRILCPDGVIGSVIGKSGKVIN 60
R R N R+ R+ N +E E ++++ILCP I V+G+S +I+
Sbjct: 289 RFPRGNFRNNNFSSRQSNYAEEAPAVPVGENVYSEELVFQILCPADKIVRVVGESQGIID 348
Query: 61 SIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHA 120
++ E V+V DP G+ ++++TI S E D +P AQ+ALL +
Sbjct: 349 LLQNEIGVDVRVSDPVAGSDEQIITISSE-------EAPD-----DPFFPAQEALLHIQT 396
Query: 121 AIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGAT--IKRLRSKTRTSIKVTPK 178
I + + + + R +LVPS S + GKAG+ I RL T TS+++
Sbjct: 397 QIIDLIPDKDNLITTR-------LLVPSRDSICLEGKAGSVSEISRL---TGTSVQIL-- 444
Query: 179 DASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPS 236
A E CA D + I+GE A ++AL ++ ++ R + E + +E PP+
Sbjct: 445 -AREEIPRCASINDVVIQITGEIRAAREALVELTLLL-----RSHMFKELSQKETPPA 496
>gi|30696273|ref|NP_200118.3| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|17065220|gb|AAL32764.1| RNA-binding protein-like [Arabidopsis thaliana]
gi|30725478|gb|AAP37761.1| At5g53060 [Arabidopsis thaliana]
gi|332008915|gb|AED96298.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 652
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 182/622 (29%), Positives = 303/622 (48%), Gaps = 76/622 (12%)
Query: 36 SVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKED 95
+ YRILC D G VIGKSG +I SIRQ T A + V + PG +R++ I + + D
Sbjct: 67 TTTYRILCHDAKAGGVIGKSGTIIKSIRQHTGAWINVHELVPGDAERIIEISDNRRRDPD 126
Query: 96 VEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEE------------CQ 143
+ AQ+AL VH I + A +E+E+ +
Sbjct: 127 GRMPS-------FSPAQEALFSVHDRILESEAQFGYGGPPPEEEEDYGGVRPGGGRVVTR 179
Query: 144 ILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEA 203
++V ++GK G I+++R +T+T I++ P++++ P C + V I GE A
Sbjct: 180 LVVSRMHVGCLLGKGGKIIEQMRIETKTHIRILPRESNLP--RCVSLSEEIVQIVGELNA 237
Query: 204 VKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRS 263
VK AL +S+ + + R+ + S D Y P ++D P +
Sbjct: 238 VKNALAIVSSRLRESQHRDRSNFQGRSHSPERSFAAAGD--DYMPQLRRQSSDR-FPRGN 294
Query: 264 VPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVI 323
+ ++R + YA+ PV G ++ S EELV ++LCP +KI RV+
Sbjct: 295 FRNNNFSSRQSN---YAEEAPAVPV---GENVYS--------EELVFQILCPADKIVRVV 340
Query: 324 GKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKIND 383
G+ G I ++ G + V D DE +IT+++ E+PDD A EA+L +QT+I D
Sbjct: 341 GESQGIIDLLQNEIGVDVRVSDPVAGSDEQIITISSEEAPDDPFFPAQEALLHIQTQIID 400
Query: 384 ---EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRI-SKGDKPKCADANDEL 439
+ D+ +T RLLV S+ C+ GK+GS ++EI + T V+I ++ + P+CA ND +
Sbjct: 401 LIPDKDNLITTRLLVPSRDSICLEGKAGS-VSEISRLTGTSVQILAREEIPRCASINDVV 459
Query: 440 VEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSGTGISMPPLLPSIPP 499
+++ GE+ + R+ALV++ L LR K+ PP +S TG P
Sbjct: 460 IQITGEIRAAREALVELTLLLRSHMFKELSQKETPPAS-----TSTTG----------PL 504
Query: 500 VGPLGYDQRADSG-----------SGIGMLSSSSLY-----GYGSLS-MGDSPY-GSMSS 541
G G + A S S + + S++ G+GS++ G+S + +
Sbjct: 505 EGVAGVMEVASSNNTIQSREGPTSSNLNLQQVSTILPQFKEGFGSVAKAGESEHREEVPV 564
Query: 542 YSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVA 601
+S++ L TLEV++P V K++ K+ + LA I + SGA++ + + + +
Sbjct: 565 TTSRMAVPLVTRSTLEVVLPEAVVPKLVTKSRNKLAQISEWSGASVTIVEDRPEETQNII 624
Query: 602 LISGTPEQKRAAENLIQAFIMA 623
ISGTPEQ A++L+Q FI++
Sbjct: 625 RISGTPEQAERAQSLLQGFILS 646
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 101/204 (49%), Gaps = 32/204 (15%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKE 94
E ++++ILCP I V+G+S +I+ ++ E V+V DP G+ ++++TI S
Sbjct: 323 EELVFQILCPADKIVRVVGESQGIIDLLQNEIGVDVRVSDPVAGSDEQIITISSE----- 377
Query: 95 DVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANI 154
E D +P AQ+ALL + I + + + + R +LVPS S +
Sbjct: 378 --EAPD-----DPFFPAQEALLHIQTQIIDLIPDKDNLITTR-------LLVPSRDSICL 423
Query: 155 IGKAGAT--IKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAIS 212
GKAG+ I RL T TS+++ A E CA D + I+GE A ++AL ++
Sbjct: 424 EGKAGSVSEISRL---TGTSVQIL---AREEIPRCASINDVVIQITGEIRAAREALVELT 477
Query: 213 AIMYKFSPREDIPLETTVREAPPS 236
++ R + E + +E PP+
Sbjct: 478 LLL-----RSHMFKELSQKETPPA 496
>gi|125544080|gb|EAY90219.1| hypothetical protein OsI_11787 [Oryza sativa Indica Group]
Length = 542
Score = 208 bits (529), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 172/535 (32%), Positives = 274/535 (51%), Gaps = 85/535 (15%)
Query: 5 GKRYRSQRDNDRDGKNQKRRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQ 64
GKR+ +N G ++R + + +YR LCP IGS+IG+ G++ +R
Sbjct: 11 GKRHSDYAEN---GGGKRRNPGDDTYAPGPDDTVYRYLCPSRKIGSIIGRGGEIAKQMRA 67
Query: 65 ETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIAN 124
+T+A++++ + G +RV+TI+S ++ + VD E + +C AQDAL +VH +
Sbjct: 68 DTQAKIRIGESVSGCDERVITIFSSSRETNTL-VDAE----DKVCPAQDALFRVHEKL-- 120
Query: 125 AVANATDNDKKRKEKEE------CQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPK 178
+ D+D +E +E ++LVPS Q IIGK G I+ +RS T I+V
Sbjct: 121 ----SIDDDIGNEESDEGLAQVTVRLLVPSDQIGCIIGKGGHIIQGIRSDTGAHIRVL-- 174
Query: 179 DASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSII 238
++E +CA+ D + ISG+S V+KAL +S+ ++ R L +++ +
Sbjct: 175 -SNENLPACAISGDELLQISGDSTVVRKALLQVSSRLHDNPSRSQHLLASSMTQP----- 228
Query: 239 IPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQGY-ADTGNTWPVYSTGLSLVS 297
YP + S + P + + GY D WP S+
Sbjct: 229 -------------YPVGSHLGSSSTAPVVGITPLISSYGGYKGDVAGDWP------SIYQ 269
Query: 298 GLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITV 357
S ++E +R+LC + +G VIGKGGG IK IRQ SGA I V D+ + D+C+ITV
Sbjct: 270 PRREESSAKEFSLRLLCAASNVGGVIGKGGGIIKQIRQESGAFIKV-DSSNTEDDCIITV 328
Query: 358 TAIESPDDIKSMAVEAVLLLQTKINDEDD-----DTVTIRLLVSSKVIGCIIGKSGSIIN 412
+A E +D S + A + LQ + +++ D + T RLLVS+ IGC+IGK GSII
Sbjct: 329 SAKEFFEDPVSPTINAAVHLQPRCSEKTDPESAIPSYTTRLLVSTSRIGCLIGKGGSIIT 388
Query: 413 EIRKRTKADVRI-SKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGS 471
EIR+ ++A++RI SK + PK A ++E+V++ G++ VR AL+QI RL+ + +R+G+
Sbjct: 389 EIRRTSRANIRILSKENVPKVAAEDEEMVQISGDLDVVRHALLQITTRLKANFF-EREGA 447
Query: 472 RNPPVGADHIYSSGTGISMPPLLPSIP-PVG-------------PLGYDQRADSG 512
+ PP++P P PVG PLG+D SG
Sbjct: 448 LS---------------GFPPVIPYHPLPVGVSEGPKYLGRDTKPLGHDYPYSSG 487
>gi|224118310|ref|XP_002317787.1| predicted protein [Populus trichocarpa]
gi|222858460|gb|EEE96007.1| predicted protein [Populus trichocarpa]
Length = 655
Score = 208 bits (529), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 183/618 (29%), Positives = 292/618 (47%), Gaps = 61/618 (9%)
Query: 39 YRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEV 98
YRILC D G VIGKSG +I SIRQ T A + V + PG ++R++ I D
Sbjct: 62 YRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEI-------SDTRR 114
Query: 99 DDEFNDKEPLCAAQDALLKVH----------AAIANAVANATDNDK--KRKEKEECQILV 146
D AQ+AL +H +++ V +++ + + +++V
Sbjct: 115 RDPEGRMPSFSPAQEALFLIHDRILENDLQYGVVSSGVGGLEEDEYVGRGGNRVATRLVV 174
Query: 147 PSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKK 206
++GK G I+++R +T+T I++ P+D + P C + V + G+ AVK
Sbjct: 175 SRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHTLP--RCVSMSEEIVQVVGDVSAVKN 232
Query: 207 ALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPS 266
A+ IS+ + + R+ V P + D P+ + S P
Sbjct: 233 AVAIISSRLRESQHRDRSHFHGRVHS--PERLFDDD--------YAPHMNTRRSSMDGPP 282
Query: 267 ILGAARVPDLQGYADTGNTWPVYSTGLSLVSG---LVGASQS---EELVIRVLCPFNKIG 320
G+ RVP G N + ++G + +G + ++Q E+LV R+LCP +K+
Sbjct: 283 SFGS-RVP---GSNYRNNNYSSRASGFAADAGADPIADSAQPFYVEDLVFRILCPIDKLN 338
Query: 321 RVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTK 380
RV+G+ G + ++ G + V D DE +IT+ + E PDD A EA+L +QT+
Sbjct: 339 RVVGESDGIVDLLQNEIGVDVKVADPVSGSDEQIITIFSEEGPDDELFPAQEALLHIQTR 398
Query: 381 IND---EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDK-PKCADAN 436
I D ++D T RLLV S IGC+ G+ S ++EI + T A + I +K P
Sbjct: 399 IVDLVPDNDHITTTRLLVRSSEIGCLEGRDAS-LSEIERLTGATIEILPKEKLPSYLSGI 457
Query: 437 DELVEVVGEVGSVRDALVQIILRLRDDALKD-RDGSRNPPVGADHIYSSGTGISMPPLLP 495
DE+V++ GE+ + RDALV++ RLR KD + PPV A G M P
Sbjct: 458 DEIVQIEGEIRAARDALVEVTSRLRSYIYKDVFEKDLPPPVSA-----PGLAGGMQAASP 512
Query: 496 SIPPV--GPLGYDQRA---DSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGL 550
S P GP+G D A + S S G ++ + +
Sbjct: 513 SPTPAREGPIGGDPPASYQNVQSAATPQPSKDARGSSVEAVKQNESERREELPVTTMNRI 572
Query: 551 PPPL----TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGT 606
P L TLEV++P AV K+I K+ + LA I ++SGA + + + + +++ ISGT
Sbjct: 573 PVTLVTRSTLEVVIPEPAVPKLITKSKNKLAQISELSGANVTLVEDRPDVKEKIIKISGT 632
Query: 607 PEQKRAAENLIQAFIMAT 624
PEQ A++L+Q FI++T
Sbjct: 633 PEQAERAQSLLQGFILST 650
>gi|54290950|dbj|BAD61631.1| putative HEN4 [Oryza sativa Japonica Group]
Length = 662
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 183/624 (29%), Positives = 290/624 (46%), Gaps = 95/624 (15%)
Query: 39 YRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEV 98
+RILCP V G I +R +T A V + P+PG RV+ + + D
Sbjct: 87 FRILCPQS---KVYGFPPSFIAKVRDDTNAVVTIHLPYPGDAVRVIETSDGARREAD--- 140
Query: 99 DDEFNDKEP-LCAAQDALLKVHAAIANAVANATDND---------KKRKEKEECQILVPS 148
+ P AQ+ALL VH I + D D + + K +++VP
Sbjct: 141 -----GRPPSFSPAQEALLMVHRRILETEPDDGDEDGEYGPRAKDARDRGKVTTRLIVPR 195
Query: 149 SQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKAL 208
++GK G I+++R++T+T I++ P+D P C + V + GE VKKA+
Sbjct: 196 LHVGCLLGKGGKIIEQMRAETKTHIRILPRDQHTP--RCVSLSEEVVQVVGEGNCVKKAV 253
Query: 209 FAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSIL 268
IS + + R+ P R P P + Y GG ++ +P+
Sbjct: 254 AIISDRLKESLHRDRGPFRG--RMNSPEHRFPQEDEYY--GG----------AQQMPAYE 299
Query: 269 GAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQS---EELVIRVLCPFNKIGRVIGK 325
PD Q +T P Y G + ++++ R+LCP +K+ ++G
Sbjct: 300 EPYGRPD-QIRNNTSMELPGYE--FDSNGGKINDHTEILFDDIIFRILCPSDKVNSLVGT 356
Query: 326 GGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKIND-- 383
G ++ +++ G I + D+ D DE +I +T+ E PD A EA+L LQT I D
Sbjct: 357 RDGLLEMLQEDVGVDIRLTDSLDGSDERIIIITSREGPDHELFPAQEALLHLQTHIVDLG 416
Query: 384 -EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRI-SKGDKPKCADANDELVE 441
+ D+ +T RLLV S I C G+ GS+ ++I+++T A+V+I + P CA +DEL++
Sbjct: 417 PDKDNIITTRLLVPSSEIACFEGRDGSL-SDIQRQTSANVQILPRQALPSCALESDELIQ 475
Query: 442 VVGEVGSVRDALVQIILRLRDDALKD-----------RDGSRNPPVGADHIYSSGTGISM 490
+VGE+ + RDALVQI +LR ++ GS +P G+ G+ I M
Sbjct: 476 IVGEIRAARDALVQITAKLRSYFYREIPGPNQLGNITVHGSISPAKGSPRGPYQGSDIPM 535
Query: 491 PPLLPSIPPVGPLGYDQ-------RADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYS 543
P Y Q DSG G M S G + M +
Sbjct: 536 P------------SYQQAQHVPASWKDSGGGANM----------SFEQGSNINDDMRQSA 573
Query: 544 SKLYGGLPPPL----TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDR 599
+K + PL TLEV++P +AV + +AGS LA I ++SGAT+ ++D + ++
Sbjct: 574 AKRFAV---PLVTRSTLEVVIPKSAVASLTMRAGSKLAQISEMSGATVTLADERPDAIEK 630
Query: 600 VALISGTPEQKRAAENLIQAFIMA 623
V ISGTPEQ A++L+Q FI++
Sbjct: 631 VVRISGTPEQADKAQSLLQGFILS 654
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 83/364 (22%), Positives = 160/364 (43%), Gaps = 58/364 (15%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKE 94
+ +I+RILCP + S++G ++ ++++ +++ D G+ +R++ I S
Sbjct: 337 DDIIFRILCPSDKVNSLVGTRDGLLEMLQEDVGVDIRLTDSLDGSDERIIIITSR----- 391
Query: 95 DVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANI 154
E D E L AQ+ALL + I + + + R +LVPSS+ A
Sbjct: 392 ------EGPDHE-LFPAQEALLHLQTHIVDLGPDKDNIITTR-------LLVPSSEIACF 437
Query: 155 IGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAI 214
G+ G ++ ++ +T ++++ P+ A SCA+E D + I GE A + AL I+A
Sbjct: 438 EGRDG-SLSDIQRQTSANVQILPRQA---LPSCALESDELIQIVGEIRAARDALVQITAK 493
Query: 215 MYKFSPRE--------DIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPS 266
+ + RE +I + ++ A S P G Y +D +P +PS
Sbjct: 494 LRSYFYREIPGPNQLGNITVHGSISPAKGS-----------PRGPYQGSD--IP---MPS 537
Query: 267 ILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVI--------RVLCPFNK 318
A VP + D+G + S ++ + S ++ + V+ P +
Sbjct: 538 YQQAQHVP--ASWKDSGGGANMSFEQGSNINDDMRQSAAKRFAVPLVTRSTLEVVIPKSA 595
Query: 319 IGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAI-ESPDDIKSMAVEAVLLL 377
+ + + G + I + SGA + + D + + E V+ ++ E D +S+ +L +
Sbjct: 596 VASLTMRAGSKLAQISEMSGATVTLADERPDAIEKVVRISGTPEQADKAQSLLQGFILSI 655
Query: 378 QTKI 381
Q I
Sbjct: 656 QDDI 659
>gi|125555220|gb|EAZ00826.1| hypothetical protein OsI_22856 [Oryza sativa Indica Group]
Length = 693
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 185/624 (29%), Positives = 290/624 (46%), Gaps = 93/624 (14%)
Query: 39 YRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEV 98
+RILCP V G I +R +T A V + P+PG RV+ D E
Sbjct: 87 FRILCPQS---KVYGFPPSFIAKVRDDTNAVVTIHLPYPGDAVRVI----ETSDGARREA 139
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDND---------KKRKEKEECQILVPSS 149
D P AQ+ALL VH I + D D + + K +++VP
Sbjct: 140 DGRPPSFSP---AQEALLMVHRRILETEPDDGDEDGEYGPRAKDARDRGKVTTRLIVPRL 196
Query: 150 QSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALF 209
++GK G I+++R++T+T I++ P+D P C + V + GE VKKA+
Sbjct: 197 HVGCLLGKGGKIIEQMRAETKTHIRILPRDQHTP--RCVSLSEEVVQVVGEGNCVKKAVA 254
Query: 210 AISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILG 269
IS + + R+ P R P P + Y GG ++ +P+
Sbjct: 255 IISDRLKESLHRDRGPFRG--RMNSPEHRFPQEDEYY--GG----------AQQMPAYEE 300
Query: 270 AARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQS---EELVIRVLCPFNKIGRVIGKG 326
PD Q +T P Y G + ++++ R+LCP +K+ ++G
Sbjct: 301 PYGRPD-QIRNNTSMEPPGYE--FDSNGGKINDHTEILFDDIIFRILCPSDKVNSLVGTR 357
Query: 327 GGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKIND--- 383
G ++ +++ G I + D+ D DE +I +T+ E PD A EA+L LQT I D
Sbjct: 358 DGLLEMLQEDVGVDIRLTDSLDGSDERIIIITSREGPDHELFPAQEALLHLQTHIVDLGP 417
Query: 384 EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRI-SKGDKPKCADANDELVEV 442
+ D+ +T RLLV S I C G+ GS+ ++I+++T A+V+I + P CA +DEL+++
Sbjct: 418 DKDNIITTRLLVPSSEIACFEGRDGSL-SDIQRQTSANVQILPRQALPSCALESDELIQI 476
Query: 443 VGEVGSVRDALVQIILRLRDDALKD-----------RDGSRNPPVGADHIYSSGTGISMP 491
VGE+ + RDALVQI +LR ++ GS +P G+ G+ I MP
Sbjct: 477 VGEIRAARDALVQITAKLRSYFYREIPGPNQLGNITVHGSISPAKGSPRGPYQGSDIPMP 536
Query: 492 PLLPSIPPVGPLGYDQ-------RADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSS 544
Y Q DSG G M S G + M ++
Sbjct: 537 ------------SYQQAQHVPASWKDSGGGANM----------SFEQGSNINDDMRQSAA 574
Query: 545 KLYGGLPPPL----TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRV 600
K + PL TLEV++P +AV + +AGS LA I ++SGAT+ ++D + ++V
Sbjct: 575 KRFAV---PLVTRSTLEVVIPKSAVASLTMRAGSKLAQISEMSGATVTLADERPDAIEKV 631
Query: 601 ALISGTPEQKRAAENLIQAFIMAT 624
ISGTPEQ A++L+Q FI+++
Sbjct: 632 VRISGTPEQADKAQSLLQGFILSS 655
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 81/366 (22%), Positives = 162/366 (44%), Gaps = 58/366 (15%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKE 94
+ +I+RILCP + S++G ++ ++++ +++ D G+ +R++ I S
Sbjct: 337 DDIIFRILCPSDKVNSLVGTRDGLLEMLQEDVGVDIRLTDSLDGSDERIIIITSR----- 391
Query: 95 DVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANI 154
E D E L AQ+ALL + I + + + R +LVPSS+ A
Sbjct: 392 ------EGPDHE-LFPAQEALLHLQTHIVDLGPDKDNIITTR-------LLVPSSEIACF 437
Query: 155 IGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAI 214
G+ G ++ ++ +T ++++ P+ A SCA+E D + I GE A + AL I+A
Sbjct: 438 EGRDG-SLSDIQRQTSANVQILPRQA---LPSCALESDELIQIVGEIRAARDALVQITAK 493
Query: 215 MYKFSPRE--------DIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPS 266
+ + RE +I + ++ A S P G Y +D +P +PS
Sbjct: 494 LRSYFYREIPGPNQLGNITVHGSISPAKGS-----------PRGPYQGSD--IP---MPS 537
Query: 267 ILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVI--------RVLCPFNK 318
A VP + D+G + S ++ + S ++ + V+ P +
Sbjct: 538 YQQAQHVP--ASWKDSGGGANMSFEQGSNINDDMRQSAAKRFAVPLVTRSTLEVVIPKSA 595
Query: 319 IGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQ 378
+ + + G + I + SGA + + D + + E V+ ++ D K+ ++ +L
Sbjct: 596 VASLTMRAGSKLAQISEMSGATVTLADERPDAIEKVVRISGTPEQAD-KAQSLLQGFILS 654
Query: 379 TKINDE 384
+K+ ++
Sbjct: 655 SKVKEK 660
>gi|224135123|ref|XP_002321989.1| predicted protein [Populus trichocarpa]
gi|222868985|gb|EEF06116.1| predicted protein [Populus trichocarpa]
Length = 685
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 180/633 (28%), Positives = 288/633 (45%), Gaps = 89/633 (14%)
Query: 39 YRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEV 98
YRILC D G VIGKSG +I SIRQ T A + V + PG ++R++ I D
Sbjct: 88 YRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEI-------SDTRR 140
Query: 99 DDEFNDKEPLCAAQDALLKVH---------AAIANAVANATDNDK---KRKEKEECQILV 146
D AQ+AL +H + ++ A + D+ + + +++V
Sbjct: 141 RDPEGRMPSFSPAQEALFLIHDRILENDLQYGVVSSGAGGFEEDEYVGRGGNRVATRLVV 200
Query: 147 PSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKK 206
++GK G I+++R +T+T I++ P+D + P C + V + G+ AVK
Sbjct: 201 SRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHTLP--RCVSVSEEIVQVIGDVNAVKN 258
Query: 207 ALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPS 266
A+ IS+ + + R+ V+ P + D P+ + S P
Sbjct: 259 AVAIISSRLRESQHRDRSHFHGRVQS--PERFLDDD--------YVPHMNTRRSSMDGPP 308
Query: 267 ILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQS------EELVIRVLCPFNKIG 320
G+ L G N + + G + +G + S E+LV R+LCP +K+
Sbjct: 309 SFGSR----LSGPNYRNNNYSSRAPGFPVDAGADPNADSAQPFYVEDLVFRILCPIDKVN 364
Query: 321 RVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTK 380
RV+G+ G + ++ G + V D DE +IT+ + E PDD A EA+L +QT+
Sbjct: 365 RVVGESDGLVDLLQNEIGVDVKVADPVSGSDEQIITICSEEGPDDELFPAQEALLHIQTR 424
Query: 381 IND---EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRI-SKGDKPKCADAN 436
I D + D+ +T RLLV S IGC+ G+ GS ++E+ T A + I K P
Sbjct: 425 IVDLVADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMESLTGATIEILPKEMLPTYLSGT 483
Query: 437 DELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSGTGISMPPLLPS 496
DELV++ GEV + RDALV++ RLR KD ++ +PP + +
Sbjct: 484 DELVQIQGEVKAARDALVEVTSRLRSYLYKD-------------VFQK----DLPPTVSA 526
Query: 497 IPPVGPLGYDQRADSGSGI----GMLSSSSLYGYGSLSMGDSPYGS----------MSSY 542
P G G Q A S + G Y ++ +P S +
Sbjct: 527 PGPAGTAGGLQAASSNNPTPAREGHSGGDPPATYQNVQSASTPQPSKDARGSSAETVKQN 586
Query: 543 SSKLYGGLPPPLT------------LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMS 590
S+ LPPP LEV++P AV K+I K+ + LA I ++SGA + +
Sbjct: 587 ESEHREDLPPPTMNRIPVTLVTRSILEVVIPEPAVPKLITKSKNKLAQISELSGANVTLV 646
Query: 591 DSKSSRGDRVALISGTPEQKRAAENLIQAFIMA 623
+ + +++ ISGTPEQ A++L+Q FI++
Sbjct: 647 EDRPDVTEKIIQISGTPEQAERAQSLLQGFILS 679
>gi|296086352|emb|CBI31941.3| unnamed protein product [Vitis vinifera]
Length = 583
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 173/509 (33%), Positives = 265/509 (52%), Gaps = 95/509 (18%)
Query: 3 DSGKRYRSQRDNDRDGKNQKRRINEKDEKGNE----ESVIYRILCPDGVIGSVIGKSGKV 58
D GKR SQ D +G +++R N D+K E +YR LCP IGS+IG+ G +
Sbjct: 73 DYGKRSHSQSDYGGNGGSKRR--NPGDDKEQHGIGVEDTVYRYLCPVRKIGSIIGRGGDI 130
Query: 59 INSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCA-AQDALLK 117
+R ET++ +++ + PG ++RVVTIYS E + F D L + AQDAL +
Sbjct: 131 AKQLRSETKSNIRIGETMPGCEERVVTIYS------SSEETNPFGDTGELVSPAQDALFR 184
Query: 118 VHAAIANAVANATDNDKKRKEKEEC--QILVPSSQSANIIGKAGATIKRLRSKTRTSIKV 175
VH I VA D++ +E ++ ++LVPS Q +IGK G I+ +RS+TR I++
Sbjct: 185 VHDRI---VAGELPADEEPEEAQQVTVRMLVPSDQIGCVIGKGGQVIQNIRSETRAQIRI 241
Query: 176 TPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPP 235
KD P CA+ D + I G++ V+KAL +++ +++
Sbjct: 242 L-KDEHLPP--CALSSDELLQIIGDASVVRKALHQLASRLHEN----------------- 281
Query: 236 SIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTWPVYSTGLSL 295
PSRS +L ++ P++ +G W S
Sbjct: 282 ------------------------PSRSQHLLLSSS--PNM---YQSGGDW-----SHSY 307
Query: 296 VSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVI 355
S S ++E +R++CP IG VIGKGGG IK IRQ SGA I VD + D+C+I
Sbjct: 308 YSARRDESSAKEFSLRLVCPTGNIGGVIGKGGGIIKQIRQESGASIKVDSSSAEGDDCII 367
Query: 356 TVTAIESPDDIKSMAVEAVLLLQTKINDE-----DDDTVTIRLLVSSKVIGCIIGKSGSI 410
++A E +D S ++A L LQ + +++ D VT RLLV S IGC+IGK G+I
Sbjct: 368 FISAKEFFED-PSPTIDAALRLQPRCSEKAERESSDSVVTTRLLVPSSRIGCLIGKGGAI 426
Query: 411 INEIRKRTKADVRI-SKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRD 469
I+E+R T+A++RI SK + PK A +DE+V++ GE+ +AL+Q+ LRL+ + L +R+
Sbjct: 427 ISEMRSVTRANIRILSKENLPKVASEDDEMVQITGELNVASNALLQVTLRLKAN-LFERE 485
Query: 470 GSRNPPVGADHIYSSGTGISMPPLLPSIP 498
G+ + A +PP LP +P
Sbjct: 486 GA----IAA-----------IPPTLPYLP 499
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 93/310 (30%), Positives = 145/310 (46%), Gaps = 70/310 (22%)
Query: 306 EELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTA------ 359
E+ V R LCP KIG +IG+GG K +R + + I + +T +E V+T+ +
Sbjct: 107 EDTVYRYLCPVRKIGSIIGRGGDIAKQLRSETKSNIRIGETMPGCEERVVTIYSSSEETN 166
Query: 360 -IESPDDIKSMAVEAVLLLQTKI---------NDEDDDTVTIRLLVSSKVIGCIIGKSGS 409
++ S A +A+ + +I E+ VT+R+LV S IGC+IGK G
Sbjct: 167 PFGDTGELVSPAQDALFRVHDRIVAGELPADEEPEEAQQVTVRMLVPSDQIGCVIGKGGQ 226
Query: 410 IINEIRKRTKADVRISKGDK-PKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDR 468
+I IR T+A +RI K + P CA ++DEL++++G+ VR AL Q+ RL ++
Sbjct: 227 VIQNIRSETRAQIRILKDEHLPPCALSSDELLQIIGDASVVRKALHQLASRLHEN----- 281
Query: 469 DGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGS 528
P + H+ LL S P ++Y G
Sbjct: 282 ------PSRSQHL-----------LLSSSP-----------------------NMYQSG- 300
Query: 529 LSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIE 588
GD S S YS++ +L ++ P +G VIGK G + IR+ SGA+I+
Sbjct: 301 ---GD---WSHSYYSARRDESSAKEFSLRLVCPTGNIGGVIGKGGGIIKQIRQESGASIK 354
Query: 589 MSDSKSSRGD 598
+ DS S+ GD
Sbjct: 355 V-DSSSAEGD 363
>gi|359473301|ref|XP_002272287.2| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
vinifera]
Length = 517
Score = 205 bits (521), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 172/507 (33%), Positives = 267/507 (52%), Gaps = 91/507 (17%)
Query: 3 DSGKRYRSQRDNDRDGKNQKRRI-NEKDEKG-NEESVIYRILCPDGVIGSVIGKSGKVIN 60
D GKR SQ D +G +++R ++K++ G E +YR LCP IGS+IG+ G +
Sbjct: 7 DYGKRSHSQSDYGGNGGSKRRNPGDDKEQHGIGVEDTVYRYLCPVRKIGSIIGRGGDIAK 66
Query: 61 SIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCA-AQDALLKVH 119
+R ET++ +++ + PG ++RVVTIYS E + F D L + AQDAL +VH
Sbjct: 67 QLRSETKSNIRIGETMPGCEERVVTIYS------SSEETNPFGDTGELVSPAQDALFRVH 120
Query: 120 AAIANAVANATDNDKKRKEKEEC--QILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTP 177
I VA D++ +E ++ ++LVPS Q +IGK G I+ +RS+TR I++
Sbjct: 121 DRI---VAGELPADEEPEEAQQVTVRMLVPSDQIGCVIGKGGQVIQNIRSETRAQIRIL- 176
Query: 178 KDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSI 237
KD P CA+ D + I G++ V+KAL +++ +++
Sbjct: 177 KDEHLPP--CALSSDELLQIIGDASVVRKALHQLASRLHEN------------------- 215
Query: 238 IIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVS 297
PSRS +L ++ P++ +G W S S
Sbjct: 216 ----------------------PSRSQHLLLSSS--PNM---YQSGGDW-----SHSYYS 243
Query: 298 GLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITV 357
S ++E +R++CP IG VIGKGGG IK IRQ SGA I VD + D+C+I +
Sbjct: 244 ARRDESSAKEFSLRLVCPTGNIGGVIGKGGGIIKQIRQESGASIKVDSSSAEGDDCIIFI 303
Query: 358 TAIESPDDIKSMAVEAVLLLQTKINDE-----DDDTVTIRLLVSSKVIGCIIGKSGSIIN 412
+A E +D S ++A L LQ + +++ D VT RLLV S IGC+IGK G+II+
Sbjct: 304 SAKEFFED-PSPTIDAALRLQPRCSEKAERESSDSVVTTRLLVPSSRIGCLIGKGGAIIS 362
Query: 413 EIRKRTKADVRI-SKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGS 471
E+R T+A++RI SK + PK A +DE+V++ GE+ +AL+Q+ LRL+ + L +R+G+
Sbjct: 363 EMRSVTRANIRILSKENLPKVASEDDEMVQITGELNVASNALLQVTLRLKAN-LFEREGA 421
Query: 472 RNPPVGADHIYSSGTGISMPPLLPSIP 498
+ A +PP LP +P
Sbjct: 422 ----IAA-----------IPPTLPYLP 433
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 93/310 (30%), Positives = 145/310 (46%), Gaps = 70/310 (22%)
Query: 306 EELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTA------ 359
E+ V R LCP KIG +IG+GG K +R + + I + +T +E V+T+ +
Sbjct: 41 EDTVYRYLCPVRKIGSIIGRGGDIAKQLRSETKSNIRIGETMPGCEERVVTIYSSSEETN 100
Query: 360 -IESPDDIKSMAVEAVLLLQTKI---------NDEDDDTVTIRLLVSSKVIGCIIGKSGS 409
++ S A +A+ + +I E+ VT+R+LV S IGC+IGK G
Sbjct: 101 PFGDTGELVSPAQDALFRVHDRIVAGELPADEEPEEAQQVTVRMLVPSDQIGCVIGKGGQ 160
Query: 410 IINEIRKRTKADVRISKGDK-PKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDR 468
+I IR T+A +RI K + P CA ++DEL++++G+ VR AL Q+ RL ++
Sbjct: 161 VIQNIRSETRAQIRILKDEHLPPCALSSDELLQIIGDASVVRKALHQLASRLHEN----- 215
Query: 469 DGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGS 528
P + H+ LL S P ++Y G
Sbjct: 216 ------PSRSQHL-----------LLSSSP-----------------------NMYQSG- 234
Query: 529 LSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIE 588
GD S S YS++ +L ++ P +G VIGK G + IR+ SGA+I+
Sbjct: 235 ---GD---WSHSYYSARRDESSAKEFSLRLVCPTGNIGGVIGKGGGIIKQIRQESGASIK 288
Query: 589 MSDSKSSRGD 598
+ DS S+ GD
Sbjct: 289 V-DSSSAEGD 297
>gi|356557593|ref|XP_003547100.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 710
Score = 204 bits (520), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 191/685 (27%), Positives = 318/685 (46%), Gaps = 119/685 (17%)
Query: 37 VIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH------- 89
V +R+LC IG VIGKSG VI +++Q T A++++ D DR++ + +
Sbjct: 45 VAFRLLCNASRIGGVIGKSGSVIKTLQQSTGAKIRIEDAPQELPDRIILVIADAALSGKI 104
Query: 90 -VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPS 148
++++E +EV AQ+ALLKV I + D + C+++ +
Sbjct: 105 LLRNEEVIEVSK----------AQEALLKVFDRILRSGGGDRSVDVGDRVMS-CRLVADA 153
Query: 149 SQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKAL 208
+Q+ ++IGK G ++R++ +T I+V D CA D + I G +VKKAL
Sbjct: 154 AQAGSVIGKGGKVVERIKKETGCKIRVLTDDLPL----CASASDEIIEIEGRVSSVKKAL 209
Query: 209 FAISAIMYKFSPREDI------PLETTVREA------PPSIIIPS-DVPIYPPGGLYPNA 255
A+S + P + P E EA S P + P G L
Sbjct: 210 VAVSQRLQDCHPVDRTKMMGSKPYEIVQYEALDALPRATSTAAPRVTLTAAPRGTLTAVQ 269
Query: 256 DPILPSRSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCP 315
+ + S + YA ++ P T ++ VS L + +E+ R+LC
Sbjct: 270 HETVDHLLLRSSALSTLSSSSNSYATRIHSLP---TEVNRVSSLEPKALKQEVTFRILCS 326
Query: 316 FNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVL 375
+++G VIGKGG +++++ +GA I + ++ +IT+ A E+P+ S A +A +
Sbjct: 327 NDRVGGVIGKGGNIVRALQSETGATISIGPAVAECEDRLITIAASENPESRYSPAQKAAV 386
Query: 376 LLQTKIND-----------EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRI 424
L+ ++ + VT+RL+V S +GC+IGK G I++E+RK T A++RI
Sbjct: 387 LVFSRSIEVGFEKGLDSGLNKGSIVTVRLVVPSSQVGCLIGKGGVIVSEMRKATGANIRI 446
Query: 425 SKGDK-PKCADANDELVEVVGEVGSVRDALVQIILRLRDDAL------------------ 465
D+ PKCA ND++V++ GE SV+DAL + RLRD+
Sbjct: 447 IGTDQVPKCASDNDQVVQISGEFSSVQDALYNAMGRLRDNLFVSTQNSAGTRSLSSLRVD 506
Query: 466 -----KDRD----GSRNPPV------------GADHI-------YSSGTGI--------S 489
+ +D GS+ PP G DH+ + S G+ S
Sbjct: 507 TSPYGRQQDVVPLGSQLPPATSHSLSRHTFAQGIDHLGLSRNLDHPSSPGLWTRNLDRPS 566
Query: 490 MPPLL------PSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYS 543
P L PS P + D R S G+ + ++ G S + D G S
Sbjct: 567 SPGLWTRNLDRPSSPGLWTRNLDHRPSSP---GLWAPPTVAGINSRGINDFSLGLTSRKG 623
Query: 544 S-KLYGGLPPPLT----LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGD 598
+L G + +E++VP + + V G+ GSNLA +R+ISGA + + + + D
Sbjct: 624 GLELVSGSKSAIVTNTIVEIVVPDDTIDCVYGENGSNLARLRQISGANVVVHEPRPGTSD 683
Query: 599 RVALISGTPEQKRAAENLIQAFIMA 623
R+ +ISGTP++ +AA++L+QAFI++
Sbjct: 684 RIIVISGTPDETQAAQSLLQAFILS 708
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 88/186 (47%), Gaps = 14/186 (7%)
Query: 24 RINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRV 83
R++ + K ++ V +RILC + +G VIGK G ++ +++ ET A + + +DR+
Sbjct: 306 RVSSLEPKALKQEVTFRILCSNDRVGGVIGKGGNIVRALQSETGATISIGPAVAECEDRL 365
Query: 84 VTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQ 143
+TI + E + A + A+L +I D+ + +
Sbjct: 366 ITIAA-----------SENPESRYSPAQKAAVLVFSRSIEVGFEKGLDSGLNKGSIVTVR 414
Query: 144 ILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEA 203
++VPSSQ +IGK G + +R T +I++ D CA + D V ISGE +
Sbjct: 415 LVVPSSQVGCLIGKGGVIVSEMRKATGANIRIIGTDQ---VPKCASDNDQVVQISGEFSS 471
Query: 204 VKKALF 209
V+ AL+
Sbjct: 472 VQDALY 477
>gi|357112153|ref|XP_003557874.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 538
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 162/480 (33%), Positives = 258/480 (53%), Gaps = 56/480 (11%)
Query: 5 GKRYRSQRDNDRDGKNQKRRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQ 64
GKRY +N G ++R + + +YR LC IGS+IG+ G++ +R
Sbjct: 11 GKRYSDYAEN---GGGKRRNPGDDTYAPCPDDTVYRYLCASRKIGSIIGRGGEIAKQLRT 67
Query: 65 ETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIAN 124
+T+A++++ + PG +RV+TI+S ++ VE + ++ +C AQDAL +VH +
Sbjct: 68 DTQAKIRIGESVPGCDERVITIFSSSRETNTVE-----DTEDKVCPAQDALFRVHEKL-- 120
Query: 125 AVANATDNDKKRKEKEE------CQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPK 178
TD+ +E EE ++LVPS Q IIGK G I+ +RS T + I+V
Sbjct: 121 ----ITDDGPGDEENEEGLAQVIVRLLVPSDQIGCIIGKGGHIIQGIRSDTGSHIRVL-- 174
Query: 179 DASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSII 238
++E +CA+ D + ISG+ V+KAL +S+ ++ R L +++ +
Sbjct: 175 -STEHLPACAISGDELLQISGDPLVVRKALLQVSSRLHDNPSRSQHLLASSLTQP----- 228
Query: 239 IPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQGY-ADTGNTWPVYSTGLSLVS 297
YP G + + S + P + A V GY D WP S+
Sbjct: 229 -------YPVGSRHGS------SSTTPVVGIAPMVNPYGGYKGDMVGDWP------SIYQ 269
Query: 298 GLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITV 357
S ++E +R+LC + +G VIGKGGG IK IRQ SGA I V D+ D+C+ITV
Sbjct: 270 PRREESSAKEFSLRLLCAASDVGGVIGKGGGIIKQIRQESGAFIKV-DSSSAEDDCIITV 328
Query: 358 TAIESPDDIKSMAVEAVLLLQTKINDEDD-----DTVTIRLLVSSKVIGCIIGKSGSIIN 412
+A E +D S ++A + LQ + +++ D + T RLLVS+ IGC+IGK GSII
Sbjct: 329 SAKEFFEDPISPTIDATVRLQPRCSEKTDPESGEPSYTTRLLVSTSRIGCLIGKGGSIIT 388
Query: 413 EIRKRTKADVRI-SKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGS 471
EIR+ ++A++RI SK + PK A ++E+V++ G++ + ALVQI RL+ + +R+GS
Sbjct: 389 EIRRTSRANIRILSKENVPKVASEDEEMVQISGDLDVAKHALVQITTRLKANFF-EREGS 447
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 109/342 (31%), Positives = 159/342 (46%), Gaps = 57/342 (16%)
Query: 306 EELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITV-------T 358
++ V R LC KIG +IG+GG K +R + A+I + ++ DE VIT+
Sbjct: 38 DDTVYRYLCASRKIGSIIGRGGEIAKQLRTDTQAKIRIGESVPGCDERVITIFSSSRETN 97
Query: 359 AIESPDDIKSMAVEAVLLLQTKI----------NDEDDDTVTIRLLVSSKVIGCIIGKSG 408
+E +D A +A+ + K+ N+E V +RLLV S IGCIIGK G
Sbjct: 98 TVEDTEDKVCPAQDALFRVHEKLITDDGPGDEENEEGLAQVIVRLLVPSDQIGCIIGKGG 157
Query: 409 SIINEIRKRTKADVRI-SKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKD 467
II IR T + +R+ S P CA + DEL+++ G+ VR AL+Q+ RL D+ +
Sbjct: 158 HIIQGIRSDTGSHIRVLSTEHLPACAISGDELLQISGDPLVVRKALLQVSSRLHDNPSRS 217
Query: 468 RD-----GSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSS 522
+ ++ PVG+ H SS T P++ P V P G
Sbjct: 218 QHLLASSLTQPYPVGSRHGSSSTT-----PVVGIAPMVNPYG------------------ 254
Query: 523 LYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKI 582
GY +GD P S Y + +L +L A+ VG VIGK G + IR+
Sbjct: 255 --GYKGDMVGDWP----SIYQPRREESSAKEFSLRLLCAASDVGGVIGKGGGIIKQIRQE 308
Query: 583 SGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFIMAT 624
SGA I++ DS S+ D + +S K E+ I I AT
Sbjct: 309 SGAFIKV-DSSSAEDDCIITVSA----KEFFEDPISPTIDAT 345
>gi|357463999|ref|XP_003602281.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355491329|gb|AES72532.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 646
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 166/615 (26%), Positives = 285/615 (46%), Gaps = 67/615 (10%)
Query: 39 YRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEV 98
YR+LC D G VIGKSG +I SIRQ T A + V +P G ++R++ I D
Sbjct: 65 YRLLCHDLRAGGVIGKSGSIIKSIRQHTGAWINVHEPVAGDEERIIEI-------SDTRR 117
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDND------KKRKEKEECQILVPSSQSA 152
D AQ+ALL +H + D + ++ +++V
Sbjct: 118 RDPDGRMPQFSPAQEALLLIHERLLENDPGFEDEEDYGGGRGGGGKRVSSRLVVSKMHVG 177
Query: 153 NIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAIS 212
+++GK G I+++R +T+T I++ P+D+ P C + V ++G+ VK A IS
Sbjct: 178 SLLGKGGKIIEQMRIETKTQIRILPRDSYLP--RCVSMSEEIVQVTGDIHNVKNAFLVIS 235
Query: 213 AIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAAR 272
+ + + S D E S +PP Y +P + +R
Sbjct: 236 SRL-RESQHRDRSGERGGGGGQFHGRGHSPERFFPPDDDY-----------LPHVSSGSR 283
Query: 273 VPDLQ--GYADT-------GNTWPVYSTGLSLVSGLVGASQS---EELVIRVLCPFNKIG 320
P ++ G+ N S + + V + E+L+ R+LCP +++
Sbjct: 284 RPSVERSGFGSRIATTNSRNNNHASISYSMDQGAAPVAHDEQPFYEDLIFRILCPVDRVD 343
Query: 321 RVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTK 380
R++G+ GG ++ ++ G + + D DE ++ +T+ E P+D A EA+L +QT
Sbjct: 344 RIVGESGGILELLQDRVGVDVQISDRVGGSDEQMVIITSEEGPNDTMFPAQEALLHIQTH 403
Query: 381 INDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRI-SKGDKPKCADANDEL 439
I D D +T RL+V S I C+ GK+ S+ +EI + T A V+I + + P C DEL
Sbjct: 404 IVDLSDSIITTRLIVPSSDIECLDGKNASL-SEIERSTGASVQILPREELPPCIANTDEL 462
Query: 440 VEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSGTGISMPPL--LPSI 497
V++VGE+ + R+ ++ + +LR +D I T +PP LPS+
Sbjct: 463 VQIVGEIEAARNVILDVTAKLRSYVYRD-------------ILQWDT---VPPSAPLPSV 506
Query: 498 PPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSM--SSYSSKLYGGLPPPLT 555
A++ + + S ++ S G + G S L GL ++
Sbjct: 507 EASSSNSMATVAETATANQNMQSVAVALASKESGGSTEMGKQKESDRRDDLPTGLNRTVS 566
Query: 556 ------LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQ 609
LEV++P AV K++ K+ S LA I ++SGA +++ + + +++ ISGTPEQ
Sbjct: 567 LVTRSILEVVIPEYAVPKLLAKSKSKLAQISELSGANVKLVEDRPDEKEKIIQISGTPEQ 626
Query: 610 KRAAENLIQAFIMAT 624
++L+Q FI++T
Sbjct: 627 AERGQSLLQGFILST 641
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 73/336 (21%), Positives = 145/336 (43%), Gaps = 41/336 (12%)
Query: 28 KDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIY 87
DE+ E +I+RILCP + ++G+SG ++ ++ V++ D G+ +++V I
Sbjct: 322 HDEQPFYEDLIFRILCPVDRVDRIVGESGGILELLQDRVGVDVQISDRVGGSDEQMVIIT 381
Query: 88 SHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVP 147
S E + + AQ+ALL + I + + +++VP
Sbjct: 382 S------------EEGPNDTMFPAQEALLHIQTHIVDLSDSIIT----------TRLIVP 419
Query: 148 SSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKA 207
SS + GK A++ + T S+++ P++ P C D V I GE EA +
Sbjct: 420 SSDIECLDGK-NASLSEIERSTGASVQILPREELPP---CIANTDELVQIVGEIEAARNV 475
Query: 208 LFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSI 267
+ ++A + + R+ + +T PPS +PS V + A+ ++++ S+
Sbjct: 476 ILDVTAKLRSYVYRDILQWDT----VPPSAPLPS-VEASSSNSMATVAETATANQNMQSV 530
Query: 268 LGAARVPDLQGYADTGNTWPV-----YSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRV 322
A + G + G TGL+ LV S ++ V+ P + ++
Sbjct: 531 AVALASKESGGSTEMGKQKESDRRDDLPTGLNRTVSLVTRS-----ILEVVIPEYAVPKL 585
Query: 323 IGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
+ K + I + SGA + + + + + E +I ++
Sbjct: 586 LAKSKSKLAQISELSGANVKLVEDRPDEKEKIIQIS 621
>gi|15217969|ref|NP_175569.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|12321677|gb|AAG50879.1|AC025294_17 hypothetical protein [Arabidopsis thaliana]
gi|12325367|gb|AAG52626.1|AC024261_13 hypothetical protein; 15135-12645 [Arabidopsis thaliana]
gi|31711718|gb|AAP68215.1| At1g51580 [Arabidopsis thaliana]
gi|110735740|dbj|BAE99849.1| hypothetical protein [Arabidopsis thaliana]
gi|332194564|gb|AEE32685.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 621
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 177/658 (26%), Positives = 299/658 (45%), Gaps = 125/658 (18%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVD--PFPGAKDRVVTIYSHVKD 92
ESV +R+LCP G++IGK G VI ++ T ++++V+D P P + V+ I K
Sbjct: 17 ESVHFRLLCPATRTGAIIGKGGSVIRHLQSVTGSKIRVIDDIPVPSEERVVLIIAPSGKK 76
Query: 93 KEDVEVDDEFN---------------------DKEPLCAAQDALLKVHAAIANAVANAT- 130
K++ V D N D+E +AQ ALL+V I AT
Sbjct: 77 KDESNVCDSENPGSEEPKQEKGSECAGTSGGDDEEAPSSAQMALLRVFERIVFGDDAATV 136
Query: 131 DNDKKRKEKEE--CQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCA 188
D D+ K + E C+++V +Q ++ K G I+++R + ++++ D P CA
Sbjct: 137 DGDELDKGESEGLCRMIVRGNQVDYLMSKGGKMIQKIREDSGAIVRISSTDQIPP---CA 193
Query: 189 MEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSI-IIPSDVPIYP 247
D + ++G+ +VKKAL ++ + + APP+ P P YP
Sbjct: 194 FPGDVVIQMNGKFSSVKKALLLVTNCLQESG-------------APPTWDECPFPQPGYP 240
Query: 248 PG----GLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGAS 303
P +P D P +P +G P ++
Sbjct: 241 PEYHSMEYHPQWD-HPPPNPMPEDVGPFNRPVVE-------------------------- 273
Query: 304 QSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESP 363
EE+ R+LCP +K+G +IGKGG +++++ SGA I V D + +E +I ++A E+
Sbjct: 274 --EEVAFRLLCPADKVGSLIGKGGAVVRALQNESGASIKVSDPTHDSEERIIVISARENL 331
Query: 364 DDIKSMAVEAVLLLQTKIND---EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKA 420
+ S+A + V+ + +I + E V RLLV S IG ++GK G +I+E+R+ T A
Sbjct: 332 ERRHSLAQDGVMRVHNRIVEIGFEPSAAVVARLLVHSPYIGRLLGKGGHLISEMRRATGA 391
Query: 421 DVRISKGDKP-KCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDR----------- 468
+R+ D+ K +DE+V+V+G + +V+DAL QI+ RLR+ R
Sbjct: 392 SIRVFAKDQATKYESQHDEIVQVIGNLKTVQDALFQILCRLREAMFPGRLPFQGMGGPPP 451
Query: 469 ------------DGSRNPPVGADHIYS----------SGTGISMPPLLPSIPPVGPLGYD 506
G R P D +S G G PP P P+ +
Sbjct: 452 PFMGPYPEPPPPFGPRQYPASPDRYHSPVGPFHERHCHGPGFDRPPGPGFDRPPSPMSWT 511
Query: 507 -QRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAV 565
Q G GM+ +G+ ++ + P GS + + +E+++P +
Sbjct: 512 PQPGIDGHPGGMVPPDVNHGF---ALRNEPIGSENPVMTS--------ANVEIVIPQAYL 560
Query: 566 GKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFIMA 623
G V G+ SNL I+++SGA + + D K+ + + ++SGT +Q A++L+ AFI+
Sbjct: 561 GHVYGENCSNLNYIKQVSGANVVVHDPKAGTTEGLVVVSGTSDQAHFAQSLLHAFILC 618
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 87/178 (48%), Gaps = 22/178 (12%)
Query: 34 EESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDK 93
EE V +R+LCP +GS+IGK G V+ +++ E+ A +KV DP +++R++ I + +
Sbjct: 273 EEEVAFRLLCPADKVGSLIGKGGAVVRALQNESGASIKVSDPTHDSEERIIVISA----R 328
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
E++E AQD +++VH I + R +LV S
Sbjct: 329 ENLERRHSL--------AQDGVMRVHNRIVEIGFEPSAAVVAR-------LLVHSPYIGR 373
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAI 211
++GK G I +R T SI+V KD + S + D V + G + V+ ALF I
Sbjct: 374 LLGKGGHLISEMRRATGASIRVFAKDQATKYES---QHDEIVQVIGNLKTVQDALFQI 428
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 90/210 (42%), Gaps = 49/210 (23%)
Query: 302 ASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDD---------------- 345
A+ +E + R+LCP + G +IGKGG I+ ++ +G++I V D
Sbjct: 13 ATAAESVHFRLLCPATRTGAIIGKGGSVIRHLQSVTGSKIRVIDDIPVPSEERVVLIIAP 72
Query: 346 ---TKDNRDECVITVTAIESP----------------DDIKSMAVEAVLLLQTKINDEDD 386
KD + C E P ++ S A A+L + +I DD
Sbjct: 73 SGKKKDESNVCDSENPGSEEPKQEKGSECAGTSGGDDEEAPSSAQMALLRVFERIVFGDD 132
Query: 387 DTVT-------------IRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDK-PKC 432
R++V + ++ K G +I +IR+ + A VRIS D+ P C
Sbjct: 133 AATVDGDELDKGESEGLCRMIVRGNQVDYLMSKGGKMIQKIREDSGAIVRISSTDQIPPC 192
Query: 433 ADANDELVEVVGEVGSVRDALVQIILRLRD 462
A D ++++ G+ SV+ AL+ + L++
Sbjct: 193 AFPGDVVIQMNGKFSSVKKALLLVTNCLQE 222
>gi|297814608|ref|XP_002875187.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321025|gb|EFH51446.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 469
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 146/455 (32%), Positives = 227/455 (49%), Gaps = 64/455 (14%)
Query: 23 RRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDR 82
R I + + G E++V YR LCP GS+IG+ G++ IR ET+A +++ + PG +R
Sbjct: 5 RNIYDNNGAGLEDTV-YRYLCPVRKAGSIIGRGGEIAKQIRSETKANMRINEALPGCDER 63
Query: 83 VVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEEC 142
VVTIYS+ ++ +E D++F +C A DAL KVH I + + E E
Sbjct: 64 VVTIYSNSEETNRIEDDEDF-----VCPAFDALFKVHDMIVAEEFDNDGDYDNGDEYSER 118
Query: 143 Q-----ILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLI 197
Q +LVPS Q +IGK G I++LR+ T I+V + P + A+ D + I
Sbjct: 119 QTVTVRMLVPSDQIGCLIGKGGQVIQKLRNDTNAQIRVINDNL--PICALALSHDELLQI 176
Query: 198 SGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADP 257
G+ AV++AL+ ++ ++Y R + S + PGG
Sbjct: 177 IGDPSAVREALYQVAFLLYDNPSR-----------FQNYFLSSSSTLQHQPGG------- 218
Query: 258 ILPSRSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFN 317
IL S P ++ S A+ + I +CP
Sbjct: 219 ILMS-------------------------PAITSSHKNYSAPRDAADARVFSICFICPAE 253
Query: 318 KIGRVIGKGGGTIKSIRQASGAQIDVDDTK-DNRDECVITVTAIESPDDIKSMAVEAVLL 376
+G VIGKGG I RQ SGA I V + D D+C+I ++A E +D +S V A L
Sbjct: 254 NVGGVIGKGGCFINQTRQESGATIKVHTPETDEDDDCIIFISAKEFFED-QSPTVNAALR 312
Query: 377 LQTKIN-----DEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKG-DKP 430
LQT+ + D D ++ R+L+ S +GC+IGK G++I+E+R TKA++RI +G D P
Sbjct: 313 LQTRCSEKVGKDSSDSAISTRVLIPSSQVGCLIGKGGALISEMRSVTKANIRIFQGEDVP 372
Query: 431 KCADANDELVEVVGEVGSVRDALVQIILRLRDDAL 465
+ A N+E+V++ G + + AL Q++LRLR +
Sbjct: 373 RIARENEEMVQITGSLDAAIKALTQVMLRLRANVF 407
>gi|302143921|emb|CBI23026.3| unnamed protein product [Vitis vinifera]
Length = 575
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 180/625 (28%), Positives = 293/625 (46%), Gaps = 101/625 (16%)
Query: 39 YRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEV 98
YRILC D G VIGKSG +I SIRQ T A + V + PG ++R++ I D
Sbjct: 6 YRILCHDVKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEI-------SDTRR 58
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
D AQ+AL +H I + A + ++V ++GK
Sbjct: 59 RDPEGRMPQFSPAQEALFMIHDRILESDAGFGNG-----------MVVSRMHVGCLLGKG 107
Query: 159 GATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKF 218
G I+++R +T+T I++ P+D + P C + V + G+ AVK A+ IS+ + +
Sbjct: 108 GKIIEQMRIETKTQIRILPRDHNLP--RCVSMSEEIVQVVGDVNAVKNAIANISSRLRES 165
Query: 219 SPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPI----LPSRSVPSILGAARVP 274
R+ ++ +P P D Y P PI SR ++G
Sbjct: 166 QHRDRSHFHGRIQSSPERFFPPDDD--YSHMNNAPRRMPIDGNSFGSRVSTGLVGT---- 219
Query: 275 DLQGYADTGNTWPVYSTGLSLVSGLV----GASQ--SEELVIRVLCPFNKIGRVIGKGGG 328
N++ ++G +L SG A Q E++V R+LCP +K+ V+G+ G
Sbjct: 220 -------RSNSFASRTSGYTLESGAAPIADNAQQFLGEDIVFRILCPVDKVECVVGESDG 272
Query: 329 TIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKIND---ED 385
I+ ++ G + V D +E +I +T+ E PDD A EA+L +QT+I + +
Sbjct: 273 IIELLQNEIGVDVKVADHVAGSNEQIIVITSEEGPDDELFPAQEALLHIQTRIVNLLPDK 332
Query: 386 DDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDK-PKCADANDELVEVVG 444
++ +T RLLV S IGC G+ S ++E+R+ T A+++I ++ P DEL+E+VG
Sbjct: 333 ENVITTRLLVPSSEIGCFEGRDCS-LSEMRRLTGANIQIVPREQLPAFISGTDELLEIVG 391
Query: 445 EVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLG 504
E+ + RDALV++ RLR ++Y MPP PSI G L
Sbjct: 392 EIKAARDALVEVTSRLR-----------------SYLYREFFPKDMPP--PSISAPGSL- 431
Query: 505 YDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYS----SKLYGG----------- 549
A S + I + + G+ + + Y ++ + + SK GG
Sbjct: 432 ---EASSPNNI----TPAREGHTASDPPTTNYQNVQAIASVQPSKDSGGTGGETVKQNET 484
Query: 550 -------LPPPL----TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGD 598
+P L TLEV++P +AV K+I ++ + LA I + SGA + + + +
Sbjct: 485 VPSVLNRIPVTLVTRSTLEVVIPEHAVPKLITRSKNKLAQISEWSGANVTLLEDRLEATG 544
Query: 599 RVALISGTPEQKRAAENLIQAFIMA 623
++ ISGTPEQ A++L+Q FI++
Sbjct: 545 KIIQISGTPEQTEKAQSLLQGFILS 569
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 136/315 (43%), Gaps = 35/315 (11%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKE 94
E +++RILCP + V+G+S +I ++ E VKV D G+ ++++ I S
Sbjct: 250 EDIVFRILCPVDKVECVVGESDGIIELLQNEIGVDVKVADHVAGSNEQIIVITS------ 303
Query: 95 DVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANI 154
+E D E L AQ+ALL + I N + + + R +LVPSS+
Sbjct: 304 -----EEGPDDE-LFPAQEALLHIQTRIVNLLPDKENVITTR-------LLVPSSEIGCF 350
Query: 155 IGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAI 214
G+ ++ +R T +I++ P++ S D + I GE +A + AL +++
Sbjct: 351 EGR-DCSLSEMRRLTGANIQIVPREQLPAFISGT---DELLEIVGEIKAARDALVEVTSR 406
Query: 215 MYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYP------NADPILPSRSVPSIL 268
+ + RE P + PPSI P + P + P +DP P+ + ++
Sbjct: 407 LRSYLYREFFPKDM----PPPSISAPGSLEASSPNNITPAREGHTASDP--PTTNYQNVQ 460
Query: 269 GAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGG 328
A V + TG + + V + + + V+ P + + ++I +
Sbjct: 461 AIASVQPSKDSGGTGGETVKQNETVPSVLNRIPVTLVTRSTLEVVIPEHAVPKLITRSKN 520
Query: 329 TIKSIRQASGAQIDV 343
+ I + SGA + +
Sbjct: 521 KLAQISEWSGANVTL 535
>gi|357112139|ref|XP_003557867.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 542
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 160/477 (33%), Positives = 260/477 (54%), Gaps = 50/477 (10%)
Query: 5 GKRYRSQRDNDRDGKNQKRRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQ 64
GKR+ +N G ++R + + +YR LC IGS+IG+ G++ +R
Sbjct: 11 GKRHSDYSEN---GGGKRRNPGDDTYAPGPDDTVYRYLCTSRKIGSIIGRGGEIAKQLRT 67
Query: 65 ETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIAN 124
+T+A++++ + PG +RV+TI+S ++ +E + ++ +C AQDAL +VH +
Sbjct: 68 DTQAKIRIGESVPGCDERVITIFSSSRETNTIE-----DTEDKVCPAQDALFRVHEKL-- 120
Query: 125 AVANATDNDKKRKE---KEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+A+ D++ +E + ++LVPS Q IIGK G I+ +RS T + I+V ++
Sbjct: 121 -IADDGPGDEENEEGLAQVTVRLLVPSDQIGCIIGKGGHIIQGIRSDTGSQIRVL---SN 176
Query: 182 EPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPS 241
E +C + D + ISG+ V+KAL +S+ ++ D P + +A PS++ P
Sbjct: 177 ERLPACGISGDELLQISGDPLVVRKALLQVSSRLH------DNPSRSQHLQA-PSLMQP- 228
Query: 242 DVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQGY-ADTGNTWPVYSTGLSLVSGLV 300
YP S + P + A V GY D WP S+
Sbjct: 229 ----------YPVGSRNGSSSTAPVVGIAPMVSPYGGYKGDMVGDWP------SIYQPRR 272
Query: 301 GASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAI 360
S +++ +R+LC + +G VIGKGGG IK IRQ SGA I V D+ D+C+ITV+A
Sbjct: 273 EDSSAKDFSLRLLCAASDVGGVIGKGGGIIKQIRQESGAFIKV-DSSSAEDDCIITVSAK 331
Query: 361 ESPDDIKSMAVEAVLLLQTKINDEDD-----DTVTIRLLVSSKVIGCIIGKSGSIINEIR 415
E +D S ++A + LQ K +++ D + T RLLVS+ IGC+IGK GSII EIR
Sbjct: 332 EFFEDPVSPTIDATVRLQPKCSEKTDPESGEPSYTTRLLVSTSQIGCLIGKGGSIITEIR 391
Query: 416 KRTKADVRI-SKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGS 471
+ ++A++RI SK + PK A ++E+V++ G++ R ALVQI RL+ + +R+G+
Sbjct: 392 RTSRANIRILSKENVPKVASEDEEMVQISGDLEVARHALVQITTRLKANFF-EREGA 447
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 101/318 (31%), Positives = 152/318 (47%), Gaps = 45/318 (14%)
Query: 306 EELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITV-------T 358
++ V R LC KIG +IG+GG K +R + A+I + ++ DE VIT+
Sbjct: 38 DDTVYRYLCTSRKIGSIIGRGGEIAKQLRTDTQAKIRIGESVPGCDERVITIFSSSRETN 97
Query: 359 AIESPDDIKSMAVEAVLLLQTKI----------NDEDDDTVTIRLLVSSKVIGCIIGKSG 408
IE +D A +A+ + K+ N+E VT+RLLV S IGCIIGK G
Sbjct: 98 TIEDTEDKVCPAQDALFRVHEKLIADDGPGDEENEEGLAQVTVRLLVPSDQIGCIIGKGG 157
Query: 409 SIINEIRKRTKADVRISKGDK-PKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKD 467
II IR T + +R+ ++ P C + DEL+++ G+ VR AL+Q+ RL D+
Sbjct: 158 HIIQGIRSDTGSQIRVLSNERLPACGISGDELLQISGDPLVVRKALLQVSSRLHDN---- 213
Query: 468 RDGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLY-GY 526
P + H+ + P L PVG + + + +G+ S Y GY
Sbjct: 214 -------PSRSQHLQA--------PSLMQPYPVG--SRNGSSSTAPVVGIAPMVSPYGGY 256
Query: 527 GSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGAT 586
+GD P S Y + +L +L A+ VG VIGK G + IR+ SGA
Sbjct: 257 KGDMVGDWP----SIYQPRREDSSAKDFSLRLLCAASDVGGVIGKGGGIIKQIRQESGAF 312
Query: 587 IEMSDSKSSRGDRVALIS 604
I++ DS S+ D + +S
Sbjct: 313 IKV-DSSSAEDDCIITVS 329
>gi|294462548|gb|ADE76820.1| unknown [Picea sitchensis]
Length = 340
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 135/320 (42%), Positives = 187/320 (58%), Gaps = 40/320 (12%)
Query: 333 IRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTK-----INDEDDD 387
IRQ +GA I V D + DE VI V++ E DD S +EAVL LQ K I + +
Sbjct: 22 IRQETGANIKVIDQVPDCDERVIVVSSKEFVDDRISPTLEAVLHLQFKTSEKSIEEGKEG 81
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRI-SKGDKPKCADANDELVEVVGEV 446
+T R LV S IGC++GK GSII+E+RKRT+A++RI SK + PKCA N+ELV+V+GEV
Sbjct: 82 VITTRFLVPSNSIGCLLGKGGSIISEMRKRTRANIRIMSKDNIPKCAGENEELVQVIGEV 141
Query: 447 GSVRDALVQIILRLRDDALKDRDGSRN-----PPVGA-------DHIYSSGTGISMPPLL 494
R+AL+QI RLR + KD+DG N PP + D + G + +
Sbjct: 142 DVAREALIQIATRLRSNVFKDQDGGSNAGSVVPPSLSLYGRGVPDSGFGRGDELGSTGRM 201
Query: 495 PSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSP----YGSMSSYSSKLY--G 548
S+P +G G+ G SS+S YGSL + YGS SS+S+ G
Sbjct: 202 YSLPSLGL--------EGTASGRYSSAS---YGSLGGVQNGGAGGYGSFSSFSTSRAPAG 250
Query: 549 GLPPPL-----TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALI 603
GLP + T+EV +P +VG ++G+ GSN++ IR+ISGA +++ +SK DRV I
Sbjct: 251 GLPAGVAKSGSTVEVTIPNKSVGSILGRGGSNISQIREISGAKVKLHESKPGGTDRVVEI 310
Query: 604 SGTPEQKRAAENLIQAFIMA 623
SGTPEQ AA++L+QAF M+
Sbjct: 311 SGTPEQTHAAQSLLQAFAMS 330
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 136/322 (42%), Gaps = 51/322 (15%)
Query: 60 NSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVH 119
N IRQET A +KV+D P +RV+ + S EF D + + +A+L +
Sbjct: 20 NQIRQETGANIKVIDQVPDCDERVIVVSSK-----------EFVD-DRISPTLEAVLHLQ 67
Query: 120 AAIANAVANATDNDKKRKEKEE----CQILVPSSQSANIIGKAGATIKRLRSKTRTSIKV 175
+ +K +E +E + LVPS+ ++GK G+ I +R +TR +I++
Sbjct: 68 FKTS---------EKSIEEGKEGVITTRFLVPSNSIGCLLGKGGSIISEMRKRTRANIRI 118
Query: 176 TPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPP 235
KD CA E + V + GE + ++AL I+ + ++ PP
Sbjct: 119 MSKDN---IPKCAGENEELVQVIGEVDVAREALIQIATRLRSNVFKDQDGGSNAGSVVPP 175
Query: 236 SI-IIPSDVP---------------IY--PPGGLYPNADPILPSRSVPSILGAARVPDLQ 277
S+ + VP +Y P GL A S S S LG +
Sbjct: 176 SLSLYGRGVPDSGFGRGDELGSTGRMYSLPSLGLEGTASGRYSSASYGS-LGGVQNGGAG 234
Query: 278 GYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQAS 337
GY ++ +ST + GL + V P +G ++G+GG I IR+ S
Sbjct: 235 GYG----SFSSFSTSRAPAGGLPAGVAKSGSTVEVTIPNKSVGSILGRGGSNISQIREIS 290
Query: 338 GAQIDVDDTKDNRDECVITVTA 359
GA++ + ++K + V+ ++
Sbjct: 291 GAKVKLHESKPGGTDRVVEISG 312
Score = 40.0 bits (92), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV--DPFP---GAKDRVV 84
E+G E + R L P IG ++GK G +I+ +R+ TRA ++++ D P G + +V
Sbjct: 76 EEGKEGVITTRFLVPSNSIGCLLGKGGSIISEMRKRTRANIRIMSKDNIPKCAGENEELV 135
Query: 85 TIYSHV 90
+ V
Sbjct: 136 QVIGEV 141
>gi|326513114|dbj|BAK06797.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 627
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 166/543 (30%), Positives = 250/543 (46%), Gaps = 93/543 (17%)
Query: 142 CQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGES 201
C++L Q ++GK G T++R+R ++ I+V P CA++ D + ISG
Sbjct: 112 CRMLAAGGQVGCVLGKGGKTVERMRQESGAQIRVFRNREQVPP--CALQGDELIHISGSF 169
Query: 202 EAVKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPG---GLYPNADPI 258
A +KAL +S + +PR D + PS P PPG G P DP
Sbjct: 170 SAARKALLLVSTCLQD-NPRPD------------TSNFPSGRPFGPPGSGVGCPPGVDP- 215
Query: 259 LPSRSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNK 318
S S L VPD + N + G +E+V R++C +
Sbjct: 216 ---HSQRSYLPPPHVPDYHARNFSSNG---AAPGPRFFV-------EQEIVFRMICLNDM 262
Query: 319 IGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQ 378
+G VIGKGG TI++++ +GA + V D + DE +I ++A E+ + ++S + +A+L +
Sbjct: 263 VGGVIGKGGSTIRALQSETGASVKVIDPVADSDERIIVISARENSEMMRSPSQDALLRVY 322
Query: 379 TKINDEDDD---TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDK-PKCAD 434
+KI++ D +V RLLV ++ IGC++GK GSII E+RK T A +RI ++ P+CA
Sbjct: 323 SKISEASMDKSSSVPARLLVPAQHIGCLLGKGGSIIAEMRKLTGASIRIFGNEQIPRCAQ 382
Query: 435 ANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRN-----PPVG----------AD 479
NDELV+V G S++DAL+ I R+RD + + PPVG A
Sbjct: 383 RNDELVQVTGSFQSIQDALLHITGRIRDLIIPPKPHPSGGMPPYPPVGNPSHHQSRQEAP 442
Query: 480 HIYSSGT-GISMPPLLPSIPPVGPLGYDQRADSGSGI-----GMLSSSSLYGYGSLSMGD 533
+S G M P P+ PP+GP G M + Y YG G
Sbjct: 443 SHHSGGMPPYPMHPFRPN-PPMGPFDVADPRPPGPPPSHPMEHMGADRMPYPYGCEQGGP 501
Query: 534 SPY---------------------------------GSMSSYSSKLYGGLPPPLTLEVLV 560
P+ G +SS +++ P T EV++
Sbjct: 502 RPFVEQPSPRTWAPEAPATDAPRSMPDTVPAVDFRKGPVSSSENQV--ATPATTTTEVVI 559
Query: 561 PANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAF 620
P +G V G GS+L I+KISGA I + D K + +I G PEQ + A++LI AF
Sbjct: 560 PCKYIGFVCGTNGSDLDEIKKISGAAITVHDPKPGDTNSTVIICGDPEQTKKAQSLIHAF 619
Query: 621 IMA 623
I
Sbjct: 620 IFC 622
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 92/369 (24%), Positives = 154/369 (41%), Gaps = 80/369 (21%)
Query: 34 EESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDK 93
E+ +++R++C + ++G VIGK G I +++ ET A VKV+DP + +R++ I + +
Sbjct: 249 EQEIVFRMICLNDMVGGVIGKGGSTIRALQSETGASVKVIDPVADSDERIIVISA----R 304
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
E+ E+ +QDALL+V++ I+ A + + + R +LVP+
Sbjct: 305 ENSEMMRS--------PSQDALLRVYSKISEASMDKSSSVPAR-------LLVPAQHIGC 349
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISA 213
++GK G+ I +R T SI++ +E CA D V ++G ++++ AL I+
Sbjct: 350 LLGKGGSIIAEMRKLTGASIRIF---GNEQIPRCAQRNDELVQVTGSFQSIQDALLHITG 406
Query: 214 ------IMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSI 267
I K P +P V P + P + GG+ P P+ P R P +
Sbjct: 407 RIRDLIIPPKPHPSGGMPPYPPVGN-PSHHQSRQEAPSHHSGGMPPY--PMHPFRPNPPM 463
Query: 268 ---------------------LGAARVPDLQGYADTG----------NTW---------- 286
+GA R+P G G TW
Sbjct: 464 GPFDVADPRPPGPPPSHPMEHMGADRMPYPYGCEQGGPRPFVEQPSPRTWAPEAPATDAP 523
Query: 287 ---PVYSTGLSLVSGLVGASQSE-----ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASG 338
P + G V +S+++ V+ P IG V G G + I++ SG
Sbjct: 524 RSMPDTVPAVDFRKGPVSSSENQVATPATTTTEVVIPCKYIGFVCGTNGSDLDEIKKISG 583
Query: 339 AQIDVDDTK 347
A I V D K
Sbjct: 584 AAITVHDPK 592
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 95/226 (42%), Gaps = 43/226 (19%)
Query: 389 VTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDK--PKCADANDELVEVVGEV 446
V R+L + +GC++GK G + +R+ + A +R+ + + P CA DEL+ + G
Sbjct: 110 VGCRMLAAGGQVGCVLGKGGKTVERMRQESGAQIRVFRNREQVPPCALQGDELIHISGSF 169
Query: 447 GSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYD 506
+ R AL+ + L+D+ D PS P GP
Sbjct: 170 SAARKALLLVSTCLQDNPRPDTSN-----------------------FPSGRPFGP---- 202
Query: 507 QRADSGSGIGMLSSSSLYGYGS-LSMGDSPYGSMSSYSSKLYGGLPPP-------LTLEV 558
GSG+G + S L P ++SS G P P + +
Sbjct: 203 ----PGSGVGCPPGVDPHSQRSYLPPPHVPDYHARNFSSN--GAAPGPRFFVEQEIVFRM 256
Query: 559 LVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALIS 604
+ + VG VIGK GS + ++ +GA++++ D + +R+ +IS
Sbjct: 257 ICLNDMVGGVIGKGGSTIRALQSETGASVKVIDPVADSDERIIVIS 302
>gi|225455340|ref|XP_002272224.1| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
vinifera]
Length = 661
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 180/637 (28%), Positives = 295/637 (46%), Gaps = 102/637 (16%)
Query: 39 YRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEV 98
YRILC D G VIGKSG +I SIRQ T A + V + PG ++R++ I D
Sbjct: 69 YRILCHDVKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEI-------SDTRR 121
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRK------------EKEECQILV 146
D AQ+AL +H I + A + + +++V
Sbjct: 122 RDPEGRMPQFSPAQEALFMIHDRILESDAGFGNGFGGNGDDDDDFGPRGGGNRVATRMVV 181
Query: 147 PSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKK 206
++GK G I+++R +T+T I++ P+D + P C + V + G+ AVK
Sbjct: 182 SRMHVGCLLGKGGKIIEQMRIETKTQIRILPRDHNLP--RCVSMSEEIVQVVGDVNAVKN 239
Query: 207 ALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPI----LPSR 262
A+ IS+ + + R+ ++ +P P D Y P PI SR
Sbjct: 240 AIANISSRLRESQHRDRSHFHGRIQSSPERFFPPDDD--YSHMNNAPRRMPIDGNSFGSR 297
Query: 263 SVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLV----GASQ--SEELVIRVLCPF 316
++G N++ ++G +L SG A Q E++V R+LCP
Sbjct: 298 VSTGLVGT-----------RSNSFASRTSGYTLESGAAPIADNAQQFLGEDIVFRILCPV 346
Query: 317 NKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVLL 376
+K+ V+G+ G I+ ++ G + V D +E +I +T+ E PDD A EA+L
Sbjct: 347 DKVECVVGESDGIIELLQNEIGVDVKVADHVAGSNEQIIVITSEEGPDDELFPAQEALLH 406
Query: 377 LQTKIND---EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDK-PKC 432
+QT+I + + ++ +T RLLV S IGC G+ S ++E+R+ T A+++I ++ P
Sbjct: 407 IQTRIVNLLPDKENVITTRLLVPSSEIGCFEGRDCS-LSEMRRLTGANIQIVPREQLPAF 465
Query: 433 ADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSGTGISMPP 492
DEL+E+VGE+ + RDALV++ RLR ++Y MPP
Sbjct: 466 ISGTDELLEIVGEIKAARDALVEVTSRLR-----------------SYLYREFFPKDMPP 508
Query: 493 LLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYS----SKLYG 548
PSI G L A S + I + + G+ + + Y ++ + + SK G
Sbjct: 509 --PSISAPGSL----EASSPNNI----TPAREGHTASDPPTTNYQNVQAIASVQPSKDSG 558
Query: 549 G------------------LPPPL----TLEVLVPANAVGKVIGKAGSNLANIRKISGAT 586
G +P L TLEV++P +AV K+I ++ + LA I + SGA
Sbjct: 559 GTGGETVKQNETVPSVLNRIPVTLVTRSTLEVVIPEHAVPKLITRSKNKLAQISEWSGAN 618
Query: 587 IEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFIMA 623
+ + + + ++ ISGTPEQ A++L+Q FI++
Sbjct: 619 VTLLEDRLEATGKIIQISGTPEQTEKAQSLLQGFILS 655
>gi|326512112|dbj|BAJ96037.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 541
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 164/492 (33%), Positives = 258/492 (52%), Gaps = 60/492 (12%)
Query: 5 GKRYRSQRDNDRDGKNQKRRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQ 64
GKR Q D +G ++R + + +YR LC IGS+IG+ G++ +R
Sbjct: 11 GKR---QSDYSENGGGKRRNPGDDTYAPGPDDTVYRYLCTSRKIGSIIGRGGEIAKQLRS 67
Query: 65 ETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIAN 124
+T+A++++ + P +RV+TI+S ++ +E + ++ +C AQDAL +VH +
Sbjct: 68 DTQAKIRIGESVPACDERVITIFSSSRETNTIE-----DTEDKVCPAQDALFRVHEKL-- 120
Query: 125 AVANATDNDKKRKEKEE------CQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPK 178
ATD+ KE EE ++LVPS Q IIGK G I+ +RS T + I+V
Sbjct: 121 ----ATDDGPVNKENEESLGQVTVRLLVPSDQIGCIIGKGGHIIQGIRSDTGSQIRVL-- 174
Query: 179 DASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSII 238
++E CA D +LI+G+ V+KAL +S+ ++ R L +++ +
Sbjct: 175 -SNEHLPLCATSGDELLLITGDPMVVRKALLQVSSRLHGNPSRSQHLLASSLNQP----- 228
Query: 239 IPSDVPIYPPGGLYPNADPILPSRSVPSILGAARV--PDLQGYADTGNTWPVYSTGLSLV 296
+P G L S S ++G + P + D WP S+
Sbjct: 229 -------FPVGSR-------LGSSSTAPVVGITPMVSPYGRYKGDMVGDWP------SIY 268
Query: 297 SGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVIT 356
S +E +R+LC +G VIGKGGG IK IRQ SGA I V D+ D+C+IT
Sbjct: 269 QPRREVSSPKEFSLRLLCAAANVGGVIGKGGGIIKQIRQESGAFIKV-DSSSAEDDCIIT 327
Query: 357 VTAIESPDDIKSMAVEAVLLLQTKINDEDDD-----TVTIRLLVSSKVIGCIIGKSGSII 411
V+A E +D S ++A + LQ + +++ D + T RLLVS+ IGC+IGK GSII
Sbjct: 328 VSAKEFFEDPVSPTIDATVRLQPRCSEKIDAESGEPSYTTRLLVSTSRIGCLIGKGGSII 387
Query: 412 NEIRKRTKADVR-ISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDG 470
EIR+ ++A++R ISK D PK A ++E+V + G++ R AL+QI RL+ + +R+G
Sbjct: 388 TEIRRTSRANIRIISKQDVPKVASDDEEMVLISGDLDFARHALLQITTRLKANFF-EREG 446
Query: 471 SRN--PPVGADH 480
+ + PPV H
Sbjct: 447 ALSGFPPVIPYH 458
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 105/319 (32%), Positives = 149/319 (46%), Gaps = 47/319 (14%)
Query: 306 EELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITV-------T 358
++ V R LC KIG +IG+GG K +R + A+I + ++ DE VIT+
Sbjct: 38 DDTVYRYLCTSRKIGSIIGRGGEIAKQLRSDTQAKIRIGESVPACDERVITIFSSSRETN 97
Query: 359 AIESPDDIKSMAVEAVLLLQTKI----------NDEDDDTVTIRLLVSSKVIGCIIGKSG 408
IE +D A +A+ + K+ N+E VT+RLLV S IGCIIGK G
Sbjct: 98 TIEDTEDKVCPAQDALFRVHEKLATDDGPVNKENEESLGQVTVRLLVPSDQIGCIIGKGG 157
Query: 409 SIINEIRKRTKADVRI-SKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKD 467
II IR T + +R+ S P CA + DEL+ + G+ VR AL+Q+ RL +
Sbjct: 158 HIIQGIRSDTGSQIRVLSNEHLPLCATSGDELLLITGDPMVVRKALLQVSSRLHGN---- 213
Query: 468 RDGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGP-LGYDQRADSGSGIGMLSSSSLYG- 525
P + H+ +S PVG LG A +G+ S YG
Sbjct: 214 -------PSRSQHLLASSLNQPF--------PVGSRLGSSSTAPV---VGITPMVSPYGR 255
Query: 526 YGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGA 585
Y +GD P S Y + P +L +L A VG VIGK G + IR+ SGA
Sbjct: 256 YKGDMVGDWP----SIYQPRREVSSPKEFSLRLLCAAANVGGVIGKGGGIIKQIRQESGA 311
Query: 586 TIEMSDSKSSRGDRVALIS 604
I++ DS S+ D + +S
Sbjct: 312 FIKV-DSSSAEDDCIITVS 329
>gi|224116388|ref|XP_002317285.1| predicted protein [Populus trichocarpa]
gi|222860350|gb|EEE97897.1| predicted protein [Populus trichocarpa]
Length = 165
Score = 198 bits (503), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 108/142 (76%), Positives = 120/142 (84%)
Query: 369 MAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGD 428
MAVEA+LLLQ KINDEDDDTV RLLV SKVIGCIIGK GS INEIRKRT ADVRISKG
Sbjct: 1 MAVEAILLLQGKINDEDDDTVGCRLLVLSKVIGCIIGKGGSTINEIRKRTNADVRISKGA 60
Query: 429 KPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSGTGI 488
KP CAD+NDELVEVVGEV SVRDALVQI+LRLRDD LK++DG N VG D +Y G G+
Sbjct: 61 KPNCADSNDELVEVVGEVSSVRDALVQIVLRLRDDVLKEKDGGLNSLVGTDSVYPVGAGL 120
Query: 489 SMPPLLPSIPPVGPLGYDQRAD 510
S+P +LPS+PPV P+GYDQRA+
Sbjct: 121 SIPSILPSVPPVAPMGYDQRAE 142
>gi|297847528|ref|XP_002891645.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297337487|gb|EFH67904.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 622
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 180/663 (27%), Positives = 300/663 (45%), Gaps = 134/663 (20%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVD--PFPGAKDRVVTIYSHVKD 92
ESV +R+LCP G++IGK G VI ++ T ++++V+D P P + V+ I K
Sbjct: 17 ESVHFRLLCPAARTGAIIGKGGSVIRHLQSVTGSKIRVIDDIPVPSEERVVLIIAPSGKK 76
Query: 93 KEDVEVDDEFN---------------------DKEPLCAAQDALLKVHAAIANAV-ANAT 130
K+D V D N D+E +AQ ALL+V I A +
Sbjct: 77 KDDSNVFDSENPSSEEPKQEKGSECAGTSGGDDEEAPSSAQMALLRVLERIVFGDDAASV 136
Query: 131 DNDKKRKEKEE--CQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCA 188
D D K + E C+++V +Q ++ K G I+R+R + ++++ D P CA
Sbjct: 137 DGDGLDKGESESLCRMIVRGNQVDFLMSKGGKMIQRIREDSGAIVRISSTDQIPP---CA 193
Query: 189 MEFDNFVL--ISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSI-IIPSDVPI 245
D + I+G+ +VKKAL I+ + + APP+ P P
Sbjct: 194 FPGDVVIQMKITGKFSSVKKALLLITNCLQESG-------------APPTWDECPFPQPG 240
Query: 246 YPPG----GLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVG 301
YPP +P D P +P + P ++
Sbjct: 241 YPPDYHSMEYHPQWD--HPPNPMPEDVVPFNRPVVE------------------------ 274
Query: 302 ASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIE 361
EE+ R+LCP +K+G +IGKGG +++++ SGA I V D + +E +I ++A E
Sbjct: 275 ----EEVSFRLLCPADKVGSLIGKGGAVVRALQNESGASIKVSDPTHDSEERIIVISARE 330
Query: 362 SPDDIKSMAVEAVLLLQTKIND---EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRT 418
+ + S+A + V+ + +I + E V RLLV S IG ++GK G +I+E+R+ T
Sbjct: 331 NLERRHSLAQDGVMRVHNRIVEIGFEPSAAVVARLLVHSPYIGRLLGKGGHLISEMRRAT 390
Query: 419 KADVRISKGDKP-KCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDR--------- 468
A +R+ D+ K +DE+V+V+G + +V+DAL QI+ RLR+ R
Sbjct: 391 GASIRVFAKDQATKYESQHDEIVQVIGNLKTVQDALFQILCRLREAMFPGRLPFQGLGGP 450
Query: 469 -----------------------DGSRNPPVGADH-IYSSGTGISMPPLLPSIPPVGPLG 504
+ PVG+ H + G G PP P P+
Sbjct: 451 PPPFMGPYPEPPPPFGPRQYPASPDRYHSPVGSFHERHCHGPGFDRPPGPGFDRPPSPMS 510
Query: 505 YD-QRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLT---LEVLV 560
+ Q G GM+ +G+ ++ + P GS + P +T +E+++
Sbjct: 511 WTPQPGIDGHPGGMVPPDVNHGF---ALRNEPIGSEN-----------PAMTSANVEIVI 556
Query: 561 PANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAF 620
P +G V G+ SNL I+++SGA + + D K+ + + ++SGT +Q A++L+ AF
Sbjct: 557 PQAYLGHVYGENCSNLNYIKQVSGANVVVHDPKAGATEGLVVVSGTSDQAHFAQSLLHAF 616
Query: 621 IMA 623
I+
Sbjct: 617 ILC 619
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 87/178 (48%), Gaps = 22/178 (12%)
Query: 34 EESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDK 93
EE V +R+LCP +GS+IGK G V+ +++ E+ A +KV DP +++R++ I + +
Sbjct: 274 EEEVSFRLLCPADKVGSLIGKGGAVVRALQNESGASIKVSDPTHDSEERIIVISA----R 329
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
E++E AQD +++VH I + R +LV S
Sbjct: 330 ENLERRHSL--------AQDGVMRVHNRIVEIGFEPSAAVVAR-------LLVHSPYIGR 374
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAI 211
++GK G I +R T SI+V KD + S + D V + G + V+ ALF I
Sbjct: 375 LLGKGGHLISEMRRATGASIRVFAKDQATKYES---QHDEIVQVIGNLKTVQDALFQI 429
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 93/212 (43%), Gaps = 51/212 (24%)
Query: 302 ASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDV-DDTKDNRDECVITVTA- 359
A+ +E + R+LCP + G +IGKGG I+ ++ +G++I V DD +E V+ + A
Sbjct: 13 ATAAESVHFRLLCPAARTGAIIGKGGSVIRHLQSVTGSKIRVIDDIPVPSEERVVLIIAP 72
Query: 360 ------------IESP---------------------DDIKSMAVEAVLLLQTKINDEDD 386
E+P ++ S A A+L + +I DD
Sbjct: 73 SGKKKDDSNVFDSENPSSEEPKQEKGSECAGTSGGDDEEAPSSAQMALLRVLERIVFGDD 132
Query: 387 DTVT-------------IRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDK-PKC 432
R++V + ++ K G +I IR+ + A VRIS D+ P C
Sbjct: 133 AASVDGDGLDKGESESLCRMIVRGNQVDFLMSKGGKMIQRIREDSGAIVRISSTDQIPPC 192
Query: 433 ADANDELVE--VVGEVGSVRDALVQIILRLRD 462
A D +++ + G+ SV+ AL+ I L++
Sbjct: 193 AFPGDVVIQMKITGKFSSVKKALLLITNCLQE 224
>gi|449436912|ref|XP_004136236.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
gi|449522219|ref|XP_004168125.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 693
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 210/712 (29%), Positives = 326/712 (45%), Gaps = 130/712 (18%)
Query: 7 RYRSQRDNDRDGKNQK----RRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSI 62
R RS ++ GK QK R + K + ++R+L P I S++G+ G ++ I
Sbjct: 12 RDRSSVKSNGKGKWQKSSGSRSRRNQSFKLSPGYAVFRVLFPVSRIDSLVGRDGDGLSKI 71
Query: 63 RQETRARVKVVDPFPGAKDRVVTI---------YSHVKDKED-----VEVDD-------- 100
R+ET ++V D PG +R+ I K KED VE +D
Sbjct: 72 REETGVEIRVEDTIPGCDERIAVIGGSNQETEVNPEKKSKEDNKNSEVEENDGDIAKLKK 131
Query: 101 -EFNDKEPLCAAQDALLK--VHAAIANAV-------------ANATDNDKKRKEKEECQI 144
E D P+ +DA K H+ + A+ A+ TD + + ++
Sbjct: 132 KEDKDSPPV---EDAKQKEVTHSQLRKALFLVSEKIFDEEPEADGTDVEGDKLPTFILRL 188
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAV 204
LV SSQ ++GK G+ +K++ S + I++ P+D P + +E V ISG + V
Sbjct: 189 LVLSSQVGCLLGKGGSVVKQMSSDSGAQIRILPRDKLPPFVATNVEL---VQISGGIDVV 245
Query: 205 KKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIY--PPGGLYPNADPILPSR 262
KKAL + + + P + P+ ++ S + P G +
Sbjct: 246 KKALELVFQQLIENPPNDKDPVASSNAAQSSRSSGQSLSRAHESPRGSSFNTHG------ 299
Query: 263 SVPSILGAARVPDLQGYADTGNTWPVYSTGLSLV-----SGLVGASQ--SEELVIRVLCP 315
G VP D GN +S+ SL + + G S+ E L R+LCP
Sbjct: 300 ------GPYSVP-----RDVGN---FHSSAPSLAPKQYEACIPGRSKPSHEILSYRLLCP 345
Query: 316 FNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVL 375
++G VIGKGG +K+++Q +G I V D + ++ +I V PDD S +AV
Sbjct: 346 TERVGNVIGKGGAIVKTLQQDTGCDIKVVDGALDSEDRIILVAGPAHPDDRISPVQDAVF 405
Query: 376 LLQTKI----NDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRI-SKGDKP 430
+Q +I D + + R LVSS IGC++GK GSII E+RK T A +RI K P
Sbjct: 406 RVQARIVKAAADSKEQNLVARFLVSSNQIGCLLGKGGSIIAEMRKSTGAYIRILGKEQIP 465
Query: 431 KCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSGTGISM 490
KCA ++E+V++ GE +V+DA+ QI RLR +D S N +S+ I
Sbjct: 466 KCAGEDEEVVQINGEPETVQDAMFQITTRLRHHFFRDAFPSVNS-------HSNPAFIDR 518
Query: 491 PPLLPSI-------PP-----VGPLGYDQRADSGSGIGMLSS------SSLYGYGSLSMG 532
P PS PP +GP + + D+ SGI LS L+ G+ +
Sbjct: 519 LPSFPSYFGRRELSPPGIYSSLGPSFH--KFDALSGIPSLSDLRDDRPPFLHRPGAPLLS 576
Query: 533 D-SPYGS---------MSSYSSKLY-------GGLPPPL----TLEVLVPANAVGKVIGK 571
D P+ S +S ++ + GG P + T+EV+VP N V + G+
Sbjct: 577 DRKPWSSQGLVEGGVGLSDFAGAHHRRIAGFGGGNSPAIITSTTVEVVVPRNIVPVICGE 636
Query: 572 AGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFIMA 623
G L IR+IS A I +++ K + + +ISGTPEQ AA++LIQAF+++
Sbjct: 637 NGECLKQIRQISDAKITITEPKQGDVETMIIISGTPEQTHAAQSLIQAFVIS 688
>gi|413953981|gb|AFW86630.1| hypothetical protein ZEAMMB73_253509 [Zea mays]
Length = 667
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 170/609 (27%), Positives = 290/609 (47%), Gaps = 64/609 (10%)
Query: 39 YRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEV 98
+RILCP+ G + +R ++ A V V PF G RV+ + + D
Sbjct: 91 FRILCPEC---KAYGFPPGFVAKVRDDSGALVTVHPPFAGDYVRVIETVDGARREAD--- 144
Query: 99 DDEFNDKEPLCA-AQDALLKVHAAIANAVANATD---------NDKKRKEKEECQILVPS 148
+ P+ + AQ+ALL VH I A+ D D + + K +++VP
Sbjct: 145 -----GRPPMFSPAQEALLMVHRRILETDADDGDEDGEYGPRGKDSRDRGKTTTRLIVPK 199
Query: 149 SQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKAL 208
++GK G I+++R +T+T I++ P+D P C + V + G+ VKKA+
Sbjct: 200 MHVGCLLGKGGKIIEQMRMETKTHIRILPRDQHTP--RCVSLSEEVVQVVGDGNCVKKAV 257
Query: 209 FAISAIMYKFSPREDIPLETTVREAPPSI------IIPSDVPIYPPGGLYPNADPILPSR 262
I+ + + R+ P + P I + S +P Y +D I +
Sbjct: 258 AIITDRLKESLHRDRGPFRGRMNSPEPRISQEDDYLGVSQMPAYEES--LGRSDQIRNNT 315
Query: 263 SVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRV 322
S+ + GY N V L ++++ R+LCP +K+ +
Sbjct: 316 SM----------EPPGYEFDSNDGKVIEHPDILY---------DDIIFRILCPNDKVDNL 356
Query: 323 IGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKIN 382
+ G ++ ++ G + + D DE V+ +T+ E PD A EAVL +QT I
Sbjct: 357 VATNDGILEMLQADVGVDVRLSDIIAGSDERVVIITSREGPDHELFPAQEAVLHIQTHIV 416
Query: 383 D---EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRI-SKGDKPKCADANDE 438
D + D+ +T RLLV S I C G+ GS+ ++I+++T A+V+I K D P CA +DE
Sbjct: 417 DLGPDKDNIITTRLLVPSSEIACFDGREGSL-SDIQRQTSANVQILPKEDLPLCALESDE 475
Query: 439 LVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSGTGISMPPLLPSIP 498
L+++VGE+ + R+AL+Q+ +LR ++ G VG +++ + + ++ P P++
Sbjct: 476 LIQIVGEISAARNALIQVTTKLRSFLYREMSGPIQ--VGNINVHGAISPVAGSPGGPNLG 533
Query: 499 PVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPL---- 554
P+ +A + S GS G + + ++K + PL
Sbjct: 534 NDMPMSAYHQASQLATSWHSKDSGGSASGSFDQGSNIIDEIRQGATKRFA---VPLVTRS 590
Query: 555 TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAE 614
TLEV++P +AV + +AGS LA I +ISGAT+ +++ + ++V ISGTPEQ AE
Sbjct: 591 TLEVVIPNSAVASLTMRAGSKLAQISEISGATVTLAEDRPDILEKVVRISGTPEQASKAE 650
Query: 615 NLIQAFIMA 623
NL+Q FI++
Sbjct: 651 NLLQGFILS 659
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 91/188 (48%), Gaps = 23/188 (12%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKE 94
+ +I+RILCP+ + +++ + ++ ++ + V++ D G+ +RVV I S
Sbjct: 340 DDIIFRILCPNDKVDNLVATNDGILEMLQADVGVDVRLSDIIAGSDERVVIITSR----- 394
Query: 95 DVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANI 154
E D E L AQ+A+L + I + D D + +LVPSS+ A
Sbjct: 395 ------EGPDHE-LFPAQEAVLHIQTHIVDL---GPDKDNIITTR----LLVPSSEIACF 440
Query: 155 IGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAI 214
G+ G ++ ++ +T ++++ PK E CA+E D + I GE A + AL ++
Sbjct: 441 DGREG-SLSDIQRQTSANVQILPK---EDLPLCALESDELIQIVGEISAARNALIQVTTK 496
Query: 215 MYKFSPRE 222
+ F RE
Sbjct: 497 LRSFLYRE 504
>gi|357159179|ref|XP_003578365.1| PREDICTED: poly(rC)-binding protein 2-like [Brachypodium
distachyon]
Length = 629
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 172/578 (29%), Positives = 258/578 (44%), Gaps = 96/578 (16%)
Query: 111 AQDALLKVHAAIANAVANATDNDKKRKEKE-----ECQILVPSSQSANIIGKAGATIKRL 165
A A ++V + D + +EKE C++L Q ++GK G T++R+
Sbjct: 78 APAAAVRVWERVVGHRVGGDDAGEGEEEKEVTGVVGCRMLAAGGQVGCVLGKGGKTVERM 137
Query: 166 RSKTRTSIKVT-PKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDI 224
R ++ I+V KD P CA++ D + ISG A +KAL +S + +PR +
Sbjct: 138 RQESGAQIRVFRNKDQVPP---CALQGDELIHISGSFSAARKALLLVSTCLQD-NPRLET 193
Query: 225 PLETTVREAPPSIIIPSDVPIYPPG---GLYPNADPILPSRSVPSILGAARVPDLQGYAD 281
+T R PPG G P D S S S L +PD
Sbjct: 194 SNFSTGRS------------FGPPGSGVGCPPGVD----SHSQRSYL-PPHIPDYHARNF 236
Query: 282 TGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQI 341
+ N V + G +E+V R++C +G +IGKGG TI++++ +GA +
Sbjct: 237 SSN---VAAPGPRFFI-------EQEIVFRMICLNEMVGGIIGKGGATIRALQSDTGASV 286
Query: 342 DVDDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKINDEDDD---TVTIRLLVSSK 398
V D + DE VI ++A E+ + + S A +AVL + ++I++ D V RLLV S+
Sbjct: 287 KVIDAVADSDERVIVISARENSEMMHSPAQDAVLRVYSRISEASMDKSSAVPARLLVPSQ 346
Query: 399 VIGCIIGKSGSIINEIRKRTKADVRISKGDK-PKCADANDELVEVVGEVGSVRDALVQII 457
IGC++GK GSII E+R T A +RI ++ P+CA NDELV+V G S++DAL+ I
Sbjct: 347 HIGCLLGKGGSIIAEMRNVTGASIRIFGNEQIPRCAQRNDELVQVTGNFQSIQDALLHIT 406
Query: 458 LRLRDDALKDRDG-----SRNPPVGADHIYSS---------GTGISMPPLLPSIP--PVG 501
R+RD + + S PP G+ + S G+ P+ P P P+G
Sbjct: 407 GRIRDVIIPPKPHPSGGMSPYPPAGSTPHHPSRQDPAPPHHSGGMPPYPMHPFRPNHPMG 466
Query: 502 PLGYDQRADSGSGIG-----MLSSSSLYGYGSLSMGDSPY-------------------- 536
P G M + Y YG G P+
Sbjct: 467 PFDVADHRPPGQHPAHPMEHMGADRIPYSYGCEQGGPRPFLEQPSPRTWAPEAQTADAPR 526
Query: 537 ------GSMSSYSSKLYG-----GLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGA 585
+M S + G P T EV++P +G + G GS+LA I+KISGA
Sbjct: 527 SIPDKGLAMDSRKGSVAGSENQVATPTSTTTEVVIPCKYIGFICGTNGSDLAEIQKISGA 586
Query: 586 TIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFIMA 623
I + D K D + G PEQ + A++LI AFI
Sbjct: 587 AITVHDPKPGDTDASVFVCGDPEQTKKAQSLIHAFIFC 624
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 157/369 (42%), Gaps = 79/369 (21%)
Query: 34 EESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDK 93
E+ +++R++C + ++G +IGK G I +++ +T A VKV+D + +RV+ I + +
Sbjct: 250 EQEIVFRMICLNEMVGGIIGKGGATIRALQSDTGASVKVIDAVADSDERVIVISA----R 305
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
E+ E+ AQDA+L+V++ I+ A + + R +LVPS
Sbjct: 306 ENSEMMHS--------PAQDAVLRVYSRISEASMDKSSAVPAR-------LLVPSQHIGC 350
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAI-- 211
++GK G+ I +R+ T SI++ +E CA D V ++G ++++ AL I
Sbjct: 351 LLGKGGSIIAEMRNVTGASIRIF---GNEQIPRCAQRNDELVQVTGNFQSIQDALLHITG 407
Query: 212 -------------SAIMYKFSPREDIPLETTVRE-APPSIIIPSDVPIYPPGGLYPN--- 254
S M + P P + ++ APP +P YP PN
Sbjct: 408 RIRDVIIPPKPHPSGGMSPYPPAGSTPHHPSRQDPAPPHHS--GGMPPYPMHPFRPNHPM 465
Query: 255 -----ADPILPSRSVPS---ILGAARVPDLQGYADTG----------NTW-PVYST---- 291
AD P + +GA R+P G G TW P T
Sbjct: 466 GPFDVADHRPPGQHPAHPMEHMGADRIPYSYGCEQGGPRPFLEQPSPRTWAPEAQTADAP 525
Query: 292 ------GLSLVS--GLVGASQSE-----ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASG 338
GL++ S G V S+++ V+ P IG + G G + I++ SG
Sbjct: 526 RSIPDKGLAMDSRKGSVAGSENQVATPTSTTTEVVIPCKYIGFICGTNGSDLAEIQKISG 585
Query: 339 AQIDVDDTK 347
A I V D K
Sbjct: 586 AAITVHDPK 594
>gi|326490983|dbj|BAK05591.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 688
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 175/623 (28%), Positives = 292/623 (46%), Gaps = 83/623 (13%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKE 94
++ +RILCP+ G IN+ + ++ A + + PFPG RV+ D
Sbjct: 107 QTTSFRILCPES---KAYGFPASFINNAQDDSGAIITIHPPFPGDPVRVI----ETADGT 159
Query: 95 DVEVDDEFNDKEPLCA-AQDALLKVHAAIANAVANATDND---------KKRKEKEECQI 144
E D + P+ + AQ+ALL VH I + D D + + K ++
Sbjct: 160 LREADG----RPPMFSPAQEALLMVHRRILETQPDDGDEDGEYGPRGKDARDRGKVTTRL 215
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAV 204
+VP ++GK G I+++RS+T+T I++ P++ + P C + V + GE V
Sbjct: 216 IVPRQHVGCLLGKGGKIIEQMRSETKTHIRILPREQNMP--RCLSLSEKVVQVVGEGNNV 273
Query: 205 KKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSV 264
KKA+ IS + + R+ P R +P I +D Y GG +P+
Sbjct: 274 KKAVAIISDRLKESLHRDRGPF-LRGRNSPEHRISQADE--YLGGGQQ------MPAFEE 324
Query: 265 PSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQS-----EELVIRVLCPFNKI 319
P P + G+ P G S ++ +E++ R+LCP +K
Sbjct: 325 P-------YPRFDQIRNNGSMEP---PGYEFDSNGSKFNEHPEIPYDEIIFRILCPNDKA 374
Query: 320 GRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQT 379
++G G I ++ G + + D DE + +T+ E PD A EA+L +QT
Sbjct: 375 ISLVGSRDGIIDMLQAEVGVDVRLTDLIAGSDERTLIITSREGPDHELFPAQEALLHIQT 434
Query: 380 KIND---EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRI-SKGDKPKCADA 435
I D + D+ +T RLLV S I C G+ GS+ ++I+++T A+V+I + + P CA
Sbjct: 435 FIVDLGPDKDNIITTRLLVPSSEIACFEGRDGSL-SDIQRQTSANVQILPREELPSCALE 493
Query: 436 NDELVEVVGEVGSVRDALVQIILRLRDDALKDR-----------DGSRNPPVGADHIYSS 484
+DEL+++VGE+ + R+AL+Q+ +LR ++ GS +P G+ +
Sbjct: 494 SDELIQIVGEIRAARNALMQVTTKLRSYIYREMPAPIQIGGINVHGSISPAKGSPRGLYA 553
Query: 485 GTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSS 544
G + MP Q+A + S L GS G S M ++
Sbjct: 554 GNDLPMP-------------IYQQAPQMATSWHSKDSGLSASGSFEQGSSINDDMRQSNT 600
Query: 545 KLYGGLPPPL----TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRV 600
K Y PL TLEV++P +AV + +AGS LA I ++SGA++ +++ + ++V
Sbjct: 601 KRYAV---PLVTRSTLEVVIPQSAVASLSMRAGSKLAQISEMSGASVTLAEERPGVTEKV 657
Query: 601 ALISGTPEQKRAAENLIQAFIMA 623
ISGTPEQ A++L+Q FI++
Sbjct: 658 VRISGTPEQADKAQSLLQGFILS 680
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 88/379 (23%), Positives = 160/379 (42%), Gaps = 65/379 (17%)
Query: 24 RINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRV 83
+ NE E +E +I+RILCP+ S++G +I+ ++ E V++ D G+ +R
Sbjct: 351 KFNEHPEIPYDE-IIFRILCPNDKAISLVGSRDGIIDMLQAEVGVDVRLTDLIAGSDERT 409
Query: 84 VTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQ 143
+ I S E D E L AQ+ALL + I + + + R
Sbjct: 410 LIITSR-----------EGPDHE-LFPAQEALLHIQTFIVDLGPDKDNIITTR------- 450
Query: 144 ILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEA 203
+LVPSS+ A G+ G ++ ++ +T ++++ P+ E SCA+E D + I GE A
Sbjct: 451 LLVPSSEIACFEGRDG-SLSDIQRQTSANVQILPR---EELPSCALESDELIQIVGEIRA 506
Query: 204 VKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRS 263
+ AL ++ + + RE P I I GG+ + I P++
Sbjct: 507 ARNALMQVTTKLRSY----------IYREMPAPIQI---------GGINVHGS-ISPAKG 546
Query: 264 VPSILGAAR---VPDLQGYADTGNTWPVYSTGLSLVSGL-VGASQSEEL----------- 308
P L A +P Q +W +GLS G+S ++++
Sbjct: 547 SPRGLYAGNDLPMPIYQQAPQMATSWHSKDSGLSASGSFEQGSSINDDMRQSNTKRYAVP 606
Query: 309 -----VIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAI-ES 362
+ V+ P + + + + G + I + SGA + + + + E V+ ++ E
Sbjct: 607 LVTRSTLEVVIPQSAVASLSMRAGSKLAQISEMSGASVTLAEERPGVTEKVVRISGTPEQ 666
Query: 363 PDDIKSMAVEAVLLLQTKI 381
D +S+ +L +Q I
Sbjct: 667 ADKAQSLLQGFILSIQDDI 685
>gi|147845094|emb|CAN78473.1| hypothetical protein VITISV_026793 [Vitis vinifera]
Length = 709
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 200/661 (30%), Positives = 313/661 (47%), Gaps = 102/661 (15%)
Query: 9 RSQRDNDRDGKNQKR---RINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQE 65
RS D++ GK QK + K + +V++R+LCP GSVIGK G +I+ IRQE
Sbjct: 14 RSLTDSNGKGKWQKSGGFYSQNQSLKISPGTVVFRVLCPASKTGSVIGKGGTIISQIRQE 73
Query: 66 TRARVKVVDPFPGAKDRVVTIYSHVKDK-----------EDVEVDDEFND-KEP------ 107
T +V+V + G +RVV I KD ED + +E +D KEP
Sbjct: 74 TGVKVRVEETVSGCDERVVLITGSDKDTEADNEQSKEDGEDTKAAEEVSDTKEPGENDED 133
Query: 108 --------------LCAAQDALLKVHAAIANAVA--NATDNDKKRKEKEECQILVPSSQS 151
+ + Q ALL V +A + N D D + ++LV SSQ
Sbjct: 134 KESVPVEDSQVEKGISSVQKALLLVFERMAEGESETNGGDEDSNKSPTFVVRLLVLSSQV 193
Query: 152 ANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAI 211
++GK G+ IK++ +++ I++ P+D CA D V I+GE +A K+AL +I
Sbjct: 194 GCLLGKGGSVIKQMSAESGAQIRILPRDK---LPLCASPSDELVQITGELDACKQALQSI 250
Query: 212 SAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAA 271
S + + PR D + +T S + P P P + P++ P AA
Sbjct: 251 SQQLLENPPR-DYDIVSTNPTGSSSHLF---GPPLPRSEAQPPPNYSFPAQGAPY---AA 303
Query: 272 RVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEE-LVIRVLCPFNKIGRVIGKGGGTI 330
V D +++T + SG+ G + ++ L R+LC ++G +IGKGG I
Sbjct: 304 GVRDTDYHSNTPQLHKFHE------SGMPGXMKPQDILTFRLLCHDERVGGIIGKGGTII 357
Query: 331 KSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTK----INDEDD 386
K+++ +G +I V D + ++ VI ++ PDD S A +AVL +Q++ I D +
Sbjct: 358 KNLQNETGCEIKVLDGVPDSEDRVIFISGSAHPDDRISPAQDAVLRVQSRIVRAIPDSKE 417
Query: 387 DTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDK-PKCADANDELVEVVGE 445
TV RLLVSS IGC++GK G+II E+RK + A +RI D+ PKCA N+E+V++ GE
Sbjct: 418 KTVIARLLVSSTQIGCLLGKGGAIIAEMRKLSGAHIRILGKDQIPKCASENEEVVQINGE 477
Query: 446 VGSVRDALVQIILRLRDDALKDRDGSRNP--PVGADHI-----YSSGTGISMPPLLPSIP 498
+V++AL+QI RLR +D +P P D + Y + S P + ++
Sbjct: 478 FEAVQEALLQITTRLRHHHFRDAFSVNHPSNPAFTDQVPPFPPYLARREFSPPGMYSNLG 537
Query: 499 P----------VGPLG----YDQRADSGSGIGMLS----------SSSLYGYGSLSMGDS 534
P + P G +D RA I L SS+ +G+ L G
Sbjct: 538 PSFHKFDAVGVLHPHGGFHPHDDRAPFMHSIHRLGIPPHIPERKPSSAPWGHQGLIEGGV 597
Query: 535 PYGSMSSYSSKL------YGG-----LPPPLTLEVLVPANAVGKVIGKAGSNLANIRKIS 583
P G ++ ++ +GG + T+EV+VP + V + G+ G L IR+
Sbjct: 598 PIG-LADFAGGPQRRIPGFGGGNQQAIITSTTVEVVVPRSLVPSIYGEDGGCLRQIRQEV 656
Query: 584 G 584
G
Sbjct: 657 G 657
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 105/364 (28%), Positives = 156/364 (42%), Gaps = 86/364 (23%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQI-------------------------- 341
+V RVLCP +K G VIGKGG I IRQ +G ++
Sbjct: 45 VVFRVLCPASKTGSVIGKGGTIISQIRQETGVKVRVEETVSGCDERVVLITGSDKDTEAD 104
Query: 342 ---------------DVDDTKD--NRDECVITVTAIESPDDIKSMAVEAVLLL------- 377
+V DTK+ DE +V +S + +V+ LLL
Sbjct: 105 NEQSKEDGEDTKAAEEVSDTKEPGENDEDKESVPVEDSQVEKGISSVQKALLLVFERMAE 164
Query: 378 ---QTKINDEDDD---TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDK-P 430
+T DED + T +RLLV S +GC++GK GS+I ++ + A +RI DK P
Sbjct: 165 GESETNGGDEDSNKSPTFVVRLLVLSSQVGCLLGKGGSVIKQMSAESGAQIRILPRDKLP 224
Query: 431 KCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRD-GSRNPPVGADHIYSSGTGIS 489
CA +DELV++ GE+ + + AL I +L ++ +D D S NP + H++
Sbjct: 225 LCASPSDELVQITGELDACKQALQSISQQLLENPPRDYDIVSTNPTGSSSHLFG------ 278
Query: 490 MPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLY-- 547
P LP P Y A Y G + D+ Y S + K +
Sbjct: 279 --PPLPRSEAQPPPNYSFPAQGAP----------YAAG---VRDTDYHSNTPQLHKFHES 323
Query: 548 ---GGLPPP--LTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVAL 602
G + P LT +L VG +IGK G+ + N++ +G I++ D DRV
Sbjct: 324 GMPGXMKPQDILTFRLLCHDERVGGIIGKGGTIIKNLQNETGCEIKVLDGVPDSEDRVIF 383
Query: 603 ISGT 606
ISG+
Sbjct: 384 ISGS 387
Score = 42.0 bits (97), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 34/56 (60%)
Query: 551 PPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGT 606
P + VL PA+ G VIGK G+ ++ IR+ +G + + ++ S +RV LI+G+
Sbjct: 42 PGTVVFRVLCPASKTGSVIGKGGTIISQIRQETGVKVRVEETVSGCDERVVLITGS 97
>gi|224098894|ref|XP_002311309.1| predicted protein [Populus trichocarpa]
gi|222851129|gb|EEE88676.1| predicted protein [Populus trichocarpa]
Length = 447
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 151/477 (31%), Positives = 247/477 (51%), Gaps = 69/477 (14%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKE 94
E +YR LCP IGS+IGK G++ +R ++++ +++ + PG +RVVTI+S ++
Sbjct: 8 EDTVYRYLCPLRKIGSIIGKGGEIAKQLRADSKSNIRISEAMPGYDERVVTIFSSSEETN 67
Query: 95 DVEVDDEFNDKEPLCAAQDALLKVH-AAIANAVANATDNDKKRKEKE-ECQ-----ILVP 147
E E+ +C AQDAL VH IA + NA +++ +++ E Q +LVP
Sbjct: 68 LFEDTGEY-----VCPAQDALFMVHDRVIAEDLNNAAAAEEEEEDRFGEVQQVTVRMLVP 122
Query: 148 SSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKA 207
+ Q +IGK G I+ +RS+TR I++T + P A+ D +LI GE V+KA
Sbjct: 123 TDQIGCVIGKGGQVIQNIRSETRAQIRITKDEHLPP---LALSTDELLLIHGEPSVVRKA 179
Query: 208 LFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSI 267
L+ ++ +++ R +++ S Y GG++ A+
Sbjct: 180 LYQVATRLHENPSRSQ------------HLLLSSSANTYQSGGMFVTAN----------- 216
Query: 268 LGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGG 327
A P L Y + +W S + +++ +R++CP IG VIGKGG
Sbjct: 217 ---AGAPLLGLYGNYKGSWSS-----SFYPDQRDEASAKDFSLRLVCPIANIGGVIGKGG 268
Query: 328 GTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKINDED-- 385
G IK IRQ S A I VD + ++C+I ++A E +D +S + A L +Q + +++
Sbjct: 269 GIIKQIRQESRASIKVDSSGAEGNDCIIFISAKEFFED-QSPTMNAALRMQPRCSEKTEK 327
Query: 386 ---DDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVR-ISKGDKPKCADANDELVE 441
D +T RLLV IGC++GK G+II+E+R T+A++R IS+ + PK A +DE+V+
Sbjct: 328 ESGDSVITTRLLVGRSQIGCLMGKGGAIISEMRNLTRANIRIISEDNLPKVAGEDDEMVQ 387
Query: 442 VVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSGTGISMPPLLPSIP 498
+ G + +AL+Q+ILRL+ + RDG+ + PP LP IP
Sbjct: 388 ITGSLEVASNALLQVILRLKANIF-GRDGALT---------------TFPPALPYIP 428
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 94/184 (51%), Gaps = 25/184 (13%)
Query: 305 SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTA----- 359
+E+ V R LCP KIG +IGKGG K +R S + I + + DE V+T+ +
Sbjct: 7 NEDTVYRYLCPLRKIGSIIGKGGEIAKQLRADSKSNIRISEAMPGYDERVVTIFSSSEET 66
Query: 360 --IESPDDIKSMAVEAVLLLQTKINDEDDDT-----------------VTIRLLVSSKVI 400
E + A +A+ ++ ++ ED + VT+R+LV + I
Sbjct: 67 NLFEDTGEYVCPAQDALFMVHDRVIAEDLNNAAAAEEEEEDRFGEVQQVTVRMLVPTDQI 126
Query: 401 GCIIGKSGSIINEIRKRTKADVRISKGDK-PKCADANDELVEVVGEVGSVRDALVQIILR 459
GC+IGK G +I IR T+A +RI+K + P A + DEL+ + GE VR AL Q+ R
Sbjct: 127 GCVIGKGGQVIQNIRSETRAQIRITKDEHLPPLALSTDELLLIHGEPSVVRKALYQVATR 186
Query: 460 LRDD 463
L ++
Sbjct: 187 LHEN 190
Score = 45.4 bits (106), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
Query: 29 DEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVD-----PFPGAKDRV 83
D G + V R+L P IG VIGK G+VI +IR ETRA++++ P + D +
Sbjct: 107 DRFGEVQQVTVRMLVPTDQIGCVIGKGGQVIQNIRSETRAQIRITKDEHLPPLALSTDEL 166
Query: 84 VTIY 87
+ I+
Sbjct: 167 LLIH 170
Score = 40.0 bits (92), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 83/192 (43%), Gaps = 34/192 (17%)
Query: 26 NEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVT 85
+++DE ++ + R++CP IG VIGK G +I IRQE+RA +KV D ++
Sbjct: 239 DQRDEASAKDFSL-RLVCPIANIGGVIGKGGGIIKQIRQESRASIKVDSSGAEGNDCIIF 297
Query: 86 IYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEE---- 141
I + F D+ P NA ++ EKE
Sbjct: 298 I----------SAKEFFEDQSP--------------TMNAALRMQPRCSEKTEKESGDSV 333
Query: 142 --CQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISG 199
++LV SQ ++GK GA I +R+ TR +I++ +D A E D V I+G
Sbjct: 334 ITTRLLVGRSQIGCLMGKGGAIISEMRNLTRANIRIISEDN---LPKVAGEDDEMVQITG 390
Query: 200 ESEAVKKALFAI 211
E AL +
Sbjct: 391 SLEVASNALLQV 402
Score = 38.9 bits (89), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 40/69 (57%), Gaps = 6/69 (8%)
Query: 24 RINEKDEKGNEESVIY-RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV--DPFP--- 77
R +EK EK + +SVI R+L IG ++GK G +I+ +R TRA ++++ D P
Sbjct: 320 RCSEKTEKESGDSVITTRLLVGRSQIGCLMGKGGAIISEMRNLTRANIRIISEDNLPKVA 379
Query: 78 GAKDRVVTI 86
G D +V I
Sbjct: 380 GEDDEMVQI 388
>gi|449492545|ref|XP_004159029.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 716
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 180/684 (26%), Positives = 306/684 (44%), Gaps = 137/684 (20%)
Query: 37 VIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIY-------SH 89
++R+LCP + S++ +R AR+ V +P P ++ V+ I +H
Sbjct: 68 TLFRLLCPASKVSSIL-------RHLRDIPGARIHVDEPLPSCEECVLVILAGSPSKPTH 120
Query: 90 VK---DKEDVEVDDEFN--------DKEPLCAAQDALLKVHAAIANAVANATDNDKKRKE 138
D+E E D N D + AQ ALL+ +I ++ +N + +K+
Sbjct: 121 TNPGNDREFREHDVHRNVSSDTVAGDSDERSQAQQALLRTFESIVRMNEDSGENQEIQKK 180
Query: 139 KEE-----------------CQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+ C++L PS Q ++G+ G T++++R ++ +K+ PKD +
Sbjct: 181 NADSAPNDRISGGETDGLVVCRLLAPSHQVGRVLGRGGKTVEKIRQESMAHVKIFPKDQN 240
Query: 182 EPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSIII-- 239
+CA D + ISG AV KAL ++S+ + + SPR D ++ + P+
Sbjct: 241 P---ACASPQDELIQISGNFSAVMKALSSVSSCL-QDSPRVDSSNSSSTKSLGPTSHASS 296
Query: 240 -------PSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTWPVYSTG 292
PS Y G + NAD SRS SI G + P
Sbjct: 297 MSVQDEEPSPRRRY---GSHHNAD--YRSRSYSSIPGH----------ENAGAGPR---- 337
Query: 293 LSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDE 352
A+ E++V R+LC +K+G +IGKGG +++++ +GA I + DT D DE
Sbjct: 338 ---------AAMEEDVVFRLLCQPDKVGSLIGKGGTVVRALQNETGASIKIVDTPD-LDE 387
Query: 353 CVITVTAIESPDDIKSMAVEAVLLLQTKIND---EDDDTVTIRLLVSSKVIGCIIGKSGS 409
++ ++A E+ + S A EAV+ +I + E V RLLV + IG ++G+ G
Sbjct: 388 RLVVISARETLEQTYSPAQEAVIRAHCRIAEIGYEPGAAVVARLLVHGQQIGYLVGRGGH 447
Query: 410 IINEIRKRTKADVRISKGDK-PKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDR 468
IIN++R+ T ++I D+ +DE+V+V+G + SV+DAL I R+RD R
Sbjct: 448 IINDMRRGTGTSIQIFPRDQIQNGGPMSDEVVQVIGNLPSVQDALFHITNRIRDTFFPMR 507
Query: 469 ----DGSRNPPVGADH------IYSSGTGISMPPLLPSI---------PPV--GPL---- 503
+ + +PP + H ++ G+ P PS PP PL
Sbjct: 508 PHVPNFNNHPPYLSPHPETPPPLFRPGSNAHSPGYYPSQAGGLRGTERPPYHSHPLDHQP 567
Query: 504 GYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKL----------------- 546
Y G G M +G G S S++S++
Sbjct: 568 AYPHNVSFGGGNNMDGVPYPHGMERPGPGSFERPSPRSWTSQVSSEIPKGPTDGFGMVSR 627
Query: 547 ---YGGLPPPL----TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDR 599
YG P ++E+++P + + G+ +N+A++++ISGA + + D+K D
Sbjct: 628 NEPYGSGGPHFMGGTSMEMVIPQTLICHIYGENNNNIAHVQQISGAMLVVHDAKPGMFDG 687
Query: 600 VALISGTPEQKRAAENLIQAFIMA 623
++SGTP+Q RAA+ L+ AFI+
Sbjct: 688 KVIMSGTPDQIRAAQRLVHAFILC 711
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 119/268 (44%), Gaps = 33/268 (12%)
Query: 34 EESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDK 93
EE V++R+LC +GS+IGK G V+ +++ ET A +K+VD P +R+V I + +
Sbjct: 341 EEDVVFRLLCQPDKVGSLIGKGGTVVRALQNETGASIKIVD-TPDLDERLVVISA----R 395
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
E +E + AQ+A+++ H IA + ++LV Q
Sbjct: 396 ETLE--------QTYSPAQEAVIRAHCRIAEI-------GYEPGAAVVARLLVHGQQIGY 440
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISA 213
++G+ G I +R T TSI++ P+D + + D V + G +V+ ALF I+
Sbjct: 441 LVGRGGHIINDMRRGTGTSIQIFPRDQIQ---NGGPMSDEVVQVIGNLPSVQDALFHITN 497
Query: 214 -IMYKFSP-REDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAA 271
I F P R +P PP + S P PP P ++ P PS G
Sbjct: 498 RIRDTFFPMRPHVP---NFNNHPPYL---SPHPETPPPLFRPGSNAHSPGY-YPSQAGGL 550
Query: 272 RVPDLQGY-ADTGNTWPVYSTGLSLVSG 298
R + Y + + P Y +S G
Sbjct: 551 RGTERPPYHSHPLDHQPAYPHNVSFGGG 578
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 58/137 (42%), Gaps = 48/137 (35%)
Query: 2 GDSGKRYRSQ-----------RDNDRDGKNQKRRINEKDEKGNEE--------SVIYRIL 42
GDS +R ++Q R N+ G+NQ+ + D N+ V+ R+L
Sbjct: 145 GDSDERSQAQQALLRTFESIVRMNEDSGENQEIQKKNADSAPNDRISGGETDGLVVCRLL 204
Query: 43 CPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEF 102
P +G V+G+ GK + IRQE+ A VK+ FP
Sbjct: 205 APSHQVGRVLGRGGKTVEKIRQESMAHVKI---FP------------------------- 236
Query: 103 NDKEPLCAA-QDALLKV 118
D+ P CA+ QD L+++
Sbjct: 237 KDQNPACASPQDELIQI 253
>gi|449448150|ref|XP_004141829.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 716
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 180/684 (26%), Positives = 306/684 (44%), Gaps = 137/684 (20%)
Query: 37 VIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYS-------H 89
++R+LCP + S++ +R AR+ V +P P ++ V+ I + H
Sbjct: 68 TLFRLLCPASKVSSIL-------RHLRDIPGARIHVDEPLPSCEECVLVILAGSPSKPAH 120
Query: 90 VK---DKEDVEVDDEFN--------DKEPLCAAQDALLKVHAAIANAVANATDNDKKRKE 138
D+E E D N D + AQ ALL+ +I ++ +N + +K+
Sbjct: 121 TNPGNDREFREHDVHRNVSSDTVAGDSDERSQAQQALLRTFESIVRMNEDSGENQEIQKK 180
Query: 139 KEE-----------------CQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+ C++L PS Q ++G+ G T++++R ++ +K+ PKD +
Sbjct: 181 NADSAPNDRISGGETDGLVVCRLLAPSHQVGRVLGRGGKTVEKIRQESMAHVKIFPKDQN 240
Query: 182 EPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSIII-- 239
+CA D + ISG AV KAL ++S+ + + SPR D ++ + P+
Sbjct: 241 P---ACASPQDELIQISGNFSAVMKALSSVSSCL-QDSPRVDSSNSSSTKSLGPTSHASS 296
Query: 240 -------PSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTWPVYSTG 292
PS Y G + NAD SRS SI G + P
Sbjct: 297 MSVQDEEPSPRRRY---GSHHNAD--YRSRSYSSIPGH----------ENAGAGPR---- 337
Query: 293 LSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDE 352
A+ E++V R+LC +K+G +IGKGG +++++ +GA I + DT D DE
Sbjct: 338 ---------AAMEEDVVFRLLCQPDKVGSLIGKGGTVVRALQNETGASIKIVDTPD-LDE 387
Query: 353 CVITVTAIESPDDIKSMAVEAVLLLQTKIND---EDDDTVTIRLLVSSKVIGCIIGKSGS 409
++ ++A E+ + S A EAV+ +I + E V RLLV + IG ++G+ G
Sbjct: 388 RLVVISARETLEQTYSPAQEAVIRAHCRIAEIGYEPGAAVVARLLVHGQQIGYLVGRGGH 447
Query: 410 IINEIRKRTKADVRISKGDK-PKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDR 468
IIN++R+ T ++I D+ +DE+V+V+G + SV+DAL I R+RD R
Sbjct: 448 IINDMRRGTGTSIQIFPRDQIQNGGPMSDEVVQVIGNLPSVQDALFHITNRIRDTFFPMR 507
Query: 469 ----DGSRNPPVGADH------IYSSGTGISMPPLLPSI---------PPV--GPL---- 503
+ + +PP + H ++ G+ P PS PP PL
Sbjct: 508 PHVPNFNNHPPYLSPHPETPPPLFRPGSNAHSPGYYPSQAGGLRGTERPPYHSHPLDHQP 567
Query: 504 GYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKL----------------- 546
Y G G M +G G S S++S++
Sbjct: 568 AYPHNVSFGGGNNMDGVPYPHGMERPGPGSFERPSPRSWTSQVSSEIPKGPTDGFGMVSR 627
Query: 547 ---YGGLPPPL----TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDR 599
YG P ++E+++P + + G+ +N+A++++ISGA + + D+K D
Sbjct: 628 NEPYGSGGPHFMGGTSMEMVIPQTLICHIYGENNNNIAHVQQISGAMLVVHDAKPGMFDG 687
Query: 600 VALISGTPEQKRAAENLIQAFIMA 623
++SGTP+Q RAA+ L+ AFI+
Sbjct: 688 KVIMSGTPDQIRAAQRLVHAFILC 711
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 118/268 (44%), Gaps = 33/268 (12%)
Query: 34 EESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDK 93
EE V++R+LC +GS+IGK G V+ +++ ET A +K+VD P +R+V I + +
Sbjct: 341 EEDVVFRLLCQPDKVGSLIGKGGTVVRALQNETGASIKIVD-TPDLDERLVVISA----R 395
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
E +E + AQ+A+++ H IA R +LV Q
Sbjct: 396 ETLE--------QTYSPAQEAVIRAHCRIAEIGYEPGAAVVAR-------LLVHGQQIGY 440
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAIS- 212
++G+ G I +R T TSI++ P+D + + D V + G +V+ ALF I+
Sbjct: 441 LVGRGGHIINDMRRGTGTSIQIFPRDQIQ---NGGPMSDEVVQVIGNLPSVQDALFHITN 497
Query: 213 AIMYKFSP-REDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAA 271
I F P R +P PP + S P PP P ++ P PS G
Sbjct: 498 RIRDTFFPMRPHVP---NFNNHPPYL---SPHPETPPPLFRPGSNAHSPG-YYPSQAGGL 550
Query: 272 RVPDLQGY-ADTGNTWPVYSTGLSLVSG 298
R + Y + + P Y +S G
Sbjct: 551 RGTERPPYHSHPLDHQPAYPHNVSFGGG 578
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 58/137 (42%), Gaps = 48/137 (35%)
Query: 2 GDSGKRYRSQ-----------RDNDRDGKNQKRRINEKDEKGNEE--------SVIYRIL 42
GDS +R ++Q R N+ G+NQ+ + D N+ V+ R+L
Sbjct: 145 GDSDERSQAQQALLRTFESIVRMNEDSGENQEIQKKNADSAPNDRISGGETDGLVVCRLL 204
Query: 43 CPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEF 102
P +G V+G+ GK + IRQE+ A VK+ FP
Sbjct: 205 APSHQVGRVLGRGGKTVEKIRQESMAHVKI---FP------------------------- 236
Query: 103 NDKEPLCAA-QDALLKV 118
D+ P CA+ QD L+++
Sbjct: 237 KDQNPACASPQDELIQI 253
>gi|224112243|ref|XP_002316129.1| predicted protein [Populus trichocarpa]
gi|222865169|gb|EEF02300.1| predicted protein [Populus trichocarpa]
Length = 553
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 165/520 (31%), Positives = 259/520 (49%), Gaps = 82/520 (15%)
Query: 3 DSGKRYRSQRDNDRDGKNQKRRINEKDEKG-NEESVIYRILCPDGVIGSVIGKSGKVINS 61
D GKR + + + GK + + D+ E +YR LCP IGS+IGK G++
Sbjct: 7 DYGKRSQHSQSDYGGGKRRNPGDDPSDQNTITNEDTVYRYLCPLRKIGSIIGKGGEIAKQ 66
Query: 62 IRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVH-A 120
+R ++++ +++ + PG +R+VTIYS E+ + E E +C AQDAL VH
Sbjct: 67 LRADSKSNIRISEAMPGYDERIVTIYS---SSEETNLFGETG--EYVCPAQDALFMVHDR 121
Query: 121 AIANAVANATD------NDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIK 174
IA + NA ++ ++ ++LVP+ Q +IGK G I+ +RS+T I+
Sbjct: 122 VIAEDLNNAAAEEEEGEDNFGEVQQVTVRMLVPADQIGCVIGKGGQVIQNIRSETCAQIR 181
Query: 175 VTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAP 234
+T D P A+ D +LI GE AV+KAL+ ++ +++ R
Sbjct: 182 ITKDDHLPP---LALSIDELLLIHGEPSAVRKALYQVATRLHENPSRSQ----------- 227
Query: 235 PSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTWPVYSTGLS 294
+I+ S ++ GG++ A+ A P L Y + W S
Sbjct: 228 -HLILSSSANVH--GGVFVTAN--------------AGAPVLGLYGNYKGGWSS-----S 265
Query: 295 LVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECV 354
S ++E +R++CP IG VIGKGGG IK IRQ S A I VD + D+C+
Sbjct: 266 FYPDQRDESSTKEFSLRLVCPTANIGGVIGKGGGIIKQIRQESRASIKVDSSGAEGDDCI 325
Query: 355 ITVTAIESPDDIKSMAVEAVLLLQTKINDED-----DDTVTIRLLVSSKVIGCIIGKSGS 409
I ++A E +D +S + A L LQ + +D+ D +T RLLV IGC++GK G+
Sbjct: 326 IFISAKEFFED-QSPTMNAALRLQPRCSDKTEKESGDSVITTRLLVGRSQIGCLMGKGGA 384
Query: 410 IINEIRKRTKADVR-ISKGDKPKCADANDELVEV----------VGEVGSVRDALVQIIL 458
II+E+R +T+A++R IS+ + PK A +DE+V+V G + +AL+Q+IL
Sbjct: 385 IISEMRNQTRANIRIISEDNLPKVAVEDDEMVQVNVYNFNSVQITGSLEVASNALLQVIL 444
Query: 459 RLRDDALKDRDGSRNPPVGADHIYSSGTGISMPPLLPSIP 498
RL+ + L RDG+ + PP LP IP
Sbjct: 445 RLKAN-LFGRDGALT---------------AFPPALPYIP 468
>gi|356529691|ref|XP_003533422.1| PREDICTED: poly(rC)-binding protein 3-like [Glycine max]
Length = 611
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 165/606 (27%), Positives = 289/606 (47%), Gaps = 71/606 (11%)
Query: 37 VIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDV 96
+ +R++C ++G +IG SG +++ +R+ET ++ D A+DRV+ + V ++ +
Sbjct: 50 IAFRLVCHASIVGGLIGSSGSIVSQLRRETACKIHCEDSLSSAEDRVILVIGSVSPRKGL 109
Query: 97 EVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKE-ECQILVPSSQSANII 155
++ D + + +AQ+A+++V + A N + E ++L +SQ ++
Sbjct: 110 QLGD--GGEVEVSSAQEAIVRVFERVWGLEAEKGVNSNRAVNSEVFSKLLAHTSQIGAVV 167
Query: 156 GKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIM 215
GK G I +R+ T I+V P CA + + VLI+G AVKKAL ++S +
Sbjct: 168 GKGGKNITAIRNSTGAKIRVCPPP------QCATKDEELVLITGGILAVKKALISVSHCL 221
Query: 216 YKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPD 275
P +P+ +++ P++ P L+P + +L S SI
Sbjct: 222 QDCPPLCKVPVSSSI----PTVSSFDRSSSDPNAELFPRLNSLLTSMEGLSI-------- 269
Query: 276 LQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQ 335
Y T N+ + S E+V R+LC N G VIGK G ++++
Sbjct: 270 ---YERTTNS--------NESSNRDSKGGEHEVVFRLLCSNNVAGSVIGKRGAIVRALES 318
Query: 336 ASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKINDED---------- 385
+GA I E ++T++AIES + S A +AV+L+ +I ++
Sbjct: 319 KTGASIIFAAPLSEHAERIVTISAIESLESCNSPAQDAVILVFARIIEDHIGKGFLQVSS 378
Query: 386 -DDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDK-PKCADANDELVEVV 443
+ VT RLLV++ + G G +I E+R+ T AD++I G+ P A +D +V++
Sbjct: 379 MESPVTARLLVATSTVNSWSGNEGQVILELREVTGADIQILHGESVPNGASDDDVVVQIT 438
Query: 444 GEVGSVRDALVQIILRLRD-----DALKDRDGSRNPPVGADHIYSS--GTGISMPPLLPS 496
GE V++AL +I R+RD +A+ + N V D + G S P
Sbjct: 439 GEYRCVQNALYKITSRIRDNLSPNEAVTEARPKSNWKVNKDPVKGKPFSRGKSAFPSGRF 498
Query: 497 IPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTL 556
+P + + +G LS + G G++ + ++++ T+
Sbjct: 499 LPRNAGVHAETILQNGELHTDLSENLERGRGNM------FATVTNT------------TV 540
Query: 557 EVLVPANAVGKVIGKAGSNLANIRKISGATIEMSD-SKSSRGDRVALISGTPEQKRAAEN 615
E++V + G V G+ G NL IR+ISGAT+ + D S + G +V +ISGTP+Q AA++
Sbjct: 541 EIIVSEHVFGSVYGEDGGNLDRIRQISGATVTVYDPSVGTSGGKV-VISGTPDQTLAAQS 599
Query: 616 LIQAFI 621
L+QAFI
Sbjct: 600 LLQAFI 605
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 137/321 (42%), Gaps = 30/321 (9%)
Query: 28 KDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIY 87
+D KG E V++R+LC + V GSVIGK G ++ ++ +T A + P +R+VTI
Sbjct: 282 RDSKGGEHEVVFRLLCSNNVAGSVIGKRGAIVRALESKTGASIIFAAPLSEHAERIVTIS 341
Query: 88 SHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHA-AIANAVANATDNDKKRKEKEECQILV 146
+ +E + N AQDA++ V A I + + + ++LV
Sbjct: 342 A-------IESLESCNSP-----AQDAVILVFARIIEDHIGKGFLQVSSMESPVTARLLV 389
Query: 147 PSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKK 206
+S + G G I LR T I++ E + A + D V I+GE V+
Sbjct: 390 ATSTVNSWSGNEGQVILELREVTGADIQIL---HGESVPNGASDDDVVVQITGEYRCVQN 446
Query: 207 ALFAISA-IMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPS-RSV 264
AL+ I++ I SP E + T R P S + P+ G + PS R +
Sbjct: 447 ALYKITSRIRDNLSPNEAV---TEAR--PKSNWKVNKDPV--KGKPFSRGKSAFPSGRFL 499
Query: 265 PSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIG 324
P G LQ G S L G + A+ + V ++ + G V G
Sbjct: 500 PRNAGVHAETILQ----NGELHTDLSENLERGRGNMFATVTNTTV-EIIVSEHVFGSVYG 554
Query: 325 KGGGTIKSIRQASGAQIDVDD 345
+ GG + IRQ SGA + V D
Sbjct: 555 EDGGNLDRIRQISGATVTVYD 575
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 140/320 (43%), Gaps = 49/320 (15%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESP--- 363
++ R++C + +G +IG G + +R+ + +I +D+ + ++ VI V SP
Sbjct: 49 QIAFRLVCHASIVGGLIGSSGSIVSQLRRETACKIHCEDSLSSAEDRVILVIGSVSPRKG 108
Query: 364 ------DDIK-SMAVEAVLLLQTKI-----------NDEDDDTVTIRLLVSSKVIGCIIG 405
+++ S A EA++ + ++ N + V +LL + IG ++G
Sbjct: 109 LQLGDGGEVEVSSAQEAIVRVFERVWGLEAEKGVNSNRAVNSEVFSKLLAHTSQIGAVVG 168
Query: 406 KSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDAL 465
K G I IR T A +R+ P+CA ++ELV + G + +V+ AL+ + L+D
Sbjct: 169 KGGKNITAIRNSTGAKIRVCP--PPQCATKDEELVLITGGILAVKKALISVSHCLQD--- 223
Query: 466 KDRDGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQ-RADSGSGIGMLSSSSLY 524
PP + P+ SIP V +D+ +D + + +S L
Sbjct: 224 -------CPP------------LCKVPVSSSIPTVS--SFDRSSSDPNAELFPRLNSLLT 262
Query: 525 GYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISG 584
LS+ + S S + GG + +L N G VIGK G+ + + +G
Sbjct: 263 SMEGLSIYERTTNSNESSNRDSKGG-EHEVVFRLLCSNNVAGSVIGKRGAIVRALESKTG 321
Query: 585 ATIEMSDSKSSRGDRVALIS 604
A+I + S +R+ IS
Sbjct: 322 ASIIFAAPLSEHAERIVTIS 341
>gi|357485457|ref|XP_003613016.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355514351|gb|AES95974.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 596
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 163/608 (26%), Positives = 289/608 (47%), Gaps = 79/608 (12%)
Query: 37 VIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDV 96
+ +R++C +G +IG SG +++ +R+ET ++ D G DRV+ + + D++ +
Sbjct: 39 IAFRLVCHSSTVGGLIGSSGSIVSQLRRETGCKIHCEDAVVGTDDRVILVIGSMSDRKGI 98
Query: 97 EVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIG 156
+ D + + AQ+ +++V + +++K + ++L SSQ I+G
Sbjct: 99 VLGDR---EMEVSNAQEGVVRVFDRVW-----GLESEKGGNGEVYGKLLAHSSQVGAIVG 150
Query: 157 KAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMY 216
K G I +R+ + ++I+V P CA + + +LI+GES AVKKAL +S +
Sbjct: 151 KGGKNISNIRNNSGSNIRVCPAP------HCAAKDEELILITGESLAVKKALIYVSYCLQ 204
Query: 217 KFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDL 276
P + L T PP+I Y L+P+ + LPS SI A++
Sbjct: 205 DCPPMGKVSLNT-----PPTINSSDRSTSYTHEDLFPHLNSWLPSMEGLSINDASK---- 255
Query: 277 QGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQA 336
Q GN S L +V R+LC N G VIGK G +++
Sbjct: 256 QTTNANGN------------SSLDSKGSGHAVVFRLLCSNNVAGSVIGKKGSIVRTFEIR 303
Query: 337 SGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKINDED----------- 385
+GA I +E ++T++A E+ + S A +AV+L+ T+I ++
Sbjct: 304 TGASIVFAPPLGQYEERIVTISAFENLESSNSPAQDAVILVFTRIAEDHIRNGFQPATAV 363
Query: 386 DDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGE 445
+ VT RLL+++ + + G G +I+E+R+ + AD+++ G+ A ND +V++ G
Sbjct: 364 ESPVTARLLITTSTLHLLTGNEGQVISELRQVSGADIQLLHGEPIPNASDNDVVVQITGG 423
Query: 446 VGSVRDALVQIILRLRDDALKDR---DGSRNP--PVGADHIYS---SGTGISMPPLLPSI 497
V +AL +I +RD+ L + + P P+ D + S + S P +
Sbjct: 424 YRCVENALRKITSIIRDNPLTNELLAEAKIKPSFPLNKDTVRSKFITRKKSSFP--FARV 481
Query: 498 PPVGPLGYDQR--ADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLT 555
PP Y + ++G L + G G++ +++ ++ T
Sbjct: 482 PPQNAGVYQAKKVTENGESHTNLIENVEPGRGNI---------VATVTNT---------T 523
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSD--SKSSRGDRVALISGTPEQKRAA 613
+E++V + G V G+ G NL IR+ISGA + + D S + G +V +ISGTP+Q AA
Sbjct: 524 VEIIVSEHVFGSVYGEDGGNLDRIRQISGADVTVFDPSSTGTSGGKV-VISGTPDQTFAA 582
Query: 614 ENLIQAFI 621
++L+QAFI
Sbjct: 583 QSLLQAFI 590
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 141/333 (42%), Gaps = 63/333 (18%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
++ R++C + +G +IG G + +R+ +G +I +D D+ VI V I S D
Sbjct: 38 QIAFRLVCHSSTVGGLIGSSGSIVSQLRRETGCKIHCEDAVVGTDDRVILV--IGSMSDR 95
Query: 367 K-----------SMAVEAVLLLQTKINDEDDDT-----VTIRLLVSSKVIGCIIGKSGSI 410
K S A E V+ + ++ + + V +LL S +G I+GK G
Sbjct: 96 KGIVLGDREMEVSNAQEGVVRVFDRVWGLESEKGGNGEVYGKLLAHSSQVGAIVGKGGKN 155
Query: 411 INEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDG 470
I+ IR + +++R+ P CA ++EL+ + GE +V+ AL+ + L+D
Sbjct: 156 ISNIRNNSGSNIRVCPA--PHCAAKDEELILITGESLAVKKALIYVSYCLQD-------- 205
Query: 471 SRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLS--SSSLYGYGS 528
PP+G ++ PP + S R+ S + + +S L
Sbjct: 206 --CPPMGK-------VSLNTPPTINS---------SDRSTSYTHEDLFPHLNSWLPSMEG 247
Query: 529 LSMGDSPYGSM-----SSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKIS 583
LS+ D+ + SS SK G + +L N G VIGK GS + +
Sbjct: 248 LSINDASKQTTNANGNSSLDSK---GSGHAVVFRLLCSNNVAGSVIGKKGSIVRTFEIRT 304
Query: 584 GATIEMSDSKSSRGDRVALISGTPEQKRAAENL 616
GA+I + +R+ IS A ENL
Sbjct: 305 GASIVFAPPLGQYEERIVTIS-------AFENL 330
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 136/325 (41%), Gaps = 40/325 (12%)
Query: 29 DEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYS 88
D KG+ +V++R+LC + V GSVIGK G ++ + T A + P ++R+VTI +
Sbjct: 267 DSKGSGHAVVFRLLCSNNVAGSVIGKKGSIVRTFEIRTGASIVFAPPLGQYEERIVTISA 326
Query: 89 HVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIA-NAVANATDNDKKRKEKEECQILVP 147
E++E + AQDA++ V IA + + N + ++L+
Sbjct: 327 F----ENLESSNS--------PAQDAVILVFTRIAEDHIRNGFQPATAVESPVTARLLIT 374
Query: 148 SSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKA 207
+S + G G I LR + I++ EP + A + D V I+G V+ A
Sbjct: 375 TSTLHLLTGNEGQVISELRQVSGADIQLL---HGEPIPN-ASDNDVVVQITGGYRCVENA 430
Query: 208 LFAISAIMYKFSPREDIPLETTVREAPP-------SIIIPSDVPIYPPGGLYPNADPILP 260
L I++I+ ++ E ++ + P S I +P + P +
Sbjct: 431 LRKITSIIRDNPLTNELLAEAKIKPSFPLNKDTVRSKFITRKKSSFPFARVPPQNAGVYQ 490
Query: 261 SRSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIG 320
++ V G + T V ++V+ + + + ++ + G
Sbjct: 491 AKKVTE----------NGESHTNLIENVEPGRGNIVATVTNTT------VEIIVSEHVFG 534
Query: 321 RVIGKGGGTIKSIRQASGAQIDVDD 345
V G+ GG + IRQ SGA + V D
Sbjct: 535 SVYGEDGGNLDRIRQISGADVTVFD 559
>gi|297849822|ref|XP_002892792.1| hypothetical protein ARALYDRAFT_471578 [Arabidopsis lyrata subsp.
lyrata]
gi|297338634|gb|EFH69051.1| hypothetical protein ARALYDRAFT_471578 [Arabidopsis lyrata subsp.
lyrata]
Length = 477
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 148/473 (31%), Positives = 250/473 (52%), Gaps = 65/473 (13%)
Query: 5 GKRYRSQRDNDRDGKNQKRRINEKDEK---GNEESVIYRILCPDGVIGSVIGKSGKVINS 61
GKR Q + +G +++R +++ ++ G+EE+V YR LCP GS+IGK G +
Sbjct: 10 GKRSNLQSELTGNGGSKRRNLHDDTDQNVIGSEETV-YRYLCPVKKTGSIIGKGGDIAKQ 68
Query: 62 IRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVH-A 120
IR ET++ +++ + PG ++RVVTIYS + E++ +D E +C A DAL KVH
Sbjct: 69 IRSETKSNMRINEALPGCEERVVTIYS-----TNEELNHFGDDGELVCPALDALFKVHDM 123
Query: 121 AIANAVANATDNDKKRKEKEEC--QILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPK 178
+A+ + ++D EK+ ++LVPS Q +IGK G I+ LR+ T I+V
Sbjct: 124 VVADIDHDDGNDDDDLGEKQTVTVRMLVPSDQIGCVIGKGGQVIQNLRNDTNAQIRVIKD 183
Query: 179 DASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSII 238
P+ + + D + I GE V++AL+ ++++++ R ++
Sbjct: 184 HL--PSCALTLSHDELLQIIGEPLVVREALYQVASLLHANPSR------------FQHLL 229
Query: 239 IPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSG 298
+ S ++ PG + ++ AA + YA +
Sbjct: 230 LSSSSSMHQPGAM---------------LMSAALTSSHRNYAVRRDI------------- 261
Query: 299 LVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
+ + E + +CP +G VIGKGGG I IRQ +GA I V+ ++ + D+C+I ++
Sbjct: 262 ----ADAREFCVCFICPAENVGGVIGKGGGFINQIRQETGATIRVNTSETDEDDCIIVIS 317
Query: 359 AIESPDDIKSMAVEAVLLLQTKIN-----DEDDDTVTIRLLVSSKVIGCIIGKSGSIINE 413
+ E +D +S AV A + LQ + + D +D ++ RLLVSS IGC+IGK G++I+E
Sbjct: 318 SKEFYED-QSPAVNAAIRLQQRCSEKVGKDANDLAISTRLLVSSSQIGCLIGKGGAVISE 376
Query: 414 IRKRTKADVRI-SKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDAL 465
+R T+A++RI K D PK A ++E+V++ G + AL Q+ILRLR ++
Sbjct: 377 MRSVTRANIRILQKEDVPKIAREDEEMVQITGNPDAAMKALTQVILRLRANSF 429
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 144/326 (44%), Gaps = 75/326 (23%)
Query: 305 SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESP- 363
SEE V R LCP K G +IGKGG K IR + + + +++ +E V+T+ +
Sbjct: 41 SEETVYRYLCPVKKTGSIIGKGGDIAKQIRSETKSNMRINEALPGCEERVVTIYSTNEEL 100
Query: 364 ----DD--IKSMAVEAVLLLQTKINDE-----------------DDDTVTIRLLVSSKVI 400
DD + A++A+ K++D + TVT+R+LV S I
Sbjct: 101 NHFGDDGELVCPALDALF----KVHDMVVADIDHDDGNDDDDLGEKQTVTVRMLVPSDQI 156
Query: 401 GCIIGKSGSIINEIRKRTKADVRISKGDKPKCAD--ANDELVEVVGEVGSVRDALVQIIL 458
GC+IGK G +I +R T A +R+ K P CA ++DEL++++GE VR+AL Q+
Sbjct: 157 GCVIGKGGQVIQNLRNDTNAQIRVIKDHLPSCALTLSHDELLQIIGEPLVVREALYQV-- 214
Query: 459 RLRDDALKDRDGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGML 518
S+ P + S
Sbjct: 215 ------------------------------------ASLLHANPSRFQHLLLS------- 231
Query: 519 SSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLAN 578
SSSS++ G++ M + S +Y+ + + + PA VG VIGK G +
Sbjct: 232 SSSSMHQPGAMLMSAALTSSHRNYAVRRDIADAREFCVCFICPAENVGGVIGKGGGFINQ 291
Query: 579 IRKISGATIEMSDSKSSRGDRVALIS 604
IR+ +GATI ++ S++ D + +IS
Sbjct: 292 IRQETGATIRVNTSETDEDDCIIVIS 317
>gi|186478468|ref|NP_001117282.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|5080792|gb|AAD39302.1|AC007576_25 Unknown protein [Arabidopsis thaliana]
gi|332190995|gb|AEE29116.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 479
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 146/473 (30%), Positives = 243/473 (51%), Gaps = 63/473 (13%)
Query: 5 GKRYRSQRDNDRDGKNQKRRINEKDEKG--NEESVIYRILCPDGVIGSVIGKSGKVINSI 62
GKR Q + +G +++R ++++ ++ E +YR LCP GS+IGK G++ I
Sbjct: 10 GKRSNLQSEFTGNGGSKRRNLHDETDQNVIASEDTVYRYLCPVKKTGSIIGKGGEIAKQI 69
Query: 63 RQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVH--- 119
R ET++ +++ + PG ++RVVT+YS + E++ +D E +C A DAL KVH
Sbjct: 70 RSETKSNMRINEALPGCEERVVTMYS-----TNEELNHFGDDGELVCPALDALFKVHDMV 124
Query: 120 -AAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPK 178
A DND K+ ++LVPS Q +IGK G I+ LR+ T I+V
Sbjct: 125 VADADQDDGTDDDNDLGEKQTVTVRMLVPSDQIGCVIGKGGQVIQNLRNDTNAQIRVIKD 184
Query: 179 DASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSII 238
P + + D +LI GE V++AL+ ++++++ R ++
Sbjct: 185 HL--PACALTLSHDELLLIIGEPLVVREALYQVASLLHDNPSR-----------FQHLLL 231
Query: 239 IPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSG 298
S ++ PG + ++ AA + YA +
Sbjct: 232 SSSSSSMHQPGAM---------------LMSAALTSSHRNYAVRRDI------------- 263
Query: 299 LVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
+ + E + +CP +G VIGKGGG I IRQ +GA I V+ ++ + D+C+I ++
Sbjct: 264 ----ADAREFCVCFICPAENVGGVIGKGGGFINQIRQETGATIRVNTSETDDDDCIIFIS 319
Query: 359 AIESPDDIKSMAVEAVLLLQTKIN-----DEDDDTVTIRLLVSSKVIGCIIGKSGSIINE 413
+ E +D +S AV A + LQ + + D +D ++ RLLVSS IGC+IGK G++I+E
Sbjct: 320 SKEFYED-QSPAVNAAIRLQQRCSEKVGKDANDLAISTRLLVSSSQIGCLIGKGGAVISE 378
Query: 414 IRKRTKADVRI-SKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDAL 465
+R T+A++RI K D PK A ++E+V++ G + AL Q+ILRLR ++
Sbjct: 379 MRSVTRANIRILQKEDVPKIAREDEEMVQITGSPDAAMKALTQVILRLRANSF 431
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 142/327 (43%), Gaps = 75/327 (22%)
Query: 305 SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESP- 363
SE+ V R LCP K G +IGKGG K IR + + + +++ +E V+T+ +
Sbjct: 41 SEDTVYRYLCPVKKTGSIIGKGGEIAKQIRSETKSNMRINEALPGCEERVVTMYSTNEEL 100
Query: 364 ----DD--IKSMAVEAVLLLQTKINDE------------------DDDTVTIRLLVSSKV 399
DD + A++A+ K++D + TVT+R+LV S
Sbjct: 101 NHFGDDGELVCPALDALF----KVHDMVVADADQDDGTDDDNDLGEKQTVTVRMLVPSDQ 156
Query: 400 IGCIIGKSGSIINEIRKRTKADVRISKGDKPKCAD--ANDELVEVVGEVGSVRDALVQII 457
IGC+IGK G +I +R T A +R+ K P CA ++DEL+ ++GE VR+AL Q+
Sbjct: 157 IGCVIGKGGQVIQNLRNDTNAQIRVIKDHLPACALTLSHDELLLIIGEPLVVREALYQVA 216
Query: 458 LRLRDDALKDRDGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGM 517
L D+ P H+ S + SM
Sbjct: 217 SLLHDN-----------PSRFQHLLLSSSSSSM--------------------------- 238
Query: 518 LSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLA 577
+ G++ M + S +Y+ + + + PA VG VIGK G +
Sbjct: 239 ------HQPGAMLMSAALTSSHRNYAVRRDIADAREFCVCFICPAENVGGVIGKGGGFIN 292
Query: 578 NIRKISGATIEMSDSKSSRGDRVALIS 604
IR+ +GATI ++ S++ D + IS
Sbjct: 293 QIRQETGATIRVNTSETDDDDCIIFIS 319
>gi|226529077|ref|NP_001146029.1| hypothetical protein [Zea mays]
gi|219885375|gb|ACL53062.1| unknown [Zea mays]
gi|414589866|tpg|DAA40437.1| TPA: hypothetical protein ZEAMMB73_485730 [Zea mays]
Length = 624
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 164/569 (28%), Positives = 254/569 (44%), Gaps = 96/569 (16%)
Query: 121 AIANAVANATDNDKKRKEKEE---------CQILVPSSQSANIIGKAGATIKRLRSKTRT 171
A + V + + D+ +EE C++L Q ++GK G T++R+R +
Sbjct: 81 AWEHVVGHRVEGDEAMGGEEEEREVTGAVGCRMLAAGWQVGCVLGKGGKTVERMRQECGA 140
Query: 172 SIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVR 231
I+V P A D + ISG V+KAL A+S + +PR D
Sbjct: 141 QIRVFRNREQLP--PWAPPGDELIHISGSFSQVRKALLAVSTCLQD-NPRPD-------- 189
Query: 232 EAPPSIIIPSDVPIYPPG---GLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTWPV 288
+ IP P PG G P DP +P +PD N P
Sbjct: 190 ----THNIPIGRPFGLPGSGTGCPPGMDPHSQRSYLP-----PHIPDYHTRNYPSNAGP- 239
Query: 289 YSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD 348
G +E+V R++ +G +IGKGG TI++++ +GA I + +
Sbjct: 240 --PGPRFFF-------EQEIVFRMIILNEMVGSIIGKGGSTIRALQSETGACIKILEPVA 290
Query: 349 NRDECVITVTAIESPDDIKSMAVEAVLLLQTKINDEDDD---TVTIRLLVSSKVIGCIIG 405
+ DE V+ +TA E+ D + S A +AV+ + ++I++ D RLLV S+ IGC++G
Sbjct: 291 DSDERVVAITARENSDMLHSPAQDAVVRVYSRISEASIDRSSHTPARLLVPSQHIGCLLG 350
Query: 406 KSGSIINEIRKRTKADVRISKGDK-PKCADANDELVEVVGEVGSVRDALVQIILRLRDDA 464
K GSII+E+RK T A++RI ++ P+CA NDE+V+V G S++DAL+ I R+RD
Sbjct: 351 KGGSIISEMRKITGANIRIFGNEQIPRCAQRNDEMVQVTGSFQSIQDALLHITGRIRDVI 410
Query: 465 LKDRDGSRN----PPVGADHIYSSGTGISMPPLLPS--IPPV--------GPLGY----D 506
L S PPVG ++ S P L PS +PP P+G+ D
Sbjct: 411 LPKPHPSGGMPPYPPVGNIPVHQSRQEQPPPHLHPSGGMPPYPMHPFRPDAPMGHFEMGD 470
Query: 507 QRADSGSGIGMLSSSSL-YGYGSLSMGDSPY--------------GSMSSYSSKLYGGLP 551
R + + + + Y YG G P+ + S + +P
Sbjct: 471 HRPPPVHSMEYMGADRMPYLYGVEQGGPRPFLEQPSPRTCPPEAPRTNSEVPRNMSDAVP 530
Query: 552 -----------------PPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS 594
P T EV++P N +G V G GS + I K+SGA+I + D K+
Sbjct: 531 ATDFRKGPVAIENQVATPTGTTEVIIPCNYIGFVCGNNGSEIEEIEKMSGASITVHDPKA 590
Query: 595 SRGDRVALISGTPEQKRAAENLIQAFIMA 623
+ +I G PE+ + A++LI AFI
Sbjct: 591 GDANSKVVICGDPEETKKAQSLIHAFIFC 619
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 93/365 (25%), Positives = 156/365 (42%), Gaps = 73/365 (20%)
Query: 34 EESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDK 93
E+ +++R++ + ++GS+IGK G I +++ ET A +K+++P + +RVV I +
Sbjct: 247 EQEIVFRMIILNEMVGSIIGKGGSTIRALQSETGACIKILEPVADSDERVVAITAR---- 302
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
E D + AQDA+++V++ I+ A + + + R +LVPS
Sbjct: 303 ---ENSDMLHSP-----AQDAVVRVYSRISEASIDRSSHTPAR-------LLVPSQHIGC 347
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAI-- 211
++GK G+ I +R T +I++ +E CA D V ++G ++++ AL I
Sbjct: 348 LLGKGGSIISEMRKITGANIRIF---GNEQIPRCAQRNDEMVQVTGSFQSIQDALLHITG 404
Query: 212 ------------SAIMYKFSPREDIPLETTVREAPPSIIIPS-DVPIYP--------PGG 250
S M + P +IP+ + +E PP + PS +P YP P G
Sbjct: 405 RIRDVILPKPHPSGGMPPYPPVGNIPVHQSRQEQPPPHLHPSGGMPPYPMHPFRPDAPMG 464
Query: 251 LYPNADPILPSRSVPSILGAARVPDLQGYADTG----------NTWPVYS--TGLSLVSG 298
+ D P +GA R+P L G G T P + T +
Sbjct: 465 HFEMGDHRPPPVHSMEYMGADRMPYLYGVEQGGPRPFLEQPSPRTCPPEAPRTNSEVPRN 524
Query: 299 LVGASQSEEL----------------VIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQID 342
+ A + + V+ P N IG V G G I+ I + SGA I
Sbjct: 525 MSDAVPATDFRKGPVAIENQVATPTGTTEVIIPCNYIGFVCGNNGSEIEEIEKMSGASIT 584
Query: 343 VDDTK 347
V D K
Sbjct: 585 VHDPK 589
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 66/307 (21%), Positives = 128/307 (41%), Gaps = 54/307 (17%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSM 369
+R+LCP +++ ++R + +D D E V+ ++ ++P
Sbjct: 36 LRLLCPSSRVA-----------TLRPSRDLHVDHPPVGD---EAVLVISGPDTPA-AAVR 80
Query: 370 AVEAVLLLQTKIND-----EDDDTVT----IRLLVSSKVIGCIIGKSGSIINEIRKRTKA 420
A E V+ + + ++ E++ VT R+L + +GC++GK G + +R+ A
Sbjct: 81 AWEHVVGHRVEGDEAMGGEEEEREVTGAVGCRMLAAGWQVGCVLGKGGKTVERMRQECGA 140
Query: 421 DVRISKGDK--PKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGA 478
+R+ + + P A DEL+ + G VR AL+ + L+D+ D + N P+G
Sbjct: 141 QIRVFRNREQLPPWAPPGDELIHISGSFSQVRKALLAVSTCLQDNPRPD---THNIPIGR 197
Query: 479 DH-IYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYG 537
+ SGTG P G D + + Y S + P G
Sbjct: 198 PFGLPGSGTGC-------------PPGMDPHSQRSYLPPHIPDYHTRNYPSNA---GPPG 241
Query: 538 SMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRG 597
+ + + +++ VG +IGK GS + ++ +GA I++ + +
Sbjct: 242 PRFFFEQE--------IVFRMIILNEMVGSIIGKGGSTIRALQSETGACIKILEPVADSD 293
Query: 598 DRVALIS 604
+RV I+
Sbjct: 294 ERVVAIT 300
>gi|293332893|ref|NP_001169297.1| uncharacterized protein LOC100383161 [Zea mays]
gi|224028485|gb|ACN33318.1| unknown [Zea mays]
Length = 664
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 167/616 (27%), Positives = 288/616 (46%), Gaps = 63/616 (10%)
Query: 32 GNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVK 91
G+ + +RILCP+ S S + +R ++ A V V PF G RV+ +
Sbjct: 80 GSTATTSFRILCPECKAYSF---SPGFVAKVRDDSGALVTVHPPFAGDYVRVIETVDGAR 136
Query: 92 DKEDVEVDDEFNDKEPLCA-AQDALLKVHAAIANAVANATD---------NDKKRKEKEE 141
+ D P+ + AQ+ALL VH I A+ D D + + K
Sbjct: 137 READ--------GCPPMFSPAQEALLMVHRRILETDADDGDEDGEYGPRGKDARDRGKTT 188
Query: 142 CQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGES 201
+++VP ++GK G I+++R +T+T I++ + P C + V + G+
Sbjct: 189 TRLIVPKQHVGCLLGKGGKIIEQMRMETKTHIRILSRGQHTP--RCVSSSEEVVQVVGDG 246
Query: 202 EAVKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPS 261
VKKA+ I+ + + R+ P + P I + GG+
Sbjct: 247 NCVKKAVAIITDRLKESLHRDRGPFRGRLNSPEPRISQEDEYL----GGV---------- 292
Query: 262 RSVPSILGAARVPDL---------QGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRV 312
+ +P+ + + PD GY N V L E+++ R+
Sbjct: 293 QQMPAYVESLGGPDQIRNNISMEPPGYVFDSNGGKVIEHPDILY---------EDIIFRI 343
Query: 313 LCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVE 372
LCP +K ++ G ++ ++ G + + D + DE V+ +T+ E PD A E
Sbjct: 344 LCPNDKADSLVATRDGILEMLQTDVGVDVRLSDITSDSDERVLIITSREGPDHELFPAQE 403
Query: 373 AVLLLQTKIND---EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRI-SKGD 428
AVL +QT I D + D+ +T RLLV + I C G+ GS+ ++I+++T A+V+I + D
Sbjct: 404 AVLHIQTHIVDLGPDMDNIITTRLLVPASEIACFDGREGSL-SDIQRQTSANVQILPRED 462
Query: 429 KPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSGTGI 488
P CA +DEL+++VGE+ + R+AL+Q+ +LR + R+ VG +++ + + +
Sbjct: 463 LPSCALESDELIQIVGEIKAARNALIQVTTKLR--SFLYREMPDPIQVGNINLHGAISPV 520
Query: 489 SMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYG 548
+ P P P+G +A + S GS G + + ++K +
Sbjct: 521 AGSPRGPYQGNDIPMGAYHQASQLATSWHSKDSGGSASGSFEQGSNINDDIRQSATKRFA 580
Query: 549 -GLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTP 607
L TLE+++P +AV + +AGS LA I +ISGA + +++ +S +V ISGTP
Sbjct: 581 VPLVTRSTLEIVIPNSAVASLTMRAGSKLAQISEISGAAVTLAEDRSDILQKVVRISGTP 640
Query: 608 EQKRAAENLIQAFIMA 623
EQ AENL+Q FI++
Sbjct: 641 EQASKAENLLQGFILS 656
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 89/194 (45%), Gaps = 29/194 (14%)
Query: 301 GASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDD-TKDNRDECVITVTA 359
GA + R+LCP K G + +R SGA + V + + TV
Sbjct: 78 GAGSTATTSFRILCPECK---AYSFSPGFVAKVRDDSGALVTVHPPFAGDYVRVIETVDG 134
Query: 360 IESPDD----IKSMAVEAVLLLQTKI-------------------NDEDDDTVTIRLLVS 396
D + S A EA+L++ +I + D T RL+V
Sbjct: 135 ARREADGCPPMFSPAQEALLMVHRRILETDADDGDEDGEYGPRGKDARDRGKTTTRLIVP 194
Query: 397 SKVIGCIIGKSGSIINEIRKRTKADVRI-SKGDK-PKCADANDELVEVVGEVGSVRDALV 454
+ +GC++GK G II ++R TK +RI S+G P+C +++E+V+VVG+ V+ A+
Sbjct: 195 KQHVGCLLGKGGKIIEQMRMETKTHIRILSRGQHTPRCVSSSEEVVQVVGDGNCVKKAVA 254
Query: 455 QIILRLRDDALKDR 468
I RL++ +DR
Sbjct: 255 IITDRLKESLHRDR 268
>gi|356526304|ref|XP_003531758.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Glycine
max]
Length = 565
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 169/647 (26%), Positives = 281/647 (43%), Gaps = 167/647 (25%)
Query: 38 IYRILCPDGVIGSV--IGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKED 95
++RI+CP V IG G I +V+ GA++RVV I
Sbjct: 20 VFRIVCPAAKTADVAAIGGDGAKI------------LVEDLVGAEERVVVI--------- 58
Query: 96 VEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANII 155
V DE AAQ AL++V T +++ + C+++ PS Q ++
Sbjct: 59 --VGDE-------SAAQVALIRV--------LERTMDEETKNSTVSCKLVAPSYQVGCVL 101
Query: 156 GKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIM 215
G+ G ++++R + I+V PKD D F+ I+G AVKKA+ ++SA +
Sbjct: 102 GRGGKIVEKIRQDSGAHIRVLPKDQPP-----PPPGDEFIQITGNFGAVKKAVLSVSACL 156
Query: 216 YKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPD 275
++ ++ + P G A P SR
Sbjct: 157 HE-----------------------NNYGAFKPSGGGSYAPPDHHSRG------------ 181
Query: 276 LQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQ 335
Y+++ +S+ V EE+V ++LC +K+G +IGKGG +++++
Sbjct: 182 --AYSESAG----HSSHRMFVE--------EEVVFKLLCRHDKVGSLIGKGGSVVRALQN 227
Query: 336 ASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQ---TKINDEDDDTVTIR 392
+GA I + + + DE V+ ++A E+ + S A EAV+ + T+I E V +
Sbjct: 228 ETGASIQIVEAGPDSDERVVVISAQETSEQKHSPAQEAVIRVHCRLTEIGFEPSAAVVAK 287
Query: 393 LLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDA 452
LLV S +GC++GK G +I+E+R+ T A +RI ++ K N+E+V+V+G + SV+DA
Sbjct: 288 LLVRSPQVGCLLGKGGLVISEMRRATGASIRIFSKEQIKYISQNEEVVQVIGSLQSVQDA 347
Query: 453 LVQIILRLRDDALKDR-------------------------------------------D 469
L I R+R+ R D
Sbjct: 348 LFHITNRIRETIFPIRTPPNFSAPPHFPPFPEMPPPLFRPRNHLMSSGHPPPPQVGHPHD 407
Query: 470 GSRNPPVGADH-----IYSSGTGISMPPLLPSIP-------PVGPLGYDQRA-DSGSGIG 516
S PP+ DH ++ G G PP + +P P P ++ A D G+ G
Sbjct: 408 HSTVPPMPVDHQQHAFVHGMGRG---PPNMDRVPYPRGYEGPNSPRSWNPLAVDRGNPGG 464
Query: 517 MLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNL 576
+SSL S ++P + + + P LT+E+ +P + V G+ SNL
Sbjct: 465 TADTSSL-----TSRNETPVKNGNPLQN------PNSLTIEITIPYMYLTHVYGENNSNL 513
Query: 577 ANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFIMA 623
IR+ SGA + + DSK + + ++SG P+Q AA+ LIQ FI+
Sbjct: 514 TQIRQTSGANVAVHDSKPGATEGLVIVSGAPDQTHAAQCLIQGFILC 560
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 86/381 (22%), Positives = 157/381 (41%), Gaps = 74/381 (19%)
Query: 34 EESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDK 93
EE V++++LC +GS+IGK G V+ +++ ET A +++V+ P + +RVV I +
Sbjct: 197 EEEVVFKLLCRHDKVGSLIGKGGSVVRALQNETGASIQIVEAGPDSDERVVVISA----- 251
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
+ ++ AQ+A+++VH + T+ + ++LV S Q
Sbjct: 252 -------QETSEQKHSPAQEAVIRVHCRL-------TEIGFEPSAAVVAKLLVRSPQVGC 297
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISA 213
++GK G I +R T SI++ K+ + + + V + G ++V+ ALF I+
Sbjct: 298 LLGKGGLVISEMRRATGASIRIFSKEQIK----YISQNEEVVQVIGSLQSVQDALFHITN 353
Query: 214 -IMYKFSPREDIP------------------------LETTVREAPPSIIIPSDVPIYPP 248
I P P L ++ PP + P D PP
Sbjct: 354 RIRETIFPIRTPPNFSAPPHFPPFPEMPPPLFRPRNHLMSSGHPPPPQVGHPHDHSTVPP 413
Query: 249 GGLYPNADPILP--SRSVPSILGAARVPDLQGYA--DTGNTWPVYST------GLSLVSG 298
+ + R P++ RVP +GY ++ +W + G + S
Sbjct: 414 MPVDHQQHAFVHGMGRGPPNM---DRVPYPRGYEGPNSPRSWNPLAVDRGNPGGTADTSS 470
Query: 299 LVGASQS-----------EELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTK 347
L +++ L I + P+ + V G+ + IRQ SGA + V D+K
Sbjct: 471 LTSRNETPVKNGNPLQNPNSLTIEITIPYMYLTHVYGENNSNLTQIRQTSGANVAVHDSK 530
Query: 348 DNRDECVITVTAIESPDDIKS 368
E ++ V+ +PD +
Sbjct: 531 PGATEGLVIVSG--APDQTHA 549
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 139/321 (43%), Gaps = 71/321 (22%)
Query: 309 VIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKS 368
V R++CP K V GG GA+I V+D + V+ V D +
Sbjct: 20 VFRIVCPAAKTADVAAIGG---------DGAKILVEDLVGAEERVVVIV------GDESA 64
Query: 369 MAVEAVLLLQTKINDE-DDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKG 427
V + +L+ +++E + TV+ +L+ S +GC++G+ G I+ +IR+ + A +R+
Sbjct: 65 AQVALIRVLERTMDEETKNSTVSCKLVAPSYQVGCVLGRGGKIVEKIRQDSGAHIRVLPK 124
Query: 428 DKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSGTG 487
D+ DE +++ G G+V+ A++ + L ++ G+ P SG G
Sbjct: 125 DQ-PPPPPGDEFIQITGNFGAVKKAVLSVSACLHENNY----GAFKP---------SGGG 170
Query: 488 ISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLY 547
PP D + G S S G S S +++
Sbjct: 171 SYAPP-------------DHHSR--------------GAYSESAGHS--------SHRMF 195
Query: 548 GGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISG-- 605
+ + ++L + VG +IGK GS + ++ +GA+I++ ++ +RV +IS
Sbjct: 196 --VEEEVVFKLLCRHDKVGSLIGKGGSVVRALQNETGASIQIVEAGPDSDERVVVISAQE 253
Query: 606 TPEQKR--AAENLIQAFIMAT 624
T EQK A E +I+ T
Sbjct: 254 TSEQKHSPAQEAVIRVHCRLT 274
Score = 40.0 bits (92), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 81/203 (39%), Gaps = 57/203 (28%)
Query: 29 DEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYS 88
DE+ +V +++ P +G V+G+ GK++ IRQ++ A ++V+
Sbjct: 78 DEETKNSTVSCKLVAPSYQVGCVLGRGGKIVEKIRQDSGAHIRVLP-------------- 123
Query: 89 HVKDKEDVEVDDEF-NDKEPLCAAQDALLKVHAAIAN----------------------- 124
KD+ DEF A + A+L V A +
Sbjct: 124 --KDQPPPPPGDEFIQITGNFGAVKKAVLSVSACLHENNYGAFKPSGGGSYAPPDHHSRG 181
Query: 125 AVANATDNDKKRKEKEE---CQILVPSSQSANIIGKAGATIKRLRSKTRTSIK------- 174
A + + + R EE ++L + ++IGK G+ ++ L+++T SI+
Sbjct: 182 AYSESAGHSSHRMFVEEEVVFKLLCRHDKVGSLIGKGGSVVRALQNETGASIQIVEAGPD 241
Query: 175 -------VTPKDASEPTHSCAME 190
++ ++ SE HS A E
Sbjct: 242 SDERVVVISAQETSEQKHSPAQE 264
>gi|255561850|ref|XP_002521934.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223538859|gb|EEF40458.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 704
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 166/609 (27%), Positives = 276/609 (45%), Gaps = 71/609 (11%)
Query: 39 YRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEV 98
YRILC D G VIGKSG +I SIRQ T A + V + PG ++R++ I D
Sbjct: 77 YRILCHDMKAGGVIGKSGTIIKSIRQHTGAWINVHELIPGDEERIIEI-------SDTRR 129
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANA-------VANATDNDKKR-----KEKEECQILV 146
D AQ+AL +H I + AN D R + +++V
Sbjct: 130 RDPEGRMPAFSPAQEALFLIHDRILESDGQFGMSYANEEDEYGGRGINNSNNRVATRLVV 189
Query: 147 PSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKK 206
++GK G I+++R +T+T I++ P+D + P C + V + G+ AVK
Sbjct: 190 SRMHVGCLLGKGGKIIEQMRIETKTQIRILPRDHTLP--RCVSMSEEIVQVVGDVNAVKN 247
Query: 207 ALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSD--VPIYPPGGLYPNADPILPSRSV 264
A+ IS+ + + R+ R P P D VP G + D
Sbjct: 248 AIAIISSRLRESQHRDRSHGNFHGRMHSPERFFPDDDYVPHMNNTGRRSSIDG------- 300
Query: 265 PSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQ---SEELVIRVLCPFNKIGR 321
PS A P+ Y ++ + Y + + + ++Q ++LV R+LCP +K+ +
Sbjct: 301 PSFGSRASGPN---YRNSNYSSRQYGYNVEAGAPVADSAQPFYGDDLVFRMLCPADKVNK 357
Query: 322 VIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKI 381
V+G+ G + ++ G + V D DE +I +++ E PDD A EA+L +QT I
Sbjct: 358 VVGESDGILDLLQNDIGVDVKVSDPVSGSDEQMIIISSEEGPDDELFPAQEALLHIQTHI 417
Query: 382 ND---EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDK-PKCADAND 437
D + D+ + +L+VSS IGC+ G+ GS ++E+ + T A ++I +K P C D
Sbjct: 418 IDLVPDSDNIIKTKLIVSSGEIGCLEGRDGS-LSEMERLTGAKIQILPREKLPACVSEAD 476
Query: 438 ELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSGTGISMPPLLPS- 496
ELV++ GE+ + RDALV++ RLR K+ PP + + S+G + M P+
Sbjct: 477 ELVQIEGEIKAARDALVEVTSRLRSYLYKEYFQKDTPPPIS--VPSTGNALGMEAASPNN 534
Query: 497 -IPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLT 555
PP D SG G+ P + + + L +
Sbjct: 535 INPP---------RDGHSG-----------------GEPPAANYHTPKTAAPIQLSKVII 568
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAEN 615
L + + ++ L +SGA + + + + +++ ISGTPEQ A++
Sbjct: 569 LWLCRIFFLLHFSFSRSYVQLLLSTVLSGANVTLLEDRPEVTEKIIQISGTPEQVERAQS 628
Query: 616 LIQAFIMAT 624
L+Q FI+++
Sbjct: 629 LLQGFILSS 637
>gi|30683629|ref|NP_172869.2| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|30102666|gb|AAP21251.1| At1g14170 [Arabidopsis thaliana]
gi|110743444|dbj|BAE99608.1| hypothetical protein [Arabidopsis thaliana]
gi|332190993|gb|AEE29114.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 454
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 145/453 (32%), Positives = 237/453 (52%), Gaps = 62/453 (13%)
Query: 23 RRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDR 82
R I++++ +E++V YR LCP GS+IGK G++ IR ET++ +++ + PG ++R
Sbjct: 6 RNIHDQNVIASEDTV-YRYLCPVKKTGSIIGKGGEIAKQIRSETKSNMRINEALPGCEER 64
Query: 83 VVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVH----AAIANAVANATDNDKKRKE 138
VVT+YS + E++ +D E +C A DAL KVH A DND K+
Sbjct: 65 VVTMYS-----TNEELNHFGDDGELVCPALDALFKVHDMVVADADQDDGTDDDNDLGEKQ 119
Query: 139 KEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLIS 198
++LVPS Q +IGK G I+ LR+ T I+V KD P + + D +LI
Sbjct: 120 TVTVRMLVPSDQIGCVIGKGGQVIQNLRNDTNAQIRVI-KD-HLPACALTLSHDELLLII 177
Query: 199 GESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPI 258
GE V++AL+ ++++++ R ++ S ++ PG +
Sbjct: 178 GEPLVVREALYQVASLLHDNPSR-----------FQHLLLSSSSSSMHQPGAM------- 219
Query: 259 LPSRSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNK 318
++ AA + YA + + + E + +CP
Sbjct: 220 --------LMSAALTSSHRNYAVRRDI-----------------ADAREFCVCFICPAEN 254
Query: 319 IGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQ 378
+G VIGKGGG I IRQ +GA I V+ ++ + D+C+I +++ E +D +S AV A + LQ
Sbjct: 255 VGGVIGKGGGFINQIRQETGATIRVNTSETDDDDCIIFISSKEFYED-QSPAVNAAIRLQ 313
Query: 379 TKIN-----DEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRI-SKGDKPKC 432
+ + D +D ++ RLLVSS IGC+IGK G++I+E+R T+A++RI K D PK
Sbjct: 314 QRCSEKVGKDANDLAISTRLLVSSSQIGCLIGKGGAVISEMRSVTRANIRILQKEDVPKI 373
Query: 433 ADANDELVEVVGEVGSVRDALVQIILRLRDDAL 465
A ++E+V++ G + AL Q+ILRLR ++
Sbjct: 374 AREDEEMVQITGSPDAAMKALTQVILRLRANSF 406
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 142/327 (43%), Gaps = 75/327 (22%)
Query: 305 SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESP- 363
SE+ V R LCP K G +IGKGG K IR + + + +++ +E V+T+ +
Sbjct: 16 SEDTVYRYLCPVKKTGSIIGKGGEIAKQIRSETKSNMRINEALPGCEERVVTMYSTNEEL 75
Query: 364 ----DD--IKSMAVEAVLLLQTKINDE------------------DDDTVTIRLLVSSKV 399
DD + A++A+ K++D + TVT+R+LV S
Sbjct: 76 NHFGDDGELVCPALDALF----KVHDMVVADADQDDGTDDDNDLGEKQTVTVRMLVPSDQ 131
Query: 400 IGCIIGKSGSIINEIRKRTKADVRISKGDKPKCAD--ANDELVEVVGEVGSVRDALVQII 457
IGC+IGK G +I +R T A +R+ K P CA ++DEL+ ++GE VR+AL Q+
Sbjct: 132 IGCVIGKGGQVIQNLRNDTNAQIRVIKDHLPACALTLSHDELLLIIGEPLVVREALYQVA 191
Query: 458 LRLRDDALKDRDGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGM 517
L D+ P H+ S + SM
Sbjct: 192 SLLHDN-----------PSRFQHLLLSSSSSSM--------------------------- 213
Query: 518 LSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLA 577
+ G++ M + S +Y+ + + + PA VG VIGK G +
Sbjct: 214 ------HQPGAMLMSAALTSSHRNYAVRRDIADAREFCVCFICPAENVGGVIGKGGGFIN 267
Query: 578 NIRKISGATIEMSDSKSSRGDRVALIS 604
IR+ +GATI ++ S++ D + IS
Sbjct: 268 QIRQETGATIRVNTSETDDDDCIIFIS 294
>gi|255537898|ref|XP_002510014.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223550715|gb|EEF52201.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 679
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 201/717 (28%), Positives = 320/717 (44%), Gaps = 150/717 (20%)
Query: 6 KRYRSQRDNDRDGKNQKRRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQE 65
KR + + +GK++ ++ +G V++RILCP G +IGK G +I+ IRQE
Sbjct: 9 KRPHDRNHTETNGKSKLQKTVNSPVRG----VVFRILCPASKTGGIIGKGGAIISQIRQE 64
Query: 66 TRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDD------EFNDKEP------------ 107
T A+V+V + PG+ +RVV I + DKE +EV++ + +DKEP
Sbjct: 65 TGAKVRVEETVPGSDERVVIIAAG-SDKE-MEVNNAEQNRGDSDDKEPNVGEESNGKQAG 122
Query: 108 ----------------------LCAAQDALLKVHAAI--ANAVANATDNDKKRKEKEECQ 143
+ Q AL+ V + A + + +KK+ +
Sbjct: 123 SDEDDENKETVSVEHSTKSVRETSSLQKALVLVFERMLEAEPEMDEGNEEKKKPSMSTLR 182
Query: 144 ILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEA 203
+LV SSQ ++GK G+ IK++ +++ I++ P+D CA D V I+GE +A
Sbjct: 183 LLVLSSQVGCLLGKGGSVIKQMSAESGAQIRILPRDK---LPICASPTDELVQIAGEVDA 239
Query: 204 VKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRS 263
++KAL +++ + + P+ D YPP P++ S
Sbjct: 240 IRKALQSVAQQLLENPPK--------------------DPEAYPPISTGPSSH----SFG 275
Query: 264 VPSILGAARVPDLQGYADTGNTWPVYSTGLSLVS--GLVGASQ--SEELVIRVLCPFNKI 319
P A P + G T Y G G+ G + + L R+LC K+
Sbjct: 276 HPLPRPEAYPPPYHSFNARGTT---YGAGPREFHEGGMPGRMRPAPDMLTFRLLCLDEKV 332
Query: 320 GRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQT 379
G VIGKGG IK+++Q +G +I V + + ++ +I ++ PDD S A +AVL +QT
Sbjct: 333 GGVIGKGGAIIKTLQQETGCEIKVLEGVSDSEDRIILISGPAHPDDRISAAQDAVLRVQT 392
Query: 380 KIN------DEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDK-PKC 432
+I + + V RLLVSS IGC++GK G+I+ E+RK T A +RI D+ PKC
Sbjct: 393 RIARALPLPEGKEKAVIGRLLVSSNQIGCLLGKGGAIMAEMRKSTGAYIRILGKDQIPKC 452
Query: 433 ADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSGTGISMPP 492
A N+E+V++ GE V++AL+QI RLR+ +D ++ S S P
Sbjct: 453 ASENEEVVQINGEHEVVQEALLQITTRLRNHFFRD-------------VFPSIDHPSNPA 499
Query: 493 LLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLY-GGLP 551
L PP P Y R + S G +G P+ S + ++ G+P
Sbjct: 500 FLDQAPPFPP--YMGRRELSPPFHAFHSFDGMGGPPPPVGFHPHDDHSPFMHNIHRPGMP 557
Query: 552 PPLTLEVLVPANAV---------------------------------------------G 566
P + P +
Sbjct: 558 PHFERKPWGPQGLMEAGGPMGLPEFGGHPQRRISGFGGVNHPAIITSTTVEVVVPRSVVP 617
Query: 567 KVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFIMA 623
+ G+ G+ L IR+IS A I +++ K + V +ISGTPEQ AA++LIQAF+M+
Sbjct: 618 VIYGEDGACLKQIRQISDAKITVTEPKPGAAETVIIISGTPEQTHAAQSLIQAFVMS 674
>gi|218192926|gb|EEC75353.1| hypothetical protein OsI_11789 [Oryza sativa Indica Group]
Length = 478
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 157/478 (32%), Positives = 247/478 (51%), Gaps = 82/478 (17%)
Query: 62 IRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAA 121
+R +T+A++++ + G +RV+TI+S ++ + VD E DK +C AQDAL +VH
Sbjct: 1 MRADTQAKIRIGESVSGCDERVITIFSSSRETNTL-VDAE--DK--VCPAQDALFRVHEK 55
Query: 122 IANAVANATDNDKKRKEKEE------CQILVPSSQSANIIGKAGATIKRLRSKTRTSIKV 175
++ D+D +E +E ++LVPS Q IIGK G I+ +RS T I+V
Sbjct: 56 LS------IDDDIGNEESDEGLAQVTVRLLVPSDQIGCIIGKGGHIIQGIRSDTGAHIRV 109
Query: 176 TPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPP 235
++E +CA+ D + ISG+S V+KAL +S+ ++ R L +++ +
Sbjct: 110 L---SNENLPACAISGDELLQISGDSTVVRKALLQVSSRLHDNPSRSQHLLASSMTQP-- 164
Query: 236 SIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQGY-ADTGNTWPVYSTGLS 294
YP + S + P + + GY D WP S
Sbjct: 165 ----------------YPVGSHLGSSSTAPVVGITPLISSYGGYKGDVAGDWP------S 202
Query: 295 LVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECV 354
+ S ++E +R+LC + +G VIGKGGG IK IRQ SGA I V D+ + D+C+
Sbjct: 203 IYQPRREESSAKEFSLRLLCAASNVGGVIGKGGGIIKQIRQESGAFIKV-DSSNTEDDCI 261
Query: 355 ITVTAIESPDDIKSMAVEAVLLLQTKINDEDD-----DTVTIRLLVSSKVIGCIIGKSGS 409
ITV+A E +D S + A + LQ + +++ D + T RLLVS+ IGC+IGK GS
Sbjct: 262 ITVSAKEFFEDPVSPTINAAVHLQPRCSEKTDPESAIPSYTTRLLVSTSRIGCLIGKGGS 321
Query: 410 IINEIRKRTKADVRI-SKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDR 468
II EIR+ ++A++RI SK + PK A ++E+V++ G++ VR AL+QI RL+ + +R
Sbjct: 322 IITEIRRTSRANIRILSKENVPKVAAEDEEMVQISGDLDVVRHALLQITTRLKANFF-ER 380
Query: 469 DGSRNPPVGADHIYSSGTGISMPPLLPSIP-PVG-------------PLGYDQRADSG 512
+G+ + PP++P P PVG PLG+D SG
Sbjct: 381 EGALS---------------GFPPVIPYHPLPVGVSEGPKYLGRDTKPLGHDYPYSSG 423
Score = 43.1 bits (100), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 10/60 (16%)
Query: 24 RINEK----DEKGNEES------VIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV 73
R++EK D+ GNEES V R+L P IG +IGK G +I IR +T A ++V+
Sbjct: 51 RVHEKLSIDDDIGNEESDEGLAQVTVRLLVPSDQIGCIIGKGGHIIQGIRSDTGAHIRVL 110
>gi|226530329|ref|NP_001151982.1| nucleic acid binding protein [Zea mays]
gi|195651499|gb|ACG45217.1| nucleic acid binding protein [Zea mays]
gi|224029689|gb|ACN33920.1| unknown [Zea mays]
gi|413947861|gb|AFW80510.1| nucleic acid binding protein [Zea mays]
Length = 705
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 153/518 (29%), Positives = 247/518 (47%), Gaps = 60/518 (11%)
Query: 128 NATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSC 187
N T N ++LV SQ+ ++GK G+ +K++ + I+V + SC
Sbjct: 221 NETGNASAASAPVSLRMLVLYSQAGWLLGKGGSVVKQMAADNGCEIRVLKDNLP----SC 276
Query: 188 AMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYP 247
A+ D I+GE ++V+K L A+S ++ P+E + V + S P
Sbjct: 277 ALLNDKLCQITGEIDSVRKGLNAVSEVLLAHPPKETDAV-ADVHSSGSSSRSLFSQPDGL 335
Query: 248 PGGLYPNADPILPSRSVPSIL-GAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSE 306
P G+ N +P + PS G + DLQ P++ + E
Sbjct: 336 PSGMQSNFH--IPLQGPPSQANGPFDIVDLQP--------PIHGHASVAI---------E 376
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
L R+LCP +K+G +IGKGG +K+I+ +G +I V DT D+ +I+++ P D
Sbjct: 377 SLSFRMLCPQDKVGSIIGKGGNIVKTIQNDTGCEIKVLDTVPKTDDRIISISGPAHPSDG 436
Query: 367 KSMAVEAVLLLQTKI----NDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADV 422
S A A+L +Q KI +D+ + T RL+VS +GC++GK GSII E+RK + A +
Sbjct: 437 ISPAQNAILHVQRKIMLPSSDKKEGPATCRLIVSGNQVGCVLGKGGSIIAEMRKLSGAFI 496
Query: 423 RISKGDK-PKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHI 481
+ DK P+ +DE++++ G ++++AL+Q+ RLR+ +D R P VG +
Sbjct: 497 VVLSKDKIPRGVPEHDEVIQINGSCEAIQEALMQVTARLRNHLFRD----RMPAVGPN-- 550
Query: 482 YSSGTGISMPPLLPSIPPVGPLGYDQRADS-------GSGI-GMLSSSSLYGYGSLSMGD 533
PP P GP + + S G + G+ + ++ G LS
Sbjct: 551 -------MRPPFGLLDPQFGPFSGNHESSSLFHKDFMGRPLDGIAAPWTVKGMRDLSDPV 603
Query: 534 SPYGSMSSYSSKLYGGLP--------PPLTLEVLVPANAVGKVIGKAGSNLANIRKISGA 585
S + + GG P P LT EVLVP + + G+ G L IR+ S A
Sbjct: 604 S-ISDIPGAGHREAGGFPGPGQPSMMPNLTAEVLVPRLVIPVLCGEDGGCLDRIREFSEA 662
Query: 586 TIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFIMA 623
I +++ + D LISGTPEQ AA +L++AF+M+
Sbjct: 663 KITVAEPTADAMDTAVLISGTPEQMHAARSLVEAFVMS 700
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 155/354 (43%), Gaps = 36/354 (10%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIY--SHVKD 92
ES+ +R+LCP +GS+IGK G ++ +I+ +T +KV+D P DR+++I +H D
Sbjct: 376 ESLSFRMLCPQDKVGSIIGKGGNIVKTIQNDTGCEIKVLDTVPKTDDRIISISGPAHPSD 435
Query: 93 KEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSA 152
+ AQ+A+L V I ++ K++ C+++V +Q
Sbjct: 436 G--------------ISPAQNAILHVQRKIMLPSSD------KKEGPATCRLIVSGNQVG 475
Query: 153 NIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAIS 212
++GK G+ I +R + I V KD E D + I+G EA+++AL ++
Sbjct: 476 CVLGKGGSIIAEMRKLSGAFIVVLSKDK---IPRGVPEHDEVIQINGSCEAIQEALMQVT 532
Query: 213 AIMYKFSPREDIPLETTVREAPPSIIIPSDVPI---YPPGGLYPNADPILPSRSVPSILG 269
A + R+ +P P ++ P P + L+ + D R + I
Sbjct: 533 ARLRNHLFRDRMPAVGPNMRPPFGLLDPQFGPFSGNHESSSLF-HKD--FMGRPLDGIAA 589
Query: 270 AARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSE---ELVIRVLCPFNKIGRVIGKG 326
V ++ +D + + G G G Q L VL P I + G+
Sbjct: 590 PWTVKGMRDLSDPVSISDIPGAGHREAGGFPGPGQPSMMPNLTAEVLVPRLVIPVLCGED 649
Query: 327 GGTIKSIRQASGAQIDV-DDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQT 379
GG + IR+ S A+I V + T D D V+ E +S+ VEA ++ ++
Sbjct: 650 GGCLDRIREFSEAKITVAEPTADAMDTAVLISGTPEQMHAARSL-VEAFVMSES 702
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 53/94 (56%), Gaps = 5/94 (5%)
Query: 6 KRYRSQRDNDRDGKNQKRRINEKDEKGNEESV-----IYRILCPDGVIGSVIGKSGKVIN 60
KR +R +D DG+ + ++ ++ + I+RILCP G+VIGK G +I
Sbjct: 9 KRPFQRRSSDYDGRGKWQKTKHPSPHKSQFKIEPGVPIFRILCPASKSGNVIGKGGAIIA 68
Query: 61 SIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKE 94
IRQETR R++V PG +RV+ I + KD+E
Sbjct: 69 KIRQETRMRIRVDRAAPGCDERVIFITAANKDEE 102
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 31/51 (60%)
Query: 309 VIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTA 359
+ R+LCP +K G VIGKGG I IRQ + +I VD DE VI +TA
Sbjct: 46 IFRILCPASKSGNVIGKGGAIIAKIRQETRMRIRVDRAAPGCDERVIFITA 96
Score = 40.0 bits (92), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 25/33 (75%)
Query: 143 QILVPSSQSANIIGKAGATIKRLRSKTRTSIKV 175
+IL P+S+S N+IGK GA I ++R +TR I+V
Sbjct: 48 RILCPASKSGNVIGKGGAIIAKIRQETRMRIRV 80
>gi|79317957|ref|NP_001031044.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|222424209|dbj|BAH20063.1| AT1G14170 [Arabidopsis thaliana]
gi|332190994|gb|AEE29115.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 446
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 142/443 (32%), Positives = 228/443 (51%), Gaps = 61/443 (13%)
Query: 33 NEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKD 92
N +YR LCP GS+IGK G++ IR ET++ +++ + PG ++RVVT+YS
Sbjct: 7 NIHDTVYRYLCPVKKTGSIIGKGGEIAKQIRSETKSNMRINEALPGCEERVVTMYS---- 62
Query: 93 KEDVEVDDEFNDKEPLCAAQDALLKVH----AAIANAVANATDNDKKRKEKEECQILVPS 148
+ E++ +D E +C A DAL KVH A DND K+ ++LVPS
Sbjct: 63 -TNEELNHFGDDGELVCPALDALFKVHDMVVADADQDDGTDDDNDLGEKQTVTVRMLVPS 121
Query: 149 SQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKAL 208
Q +IGK G I+ LR+ T I+V KD P + + D +LI GE V++AL
Sbjct: 122 DQIGCVIGKGGQVIQNLRNDTNAQIRVI-KD-HLPACALTLSHDELLLIIGEPLVVREAL 179
Query: 209 FAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSIL 268
+ ++++++ R ++ S ++ PG + ++
Sbjct: 180 YQVASLLHDNPSR-----------FQHLLLSSSSSSMHQPGAM---------------LM 213
Query: 269 GAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGG 328
AA + YA + + + E + +CP +G VIGKGGG
Sbjct: 214 SAALTSSHRNYAVRRDI-----------------ADAREFCVCFICPAENVGGVIGKGGG 256
Query: 329 TIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKIN-----D 383
I IRQ +GA I V+ ++ + D+C+I +++ E +D +S AV A + LQ + + D
Sbjct: 257 FINQIRQETGATIRVNTSETDDDDCIIFISSKEFYED-QSPAVNAAIRLQQRCSEKVGKD 315
Query: 384 EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRI-SKGDKPKCADANDELVEV 442
+D ++ RLLVSS IGC+IGK G++I+E+R T+A++RI K D PK A ++E+V++
Sbjct: 316 ANDLAISTRLLVSSSQIGCLIGKGGAVISEMRSVTRANIRILQKEDVPKIAREDEEMVQI 375
Query: 443 VGEVGSVRDALVQIILRLRDDAL 465
G + AL Q+ILRLR ++
Sbjct: 376 TGSPDAAMKALTQVILRLRANSF 398
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 140/326 (42%), Gaps = 75/326 (23%)
Query: 306 EELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESP-- 363
+ V R LCP K G +IGKGG K IR + + + +++ +E V+T+ +
Sbjct: 9 HDTVYRYLCPVKKTGSIIGKGGEIAKQIRSETKSNMRINEALPGCEERVVTMYSTNEELN 68
Query: 364 ---DD--IKSMAVEAVLLLQTKINDE------------------DDDTVTIRLLVSSKVI 400
DD + A++A+ K++D + TVT+R+LV S I
Sbjct: 69 HFGDDGELVCPALDALF----KVHDMVVADADQDDGTDDDNDLGEKQTVTVRMLVPSDQI 124
Query: 401 GCIIGKSGSIINEIRKRTKADVRISKGDKPKCAD--ANDELVEVVGEVGSVRDALVQIIL 458
GC+IGK G +I +R T A +R+ K P CA ++DEL+ ++GE VR+AL Q+
Sbjct: 125 GCVIGKGGQVIQNLRNDTNAQIRVIKDHLPACALTLSHDELLLIIGEPLVVREALYQVAS 184
Query: 459 RLRDDALKDRDGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGML 518
L D+ P H+ S + SM
Sbjct: 185 LLHDN-----------PSRFQHLLLSSSSSSM---------------------------- 205
Query: 519 SSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLAN 578
+ G++ M + S +Y+ + + + PA VG VIGK G +
Sbjct: 206 -----HQPGAMLMSAALTSSHRNYAVRRDIADAREFCVCFICPAENVGGVIGKGGGFINQ 260
Query: 579 IRKISGATIEMSDSKSSRGDRVALIS 604
IR+ +GATI ++ S++ D + IS
Sbjct: 261 IRQETGATIRVNTSETDDDDCIIFIS 286
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 32 GNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGA 79
G +++V R+L P IG VIGK G+VI ++R +T A+++V+ D P
Sbjct: 108 GEKQTVTVRMLVPSDQIGCVIGKGGQVIQNLRNDTNAQIRVIKDHLPAC 156
>gi|255584811|ref|XP_002533123.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223527086|gb|EEF29268.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 405
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 135/399 (33%), Positives = 195/399 (48%), Gaps = 56/399 (14%)
Query: 130 TDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAM 189
+D+D + + +++VPS Q IIGK G ++ +RS+T I++ + P CA+
Sbjct: 3 SDDDSEGGHQVTARLIVPSDQIGCIIGKGGQIVQNIRSETGAQIRILKDEHLPP---CAL 59
Query: 190 EFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPG 249
D V ISGE VKKAL+ I+ +++ R L + V +YP
Sbjct: 60 STDELVQISGEVAVVKKALYQIATRLHENPSRTQHLLFSAVPN------------VYPAT 107
Query: 250 G--LYPNADPILPSRSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEE 307
G + P PI+ + S G GY W SL S S+E
Sbjct: 108 GSLIGPTGAPIVGIAPLMSTYG--------GYKGDAGDW-----SRSLYSAPRDELSSKE 154
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
+R++CP IG VIGKGG I IRQ SGA I VD + D+C+ITV+A E DD
Sbjct: 155 FSLRIVCPTGNIGGVIGKGGTIINQIRQESGAVIKVDSSTAEGDDCLITVSAKEFFDDQY 214
Query: 368 SMAVEAVLLLQTKIN-----DEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADV 422
S +EA + LQ + + D + T RLLV + IGC++GK G IINE+RK TKA++
Sbjct: 215 SPTIEAAIRLQPRCSEKIARDSGLISFTTRLLVPTSRIGCLLGKGGVIINEMRKVTKANI 274
Query: 423 RI-SKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHI 481
RI K + PK A +DE+V++ G++ +DAL + RLR +A DR+G+ +
Sbjct: 275 RILGKDNLPKVASEDDEMVQISGDLDVAKDALTHVSRRLRANAF-DREGAVS-------- 325
Query: 482 YSSGTGISMPPLLPSIPPVG----PLGYDQRADSGSGIG 516
+ P+LP +P L YD R G G
Sbjct: 326 -------TFLPVLPYLPVSADGSDSLNYDSRDSKRHGRG 357
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/221 (36%), Positives = 111/221 (50%), Gaps = 33/221 (14%)
Query: 385 DDDT-----VTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDK-PKCADANDE 438
DDD+ VT RL+V S IGCIIGK G I+ IR T A +RI K + P CA + DE
Sbjct: 4 DDDSEGGHQVTARLIVPSDQIGCIIGKGGQIVQNIRSETGAQIRILKDEHLPPCALSTDE 63
Query: 439 LVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSGTGISMPPLLPSIP 498
LV++ GEV V+ AL QI RL ++ P H+ S ++P + P+
Sbjct: 64 LVQISGEVAVVKKALYQIATRLHEN-----------PSRTQHLLFS----AVPNVYPATG 108
Query: 499 P-VGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLE 557
+GP G GI L S+ YG GD+ S S YS+ +L
Sbjct: 109 SLIGPTGAPI-----VGIAPLMST----YGGYK-GDAGDWSRSLYSAPRDELSSKEFSLR 158
Query: 558 VLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGD 598
++ P +G VIGK G+ + IR+ SGA I++ DS ++ GD
Sbjct: 159 IVCPTGNIGGVIGKGGTIINQIRQESGAVIKV-DSSTAEGD 198
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 89/185 (48%), Gaps = 21/185 (11%)
Query: 28 KDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIY 87
+DE ++E + RI+CP G IG VIGK G +IN IRQE+ A +KV D ++T+
Sbjct: 147 RDELSSKEFSL-RIVCPTGNIGGVIGKGGTIINQIRQESGAVIKVDSSTAEGDDCLITVS 205
Query: 88 SHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVP 147
+ EF D + +A +++ + +A + ++LVP
Sbjct: 206 AK-----------EFFDDQ-YSPTIEAAIRLQPRCSEKIARDSG-----LISFTTRLLVP 248
Query: 148 SSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKA 207
+S+ ++GK G I +R T+ +I++ KD A E D V ISG+ + K A
Sbjct: 249 TSRIGCLLGKGGVIINEMRKVTKANIRILGKDN---LPKVASEDDEMVQISGDLDVAKDA 305
Query: 208 LFAIS 212
L +S
Sbjct: 306 LTHVS 310
>gi|356496890|ref|XP_003517298.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 602
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 164/606 (27%), Positives = 287/606 (47%), Gaps = 71/606 (11%)
Query: 37 VIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDV 96
+ +R++C +G +IG SG +++ +R+ET ++ D A+DRV+ + + ++ +
Sbjct: 41 IAFRLVCHASTVGGLIGSSGSIVSQLRRETGCKIHCEDSLSSAEDRVILVIGSLSPRKGL 100
Query: 97 EVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKE-ECQILVPSSQSANII 155
+ D + + +AQ+A+++V + + A N + E ++L +SQ ++
Sbjct: 101 LLGD--GGEVEVSSAQEAVVRVFERVWDLEAEKGVNSNRAVNGEVFSKLLAHTSQIGAVV 158
Query: 156 GKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIM 215
GK G I +R+ T I+V P CA + + V I+G AVKKAL ++S +
Sbjct: 159 GKGGKNITAIRNNTGAKIRVFPPP------QCATKDEELVQITGGILAVKKALISVSHCL 212
Query: 216 YKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPD 275
P +P+ ++ S + SD P L+P+ + +L S SI
Sbjct: 213 QDCPPLCKVPVTSSTPTVSSSDRLSSD----PNAELFPHLNSLLTSMEGLSI-------- 260
Query: 276 LQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQ 335
Y T N+ + S E+V R+LC N G VIGK G ++++
Sbjct: 261 ---YERTTNS--------NETSNRDSKGAEHEVVFRLLCSNNVAGSVIGKRGAIVRALES 309
Query: 336 ASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKINDED---------- 385
+GA I E ++T++A+ES + S A +AV+L+ +I ++
Sbjct: 310 KTGASIIFAAPLSEHAERIVTISAVESLESCNSPAQDAVILVFARIIEDHIGKGFLQVSS 369
Query: 386 -DDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDK-PKCADANDELVEVV 443
+ VT RLLV++ + C G G +I+E+R+ T AD++I G+ P A D +V++
Sbjct: 370 MESPVTARLLVATSTVNCFSGNEGQVISELREVTGADIQILHGESVPNGASDEDVVVQIT 429
Query: 444 GEVGSVRDALVQIILRLRD-----DALKDRDGSRNPPVGADHIYSS--GTGISMPPLLPS 496
GE V++AL +I R+RD + + + N V D I G S P
Sbjct: 430 GEYRCVQNALYKITSRIRDNLSPNEVVAEARPKSNWKVNKDPIKGKPFARGKSAFPSGRF 489
Query: 497 IPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTL 556
+P + + +G LS + G G++ + ++++ T+
Sbjct: 490 LPRNAGVHAETILQNGELHTDLSENLERGRGNM------FATVTNT------------TV 531
Query: 557 EVLVPANAVGKVIGKAGSNLANIRKISGATIEMSD-SKSSRGDRVALISGTPEQKRAAEN 615
E++V + G V G+ G NL IR+ISGA + + D S + G +V +ISGTP+Q AA++
Sbjct: 532 EIIVSEHVFGSVYGEDGGNLDRIRQISGAIVTVYDPSVGTSGGKV-VISGTPDQTFAAQS 590
Query: 616 LIQAFI 621
L+QAFI
Sbjct: 591 LLQAFI 596
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 92/322 (28%), Positives = 136/322 (42%), Gaps = 32/322 (9%)
Query: 28 KDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIY 87
+D KG E V++R+LC + V GSVIGK G ++ ++ +T A + P +R+VTI
Sbjct: 273 RDSKGAEHEVVFRLLCSNNVAGSVIGKRGAIVRALESKTGASIIFAAPLSEHAERIVTIS 332
Query: 88 SHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHA-AIANAVANATDNDKKRKEKEECQILV 146
+ VE + N AQDA++ V A I + + + ++LV
Sbjct: 333 A-------VESLESCNSP-----AQDAVILVFARIIEDHIGKGFLQVSSMESPVTARLLV 380
Query: 147 PSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKK 206
+S G G I LR T I++ E + A + D V I+GE V+
Sbjct: 381 ATSTVNCFSGNEGQVISELREVTGADIQIL---HGESVPNGASDEDVVVQITGEYRCVQN 437
Query: 207 ALFAISA-IMYKFSPREDIPLETTVREA-PPSIIIPSDVPIYPPGGLYPNADPILPS-RS 263
AL+ I++ I SP E V EA P S + PI G + PS R
Sbjct: 438 ALYKITSRIRDNLSPNE------VVAEARPKSNWKVNKDPI--KGKPFARGKSAFPSGRF 489
Query: 264 VPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVI 323
+P G LQ G S L G + A+ + V ++ + G V
Sbjct: 490 LPRNAGVHAETILQ----NGELHTDLSENLERGRGNMFATVTNTTV-EIIVSEHVFGSVY 544
Query: 324 GKGGGTIKSIRQASGAQIDVDD 345
G+ GG + IRQ SGA + V D
Sbjct: 545 GEDGGNLDRIRQISGAIVTVYD 566
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 140/319 (43%), Gaps = 47/319 (14%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESP--- 363
++ R++C + +G +IG G + +R+ +G +I +D+ + ++ VI V SP
Sbjct: 40 QIAFRLVCHASTVGGLIGSSGSIVSQLRRETGCKIHCEDSLSSAEDRVILVIGSLSPRKG 99
Query: 364 ------DDIK-SMAVEAVLLLQTKINDED-----------DDTVTIRLLVSSKVIGCIIG 405
+++ S A EAV+ + ++ D + + V +LL + IG ++G
Sbjct: 100 LLLGDGGEVEVSSAQEAVVRVFERVWDLEAEKGVNSNRAVNGEVFSKLLAHTSQIGAVVG 159
Query: 406 KSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDAL 465
K G I IR T A +R+ P+CA ++ELV++ G + +V+ AL+ + L+D
Sbjct: 160 KGGKNITAIRNNTGAKIRVFP--PPQCATKDEELVQITGGILAVKKALISVSHCLQD--- 214
Query: 466 KDRDGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYG 525
PP+ + SS +S L S P + +S L
Sbjct: 215 -------CPPLCKVPVTSSTPTVSSSDRLSSDPNAELFPH-------------LNSLLTS 254
Query: 526 YGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGA 585
LS+ + S + S++ G + +L N G VIGK G+ + + +GA
Sbjct: 255 MEGLSIYERTTNS-NETSNRDSKGAEHEVVFRLLCSNNVAGSVIGKRGAIVRALESKTGA 313
Query: 586 TIEMSDSKSSRGDRVALIS 604
+I + S +R+ IS
Sbjct: 314 SIIFAAPLSEHAERIVTIS 332
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 546 LYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISG 605
++ LP + ++ A+ VG +IG +GS ++ +R+ +G I DS SS DRV L+ G
Sbjct: 33 VFKVLPGQIAFRLVCHASTVGGLIGSSGSIVSQLRRETGCKIHCEDSLSSAEDRVILVIG 92
Query: 606 T 606
+
Sbjct: 93 S 93
>gi|147863214|emb|CAN78372.1| hypothetical protein VITISV_006585 [Vitis vinifera]
Length = 807
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 191/688 (27%), Positives = 298/688 (43%), Gaps = 168/688 (24%)
Query: 36 SVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKED 95
+V R+L P +G V+G+ GK++ IRQE+ GA+ RV+
Sbjct: 182 AVCCRLLAPSNQVGCVLGRGGKIVEKIRQES-----------GAQIRVLP---------- 220
Query: 96 VEVDDEFNDKEPLCAAQ-DALLK--VHAAIANAVANATDNDKKRKEKEECQILVPSSQSA 152
D P CA+ D L++ + R +E +++
Sbjct: 221 -------KDHIPACASPGDELIQGSMKRKGGVGRVVGGCCCCSRALREGYGVVL-----W 268
Query: 153 NIIGKAGATIKRLRSKTRTSIKVTPKD--ASEPTHSCAMEFDNFVL-------------- 196
+G+ ++RL+ + IK +D S + C+ +F
Sbjct: 269 KKLGEVETLLRRLQGQV---IKGGAEDIMGSRLSKGCSFAVKSFYSLASRFLKGFPTSIM 325
Query: 197 -------ISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPG 249
I+G AV+KAL +S+ + +PR D + P G
Sbjct: 326 WNPWGPNITGTFPAVRKALLLVSSCLQD-NPRADATNSAAAK---------------PTG 369
Query: 250 GLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGL--VGASQ--- 304
G+ L +P L + P +GY + + +S G S + G +GA+
Sbjct: 370 GM-------LHGNGMPGQLDS--FPQ-RGYGSSLHGPDYHSRGYSSMPGPENIGANHRMV 419
Query: 305 -SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIES- 362
EE+V ++LC F K+G +IGKGG I+ ++ +GA I + D + DE V+ ++A E+
Sbjct: 420 LEEEVVFKLLCHFEKVGSLIGKGGSIIRXLQSETGASIKIADAAPDSDERVVVISAREAC 479
Query: 363 ----PDDIKSMAVEAVLLLQTKIND---EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIR 415
+ S A +AV+ + +I + E V RLLV S+ IGC++GK G II+E+R
Sbjct: 480 TLTNXEQKHSPAQDAVIRVHCRIAEIGFEPGAAVVARLLVHSQQIGCLLGKGGIIISEMR 539
Query: 416 KRTKADVRI-SKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRN- 473
+ T A +RI +K PKC NDELV+V+G + SV+DAL I R+R+ + N
Sbjct: 540 RATGASIRIFAKEQVPKCGSQNDELVQVIGSLQSVQDALFCITSRIRETIFPLKPSISNV 599
Query: 474 --PPVGADHIYSSGTGISMPPLL-----PSIP-----PVG-PLGYDQRADSGS------- 513
PP Y S PP+ P+ P PVG P G D+ A G
Sbjct: 600 NGPP------YMSSFPEIPPPMFRPRHDPASPGHYSSPVGVPHGIDRSAVPGHPLDHQSS 653
Query: 514 ---GIGMLSSSSL----YGYGSLSMGDSPYGSMSSYSSKLY----------------GGL 550
G+ + S+L Y YG G P S S +++ GGL
Sbjct: 654 FSHGVDRIGPSNLDRAPYPYGGDRPGHGPPFDRPSSSPRMWTPQGVSGNLRGTDVGSGGL 713
Query: 551 P----PP-----------LTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSS 595
PP T+EV VP + V G+ SNL IR+ISGA + + D ++
Sbjct: 714 ASRSGPPGSGSQAPNITXTTVEVAVPQALLSHVYGENNSNLNQIRQISGARVVIQDPRTG 773
Query: 596 RGDRVALISGTPEQKRAAENLIQAFIMA 623
+ V ++SGTP+Q RAA++L+QAFI++
Sbjct: 774 SSEGVVVVSGTPDQTRAAQSLVQAFILS 801
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 106/399 (26%), Positives = 168/399 (42%), Gaps = 75/399 (18%)
Query: 34 EESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDK 93
EE V++++LC +GS+IGK G +I ++ ET A +K+ D P + +RVV I + +
Sbjct: 421 EEEVVFKLLCHFEKVGSLIGKGGSIIRXLQSETGASIKIADAAPDSDERVVVISA----R 476
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
E + + P AQDA+++VH IA R +LV S Q
Sbjct: 477 EACTLTNXEQKHSP---AQDAVIRVHCRIAEIGFEPGAAVVAR-------LLVHSQQIGC 526
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISA 213
++GK G I +R T SI++ A E C + D V + G ++V+ ALF I++
Sbjct: 527 LLGKGGIIISEMRRATGASIRIF---AKEQVPKCGSQNDELVQVIGSLQSVQDALFCITS 583
Query: 214 ----IMYKFSPR----EDIPLETTVREAPPSIIIPSDVPIYP---------PGGLYPNAD 256
++ P P ++ E PP + P P P P G+ +A
Sbjct: 584 RIRETIFPLKPSISNVNGPPYMSSFPEIPPPMFRPRHDPASPGHYSSPVGVPHGIDRSAV 643
Query: 257 PILP-----------SRSVPSILGAARVP---DLQGY-------ADTGNTWP-------- 287
P P R PS L A P D G+ + + W
Sbjct: 644 PGHPLDHQSSFSHGVDRIGPSNLDRAPYPYGGDRPGHGPPFDRPSSSPRMWTPQGVSGNL 703
Query: 288 ----VYSTGLSLVSGLVGA-SQSEEL---VIRVLCPFNKIGRVIGKGGGTIKSIRQASGA 339
V S GL+ SG G+ SQ+ + + V P + V G+ + IRQ SGA
Sbjct: 704 RGTDVGSGGLASRSGPPGSGSQAPNITXTTVEVAVPQALLSHVYGENNSNLNQIRQISGA 763
Query: 340 QIDVDDTKDNRDECVITVTAIESPDDIKSMA--VEAVLL 376
++ + D + E V+ V+ +PD ++ V+A +L
Sbjct: 764 RVVIQDPRTGSSEGVVVVSG--TPDQTRAAQSLVQAFIL 800
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 82/182 (45%), Gaps = 47/182 (25%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTA------- 359
+++ R+LCP K G VIGKGG I+ R+ +GA+I +DD+ DE VI + A
Sbjct: 55 QVLFRILCPATKTGGVIGKGGAIIRQFREDTGAKIRIDDSVLGCDERVILIVADAVKSKR 114
Query: 360 --------------------------IESPDDIKSMAVEAVLLLQTKI------------ 381
+ DD S A +A++ + +I
Sbjct: 115 EASAICGAEANDGEESANLSNSSPNPVAVDDDESSPAQQALVRVFERILKVDEEREEKEK 174
Query: 382 -NDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDK-PKCADANDEL 439
D + V RLL S +GC++G+ G I+ +IR+ + A +R+ D P CA DEL
Sbjct: 175 KEDLGNVAVCCRLLAPSNQVGCVLGRGGKIVEKIRQESGAQIRVLPKDHIPACASPGDEL 234
Query: 440 VE 441
++
Sbjct: 235 IQ 236
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 86/183 (46%), Gaps = 27/183 (14%)
Query: 37 VIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYS-HVKDKED 95
V++RILCP G VIGK G +I R++T A++++ D G +RV+ I + VK K +
Sbjct: 56 VLFRILCPATKTGGVIGKGGAIIRQFREDTGAKIRIDDSVLGCDERVILIVADAVKSKRE 115
Query: 96 VE--VDDEFNDKE-----------PLCA-------AQDALLKVHAAIANAVANATDNDKK 135
E ND E P+ AQ AL++V I + +KK
Sbjct: 116 ASAICGAEANDGEESANLSNSSPNPVAVDDDESSPAQQALVRVFERILKVDEEREEKEKK 175
Query: 136 RKEKEE---CQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFD 192
C++L PS+Q ++G+ G ++++R ++ I+V PKD +CA D
Sbjct: 176 EDLGNVAVCCRLLAPSNQVGCVLGRGGKIVEKIRQESGAQIRVLPKDH---IPACASPGD 232
Query: 193 NFV 195
+
Sbjct: 233 ELI 235
>gi|357124311|ref|XP_003563844.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 666
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 164/614 (26%), Positives = 282/614 (45%), Gaps = 71/614 (11%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKE 94
++ +RILCP+ G I + ++ A + + PF G RV+ + V
Sbjct: 91 QATSFRILCPES---KTYGFPASFIIKAQDDSGAIITIHAPFAGDPVRVIEMADGVPRDV 147
Query: 95 DVEVDDEFNDKEPLCA-AQDALLKVHAAIANAVANATDND---------KKRKEKEECQI 144
D + P+ + AQ+AL+ VH I + D D + + K ++
Sbjct: 148 D--------GRPPMFSPAQEALIMVHRRILETEPDDGDEDGEYGPRGKDARDRGKVTTRL 199
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAV 204
+VP ++GK G I+++RS+T+T I++ P+D + P C + V I GE V
Sbjct: 200 VVPRLHVGCLLGKGGKIIEQMRSETKTHIRILPRDQNTP--RCVSLSEEVVQIVGEGNCV 257
Query: 205 KKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNA--DPILPSR 262
KKA+ IS + + R+ P R +P I +D P P A D I +
Sbjct: 258 KKAVAIISDRLKESLHRDRGPFRG--RNSPEHRISQADEYQQMPAYEEPFARFDQIRNN- 314
Query: 263 SVPSILGAARVP--DLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIG 320
G+ P + N P + +E++ R+LCP +K
Sbjct: 315 ------GSMEPPGYEFDSNGSKFNEHPEFPY--------------DEIIFRILCPNDKAN 354
Query: 321 RVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTK 380
++G G ++ ++ G + + D DE + +T+ E PD A EA+L +QT
Sbjct: 355 NLVGSRDGILEMLQVEVGVDVRLTDLVVGSDERTVIITSREGPDHELFPAQEALLHIQTH 414
Query: 381 IND---EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRI-SKGDKPKCADAN 436
I D ++D+ +T RLLV S + C G+ GS+ ++I+++T A+V+I + + P CA +
Sbjct: 415 IVDLGPDNDNIITTRLLVPSSEVACFEGRDGSL-SDIQRQTSANVQILPREELPSCALES 473
Query: 437 DELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSGTGISMPPLLPS 496
DEL+++VG + + R AL+Q+ ++R ++ + I S S+PP S
Sbjct: 474 DELIQIVGGIRAARSALMQVTTKIRSYIYREMSV-------PNQIASINVHGSIPPANGS 526
Query: 497 IPPVG-------PLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGG 549
P G P+ Q++ + S GS G + + S +
Sbjct: 527 --PRGIYPGNDLPMAIYQQSQQMTTSWHSKDSGGSASGSFEQGSNINDDIRSTIKRFAVP 584
Query: 550 LPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQ 609
L TLEV++P +AV + +AGS LA I ++SGA++ + + + ++V ISGTPEQ
Sbjct: 585 LVTRSTLEVVIPKSAVASLSMRAGSKLAQISEMSGASVTLGEDRPGVMEKVVRISGTPEQ 644
Query: 610 KRAAENLIQAFIMA 623
A++L+Q FI++
Sbjct: 645 ADKAQSLLQGFILS 658
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 89/368 (24%), Positives = 159/368 (43%), Gaps = 44/368 (11%)
Query: 24 RINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRV 83
+ NE E +E +I+RILCP+ +++G ++ ++ E V++ D G+ +R
Sbjct: 330 KFNEHPEFPYDE-IIFRILCPNDKANNLVGSRDGILEMLQVEVGVDVRLTDLVVGSDERT 388
Query: 84 VTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQ 143
V I S E D E L AQ+ALL + I + DND +
Sbjct: 389 VIITSR-----------EGPDHE-LFPAQEALLHIQTHIVDL---GPDNDNIITTR---- 429
Query: 144 ILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEA 203
+LVPSS+ A G+ G ++ ++ +T ++++ P+ E SCA+E D + I G A
Sbjct: 430 LLVPSSEVACFEGRDG-SLSDIQRQTSANVQILPR---EELPSCALESDELIQIVGGIRA 485
Query: 204 VKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIY--PPGGLYPNAD-PILP 260
+ AL ++ + + R E +V SI + +P P G+YP D P+
Sbjct: 486 ARSALMQVTTKIRSYIYR-----EMSVPNQIASINVHGSIPPANGSPRGIYPGNDLPMAI 540
Query: 261 SRSVPSILGAARVPDLQGYA----DTGNTW--PVYSTGLSLVSGLVGASQSEELVIRVLC 314
+ + + D G A + G+ + ST LV S + V+
Sbjct: 541 YQQSQQMTTSWHSKDSGGSASGSFEQGSNINDDIRSTIKRFAVPLVTRS-----TLEVVI 595
Query: 315 PFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAI-ESPDDIKSMAVEA 373
P + + + + G + I + SGA + + + + E V+ ++ E D +S+
Sbjct: 596 PKSAVASLSMRAGSKLAQISEMSGASVTLGEDRPGVMEKVVRISGTPEQADKAQSLLQGF 655
Query: 374 VLLLQTKI 381
+L +Q I
Sbjct: 656 ILSIQDDI 663
>gi|357128987|ref|XP_003566150.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 729
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 155/571 (27%), Positives = 269/571 (47%), Gaps = 66/571 (11%)
Query: 91 KDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIA-NAVANATDNDKKRKEKEECQILVPSS 149
KD V D + + L + +A+L V I + N + + + ++LV S
Sbjct: 182 KDDPSVAKDTKAEPERVLLSPMNAILHVFDRIFITEIGNESGDPSGERTPVSFRLLVLDS 241
Query: 150 QSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALF 209
Q ++G G+ IK++ + + I+V+ E CA+ D I+GE ++V+K L
Sbjct: 242 QVGWLLGNRGSVIKQMSADSGCEIRVS----KEKLPLCALLKDELCQITGELDSVRKGLN 297
Query: 210 AISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYP-------PGGLYPNAD-PIL-P 260
A++ ++ PRE S ++PS + + P G+ PN P P
Sbjct: 298 AVAQVLLTHPPRE-------------SDVLPSGLSSHAFNRSDALPPGMQPNFSLPFQGP 344
Query: 261 SRS---VPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFN 317
S + SI +P + D + P + + + E L R+LC +
Sbjct: 345 SHARGPFDSIDPRPNIPPFPTFPDQRSNIPPFPAFPDALMHSHASVPPEPLTFRLLCSSD 404
Query: 318 KIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVLLL 377
K+G +IGKGG IK+I++ +G +I + +T ++ VI ++ P D S A A+L +
Sbjct: 405 KVGSIIGKGGNNIKTIQKDTGCEIKILETVPKSEDRVIVISGPAHPGDGISPAQNAILHV 464
Query: 378 QTKI-----NDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDK-PK 431
Q +I N+++ ++ RL+VS +GC++GK GSII E+RK +KA + + DK PK
Sbjct: 465 QRRITPPTANNKEGAAIS-RLIVSPNQVGCLLGKGGSIIAEMRKLSKAHIVVLSKDKIPK 523
Query: 432 CADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSR----NPPVGA-DHIYSSGT 486
+DE+V++ G+ ++++AL+QI RLR+ +DR + PP G+ D + +
Sbjct: 524 GVQESDEVVQITGDSEAIQEALMQITARLRNHLFRDRMAAMGPNMQPPFGSLDPQFGAFA 583
Query: 487 GISMPPLLPSIPPVGPLGY--------DQRADSGSGIGM------LSSSSLYGYGSLSMG 532
G S P I P + D+ + GM +S S + G
Sbjct: 584 G-SHESTSPRIYPNASQFHKDFMGRPLDEMPAPWNAKGMRDVGDPMSISGMPGM------ 636
Query: 533 DSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDS 592
P+ + +S + +P +T +++VP + + G G L IR+ SGA I ++
Sbjct: 637 --PHRGIGGFSGAGHSSMPN-ITRDIMVPRFVIPALCGHDGGCLNMIREFSGAMITFTEP 693
Query: 593 KSSRGDRVALISGTPEQKRAAENLIQAFIMA 623
+ D +ISGT +Q AA +LIQAF+++
Sbjct: 694 IADAADTPFMISGTLDQMHAARSLIQAFVLS 724
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 142/329 (43%), Gaps = 55/329 (16%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIY--SHVKD 92
E + +R+LC +GS+IGK G I +I+++T +K+++ P ++DRV+ I +H D
Sbjct: 393 EPLTFRLLCSSDKVGSIIGKGGNNIKTIQKDTGCEIKILETVPKSEDRVIVISGPAHPGD 452
Query: 93 KEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSA 152
+ AQ+A+L V I AN ++ +++V +Q
Sbjct: 453 G--------------ISPAQNAILHVQRRITPPTAN------NKEGAAISRLIVSPNQVG 492
Query: 153 NIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAIS 212
++GK G+ I +R ++ I V KD E D V I+G+SEA+++AL I+
Sbjct: 493 CLLGKGGSIIAEMRKLSKAHIVVLSKDK---IPKGVQESDEVVQITGDSEAIQEALMQIT 549
Query: 213 AIMYKFSPREDIPLETTVREAPPSIIIP-------SDVPIYPPGGLYPNADPIL------ 259
A + R+ + + P + P S P +YPNA
Sbjct: 550 ARLRNHLFRDRMAAMGPNMQPPFGSLDPQFGAFAGSHESTSP--RIYPNASQFHKDFMGR 607
Query: 260 PSRSVPSILGAARVPDLQGYADTGNTWPVYSTGLS-----LVSGLVGASQSE--ELVIRV 312
P +P+ A +G D G+ P+ +G+ + G GA S + +
Sbjct: 608 PLDEMPAPWNA------KGMRDVGD--PMSISGMPGMPHRGIGGFSGAGHSSMPNITRDI 659
Query: 313 LCPFNKIGRVIGKGGGTIKSIRQASGAQI 341
+ P I + G GG + IR+ SGA I
Sbjct: 660 MVPRFVIPALCGHDGGCLNMIREFSGAMI 688
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 33/53 (62%)
Query: 309 VIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIE 361
+IR+LCP K G VIGKGG I IRQ +G +I VD+ DE VI +T E
Sbjct: 46 LIRILCPTEKCGNVIGKGGVIIAKIRQENGVKIRVDEAVPGCDERVIVITITE 98
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 35/57 (61%)
Query: 38 IYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKE 94
+ RILCP G+VIGK G +I IRQE +++V + PG +RV+ I KDKE
Sbjct: 46 LIRILCPTEKCGNVIGKGGVIIAKIRQENGVKIRVDEAVPGCDERVIVITITEKDKE 102
>gi|326504604|dbj|BAK06593.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 531
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 151/485 (31%), Positives = 219/485 (45%), Gaps = 86/485 (17%)
Query: 197 ISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPG---GLYP 253
ISG A +KAL +S + +PR D + PS P PPG G P
Sbjct: 70 ISGSFSAARKALLLVSTCLQD-NPRPD------------TSNFPSGRPFGPPGSGVGCPP 116
Query: 254 NADPILPSRSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVL 313
DP S S L VPD + N + G +E+V R++
Sbjct: 117 GVDP----HSQRSYLPPPHVPDYHARNFSSNGA---APGPRFFV-------EQEIVFRMI 162
Query: 314 CPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEA 373
C + +G VIGKGG TI++++ +GA + V D + DE +I ++A E+ + ++S + +A
Sbjct: 163 CLNDMVGGVIGKGGSTIRALQSETGASVKVIDPVADSDERIIVISARENSEMMRSPSQDA 222
Query: 374 VLLLQTKINDEDDD---TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDK- 429
+L + +KI++ D +V RLLV ++ IGC++GK GSII E+RK T A +RI ++
Sbjct: 223 LLRVYSKISEASMDKSSSVPARLLVPAQHIGCLLGKGGSIIAEMRKLTGASIRIFGNEQI 282
Query: 430 PKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRN-----PPVG------- 477
P+CA NDELV+V G S++DAL+ I R+RD + + PPVG
Sbjct: 283 PRCAQRNDELVQVTGSFQSIQDALLHITGRIRDLIIPPKPHPSGGMPPYPPVGNPSHHQS 342
Query: 478 ---ADHIYSSGT-GISMPPLLPSIPPVGPLGYDQRADSGSGI-----GMLSSSSLYGYGS 528
A +S G M P P+ PP+GP G M + Y YG
Sbjct: 343 RQEAPSHHSGGMPPYPMHPFRPN-PPMGPFDVADPRPPGPPPSHPMEHMGADRMPYPYGC 401
Query: 529 LSMGDSPYGSMSS------------------------------YSSKLYGGLPPPLTLEV 558
G P+ S SS+ P T EV
Sbjct: 402 EQGGPRPFVEQPSPRTWAPEAPATDAPRSMPDTVPAVDFRKGPVSSENQVATPATTTTEV 461
Query: 559 LVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQ 618
++P +G V G GS+L I+KISGA I + D K + +I G PEQ + A++LI
Sbjct: 462 VIPCKYIGFVCGTNGSDLDEIKKISGAAITVHDPKPGDTNSTVIICGDPEQTKKAQSLIH 521
Query: 619 AFIMA 623
AFI
Sbjct: 522 AFIFC 526
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 95/368 (25%), Positives = 153/368 (41%), Gaps = 79/368 (21%)
Query: 34 EESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDK 93
E+ +++R++C + ++G VIGK G I +++ ET A VKV+DP + +R++ I + +
Sbjct: 154 EQEIVFRMICLNDMVGGVIGKGGSTIRALQSETGASVKVIDPVADSDERIIVISA----R 209
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
E+ E+ +QDALL+V++ I+ A + + + R +LVP+
Sbjct: 210 ENSEMMRS--------PSQDALLRVYSKISEASMDKSSSVPAR-------LLVPAQHIGC 254
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISA 213
++GK G+ I +R T SI++ +E CA D V ++G ++++ AL I+
Sbjct: 255 LLGKGGSIIAEMRKLTGASIRIF---GNEQIPRCAQRNDELVQVTGSFQSIQDALLHITG 311
Query: 214 ------IMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSI 267
I K P +P V P + P + GG+ P P+ P R P +
Sbjct: 312 RIRDLIIPPKPHPSGGMPPYPPVGN-PSHHQSRQEAPSHHSGGMPPY--PMHPFRPNPPM 368
Query: 268 ---------------------LGAARVPDLQGYADTG----------NTW----PVYSTG 292
+GA R+P G G TW P
Sbjct: 369 GPFDVADPRPPGPPPSHPMEHMGADRMPYPYGCEQGGPRPFVEQPSPRTWAPEAPATDAP 428
Query: 293 LSL------VSGLVGASQSEELV-------IRVLCPFNKIGRVIGKGGGTIKSIRQASGA 339
S+ V G SE V V+ P IG V G G + I++ SGA
Sbjct: 429 RSMPDTVPAVDFRKGPVSSENQVATPATTTTEVVIPCKYIGFVCGTNGSDLDEIKKISGA 488
Query: 340 QIDVDDTK 347
I V D K
Sbjct: 489 AITVHDPK 496
>gi|294464716|gb|ADE77865.1| unknown [Picea sitchensis]
Length = 348
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 124/344 (36%), Positives = 182/344 (52%), Gaps = 53/344 (15%)
Query: 306 EELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDD 365
EELV R+LCP KIG VIG+ G IKS++ GA+I + D DE +I ++A E +D
Sbjct: 20 EELVFRILCPNKKIGSVIGRAGSIIKSLQDDIGAKIKITDAVPGSDERIIIISANEVLED 79
Query: 366 IKSMAVEAVLLLQTKIND---EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADV 422
S A EA+L +Q++I D + D +T +LL+ S GC++GK G+II+E+RK+T+A++
Sbjct: 80 NLSPAQEALLHIQSQIVDLGPDKDGVITTKLLIPSNQTGCLLGKGGAIISEMRKQTRANI 139
Query: 423 RI-SKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGS---------- 471
RI + D P CA +DE+V++VG++ + R ALVQ+ RLR ++ S
Sbjct: 140 RILPREDLPPCALDSDEMVQIVGDIRAARAALVQVTSRLRSFIHREIGISGPFLSSSSAP 199
Query: 472 ------RNPPVGADHIYSSGTGI-----SMPPLLPS--IPPVGPLGYDQRADSGSGIGML 518
R P YS G G S+P PS I YD+RA G
Sbjct: 200 DPSSKRRLEPSSPGRSYSPGLGFQAGSRSLPDAWPSKEISGRNLPEYDERATKQGG---- 255
Query: 519 SSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLAN 578
P GS S + GL T+EV++P +A+ +I +G +A
Sbjct: 256 ----------------PKGSGISTA-----GLVTKTTVEVVIPEHAIAPLIANSGKGVAQ 294
Query: 579 IRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFIM 622
I +ISGA + + + + D+V ISGTPEQ AA+ L+QAFI+
Sbjct: 295 IAQISGAKVNLLEVRPG-SDKVIEISGTPEQTHAAQGLLQAFIL 337
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 159/328 (48%), Gaps = 39/328 (11%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKE 94
E +++RILCP+ IGSVIG++G +I S++ + A++K+ D PG+ +R++ I ++
Sbjct: 20 EELVFRILCPNKKIGSVIGRAGSIIKSLQDDIGAKIKITDAVPGSDERIIIISAN----- 74
Query: 95 DVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANI 154
+V D+ L AQ+ALL + + I + D D K +L+PS+Q+ +
Sbjct: 75 EVLEDN-------LSPAQEALLHIQSQIVDL---GPDKDGVITTK----LLIPSNQTGCL 120
Query: 155 IGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAI 214
+GK GA I +R +TR +I++ P++ P CA++ D V I G+ A + AL +++
Sbjct: 121 LGKGGAIISEMRKQTRANIRILPREDLPP---CALDSDEMVQIVGDIRAARAALVQVTSR 177
Query: 215 MYKFSPREDIPLETTVREAPPSIIIPSDVPIYP--PGGLY-PNADPILPSRSVPSILGAA 271
+ F RE I + + + S + P PG Y P SRS+P +
Sbjct: 178 LRSFIHRE-IGISGPFLSSSSAPDPSSKRRLEPSSPGRSYSPGLGFQAGSRSLPDAWPSK 236
Query: 272 RVPDLQGYADTGNTWPVY-----STGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKG 326
+ +G P Y G SG+ A + + V+ P + I +I
Sbjct: 237 EI--------SGRNLPEYDERATKQGGPKGSGISTAGLVTKTTVEVVIPEHAIAPLIANS 288
Query: 327 GGTIKSIRQASGAQIDVDDTKDNRDECV 354
G + I Q SGA++++ + + D+ +
Sbjct: 289 GKGVAQIAQISGAKVNLLEVRPGSDKVI 316
>gi|224141139|ref|XP_002323932.1| predicted protein [Populus trichocarpa]
gi|222866934|gb|EEF04065.1| predicted protein [Populus trichocarpa]
Length = 722
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 137/455 (30%), Positives = 223/455 (49%), Gaps = 46/455 (10%)
Query: 37 VIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDV 96
V +R+LC IG VIGK+G +I ++Q+T A+V++ D + DRV+T+ + +
Sbjct: 36 VSFRLLCHASRIGGVIGKAGNIIKGLQQQTGAKVRIEDAPSDSPDRVITVIGPIT--QSA 93
Query: 97 EVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIG 156
V + Q+AL++V I A ++D C++L S +IG
Sbjct: 94 VVFSRIESAVEVSKGQEALVRVFERILEV---AAESDSVADGVVSCRMLAEVSSVGAVIG 150
Query: 157 KAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMY 216
K G ++++R IKV + CA + + I G+ AVKK L A+S +
Sbjct: 151 KGGKVVEKIRKDCGCRIKVLVDKLPD----CAASNEEMIEIEGDVSAVKKGLVAVSRCLQ 206
Query: 217 KFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILP-----SRSVPSI---- 267
P + + + S + SDV + ++P +LP S +P+I
Sbjct: 207 DCQPVDKTRVTNSKPAEAVSRVSLSDVRVE----IHPRHSAVLPTIAQNSSVLPTIPQHS 262
Query: 268 LGAARVPDLQ-GYADTGNTWPVYSTGLSLVSGLVGASQS---EELVIRVLCPFNKIGRVI 323
LG +P YA + LSL S V + ++LV R+LC ++IG VI
Sbjct: 263 LGLPTIPKSSINYASRVHP-------LSLESDRVVTPDTNIPQQLVFRILCTTDRIGGVI 315
Query: 324 GKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKIND 383
GKGG +++++ +GA I V T DE +ITVTA E+P+ S A + ++L+ ++ +
Sbjct: 316 GKGGNIVRALQNETGAAISVGPTVSECDERLITVTASENPESRYSAAQKTIVLVFSRAVE 375
Query: 384 EDDDT-----------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDK--P 430
+ VT RL+VS +GC++GK G+II+E+RK T +RI GD+ P
Sbjct: 376 SGIEKGLDPGSSRGSPVTARLVVSPSQVGCLLGKGGTIISEMRKATSTSIRIIVGDQRNP 435
Query: 431 KCADANDELVEVVGEVGSVRDALVQIILRLRDDAL 465
KC D +VE+ G+ +V+DA+ + RLRD+
Sbjct: 436 KCVPETDHVVEISGDFVNVKDAIYHVTGRLRDNLF 470
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 157/341 (46%), Gaps = 44/341 (12%)
Query: 305 SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITV------- 357
S + R+LC ++IG VIGK G IK ++Q +GA++ ++D + + VITV
Sbjct: 33 SGHVSFRLLCHASRIGGVIGKAGNIIKGLQQQTGAKVRIEDAPSDSPDRVITVIGPITQS 92
Query: 358 ----TAIESPDDIKS------MAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKS 407
+ IES ++ E +L + + + D V+ R+L +G +IGK
Sbjct: 93 AVVFSRIESAVEVSKGQEALVRVFERILEVAAESDSVADGVVSCRMLAEVSSVGAVIGKG 152
Query: 408 GSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKD 467
G ++ +IRK +++ P CA +N+E++E+ G+V +V+ LV + L+D D
Sbjct: 153 GKVVEKIRKDCGCRIKVLVDKLPDCAASNEEMIEIEGDVSAVKKGLVAVSRCLQDCQPVD 212
Query: 468 RDGSRN--PPVGADHIYSSGTGISMPP----LLPSIPPVGPLGYDQRADSGSGIGMLSSS 521
+ N P + S + + P +LP+I A + S + +
Sbjct: 213 KTRVTNSKPAEAVSRVSLSDVRVEIHPRHSAVLPTI-----------AQNSSVLPTIPQH 261
Query: 522 SLYGYGSLSMGDSPYGS----MSSYSSKLY---GGLPPPLTLEVLVPANAVGKVIGKAGS 574
SL G ++ Y S +S S ++ +P L +L + +G VIGK G+
Sbjct: 262 SL-GLPTIPKSSINYASRVHPLSLESDRVVTPDTNIPQQLVFRILCTTDRIGGVIGKGGN 320
Query: 575 NLANIRKISGATIEMSDSKSSRGDRVALISGT--PEQKRAA 613
+ ++ +GA I + + S +R+ ++ + PE + +A
Sbjct: 321 IVRALQNETGAAISVGPTVSECDERLITVTASENPESRYSA 361
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 52/68 (76%)
Query: 555 TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAE 614
T+E++VP NA G V G+ GSNLA +R+ISGA + + + + DR+ +ISGTP++ +AA+
Sbjct: 651 TVEIVVPENAFGSVYGENGSNLARLRQISGAKVIVHEPRLGTSDRIVVISGTPDETQAAQ 710
Query: 615 NLIQAFIM 622
+L+QAFI+
Sbjct: 711 SLLQAFIL 718
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 85/179 (47%), Gaps = 15/179 (8%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKE 94
+ +++RILC IG VIGK G ++ +++ ET A + V +R++T+ +
Sbjct: 298 QQLVFRILCTTDRIGGVIGKGGNIVRALQNETGAAISVGPTVSECDERLITVTA------ 351
Query: 95 DVEVDDEFNDKEPLCAAQDALLKVHA-AIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
N + AAQ ++ V + A+ + + D R +++V SQ
Sbjct: 352 ------SENPESRYSAAQKTIVLVFSRAVESGIEKGLDPGSSRGSPVTARLVVSPSQVGC 405
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAIS 212
++GK G I +R T TSI++ D P C E D+ V ISG+ VK A++ ++
Sbjct: 406 LLGKGGTIISEMRKATSTSIRIIVGDQRNP--KCVPETDHVVEISGDFVNVKDAIYHVT 462
Score = 38.9 bits (89), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 56/119 (47%), Gaps = 9/119 (7%)
Query: 265 PSILGAARVPDL--QGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRV 322
P + + +P + +G +D P GL L SG A + V ++ P N G V
Sbjct: 606 PRLWASQTIPRVNPRGISDVSRRLPSLKAGLELGSGGKSAFVTNTTV-EIVVPENAFGSV 664
Query: 323 IGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKI 381
G+ G + +RQ SGA++ V + + + ++ ++ +PD+ ++ A LLQ I
Sbjct: 665 YGENGSNLARLRQISGAKVIVHEPRLGTSDRIVVISG--TPDETQA----AQSLLQAFI 717
>gi|414589867|tpg|DAA40438.1| TPA: hypothetical protein ZEAMMB73_485730 [Zea mays]
Length = 640
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 157/557 (28%), Positives = 246/557 (44%), Gaps = 96/557 (17%)
Query: 121 AIANAVANATDNDKKRKEKEE---------CQILVPSSQSANIIGKAGATIKRLRSKTRT 171
A + V + + D+ +EE C++L Q ++GK G T++R+R +
Sbjct: 81 AWEHVVGHRVEGDEAMGGEEEEREVTGAVGCRMLAAGWQVGCVLGKGGKTVERMRQECGA 140
Query: 172 SIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVR 231
I+V P A D + ISG V+KAL A+S + + +PR D
Sbjct: 141 QIRVFRNREQLP--PWAPPGDELIHISGSFSQVRKALLAVSTCL-QDNPRPD-------- 189
Query: 232 EAPPSIIIPSDVPIYPPG---GLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTWPV 288
+ IP P PG G P DP +P +PD N P
Sbjct: 190 ----THNIPIGRPFGLPGSGTGCPPGMDPHSQRSYLP-----PHIPDYHTRNYPSNAGP- 239
Query: 289 YSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD 348
G +E+V R++ +G +IGKGG TI++++ +GA I + +
Sbjct: 240 --PGPRFFF-------EQEIVFRMIILNEMVGSIIGKGGSTIRALQSETGACIKILEPVA 290
Query: 349 NRDECVITVTAIESPDDIKSMAVEAVLLLQTKINDEDDD---TVTIRLLVSSKVIGCIIG 405
+ DE V+ +TA E+ D + S A +AV+ + ++I++ D RLLV S+ IGC++G
Sbjct: 291 DSDERVVAITARENSDMLHSPAQDAVVRVYSRISEASIDRSSHTPARLLVPSQHIGCLLG 350
Query: 406 KSGSIINEIRKRTKADVRISKGDK-PKCADANDELVEVVGEVGSVRDALVQIILRLRDDA 464
K GSII+E+RK T A++RI ++ P+CA NDE+V+V G S++DAL+ I R+RD
Sbjct: 351 KGGSIISEMRKITGANIRIFGNEQIPRCAQRNDEMVQVTGSFQSIQDALLHITGRIRDVI 410
Query: 465 LKDRDGSRN----PPVGADHIYSSGTGISMPPLLPS--IPPV--------GPLGY----D 506
L S PPVG ++ S P L PS +PP P+G+ D
Sbjct: 411 LPKPHPSGGMPPYPPVGNIPVHQSRQEQPPPHLHPSGGMPPYPMHPFRPDAPMGHFEMGD 470
Query: 507 QRADSGSGIGMLSSSSL-YGYGSLSMGDSPY--------------GSMSSYSSKLYGGLP 551
R + + + + Y YG G P+ + S + +P
Sbjct: 471 HRPPPVHSMEYMGADRMPYLYGVEQGGPRPFLEQPSPRTCPPEAPRTNSEVPRNMSDAVP 530
Query: 552 -----------------PPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS 594
P T EV++P N +G V G GS + I K+SGA+I + D K+
Sbjct: 531 ATDFRKGPVAIENQVATPTGTTEVIIPCNYIGFVCGNNGSEIEEIEKMSGASITVHDPKA 590
Query: 595 SRGDRVALISGTPEQKR 611
+ +I G P + +
Sbjct: 591 GDANSKVVICGDPRRNK 607
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 93/365 (25%), Positives = 156/365 (42%), Gaps = 73/365 (20%)
Query: 34 EESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDK 93
E+ +++R++ + ++GS+IGK G I +++ ET A +K+++P + +RVV I +
Sbjct: 247 EQEIVFRMIILNEMVGSIIGKGGSTIRALQSETGACIKILEPVADSDERVVAITAR---- 302
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
E D + AQDA+++V++ I+ A + + + R +LVPS
Sbjct: 303 ---ENSDMLHS-----PAQDAVVRVYSRISEASIDRSSHTPAR-------LLVPSQHIGC 347
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAI-- 211
++GK G+ I +R T +I++ +E CA D V ++G ++++ AL I
Sbjct: 348 LLGKGGSIISEMRKITGANIRIF---GNEQIPRCAQRNDEMVQVTGSFQSIQDALLHITG 404
Query: 212 ------------SAIMYKFSPREDIPLETTVREAPPSIIIPS-DVPIYP--------PGG 250
S M + P +IP+ + +E PP + PS +P YP P G
Sbjct: 405 RIRDVILPKPHPSGGMPPYPPVGNIPVHQSRQEQPPPHLHPSGGMPPYPMHPFRPDAPMG 464
Query: 251 LYPNADPILPSRSVPSILGAARVPDLQGYADTG----------NTWPVYS--TGLSLVSG 298
+ D P +GA R+P L G G T P + T +
Sbjct: 465 HFEMGDHRPPPVHSMEYMGADRMPYLYGVEQGGPRPFLEQPSPRTCPPEAPRTNSEVPRN 524
Query: 299 LVGASQSEEL----------------VIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQID 342
+ A + + V+ P N IG V G G I+ I + SGA I
Sbjct: 525 MSDAVPATDFRKGPVAIENQVATPTGTTEVIIPCNYIGFVCGNNGSEIEEIEKMSGASIT 584
Query: 343 VDDTK 347
V D K
Sbjct: 585 VHDPK 589
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 66/307 (21%), Positives = 128/307 (41%), Gaps = 54/307 (17%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSM 369
+R+LCP +++ ++R + +D D E V+ ++ ++P
Sbjct: 36 LRLLCPSSRVA-----------TLRPSRDLHVDHPPVGD---EAVLVISGPDTPA-AAVR 80
Query: 370 AVEAVLLLQTKIND-----EDDDTVT----IRLLVSSKVIGCIIGKSGSIINEIRKRTKA 420
A E V+ + + ++ E++ VT R+L + +GC++GK G + +R+ A
Sbjct: 81 AWEHVVGHRVEGDEAMGGEEEEREVTGAVGCRMLAAGWQVGCVLGKGGKTVERMRQECGA 140
Query: 421 DVRISKGDK--PKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGA 478
+R+ + + P A DEL+ + G VR AL+ + L+D+ D + N P+G
Sbjct: 141 QIRVFRNREQLPPWAPPGDELIHISGSFSQVRKALLAVSTCLQDNPRPD---THNIPIGR 197
Query: 479 DH-IYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYG 537
+ SGTG P G D + + Y S + P G
Sbjct: 198 PFGLPGSGTGC-------------PPGMDPHSQRSYLPPHIPDYHTRNYPSNA---GPPG 241
Query: 538 SMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRG 597
+ + + +++ VG +IGK GS + ++ +GA I++ + +
Sbjct: 242 PRFFFEQE--------IVFRMIILNEMVGSIIGKGGSTIRALQSETGACIKILEPVADSD 293
Query: 598 DRVALIS 604
+RV I+
Sbjct: 294 ERVVAIT 300
>gi|222618061|gb|EEE54193.1| hypothetical protein OsJ_01028 [Oryza sativa Japonica Group]
Length = 748
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 165/548 (30%), Positives = 262/548 (47%), Gaps = 58/548 (10%)
Query: 97 EVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIG 156
E E PL A + LL N + N T + + ++LV SQ ++G
Sbjct: 233 EAQLELEKGMPL-AVKAILLVFDRIFVNEMENGTGDASGERNHVSLRLLVLDSQVGWLLG 291
Query: 157 KAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMY 216
K G+ IK++ + + I+V+ KD CA+ D I+GE ++V+K L ++ +++
Sbjct: 292 KNGSVIKQMSTDSCCEIRVS-KDK---LPLCALPRDELCQITGELDSVRKGLNTVAQLLF 347
Query: 217 KFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDL 276
P+E L + S DV PP G+ PN LP + P++ P+
Sbjct: 348 THPPKESDVLGAHNSGSSRSFFNQPDV--LPP-GMQPNLH--LPFQG-PNVAHLPNFPE- 400
Query: 277 QGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQA 336
+L+ G G+ E L R+LC +K+G +IGKGG IKSI+
Sbjct: 401 -----------------ALMHGH-GSVPPEPLTFRLLCSSDKVGGIIGKGGNNIKSIQND 442
Query: 337 SGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKI---NDEDDDTVTIRL 393
+G +I V DT ++ ++ ++ P D S A A+L +Q KI ++ + RL
Sbjct: 443 TGCEIKVLDTVPKSEDRIVFISGPAHPGDGISPAQNAILHVQRKIVPTSNTKEGPAICRL 502
Query: 394 LVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDK-PKCADANDELVEVVGEVGSVRDA 452
+VS +GC++GK GSII E+RK + A + + DK PK NDE+V++ G ++++A
Sbjct: 503 IVSPNQVGCLLGKGGSIIAEMRKLSGAHIIVLSKDKIPKGVPENDEVVQISGASEAIQEA 562
Query: 453 LVQIILRLRDDALKDRDGSR----NPPVG-ADHIYSSGTG----ISMPPLLPSIPPVGPL 503
L+QI RLR+ +DR S PP G D + S G IS P + P++P
Sbjct: 563 LMQITARLRNHLFRDRMASTVPNVQPPFGLVDPQFGSYAGNHDSIS-PRIFPNVPQFHKD 621
Query: 504 GYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPP--------LT 555
+ D S + + G +S+ D P + + GG P P +T
Sbjct: 622 FIGRPLDEMSAPWTMKGMQVVG-DPISLPDIP-----GMAHRGMGGFPGPGQPSIVSTIT 675
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAEN 615
+V+VP + + G+ G L IR+ SGA I ++D + D LISGTP+Q AA +
Sbjct: 676 ADVMVPKLVLPSLCGEDGGCLNRIREFSGAKITVADPMGNAMDTAILISGTPDQMHAARS 735
Query: 616 LIQAFIMA 623
LIQAF+++
Sbjct: 736 LIQAFVLS 743
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 95/357 (26%), Positives = 149/357 (41%), Gaps = 59/357 (16%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIY--SHVKD 92
E + +R+LC +G +IGK G I SI+ +T +KV+D P ++DR+V I +H D
Sbjct: 412 EPLTFRLLCSSDKVGGIIGKGGNNIKSIQNDTGCEIKVLDTVPKSEDRIVFISGPAHPGD 471
Query: 93 KEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSA 152
+ AQ+A+L V I T N K+ C+++V +Q
Sbjct: 472 G--------------ISPAQNAILHVQRKIV-----PTSNTKEGPAI--CRLIVSPNQVG 510
Query: 153 NIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAIS 212
++GK G+ I +R + I V KD E D V ISG SEA+++AL I+
Sbjct: 511 CLLGKGGSIIAEMRKLSGAHIIVLSKDK---IPKGVPENDEVVQISGASEAIQEALMQIT 567
Query: 213 AIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGG------LYPNADPI-------- 258
A + R+ + T PP ++ Y ++PN
Sbjct: 568 ARLRNHLFRDRM-ASTVPNVQPPFGLVDPQFGSYAGNHDSISPRIFPNVPQFHKDFIGRP 626
Query: 259 LPSRSVPSILGAARV-------PDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIR 311
L S P + +V PD+ G A G S+VS + +LV+
Sbjct: 627 LDEMSAPWTMKGMQVVGDPISLPDIPGMAHRGMGGFPGPGQPSIVSTITADVMVPKLVLP 686
Query: 312 VLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKS 368
LC G+ GG + IR+ SGA+I V D N + I ++ +PD + +
Sbjct: 687 SLC---------GEDGGCLNRIREFSGAKITVADPMGNAMDTAILISG--TPDQMHA 732
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 44/73 (60%)
Query: 38 IYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVE 97
I+RILCP G+VIGK G +I IRQET +++V + PG +RV+ I + KD+E
Sbjct: 89 IFRILCPTSKSGNVIGKGGGIIAKIRQETGVKIRVDEVVPGCDERVIVITAIDKDREVSH 148
Query: 98 VDDEFNDKEPLCA 110
V + ND C+
Sbjct: 149 VQTKENDGGVACS 161
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 44/75 (58%), Gaps = 8/75 (10%)
Query: 309 VIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKS 368
+ R+LCP +K G VIGKGGG I IRQ +G +I VD+ DE VI +TAI+ ++
Sbjct: 89 IFRILCPTSKSGNVIGKGGGIIAKIRQETGVKIRVDEVVPGCDERVIVITAIDKDREVSH 148
Query: 369 MAVEAVLLLQTKIND 383
+QTK ND
Sbjct: 149 --------VQTKEND 155
>gi|255563372|ref|XP_002522689.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223538165|gb|EEF39776.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 698
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 132/451 (29%), Positives = 223/451 (49%), Gaps = 77/451 (17%)
Query: 37 VIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDV 96
V +R+LC IG +IGKSG +I ++Q++ A++++ + + DRV+T+ + + V
Sbjct: 56 VSFRLLCHASRIGGIIGKSGTIIKQLQQQSGAKIRIEESPAESSDRVITVIAEGQIVSKV 115
Query: 97 EVDDEFNDKEPLCAAQDALLKVHAAIANAVA--NATDNDKKRKEKEECQILVPSSQSANI 154
V+ E D + AQ+ L++V I A + + C++L S Q+ ++
Sbjct: 116 RVESEEVD---VSRAQEGLIRVFERILEVAAESDGINVVAGGGGVVSCRMLAGSKQAGSV 172
Query: 155 IGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAI 214
IGK G ++++R I+V ++ CA + + I G+ +VKKAL A+S
Sbjct: 173 IGKGGKVVEKIRKDCGVKIRVL----TDKLPVCAGPNEEMIEIEGDILSVKKALIAVSRC 228
Query: 215 M----------------YKFSPREDIPLETTVREAPP-SIIIPSDVPIYPPGGLYPNADP 257
+ ++ P+E +P E V AP +I++P+ + NA
Sbjct: 229 LQDCQPVDKPRVGSSKYFEAVPQEPLP-EMRVEIAPQRNIMVPT---------MQNNAVS 278
Query: 258 ILPSRSVPS--ILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCP 315
P VP +L RVP L + L +E+V ++LCP
Sbjct: 279 CAP---VPHNFLLETDRVPSLD---------------MKLFQ--------QEVVFKILCP 312
Query: 316 FNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVL 375
+ +G VIGKGG IK+++ +GA I + T DE +ITV A E+P+ S A +AV+
Sbjct: 313 NDMVGGVIGKGGTIIKALQNETGASITIGATIAESDERLITVIASENPESRYSAAQKAVV 372
Query: 376 LLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDK-PKCAD 434
L V RL+V S +GC++GK G II+++RK T ++I GD+ PKC
Sbjct: 373 L------------VFSRLVVPSNQVGCLLGKGGIIISDMRKTTGTSIKILAGDQLPKCVP 420
Query: 435 ANDELVEVVGEVGSVRDALVQIILRLRDDAL 465
N+++V++ G+ +V+DA+ + RLRD+
Sbjct: 421 ENEQVVQISGDFMNVKDAVYHVTGRLRDNLF 451
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 152/327 (46%), Gaps = 41/327 (12%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTA---------I 360
R+LC ++IG +IGK G IK ++Q SGA+I ++++ + VITV A +
Sbjct: 58 FRLLCHASRIGGIIGKSGTIIKQLQQQSGAKIRIEESPAESSDRVITVIAEGQIVSKVRV 117
Query: 361 ESPDDIKSMAVEAVLLLQTKIND---EDD---------DTVTIRLLVSSKVIGCIIGKSG 408
ES + S A E ++ + +I + E D V+ R+L SK G +IGK G
Sbjct: 118 ESEEVDVSRAQEGLIRVFERILEVAAESDGINVVAGGGGVVSCRMLAGSKQAGSVIGKGG 177
Query: 409 SIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDR 468
++ +IRK +R+ P CA N+E++E+ G++ SV+ AL+ + L+D D+
Sbjct: 178 KVVEKIRKDCGVKIRVLTDKLPVCAGPNEEMIEIEGDILSVKKALIAVSRCLQDCQPVDK 237
Query: 469 DGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGS 528
P VG+ + + +P + I P + ++ + + L
Sbjct: 238 -----PRVGSSKYFEAVPQEPLPEMRVEIAPQRNIMVPTMQNNAVSCAPVPHNFL----- 287
Query: 529 LSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIE 588
L P M + + + ++L P + VG VIGK G+ + ++ +GA+I
Sbjct: 288 LETDRVPSLDMKLFQQE--------VVFKILCPNDMVGGVIGKGGTIIKALQNETGASIT 339
Query: 589 MSDSKSSRGDRVALI--SGTPEQKRAA 613
+ + + +R+ + S PE + +A
Sbjct: 340 IGATIAESDERLITVIASENPESRYSA 366
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 90/189 (47%), Gaps = 37/189 (19%)
Query: 24 RINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRV 83
R+ D K ++ V+++ILCP+ ++G VIGK G +I +++ ET A + + + +R+
Sbjct: 292 RVPSLDMKLFQQEVVFKILCPNDMVGGVIGKGGTIIKALQNETGASITIGATIAESDERL 351
Query: 84 VTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQ 143
+T+ + N + AAQ A++ V + +
Sbjct: 352 ITVIA------------SENPESRYSAAQKAVVLVFS----------------------R 377
Query: 144 ILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEA 203
++VPS+Q ++GK G I +R T TSIK+ A + C E + V ISG+
Sbjct: 378 LVVPSNQVGCLLGKGGIIISDMRKTTGTSIKIL---AGDQLPKCVPENEQVVQISGDFMN 434
Query: 204 VKKALFAIS 212
VK A++ ++
Sbjct: 435 VKDAVYHVT 443
>gi|357445989|ref|XP_003593272.1| Heterogeneous nuclear ribonucleoprotein K [Medicago truncatula]
gi|355482320|gb|AES63523.1| Heterogeneous nuclear ribonucleoprotein K [Medicago truncatula]
Length = 766
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 162/548 (29%), Positives = 259/548 (47%), Gaps = 79/548 (14%)
Query: 37 VIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDV 96
V +R+LC IG VIGKSG VI +++ T A++++ D + DRV+ + V
Sbjct: 48 VAFRLLCNSSRIGGVIGKSGTVIKNLQLTTGAKIRIEDSPNESPDRVIMVIGASNIDGKV 107
Query: 97 EVDDEFNDKEPL--CAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANI 154
V D E + AQ+ALL+V I VA + + C+++ S+Q+ ++
Sbjct: 108 MVRSHSGDGEAIEVSKAQEALLRVFDRILE-VAAEMEGIELGDRTVSCRLVADSAQAGSV 166
Query: 155 IGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAIS-- 212
IGK G +++++ T I V + +C D + I G +VKKAL A+S
Sbjct: 167 IGKGGKVVEKIKKDTGCKIWVCKDNLP----ACISSPDEVIEIEGSVSSVKKALVAVSRN 222
Query: 213 ------AIMYKFS----------------PRE---DIPLETTVREAPPSIIIPSDVPIYP 247
A K + PRE +P ET + AP + + VP
Sbjct: 223 LQDRHHADRTKMTGQNSHEVIHHEALVGVPRETLMSVPRETFI-GAPRETL--TAVPCET 279
Query: 248 PGGLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEE 307
L+ D +L RS SIL ++ YA ++ S ++ VS L + +E
Sbjct: 280 LTDLH--VDHLLQRRSALSILPSSS----NSYATGVHS---LSAEVNRVSSLEPKAHQQE 330
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
+ +++C ++IG VIGKGG I++++ +GA + V + ++ +IT+TA ESP+
Sbjct: 331 ITFKIICSNDRIGGVIGKGGNIIRALQSETGATVSVGPSVAECEDRLITITASESPESRY 390
Query: 368 SMAVEAVLLLQTKIND-----------EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
S A +A +L+ ++ + +VT +L+VSS +GC++GK G I++E+RK
Sbjct: 391 SPAQKATVLVFSRSVEAGIEKGIDSGLNTGSSVTAQLVVSSNQVGCLLGKGGVIVSEMRK 450
Query: 417 RTKADVRISKGDK-PKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPP 475
T A +RI DK KCA ND++V++ GE +V+DAL RLRD+
Sbjct: 451 ATGASIRIVGTDKVSKCASDNDQVVQISGEFSNVQDALYNATGRLRDNLF---------- 500
Query: 476 VGADHIYSSGTGISMPPLLPSIPPVG-----PLGYDQ--RADSGSGIGMLSSSSLYGYGS 528
+ S+GT S+ + P G PLG RAD+ + + L L G S
Sbjct: 501 --GGTLKSAGTR-SLSSVQSDTSPYGRLRDVPLGSQSSLRADTNAFV-RLRDVPLVGQSS 556
Query: 529 LSMGDSPY 536
L SPY
Sbjct: 557 LQADTSPY 564
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 95/347 (27%), Positives = 163/347 (46%), Gaps = 47/347 (13%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDD- 365
+ R+LC ++IG VIGK G IK+++ +GA+I ++D+ + + VI V + D
Sbjct: 47 HVAFRLLCNSSRIGGVIGKSGTVIKNLQLTTGAKIRIEDSPNESPDRVIMVIGASNIDGK 106
Query: 366 --IKSM-----------AVEAVL-----LLQTKINDED----DDTVTIRLLVSSKVIGCI 403
++S A EA+L +L+ E D TV+ RL+ S G +
Sbjct: 107 VMVRSHSGDGEAIEVSKAQEALLRVFDRILEVAAEMEGIELGDRTVSCRLVADSAQAGSV 166
Query: 404 IGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDD 463
IGK G ++ +I+K T + + K + P C + DE++E+ G V SV+ ALV + L+D
Sbjct: 167 IGKGGKVVEKIKKDTGCKIWVCKDNLPACISSPDEVIEIEGSVSSVKKALVAVSRNLQDR 226
Query: 464 ALKDRD--GSRNPPVGADHIYSSG----TGISMP---------PLLPSIP--PVGPLGYD 506
DR +N H G T +S+P L ++P + L D
Sbjct: 227 HHADRTKMTGQNSHEVIHHEALVGVPRETLMSVPRETFIGAPRETLTAVPCETLTDLHVD 286
Query: 507 QRADSGSGIGML-SSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAV 565
S + +L SSS+ Y G S+ + +SS K + +T +++ + +
Sbjct: 287 HLLQRRSALSILPSSSNSYATGVHSL-SAEVNRVSSLEPKAH---QQEITFKIICSNDRI 342
Query: 566 GKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISG--TPEQK 610
G VIGK G+ + ++ +GAT+ + S + DR+ I+ +PE +
Sbjct: 343 GGVIGKGGNIIRALQSETGATVSVGPSVAECEDRLITITASESPESR 389
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 114/267 (42%), Gaps = 40/267 (14%)
Query: 24 RINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRV 83
R++ + K +++ + ++I+C + IG VIGK G +I +++ ET A V V +DR+
Sbjct: 318 RVSSLEPKAHQQEITFKIICSNDRIGGVIGKGGNIIRALQSETGATVSVGPSVAECEDRL 377
Query: 84 VTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQ 143
+TI + E + A + +L ++ + D+ Q
Sbjct: 378 ITITA-----------SESPESRYSPAQKATVLVFSRSVEAGIEKGIDSGLNTGSSVTAQ 426
Query: 144 ILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEA 203
++V S+Q ++GK G + +R T SI++ D CA + D V ISGE
Sbjct: 427 LVVSSNQVGCLLGKGGVIVSEMRKATGASIRIVGTDK---VSKCASDNDQVVQISGEFSN 483
Query: 204 VKKALF---------------------AISAIMYKFSPR---EDIPL--ETTVREAPPSI 237
V+ AL+ ++S++ SP D+PL ++++R +
Sbjct: 484 VQDALYNATGRLRDNLFGGTLKSAGTRSLSSVQSDTSPYGRLRDVPLGSQSSLRADTNAF 543
Query: 238 IIPSDVPIYPPGGLYPNADPILPSRSV 264
+ DVP+ L + P + R V
Sbjct: 544 VRLRDVPLVGQSSLQADTSPYVRLRDV 570
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 68/112 (60%), Gaps = 5/112 (4%)
Query: 516 GMLSSSSLYGYGSLSMGDSPYGSMSSYSS-KLYGGLPPPL----TLEVLVPANAVGKVIG 570
G+ + + G S S+ ++ +GS S +L G + T+E++VP + + V G
Sbjct: 651 GLWTPPRVTGMNSGSINEASWGSTSRKGGLELVSGSKSAIVTNTTIEIVVPEDTLYLVYG 710
Query: 571 KAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFIM 622
+ GSNLA +R+ISGA + + + + DR ++SG+P++ +AA++L+QAFI+
Sbjct: 711 ENGSNLARLRQISGAKVVIHEPRPGTSDRTIVLSGSPDETQAAQSLLQAFIL 762
>gi|296088778|emb|CBI38228.3| unnamed protein product [Vitis vinifera]
Length = 585
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 139/468 (29%), Positives = 227/468 (48%), Gaps = 73/468 (15%)
Query: 194 FVLISGESEAVKKALFAISAIMYKFSPREDIPL--ETTVREAPPSIIIPSDVPIYPPGGL 251
++I G+ AVKKAL A+S + +D P +T + P ++P P L
Sbjct: 139 MIIIEGDVLAVKKALVAVSRRL------QDCPNVDKTKLIGGRPLEVVPQQSLPDPRVDL 192
Query: 252 YPNADPILPSRSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIR 311
+ +LP +PS + YA + P+ S +S L + +E++ +
Sbjct: 193 FQQRGSVLPP--IPS--------NTISYAS--GSRPL-SINTERISTLDPKTSQQEVIFK 239
Query: 312 VLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAV 371
+LC +++G VIGKGG +K+++ +GA I V DE +IT+TA E+P+ S A
Sbjct: 240 ILCSNDRVGGVIGKGGTIVKALQNEAGASISVGAPVAECDERLITITASENPESRYSPAQ 299
Query: 372 EAVLLLQTKI----------NDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKAD 421
V+L+ + + V+ RL+V S +GC++GK G+II+E+RK + A
Sbjct: 300 NGVILVFNRSIEAGIEKGLDSGSKGSPVSARLVVPSNQVGCLMGKGGTIISEMRKASGAG 359
Query: 422 VRISKGDK-PKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADH 480
+RI D+ PKCA ND++V++ GE +V+D L I RLRD+ +
Sbjct: 360 IRIIGSDQVPKCASENDQVVQISGEFVNVQDGLYHITGRLRDNLFPSKT----------- 408
Query: 481 IYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMG-------- 532
+G GI + I P G + S +G+ S S + + SM
Sbjct: 409 --LNGAGIRSSSAMNEISPYGRVRDPASFGLHSSVGVSPSFSRHTTLTQSMDHLGLSHSL 466
Query: 533 DSPYGSMSSYSSKLYGGLPP-------------------PLTLEVLVPANAVGKVIGKAG 573
D P S + S+ G+ P T+E+++P N +G V G+ G
Sbjct: 467 DHPT-SPRLWPSQTVTGVNPRNIKGGIELGSGSKSAIITNTTVEIVIPENVIGSVYGENG 525
Query: 574 SNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFI 621
+NLA +RKISGA + + + + DR+ +ISGTP++ +AA++L+QAFI
Sbjct: 526 NNLARLRKISGAKVTLHEPRPGTSDRIVIISGTPDETQAAQSLLQAFI 573
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 91/384 (23%), Positives = 167/384 (43%), Gaps = 57/384 (14%)
Query: 24 RINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRV 83
RI+ D K +++ VI++ILC + +G VIGK G ++ +++ E A + V P +R+
Sbjct: 223 RISTLDPKTSQQEVIFKILCSNDRVGGVIGKGGTIVKALQNEAGASISVGAPVAECDERL 282
Query: 84 VTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKV-HAAIANAVANATDNDKKRKEKEEC 142
+TI + N + AQ+ ++ V + +I + D+ K
Sbjct: 283 ITITA------------SENPESRYSPAQNGVILVFNRSIEAGIEKGLDSGSK-GSPVSA 329
Query: 143 QILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESE 202
+++VPS+Q ++GK G I +R + I++ S+ CA E D V ISGE
Sbjct: 330 RLVVPSNQVGCLMGKGGTIISEMRKASGAGIRII---GSDQVPKCASENDQVVQISGEFV 386
Query: 203 AVKKALFAIS---------------AIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYP 247
V+ L+ I+ A + S +I VR+ P S + S V + P
Sbjct: 387 NVQDGLYHITGRLRDNLFPSKTLNGAGIRSSSAMNEISPYGRVRD-PASFGLHSSVGVSP 445
Query: 248 PGGLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTWPVYS-TGL---SLVSGLVGAS 303
+ + + L P L WP + TG+ ++ G+ S
Sbjct: 446 SFSRHTTLTQSMDHLGLSHSLDHPTSPRL---------WPSQTVTGVNPRNIKGGIELGS 496
Query: 304 QSEELVI-----RVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
S+ +I ++ P N IG V G+ G + +R+ SGA++ + + + + ++ ++
Sbjct: 497 GSKSAIITNTTVEIVIPENVIGSVYGENGNNLARLRKISGAKVTLHEPRPGTSDRIVIIS 556
Query: 359 AIESPDDIKSMAVEAVLLLQTKIN 382
+PD+ ++ A LLQ I+
Sbjct: 557 G--TPDETQA----AQSLLQAFIH 574
>gi|147789223|emb|CAN69138.1| hypothetical protein VITISV_022038 [Vitis vinifera]
Length = 569
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 140/470 (29%), Positives = 228/470 (48%), Gaps = 69/470 (14%)
Query: 190 EFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPG 249
++ N + I G+ AVKKAL A+S + P D +T + P ++P P
Sbjct: 119 KWVNVLQIEGDVLAVKKALVAVSRRLQD-CPNVD---KTKLIGGRPLEVVPQQSLPDPRV 174
Query: 250 GLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELV 309
L+ +LP +PS + YA + P+ S +S L + +E++
Sbjct: 175 DLFQQRGSVLPP--IPS--------NTISYAS--GSRPL-SINTERISTLDPKTSQQEVI 221
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSM 369
++LC +++G VIGKGG +K+++ +GA I V DE +IT+TA E+P+ S
Sbjct: 222 FKILCSNDRVGGVIGKGGTIVKALQNEAGASISVGAPVAECDERLITITASENPESRYSP 281
Query: 370 AVEAVLLLQTKI----------NDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
A V+L+ + + V+ RL+V S +GC++GK G+II+E+RK +
Sbjct: 282 AQNGVILVFNRSIEAGIEKGLDSGSKGSPVSARLVVPSNQVGCLMGKGGTIISEMRKASG 341
Query: 420 ADVRISKGDK-PKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGA 478
A +RI D+ PKCA ND++V++ GE +V+D L I RLRD+ +
Sbjct: 342 AGIRIIGSDQVPKCASENDQVVQISGEFVNVQDGLYHITGRLRDNLFPSKT--------- 392
Query: 479 DHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMG------ 532
+G GI + I P G + S +G+ S S + + SM
Sbjct: 393 ----LNGAGIRSSSAMNEISPYGRVRDPASFGLHSSVGVSPSFSRHTTLTQSMDHLGLSH 448
Query: 533 --DSPYGSMSSYSSKLYGGLPP-------------------PLTLEVLVPANAVGKVIGK 571
D P S + S+ G+ P T+E+++P N +G V G+
Sbjct: 449 SLDHPT-SPRLWPSQTVTGVNPRNIKGGIELGSGSKSAIITNTTVEIVIPENVIGSVYGE 507
Query: 572 AGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFI 621
G+NLA +RKISGA + + + + DR+ +ISGTP++ +AA++L+QAFI
Sbjct: 508 NGNNLARLRKISGAKVTLHEPRPGTSDRIVIISGTPDETQAAQSLLQAFI 557
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 91/384 (23%), Positives = 167/384 (43%), Gaps = 57/384 (14%)
Query: 24 RINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRV 83
RI+ D K +++ VI++ILC + +G VIGK G ++ +++ E A + V P +R+
Sbjct: 207 RISTLDPKTSQQEVIFKILCSNDRVGGVIGKGGTIVKALQNEAGASISVGAPVAECDERL 266
Query: 84 VTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKV-HAAIANAVANATDNDKKRKEKEEC 142
+TI + N + AQ+ ++ V + +I + D+ K
Sbjct: 267 ITITA------------SENPESRYSPAQNGVILVFNRSIEAGIEKGLDSGSK-GSPVSA 313
Query: 143 QILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESE 202
+++VPS+Q ++GK G I +R + I++ S+ CA E D V ISGE
Sbjct: 314 RLVVPSNQVGCLMGKGGTIISEMRKASGAGIRII---GSDQVPKCASENDQVVQISGEFV 370
Query: 203 AVKKALFAIS---------------AIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYP 247
V+ L+ I+ A + S +I VR+ P S + S V + P
Sbjct: 371 NVQDGLYHITGRLRDNLFPSKTLNGAGIRSSSAMNEISPYGRVRD-PASFGLHSSVGVSP 429
Query: 248 PGGLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTWPVYS-TGL---SLVSGLVGAS 303
+ + + L P L WP + TG+ ++ G+ S
Sbjct: 430 SFSRHTTLTQSMDHLGLSHSLDHPTSPRL---------WPSQTVTGVNPRNIKGGIELGS 480
Query: 304 QSEELVI-----RVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
S+ +I ++ P N IG V G+ G + +R+ SGA++ + + + + ++ ++
Sbjct: 481 GSKSAIITNTTVEIVIPENVIGSVYGENGNNLARLRKISGAKVTLHEPRPGTSDRIVIIS 540
Query: 359 AIESPDDIKSMAVEAVLLLQTKIN 382
+PD+ ++ A LLQ I+
Sbjct: 541 G--TPDETQA----AQSLLQAFIH 558
>gi|242055819|ref|XP_002457055.1| hypothetical protein SORBIDRAFT_03g000560 [Sorghum bicolor]
gi|241929030|gb|EES02175.1| hypothetical protein SORBIDRAFT_03g000560 [Sorghum bicolor]
Length = 716
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 163/569 (28%), Positives = 260/569 (45%), Gaps = 57/569 (10%)
Query: 80 KDRVVTIYSHVKDKEDVEV-DDEFNDK----EPLCAAQDALLKVHAAIANAVA----NAT 130
KD + H + + D E DD F K EP AL + A N T
Sbjct: 175 KDHIREEKDHSEKEHDKEEKDDPFVAKVAESEPERVIPSALKAISLVFDRIFAAGDNNET 234
Query: 131 DNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAME 190
N ++LV SQ+ ++GK G+ IK++ + I+V + SCA+
Sbjct: 235 GNASAASTPVSLRLLVLYSQAGWLLGKGGSVIKQMSADNGCEIRVLRDNLP----SCALL 290
Query: 191 FDNFVLISGESEAVKKALFAISAIMYKFSPRE-DIPLETTVREAPPSIIIPSDVPIYPPG 249
D I+GE ++V+K L A+S ++ P+E D + + + P
Sbjct: 291 NDKLCQITGEIDSVRKGLNAVSELLLAHPPKETDAVSGVHSSGSSSRSLFNQSDGL--PS 348
Query: 250 GLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELV 309
G+ N +P + G + DLQ + P+ E L
Sbjct: 349 GMQSNFH--IPLQGPSQANGPFDIIDLQPPIHGHASVPI-----------------ESLS 389
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSM 369
R+LCP +K+G +IGKGG +K+I++ +G +I V DT ++ +I+++ P D S
Sbjct: 390 FRMLCPQDKVGSIIGKGGNIVKTIQKDTGCEIKVLDTVPKSEDRIISISGPAHPSDGISP 449
Query: 370 AVEAVLLLQTKI----NDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRIS 425
A A+L +Q KI +D+ + RL+VS+ +GC++GK GSII E+RK + A + +
Sbjct: 450 AQNAILHVQRKIMLPTSDKKEGPAICRLIVSANQVGCVLGKGGSIIAEMRKLSGAFIIVL 509
Query: 426 KGDK-PKCADANDELVEVVGEVGSVRDALVQIILRLRDDALK-DR----DGSRNPPVG-A 478
DK P+ +DE+V++ G ++++AL+QI RLR+ + DR + PP G
Sbjct: 510 SKDKIPRGVPEHDEVVQISGSCEAIQEALMQITARLRNHLFRVDRMPAMGPNMRPPFGLL 569
Query: 479 DHIYSSGTGISMPPLLPSIPPVG-PLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSP-- 535
D + G P L +G PL + G+ LS LS+ D P
Sbjct: 570 DSQFGPFAGNHESPSLFHKDFMGRPLDGISAPWTVKGMRDLSD-------PLSISDIPGA 622
Query: 536 -YGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS 594
+ +S + P LT EVLVP + + + G L IR+ S A I +++ +
Sbjct: 623 GHREAGGFSGPGQPSMMPNLTAEVLVPRLIIPALCSEDGGCLDRIREFSEAKITVAEPIA 682
Query: 595 SRGDRVALISGTPEQKRAAENLIQAFIMA 623
D LISGTP+Q AA +L+QAF+M+
Sbjct: 683 DAMDIPVLISGTPDQMHAARSLVQAFVMS 711
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 143/333 (42%), Gaps = 65/333 (19%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIY--SHVKD 92
ES+ +R+LCP +GS+IGK G ++ +I+++T +KV+D P ++DR+++I +H D
Sbjct: 386 ESLSFRMLCPQDKVGSIIGKGGNIVKTIQKDTGCEIKVLDTVPKSEDRIISISGPAHPSD 445
Query: 93 KEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSA 152
+ AQ+A+L V I ++ K++ C+++V ++Q
Sbjct: 446 G--------------ISPAQNAILHVQRKIMLPTSD------KKEGPAICRLIVSANQVG 485
Query: 153 NIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAIS 212
++GK G+ I +R + I V KD E D V ISG EA+++AL I+
Sbjct: 486 CVLGKGGSIIAEMRKLSGAFIIVLSKDK---IPRGVPEHDEVVQISGSCEAIQEALMQIT 542
Query: 213 AIMYKFSPREDIPLETTVREAPPSIIIPSDVP-IYPPGGLYPNA-DPILPSRSVPSILGA 270
A + R D +P+ P + PP GL + P + PS+
Sbjct: 543 ARLRNHLFRVD--------------RMPAMGPNMRPPFGLLDSQFGPFAGNHESPSLFHK 588
Query: 271 ARVPDLQGYADTGNTWPVYSTGLS------LVSGLVGASQSE--------------ELVI 310
D G G + P G+ +S + GA E L
Sbjct: 589 ----DFMGRPLDGISAPWTVKGMRDLSDPLSISDIPGAGHREAGGFSGPGQPSMMPNLTA 644
Query: 311 RVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDV 343
VL P I + + GG + IR+ S A+I V
Sbjct: 645 EVLVPRLIIPALCSEDGGCLDRIREFSEAKITV 677
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 51/94 (54%), Gaps = 5/94 (5%)
Query: 6 KRYRSQRDNDRDGKNQKRRINEKDEKGNEESV-----IYRILCPDGVIGSVIGKSGKVIN 60
KR + +D +G+ + ++ ++ + +RILCP G+VIGK G +I
Sbjct: 9 KRPFQKNSSDYNGRGKWQKTKHSSPHKSQFKIEPGVPFFRILCPASKSGNVIGKGGAIIA 68
Query: 61 SIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKE 94
IR+ETR R++V PG +RV+ I + KD+E
Sbjct: 69 KIREETRMRIRVDRAAPGCDERVIFITAVDKDEE 102
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%)
Query: 309 VIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKS 368
R+LCP +K G VIGKGG I IR+ + +I VD DE VI +TA++ ++ S
Sbjct: 46 FFRILCPASKSGNVIGKGGAIIAKIREETRMRIRVDRAAPGCDERVIFITAVDKDEEASS 105
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 25/33 (75%)
Query: 143 QILVPSSQSANIIGKAGATIKRLRSKTRTSIKV 175
+IL P+S+S N+IGK GA I ++R +TR I+V
Sbjct: 48 RILCPASKSGNVIGKGGAIIAKIREETRMRIRV 80
>gi|255562910|ref|XP_002522460.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223538345|gb|EEF39952.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 559
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 171/596 (28%), Positives = 259/596 (43%), Gaps = 125/596 (20%)
Query: 3 DSGKRYRSQRD---------NDRDGKNQKRRINEKDEKGNEESVIYRILCPDGVIGSVIG 53
D GKR +Q D DG++ + ++ E +YR LCP IGS+IG
Sbjct: 7 DYGKRSNAQSDYGGGKRRNPTADDGEDSDHQQQQQQHTITNEDTVYRYLCPLRKIGSIIG 66
Query: 54 KSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDK-EPLCAAQ 112
+ G++ +R E+++ +++ + G ++R+VTIYS + E + F D E +C AQ
Sbjct: 67 RGGEIAKQLRSESKSNIRISEAMAGFEERIVTIYS------NSEESNLFGDSGEFVCPAQ 120
Query: 113 DALLKVHAAI-------------ANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAG 159
DAL VH I + + +++ ++LVP+ Q +IGK G
Sbjct: 121 DALFMVHDRIIAEDLNNSNNNNEEEDDEEEEEFGESKEQVVTVRMLVPADQIGCVIGKGG 180
Query: 160 ATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFS 219
I+ +RS+T I++ + P A+ D +LI GE V+KAL+ ++
Sbjct: 181 QVIQSIRSETGAQIRILKDEHLPP---LALSSDELLLIIGEPAVVRKALYQVA------- 230
Query: 220 PREDIPLETTVREAPPSIIIPSD----VPIYPPGG---LYPNADPILPSRSVPSILGAAR 272
T + E P +Y GG + P A S++G
Sbjct: 231 --------TRLHENPSRSQHLLLSSSSTNMYQSGGGMFVTPTAGA--------SLMGL-- 272
Query: 273 VPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKS 332
Y W S S S+E +R++CP IG VIGKGGG IK
Sbjct: 273 ------YGSYKGGWSS-----SYYSDQRDEGSSKEFSLRLVCPIGNIGGVIGKGGGIIKQ 321
Query: 333 IRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKIN-----DEDDD 387
IRQ S A I VD + D+C+I ++A E +D +S + A L LQ + + D D
Sbjct: 322 IRQESRASIKVDSSAAEGDDCIIFISAKEFFED-QSATLTAALRLQPRCSEKTERDSGDS 380
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDK-PKCADANDELVEVVGEV 446
+T RLLV IGC++GK G+II+E+R T+A +RI D PK A +DE+V++ G
Sbjct: 381 VITTRLLVPRSQIGCLMGKGGAIISEMRNVTRASIRILAEDNLPKVASEDDEMVQITGSH 440
Query: 447 GSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYD 506
+AL+ ++LRL+ + L RDG+ + PP LP IP
Sbjct: 441 DVASNALLHVVLRLKAN-LFGRDGALT---------------AFPPALPYIP-------- 476
Query: 507 QRADSGSGIGMLSSSSLYGYGSLSMGDS-------------PYGSMSSYSSKLYGG 549
+ ML S S S G P S + +S L GG
Sbjct: 477 ------VSMDMLDSPKYGNRDSQSRGRGYSSASGYSSRDLPPSESYGNNASSLNGG 526
>gi|242045198|ref|XP_002460470.1| hypothetical protein SORBIDRAFT_02g028920 [Sorghum bicolor]
gi|241923847|gb|EER96991.1| hypothetical protein SORBIDRAFT_02g028920 [Sorghum bicolor]
Length = 371
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 115/363 (31%), Positives = 178/363 (49%), Gaps = 61/363 (16%)
Query: 319 IGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQ 378
+G +IGKGG TI++++ +GA I + + + DE V+ ++A E+ D + S A +AV+ +
Sbjct: 8 VGSIIGKGGSTIRALQSETGACIKILELVADSDERVVAISARENSDMMHSPAQDAVVRVY 67
Query: 379 TKINDEDDD---TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDK-PKCAD 434
++I++ D RLLV S+ IGC++GK GSII E+RK T A +RI ++ P+CA
Sbjct: 68 SRISEASMDRSSPTPARLLVPSQHIGCLLGKGGSIITEMRKITGASIRIFGNEQIPRCAQ 127
Query: 435 ANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRN----PPVG------------A 478
NDE+V+V G S++DAL+ I R+RD L S PPVG
Sbjct: 128 RNDEMVQVTGSFQSIQDALLHITGRIRDVILPKPHPSGGMPPYPPVGNIPVHQSRQEPPP 187
Query: 479 DHIYSSGTGISMPPL-LPSIPPVGPLGY----DQRADSGSGIGMLSSSSL-YGYGSLSMG 532
H++ SG MPP + S P P+G+ D R + + + + Y YG G
Sbjct: 188 PHLHPSG---GMPPYPMHSFRPDAPMGHFETGDHRPPPVHSMEYMGADRMPYSYGGEQGG 244
Query: 533 DSPYGSMSS--------------------------------YSSKLYGGLPPPLTLEVLV 560
P+ S +S+ P T EV++
Sbjct: 245 PRPFLEQPSPRTWPPEAPRTNSEAPRNMPDAVLATDLRKGPVASENQVATPTSTTTEVVI 304
Query: 561 PANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAF 620
P +G V G +GS + IR++SGA+I + D K + + +I G PEQ + A++LI AF
Sbjct: 305 PCKYIGFVCGNSGSEIEEIRQMSGASITVHDPKPGDTNSIVVICGDPEQTKKAQSLIHAF 364
Query: 621 IMA 623
I
Sbjct: 365 IFC 367
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 94/363 (25%), Positives = 148/363 (40%), Gaps = 74/363 (20%)
Query: 47 VIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKE 106
++GS+IGK G I +++ ET A +K+++ + +RVV I + E D +
Sbjct: 7 MVGSIIGKGGSTIRALQSETGACIKILELVADSDERVVAISAR-------ENSDMMHSP- 58
Query: 107 PLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLR 166
AQDA+++V++ I+ A + R ++LVPS ++GK G+ I +R
Sbjct: 59 ----AQDAVVRVYSRISEASMD-------RSSPTPARLLVPSQHIGCLLGKGGSIITEMR 107
Query: 167 SKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAI--------------S 212
T SI++ +E CA D V ++G ++++ AL I S
Sbjct: 108 KITGASIRIF---GNEQIPRCAQRNDEMVQVTGSFQSIQDALLHITGRIRDVILPKPHPS 164
Query: 213 AIMYKFSPREDIPLETTVREAPPSIIIPS-DVPIYP--------PGGLYPNADPILPSRS 263
M + P +IP+ + +E PP + PS +P YP P G + D P
Sbjct: 165 GGMPPYPPVGNIPVHQSRQEPPPPHLHPSGGMPPYPMHSFRPDAPMGHFETGDHRPPPVH 224
Query: 264 VPSILGAARVPDLQGYADTG----------NTWP-----------------VYSTGL--S 294
+GA R+P G G TWP V +T L
Sbjct: 225 SMEYMGADRMPYSYGGEQGGPRPFLEQPSPRTWPPEAPRTNSEAPRNMPDAVLATDLRKG 284
Query: 295 LVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECV 354
V+ + V+ P IG V G G I+ IRQ SGA I V D K +
Sbjct: 285 PVASENQVATPTSTTTEVVIPCKYIGFVCGNSGSEIEEIRQMSGASITVHDPKPGDTNSI 344
Query: 355 ITV 357
+ +
Sbjct: 345 VVI 347
>gi|224095794|ref|XP_002310483.1| predicted protein [Populus trichocarpa]
gi|222853386|gb|EEE90933.1| predicted protein [Populus trichocarpa]
Length = 747
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 129/451 (28%), Positives = 223/451 (49%), Gaps = 47/451 (10%)
Query: 37 VIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDV 96
V++R+LC D IG +IGK G +I ++Q+T A++++ D + DRV+TI V +
Sbjct: 58 VLFRLLCHDSRIGGIIGKGGNIIKGLQQQTGAKIRIEDAPLESPDRVITIVGSVT--QSS 115
Query: 97 EVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIG 156
V + Q+AL++V I A ++D C++L S +IG
Sbjct: 116 VVFSGIGSAIEVSKGQEALVRVFERILEV---AAESDSVAGGLVSCRLLAEISSVGAVIG 172
Query: 157 KAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMY 216
K G T++++R +KV + +CA + + I G+ AVKK L A+S +
Sbjct: 173 KGGKTVEKIRKDCGCKVKVL----IDKLPACASSNEEMIEIEGDVSAVKKGLVAVSHRLQ 228
Query: 217 KFSPREDI------PLETTVREAPPSI---IIPSDVPIYPPGGLYPNADPILPSRSVPSI 267
P + P+E R + P + I+P + P + A P + + S+
Sbjct: 229 DCQPVDKTRVISSKPVEAVSRVSFPEVGVEILPQHSAVRPTIAQHSVAPPTVTNSSI--- 285
Query: 268 LGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGG 327
D + ++S VS L ++ +++V R+LC +++G VIGKGG
Sbjct: 286 -------------DYASGTHLFSLESERVSTLDTSTPQQQVVFRILCNNDRVGGVIGKGG 332
Query: 328 GTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKI------ 381
+ +++ +GA I + DE +ITVTA E+P+ S A + V+L+ +++
Sbjct: 333 NIVTALQNETGATISIGPKVAGCDERLITVTASENPESRYSAAQKTVVLVFSRVVESVIE 392
Query: 382 -----NDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDK--PKCAD 434
+ V++RL+VS +GC++GK G+II+E+RK T +RI D+ PKC
Sbjct: 393 KGLDPGSSEGSPVSVRLVVSPNQVGCLLGKGGTIISEMRKATSTSIRIIGRDQGNPKCVP 452
Query: 435 ANDELVEVVGEVGSVRDALVQIILRLRDDAL 465
ND +VE++G+ +V+D++ I RLRD+
Sbjct: 453 ENDHVVEILGDFLNVKDSIYHITGRLRDNLF 483
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 91/193 (47%), Gaps = 15/193 (7%)
Query: 21 QKRRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAK 80
+ R++ D ++ V++RILC + +G VIGK G ++ +++ ET A + + G
Sbjct: 297 ESERVSTLDTSTPQQQVVFRILCNNDRVGGVIGKGGNIVTALQNETGATISIGPKVAGCD 356
Query: 81 DRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAV-ANATDNDKKRKEK 139
+R++T+ + N + AAQ ++ V + + +V D
Sbjct: 357 ERLITVTA------------SENPESRYSAAQKTVVLVFSRVVESVIEKGLDPGSSEGSP 404
Query: 140 EECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISG 199
+++V +Q ++GK G I +R T TSI++ +D P C E D+ V I G
Sbjct: 405 VSVRLVVSPNQVGCLLGKGGTIISEMRKATSTSIRIIGRDQGNP--KCVPENDHVVEILG 462
Query: 200 ESEAVKKALFAIS 212
+ VK +++ I+
Sbjct: 463 DFLNVKDSIYHIT 475
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 49/69 (71%)
Query: 555 TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAE 614
T+E+++P + G V G+ GSNLA +R+ SGA + + + + DR+ +ISGTP++ +AA+
Sbjct: 676 TVEIVIPEHTFGSVYGENGSNLARLRQFSGAKVIVHEPRLGTSDRIIVISGTPDETQAAQ 735
Query: 615 NLIQAFIMA 623
+L+ AFI+
Sbjct: 736 SLLHAFILT 744
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 152/331 (45%), Gaps = 33/331 (9%)
Query: 305 SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITV------- 357
S ++ R+LC ++IG +IGKGG IK ++Q +GA+I ++D + VIT+
Sbjct: 55 SGHVLFRLLCHDSRIGGIIGKGGNIIKGLQQQTGAKIRIEDAPLESPDRVITIVGSVTQS 114
Query: 358 --------TAIESPDDIKSM--AVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKS 407
+AIE +++ E +L + + + V+ RLL +G +IGK
Sbjct: 115 SVVFSGIGSAIEVSKGQEALVRVFERILEVAAESDSVAGGLVSCRLLAEISSVGAVIGKG 174
Query: 408 GSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRD--DAL 465
G + +IRK V++ P CA +N+E++E+ G+V +V+ LV + RL+D
Sbjct: 175 GKTVEKIRKDCGCKVKVLIDKLPACASSNEEMIEIEGDVSAVKKGLVAVSHRLQDCQPVD 234
Query: 466 KDRDGSRNPPVGADHIYSSGTGISMPPLLPSI-PPVGPLGYDQRADSGSGIGMLSSSSLY 524
K R S P + G+ + P ++ P + + S I S + L+
Sbjct: 235 KTRVISSKPVEAVSRVSFPEVGVEILPQHSAVRPTIAQHSVAPPTVTNSSIDYASGTHLF 294
Query: 525 GYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISG 584
S+ ++ + + + + +L + VG VIGK G+ + ++ +G
Sbjct: 295 -----SLESERVSTLDTSTPQQQ------VVFRILCNNDRVGGVIGKGGNIVTALQNETG 343
Query: 585 ATIEMSDSKSSRGDRVALISGT--PEQKRAA 613
ATI + + +R+ ++ + PE + +A
Sbjct: 344 ATISIGPKVAGCDERLITVTASENPESRYSA 374
>gi|388503270|gb|AFK39701.1| unknown [Medicago truncatula]
Length = 110
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 82/110 (74%), Positives = 93/110 (84%), Gaps = 2/110 (1%)
Query: 517 MLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGG--LPPPLTLEVLVPANAVGKVIGKAGS 574
M SS S YGY S SM D+ YGSMSSY++ LY G LPP TLE++VPANAVGKV+GK G+
Sbjct: 1 MHSSRSHYGYDSYSMEDNGYGSMSSYATNLYEGHRLPPLSTLEMVVPANAVGKVMGKGGA 60
Query: 575 NLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFIMAT 624
NLANIRKISGAT+E+S+SKS RGDRVALISGT E+KRAAENLIQAFI AT
Sbjct: 61 NLANIRKISGATVEISESKSYRGDRVALISGTSEEKRAAENLIQAFITAT 110
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 33/50 (66%)
Query: 309 VIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
+ ++ P N +G+V+GKGG + +IR+ SGA +++ ++K R + V ++
Sbjct: 41 TLEMVVPANAVGKVMGKGGANLANIRKISGATVEISESKSYRGDRVALIS 90
>gi|218187831|gb|EEC70258.1| hypothetical protein OsI_01061 [Oryza sativa Indica Group]
Length = 722
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 154/548 (28%), Positives = 251/548 (45%), Gaps = 84/548 (15%)
Query: 97 EVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIG 156
E E PL A + LL N + N T + + ++LV SQ ++G
Sbjct: 233 EAQLELEKGMPL-AVKAILLVFDRIFVNEMENGTGDASGERNHVSLRLLVLDSQVGWLLG 291
Query: 157 KAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMY 216
K G+ IK++ + + I+V+ + CA+ D I+GE ++V+K L ++ +++
Sbjct: 292 KNGSVIKQMSTDSCCEIRVS----KDKLPLCALPRDELCQITGELDSVRKGLNTVAQLLF 347
Query: 217 KFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDL 276
P+E +D + S P++ P+
Sbjct: 348 THPPKE--------------------------------SDVLGAHNSGPNVAHLPNFPE- 374
Query: 277 QGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQA 336
+L+ G G+ E L R+LC +K+G +IGKGG IKSI+
Sbjct: 375 -----------------ALMHGH-GSVPPEPLTFRLLCSSDKVGGIIGKGGNNIKSIQND 416
Query: 337 SGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKI---NDEDDDTVTIRL 393
+G +I V DT ++ ++ ++ P D S A A+L +Q KI ++ + RL
Sbjct: 417 TGCEIKVLDTVPKSEDRIVFISGPAHPGDGISPAQNAILHVQRKIVPTSNTKEGPAICRL 476
Query: 394 LVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDK-PKCADANDELVEVVGEVGSVRDA 452
+VS +GC++GK GSII E+RK + A + + DK PK NDE+V++ G ++++A
Sbjct: 477 IVSPNQVGCLLGKGGSIIAEMRKLSGAHIIVLSKDKIPKGVPENDEVVQISGASEAIQEA 536
Query: 453 LVQIILRLRDDALKDRDGSR----NPPVG-ADHIYSSGTG----ISMPPLLPSIPPVGPL 503
L+QI RLR+ +DR S PP G D + S G IS P + P++P
Sbjct: 537 LMQITARLRNHLFRDRMASTVPNVQPPFGLVDPQFGSYAGNHDSIS-PRIFPNVPQFHKD 595
Query: 504 GYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPP--------LT 555
+ D S + + G +S+ D P + + GG P P +T
Sbjct: 596 FIGRPLDEMSAPWTMKGMQVVG-DPISLPDIP-----GMAHRGMGGFPGPGQPSIVSTIT 649
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAEN 615
+V+VP + + G+ G L IR+ SGA I ++D + D LISGTP+Q AA +
Sbjct: 650 ADVMVPKLVLPSLCGEDGGCLNRIREFSGAKITVADPMGNAMDTAILISGTPDQMHAARS 709
Query: 616 LIQAFIMA 623
LIQAF+++
Sbjct: 710 LIQAFVLS 717
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 95/357 (26%), Positives = 149/357 (41%), Gaps = 59/357 (16%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIY--SHVKD 92
E + +R+LC +G +IGK G I SI+ +T +KV+D P ++DR+V I +H D
Sbjct: 386 EPLTFRLLCSSDKVGGIIGKGGNNIKSIQNDTGCEIKVLDTVPKSEDRIVFISGPAHPGD 445
Query: 93 KEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSA 152
+ AQ+A+L V I T N K+ C+++V +Q
Sbjct: 446 G--------------ISPAQNAILHVQRKIV-----PTSNTKEGPAI--CRLIVSPNQVG 484
Query: 153 NIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAIS 212
++GK G+ I +R + I V KD E D V ISG SEA+++AL I+
Sbjct: 485 CLLGKGGSIIAEMRKLSGAHIIVLSKDK---IPKGVPENDEVVQISGASEAIQEALMQIT 541
Query: 213 AIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGG------LYPNADPI-------- 258
A + R+ + T PP ++ Y ++PN
Sbjct: 542 ARLRNHLFRDRM-ASTVPNVQPPFGLVDPQFGSYAGNHDSISPRIFPNVPQFHKDFIGRP 600
Query: 259 LPSRSVPSILGAARV-------PDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIR 311
L S P + +V PD+ G A G S+VS + +LV+
Sbjct: 601 LDEMSAPWTMKGMQVVGDPISLPDIPGMAHRGMGGFPGPGQPSIVSTITADVMVPKLVLP 660
Query: 312 VLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKS 368
LC G+ GG + IR+ SGA+I V D N + I ++ +PD + +
Sbjct: 661 SLC---------GEDGGCLNRIREFSGAKITVADPMGNAMDTAILISG--TPDQMHA 706
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 44/73 (60%)
Query: 38 IYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVE 97
I+RILCP G+VIGK G +I IRQET +++V + PG +RV+ I + KD+E
Sbjct: 89 IFRILCPTSKSGNVIGKGGGIIAKIRQETGVKIRVDEVVPGCDERVIVITAIDKDREVSH 148
Query: 98 VDDEFNDKEPLCA 110
V + ND C+
Sbjct: 149 VQTKENDGGVACS 161
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 44/75 (58%), Gaps = 8/75 (10%)
Query: 309 VIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKS 368
+ R+LCP +K G VIGKGGG I IRQ +G +I VD+ DE VI +TAI+ ++
Sbjct: 89 IFRILCPTSKSGNVIGKGGGIIAKIRQETGVKIRVDEVVPGCDERVIVITAIDKDREVSH 148
Query: 369 MAVEAVLLLQTKIND 383
+QTK ND
Sbjct: 149 --------VQTKEND 155
>gi|356528011|ref|XP_003532599.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 433
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 110/352 (31%), Positives = 191/352 (54%), Gaps = 46/352 (13%)
Query: 296 VSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVI 355
VS L + +E+ R++C +++G VIGKGG +++++ SGA I V + ++ ++
Sbjct: 101 VSALDPKAYQQEVTFRIICSNDRVGAVIGKGGSIVRALQNESGAIISVGPSLVECEDRLV 160
Query: 356 TVTAIESPDDIKSMAVEAVLLLQTK-----------INDEDDDTVTIRLLVSSKVIGCII 404
T+TA E+P+ S A +AV+L+ +K + + + VT RL+V S +GC++
Sbjct: 161 TITASENPESTYSPAQKAVVLVFSKSVEAGVEKGLELGSKKEPYVTARLVVPSNQVGCLL 220
Query: 405 GKSGSIINEIRKRTKADVRISKGDK-PKCADANDELVEVVGEVGSVRDALVQIILRLRDD 463
GK G+I++E+RK T A++R+ D+ P C ND+LV++ G +V+ A+ RLRD
Sbjct: 221 GKGGAIVSEMRKATGANIRVIGNDQVPMCVSDNDQLVQISGVFSNVQAAIHNATGRLRDH 280
Query: 464 AL---KDRDGSRN---------PPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADS 511
++ G+R+ P + H + S+P L P G + R +
Sbjct: 281 LFVSTQNSGGARSLSSVLAGGQPTLAISHSLNRH---SLPGLQA---PQTVAGINSRGTN 334
Query: 512 GSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGK 571
G G++S G L + GS ++ + T++++VP + +G V G+
Sbjct: 335 GVSRGLISRK-----GGLEL---ISGSKTAIVTNT--------TVQIVVPDDVIGSVYGE 378
Query: 572 AGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFIMA 623
GSNLA +R+ISGA + + + + DR +ISGTP++ RAA++L+QAFI+A
Sbjct: 379 NGSNLARLRQISGAKVIVHEPRPGTSDRTIIISGTPDETRAAQSLLQAFILA 430
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 86/367 (23%), Positives = 161/367 (43%), Gaps = 47/367 (12%)
Query: 24 RINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRV 83
R++ D K ++ V +RI+C + +G+VIGK G ++ +++ E+ A + V +DR+
Sbjct: 100 RVSALDPKAYQQEVTFRIICSNDRVGAVIGKGGSIVRALQNESGAIISVGPSLVECEDRL 159
Query: 84 VTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHA-AIANAVANATDNDKKRKEKEEC 142
VTI + N + AQ A++ V + ++ V + K++
Sbjct: 160 VTITA------------SENPESTYSPAQKAVVLVFSKSVEAGVEKGLELGSKKEPYVTA 207
Query: 143 QILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESE 202
+++VPS+Q ++GK GA + +R T +I+V D C + D V ISG
Sbjct: 208 RLVVPSNQVGCLLGKGGAIVSEMRKATGANIRVIGNDQ---VPMCVSDNDQLVQISGVFS 264
Query: 203 AVKKALFAISAIM--YKFSPREDI----PLETTVREAPPSIIIPSDVPIYPPGGLYPNAD 256
V+ A+ + + + F ++ L + + P++ I
Sbjct: 265 NVQAAIHNATGRLRDHLFVSTQNSGGARSLSSVLAGGQPTLAISHS-------------- 310
Query: 257 PILPSRSVPSILGAARVPDLQGYADTGNTWPVYST--GLSLVSGLVGASQSEELVIRVLC 314
L S+P + V + G + + S GL L+SG A + V +++
Sbjct: 311 --LNRHSLPGLQAPQTVAGINSRGTNGVSRGLISRKGGLELISGSKTAIVTNTTV-QIVV 367
Query: 315 PFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAV 374
P + IG V G+ G + +RQ SGA++ V + + + I ++ +PD+ ++ A
Sbjct: 368 PDDVIGSVYGENGSNLARLRQISGAKVIVHEPRPGTSDRTIIISG--TPDETRA----AQ 421
Query: 375 LLLQTKI 381
LLQ I
Sbjct: 422 SLLQAFI 428
>gi|115479947|ref|NP_001063567.1| Os09g0498600 [Oryza sativa Japonica Group]
gi|113631800|dbj|BAF25481.1| Os09g0498600 [Oryza sativa Japonica Group]
gi|215695028|dbj|BAG90219.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 398
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 121/371 (32%), Positives = 189/371 (50%), Gaps = 54/371 (14%)
Query: 306 EELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDD 365
+E+V R++C +G +IGKGG TI++++ +GA I + + + +E VI ++A E+ +
Sbjct: 24 QEIVFRMICLNEMVGSIIGKGGSTIRALQSETGASIKIIEPNSDSEERVIVISAHENSEM 83
Query: 366 IKSMAVEAVLLLQTKINDEDDD---TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADV 422
+ S A +AVL + ++I++ D VT RLLV S+ IGC++GK GSII E+RK T A +
Sbjct: 84 MHSPAQDAVLRVHSRISESSMDKSSAVTARLLVPSQHIGCLLGKGGSIIAEMRKITGAGI 143
Query: 423 RISKGDK-PKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRN-------- 473
RI ++ P+CA NDELV+V G S++DAL+ I R+RD + +
Sbjct: 144 RIFGNEQIPRCAQRNDELVQVTGSFQSIQDALLHITGRIRDVIIPMKPHPGGGMPPYPPG 203
Query: 474 ---PPVGA--DHIYSSGTGISMPPL-LPSI---PPVGPLGY-DQRADSGSGIGMLSSSSL 523
PP + TG MPP +PS P+GP D R + + + +
Sbjct: 204 GNAPPHHPRQEPAPPHPTG-GMPPYPMPSFRADRPMGPFDMVDHRPPPPHSMEHMGADRM 262
Query: 524 -YGYGSLSMG------DSPYGSM---SSYSSKLYGGLP---PPL---------TLEVLVP 561
Y YG G D P S + +S+ +P PP T +V P
Sbjct: 263 PYSYGCEQGGGPRPFLDQPSPSAWAPEAPNSEAPRNMPETVPPADFRKGAVAGTNQVATP 322
Query: 562 ANA---------VGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRA 612
+NA +G + G GS+LA I+K+SGATI + K + + +I G P+Q +
Sbjct: 323 SNATEVIIPRKYIGFICGANGSDLAEIKKMSGATITVHHPKPGDANALVIICGDPDQTKK 382
Query: 613 AENLIQAFIMA 623
A++L+ AFI
Sbjct: 383 AQSLLHAFIFC 393
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 105/434 (24%), Positives = 175/434 (40%), Gaps = 88/434 (20%)
Query: 34 EESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDK 93
E+ +++R++C + ++GS+IGK G I +++ ET A +K+++P +++RV+ I +H
Sbjct: 23 EQEIVFRMICLNEMVGSIIGKGGSTIRALQSETGASIKIIEPNSDSEERVIVISAH---- 78
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
E+ E+ AQDA+L+VH+ I+ + + + R +LVPS
Sbjct: 79 ENSEMMHS--------PAQDAVLRVHSRISESSMDKSSAVTAR-------LLVPSQHIGC 123
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISA 213
++GK G+ I +R T I++ +E CA D V ++G ++++ AL I+
Sbjct: 124 LLGKGGSIIAEMRKITGAGIRIF---GNEQIPRCAQRNDELVQVTGSFQSIQDALLHITG 180
Query: 214 ------IMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSI 267
I K P +P APP P +P GG+ P +PS
Sbjct: 181 RIRDVIIPMKPHPGGGMPPYPPGGNAPPHHPRQEPAPPHPTGGMPPYP---MPSFRADRP 237
Query: 268 LGA-----ARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRV 322
+G R P G YS G
Sbjct: 238 MGPFDMVDHRPPPPHSMEHMGADRMPYSYGCE---------------------------- 269
Query: 323 IGKGGGTIKSIRQAS----GAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQ 378
+GGG + Q S + + N E V P D + AV +
Sbjct: 270 --QGGGPRPFLDQPSPSAWAPEAPNSEAPRNMPETV-------PPADFRKGAVAGTNQVA 320
Query: 379 TKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDE 438
T N + +++ K IG I G +GS + EI+K + A + + PK DAN
Sbjct: 321 TPSNATE-------VIIPRKYIGFICGANGSDLAEIKKMSGATITV---HHPKPGDAN-A 369
Query: 439 LVEVVGEVGSVRDA 452
LV + G+ + A
Sbjct: 370 LVIICGDPDQTKKA 383
>gi|145347410|ref|XP_001418160.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578389|gb|ABO96453.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 651
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 175/666 (26%), Positives = 295/666 (44%), Gaps = 135/666 (20%)
Query: 16 RDGKNQKRRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDP 75
R G+ + R + + + + SV YR+LCP IG VIGK G+VI + R ET ARVKV
Sbjct: 37 RSGERRHRGEHGSNGEFRDASVRYRLLCPTTRIGRVIGKEGRVIKATRAETGARVKVAPT 96
Query: 76 FPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIAN----------- 124
GA +RV+ + S +D+ V + D E + A+ AL ++ I
Sbjct: 97 TRGADERVILVAS----GDDLTVGE---DGEGMTTAEVALFRIFDTITGEEGVTAARGGE 149
Query: 125 --AVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASE 182
A+ + C++LVP Q ++IGK G I +R+ + +++V P +
Sbjct: 150 GEGEGEASGGSTRGASTPICRLLVPRVQVGSLIGKGGTVISAIRASSGATVRVMPANM-- 207
Query: 183 PTHSCAMEFDNFVLISGESE--------------AVKKALFAISAIMYKFSPREDIPLET 228
+CA + D + I+ S +VK AL I+ + ++ P ++ E+
Sbjct: 208 -LPACASQGDELLQITAPSRDADGAERDQKLSMASVKNALRMIAKHLREY-PSKNAATES 265
Query: 229 TVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTWPV 288
P + + P V S G + G+
Sbjct: 266 N----------------RSPFEAFMIGNKTAPHAGVES----------PGAKNGGH---- 295
Query: 289 YSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD 348
ST ++L V E+ R+LCP +K G VIG+ G I+ IR +GA++ V + +
Sbjct: 296 MSTRMNLNG--VYVPGGTEITFRLLCPVSKTGSVIGRNGEVIQQIRSQTGAKVKVCEQVN 353
Query: 349 NRDECVITVTAIESPDDIKSMAVEAVLLLQTK--INDEDDDTVTI--RLLVSSKVIGCII 404
+E +I V++ S D + M V L + I + + + + RLLV + IGC+I
Sbjct: 354 GAEERIICVSS--SDDGLAPMLAAQVALFRVYRCIVESAGNEIPLPFRLLVQTSQIGCLI 411
Query: 405 GKSGSIINEIRKRTKADVRISKGDK-PKCADANDELVEVVGEVGSVRDAL-VQIIL-RLR 461
GK GSII +IR T A VR+ + P CA+ +DEL+E +G+ + AL ++I+ RLR
Sbjct: 412 GKGGSIIKQIRNETGATVRVLPSEALPSCAN-DDELLE-IGQWPADACALGIRIVSGRLR 469
Query: 462 DDALKDRDGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSS 521
+ A+ + S+ + +G+D +
Sbjct: 470 GNIRHK---------AAERLTSTADAQNTQ----------TMGFD---------ATWQQA 501
Query: 522 SLYGYGSLSMGDSPYGS----MSSYSSKLYGGLPPPL----------TLEVLVPANAVGK 567
L YG M + YGS M S + G PP+ ++++ + + +G
Sbjct: 502 ELIPYG---MTQTAYGSPETVMMSKTKSTGGARAPPVEIAPGVSVVNSVQMAISSQHIGS 558
Query: 568 VIGKAGSNLANIRKISGATIEM---------SDSKSSRGDRVALISGTPEQKRAAENLIQ 618
V+G+ G N++ R++SGA I++ + +S DR+ ISG+ EQ +A+++IQ
Sbjct: 559 VLGRGGCNISLARQVSGARIKLYPGAAGSRRTADRSVDSDRLLEISGSSEQVASAQDIIQ 618
Query: 619 AFIMAT 624
FI ++
Sbjct: 619 RFIASS 624
>gi|218202392|gb|EEC84819.1| hypothetical protein OsI_31905 [Oryza sativa Indica Group]
Length = 617
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 121/371 (32%), Positives = 189/371 (50%), Gaps = 54/371 (14%)
Query: 306 EELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDD 365
+E+V R++C +G +IGKGG TI++++ +GA I + + + +E VI ++A E+ +
Sbjct: 243 QEIVFRMICLNEMVGSIIGKGGSTIRALQSETGASIKIIEPNSDSEERVIVISAHENSEM 302
Query: 366 IKSMAVEAVLLLQTKINDEDDD---TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADV 422
+ S A +AVL + ++I++ D VT RLLV S+ IGC++GK GSII E+RK T A +
Sbjct: 303 MHSPAQDAVLRVHSRISESSMDKSSAVTARLLVPSQHIGCLLGKGGSIIAEMRKITGAGI 362
Query: 423 RISKGDK-PKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRN-------- 473
RI ++ P+CA NDELV+V G S++DAL+ I R+RD + +
Sbjct: 363 RIFGNEQIPRCAQRNDELVQVTGSFQSIQDALLHITGRIRDVIIPMKPHPGGGMPPYPPG 422
Query: 474 ---PPVG--ADHIYSSGTGISMPPL-LPSI---PPVGPLGY-DQRADSGSGIGMLSSSSL 523
PP + TG MPP +PS P+GP D R + + + +
Sbjct: 423 GNAPPHHPRQEPAPPHPTG-GMPPYPMPSFRADRPMGPFDMVDHRPPPPHSMEHMGADRM 481
Query: 524 -YGYGSLSMG------DSPYGSM---SSYSSKLYGGLP---PPL---------TLEVLVP 561
Y YG G D P S + +S+ +P PP T +V P
Sbjct: 482 PYSYGCEQGGGPRPFLDQPSPSAWAPEAPNSEAPRNMPETVPPADFRKGAVAGTNQVATP 541
Query: 562 ANA---------VGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRA 612
+NA +G + G GS+LA I+K+SGATI + K + + +I G P+Q +
Sbjct: 542 SNATEVIIPRKYIGFICGANGSDLAEIKKMSGATITVHHPKPGDANALVIICGDPDQTKK 601
Query: 613 AENLIQAFIMA 623
A++L+ AFI
Sbjct: 602 AQSLLHAFIFC 612
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 105/434 (24%), Positives = 175/434 (40%), Gaps = 88/434 (20%)
Query: 34 EESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDK 93
E+ +++R++C + ++GS+IGK G I +++ ET A +K+++P +++RV+ I +H
Sbjct: 242 EQEIVFRMICLNEMVGSIIGKGGSTIRALQSETGASIKIIEPNSDSEERVIVISAH---- 297
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
E+ E+ AQDA+L+VH+ I+ + + + R +LVPS
Sbjct: 298 ENSEMMHS--------PAQDAVLRVHSRISESSMDKSSAVTAR-------LLVPSQHIGC 342
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISA 213
++GK G+ I +R T I++ +E CA D V ++G ++++ AL I+
Sbjct: 343 LLGKGGSIIAEMRKITGAGIRIF---GNEQIPRCAQRNDELVQVTGSFQSIQDALLHITG 399
Query: 214 ------IMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSI 267
I K P +P APP P +P GG+ P +PS
Sbjct: 400 RIRDVIIPMKPHPGGGMPPYPPGGNAPPHHPRQEPAPPHPTGGMPPYP---MPSFRADRP 456
Query: 268 LGA-----ARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRV 322
+G R P G YS G
Sbjct: 457 MGPFDMVDHRPPPPHSMEHMGADRMPYSYGCE---------------------------- 488
Query: 323 IGKGGGTIKSIRQ----ASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQ 378
+GGG + Q A + + N E V P D + AV +
Sbjct: 489 --QGGGPRPFLDQPSPSAWAPEAPNSEAPRNMPETV-------PPADFRKGAVAGTNQVA 539
Query: 379 TKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDE 438
T N + +++ K IG I G +GS + EI+K + A + + PK DAN
Sbjct: 540 TPSNATE-------VIIPRKYIGFICGANGSDLAEIKKMSGATITV---HHPKPGDAN-A 588
Query: 439 LVEVVGEVGSVRDA 452
LV + G+ + A
Sbjct: 589 LVIICGDPDQTKKA 602
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 68/310 (21%), Positives = 123/310 (39%), Gaps = 65/310 (20%)
Query: 309 VIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKS 368
+R+LCP ++ ++R AS + VD DE V++++ ++P +
Sbjct: 37 TLRILCPSSRA-----------SALRGAS-RDLHVDQPPVG-DEAVLSISGPDAPA-VAV 82
Query: 369 MAVEAVLLLQTKIND-------EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKAD 421
A E V+ + ++ E V R+L +S +GC++GK G + +R+ + A
Sbjct: 83 RAWERVVGHRVGGDEAAGEEEREVPGVVGCRMLAASGQVGCVLGKGGKTVERMRQESGAQ 142
Query: 422 VRI--SKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGAD 479
+R+ ++ P A DEL+ + G +VR AL+ + L+D+ D
Sbjct: 143 IRVFRNRDQLPPWAAPVDELIHISGNFSAVRKALLLVTTCLQDNPRPDASNF-------- 194
Query: 480 HIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSM 539
G + S GY SM D
Sbjct: 195 --------------------------PPGRFGPPGPVGIDPHSQRGYLPPSMPDY---HA 225
Query: 540 SSYSSKLYGGLP-----PPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS 594
+YSS + P + ++ VG +IGK GS + ++ +GA+I++ + S
Sbjct: 226 RNYSSNMAAPGPRFFVEQEIVFRMICLNEMVGSIIGKGGSTIRALQSETGASIKIIEPNS 285
Query: 595 SRGDRVALIS 604
+RV +IS
Sbjct: 286 DSEERVIVIS 295
>gi|222641854|gb|EEE69986.1| hypothetical protein OsJ_29891 [Oryza sativa Japonica Group]
Length = 609
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 121/370 (32%), Positives = 189/370 (51%), Gaps = 54/370 (14%)
Query: 306 EELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDD 365
+E+V R++C +G +IGKGG TI++++ +GA I + + + +E VI ++A E+ +
Sbjct: 235 QEIVFRMICLNEMVGSIIGKGGSTIRALQSETGASIKIIEPNSDSEERVIVISAHENSEM 294
Query: 366 IKSMAVEAVLLLQTKINDEDDD---TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADV 422
+ S A +AVL + ++I++ D VT RLLV S+ IGC++GK GSII E+RK T A +
Sbjct: 295 MHSPAQDAVLRVHSRISESSMDKSSAVTARLLVPSQHIGCLLGKGGSIIAEMRKITGAGI 354
Query: 423 RISKGDK-PKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRN-------- 473
RI ++ P+CA NDELV+V G S++DAL+ I R+RD + +
Sbjct: 355 RIFGNEQIPRCAQRNDELVQVTGSFQSIQDALLHITGRIRDVIIPMKPHPGGGMPPYPPG 414
Query: 474 ---PPVGA--DHIYSSGTGISMPPL-LPSI---PPVGPLGY-DQRADSGSGIGMLSSSSL 523
PP + TG MPP +PS P+GP D R + + + +
Sbjct: 415 GNAPPHHPRQEPAPPHPTG-GMPPYPMPSFRADRPMGPFDMVDHRPPPPHSMEHMGADRM 473
Query: 524 -YGYGSLSMG------DSPYGSM---SSYSSKLYGGLP---PPL---------TLEVLVP 561
Y YG G D P S + +S+ +P PP T +V P
Sbjct: 474 PYSYGCEQGGGPRPFLDQPSPSAWAPEAPNSEAPRNMPETVPPADFRKGAVAGTNQVATP 533
Query: 562 ANA---------VGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRA 612
+NA +G + G GS+LA I+K+SGATI + K + + +I G P+Q +
Sbjct: 534 SNATEVIIPRKYIGFICGANGSDLAEIKKMSGATITVHHPKPGDANALVIICGDPDQTKK 593
Query: 613 AENLIQAFIM 622
A++L+ AFI
Sbjct: 594 AQSLLHAFIF 603
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 105/434 (24%), Positives = 174/434 (40%), Gaps = 88/434 (20%)
Query: 34 EESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDK 93
E+ +++R++C + ++GS+IGK G I +++ ET A +K+++P +++RV+ I +H
Sbjct: 234 EQEIVFRMICLNEMVGSIIGKGGSTIRALQSETGASIKIIEPNSDSEERVIVISAH---- 289
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
E+ E+ AQDA+L+VH+ I+ + + + R +LVPS
Sbjct: 290 ENSEMMHS--------PAQDAVLRVHSRISESSMDKSSAVTAR-------LLVPSQHIGC 334
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISA 213
++GK G+ I +R T I++ +E CA D V ++G ++++ AL I+
Sbjct: 335 LLGKGGSIIAEMRKITGAGIRIF---GNEQIPRCAQRNDELVQVTGSFQSIQDALLHITG 391
Query: 214 ------IMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSI 267
I K P +P APP P +P GG+ P +PS
Sbjct: 392 RIRDVIIPMKPHPGGGMPPYPPGGNAPPHHPRQEPAPPHPTGGMPPYP---MPSFRADRP 448
Query: 268 LGA-----ARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRV 322
+G R P G YS G
Sbjct: 449 MGPFDMVDHRPPPPHSMEHMGADRMPYSYGCE---------------------------- 480
Query: 323 IGKGGGTIKSIRQAS----GAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQ 378
+GGG + Q S + + N E V P D + AV +
Sbjct: 481 --QGGGPRPFLDQPSPSAWAPEAPNSEAPRNMPETV-------PPADFRKGAVAGTNQVA 531
Query: 379 TKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDE 438
T N +++ K IG I G +GS + EI+K + A + + PK DAN
Sbjct: 532 TPSN-------ATEVIIPRKYIGFICGANGSDLAEIKKMSGATITV---HHPKPGDAN-A 580
Query: 439 LVEVVGEVGSVRDA 452
LV + G+ + A
Sbjct: 581 LVIICGDPDQTKKA 594
>gi|224067136|ref|XP_002302373.1| predicted protein [Populus trichocarpa]
gi|222844099|gb|EEE81646.1| predicted protein [Populus trichocarpa]
Length = 680
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 115/359 (32%), Positives = 182/359 (50%), Gaps = 50/359 (13%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
L R+LC ++G VIGKGG IK ++Q +G I V + + ++ VI ++ + PDD
Sbjct: 324 LTFRLLCHNERVGGVIGKGGTIIKILKQETGCDIKVMEGVSDSEDRVIVISGLAHPDDRI 383
Query: 368 SMAVEAVLLLQTKIN---DEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRI 424
S +AV+ +QT+I + + RLLVSS IGC++GK G+I++E+RK + A +RI
Sbjct: 384 SAPQDAVIRVQTRIAMAISNKEKAIIARLLVSSNQIGCLLGKGGAIMSEMRKSSGAYIRI 443
Query: 425 SKGDK-PKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYS 483
D+ P CA ++ +V++ GE V++AL+QI RLR ++ S DH+ +
Sbjct: 444 LGKDQIPNCASESEGVVQINGEFEVVKEALLQITTRLRHHFFQNLFPS------MDHLSN 497
Query: 484 SGTGISMPPLLPSI------PPV-------GPLG---------YDQRADSGSGI---GM- 517
+PP P + PP G +G +D I GM
Sbjct: 498 PAFLDQVPPFPPYMGRKELSPPFHSFPNFDGMVGAPPHVSFPPHDDHPPFMHNIHRPGMP 557
Query: 518 --LSSSSLYGYGSLSMGDSPYGSMSSYSSKL------YGGLPPP-----LTLEVLVPANA 564
++ +G G P G + ++ +GG+ P T+EV+VP
Sbjct: 558 PHIAERKPWGPQGFVEGGGPMG-LPDFAGPPQRRISGFGGVSHPAIITSTTIEVIVPRTI 616
Query: 565 VGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFIMA 623
V + G+ G+ L IR+IS A I +++ K + V +ISGTPEQ AA++LIQAF+M+
Sbjct: 617 VPVIYGEDGACLKQIRQISDAKITINEPKPGASETVIIISGTPEQTHAAQSLIQAFVMS 675
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 102/361 (28%), Positives = 156/361 (43%), Gaps = 93/361 (25%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTA-------- 359
+V R+LCP KIG V G+GG I IRQ +GA++ V++ DE +I +T
Sbjct: 45 VVFRILCPAPKIGTVTGEGGAVISQIRQETGAKVIVEENIPGCDEQIIVITGSDEKTEVS 104
Query: 360 -----------------------------------IESPDDIK--SMAVEAVLLLQTKI- 381
+E +K S +A+LL+ K+
Sbjct: 105 IEQSKKDGDEEANVAEESDNKNDGNEKEEEKEGVPVEDSGTVKETSSMQKALLLVSGKMF 164
Query: 382 --------NDEDDD---TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDK- 429
DE+++ T +RLLV S +GC++GK GS+I ++ + A +RIS D+
Sbjct: 165 EADPVTDGGDEENNKPSTFILRLLVLSSQVGCLLGKGGSVIKQMSAESGAQIRISPRDRL 224
Query: 430 PKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSGTGIS 489
P C+ +DELVE+ GE+ +VR AL + +L ++ +D D P S +G S
Sbjct: 225 PICSSVSDELVEITGEIDAVRKALQSVSKQLLENPPRDHDSF---PANPSGTSSHSSGHS 281
Query: 490 MPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYG--SMSSYSSKLY 547
P P Y QR S G G PY S + S +
Sbjct: 282 HP---------RPEAYLQR------------HSFSGRG------KPYAVRSRDRHESVIQ 314
Query: 548 GGLPP---PLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALIS 604
+ P LT +L VG VIGK G+ + +++ +G I++ + S DRV +IS
Sbjct: 315 DQMKPVPDVLTFRLLCHNERVGGVIGKGGTIIKILKQETGCDIKVMEGVSDSEDRVIVIS 374
Query: 605 G 605
G
Sbjct: 375 G 375
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 94/376 (25%), Positives = 162/376 (43%), Gaps = 61/376 (16%)
Query: 37 VIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTI--YSHVKDKE 94
+ +R+LC + +G VIGK G +I ++QET +KV++ ++DRV+ I +H D+
Sbjct: 324 LTFRLLCHNERVGGVIGKGGTIIKILKQETGCDIKVMEGVSDSEDRVIVISGLAHPDDR- 382
Query: 95 DVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKE-ECQILVPSSQSAN 153
+ A QDA+++V IA A++N KEK ++LV S+Q
Sbjct: 383 -------------ISAPQDAVIRVQTRIAMAISN--------KEKAIIARLLVSSNQIGC 421
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISA 213
++GK GA + +R + I++ KD +CA E + V I+GE E VK+AL I+
Sbjct: 422 LLGKGGAIMSEMRKSSGAYIRILGKDQ---IPNCASESEGVVQINGEFEVVKEALLQITT 478
Query: 214 IMYK------FSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPIL-------- 259
+ F + + + + PP + PP +PN D ++
Sbjct: 479 RLRHHFFQNLFPSMDHLSNPAFLDQVPPFPPYMGRKELSPPFHSFPNFDGMVGAPPHVSF 538
Query: 260 -PSRSVPSILGAARVPDL------------QGYADTGNTW--PVYS-TGLSLVSGLVGAS 303
P P + P + QG+ + G P ++ +SG G S
Sbjct: 539 PPHDDHPPFMHNIHRPGMPPHIAERKPWGPQGFVEGGGPMGLPDFAGPPQRRISGFGGVS 598
Query: 304 QS---EELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAI 360
I V+ P + + G+ G +K IRQ S A+I +++ K E VI ++
Sbjct: 599 HPAIITSTTIEVIVPRTIVPVIYGEDGACLKQIRQISDAKITINEPKPGASETVIIISGT 658
Query: 361 ESPDDIKSMAVEAVLL 376
++A ++
Sbjct: 659 PEQTHAAQSLIQAFVM 674
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 127/258 (49%), Gaps = 45/258 (17%)
Query: 6 KRYRSQRDNDRDGKNQKRRI---NEKDE--KGNEESVIYRILCPDGVIGSVIGKSGKVIN 60
KR + + +GK +++ N ++ K + +V++RILCP IG+V G+ G VI+
Sbjct: 9 KRLHDSKSTETNGKGKRQNTAGTNSPNQPLKSSPAAVVFRILCPAPKIGTVTGEGGAVIS 68
Query: 61 SIRQETRARVKVVDPFPGAKDRVVTIY--------------------SHVKDKED----- 95
IRQET A+V V + PG ++++ I ++V ++ D
Sbjct: 69 QIRQETGAKVIVEENIPGCDEQIIVITGSDEKTEVSIEQSKKDGDEEANVAEESDNKNDG 128
Query: 96 ---------VEVDDEFNDKEPLCAAQDALLKVHAAI--ANAVANATDNDKKRKEKEECQI 144
V V+D KE + Q ALL V + A+ V + D + + ++
Sbjct: 129 NEKEEEKEGVPVEDSGTVKE-TSSMQKALLLVSGKMFEADPVTDGGDEENNKPSTFILRL 187
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAV 204
LV SSQ ++GK G+ IK++ +++ I+++P+D C+ D V I+GE +AV
Sbjct: 188 LVLSSQVGCLLGKGGSVIKQMSAESGAQIRISPRDR---LPICSSVSDELVEITGEIDAV 244
Query: 205 KKALFAISAIMYKFSPRE 222
+KAL ++S + + PR+
Sbjct: 245 RKALQSVSKQLLENPPRD 262
>gi|110224788|emb|CAL07994.1| putative nucleic acid binding protein [Platanus x acerifolia]
Length = 288
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 108/295 (36%), Positives = 159/295 (53%), Gaps = 36/295 (12%)
Query: 192 DNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGL 251
D + I+GE+ VKKAL+ IS ++ R L + + A S GG
Sbjct: 1 DELLQITGEASVVKKALYQISTRLHDNPSRSQHLLTSAMSNAHQS------------GGS 48
Query: 252 YPNADPILPSRSVPSILGAARVPDLQGY-ADTGNTWP--VYSTGLSLVSGLVGASQSEEL 308
P+ P + A + GY DTG+ WP Y VS ++E
Sbjct: 49 LTG-----PNAGAPIVGLAPLMGPYGGYKGDTGSEWPNAFYPAPRDSVS-------AKEF 96
Query: 309 VIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKS 368
+R++CP IG VIGKGG IK IRQ SGA I VD + D+C+I++++ E +D S
Sbjct: 97 SLRLVCPTGNIGGVIGKGGSVIKQIRQESGAFIKVDSSAAEADDCIISISSKEFFEDPIS 156
Query: 369 MAVEAVLLLQTKINDED-----DDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVR 423
++A + LQ K +++ D T T RLLV + IGC+IGK GSII+E+RK TKA++R
Sbjct: 157 PTIDAAVRLQPKCSEKSDRESGDSTFTTRLLVPTSRIGCLIGKGGSIISEMRKVTKANIR 216
Query: 424 I-SKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDG--SRNPP 475
I SK + PK A +DE+V++ G++ R+AL+Q+ RL+ + +R+G S PP
Sbjct: 217 ILSKENLPKVASEDDEMVQITGDLDVARNALIQVTTRLKTNFF-EREGALSAFPP 270
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 91/185 (49%), Gaps = 23/185 (12%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVD 99
R++CP G IG VIGK G VI IRQE+ A +KV A D +++I S KE E
Sbjct: 99 RLVCPTGNIGGVIGKGGSVIKQIRQESGAFIKVDSSAAEADDCIISISS----KEFFE-- 152
Query: 100 DEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKE-ECQILVPSSQSANIIGKA 158
+P+ DA +++ + +D++ + ++LVP+S+ +IGK
Sbjct: 153 ------DPISPTIDAAVRLQPKCSE------KSDRESGDSTFTTRLLVPTSRIGCLIGKG 200
Query: 159 GATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISA-IMYK 217
G+ I +R T+ +I++ K E A E D V I+G+ + + AL ++ +
Sbjct: 201 GSIISEMRKVTKANIRILSK---ENLPKVASEDDEMVQITGDLDVARNALIQVTTRLKTN 257
Query: 218 FSPRE 222
F RE
Sbjct: 258 FFERE 262
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 79/172 (45%), Gaps = 30/172 (17%)
Query: 437 DELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSGTGISMP----P 492
DEL+++ GE V+ AL QI RL D+ + + + + + SG ++ P P
Sbjct: 1 DELLQITGEASVVKKALYQISTRLHDNPSRSQHLLTS---AMSNAHQSGGSLTGPNAGAP 57
Query: 493 LLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPP 552
++ P +GP G + D+GS ++ Y +P S+S+
Sbjct: 58 IVGLAPLMGPYG-GYKGDTGSEW----PNAFY--------PAPRDSVSAKE--------- 95
Query: 553 PLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALIS 604
+L ++ P +G VIGK GS + IR+ SGA I++ S + D + IS
Sbjct: 96 -FSLRLVCPTGNIGGVIGKGGSVIKQIRQESGAFIKVDSSAAEADDCIISIS 146
>gi|449531366|ref|XP_004172657.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 86
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 73/86 (84%), Positives = 80/86 (93%)
Query: 539 MSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGD 598
MSSYSSKLYGGLPPP +LE+L+PANA GKVIGK G+N+ANIRKISGA IE+SDSKSSRGD
Sbjct: 1 MSSYSSKLYGGLPPPSSLEMLIPANAAGKVIGKGGANIANIRKISGALIEISDSKSSRGD 60
Query: 599 RVALISGTPEQKRAAENLIQAFIMAT 624
R+ALISGT EQKR AENLIQAFIMAT
Sbjct: 61 RIALISGTSEQKRTAENLIQAFIMAT 86
Score = 46.6 bits (109), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSM 369
+ +L P N G+VIGKGG I +IR+ SGA I++ D+K +R + + ++
Sbjct: 18 LEMLIPANAAGKVIGKGGANIANIRKISGALIEISDSKSSRGDRIALISGTSEQKRTAEN 77
Query: 370 AVEAVLL 376
++A ++
Sbjct: 78 LIQAFIM 84
>gi|297596401|ref|NP_001042525.2| Os01g0235800 [Oryza sativa Japonica Group]
gi|56783855|dbj|BAD81267.1| HEN4 -like [Oryza sativa Japonica Group]
gi|255673037|dbj|BAF04439.2| Os01g0235800 [Oryza sativa Japonica Group]
Length = 449
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 142/458 (31%), Positives = 224/458 (48%), Gaps = 53/458 (11%)
Query: 187 CAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIY 246
CA+ D I+GE ++V+K L ++ +++ P+E L + S DV
Sbjct: 19 CALPRDELCQITGELDSVRKGLNTVAQLLFTHPPKESDVLGAHNSGSSRSFFNQPDV--L 76
Query: 247 PPGGLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSE 306
PP G+ PN LP + P++ A +P+ G+ G+ E
Sbjct: 77 PP-GMQPNLH--LPFQG-PNV---AHLPNFPEALMHGH----------------GSVPPE 113
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
L R+LC +K+G +IGKGG IKSI+ +G +I V DT ++ ++ ++ P D
Sbjct: 114 PLTFRLLCSSDKVGGIIGKGGNNIKSIQNDTGCEIKVLDTVPKSEDRIVFISGPAHPGDG 173
Query: 367 KSMAVEAVLLLQTKI---NDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVR 423
S A A+L +Q KI ++ + RL+VS +GC++GK GSII E+RK + A +
Sbjct: 174 ISPAQNAILHVQRKIVPTSNTKEGPAICRLIVSPNQVGCLLGKGGSIIAEMRKLSGAHII 233
Query: 424 ISKGDK-PKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSR----NPPVG- 477
+ DK PK NDE+V++ G ++++AL+QI RLR+ +DR S PP G
Sbjct: 234 VLSKDKIPKGVPENDEVVQISGASEAIQEALMQITARLRNHLFRDRMASTVPNVQPPFGL 293
Query: 478 ADHIYSSGTG----ISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGD 533
D + S G IS P + P++P + D S + + G +S+ D
Sbjct: 294 VDPQFGSYAGNHDSIS-PRIFPNVPQFHKDFIGRPLDEMSAPWTMKGMQVVG-DPISLPD 351
Query: 534 SPYGSMSSYSSKLYGGLPPP--------LTLEVLVPANAVGKVIGKAGSNLANIRKISGA 585
P + + GG P P +T +V+VP + + G+ G L IR+ SGA
Sbjct: 352 IP-----GMAHRGMGGFPGPGQPSIVSTITADVMVPKLVLPSLCGEDGGCLNRIREFSGA 406
Query: 586 TIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFIMA 623
I ++D + D LISGTP+Q AA +LIQAF+++
Sbjct: 407 KITVADPMGNAMDTAILISGTPDQMHAARSLIQAFVLS 444
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 147/355 (41%), Gaps = 55/355 (15%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKE 94
E + +R+LC +G +IGK G I SI+ +T +KV+D P ++DR+V I +
Sbjct: 113 EPLTFRLLCSSDKVGGIIGKGGNNIKSIQNDTGCEIKVLDTVPKSEDRIVFISGPAHPGD 172
Query: 95 DVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANI 154
+ AQ+A+L V I T N K+ C+++V +Q +
Sbjct: 173 GIS------------PAQNAILHVQRKIV-----PTSNTKEGPAI--CRLIVSPNQVGCL 213
Query: 155 IGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAI 214
+GK G+ I +R + I V KD E D V ISG SEA+++AL I+A
Sbjct: 214 LGKGGSIIAEMRKLSGAHIIVLSKDK---IPKGVPENDEVVQISGASEAIQEALMQITAR 270
Query: 215 MYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGG------LYPNADPI--------LP 260
+ R+ + T PP ++ Y ++PN L
Sbjct: 271 LRNHLFRDRM-ASTVPNVQPPFGLVDPQFGSYAGNHDSISPRIFPNVPQFHKDFIGRPLD 329
Query: 261 SRSVPSILGAARV-------PDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVL 313
S P + +V PD+ G A G S+VS + +LV+ L
Sbjct: 330 EMSAPWTMKGMQVVGDPISLPDIPGMAHRGMGGFPGPGQPSIVSTITADVMVPKLVLPSL 389
Query: 314 CPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKS 368
C G+ GG + IR+ SGA+I V D N + I ++ +PD + +
Sbjct: 390 C---------GEDGGCLNRIREFSGAKITVADPMGNAMDTAILISG--TPDQMHA 433
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 88/187 (47%), Gaps = 28/187 (14%)
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGAD 479
++R+SK P CA DEL ++ GE+ SVR L + L K+ D +GA
Sbjct: 7 CEIRVSKDKLPLCALPRDELCQITGELDSVRKGLNTVAQLLFTHPPKESDV-----LGAH 61
Query: 480 HIYSSGTGISMPPLLPSIPPVGP-LGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGS 538
+ SS + + P +LP P + P L + + + + + ++G+GS+
Sbjct: 62 NSGSSRSFFNQPDVLP--PGMQPNLHLPFQGPNVAHLPNFPEALMHGHGSVP-------- 111
Query: 539 MSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGD 598
P PLT +L ++ VG +IGK G+N+ +I+ +G I++ D+ D
Sbjct: 112 ------------PEPLTFRLLCSSDKVGGIIGKGGNNIKSIQNDTGCEIKVLDTVPKSED 159
Query: 599 RVALISG 605
R+ ISG
Sbjct: 160 RIVFISG 166
>gi|356522258|ref|XP_003529764.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 559
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 109/364 (29%), Positives = 183/364 (50%), Gaps = 47/364 (12%)
Query: 306 EELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDD 365
E++V ++LC K+G +IGKGG +++++ +GA I + + + DE V+ ++A E+ +
Sbjct: 192 EDVVFKLLCHHEKVGSLIGKGGSVVRALQNETGASIQIVEAGPDSDERVVVISARETSEQ 251
Query: 366 IKSMAVEAVLLLQ---TKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADV 422
S A EAV+ + T+I E V +LLV S +GC++GK G +I+E+R+ T A +
Sbjct: 252 KHSPAQEAVIRVHCRLTEIGFEPSAAVVAKLLVRSPQVGCLLGKGGLVISEMRRVTGASI 311
Query: 423 RISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRD--GSRNPPVGA-- 478
RI ++ K N+E+V+V+G + SV+DAL I R+R+ R PP
Sbjct: 312 RIFSKEQIKYISQNEEVVQVIGSLQSVQDALFHITSRIRETIFPIRTPPNFSAPPHLPPF 371
Query: 479 -----------DHIYSSGT----GISMPPLLPSIPPVGPLGYDQRA---DSGSGI----- 515
+H+ SSG + P ++PP+ P+ + Q A G G
Sbjct: 372 PEMPPPLFRPRNHLMSSGHPPPPQVGHPHDHSTVPPM-PVDHQQHAFVHGMGRGPPNMDR 430
Query: 516 -----GMLSSSSLYGYGSLSM------GDSPYGSMSSYSSKLYGG-----LPPPLTLEVL 559
G +S + L++ G + S++S + L P LT+E+
Sbjct: 431 VPYPRGYEGPNSPRSWNPLAVNRGNSGGTADTSSLASRNENLGENGNPLQNPNNLTIEIT 490
Query: 560 VPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQA 619
+P + V G+ SNL IR+ SGA + + D K + + ++SG P+Q AA++LIQA
Sbjct: 491 IPHMYLTHVYGENNSNLTQIRQTSGANVVVHDPKPGATEGLVIVSGAPDQTHAAQSLIQA 550
Query: 620 FIMA 623
FI+
Sbjct: 551 FILC 554
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 92/396 (23%), Positives = 164/396 (41%), Gaps = 76/396 (19%)
Query: 34 EESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDK 93
EE V++++LC +GS+IGK G V+ +++ ET A +++V+ P + +RVV I + +
Sbjct: 191 EEDVVFKLLCHHEKVGSLIGKGGSVVRALQNETGASIQIVEAGPDSDERVVVISA----R 246
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
E E + AQ+A+++VH + T+ + ++LV S Q
Sbjct: 247 ETSE--------QKHSPAQEAVIRVHCRL-------TEIGFEPSAAVVAKLLVRSPQVGC 291
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISA 213
++GK G I +R T SI++ K+ + + + V + G ++V+ ALF I++
Sbjct: 292 LLGKGGLVISEMRRVTGASIRIFSKEQIK----YISQNEEVVQVIGSLQSVQDALFHITS 347
Query: 214 IMYK----------FS-----------------PREDIPLETTVREAPPSIIIPSDVPIY 246
+ + FS PR L ++ PP + P D
Sbjct: 348 RIRETIFPIRTPPNFSAPPHLPPFPEMPPPLFRPRNH--LMSSGHPPPPQVGHPHDHSTV 405
Query: 247 PPGGLYPNADPILP--SRSVPSILGAARVPDLQGYA--DTGNTW-PVY-----STGLSLV 296
PP + + R P++ RVP +GY ++ +W P+ S G +
Sbjct: 406 PPMPVDHQQHAFVHGMGRGPPNM---DRVPYPRGYEGPNSPRSWNPLAVNRGNSGGTADT 462
Query: 297 SGLVGASQS-----------EELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDD 345
S L +++ L I + P + V G+ + IRQ SGA + V D
Sbjct: 463 SSLASRNENLGENGNPLQNPNNLTIEITIPHMYLTHVYGENNSNLTQIRQTSGANVVVHD 522
Query: 346 TKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKI 381
K E ++ V+ ++A +L I
Sbjct: 523 PKPGATEGLVIVSGAPDQTHAAQSLIQAFILCGQTI 558
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 137/322 (42%), Gaps = 79/322 (24%)
Query: 309 VIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKS 368
V R++CP K V GG GA+I V+D + +E V+ + ES +
Sbjct: 20 VFRIVCPAAKTEDVATIGG---------DGAKILVEDLV-SAEERVVVIVGEES-----A 64
Query: 369 MAVEAVLLLQTKINDE-DDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKG 427
V V + + +++E + TV+ +L+ S +GC++G+ G I+ +IR+ T A +R+
Sbjct: 65 AQVALVRVFERTVDEETKNSTVSCKLVAPSYQVGCVLGRGGKIVEKIRQDTGAHIRVLPK 124
Query: 428 DK-PKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSGT 486
D+ P +E +++ G G+V+ A++ + D+ +SG
Sbjct: 125 DQPPLPPPPGEEFIQITGNFGAVKKAVLSVSACFYDN-------------------NSGA 165
Query: 487 GISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKL 546
PL + R G S S G S S ++
Sbjct: 166 -------------FKPLDHHSR----------------GCYSESAGHS--------SHRM 188
Query: 547 YGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISG- 605
+ L + ++L VG +IGK GS + ++ +GA+I++ ++ +RV +IS
Sbjct: 189 F--LEEDVVFKLLCHHEKVGSLIGKGGSVVRALQNETGASIQIVEAGPDSDERVVVISAR 246
Query: 606 -TPEQKR--AAENLIQAFIMAT 624
T EQK A E +I+ T
Sbjct: 247 ETSEQKHSPAQEAVIRVHCRLT 268
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 91/391 (23%), Positives = 156/391 (39%), Gaps = 95/391 (24%)
Query: 38 IYRILCPDGVIGSV--IGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKED 95
++RI+CP V IG G I +V+ A++RVV I
Sbjct: 20 VFRIVCPAAKTEDVATIGGDGAKI------------LVEDLVSAEERVVVI--------- 58
Query: 96 VEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANII 155
V +E AAQ AL++V T +++ + C+++ PS Q ++
Sbjct: 59 --VGEE-------SAAQVALVRV--------FERTVDEETKNSTVSCKLVAPSYQVGCVL 101
Query: 156 GKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIM 215
G+ G ++++R T I+V PKD E F+ I+G AVKKA+ ++SA
Sbjct: 102 GRGGKIVEKIRQDTGAHIRVLPKDQPPLPPPPGEE---FIQITGNFGAVKKAVLSVSACF 158
Query: 216 YKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPIL----PSRSVPSIL--G 269
Y + PL+ R S+ + ++ D + V S++ G
Sbjct: 159 YDNNSGAFKPLDHHSRGC------YSESAGHSSHRMFLEEDVVFKLLCHHEKVGSLIGKG 212
Query: 270 AARVPDLQGYADTGNTWPVYSTG------LSLVSGLVGASQ----SEELVIRVLCPFNKI 319
+ V LQ +TG + + G + ++S + Q ++E VIRV C +I
Sbjct: 213 GSVVRALQN--ETGASIQIVEAGPDSDERVVVISARETSEQKHSPAQEAVIRVHCRLTEI 270
Query: 320 GR-------------------VIGKGGGTIKSIRQASGAQIDVDDTKD-----NRDECVI 355
G ++GKGG I +R+ +GA I + + +E V
Sbjct: 271 GFEPSAAVVAKLLVRSPQVGCLLGKGGLVISEMRRVTGASIRIFSKEQIKYISQNEEVVQ 330
Query: 356 TVTAIESPDD----IKSMAVEAVLLLQTKIN 382
+ +++S D I S E + ++T N
Sbjct: 331 VIGSLQSVQDALFHITSRIRETIFPIRTPPN 361
Score = 43.1 bits (100), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 87/201 (43%), Gaps = 47/201 (23%)
Query: 24 RINEK--DEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKD 81
R+ E+ DE+ +V +++ P +G V+G+ GK++ IRQ+T A ++V+ KD
Sbjct: 71 RVFERTVDEETKNSTVSCKLVAPSYQVGCVLGRGGKIVEKIRQDTGAHIRVL-----PKD 125
Query: 82 RVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIAN---------------AV 126
+ +E +++ F A + A+L V A +
Sbjct: 126 QPPLPPP--PGEEFIQITGNFG------AVKKAVLSVSACFYDNNSGAFKPLDHHSRGCY 177
Query: 127 ANATDNDKKRKEKEE---CQILVPSSQSANIIGKAGATIKRLRSKTRTSIK--------- 174
+ + + R EE ++L + ++IGK G+ ++ L+++T SI+
Sbjct: 178 SESAGHSSHRMFLEEDVVFKLLCHHEKVGSLIGKGGSVVRALQNETGASIQIVEAGPDSD 237
Query: 175 -----VTPKDASEPTHSCAME 190
++ ++ SE HS A E
Sbjct: 238 ERVVVISARETSEQKHSPAQE 258
>gi|147827313|emb|CAN73147.1| hypothetical protein VITISV_020391 [Vitis vinifera]
Length = 974
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 71/113 (62%), Positives = 88/113 (77%), Gaps = 1/113 (0%)
Query: 186 SCAMEFDN-FVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVP 244
SC + + F+ G + +KALFAISAIMYKF+PRE+IPL+TTV EAPPSIIIPSDVP
Sbjct: 741 SCGAQIAHGFIGKLGLNSETQKALFAISAIMYKFTPREEIPLDTTVPEAPPSIIIPSDVP 800
Query: 245 IYPPGGLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVS 297
IYP G YP+AD I+ +RSVP IL A VP+L+GY+D G+TWPVYS+ L +VS
Sbjct: 801 IYPAGRFYPSADSIVSARSVPPILAATHVPELRGYSDMGSTWPVYSSNLPVVS 853
>gi|384253488|gb|EIE26963.1| hypothetical protein COCSUDRAFT_59455 [Coccomyxa subellipsoidea
C-169]
Length = 648
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 176/651 (27%), Positives = 278/651 (42%), Gaps = 112/651 (17%)
Query: 37 VIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDV 96
V YR+LCP IG+VIGK G VI +R T AR+KV G +R++++ S D+
Sbjct: 31 VEYRLLCPATRIGTVIGKGGSVIQQMRDSTGARIKVEPEVAGCSERLISLSS--SDEPGA 88
Query: 97 EVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEEC---QILVPSSQSAN 153
E LC AQ+AL V + ++ A A D C ++LV +Q
Sbjct: 89 E----------LCRAQEALFAVQSRLSEADAAQEDT---------CCVVRMLVEQAQVGC 129
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISA 213
++GK G I LR +T +I+V+ K +CA D+ V + GE++AV AL +SA
Sbjct: 130 VLGKGGEVISDLRRRTGANIRVSDK---RDLPACAGSEDSLVAVKGEAQAVSDALRQLSA 186
Query: 214 IMYKFSPRE----DIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILG 269
++ S R+ P+ + + + P P +P+L + P
Sbjct: 187 LLRTHSQRKPQQARAPMTFNITAVATAAVQPEQAQHR----RQPMREPVLAPIARPH--- 239
Query: 270 AARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGT 329
N P ++ + AS E+ +R+L P IG VIG+ G
Sbjct: 240 -----------QCHNCLPDAHAMQPRMTAVQEASAVVEVQLRLLVPATHIGCVIGRRGEM 288
Query: 330 IKSIRQASGAQIDVDD-----------TKDNRDECVITVTAIESPDDIKSMAVEAVLLLQ 378
I++IR +GA I V + K D VITV A E+ S EAV L+
Sbjct: 289 IRTIRDDTGAHIKVHEGSQGARAFPPSEKKGVDR-VITVAAAEAAGAAVSPTEEAVCLMA 347
Query: 379 TKINDEDD--DTVTIRLLV-----------SSKVIGCIIGKSGSIINEIRKRTKADVRI- 424
+ IR+LV S +G ++GK G+ I ++RK + A VR+
Sbjct: 348 LCLLGPSGLPPVPCIRILVPTPQGGTAEALSLLQVGGVLGKGGATITQVRKDSGAGVRLV 407
Query: 425 ---SKGDK--PK--CADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVG 477
++ D+ P+ A ++V++ G + + A+ + +LR A + R P
Sbjct: 408 PLEAEDDRWLPRDVAAGQMHKVVQIEGPITATVKAVRAVCAQLR--AWQARSQGAQP--- 462
Query: 478 ADHIYSSGTGISMP--------PLLPSIPPVGPLGYDQRADSGSGIGMLSSS-------- 521
A + + G P +LP G G S + +GM S
Sbjct: 463 ARELTEAYGGAHAPQQFHPMHQAMLPRETAPGLRGRGLPDLSRAEMGMYDSPLRHCERPV 522
Query: 522 ---------SLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKA 572
+ G + S M + ++ + E+ + VG V+GKA
Sbjct: 523 LQLRHPLDLQVLSRGQMDRAMSQPLMMQQVTQQVVTAPDQTQSCELRLVGVQVGCVLGKA 582
Query: 573 GSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFIMA 623
G N+ IRKISGA +++SD+ +R+ +SGT EQ +AA NL+QAF++A
Sbjct: 583 GENITQIRKISGARVKLSDAPRGVTERLLRLSGTCEQVQAAVNLVQAFLLA 633
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 114/192 (59%), Gaps = 6/192 (3%)
Query: 289 YSTGLSLVSGLVGASQSEELV-IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTK 347
+S + + +G+V S + +V R+LCP +IG VIGKGG I+ +R ++GA+I V+
Sbjct: 11 HSDDVQMEAGVVKRSAAGAMVEYRLLCPATRIGTVIGKGGSVIQQMRDSTGARIKVEPEV 70
Query: 348 DNRDECVITVTAIESPDDIKSMAVEAVLLLQTKINDED----DDTVTIRLLVSSKVIGCI 403
E +I++++ + P A EA+ +Q+++++ D D +R+LV +GC+
Sbjct: 71 AGCSERLISLSSSDEPGAELCRAQEALFAVQSRLSEADAAQEDTCCVVRMLVEQAQVGCV 130
Query: 404 IGKSGSIINEIRKRTKADVRIS-KGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRD 462
+GK G +I+++R+RT A++R+S K D P CA + D LV V GE +V DAL Q+ LR
Sbjct: 131 LGKGGEVISDLRRRTGANIRVSDKRDLPACAGSEDSLVAVKGEAQAVSDALRQLSALLRT 190
Query: 463 DALKDRDGSRNP 474
+ + +R P
Sbjct: 191 HSQRKPQQARAP 202
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 89/383 (23%), Positives = 148/383 (38%), Gaps = 82/383 (21%)
Query: 17 DGKNQKRRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPF 76
D + R+ E V R+L P IG VIG+ G++I +IR +T A +KV +
Sbjct: 247 DAHAMQPRMTAVQEASAVVEVQLRLLVPATHIGCVIGRRGEMIRTIRDDTGAHIKVHEGS 306
Query: 77 PGAK----------DRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAV 126
GA+ DRV+T+ + V +E LC + L I
Sbjct: 307 QGARAFPPSEKKGVDRVITVAAAEAAGAAVSPTEEAVCLMALCLLGPSGLPPVPCI---- 362
Query: 127 ANATDNDKKRKEKEECQILVPSSQSAN-----------IIGKAGATIKRLRSKTRTSIKV 175
+ILVP+ Q ++GK GATI ++R + +++
Sbjct: 363 ----------------RILVPTPQGGTAEALSLLQVGGVLGKGGATITQVRKDSGAGVRL 406
Query: 176 TPKDASE----PTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVR 231
P +A + P A + V I G A KA+ A+ A + + R
Sbjct: 407 VPLEAEDDRWLPRDVAAGQMHKVVQIEGPITATVKAVRAVCAQLRAWQARSQ-------G 459
Query: 232 EAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDL----QGYADT---GN 284
P + + + P +P +LP + P + G +PDL G D+
Sbjct: 460 AQPARELTEAYGGAHAPQQFHPMHQAMLPRETAPGLRGRG-LPDLSRAEMGMYDSPLRHC 518
Query: 285 TWPV----YSTGLSLVS-GLVGASQSEELVIRVL-------------CPFN----KIGRV 322
PV + L ++S G + + S+ L+++ + C ++G V
Sbjct: 519 ERPVLQLRHPLDLQVLSRGQMDRAMSQPLMMQQVTQQVVTAPDQTQSCELRLVGVQVGCV 578
Query: 323 IGKGGGTIKSIRQASGAQIDVDD 345
+GK G I IR+ SGA++ + D
Sbjct: 579 LGKAGENITQIRKISGARVKLSD 601
Score = 40.0 bits (92), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 40/200 (20%), Positives = 75/200 (37%), Gaps = 48/200 (24%)
Query: 24 RINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVD-----PFPG 78
R++E D + + R+L +G V+GK G+VI+ +R+ T A ++V D G
Sbjct: 103 RLSEADAAQEDTCCVVRMLVEQAQVGCVLGKGGEVISDLRRRTGANIRVSDKRDLPACAG 162
Query: 79 AKDRVVTIYSHVKDKEDV-----EVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDND 133
++D +V + + D + + ++P A + A AV
Sbjct: 163 SEDSLVAVKGEAQAVSDALRQLSALLRTHSQRKPQQARAPMTFNITAVATAAVQPEQAQH 222
Query: 134 KKRKEKE----------ECQ----------------------------ILVPSSQSANII 155
+++ +E +C +LVP++ +I
Sbjct: 223 RRQPMREPVLAPIARPHQCHNCLPDAHAMQPRMTAVQEASAVVEVQLRLLVPATHIGCVI 282
Query: 156 GKAGATIKRLRSKTRTSIKV 175
G+ G I+ +R T IKV
Sbjct: 283 GRRGEMIRTIRDDTGAHIKV 302
>gi|147820986|emb|CAN61372.1| hypothetical protein VITISV_038086 [Vitis vinifera]
Length = 515
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/121 (60%), Positives = 90/121 (74%), Gaps = 2/121 (1%)
Query: 186 SCAMEFDN-FVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVP 244
SC E + F+ G + +KAL AISAIMYKF+ RE+IPL+TT+ EAPPSIIIPSDV
Sbjct: 386 SCGAEIAHGFIAKLGLNSETQKALLAISAIMYKFTLREEIPLDTTIPEAPPSIIIPSDVS 445
Query: 245 IYPPGGLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQ 304
IYP G YP+AD I+ +R VPS+L A VP+LQGY+D G+TWPVYS L +VSG GAS+
Sbjct: 446 IYPSSGFYPSADSIVSTRFVPSVLAATHVPELQGYSDMGSTWPVYSFNLPVVSG-YGASR 504
Query: 305 S 305
S
Sbjct: 505 S 505
>gi|413953982|gb|AFW86631.1| hypothetical protein ZEAMMB73_253509 [Zea mays]
Length = 581
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 124/452 (27%), Positives = 211/452 (46%), Gaps = 55/452 (12%)
Query: 39 YRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEV 98
+RILCP+ G + +R ++ A V V PF G RV+ + + D
Sbjct: 91 FRILCPEC---KAYGFPPGFVAKVRDDSGALVTVHPPFAGDYVRVIETVDGARREAD--- 144
Query: 99 DDEFNDKEPLCA-AQDALLKVHAAIANAVANATD---------NDKKRKEKEECQILVPS 148
+ P+ + AQ+ALL VH I A+ D D + + K +++VP
Sbjct: 145 -----GRPPMFSPAQEALLMVHRRILETDADDGDEDGEYGPRGKDSRDRGKTTTRLIVPK 199
Query: 149 SQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKAL 208
++GK G I+++R +T+T I++ P+D P C + V + G+ VKKA+
Sbjct: 200 MHVGCLLGKGGKIIEQMRMETKTHIRILPRDQHTP--RCVSLSEEVVQVVGDGNCVKKAV 257
Query: 209 FAISAIMYKFSPREDIPLETTVREAPPSI------IIPSDVPIYPPGGLYPNADPILPSR 262
I+ + + R+ P + P I + S +P Y +D I +
Sbjct: 258 AIITDRLKESLHRDRGPFRGRMNSPEPRISQEDDYLGVSQMPAYEES--LGRSDQIRNNT 315
Query: 263 SVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRV 322
S+ + GY N V L ++++ R+LCP +K+ +
Sbjct: 316 SM----------EPPGYEFDSNDGKVIEHPDILY---------DDIIFRILCPNDKVDNL 356
Query: 323 IGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKIN 382
+ G ++ ++ G + + D DE V+ +T+ E PD A EAVL +QT I
Sbjct: 357 VATNDGILEMLQADVGVDVRLSDIIAGSDERVVIITSREGPDHELFPAQEAVLHIQTHIV 416
Query: 383 D---EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRI-SKGDKPKCADANDE 438
D + D+ +T RLLV S I C G+ GS+ ++I+++T A+V+I K D P CA +DE
Sbjct: 417 DLGPDKDNIITTRLLVPSSEIACFDGREGSL-SDIQRQTSANVQILPKEDLPLCALESDE 475
Query: 439 LVEVVGEVGSVRDALVQIILRLRDDALKDRDG 470
L+++VGE+ + R+AL+Q+ +LR ++ G
Sbjct: 476 LIQIVGEISAARNALIQVTTKLRSFLYREMSG 507
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 91/188 (48%), Gaps = 23/188 (12%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKE 94
+ +I+RILCP+ + +++ + ++ ++ + V++ D G+ +RVV I S
Sbjct: 340 DDIIFRILCPNDKVDNLVATNDGILEMLQADVGVDVRLSDIIAGSDERVVIITSR----- 394
Query: 95 DVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANI 154
E D E L AQ+A+L + I + + + R +LVPSS+ A
Sbjct: 395 ------EGPDHE-LFPAQEAVLHIQTHIVDLGPDKDNIITTR-------LLVPSSEIACF 440
Query: 155 IGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAI 214
G+ G ++ ++ +T ++++ PK E CA+E D + I GE A + AL ++
Sbjct: 441 DGREG-SLSDIQRQTSANVQILPK---EDLPLCALESDELIQIVGEISAARNALIQVTTK 496
Query: 215 MYKFSPRE 222
+ F RE
Sbjct: 497 LRSFLYRE 504
>gi|224077694|ref|XP_002305366.1| predicted protein [Populus trichocarpa]
gi|222848330|gb|EEE85877.1| predicted protein [Populus trichocarpa]
Length = 262
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 104/250 (41%), Positives = 138/250 (55%), Gaps = 34/250 (13%)
Query: 305 SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPD 364
S+E +R++CP IG VIGKGG I IRQ SGA I VD + D+C+IT++A E D
Sbjct: 28 SKEFSLRMVCPTANIGAVIGKGGTIINQIRQESGATIKVDSSASEGDDCLITISAKEICD 87
Query: 365 DIKSMAVEAVLLLQTKIND--EDDD---TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
D S +EA L LQ + ++ E D + T RLLV S IGC++GK G II+E+RK TK
Sbjct: 88 DQYSPTIEAALRLQPRCSEKMERDSGLFSFTTRLLVPSSHIGCLLGKGGLIIDEMRKLTK 147
Query: 420 ADVRISKGDK-PKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGA 478
A +RI + DK PK A +DE+V++ G++ +DAL+QI RLR +A DR+G
Sbjct: 148 AIIRIPRKDKLPKTALDDDEMVQISGDLDIAKDALIQISRRLRANAF-DREG-------- 198
Query: 479 DHIYSSGTGISMPPLLPSIP--PVGPLG-----YDQRADSGSGIGMLSSSSLYGYGSLSM 531
M +LP P PV G YD R D G G + YG ++
Sbjct: 199 ----------LMSAILPVFPYLPVSAEGLEGRHYDSRDDKRHGRGNTYAGG-YGASDYAV 247
Query: 532 GDSPYGSMSS 541
GDS YGS S
Sbjct: 248 GDS-YGSYRS 256
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 91/185 (49%), Gaps = 21/185 (11%)
Query: 28 KDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIY 87
+DE ++E + R++CP IG+VIGK G +IN IRQE+ A +KV D ++TI
Sbjct: 23 RDELASKEFSL-RMVCPTANIGAVIGKGGTIINQIRQESGATIKVDSSASEGDDCLITIS 81
Query: 88 SHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVP 147
+ KE DD+++ +A L++ + + + ++LVP
Sbjct: 82 A----KE--ICDDQYS------PTIEAALRLQPRCSEKMERDSG-----LFSFTTRLLVP 124
Query: 148 SSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKA 207
SS ++GK G I +R T+ I++ KD T A++ D V ISG+ + K A
Sbjct: 125 SSHIGCLLGKGGLIIDEMRKLTKAIIRIPRKDKLPKT---ALDDDEMVQISGDLDIAKDA 181
Query: 208 LFAIS 212
L IS
Sbjct: 182 LIQIS 186
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 526 YGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGA 585
YGS GD+ S S YS+ +L ++ P +G VIGK G+ + IR+ SGA
Sbjct: 4 YGSFK-GDTGDWSRSLYSAPRDELASKEFSLRMVCPTANIGAVIGKGGTIINQIRQESGA 62
Query: 586 TIEMSDSKSSRGD 598
TI++ DS +S GD
Sbjct: 63 TIKV-DSSASEGD 74
>gi|388511497|gb|AFK43810.1| unknown [Lotus japonicus]
Length = 279
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/242 (41%), Positives = 131/242 (54%), Gaps = 21/242 (8%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
E +RV+CP IG VIGKGG I IRQ SGA I VD + D+C+I ++ E DD
Sbjct: 13 EFSVRVVCPTGNIGGVIGKGGAIINQIRQDSGATIKVDSSATEGDDCLIAISTKEFFDDS 72
Query: 367 KSMAVEAVLLLQTKIND--EDDD---TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKAD 421
S +EA + LQ + +D E D + T RLLV S IGC+IGK G+II E+R+ TKA+
Sbjct: 73 FSPTIEAAVRLQPRCSDKVERDSGIVSFTTRLLVPSSRIGCLIGKGGTIITEMRRLTKAN 132
Query: 422 VRI-SKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDAL-KDRDGSRNPPVGAD 479
+RI K D PK A +DE+V++ G++ +DALVQ++ RL+ + K+R PV
Sbjct: 133 IRILPKEDLPKIASEDDEMVQISGDLDVAKDALVQVLTRLKANLFDKERAVPGFLPV--- 189
Query: 480 HIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSM 539
MP L S+ L YD R G G SS G L GDS YGS
Sbjct: 190 ----------MPYLPASVDGSDGLNYDSRDGKRHGRGHSYSSGYGGLSDLPPGDS-YGSY 238
Query: 540 SS 541
S
Sbjct: 239 GS 240
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 85/182 (46%), Gaps = 20/182 (10%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH 89
++G+ R++CP G IG VIGK G +IN IRQ++ A +KV D ++ I +
Sbjct: 7 DEGSMREFSVRVVCPTGNIGGVIGKGGAIINQIRQDSGATIKVDSSATEGDDCLIAISTK 66
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSS 149
EF D + +A +++ ++ V + ++LVPSS
Sbjct: 67 -----------EFFD-DSFSPTIEAAVRLQPRCSDKVERDSG-----IVSFTTRLLVPSS 109
Query: 150 QSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALF 209
+ +IGK G I +R T+ +I++ PK E A E D V ISG+ + K AL
Sbjct: 110 RIGCLIGKGGTIITEMRRLTKANIRILPK---EDLPKIASEDDEMVQISGDLDVAKDALV 166
Query: 210 AI 211
+
Sbjct: 167 QV 168
>gi|255583245|ref|XP_002532387.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223527911|gb|EEF29999.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 688
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 120/455 (26%), Positives = 212/455 (46%), Gaps = 57/455 (12%)
Query: 37 VIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDV 96
V +R++C +IG +IG+SG I+ IR++T V + G+ RV+TI + +
Sbjct: 25 VAFRVVCHASIIGGLIGRSGSAISQIRRDTGCTVHCDEQVQGSDHRVITIVGPASPGKRI 84
Query: 97 EVDD---------EFNDKEPLCAAQDALLKVHAAIANAVAN-----ATDNDKKRKEKEE- 141
++ E +KE + AQ+A+++V + DN+ E
Sbjct: 85 TLNSTTCHDHNGAEEEEKELVSVAQEAVIRVCERMWEVDGQRERRGGVDNNSNNSGLGEG 144
Query: 142 -CQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGE 200
C +L ++Q ++GK G + R+R ++ I+ P P H CA + D + I+G
Sbjct: 145 YCGLLADTTQIGAVVGKGGKNVLRMRRESGADIRFLP-----PPH-CASKDDQLIQITGS 198
Query: 201 SEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILP 260
AVKKAL A++ ++ P E P S + SD P +P+ +LP
Sbjct: 199 ILAVKKALVAVTDCLHDCPPYEKDPTLLMRPLERASHLASSD----PHAEFFPHLSSLLP 254
Query: 261 SRSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIG 320
S ++G + P+ S + A + E+ R+LC G
Sbjct: 255 PLS----------------GNSGTSHPLSSDAGEDPNQDAEAVR-HEVSFRLLCSNGAAG 297
Query: 321 RVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTK 380
+IGK G +++++ +GA I E V+T++A+E+ + S A A +L+ +
Sbjct: 298 SIIGKKGTIVRTLQNETGASIMFAAPMSMSGERVVTISALENLESWHSPAQNAAILVFAR 357
Query: 381 INDEDDD-----------TVTIRLLVSSKVIGCII--GKSGSIINEIRKRTKADVRISKG 427
+ D + TVT RLLV+S + C+I G +G+I +E+ + + AD+RI G
Sbjct: 358 SVEHDIEKGHPSGLIEGATVTARLLVASDAVCCLIEKGGTGNIDSEMIEVSGADIRILDG 417
Query: 428 DK-PKCADANDELVEVVGEVGSVRDALVQIILRLR 461
++ CA +D ++E+ GE +V++AL + +LR
Sbjct: 418 EQIMACASEDDVVIEITGEYKNVQNALFMVTGKLR 452
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 86/353 (24%), Positives = 149/353 (42%), Gaps = 73/353 (20%)
Query: 304 QSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESP 363
Q ++ RV+C + IG +IG+ G I IR+ +G + D+ D VIT+ SP
Sbjct: 21 QPGQVAFRVVCHASIIGGLIGRSGSAISQIRRDTGCTVHCDEQVQGSDHRVITIVGPASP 80
Query: 364 ---------------------DDIKSMAVEAVLLLQTKI--------------NDEDDDT 388
++ S+A EAV+ + ++ N+ ++
Sbjct: 81 GKRITLNSTTCHDHNGAEEEEKELVSVAQEAVIRVCERMWEVDGQRERRGGVDNNSNNSG 140
Query: 389 V---TIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGE 445
+ LL + IG ++GK G + +R+ + AD+R P CA +D+L+++ G
Sbjct: 141 LGEGYCGLLADTTQIGAVVGKGGKNVLRMRRESGADIRFLP--PPHCASKDDQLIQITGS 198
Query: 446 VGSVRDALVQIILRLRDDALKDRDGS--RNPPVGADHIYSSGTGISMPPLLPSIPPVGPL 503
+ +V+ ALV + L D ++D + P A H+ SS P L S+ P PL
Sbjct: 199 ILAVKKALVAVTDCLHDCPPYEKDPTLLMRPLERASHLASSDPHAEFFPHLSSLLP--PL 256
Query: 504 GYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPAN 563
+SG+ + S + G+ P + + ++ +L
Sbjct: 257 S----GNSGTSHPLSSDA----------GEDPNQDAEAVRHE--------VSFRLLCSNG 294
Query: 564 AVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENL 616
A G +IGK G+ + ++ +GA+I + S G+RV IS A ENL
Sbjct: 295 AAGSIIGKKGTIVRTLQNETGASIMFAAPMSMSGERVVTIS-------ALENL 340
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 52/68 (76%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAEN 615
+E++VP + +G V G+ GSNLA +R+ISGA +E+ + S + R+ +ISGTP+Q AA++
Sbjct: 619 IELVVPEDTIGSVYGEDGSNLARLRQISGAKVEVREPSSGKSGRIVVISGTPDQTNAAQS 678
Query: 616 LIQAFIMA 623
L+QAFI+A
Sbjct: 679 LLQAFILA 686
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 94/201 (46%), Gaps = 22/201 (10%)
Query: 28 KDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIY 87
+D + V +R+LC +G GS+IGK G ++ +++ ET A + P + +RVVTI
Sbjct: 276 QDAEAVRHEVSFRLLCSNGAAGSIIGKKGTIVRTLQNETGASIMFAAPMSMSGERVVTIS 335
Query: 88 SHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHA-AIANAVANATDNDKKRKEKEECQILV 146
+ E++E + P AQ+A + V A ++ + + + ++LV
Sbjct: 336 A----LENLE-----SWHSP---AQNAAILVFARSVEHDIEKGHPSGLIEGATVTARLLV 383
Query: 147 PSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDA----SEPTHSCAMEFDNFVLISGESE 202
S +I K G + S+ I+V+ D E +CA E D + I+GE +
Sbjct: 384 ASDAVCCLIEKGGT--GNIDSEM---IEVSGADIRILDGEQIMACASEDDVVIEITGEYK 438
Query: 203 AVKKALFAISAIMYKFSPRED 223
V+ ALF ++ + SP D
Sbjct: 439 NVQNALFMVTGKLRGLSPDSD 459
>gi|118485588|gb|ABK94645.1| unknown [Populus trichocarpa]
Length = 294
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 101/267 (37%), Positives = 142/267 (53%), Gaps = 48/267 (17%)
Query: 305 SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPD 364
S+E +RV+CP IG VIGKGG I IRQ SGA I VD + D+C+IT++A E D
Sbjct: 28 SKEFSLRVVCPTANIGAVIGKGGTIINQIRQESGATIKVDSSVAEGDDCLITISAKEIYD 87
Query: 365 DIKSMAVEAVLLLQTKIND--EDDD---TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
S +EA + LQ + ++ E D + T RLLV S IGC++GK G+II+E+RK TK
Sbjct: 88 HY-SPTIEAAVRLQPRCSEKMERDSGLISFTTRLLVPSSRIGCLLGKGGAIIDEMRKLTK 146
Query: 420 ADVRI-SKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGA 478
A +RI K + PK A +DE+V++ G++ +DAL+QI RLR + DR+G+ +
Sbjct: 147 AIIRIPRKENLPKVASDDDEMVQIAGDLDVAKDALIQISRRLRANVF-DREGAMS----- 200
Query: 479 DHIYSSGTGISMPPLLPSIPPVGP----LGYDQR-----------------ADSGSGIGM 517
++ P+LP +P L YD R +D SG G
Sbjct: 201 ----------AILPVLPYLPVSAEGSEGLNYDSRDGKRHGRGSSYAGGYSSSDYASGDGY 250
Query: 518 LSSSSLYGYGSLSMGDSPYGSMSSYSS 544
S YG ++ PYG+ SYSS
Sbjct: 251 GS----YGSSQINASGGPYGAYGSYSS 273
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 91/190 (47%), Gaps = 32/190 (16%)
Query: 28 KDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVT-- 85
+DE ++E + R++CP IG+VIGK G +IN IRQE+ A +KV D ++T
Sbjct: 23 RDELASKEFSL-RVVCPTANIGAVIGKGGTIINQIRQESGATIKVDSSVAEGDDCLITIS 81
Query: 86 ---IYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEEC 142
IY H + V +P C+ + ++ + + +
Sbjct: 82 AKEIYDHYSPTIEAAV-----RLQPRCSEK---MERDSGLISFTT--------------- 118
Query: 143 QILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESE 202
++LVPSS+ ++GK GA I +R T+ I++ P+ + P A + D V I+G+ +
Sbjct: 119 RLLVPSSRIGCLLGKGGAIIDEMRKLTKAIIRI-PRKENLP--KVASDDDEMVQIAGDLD 175
Query: 203 AVKKALFAIS 212
K AL IS
Sbjct: 176 VAKDALIQIS 185
>gi|224097168|ref|XP_002310861.1| predicted protein [Populus trichocarpa]
gi|222853764|gb|EEE91311.1| predicted protein [Populus trichocarpa]
Length = 404
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 111/425 (26%), Positives = 199/425 (46%), Gaps = 67/425 (15%)
Query: 37 VIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDV 96
V +R++C IG++IG SG VI+ IR ET V + G++ R + + + +
Sbjct: 26 VAFRVVCHASKIGALIGHSGSVISQIRLETGCLVHCEEAVKGSEHRAIVVAGSASPERKI 85
Query: 97 EVDDEFNDKEPLCAAQDALLKVHAAI--ANAVANATDNDKKRKEKEECQILVPSSQSANI 154
V + ++ + AAQ+A+++V + +AV + D + C +L +SQ +
Sbjct: 86 AVGE--DETVEVSAAQEAVVRVLERMWEVDAVKDGGDCEGY------CGLLANTSQIGAV 137
Query: 155 IGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESE-AVKKALFAISA 213
+G+ G IKR++ + I + P CA++ D + I+G S AVKKA+ AI++
Sbjct: 138 VGREGRNIKRMKRASGAHIWILPAPL------CALKEDQLIQITGSSTVAVKKAVIAITS 191
Query: 214 IMYKFSPRE----DIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILG 269
+ P E D+ LE R S D P +P+ +LP+
Sbjct: 192 CLQDCPPYEKDEVDLSLEAVRRRRSGS---SGD----PHAEFFPHLCSLLPT-------- 236
Query: 270 AARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGT 329
YS ++ ++ ++ R++CP G +IGKGG
Sbjct: 237 -------------------YSENIATDKDHKKPNEQLQVQFRMICPHGAAGSIIGKGGSV 277
Query: 330 IKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKINDED---- 385
+++++ +GA I + N D ++TV+A+E+ + S A A+LL+ + + D
Sbjct: 278 VRALQNQTGASIILAPPITNSDGRLVTVSALENLESSHSPAQNALLLVFARSIEHDIERA 337
Query: 386 -------DDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDK-PKCADAND 437
+ TVT LL+ S + C+I + G I +E+ + T AD++I +GD+ CA ND
Sbjct: 338 RSLGLIEEITVTATLLLPSNRVSCLIERGGRIDSEMIETTGADIQILQGDQFFYCASNND 397
Query: 438 ELVEV 442
+++V
Sbjct: 398 VVLQV 402
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 83/183 (45%), Gaps = 19/183 (10%)
Query: 304 QSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESP 363
Q ++ RV+C +KIG +IG G I IR +G + ++ + I V SP
Sbjct: 22 QPGQVAFRVVCHASKIGALIGHSGSVISQIRLETGCLVHCEEAVKGSEHRAIVVAGSASP 81
Query: 364 DDI----------KSMAVEAVLLLQTKINDED------DDTVTIRLLVSSKVIGCIIGKS 407
+ S A EAV+ + ++ + D D LL ++ IG ++G+
Sbjct: 82 ERKIAVGEDETVEVSAAQEAVVRVLERMWEVDAVKDGGDCEGYCGLLANTSQIGAVVGRE 141
Query: 408 GSIINEIRKRTKADVRISKGDKPKCADANDELVEVVG-EVGSVRDALVQIILRLRDDALK 466
G I +++ + A + I P CA D+L+++ G +V+ A++ I L+D
Sbjct: 142 GRNIKRMKRASGAHIWILPA--PLCALKEDQLIQITGSSTVAVKKAVIAITSCLQDCPPY 199
Query: 467 DRD 469
++D
Sbjct: 200 EKD 202
>gi|212723602|ref|NP_001132277.1| uncharacterized protein LOC100193713 [Zea mays]
gi|194693942|gb|ACF81055.1| unknown [Zea mays]
Length = 510
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/174 (39%), Positives = 106/174 (60%), Gaps = 3/174 (1%)
Query: 303 SQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDT-KDNRDECVITVTAIE 361
+++EE IR+LC IG VIGK G ++ + Q +GA+I V + KD E +I +++ E
Sbjct: 28 TETEEFSIRILCASELIGSVIGKSGANVRRVEQQTGARIKVQEIDKDASGERLIIISSNE 87
Query: 362 SPDDIKSMAVEAVLLLQTKIN-DEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKA 420
P + S A+EA++LL K++ + + RL+V S +GCIIG+ G +I ++R+RT A
Sbjct: 88 IPAEPISPAIEALILLHDKVSAPSEKHHSSTRLVVPSSKVGCIIGEGGKVITDMRRRTGA 147
Query: 421 DVRI-SKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRN 473
++R+ SK DKPK +DELV+V G R AL +I RLR L+D + N
Sbjct: 148 EIRVYSKADKPKYLSFDDELVQVAGPPTIARGALTEIASRLRTRTLRDTSTANN 201
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 90/183 (49%), Gaps = 27/183 (14%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAK-DRVVTIYSHVKDK 93
E RILC +IGSVIGKSG + + Q+T AR+KV + A +R++ I S+
Sbjct: 31 EEFSIRILCASELIGSVIGKSGANVRRVEQQTGARIKVQEIDKDASGERLIIISSN---- 86
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
E+ EP+ A +AL+ +H ++ K +++VPSS+
Sbjct: 87 ---EI-----PAEPISPAIEALILLHDKVSA---------PSEKHHSSTRLVVPSSKVGC 129
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDN-FVLISGESEAVKKALFAIS 212
IIG+ G I +R +T I+V K A +P + + FD+ V ++G + AL I+
Sbjct: 130 IIGEGGKVITDMRRRTGAEIRVYSK-ADKPKY---LSFDDELVQVAGPPTIARGALTEIA 185
Query: 213 AIM 215
+ +
Sbjct: 186 SRL 188
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 47/69 (68%)
Query: 555 TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAE 614
T+E+ +P +++G ++G G NLA IR++SGA + + ++ + + V I GT +Q +AA+
Sbjct: 422 TIELRIPNSSLGSIVGAGGVNLAEIRQVSGARLRLHEAHAGSSESVVEIQGTLDQAKAAQ 481
Query: 615 NLIQAFIMA 623
+L+Q FI A
Sbjct: 482 SLLQGFISA 490
>gi|224116384|ref|XP_002317284.1| predicted protein [Populus trichocarpa]
gi|222860349|gb|EEE97896.1| predicted protein [Populus trichocarpa]
Length = 85
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/75 (80%), Positives = 68/75 (90%)
Query: 550 LPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQ 609
PPP TLE+LVPANAVGKV+GK G+N+ANIRKISGA IE+SD+ S+RGDR+A ISGT EQ
Sbjct: 11 FPPPSTLEMLVPANAVGKVMGKGGANIANIRKISGAMIEISDANSARGDRIARISGTLEQ 70
Query: 610 KRAAENLIQAFIMAT 624
KRAAENLIQAFIMAT
Sbjct: 71 KRAAENLIQAFIMAT 85
Score = 43.1 bits (100), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 27/41 (65%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNR 350
+ +L P N +G+V+GKGG I +IR+ SGA I++ D R
Sbjct: 17 LEMLVPANAVGKVMGKGGANIANIRKISGAMIEISDANSAR 57
>gi|326530414|dbj|BAJ97633.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 580
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 104/177 (58%), Gaps = 13/177 (7%)
Query: 304 QSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDD-TKDNRDECVITVTAIES 362
+ EE IR+LC IG VIG+ G ++ + Q +GA+I V + KD E +I +++ E
Sbjct: 63 EPEEFSIRILCASELIGPVIGRSGANVRQVEQQTGARIVVQELHKDASGERLIVISSKEI 122
Query: 363 PDDIKSMAVEAVLLLQTKINDED-----------DDTVTIRLLVSSKVIGCIIGKSGSII 411
P D S +EA++LL +K++ + + RL+V SK +GCI+G+ G +I
Sbjct: 123 PADPVSPTIEALILLHSKVSASKVSEPSESEPSGEHKLVTRLVVPSKKVGCILGEGGKVI 182
Query: 412 NEIRKRTKADVRI-SKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKD 467
E+R+R A++R+ SK DKPK N+ELV+V G R+AL +I RLRD L+D
Sbjct: 183 TEMRRRIGAEIRVYSKADKPKYLSFNEELVQVSGSPDIAREALTEIASRLRDRILRD 239
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 111/231 (48%), Gaps = 27/231 (11%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAK-DRVVTIYSHVKDK 93
E RILC +IG VIG+SG + + Q+T AR+ V + A +R++ I S
Sbjct: 65 EEFSIRILCASELIGPVIGRSGANVRQVEQQTGARIVVQELHKDASGERLIVISS----- 119
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAI-ANAVANATDNDKKRKEKEECQILVPSSQSA 152
+++ D P+ +AL+ +H+ + A+ V+ ++++ + K +++VPS +
Sbjct: 120 KEIPAD-------PVSPTIEALILLHSKVSASKVSEPSESEPSGEHKLVTRLVVPSKKVG 172
Query: 153 NIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAIS 212
I+G+ G I +R + I+V K A +P + E V +SG + ++AL I+
Sbjct: 173 CILGEGGKVITEMRRRIGAEIRVYSK-ADKPKYLSFNE--ELVQVSGSPDIAREALTEIA 229
Query: 213 AIMYKFSPREDIPLETTVREAPPSIIIPS------DVPIYPPGGLYPNADP 257
+ + R+ I + + PP+ I PS P+ PP G N P
Sbjct: 230 SRLRDRILRDGI----SSFDGPPADIFPSREFTQYGRPVNPPYGRLANDTP 276
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 44/70 (62%)
Query: 555 TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAE 614
++E+ +P +++ V+G G NLA IR+ISGA +++ +++ + + I G Q R A+
Sbjct: 493 SVELRIPNSSLESVVGAGGVNLAEIRQISGARMKLLEARPGSSESIMEIQGMAHQVRVAQ 552
Query: 615 NLIQAFIMAT 624
+L+Q FI A
Sbjct: 553 SLLQGFIGAN 562
>gi|413944062|gb|AFW76711.1| hypothetical protein ZEAMMB73_249479 [Zea mays]
Length = 426
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 90/269 (33%), Positives = 148/269 (55%), Gaps = 14/269 (5%)
Query: 363 PDDIKSMAVEAVLLLQTKIND---EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
PD A EAVL +QT I D + D+ +T RLLV + I C G+ GS+ ++I+++T
Sbjct: 156 PDHELFPAQEAVLHIQTHIVDLGPDMDNIITTRLLVPASEIACFDGREGSL-SDIQRQTS 214
Query: 420 ADVRI-SKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGA 478
A+V+I + D P CA +DEL+++VGE+ + R+AL+Q+ +LR + R+ VG
Sbjct: 215 ANVQILPREDLPSCALESDELIQIVGEIKAARNALIQVTTKLR--SFLYREMPDPIQVGN 272
Query: 479 DHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGS 538
+++ + + ++ P P P+G +A + S GS G +
Sbjct: 273 INLHGAISPVAGSPRGPYQGNDIPMGAYHQASQLATSWHSKDSGGSASGSFEQGSNINDD 332
Query: 539 MSSYSSKLYGGLPPPL----TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS 594
+ ++K + PL TLE+++P +AV + +AGS LA I +ISGA + +++ +S
Sbjct: 333 IRQSATKRFA---VPLVTRSTLEIVIPNSAVASLTMRAGSKLAQISEISGAAVTLAEDRS 389
Query: 595 SRGDRVALISGTPEQKRAAENLIQAFIMA 623
+V ISGTPEQ AENL+Q FI++
Sbjct: 390 DILQKVVRISGTPEQASKAENLLQGFILS 418
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 60/125 (48%), Gaps = 11/125 (8%)
Query: 98 VDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGK 157
VD L AQ+A+L + I + + + R +LVP+S+ A G+
Sbjct: 150 VDSRRGPDHELFPAQEAVLHIQTHIVDLGPDMDNIITTR-------LLVPASEIACFDGR 202
Query: 158 AGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYK 217
G ++ ++ +T ++++ P+ E SCA+E D + I GE +A + AL ++ +
Sbjct: 203 EG-SLSDIQRQTSANVQILPR---EDLPSCALESDELIQIVGEIKAARNALIQVTTKLRS 258
Query: 218 FSPRE 222
F RE
Sbjct: 259 FLYRE 263
>gi|308080276|ref|NP_001183239.1| hypothetical protein [Zea mays]
gi|238010240|gb|ACR36155.1| unknown [Zea mays]
gi|414884425|tpg|DAA60439.1| TPA: hypothetical protein ZEAMMB73_126154 [Zea mays]
Length = 647
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 157/646 (24%), Positives = 269/646 (41%), Gaps = 99/646 (15%)
Query: 38 IYRILCPDGVIGSVIGKSGKVINSIRQET---RARVKVVDPFPGAKDRVVTIYSHVKDKE 94
++R+L P + + +N +R+ T + RV+ +DP V I
Sbjct: 30 VFRLLLPSSFSDADTMRLYAAVNPLRRRTATLQVRVEPLDPASAGGRVVAAIVGPTVPVR 89
Query: 95 DVEVDDEFNDKEPLCAAQDALLKV---HAAIANAVANATDNDKKRKEKEECQILVPSSQS 151
VE + L AQ+AL+ V A+ AV K R C +LV + +
Sbjct: 90 RVEASSSSAEPLALSPAQEALVAVIDTEGALCCAVEKEA-RGKARPGCITCLLLVDADRL 148
Query: 152 ANIIGKAGATIKRLRSKTRTSIKVT-PKDASEPTHSCAMEFDNFVLISGESEAVKKALFA 210
G+ ++R+ + ++V ++ ++P +E V I+G+ AV+KAL A
Sbjct: 149 EASTGRG--VMERIALEAGADVRVAMWEEGAQPPRGQPLE--EVVEITGDRTAVRKALVA 204
Query: 211 ISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGA 270
+S+ + + D+P+ S + G + P A +P ++ +
Sbjct: 205 LSSFL-----QGDLPIGN------------STTYVKKEGSILPWASSEVPGPNMGASCSE 247
Query: 271 ARVPDLQG-----YADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGK 325
A QG + GNT S L VS R+L P G +IGK
Sbjct: 248 ASTEFAQGSVAKTHCPEGNTGDAQSKTLQQVS------------FRLLLPTYLAGGLIGK 295
Query: 326 GGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKINDED 385
G IK I +GA IDV E VIT+ A+ESPD + A+LL+ ++ + +
Sbjct: 296 KGLIIKGIEVETGACIDVGAPVAGCKERVITICALESPDSEYHIVQSALLLIFDRMMEME 355
Query: 386 DDT---------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRI-SKGDKPKCADA 435
+T +R+LV GC++G GSII E+ T A ++I + P CA
Sbjct: 356 TNTHSTFEKASQFLVRVLVLKNQFGCLVGLGGSIIKEMVNTTGARIQILDDTEIPACAST 415
Query: 436 NDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSGTGISMPPLLP 495
+ +V++ GE+ ++R+AL + +LR+ + N + + I S S +
Sbjct: 416 FELVVQITGELMNIRNALSLVFWKLRNHIFSNETDYNNSHISSSEIAES-NATSQANIYS 474
Query: 496 SIP----------PVGPLGYD------------------QRADSGSGI-------GMLSS 520
+I PL Y Q+ D+G+G+ G+ +
Sbjct: 475 TIQYSVDNGHKVDHRSPLSYGVDSVEKSFSDLELSSSEIQKPDNGNGVRINNSDSGIQNP 534
Query: 521 SSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPP----LTLEVLVPANAVGKVIGKAGSNL 576
S G + ++ D G +SS + L G +T E V + + V G GSNL
Sbjct: 535 SDWNGIVTNNLND---GIISSDENNLVRGAEHAAITRITYETAVSGSILTLVYGDNGSNL 591
Query: 577 ANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFIM 622
A + ++SGA I + + S + + ++SG P+Q ++A+ L+ I+
Sbjct: 592 AKLTEVSGADIIVYNPPSEGNEAMIVVSGPPDQAQSAQRLLVELIL 637
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 87/184 (47%), Gaps = 19/184 (10%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKE 94
+ V +R+L P + G +IGK G +I I ET A + V P G K+RV+TI +
Sbjct: 276 QQVSFRLLLPTYLAGGLIGKKGLIIKGIEVETGACIDVGAPVAGCKERVITICALESP-- 333
Query: 95 DVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANI 154
D E++ Q ALL + + N T + ++ + ++LV +Q +
Sbjct: 334 ----DSEYH------IVQSALLLIFDRMMEMETN-THSTFEKASQFLVRVLVLKNQFGCL 382
Query: 155 IGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAI 214
+G G+ IK + + T I++ D P +CA F+ V I+GE ++ AL S +
Sbjct: 383 VGLGGSIIKEMVNTTGARIQIL-DDTEIP--ACASTFELVVQITGELMNIRNAL---SLV 436
Query: 215 MYKF 218
+K
Sbjct: 437 FWKL 440
>gi|30681758|ref|NP_850026.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|330252232|gb|AEC07326.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 632
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 156/642 (24%), Positives = 265/642 (41%), Gaps = 100/642 (15%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVD 99
R++C VIG +IG +G V++ +R+ET ++ P G+ VV I + + +
Sbjct: 28 RVVCHASVIGGIIGSNGYVVSKLRRETGTKIHCESPVNGSDHWVVFIVGSTAVNQSILLT 87
Query: 100 D---EFNDKE-------PLCAAQDALLKV--HAAIANAVANATDNDKKRKEKEECQILVP 147
D EF+ E + AAQ AL++V + + A + E+ C IL
Sbjct: 88 DRVGEFSGGEHEDWVTCEVSAAQTALIRVLERSWVVLAAKDGGGVVDGEDEEAYCGILAD 147
Query: 148 SSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKA 207
+Q ++G G ++ +R + I+V P C + D + I+G+ AVKKA
Sbjct: 148 RNQIGAVLGLGGKNVEWMRRNSGAMIRVLPPPI------CGTKNDELIQITGDVLAVKKA 201
Query: 208 LFAISAIMYKFSPREDIPLETTVR--EAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVP 265
L +S+ + +P P +++ E+ + D P +PN S +
Sbjct: 202 LVMVSSYIQNNAPLNGYPPPLSIKGYESLSTDGNSED----PHSEFFPNLRSSSLSNATE 257
Query: 266 SILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGK 325
+ +P D GN S ++V +++ G +IGK
Sbjct: 258 IVASNRHLP-----YDGGN------------------STERKVVFKIIFTSVVAGGIIGK 294
Query: 326 GGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKINDED 385
G I++++ +GA I V E V+TV+A E+ + S A A+ L+ + + D
Sbjct: 295 QGTIIRALQNETGASISVGAPLKVSGERVVTVSARENLESRYSHAQNALALVFARSVEID 354
Query: 386 DD-----------TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKP-KCA 433
+ V +LLV S G E T ADV IS G++ +
Sbjct: 355 VEKGLRPGLHNGAIVKTKLLVPSHFANSFNGNGN---REAIIATGADVHISVGNQVLEWI 411
Query: 434 DANDELVEVVGEVGSVRDALVQIILRLRDDAL------KDRDGSRNP---PVGADHIY-- 482
N+ ++E+ GE V+ AL + +LR++ L + R NP G IY
Sbjct: 412 SENEVVIEIKGEYSHVQKALTHVSSKLRENLLPKKVLGEMRARVSNPYESAGGRSQIYNL 471
Query: 483 -------SSGTGISMPPLLPSIPPVGPLG----------------YDQRADSGSGIGMLS 519
S G +S+ +P + V D+ D +L
Sbjct: 472 QPSQQDASRGDSLSVSAAVPDLKMVRSGAEVLKSNSVMHTEVLKEVDELNDFTLPQSLLE 531
Query: 520 SSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANI 579
G L M S G +SS + G +TLE+ V +A+G + G+ G+ + N+
Sbjct: 532 EDLTQGMKQLQM--SSNGDVSSLPPRSKGVSVRKITLELAVEKDALGSLYGRDGTGVDNL 589
Query: 580 RKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFI 621
++ISGA +++ D + + LISG PEQ R A +LI++ +
Sbjct: 590 QQISGANVDVKDPTGT--EATVLISGNPEQARTAMSLIESIL 629
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 81/362 (22%), Positives = 142/362 (39%), Gaps = 103/362 (28%)
Query: 306 EELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDD 365
+E IRV+C + IG +IG G + +R+ +G +I + + D V+ +
Sbjct: 23 DETAIRVVCHASVIGGIIGSNGYVVSKLRRETGTKIHCESPVNGSDHWVVFI-------- 74
Query: 366 IKSMAVEAVLLLQTKIND----EDDDTVT----------IRLLVSSKV------------ 399
+ S AV +LL ++ + E +D VT IR+L S V
Sbjct: 75 VGSTAVNQSILLTDRVGEFSGGEHEDWVTCEVSAAQTALIRVLERSWVVLAAKDGGGVVD 134
Query: 400 ----------------IGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVV 443
IG ++G G + +R+ + A +R+ P C NDEL+++
Sbjct: 135 GEDEEAYCGILADRNQIGAVLGLGGKNVEWMRRNSGAMIRVLP--PPICGTKNDELIQIT 192
Query: 444 GEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPL 503
G+V +V+ ALV + ++++A PL PP+
Sbjct: 193 GDVLAVKKALVMVSSYIQNNA---------------------------PLNGYPPPLSIK 225
Query: 504 GYDQRADSGSG-------IGMLSSSSLYGYGSLSMGDS--PYGSMSSYSSKLYGGLPPPL 554
GY+ + G+ L SSSL + + PY +S K +
Sbjct: 226 GYESLSTDGNSEDPHSEFFPNLRSSSLSNATEIVASNRHLPYDGGNSTERK--------V 277
Query: 555 TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAE 614
+++ + G +IGK G+ + ++ +GA+I + G+RV +S A E
Sbjct: 278 VFKIIFTSVVAGGIIGKQGTIIRALQNETGASISVGAPLKVSGERVVTVS-------ARE 330
Query: 615 NL 616
NL
Sbjct: 331 NL 332
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 57/119 (47%), Gaps = 17/119 (14%)
Query: 34 EESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTI------- 86
E V+++I+ V G +IGK G +I +++ ET A + V P + +RVVT+
Sbjct: 274 ERKVVFKIIFTSVVAGGIIGKQGTIIRALQNETGASISVGAPLKVSGERVVTVSARENLE 333
Query: 87 --YSHVKD------KEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRK 137
YSH ++ VE+D E + L A++K + + AN+ + + R+
Sbjct: 334 SRYSHAQNALALVFARSVEIDVEKGLRPGL--HNGAIVKTKLLVPSHFANSFNGNGNRE 390
>gi|297806983|ref|XP_002871375.1| hypothetical protein ARALYDRAFT_325507 [Arabidopsis lyrata subsp.
lyrata]
gi|297317212|gb|EFH47634.1| hypothetical protein ARALYDRAFT_325507 [Arabidopsis lyrata subsp.
lyrata]
Length = 525
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 123/466 (26%), Positives = 220/466 (47%), Gaps = 58/466 (12%)
Query: 34 EESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHV--- 90
E V++RIL +G VIGK G+VI +++ T +++ V + RV+TI + V
Sbjct: 21 EGYVLFRILGHVSQVGDVIGKDGRVIRQLKESTNSQIWVEKAPLDSLYRVITIIADVGST 80
Query: 91 -KDKEDVEVDDEFNDKEPLCA--------AQDALLKVHAAIANAVANATDNDKKRKEKEE 141
+ K V V++ N K+ AQ AL++V A+ N + R E
Sbjct: 81 SRVKLGVIVNNASNRKKEEVQEQEVEVSRAQGALIRVFEAL-NVRFGTSSTVSSRLLMEA 139
Query: 142 CQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGES 201
C ++ +IGK G ++ +R +T ++++ + SCA D V I G
Sbjct: 140 CHVVT-------VIGKGGELMEMIRKETGCNVEICQYNLP----SCADPDDVMVKIEGNV 188
Query: 202 EAVKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPS 261
AVKK L +IS+ + + I + V P ++ + P LY ++
Sbjct: 189 FAVKKVLVSISS---RLQACQSIFKKKMVGN-PHNM----QTNVVPREALYRASNVFQGD 240
Query: 262 RSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVI-RVLCPFNKIG 320
SV + R D P+ S +L + +++ V+ ++LC +IG
Sbjct: 241 ISVSRL--KHRELD-----------PLESLHRNLSQPRKDSEDNKQQVVLKILCSKERIG 287
Query: 321 RVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTK 380
RVIG G TI+ ++ +GA I + + + DE + T+TA E P+ S + A++L+ +K
Sbjct: 288 RVIGNGRATIRDLQSETGAFITLGSNRLDCDEGLFTITASEDPNAKNSPSQRALVLVFSK 347
Query: 381 INDED---------DDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDK-P 430
+ + ++T RL+V S I C++G+ G I + I++RT A + + ++ P
Sbjct: 348 MYENTTAKVLDSGLTSSITARLVVRSNQINCLMGEEGHIKSTIQQRTGAFITVLNVEQNP 407
Query: 431 KCADANDELVEVVGEVGSVRDALVQIILRLRDDALKD--RDGSRNP 474
KC N+++V++ G +V++A+ Q+ LR+D + + GS P
Sbjct: 408 KCVSENNQIVQISGAFPNVKEAINQVTSMLREDLINQSFQMGSHFP 453
>gi|42573788|ref|NP_974990.1| HEN4 isoform 2 [Arabidopsis thaliana]
gi|332010500|gb|AED97883.1| HEN4 isoform 2 [Arabidopsis thaliana]
Length = 824
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 107/173 (61%), Gaps = 10/173 (5%)
Query: 305 SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPD 364
++++V ++LC G VIG GG ++ + +GA I+V +T D+ +E +I VTA E+P+
Sbjct: 449 NQDVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNTLDDCEERLIAVTASENPE 508
Query: 365 DIKSMAVEAVLLLQTK---------INDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIR 415
S A +A++L+ ++ +++ ++T RL+V + IGC++GK G I++E+R
Sbjct: 509 CQSSPAQKAIMLIFSRLFELATNKILDNGPRSSITARLVVPTSQIGCVLGKGGVIVSEMR 568
Query: 416 KRTKADVRISKGDK-PKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKD 467
K T A ++I K ++ PKC ND++V++ GE +VR+A+ I RLRD +
Sbjct: 569 KTTGAAIQILKVEQNPKCISENDQVVQITGEFPNVREAIFHITSRLRDSVFSN 621
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 87/169 (51%), Gaps = 22/169 (13%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTA-IESPDDIK- 367
R+LCP + +G VIGK G IK ++Q++GA+I V++ + VIT+ A +S +K
Sbjct: 49 FRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVKL 108
Query: 368 -------------------SMAVEAVL-LLQTKINDEDDDTVTIRLLVSSKVIGCIIGKS 407
S A A++ + + + D DTV RLL S G +IGK
Sbjct: 109 GANNNGNAEGEKKEEEVEVSKAQGALIKVFELLAAEADSDTVVCRLLTESSHAGAVIGKG 168
Query: 408 GSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQI 456
G ++ IRK T + I + P CAD +DE+VEV G +V+ ALV I
Sbjct: 169 GQMVGSIRKETGCKISIRIENLPICADTDDEMVEVEGNAIAVKKALVSI 217
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 106/224 (47%), Gaps = 40/224 (17%)
Query: 39 YRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEV 98
+R+LCP +G+VIGKSG VI ++Q T A+++V +P G+ DRV+TI + K V++
Sbjct: 49 FRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVKL 108
Query: 99 DDEFNDK---------EPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSS 149
N + AQ AL+KV +A D+D C++L SS
Sbjct: 109 GANNNGNAEGEKKEEEVEVSKAQGALIKVFELLAAEA----DSDTV-----VCRLLTESS 159
Query: 150 QSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALF 209
+ +IGK G + +R + T K++ + + P CA D V + G + AVKKAL
Sbjct: 160 HAGAVIGKGGQMVGSIRKE--TGCKISIRIENLPI--CADTDDEMVEVEGNAIAVKKALV 215
Query: 210 AISAIMY------------------KFSPREDIPLETTVREAPP 235
+IS + +F P+ET ++E+ P
Sbjct: 216 SISRCLQNCQSIDKVRMVGNRPLEKEFQASLHRPIETIIQESLP 259
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 88/187 (47%), Gaps = 23/187 (12%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH 89
E GN++ V+++ILC G VIG GKV+ + ET A + V + ++R++ + +
Sbjct: 446 EVGNQD-VVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNTLDDCEERLIAVTA- 503
Query: 90 VKDKEDVEVDDEFNDKEPLCA---AQDALLKVHAAIANAVANATDNDKKRKEKEECQILV 146
+ P C AQ A++ + + + N ++ R +++V
Sbjct: 504 --------------SENPECQSSPAQKAIMLIFSRLFELATNKILDNGPRSSI-TARLVV 548
Query: 147 PSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKK 206
P+SQ ++GK G + +R T +I++ E C E D V I+GE V++
Sbjct: 549 PTSQIGCVLGKGGVIVSEMRKTTGAAIQIL---KVEQNPKCISENDQVVQITGEFPNVRE 605
Query: 207 ALFAISA 213
A+F I++
Sbjct: 606 AIFHITS 612
>gi|334188619|ref|NP_001190612.1| HEN4 isoform 2 [Arabidopsis thaliana]
gi|332010502|gb|AED97885.1| HEN4 isoform 2 [Arabidopsis thaliana]
Length = 866
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 107/173 (61%), Gaps = 10/173 (5%)
Query: 305 SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPD 364
++++V ++LC G VIG GG ++ + +GA I+V +T D+ +E +I VTA E+P+
Sbjct: 449 NQDVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNTLDDCEERLIAVTASENPE 508
Query: 365 DIKSMAVEAVLLLQTK---------INDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIR 415
S A +A++L+ ++ +++ ++T RL+V + IGC++GK G I++E+R
Sbjct: 509 CQSSPAQKAIMLIFSRLFELATNKILDNGPRSSITARLVVPTSQIGCVLGKGGVIVSEMR 568
Query: 416 KRTKADVRISKGDK-PKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKD 467
K T A ++I K ++ PKC ND++V++ GE +VR+A+ I RLRD +
Sbjct: 569 KTTGAAIQILKVEQNPKCISENDQVVQITGEFPNVREAIFHITSRLRDSVFSN 621
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 87/169 (51%), Gaps = 22/169 (13%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTA-IESPDDIK- 367
R+LCP + +G VIGK G IK ++Q++GA+I V++ + VIT+ A +S +K
Sbjct: 49 FRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVKL 108
Query: 368 -------------------SMAVEAVL-LLQTKINDEDDDTVTIRLLVSSKVIGCIIGKS 407
S A A++ + + + D DTV RLL S G +IGK
Sbjct: 109 GANNNGNAEGEKKEEEVEVSKAQGALIKVFELLAAEADSDTVVCRLLTESSHAGAVIGKG 168
Query: 408 GSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQI 456
G ++ IRK T + I + P CAD +DE+VEV G +V+ ALV I
Sbjct: 169 GQMVGSIRKETGCKISIRIENLPICADTDDEMVEVEGNAIAVKKALVSI 217
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 106/224 (47%), Gaps = 40/224 (17%)
Query: 39 YRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEV 98
+R+LCP +G+VIGKSG VI ++Q T A+++V +P G+ DRV+TI + K V++
Sbjct: 49 FRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVKL 108
Query: 99 DDEFNDK---------EPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSS 149
N + AQ AL+KV +A D+D C++L SS
Sbjct: 109 GANNNGNAEGEKKEEEVEVSKAQGALIKVFELLAAEA----DSDTV-----VCRLLTESS 159
Query: 150 QSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALF 209
+ +IGK G + +R + T K++ + + P CA D V + G + AVKKAL
Sbjct: 160 HAGAVIGKGGQMVGSIRKE--TGCKISIRIENLPI--CADTDDEMVEVEGNAIAVKKALV 215
Query: 210 AISAIMY------------------KFSPREDIPLETTVREAPP 235
+IS + +F P+ET ++E+ P
Sbjct: 216 SISRCLQNCQSIDKVRMVGNRPLEKEFQASLHRPIETIIQESLP 259
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 150/343 (43%), Gaps = 59/343 (17%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDN-----RDECVITVTAIES 362
+ R++ P ++IG V+GKGG + +R+ +GA I + + N ++ V+ +T E
Sbjct: 542 ITARLVVPTSQIGCVLGKGGVIVSEMRKTTGAAIQILKVEQNPKCISENDQVVQITG-EF 600
Query: 363 PDDIKSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADV 422
P+ EA+ + +++ D + S+ + + S ++ E ++D
Sbjct: 601 PN-----VREAIFHITSRLRDS---------VFSNSMKNSLAKSSSALTTERFYDRQSDN 646
Query: 423 RISKGDKPKCAD--ANDELVEVVGE----------VGSVRDALVQIILRLRDDALKDRDG 470
+S G ++ N + E V R +R +D DR
Sbjct: 647 PLSIGSHQSVSNPATNSSSLHRRSEDSFLSGSHSSVNYSRSVGTDPYIR-PEDPFPDR-- 703
Query: 471 SRNPPVGADHIYS---------SGTGISMPP--LLPSIPPVGPLGYDQRADSGSGIGMLS 519
NP G H + + ++ P L S PP P G S + G+ S
Sbjct: 704 -FNPSAGYSHNFGRRFTMDHSDNSHHLTEAPSRLWASPPPAAPRGL-----SDASGGLSS 757
Query: 520 SSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANI 579
+ + + GSL + +SS + T+E+ VPANA+ V G+ G NL +
Sbjct: 758 ARAGHVLGSLH-------ARLVFSSGHKSAIVTNTTVEIRVPANAMSFVYGEQGYNLEQL 810
Query: 580 RKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFIM 622
R+ISGA + + + DR+ +ISGTP+Q +AA+NL+ AFI+
Sbjct: 811 RQISGARVIIHEPPLGTSDRIIVISGTPDQTQAAQNLLHAFIL 853
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 88/187 (47%), Gaps = 23/187 (12%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH 89
E GN++ V+++ILC G VIG GKV+ + ET A + V + ++R++ + +
Sbjct: 446 EVGNQD-VVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNTLDDCEERLIAVTA- 503
Query: 90 VKDKEDVEVDDEFNDKEPLCA---AQDALLKVHAAIANAVANATDNDKKRKEKEECQILV 146
+ P C AQ A++ + + + N ++ R +++V
Sbjct: 504 --------------SENPECQSSPAQKAIMLIFSRLFELATNKILDNGPRSSI-TARLVV 548
Query: 147 PSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKK 206
P+SQ ++GK G + +R T +I++ E C E D V I+GE V++
Sbjct: 549 PTSQIGCVLGKGGVIVSEMRKTTGAAIQIL---KVEQNPKCISENDQVVQITGEFPNVRE 605
Query: 207 ALFAISA 213
A+F I++
Sbjct: 606 AIFHITS 612
>gi|22328051|ref|NP_201244.2| HEN4 isoform 2 [Arabidopsis thaliana]
gi|332010501|gb|AED97884.1| HEN4 isoform 2 [Arabidopsis thaliana]
Length = 857
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 107/173 (61%), Gaps = 10/173 (5%)
Query: 305 SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPD 364
++++V ++LC G VIG GG ++ + +GA I+V +T D+ +E +I VTA E+P+
Sbjct: 449 NQDVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNTLDDCEERLIAVTASENPE 508
Query: 365 DIKSMAVEAVLLLQTK---------INDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIR 415
S A +A++L+ ++ +++ ++T RL+V + IGC++GK G I++E+R
Sbjct: 509 CQSSPAQKAIMLIFSRLFELATNKILDNGPRSSITARLVVPTSQIGCVLGKGGVIVSEMR 568
Query: 416 KRTKADVRISKGDK-PKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKD 467
K T A ++I K ++ PKC ND++V++ GE +VR+A+ I RLRD +
Sbjct: 569 KTTGAAIQILKVEQNPKCISENDQVVQITGEFPNVREAIFHITSRLRDSVFSN 621
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 87/169 (51%), Gaps = 22/169 (13%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTA-IESPDDIK- 367
R+LCP + +G VIGK G IK ++Q++GA+I V++ + VIT+ A +S +K
Sbjct: 49 FRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVKL 108
Query: 368 -------------------SMAVEAVL-LLQTKINDEDDDTVTIRLLVSSKVIGCIIGKS 407
S A A++ + + + D DTV RLL S G +IGK
Sbjct: 109 GANNNGNAEGEKKEEEVEVSKAQGALIKVFELLAAEADSDTVVCRLLTESSHAGAVIGKG 168
Query: 408 GSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQI 456
G ++ IRK T + I + P CAD +DE+VEV G +V+ ALV I
Sbjct: 169 GQMVGSIRKETGCKISIRIENLPICADTDDEMVEVEGNAIAVKKALVSI 217
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 106/224 (47%), Gaps = 40/224 (17%)
Query: 39 YRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEV 98
+R+LCP +G+VIGKSG VI ++Q T A+++V +P G+ DRV+TI + K V++
Sbjct: 49 FRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVKL 108
Query: 99 DDEFNDK---------EPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSS 149
N + AQ AL+KV +A D+D C++L SS
Sbjct: 109 GANNNGNAEGEKKEEEVEVSKAQGALIKVFELLAAEA----DSDTV-----VCRLLTESS 159
Query: 150 QSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALF 209
+ +IGK G + +R + T K++ + + P CA D V + G + AVKKAL
Sbjct: 160 HAGAVIGKGGQMVGSIRKE--TGCKISIRIENLPI--CADTDDEMVEVEGNAIAVKKALV 215
Query: 210 AISAIMY------------------KFSPREDIPLETTVREAPP 235
+IS + +F P+ET ++E+ P
Sbjct: 216 SISRCLQNCQSIDKVRMVGNRPLEKEFQASLHRPIETIIQESLP 259
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 145/343 (42%), Gaps = 68/343 (19%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDN-----RDECVITVTAIES 362
+ R++ P ++IG V+GKGG + +R+ +GA I + + N ++ V+ +T E
Sbjct: 542 ITARLVVPTSQIGCVLGKGGVIVSEMRKTTGAAIQILKVEQNPKCISENDQVVQITG-EF 600
Query: 363 PDDIKSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADV 422
P+ EA+ + +++ D + S+ + + S ++ E ++D
Sbjct: 601 PN-----VREAIFHITSRLRDS---------VFSNSMKNSLAKSSSALTTERFYDRQSDN 646
Query: 423 RISKGDKPKCAD--ANDELVEVVGE----------VGSVRDALVQIILRLRDDALKDRDG 470
+S G ++ N + E V R +R +D DR
Sbjct: 647 PLSIGSHQSVSNPATNSSSLHRRSEDSFLSGSHSSVNYSRSVGTDPYIR-PEDPFPDR-- 703
Query: 471 SRNPPVGADHIYS---------SGTGISMPP--LLPSIPPVGPLGYDQRADSGSGIGMLS 519
NP G H + + ++ P L S PP P G +D+ G+
Sbjct: 704 -FNPSAGYSHNFGRRFTMDHSDNSHHLTEAPSRLWASPPPAAPRGL---SDASGGLSSAR 759
Query: 520 SSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANI 579
+ + G G S + T+E+ VPANA+ V G+ G NL +
Sbjct: 760 AGHVLGSGHKS------------------AIVTNTTVEIRVPANAMSFVYGEQGYNLEQL 801
Query: 580 RKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFIM 622
R+ISGA + + + DR+ +ISGTP+Q +AA+NL+ AFI+
Sbjct: 802 RQISGARVIIHEPPLGTSDRIIVISGTPDQTQAAQNLLHAFIL 844
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 88/187 (47%), Gaps = 23/187 (12%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH 89
E GN++ V+++ILC G VIG GKV+ + ET A + V + ++R++ + +
Sbjct: 446 EVGNQD-VVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNTLDDCEERLIAVTA- 503
Query: 90 VKDKEDVEVDDEFNDKEPLCA---AQDALLKVHAAIANAVANATDNDKKRKEKEECQILV 146
+ P C AQ A++ + + + N ++ R +++V
Sbjct: 504 --------------SENPECQSSPAQKAIMLIFSRLFELATNKILDNGPRSSI-TARLVV 548
Query: 147 PSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKK 206
P+SQ ++GK G + +R T +I++ E C E D V I+GE V++
Sbjct: 549 PTSQIGCVLGKGGVIVSEMRKTTGAAIQIL---KVEQNPKCISENDQVVQITGEFPNVRE 605
Query: 207 ALFAISA 213
A+F I++
Sbjct: 606 AIFHITS 612
>gi|9759415|dbj|BAB09870.1| unnamed protein product [Arabidopsis thaliana]
Length = 833
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 107/173 (61%), Gaps = 10/173 (5%)
Query: 305 SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPD 364
++++V ++LC G VIG GG ++ + +GA I+V +T D+ +E +I VTA E+P+
Sbjct: 449 NQDVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNTLDDCEERLIAVTASENPE 508
Query: 365 DIKSMAVEAVLLLQTK---------INDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIR 415
S A +A++L+ ++ +++ ++T RL+V + IGC++GK G I++E+R
Sbjct: 509 CQSSPAQKAIMLIFSRLFELATNKILDNGPRSSITARLVVPTSQIGCVLGKGGVIVSEMR 568
Query: 416 KRTKADVRISKGDK-PKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKD 467
K T A ++I K ++ PKC ND++V++ GE +VR+A+ I RLRD +
Sbjct: 569 KTTGAAIQILKVEQNPKCISENDQVVQITGEFPNVREAIFHITSRLRDSVFSN 621
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 87/169 (51%), Gaps = 22/169 (13%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTA-IESPDDIK- 367
R+LCP + +G VIGK G IK ++Q++GA+I V++ + VIT+ A +S +K
Sbjct: 49 FRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVKL 108
Query: 368 -------------------SMAVEAVL-LLQTKINDEDDDTVTIRLLVSSKVIGCIIGKS 407
S A A++ + + + D DTV RLL S G +IGK
Sbjct: 109 GANNNGNAEGEKKEEEVEVSKAQGALIKVFELLAAEADSDTVVCRLLTESSHAGAVIGKG 168
Query: 408 GSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQI 456
G ++ IRK T + I + P CAD +DE+VEV G +V+ ALV I
Sbjct: 169 GQMVGSIRKETGCKISIRIENLPICADTDDEMVEVEGNAIAVKKALVSI 217
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 106/224 (47%), Gaps = 40/224 (17%)
Query: 39 YRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEV 98
+R+LCP +G+VIGKSG VI ++Q T A+++V +P G+ DRV+TI + K V++
Sbjct: 49 FRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVKL 108
Query: 99 DDEFNDK---------EPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSS 149
N + AQ AL+KV +A D+D C++L SS
Sbjct: 109 GANNNGNAEGEKKEEEVEVSKAQGALIKVFELLAAEA----DSDTV-----VCRLLTESS 159
Query: 150 QSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALF 209
+ +IGK G + +R + T K++ + + P CA D V + G + AVKKAL
Sbjct: 160 HAGAVIGKGGQMVGSIRKE--TGCKISIRIENLPI--CADTDDEMVEVEGNAIAVKKALV 215
Query: 210 AISAIMY------------------KFSPREDIPLETTVREAPP 235
+IS + +F P+ET ++E+ P
Sbjct: 216 SISRCLQNCQSIDKVRMVGNRPLEKEFQASLHRPIETIIQESLP 259
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 88/187 (47%), Gaps = 23/187 (12%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH 89
E GN++ V+++ILC G VIG GKV+ + ET A + V + ++R++ + +
Sbjct: 446 EVGNQD-VVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNTLDDCEERLIAVTA- 503
Query: 90 VKDKEDVEVDDEFNDKEPLCA---AQDALLKVHAAIANAVANATDNDKKRKEKEECQILV 146
+ P C AQ A++ + + + N ++ R +++V
Sbjct: 504 --------------SENPECQSSPAQKAIMLIFSRLFELATNKILDNGPRSSI-TARLVV 548
Query: 147 PSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKK 206
P+SQ ++GK G + +R T +I++ E C E D V I+GE V++
Sbjct: 549 PTSQIGCVLGKGGVIVSEMRKTTGAAIQIL---KVEQNPKCISENDQVVQITGEFPNVRE 605
Query: 207 ALFAISA 213
A+F I++
Sbjct: 606 AIFHITS 612
>gi|124359392|gb|ABN05856.1| KH, type 1 [Medicago truncatula]
Length = 564
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 97/310 (31%), Positives = 157/310 (50%), Gaps = 51/310 (16%)
Query: 195 VLISGESEAVKKALFAIS--------AIMYKFS----------------PRE---DIPLE 227
++I G +VKKAL A+S A K + PRE +P E
Sbjct: 1 MMIEGSVSSVKKALVAVSRNLQDRHHADRTKMTGQNSHEVIHHEALVGVPRETLMSVPRE 60
Query: 228 TTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTWP 287
T + AP + + VP L+ D +L RS SIL ++ YA ++
Sbjct: 61 TFI-GAPRETL--TAVPCETLTDLH--VDHLLQRRSALSILPSSS----NSYATGVHS-- 109
Query: 288 VYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTK 347
S ++ VS L + +E+ +++C ++IG VIGKGG I++++ +GA + V +
Sbjct: 110 -LSAEVNRVSSLEPKAHQQEITFKIICSNDRIGGVIGKGGNIIRALQSETGATVSVGPSV 168
Query: 348 DNRDECVITVTAIESPDDIKSMAVEAVLLLQTKIND-----------EDDDTVTIRLLVS 396
++ +IT+TA ESP+ S A +A +L+ ++ + +VT +L+VS
Sbjct: 169 AECEDRLITITASESPESRYSPAQKATVLVFSRSVEAGIEKGIDSGLNTGSSVTAQLVVS 228
Query: 397 SKVIGCIIGKSGSIINEIRKRTKADVRISKGDK-PKCADANDELVEVVGEVGSVRDALVQ 455
S +GC++GK G I++E+RK T A +RI DK KCA ND++V++ GE +V+DAL
Sbjct: 229 SNQVGCLLGKGGVIVSEMRKATGASIRIVGTDKVSKCASDNDQVVQISGEFSNVQDALYN 288
Query: 456 IILRLRDDAL 465
RLRD+
Sbjct: 289 ATGRLRDNLF 298
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 114/267 (42%), Gaps = 40/267 (14%)
Query: 24 RINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRV 83
R++ + K +++ + ++I+C + IG VIGK G +I +++ ET A V V +DR+
Sbjct: 116 RVSSLEPKAHQQEITFKIICSNDRIGGVIGKGGNIIRALQSETGATVSVGPSVAECEDRL 175
Query: 84 VTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQ 143
+TI + E + A + +L ++ + D+ Q
Sbjct: 176 ITITA-----------SESPESRYSPAQKATVLVFSRSVEAGIEKGIDSGLNTGSSVTAQ 224
Query: 144 ILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEA 203
++V S+Q ++GK G + +R T SI++ D CA + D V ISGE
Sbjct: 225 LVVSSNQVGCLLGKGGVIVSEMRKATGASIRIVGTDK---VSKCASDNDQVVQISGEFSN 281
Query: 204 VKKALF---------------------AISAIMYKFSPR---EDIPL--ETTVREAPPSI 237
V+ AL+ ++S++ SP D+PL ++++R +
Sbjct: 282 VQDALYNATGRLRDNLFGGTLKSAGTRSLSSVQSDTSPYGRLRDVPLGSQSSLRADTNAF 341
Query: 238 IIPSDVPIYPPGGLYPNADPILPSRSV 264
+ DVP+ L + P + R V
Sbjct: 342 VRLRDVPLVGQSSLQADTSPYVRLRDV 368
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 68/112 (60%), Gaps = 5/112 (4%)
Query: 516 GMLSSSSLYGYGSLSMGDSPYGSMSSYSS-KLYGGLPPPL----TLEVLVPANAVGKVIG 570
G+ + + G S S+ ++ +GS S +L G + T+E++VP + + V G
Sbjct: 449 GLWTPPRVTGMNSGSINEASWGSTSRKGGLELVSGSKSAIVTNTTIEIVVPEDTLYLVYG 508
Query: 571 KAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFIM 622
+ GSNLA +R+ISGA + + + + DR ++SG+P++ +AA++L+QAFI+
Sbjct: 509 ENGSNLARLRQISGAKVVIHEPRPGTSDRTIVLSGSPDETQAAQSLLQAFIL 560
>gi|116787223|gb|ABK24418.1| unknown [Picea sitchensis]
gi|224286491|gb|ACN40952.1| unknown [Picea sitchensis]
Length = 481
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 101/350 (28%), Positives = 163/350 (46%), Gaps = 46/350 (13%)
Query: 309 VIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKS 368
V R+L P +G +IG+ G +K + + + ++I + + E + V+A E P+ S
Sbjct: 86 VFRLLVPTQMVGGIIGRKGEFVKKMCEETRSRIKILEGLRGTPERTVMVSAKEEPEAPVS 145
Query: 369 MAVEAVLLLQTKINDEDDD--------------TVTIRLLVSSKVIGCIIGKSGSIINEI 414
A++ +L + +I + D T++ RLLV+ G +IG+ G+ I I
Sbjct: 146 PAMDGILRVHKRIIEGGPDGRGELGRAQQGGSGTISTRLLVAGTQAGSLIGRQGATIKAI 205
Query: 415 RKRTKADVRI-SKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRN 473
++ + A VR+ + D P CA A+D LVEV GE GSV A+ I+ LR L DR S
Sbjct: 206 QEGSGAIVRVLAAEDLPFCALADDRLVEVQGEAGSVHKAVELIVSHLRK-FLVDR--SVL 262
Query: 474 PPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRAD----SGSGIG--MLSSSSLYGYG 527
P AD I P + P G++Q + G+G+G SS+
Sbjct: 263 PLFEADRT------IGNQPQIEENLPHQSWGHNQSSSVPSSGGAGLGNTQYMSSAFQHDN 316
Query: 528 SLSMGDSPYGSMSSYSSKLYG----------GLPPP------LTLEVLVPANAVGKVIGK 571
D P S + +YG PPP +T + +P + +IG
Sbjct: 317 YYPPSDLPLESQGHHGLSVYGRDPSLAGHSVANPPPAPVITQVTQHMQIPLSYADAIIGT 376
Query: 572 AGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFI 621
AG+N++ +R+ SGATI + +++ G+ I GT Q + A+ LIQ F+
Sbjct: 377 AGANISYMRRNSGATIAVQETRGVPGEMTVEIRGTATQVQTAQQLIQNFM 426
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 88/359 (24%), Positives = 151/359 (42%), Gaps = 49/359 (13%)
Query: 25 INEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVV 84
+ +K G ++R+L P ++G +IG+ G+ + + +ETR+R+K+++ G +R V
Sbjct: 73 LTDKKWPGWPGDNVFRLLVPTQMVGGIIGRKGEFVKKMCEETRSRIKILEGLRGTPERTV 132
Query: 85 TIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKE---- 140
V KE+ E P+ A D +L+VH I + + ++
Sbjct: 133 M----VSAKEEPEA--------PVSPAMDGILRVHKRIIEGGPDGRGELGRAQQGGSGTI 180
Query: 141 ECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGE 200
++LV +Q+ ++IG+ GATIK ++ + ++V A+E CA+ D V + GE
Sbjct: 181 STRLLVAGTQAGSLIGRQGATIKAIQEGSGAIVRVL---AAEDLPFCALADDRLVEVQGE 237
Query: 201 SEAVKKALFAISAIMYKF-SPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPIL 259
+ +V KA+ I + + KF R +PL R I ++P G
Sbjct: 238 AGSVHKAVELIVSHLRKFLVDRSVLPLFEADRTIGNQPQIEENLPHQSWGHNQ------- 290
Query: 260 PSRSVPSILGA--ARVPDLQGYADTGNTWP---------------VYSTGLSLVSGLVGA 302
S SVPS GA + N +P VY SL V
Sbjct: 291 -SSSVPSSGGAGLGNTQYMSSAFQHDNYYPPSDLPLESQGHHGLSVYGRDPSLAGHSVAN 349
Query: 303 SQSEELVIRVL----CPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITV 357
++ +V P + +IG G I +R+ SGA I V +T+ E + +
Sbjct: 350 PPPAPVITQVTQHMQIPLSYADAIIGTAGANISYMRRNSGATIAVQETRGVPGEMTVEI 408
>gi|308804768|ref|XP_003079696.1| putative KH domain containing protein (ISS) [Ostreococcus tauri]
gi|116058152|emb|CAL53341.1| putative KH domain containing protein (ISS), partial [Ostreococcus
tauri]
Length = 709
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 102/343 (29%), Positives = 173/343 (50%), Gaps = 56/343 (16%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
E++ R+LCP +K G VIG+ G I+ IR +GA++ V + +N +E +I V++ + D +
Sbjct: 342 EIMFRLLCPVSKTGSVIGRNGEVIQQIRSETGAKVKVCEQINNAEERIICVSS--NDDGL 399
Query: 367 KSMAVEAVLLLQTK---INDEDDDT-VTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADV 422
M V L + ++ D + RLLV + IGC+IGK GSII +IR T A V
Sbjct: 400 APMLAAQVALFRVYRCIVDSSGSDVPLPFRLLVQTSQIGCLIGKGGSIIRQIRNETGATV 459
Query: 423 RISKGDK-PKCADANDELVEVVGEVGSVRDAL-VQIIL-RLRDDALKDRDGSRNPPVGAD 479
R+ D P CA+A+DEL+E+ G+ + AL ++I+ RLR + ++ + R
Sbjct: 460 RVLPSDALPACANADDELLEI-GQWPADACALGIRIVSGRLRGN-MRHKAAERLNV--ES 515
Query: 480 HIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGS- 538
++YS+ SM P + D+ + L S L YG + P +
Sbjct: 516 NVYSA----SMTPTMAV------------QDTPT----LQQSELMMYGMTAYETEPVDTA 555
Query: 539 MSSYSSKLYGGLPPPL---------TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEM 589
++S S PP+ ++ + + + +G V+G+ G N++ R++SGA I++
Sbjct: 556 LASLSLS-----APPVEIPGVTTVNSVHMTISSQHIGSVLGRGGCNISIARQVSGARIKL 610
Query: 590 SDSKSSRG--------DRVALISGTPEQKRAAENLIQAFIMAT 624
S R +R+ ISGT EQ +A+ +I+ FI ++
Sbjct: 611 YPGASGRNGARRAQDSERLLEISGTSEQVSSAQTIIERFIASS 653
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 90/187 (48%), Gaps = 31/187 (16%)
Query: 36 SVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKED 95
SV +R+LCP IG VIGK G+VI ++R ET ARVKV GA +RVV + S E+
Sbjct: 69 SVQFRLLCPVARIGRVIGKEGRVIKALRAETGARVKVAPTTRGADERVVLVAS----GEE 124
Query: 96 VEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEE-------------- 141
+ +DD P+ A+ AL ++ +A+ A D + E
Sbjct: 125 LMMDDGDGSDVPVTTAERALFRIFDTVASESGGALDGTRDGTSSESGSGVPESSSTGGER 184
Query: 142 ----------CQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEF 191
C++LVP +Q ++IGK GA I +R+ + ++++ P PT CA
Sbjct: 185 SMNGGRAVPICRLLVPRAQVGSLIGKGGAVISAIRASSGATVRLMPATML-PT--CASRG 241
Query: 192 DNFVLIS 198
D + I+
Sbjct: 242 DELLQIT 248
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 143/313 (45%), Gaps = 51/313 (16%)
Query: 37 VIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDV 96
+++R+LCP GSVIG++G+VI IR ET A+VKV + A++R++ + S+
Sbjct: 343 IMFRLLCPVSKTGSVIGRNGEVIQQIRSETGAKVKVCEQINNAEERIICVSSN------- 395
Query: 97 EVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIG 156
DD P+ AAQ AL +V+ I ++ + ++LV +SQ +IG
Sbjct: 396 --DDGL---APMLAAQVALFRVYRCIVDSSGSDV--------PLPFRLLVQTSQIGCLIG 442
Query: 157 KAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLI-SGESEAVKKALFAISAIM 215
K G+ I+++R++T +++V P DA +CA D + I ++A + +S +
Sbjct: 443 KGGSIIRQIRNETGATVRVLPSDA---LPACANADDELLEIGQWPADACALGIRIVSGRL 499
Query: 216 ---YKFSPREDIPLETTVREA--PPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGA 270
+ E + +E+ V A P++ + D P L + V + L +
Sbjct: 500 RGNMRHKAAERLNVESNVYSASMTPTMAV-QDTPTLQQSELMMYGMTAYETEPVDTALAS 558
Query: 271 ARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTI 330
+ + PV G++ V+ + + IG V+G+GG I
Sbjct: 559 LSL----------SAPPVEIPGVTTVNS-----------VHMTISSQHIGSVLGRGGCNI 597
Query: 331 KSIRQASGAQIDV 343
RQ SGA+I +
Sbjct: 598 SIARQVSGARIKL 610
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 83/208 (39%), Gaps = 55/208 (26%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIE-------- 361
R+LCP +IGRVIGK G IK++R +GA++ V T DE V+ V + E
Sbjct: 72 FRLLCPVARIGRVIGKEGRVIKALRAETGARVKVAPTTRGADERVVLVASGEELMMDDGD 131
Query: 362 SPDDIKSMAVEAVLLLQTKINDEDDDTV-------------------------------- 389
D + A A+ + + E +
Sbjct: 132 GSDVPVTTAERALFRIFDTVASESGGALDGTRDGTSSESGSGVPESSSTGGERSMNGGRA 191
Query: 390 --TIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDK-PKCADANDELVEVVGEV 446
RLLV +G +IGK G++I+ IR + A VR+ P CA DEL+++ V
Sbjct: 192 VPICRLLVPRAQVGSLIGKGGAVISAIRASSGATVRLMPATMLPTCASRGDELLQITAPV 251
Query: 447 ------------GSVRDALVQIILRLRD 462
SV+ AL + LR+
Sbjct: 252 RDTDGNDVDLALASVKSALRMVAKNLRE 279
Score = 42.0 bits (97), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 94/226 (41%), Gaps = 55/226 (24%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVV-GEV 446
+V RLL IG +IGK G +I +R T A V+++ P A++ +V V GE
Sbjct: 69 SVQFRLLCPVARIGRVIGKEGRVIKALRAETGARVKVA----PTTRGADERVVLVASGE- 123
Query: 447 GSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYD 506
+ + D DGS P A+ ++ + ++ D
Sbjct: 124 ---------------ELMMDDGDGSDVPVTTAER--------ALFRIFDTVASESGGALD 160
Query: 507 QRAD---SGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPAN 563
D S SG G+ SSS G S++ GG P+ +LVP
Sbjct: 161 GTRDGTSSESGSGVPESSSTGGERSMN-----------------GGRAVPI-CRLLVPRA 202
Query: 564 AVGKVIGKAGSNLANIRKISGATIE-----MSDSKSSRGDRVALIS 604
VG +IGK G+ ++ IR SGAT+ M + +SRGD + I+
Sbjct: 203 QVGSLIGKGGAVISAIRASSGATVRLMPATMLPTCASRGDELLQIT 248
Score = 38.9 bits (89), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 52/101 (51%), Gaps = 14/101 (13%)
Query: 13 DNDRDGKNQKRR--INEKDEKGNEESV-------IYRILCPDGVIGSVIGKSGKVINSIR 63
D RDG + + + E G E S+ I R+L P +GS+IGK G VI++IR
Sbjct: 160 DGTRDGTSSESGSGVPESSSTGGERSMNGGRAVPICRLLVPRAQVGSLIGKGGAVISAIR 219
Query: 64 QETRARVKVVD----PFPGAK-DRVVTIYSHVKDKEDVEVD 99
+ A V+++ P ++ D ++ I + V+D + +VD
Sbjct: 220 ASSGATVRLMPATMLPTCASRGDELLQITAPVRDTDGNDVD 260
>gi|297794027|ref|XP_002864898.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297310733|gb|EFH41157.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 865
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 106/173 (61%), Gaps = 10/173 (5%)
Query: 305 SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPD 364
++++V ++LC G VIG GG ++ + +GA I+V +T + +E +I VTA E+P+
Sbjct: 457 NQDVVFKILCSTENAGGVIGSGGKVVRMLHSETGAFINVGNTLADCEERLIAVTAPENPE 516
Query: 365 DIKSMAVEAVLLLQTK---------INDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIR 415
S A +A++LL ++ +++ ++T RL+V + IGC++GK G I++E+R
Sbjct: 517 CQSSPAQKAIMLLFSRLFELSTKKILDNGPRTSITARLVVPTSQIGCVLGKGGVIVSEMR 576
Query: 416 KRTKADVRISKGDK-PKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKD 467
K T A ++I K ++ PKC ND+++++ GE +VR+A+ I RLRD +
Sbjct: 577 KTTGATIQILKVEQNPKCVSENDQVIQITGEFPNVREAIFHITSRLRDSVFSN 629
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 87/169 (51%), Gaps = 22/169 (13%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTA-IESPDDIK- 367
R+LCP + +G VIGK G IK ++Q++GA+I V++ + VIT+ A +S +K
Sbjct: 47 FRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPFGSPDRVITIIAQADSKSRVKL 106
Query: 368 -------------------SMAVEAVL-LLQTKINDEDDDTVTIRLLVSSKVIGCIIGKS 407
S A A++ + + + D DTV RLL S G +IGK
Sbjct: 107 GVNNNGNAEGEKKEEEVEVSKAQGALIKVFELLAAEADSDTVVCRLLTESSHAGAVIGKG 166
Query: 408 GSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQI 456
G ++ IRK T + I + P CAD +DE+VE+ G +V+ ALV I
Sbjct: 167 GQMVGSIRKETGCKISIRTENLPICADTDDEMVEIEGNAIAVKKALVSI 215
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 109/227 (48%), Gaps = 40/227 (17%)
Query: 39 YRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEV 98
+R+LCP +G+VIGKSG VI ++Q T A+++V +P G+ DRV+TI + K V++
Sbjct: 47 FRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPFGSPDRVITIIAQADSKSRVKL 106
Query: 99 DDEFN---------DKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSS 149
N ++ + AQ AL+KV +A A A D+D C++L SS
Sbjct: 107 GVNNNGNAEGEKKEEEVEVSKAQGALIKVFELLA---AEA-DSDTV-----VCRLLTESS 157
Query: 150 QSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALF 209
+ +IGK G + +R +T I + +E CA D V I G + AVKKAL
Sbjct: 158 HAGAVIGKGGQMVGSIRKETGCKISIR----TENLPICADTDDEMVEIEGNAIAVKKALV 213
Query: 210 AISAIMY------------------KFSPREDIPLETTVREAPPSII 238
+IS + +F P+ET ++E+ P I
Sbjct: 214 SISRCLQNCQSIDKVRMVGNRPLEKEFQASLHRPIETIIQESLPRSI 260
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 145/343 (42%), Gaps = 68/343 (19%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDN-----RDECVITVTAIES 362
+ R++ P ++IG V+GKGG + +R+ +GA I + + N ++ VI +T E
Sbjct: 550 ITARLVVPTSQIGCVLGKGGVIVSEMRKTTGATIQILKVEQNPKCVSENDQVIQITG-EF 608
Query: 363 PDDIKSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADV 422
P+ EA+ + +++ D + S+ + I S ++ E ++D
Sbjct: 609 PN-----VREAIFHITSRLRDS---------VFSNSMKNSITKSSSALTTERIYHRQSDN 654
Query: 423 RISKGDKPKCAD--ANDELVEVVGE----------VGSVRDALVQIILRLRDDALKDRDG 470
+S G ++ N + E V R +R +D DR
Sbjct: 655 PLSIGSHQSVSNPPTNSSSLHRRSEDSFLSGSHSSVNYSRPVGTDPYVR-PEDPFPDR-- 711
Query: 471 SRNPPVG----------ADHIYSSGTGISMPP-LLPSIPPVGPLGYDQRADSGSGIGMLS 519
NP G DH S +P L S PP P G LS
Sbjct: 712 -FNPSAGYSPNFGRRFTMDHSDISHHLTEVPSRLWASPPPAAPRG-------------LS 757
Query: 520 SSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANI 579
+S G LS + + S + S + T+E+ VP NA+ V G+ G NL +
Sbjct: 758 DAS----GGLSSARAGHALGSGHKSAIVTNT----TVEIRVPENAMSFVYGEQGYNLEQL 809
Query: 580 RKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFIM 622
R+ISGA + + + DR+ +ISGTP+Q +AA+NL+ AFI+
Sbjct: 810 RQISGARVIVHEPPLGTSDRIIVISGTPDQTQAAQNLLHAFIL 852
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 87/187 (46%), Gaps = 23/187 (12%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH 89
E GN++ V+++ILC G VIG GKV+ + ET A + V + ++R++ + +
Sbjct: 454 EVGNQD-VVFKILCSTENAGGVIGSGGKVVRMLHSETGAFINVGNTLADCEERLIAVTA- 511
Query: 90 VKDKEDVEVDDEFNDKEPLCA---AQDALLKVHAAIANAVANATDNDKKRKEKEECQILV 146
+ P C AQ A++ + + + ++ R +++V
Sbjct: 512 --------------PENPECQSSPAQKAIMLLFSRLFELSTKKILDNGPRTSI-TARLVV 556
Query: 147 PSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKK 206
P+SQ ++GK G + +R T +I++ E C E D + I+GE V++
Sbjct: 557 PTSQIGCVLGKGGVIVSEMRKTTGATIQIL---KVEQNPKCVSENDQVIQITGEFPNVRE 613
Query: 207 ALFAISA 213
A+F I++
Sbjct: 614 AIFHITS 620
>gi|255561873|ref|XP_002521945.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223538749|gb|EEF40349.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 548
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 167/356 (46%), Gaps = 37/356 (10%)
Query: 27 EKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTI 86
EK G ++R+L P +GS+IG+ G+ I I +ETRAR+K++D PG +R V +
Sbjct: 142 EKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMV 201
Query: 87 YSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAV-ANATDNDKKRKEKEECQIL 145
+ K++ D L A D LL+VH I + + +++ K ++L
Sbjct: 202 SA--KEEPD----------SALPPAMDGLLRVHKRIVDGLDGDSSHASSGTGTKVSTRLL 249
Query: 146 VPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVK 205
VP+SQ+ ++IGK G T+K ++ + ++V +E A++ D V + G++ V
Sbjct: 250 VPASQAGSLIGKQGGTVKSIQEASSCVVRVL---GAEDLPVFALQDDRVVEVLGDAAGVH 306
Query: 206 KALFAISAIMYKF-SPREDIPL---ETTVREAPPSIIIPSDVPIYPPGGLYPNA------ 255
KA+ I++ + KF R IPL ++ P +P PP G+ PNA
Sbjct: 307 KAVELIASHLRKFLVDRSIIPLFEMHMQMQNPPHMEHMPPHQSWGPPQGIPPNAGGGPGY 366
Query: 256 -DP--ILPSRSVPSILGAARVP------DLQGYADTGNTWPVYSTGLSLVSGLVGASQSE 306
+P + P R + + A +P QG + G P+ G S + S
Sbjct: 367 GNPQYMPPPRQIENYYPPADLPPPMEKQPHQGISAYGREAPMGVHGSS--NSQAAPSMIT 424
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIES 362
++ ++ P + VIG G +I IR+ASGA + + +T+ E + ++ S
Sbjct: 425 QITQQMQIPLSYADAVIGTAGTSISYIRRASGATVTIQETRGVPGEMTVEISGTAS 480
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 100/350 (28%), Positives = 156/350 (44%), Gaps = 42/350 (12%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
E V R+L P K+G +IG+ G IK I + + A+I + D E + V+A E PD
Sbjct: 151 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMVSAKEEPDSA 210
Query: 367 KSMAVEAVLLLQTKINDE-DDDT----------VTIRLLVSSKVIGCIIGKSGSIINEIR 415
A++ +L + +I D D D+ V+ RLLV + G +IGK G + I+
Sbjct: 211 LPPAMDGLLRVHKRIVDGLDGDSSHASSGTGTKVSTRLLVPASQAGSLIGKQGGTVKSIQ 270
Query: 416 KRTKADVRI-SKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDR------ 468
+ + VR+ D P A +D +VEV+G+ V A+ I LR L DR
Sbjct: 271 EASSCVVRVLGAEDLPVFALQDDRVVEVLGDAAGVHKAVELIASHLRK-FLVDRSIIPLF 329
Query: 469 -----------------DGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADS 511
S PP G G G P +P PP Y AD
Sbjct: 330 EMHMQMQNPPHMEHMPPHQSWGPPQGIPPNAGGGPGYGNPQYMP--PPRQIENYYPPADL 387
Query: 512 GSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGK 571
+ + YG ++P G S +S+ + +T ++ +P + VIG
Sbjct: 388 PPPMEKQPHQGISAYGR----EAPMGVHGSSNSQAAPSMITQITQQMQIPLSYADAVIGT 443
Query: 572 AGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFI 621
AG++++ IR+ SGAT+ + +++ G+ ISGT Q + A+ LIQ F+
Sbjct: 444 AGTSISYIRRASGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFM 493
>gi|302814684|ref|XP_002989025.1| hypothetical protein SELMODRAFT_447544 [Selaginella moellendorffii]
gi|300143126|gb|EFJ09819.1| hypothetical protein SELMODRAFT_447544 [Selaginella moellendorffii]
Length = 1034
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 97/319 (30%), Positives = 151/319 (47%), Gaps = 39/319 (12%)
Query: 318 KIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVLLL 377
KIG+VIGK G IK +R +GA I + D + ++ + +++ +S A E LL
Sbjct: 512 KIGKVIGKKGSQIKKLRDETGAHIKIADPMNTTEDRAVLISSKNEGVSDRSCA-ELALLE 570
Query: 378 QTKINDEDDDTVT---------------IRLLVSSKVIGCIIGKSGSIINEIRKRTKADV 422
I +D D T RLL++ G +IGK+G+ I IR + A V
Sbjct: 571 VVTILLKDGDGATPSAAIGPQHQGSPNLTRLLIAGSQAGSLIGKAGANIKNIRGSSSASV 630
Query: 423 RISKGDK-PKCADA--NDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGAD 479
R+ D+ P C+ A D LV++ GEV +V+ A+ + LRD+ K+ + NP
Sbjct: 631 RVLPSDQLPLCSAACETDRLVQISGEVAAVQMAIELVAANLRDNPPKETVPT-NPEAKTA 689
Query: 480 HIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPY-GS 538
+ LLP G+ SS +LYG + Y G
Sbjct: 690 YFLGIDGNTGQQVLLPHSSVAAVYGHSP-----------SSMALYGLQPHPLAGPAYAGG 738
Query: 539 MSSYSSKLYGG----LPPPL---TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSD 591
+ + + LY LPP L + E+ VP++ +G +IGK G +++++R +SGATI+++
Sbjct: 739 VLAQAPPLYANPAARLPPMLPKVSAEMSVPSSVMGGLIGKGGFHISHMRSVSGATIKVNG 798
Query: 592 SKSSRGDRVALISGTPEQK 610
SK S +R L GT EQK
Sbjct: 799 SKESSVERTILFEGTQEQK 817
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 95/323 (29%), Positives = 149/323 (46%), Gaps = 42/323 (13%)
Query: 48 IGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEP 107
IG VIGK G I +R ET A +K+ DP +DR V I S ++ +D+
Sbjct: 513 IGKVIGKKGSQIKKLRDETGAHIKIADPMNTTEDRAVLISSK---------NEGVSDRS- 562
Query: 108 LCAAQDALLKVHAAIAN----AVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIK 163
A+ ALL+V + A +A + + ++L+ SQ+ ++IGKAGA IK
Sbjct: 563 --CAELALLEVVTILLKDGDGATPSAAIGPQHQGSPNLTRLLIAGSQAGSLIGKAGANIK 620
Query: 164 RLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPRED 223
+R + S++V P D P S A E D V ISGE AV+ A+ ++A + P+E
Sbjct: 621 NIRGSSSASVRVLPSD-QLPLCSAACETDRLVQISGEVAAVQMAIELVAANLRDNPPKET 679
Query: 224 IPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILG----AARVPDLQGY 279
+P T EA + + D +LP SV ++ G + + LQ +
Sbjct: 680 VP---TNPEAKTAYFLGIDGNT--------GQQVLLPHSSVAAVYGHSPSSMALYGLQPH 728
Query: 280 ADTGNTWPVYSTGLSLVSGLVGASQSEEL-------VIRVLCPFNKIGRVIGKGGGTIKS 332
G P Y+ G+ + + A+ + L + P + +G +IGKGG I
Sbjct: 729 PLAG---PAYAGGVLAQAPPLYANPAARLPPMLPKVSAEMSVPSSVMGGLIGKGGFHISH 785
Query: 333 IRQASGAQIDVDDTKDNRDECVI 355
+R SGA I V+ +K++ E I
Sbjct: 786 MRSVSGATIKVNGSKESSVERTI 808
>gi|28261405|gb|AAO37829.1| HEN4 isoform 2 [Arabidopsis thaliana]
Length = 836
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 105/173 (60%), Gaps = 10/173 (5%)
Query: 305 SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPD 364
++++V ++LC G VIG GG ++ + +GA I+V + D+ +E +I VTA E+P+
Sbjct: 461 NQDVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNALDDCEERLIAVTASENPE 520
Query: 365 DIKSMAVEAVLLLQTK---------INDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIR 415
S A +A++L+ ++ +++ ++T RL+V + IGC++GK G I++E+R
Sbjct: 521 CQSSPAQKAIMLIFSRLFELATNKILDNGPRSSITARLVVPTSQIGCVLGKGGVIVSEMR 580
Query: 416 KRTKADVRISKGDK-PKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKD 467
K T A ++I K ++ PKC ND++V++ E +VR+A+ I RLRD +
Sbjct: 581 KTTGAAIQILKVEQNPKCISENDQVVQITEEFPNVREAIFHITSRLRDSVFSN 633
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 87/169 (51%), Gaps = 22/169 (13%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTA-IESPDDIK- 367
R+LCP + +G VIGK G IK ++Q++GA+I V++ + VIT+ A +S +K
Sbjct: 49 FRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVKL 108
Query: 368 -------------------SMAVEAVL-LLQTKINDEDDDTVTIRLLVSSKVIGCIIGKS 407
S A A++ + + + D DTV RLL S G +IGK
Sbjct: 109 GANNNGNAEGEKKEEEVEVSKAQGALIKVFELLAAEADSDTVVCRLLTESSHAGAVIGKG 168
Query: 408 GSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQI 456
G ++ IRK T + I + P CAD +DE+VEV G +V+ ALV I
Sbjct: 169 GQMVGSIRKETGCKISIRIENLPICADTDDEMVEVEGNAIAVKKALVSI 217
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 108/224 (48%), Gaps = 40/224 (17%)
Query: 39 YRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEV 98
+R+LCP +G+VIGKSG VI ++Q T A+++V +P G+ DRV+TI + K V++
Sbjct: 49 FRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVKL 108
Query: 99 DDEFN---------DKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSS 149
N ++ + AQ AL+KV +A D+D C++L SS
Sbjct: 109 GANNNGNAEGEKKEEEVEVSKAQGALIKVFELLAAEA----DSDTV-----VCRLLTESS 159
Query: 150 QSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALF 209
+ +IGK G + +R + T K++ + + P CA D V + G + AVKKAL
Sbjct: 160 HAGAVIGKGGQMVGSIRKE--TGCKISIRIENLPI--CADTDDEMVEVEGNAIAVKKALV 215
Query: 210 AISAIMY------------------KFSPREDIPLETTVREAPP 235
+IS + +F P+ET ++E+ P
Sbjct: 216 SISRCLQNCQSIDKVRMVGNRPLEKEFQASLHRPIETIIQESLP 259
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 87/187 (46%), Gaps = 23/187 (12%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH 89
E GN++ V+++ILC G VIG GKV+ + ET A + V + ++R++ + +
Sbjct: 458 EVGNQD-VVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNALDDCEERLIAVTA- 515
Query: 90 VKDKEDVEVDDEFNDKEPLCA---AQDALLKVHAAIANAVANATDNDKKRKEKEECQILV 146
+ P C AQ A++ + + + N ++ R +++V
Sbjct: 516 --------------SENPECQSSPAQKAIMLIFSRLFELATNKILDNGPRSSI-TARLVV 560
Query: 147 PSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKK 206
P+SQ ++GK G + +R T +I++ E C E D V I+ E V++
Sbjct: 561 PTSQIGCVLGKGGVIVSEMRKTTGAAIQIL---KVEQNPKCISENDQVVQITEEFPNVRE 617
Query: 207 ALFAISA 213
A+F I++
Sbjct: 618 AIFHITS 624
>gi|28261403|gb|AAO37828.1| HEN4 [Arabidopsis thaliana]
Length = 869
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 105/173 (60%), Gaps = 10/173 (5%)
Query: 305 SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPD 364
++++V ++LC G VIG GG ++ + +GA I+V + D+ +E +I VTA E+P+
Sbjct: 461 NQDVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNALDDCEERLIAVTASENPE 520
Query: 365 DIKSMAVEAVLLLQTK---------INDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIR 415
S A +A++L+ ++ +++ ++T RL+V + IGC++GK G I++E+R
Sbjct: 521 CQSSPAQKAIMLIFSRLFELATNKILDNGPRSSITARLVVPTSQIGCVLGKGGVIVSEMR 580
Query: 416 KRTKADVRISKGDK-PKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKD 467
K T A ++I K ++ PKC ND++V++ E +VR+A+ I RLRD +
Sbjct: 581 KTTGAAIQILKVEQNPKCISENDQVVQITEEFPNVREAIFHITSRLRDSVFSN 633
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 87/169 (51%), Gaps = 22/169 (13%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTA-IESPDDIK- 367
R+LCP + +G VIGK G IK ++Q++GA+I V++ + VIT+ A +S +K
Sbjct: 49 FRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVKL 108
Query: 368 -------------------SMAVEAVL-LLQTKINDEDDDTVTIRLLVSSKVIGCIIGKS 407
S A A++ + + + D DTV RLL S G +IGK
Sbjct: 109 GANNNGNAEGEKKEEEVEVSKAQGALIKVFELLAAEADSDTVVCRLLTESSHAGAVIGKG 168
Query: 408 GSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQI 456
G ++ IRK T + I + P CAD +DE+VEV G +V+ ALV I
Sbjct: 169 GQMVGSIRKETGCKISIRIENLPICADTDDEMVEVEGNAIAVKKALVSI 217
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 106/224 (47%), Gaps = 40/224 (17%)
Query: 39 YRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEV 98
+R+LCP +G+VIGKSG VI ++Q T A+++V +P G+ DRV+TI + K V++
Sbjct: 49 FRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVKL 108
Query: 99 DDEFNDK---------EPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSS 149
N + AQ AL+KV +A D+D C++L SS
Sbjct: 109 GANNNGNAEGEKKEEEVEVSKAQGALIKVFELLAAEA----DSDTV-----VCRLLTESS 159
Query: 150 QSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALF 209
+ +IGK G + +R + T K++ + + P CA D V + G + AVKKAL
Sbjct: 160 HAGAVIGKGGQMVGSIRKE--TGCKISIRIENLPI--CADTDDEMVEVEGNAIAVKKALV 215
Query: 210 AISAIMY------------------KFSPREDIPLETTVREAPP 235
+IS + +F P+ET ++E+ P
Sbjct: 216 SISRCLQNCQSIDKVRMVGNRPLEKEFQASLHRPIETIIQESLP 259
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 145/343 (42%), Gaps = 68/343 (19%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDN-----RDECVITVTAIES 362
+ R++ P ++IG V+GKGG + +R+ +GA I + + N ++ V+ +T E
Sbjct: 554 ITARLVVPTSQIGCVLGKGGVIVSEMRKTTGAAIQILKVEQNPKCISENDQVVQITE-EF 612
Query: 363 PDDIKSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADV 422
P+ EA+ + +++ D + S+ + + S ++ E ++D
Sbjct: 613 PN-----VREAIFHITSRLRDS---------VFSNSMKNSLAKSSSALTTERFYDRQSDN 658
Query: 423 RISKGDKPKCAD--ANDELVEVVGE----------VGSVRDALVQIILRLRDDALKDRDG 470
+S G ++ N + E V R +R +D DR
Sbjct: 659 PLSIGSHQSVSNPATNSSSLHRRSEDSFLSGSHSSVNYSRSVGTDPYIR-PEDPFPDR-- 715
Query: 471 SRNPPVGADHIYS---------SGTGISMPP--LLPSIPPVGPLGYDQRADSGSGIGMLS 519
NP G H + + ++ P L S PP P G +D+ G+
Sbjct: 716 -FNPSAGYSHNFGRRFTMDHSDNSHHLTEAPSRLWASPPPAAPRGL---SDASGGLSSAR 771
Query: 520 SSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANI 579
+ + G G S + T+E+ VPANA+ V G+ G NL +
Sbjct: 772 AGHVLGSGHKS------------------AIVTNTTVEIRVPANAMSFVYGEQGYNLEQL 813
Query: 580 RKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFIM 622
R+ISGA + + + DR+ +ISGTP+Q +AA+NL+ AFI+
Sbjct: 814 RQISGARVIIHEPPLGTSDRIIVISGTPDQTQAAQNLLHAFIL 856
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 87/187 (46%), Gaps = 23/187 (12%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH 89
E GN++ V+++ILC G VIG GKV+ + ET A + V + ++R++ + +
Sbjct: 458 EVGNQD-VVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNALDDCEERLIAVTA- 515
Query: 90 VKDKEDVEVDDEFNDKEPLCA---AQDALLKVHAAIANAVANATDNDKKRKEKEECQILV 146
+ P C AQ A++ + + + N ++ R +++V
Sbjct: 516 --------------SENPECQSSPAQKAIMLIFSRLFELATNKILDNGPRSSI-TARLVV 560
Query: 147 PSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKK 206
P+SQ ++GK G + +R T +I++ E C E D V I+ E V++
Sbjct: 561 PTSQIGCVLGKGGVIVSEMRKTTGAAIQIL---KVEQNPKCISENDQVVQITEEFPNVRE 617
Query: 207 ALFAISA 213
A+F I++
Sbjct: 618 AIFHITS 624
>gi|297742912|emb|CBI35779.3| unnamed protein product [Vitis vinifera]
Length = 340
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 96/317 (30%), Positives = 146/317 (46%), Gaps = 59/317 (18%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNR-DECVITVTA---IESPDD 365
+R++CP IG VI KGG I IR+ SGA I VD T D+C++T+ A + P
Sbjct: 45 LRLVCPIRNIGGVIRKGGVFINQIRRESGAIIKVDSTSAAEADDCLVTILAKERLHFPRG 104
Query: 366 IKSMAVEAVLLLQTKINDED--DDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVR 423
++ + + ++ D + T T+RLLVS IGC+IGK G II IR + A +R
Sbjct: 105 PQTSHCIFLYRMCMRLWDWNCPSGTFTVRLLVSFNQIGCVIGKGGQIIQSIRSESGAQIR 164
Query: 424 ISKGDK-PKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIY 482
I K D P C+ +++EL+++ E VR L QI RL D+ P + H++
Sbjct: 165 ILKDDHLPSCSLSSNELIQISKEPSIVRKILYQIASRLHDN-----------PSRSQHLF 213
Query: 483 SSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSY 542
V P+GY + SGS +G+ S + + M
Sbjct: 214 VY---------------VVPIGY---SSSGSLMGLTSGAPI---------------MDEA 240
Query: 543 SSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEM-SDSKSSRGDRVA 601
SSK + +L ++ P +G +IGK + IR+ GATI++ S S D +
Sbjct: 241 SSKEF-------SLCLVCPIGNIGGMIGKGDVIINQIRQEFGATIKVDSTSVVEANDCLV 293
Query: 602 LISGTPEQKRAAENLIQ 618
IS NL++
Sbjct: 294 TISAKERLHLFKVNLLE 310
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 142/336 (42%), Gaps = 74/336 (22%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAK--DRVVTIYSHVKDKEDVE 97
R++CP IG VI K G IN IR+E+ A +KV D A+ D +VTI + KE +
Sbjct: 46 RLVCPIRNIGGVIRKGGVFINQIRRESGAIIKV-DSTSAAEADDCLVTILA----KERLH 100
Query: 98 VDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGK 157
Q + H + + ++LV +Q +IGK
Sbjct: 101 FPR---------GPQTS----HCIFLYRMCMRLWDWNCPSGTFTVRLLVSFNQIGCVIGK 147
Query: 158 AGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYK 217
G I+ +RS++ I++ KD P SC++ + + IS E V+K I+Y+
Sbjct: 148 GGQIIQSIRSESGAQIRIL-KDDHLP--SCSLSSNELIQISKEPSIVRK-------ILYQ 197
Query: 218 FSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQ 277
+ R L+ N PSRS L VP
Sbjct: 198 IASR-----------------------------LHDN-----PSRS--QHLFVYVVPI-- 219
Query: 278 GYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQAS 337
GY+ +G+ GL+ + ++ + S+E + ++CP IG +IGKG I IRQ
Sbjct: 220 GYSSSGSL-----MGLTSGAPIMDEASSKEFSLCLVCPIGNIGGMIGKGDVIINQIRQEF 274
Query: 338 GAQIDVDDTK-DNRDECVITVTAIESPDDIKSMAVE 372
GA I VD T ++C++T++A E K +E
Sbjct: 275 GATIKVDSTSVVEANDCLVTISAKERLHLFKVNLLE 310
>gi|296087899|emb|CBI35182.3| unnamed protein product [Vitis vinifera]
Length = 511
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 104/353 (29%), Positives = 161/353 (45%), Gaps = 50/353 (14%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
E V R+L P K+G +IG+ G IK I + + A+I + D E + V+A E PD
Sbjct: 116 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMVSAKEEPDSS 175
Query: 367 KSMAVEAVLLLQTKIND--EDDDT-------VTIRLLVSSKVIGCIIGKSGSIINEIRKR 417
A++ +L + +I D E D + V+ RLLV++ G +IGK G + I++
Sbjct: 176 LPPAMDGLLKVHKRIVDGLEGDSSHMPPGGKVSTRLLVAASQAGSLIGKQGGTVKSIQEA 235
Query: 418 TKADVRI-SKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRD------- 469
+ VR+ D P A +D +VEVVGE V A+ I LR L DR
Sbjct: 236 SNCIVRVLGAEDLPIFALQDDRVVEVVGEPIGVHKAVELIASHLRK-FLVDRSVIPLFEM 294
Query: 470 --GSRNPPVGADHIYSSGTGISMPPLLPSIPPVG--PLGYDQRADSGSGIGMLSSSSLYG 525
NPP+ +H MPP P PP G P + M L
Sbjct: 295 QMQMSNPPI--EH---------MPPHQPWGPPQGLPPNASGGPGFGPNPPYMPPPRQLDS 343
Query: 526 Y-----GSLSMGDSPYGSMSSYSSKL-YGGLPP-----------PLTLEVLVPANAVGKV 568
Y + P+ +S+Y ++ GG P +T ++ +P + V
Sbjct: 344 YYPPPELPPPVEKQPHQGISAYGREVPMGGHAPSSAQPAPSMITQVTQQMQIPLSYADAV 403
Query: 569 IGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFI 621
IG AG++++ IR+ SGAT+ + +++ G+ I+GT Q +AA+ LIQ F+
Sbjct: 404 IGTAGASISYIRRASGATVTIQETRGVPGEMTVEINGTASQVQAAQQLIQNFM 456
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 106/380 (27%), Positives = 171/380 (45%), Gaps = 44/380 (11%)
Query: 3 DSGKRYRSQRDNDRD-GKNQKRRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINS 61
DS + + RD+D G +KR E ++R+L P +GS+IG+ G+ I
Sbjct: 88 DSQPQQKRGRDDDSAIGGGEKRWPGWPGES------VFRMLVPAQKVGSIIGRKGEFIKK 141
Query: 62 IRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAA 121
I +ETRAR+K++D PG +R V + + K++ D L A D LLKVH
Sbjct: 142 IVEETRARIKILDGPPGTAERAVMVSA--KEEPDSS----------LPPAMDGLLKVHKR 189
Query: 122 IANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDAS 181
I + + + + K ++LV +SQ+ ++IGK G T+K ++ + ++V +
Sbjct: 190 IVDGLEGDSSH-MPPGGKVSTRLLVAASQAGSLIGKQGGTVKSIQEASNCIVRVL---GA 245
Query: 182 EPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKF-SPREDIPL-ETTVREA-PPSII 238
E A++ D V + GE V KA+ I++ + KF R IPL E ++ + PP
Sbjct: 246 EDLPIFALQDDRVVEVVGEPIGVHKAVELIASHLRKFLVDRSVIPLFEMQMQMSNPPIEH 305
Query: 239 IPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPD----------------LQGYADT 282
+P P PP GL PNA P + R D QG +
Sbjct: 306 MPPHQPWGPPQGLPPNASGGPGFGPNPPYMPPPRQLDSYYPPPELPPPVEKQPHQGISAY 365
Query: 283 GNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQID 342
G P+ G + S S ++ ++ P + VIG G +I IR+ASGA +
Sbjct: 366 GREVPM--GGHAPSSAQPAPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRASGATVT 423
Query: 343 VDDTKDNRDECVITVTAIES 362
+ +T+ E + + S
Sbjct: 424 IQETRGVPGEMTVEINGTAS 443
>gi|225463940|ref|XP_002269249.1| PREDICTED: poly(rC)-binding protein 3-like [Vitis vinifera]
Length = 442
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 104/353 (29%), Positives = 161/353 (45%), Gaps = 50/353 (14%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
E V R+L P K+G +IG+ G IK I + + A+I + D E + V+A E PD
Sbjct: 47 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMVSAKEEPDSS 106
Query: 367 KSMAVEAVLLLQTKIND--EDDDT-------VTIRLLVSSKVIGCIIGKSGSIINEIRKR 417
A++ +L + +I D E D + V+ RLLV++ G +IGK G + I++
Sbjct: 107 LPPAMDGLLKVHKRIVDGLEGDSSHMPPGGKVSTRLLVAASQAGSLIGKQGGTVKSIQEA 166
Query: 418 TKADVRI-SKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRD------- 469
+ VR+ D P A +D +VEVVGE V A+ I LR L DR
Sbjct: 167 SNCIVRVLGAEDLPIFALQDDRVVEVVGEPIGVHKAVELIASHLRK-FLVDRSVIPLFEM 225
Query: 470 --GSRNPPVGADHIYSSGTGISMPPLLPSIPPVG--PLGYDQRADSGSGIGMLSSSSLYG 525
NPP+ +H MPP P PP G P + M L
Sbjct: 226 QMQMSNPPI--EH---------MPPHQPWGPPQGLPPNASGGPGFGPNPPYMPPPRQLDS 274
Query: 526 Y-----GSLSMGDSPYGSMSSYSSKL-YGGLPPP-----------LTLEVLVPANAVGKV 568
Y + P+ +S+Y ++ GG P +T ++ +P + V
Sbjct: 275 YYPPPELPPPVEKQPHQGISAYGREVPMGGHAPSSAQPAPSMITQVTQQMQIPLSYADAV 334
Query: 569 IGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFI 621
IG AG++++ IR+ SGAT+ + +++ G+ I+GT Q +AA+ LIQ F+
Sbjct: 335 IGTAGASISYIRRASGATVTIQETRGVPGEMTVEINGTASQVQAAQQLIQNFM 387
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 106/380 (27%), Positives = 171/380 (45%), Gaps = 44/380 (11%)
Query: 3 DSGKRYRSQRDNDRD-GKNQKRRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINS 61
DS + + RD+D G +KR E ++R+L P +GS+IG+ G+ I
Sbjct: 19 DSQPQQKRGRDDDSAIGGGEKRWPGWPGES------VFRMLVPAQKVGSIIGRKGEFIKK 72
Query: 62 IRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAA 121
I +ETRAR+K++D PG +R V + + K++ D L A D LLKVH
Sbjct: 73 IVEETRARIKILDGPPGTAERAVMVSA--KEEPDSS----------LPPAMDGLLKVHKR 120
Query: 122 IANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDAS 181
I + + + + K ++LV +SQ+ ++IGK G T+K ++ + ++V +
Sbjct: 121 IVDGLEGDSSH-MPPGGKVSTRLLVAASQAGSLIGKQGGTVKSIQEASNCIVRVL---GA 176
Query: 182 EPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKF-SPREDIPL-ETTVREA-PPSII 238
E A++ D V + GE V KA+ I++ + KF R IPL E ++ + PP
Sbjct: 177 EDLPIFALQDDRVVEVVGEPIGVHKAVELIASHLRKFLVDRSVIPLFEMQMQMSNPPIEH 236
Query: 239 IPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPD----------------LQGYADT 282
+P P PP GL PNA P + R D QG +
Sbjct: 237 MPPHQPWGPPQGLPPNASGGPGFGPNPPYMPPPRQLDSYYPPPELPPPVEKQPHQGISAY 296
Query: 283 GNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQID 342
G P+ G + S S ++ ++ P + VIG G +I IR+ASGA +
Sbjct: 297 GREVPM--GGHAPSSAQPAPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRASGATVT 354
Query: 343 VDDTKDNRDECVITVTAIES 362
+ +T+ E + + S
Sbjct: 355 IQETRGVPGEMTVEINGTAS 374
>gi|116784616|gb|ABK23409.1| unknown [Picea sitchensis]
Length = 407
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 96/343 (27%), Positives = 163/343 (47%), Gaps = 53/343 (15%)
Query: 302 ASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIE 361
A++ ++V R++ NKIG+VIGK G I +R+ +GA+I + D ++ VI +++
Sbjct: 87 AARGRDIVFRIVVASNKIGKVIGKQGSKINQLREDTGARIKIADPVTPLEDRVIIISSKG 146
Query: 362 SPDDIKSMAVEAVLLLQTKINDEDDDTVT-------------IRLLVSSKVIGCIIGKSG 408
++ S A +A++ + T I +E ++ +RLL++ G +IG SG
Sbjct: 147 EEEEETSAAEQALIQIATVILEESGESSATAKVGTRHVGPNMMRLLIAGSQAGSLIGASG 206
Query: 409 SIINEIRKRTKADVRI-SKGDKPKCADAN--DELVEVVGEVGSVRDALVQIILRLRDDAL 465
I EIR + A ++I + P CA A+ D LV++ GEV V AL I + LR+
Sbjct: 207 KTIKEIRNDSGATIKILPQNLSPICASASETDRLVQISGEVSQVLKALDHIGVTLRE--- 263
Query: 466 KDRDGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYG 525
+PP + S + P + P +G+ +L + L G
Sbjct: 264 -------HPP---REVIS-----TRPTYYAGLSP------------ANGLMVLPQTVLPG 296
Query: 526 YGSLSMGDSPYGSMSSYSSKLYGGLP-----PPLTLEVLVPANAVGKVIGKAGSNLANIR 580
Y ++ G+S Y + + G + P +T+E+ +P++ G VIGK G N++ IR
Sbjct: 297 Y-NMQTGNSNYSYLGAAGRAAGGTISAAFALPKVTVEMKIPSSVAGGVIGKRGDNISQIR 355
Query: 581 KISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFIMA 623
+SGA +++ K R GT Q A+NL+ I A
Sbjct: 356 SLSGAIVKVIGEKDG-ATRTIFFEGTAHQVATAQNLVNNHINA 397
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 96/325 (29%), Positives = 147/325 (45%), Gaps = 47/325 (14%)
Query: 37 VIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDV 96
+++RI+ IG VIGK G IN +R++T AR+K+ DP +DRV+ I S
Sbjct: 93 IVFRIVVASNKIGKVIGKQGSKINQLREDTGARIKIADPVTPLEDRVIIISS-------- 144
Query: 97 EVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDK---KRKEKEECQILVPSSQSAN 153
+ ++E AA+ AL+++ I ++ K + ++L+ SQ+ +
Sbjct: 145 ----KGEEEEETSAAEQALIQIATVILEESGESSATAKVGTRHVGPNMMRLLIAGSQAGS 200
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISA 213
+IG +G TIK +R+ + +IK+ P++ S P + A E D V ISGE V KAL I
Sbjct: 201 LIGASGKTIKEIRNDSGATIKILPQNLS-PICASASETDRLVQISGEVSQVLKALDHIG- 258
Query: 214 IMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARV 273
T+RE PP +I S P Y G N +LP +P
Sbjct: 259 --------------VTLREHPPREVI-STRPTYYAGLSPANGLMVLPQTVLP-------- 295
Query: 274 PDLQGY-ADTGNTWPVY--STGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTI 330
GY TGN+ Y + G + + A ++ + + P + G VIGK G I
Sbjct: 296 ----GYNMQTGNSNYSYLGAAGRAAGGTISAAFALPKVTVEMKIPSSVAGGVIGKRGDNI 351
Query: 331 KSIRQASGAQIDVDDTKDNRDECVI 355
IR SGA + V KD +
Sbjct: 352 SQIRSLSGAIVKVIGEKDGATRTIF 376
>gi|147794489|emb|CAN67081.1| hypothetical protein VITISV_007074 [Vitis vinifera]
Length = 534
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 106/389 (27%), Positives = 172/389 (44%), Gaps = 37/389 (9%)
Query: 7 RYRSQRDNDRDGKNQKRRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQET 66
R RS N+ Q+ + + E V +R+L P +GS+IG+ G+ I I +ET
Sbjct: 98 RIRSLNKNEDVMMIQQLEVVRRGGLDGLERVFFRMLVPAQKVGSIIGRKGEFIKKIVEET 157
Query: 67 RARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAV 126
RAR+K++D PG +R V + + K++ D L A D LLKVH I + +
Sbjct: 158 RARIKILDGPPGTAERAVMVSA--KEEPD----------SSLPPAMDGLLKVHKRIVDGL 205
Query: 127 ANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHS 186
+ + K ++LV +SQ+ ++IGK G T+K ++ + ++V +E
Sbjct: 206 EGDSSH-MPPGGKVSTRLLVAASQAGSLIGKQGGTVKSIQEASNCIVRVL---GAEDLPI 261
Query: 187 CAMEFDNFVLISGESEAVKKALFAISAIMYKF-SPREDIPL-ETTVREA-PPSIIIPSDV 243
A++ D V + GE V KA+ I++ + KF R IPL E ++ + PP P
Sbjct: 262 FALQDDRVVEVVGEPIGVHKAVELIASHLRKFLVDRSVIPLFEMQMQMSNPPIEHRPPHQ 321
Query: 244 PIYPPGGLYPNADPILPSRSVPSILGAARVPD----------------LQGYADTGNTWP 287
P PP GL PNA P + R D QG + G P
Sbjct: 322 PWGPPQGLPPNASGGPGFGPNPPYMPPPRQLDSYYPPPELPPPVEKQPHQGISAYGREVP 381
Query: 288 VYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTK 347
+ G + S S ++ ++ P + VIG G +I IR+ASGA + + +T+
Sbjct: 382 M--GGHAPSSAQPAPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRASGATVTIQETR 439
Query: 348 DNRDECVITVTAIESPDDIKSMAVEAVLL 376
E + + S ++A+ L
Sbjct: 440 GVPGEMTVEINGTASQVQAAQQLIQALFL 468
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 102/355 (28%), Positives = 160/355 (45%), Gaps = 50/355 (14%)
Query: 306 EELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDD 365
E + R+L P K+G +IG+ G IK I + + A+I + D E + V+A E PD
Sbjct: 126 ERVFFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMVSAKEEPDS 185
Query: 366 IKSMAVEAVLLLQTKIND--EDDDT-------VTIRLLVSSKVIGCIIGKSGSIINEIRK 416
A++ +L + +I D E D + V+ RLLV++ G +IGK G + I++
Sbjct: 186 SLPPAMDGLLKVHKRIVDGLEGDSSHMPPGGKVSTRLLVAASQAGSLIGKQGGTVKSIQE 245
Query: 417 RTKADVRI-SKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRD------ 469
+ VR+ D P A +D +VEVVGE V A+ I LR L DR
Sbjct: 246 ASNCIVRVLGAEDLPIFALQDDRVVEVVGEPIGVHKAVELIASHLRK-FLVDRSVIPLFE 304
Query: 470 ---GSRNPPVGADHIYSSGTGISMPPLLPSIPPVG--PLGYDQRADSGSGIGMLSSSSLY 524
NPP+ +H PP P PP G P + M L
Sbjct: 305 MQMQMSNPPI--EH---------RPPHQPWGPPQGLPPNASGGPGFGPNPPYMPPPRQLD 353
Query: 525 GY-----GSLSMGDSPYGSMSSYSSKL-YGGLPP-----------PLTLEVLVPANAVGK 567
Y + P+ +S+Y ++ GG P +T ++ +P +
Sbjct: 354 SYYPPPELPPPVEKQPHQGISAYGREVPMGGHAPSSAQPAPSMITQVTQQMQIPLSYADA 413
Query: 568 VIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFIM 622
VIG AG++++ IR+ SGAT+ + +++ G+ I+GT Q +AA+ LIQA +
Sbjct: 414 VIGTAGASISYIRRASGATVTIQETRGVPGEMTVEINGTASQVQAAQQLIQALFL 468
>gi|302803885|ref|XP_002983695.1| hypothetical protein SELMODRAFT_445667 [Selaginella moellendorffii]
gi|300148532|gb|EFJ15191.1| hypothetical protein SELMODRAFT_445667 [Selaginella moellendorffii]
Length = 1020
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 97/328 (29%), Positives = 152/328 (46%), Gaps = 59/328 (17%)
Query: 318 KIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVLLL 377
KIG+VIGK G IK +R +GA I + D + ++ + +++ ++ A E LL
Sbjct: 513 KIGKVIGKKGSQIKKLRDETGAHIKIADPMNTTEDRAVLISSKNEGGSDRTCA-ELALLE 571
Query: 378 QTKINDEDDDTVT---------------IRLLVSSKVIGCIIGKSGSIINEIRKRTKADV 422
I +D D T RLL++ G +IGK+G+ I IR + A V
Sbjct: 572 VVTILLKDGDGATPSAAIGPQHQGSPNLTRLLIAGSQAGSLIGKAGANIKNIRGSSSASV 631
Query: 423 RISKGDK-PKCADA--NDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGAD 479
R+ D+ P C+ A D LV++ GEV +V+ A+ + LRD NPP
Sbjct: 632 RVLPSDQLPLCSAACETDRLVQISGEVAAVQMAIELVAANLRD----------NPPK--- 678
Query: 480 HIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSM---GDSPY 536
P P LG D + + S +++YG+ SM G P+
Sbjct: 679 ---------ETVPTTPEAKTAYFLGIDGKTGQQVLLPHSSVAAVYGHSPSSMALYGLQPH 729
Query: 537 --------GSMSSYSSKLYGG----LPPPL---TLEVLVPANAVGKVIGKAGSNLANIRK 581
G + + + LY LPP L + E+ VP++ +G +IGK G +++++R
Sbjct: 730 PLAGPAYAGGVLAQAPPLYANPAARLPPMLPKVSAEMSVPSSVMGGLIGKGGFHISHMRS 789
Query: 582 ISGATIEMSDSKSSRGDRVALISGTPEQ 609
+SGATI+++ SK S +R L GT EQ
Sbjct: 790 VSGATIKVNGSKESSVERTILFEGTQEQ 817
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 95/323 (29%), Positives = 146/323 (45%), Gaps = 42/323 (13%)
Query: 48 IGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEP 107
IG VIGK G I +R ET A +K+ DP +DR V I S + D
Sbjct: 514 IGKVIGKKGSQIKKLRDETGAHIKIADPMNTTEDRAVLISSKNEGGSD------------ 561
Query: 108 LCAAQDALLKVHAAIAN----AVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIK 163
A+ ALL+V + A +A + + ++L+ SQ+ ++IGKAGA IK
Sbjct: 562 RTCAELALLEVVTILLKDGDGATPSAAIGPQHQGSPNLTRLLIAGSQAGSLIGKAGANIK 621
Query: 164 RLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPRED 223
+R + S++V P D P S A E D V ISGE AV+ A+ ++A + P+E
Sbjct: 622 NIRGSSSASVRVLPSD-QLPLCSAACETDRLVQISGEVAAVQMAIELVAANLRDNPPKET 680
Query: 224 IPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILG----AARVPDLQGY 279
+P T EA + + D +LP SV ++ G + + LQ +
Sbjct: 681 VP---TTPEAKTAYFLGIDGKT--------GQQVLLPHSSVAAVYGHSPSSMALYGLQPH 729
Query: 280 ADTGNTWPVYSTGLSLVSGLVGASQSEEL-------VIRVLCPFNKIGRVIGKGGGTIKS 332
G P Y+ G+ + + A+ + L + P + +G +IGKGG I
Sbjct: 730 PLAG---PAYAGGVLAQAPPLYANPAARLPPMLPKVSAEMSVPSSVMGGLIGKGGFHISH 786
Query: 333 IRQASGAQIDVDDTKDNRDECVI 355
+R SGA I V+ +K++ E I
Sbjct: 787 MRSVSGATIKVNGSKESSVERTI 809
>gi|297833144|ref|XP_002884454.1| hypothetical protein ARALYDRAFT_477721 [Arabidopsis lyrata subsp.
lyrata]
gi|297330294|gb|EFH60713.1| hypothetical protein ARALYDRAFT_477721 [Arabidopsis lyrata subsp.
lyrata]
Length = 568
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 97/344 (28%), Positives = 154/344 (44%), Gaps = 33/344 (9%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
E V R+L P K+G +IG+ G IK I + + A+I + D E + V+ E P+
Sbjct: 177 ETVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAVMVSGKEEPESS 236
Query: 367 KSMAVEAVLLLQTKINDEDD---------DTVTIRLLVSSKVIGCIIGKSGSIINEIRKR 417
+++ +L + +I D D V+ RLLV + G +IGK G + I++
Sbjct: 237 LPPSMDGLLRVHMRIVDGLDGEPSQAPPASKVSTRLLVPASQAGSLIGKQGGTVKAIQEA 296
Query: 418 TKADVRI-SKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDR-------D 469
+ VR+ D P A +D +VEVVGE SV AL I LR L DR +
Sbjct: 297 SACIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHKALELIASHLR-KFLVDRSIIPFFEN 355
Query: 470 GSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSL 529
+ P DH+ + P P VG GY S Y +
Sbjct: 356 QMQKPTRQMDHMPAPHQAWG--PPQGHAPSVGGGGYGHNPPP-YMQPPPRHDSYYPPPEM 412
Query: 530 ---SMGDSPYGSMSSYSSK----LYGGLPPPL-----TLEVLVPANAVGKVIGKAGSNLA 577
M P+ +S+Y + ++ PP+ T ++ +P + VIG +GSN++
Sbjct: 413 RQPPMEKQPHQGISAYGREPPMNVHVSSAPPMVAQQVTQQMQIPLSYADAVIGTSGSNIS 472
Query: 578 NIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFI 621
R++SGAT+ + +++ G+ +SGT Q + A LIQ F+
Sbjct: 473 YTRRLSGATVTIQETRGVPGEMTVEVSGTGSQVQTAMQLIQNFM 516
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 100/193 (51%), Gaps = 16/193 (8%)
Query: 26 NEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVT 85
EK G ++R+L P +GS+IG+ G VI I +ETRAR+K++D PG +R V
Sbjct: 167 EEKRWPGWPGETVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAVM 226
Query: 86 IYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQIL 145
V KE+ E L + D LL+VH I + + + + K ++L
Sbjct: 227 ----VSGKEEPESS--------LPPSMDGLLRVHMRIVDGL-DGEPSQAPPASKVSTRLL 273
Query: 146 VPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVK 205
VP+SQ+ ++IGK G T+K ++ + ++V SE A++ D V + GE +V
Sbjct: 274 VPASQAGSLIGKQGGTVKAIQEASACIVRVL---GSEDLPVFALQDDRVVEVVGEPTSVH 330
Query: 206 KALFAISAIMYKF 218
KAL I++ + KF
Sbjct: 331 KALELIASHLRKF 343
Score = 38.5 bits (88), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%)
Query: 528 SLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATI 587
SL +S G+ K + G P +LVPA VG +IG+ G + I + + A I
Sbjct: 152 SLQKSESEEGATVGGEEKRWPGWPGETVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARI 211
Query: 588 EMSDSKSSRGDRVALISGTPE 608
++ D +R ++SG E
Sbjct: 212 KILDGPPGTTERAVMVSGKEE 232
>gi|356504987|ref|XP_003521274.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 529
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 100/372 (26%), Positives = 164/372 (44%), Gaps = 50/372 (13%)
Query: 23 RRINEKDEKGNE--------ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVD 74
++ +E D KGNE ++R+L P +GS+IG+ G+ I I +ET+AR+K++D
Sbjct: 104 KQESEIDSKGNEIKKWPGWPGENVFRMLVPVQKVGSIIGRKGEFIKKITEETKARIKILD 163
Query: 75 PFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDK 134
PG +R V + + K++ D P+ A D LL+VH + N + D+
Sbjct: 164 GPPGISERAVMVSA--KEEPD----------RPIPPAIDGLLRVHKQVINVDRDLVDSAL 211
Query: 135 KRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNF 194
++LV +Q+ ++IGK G+TIK ++ + +I+V SE A+ D+
Sbjct: 212 AAGRSVVTRLLVADTQAGSLIGKQGSTIKSIQDGSGCTIRVL---GSENLPVFALRDDSI 268
Query: 195 VLISGESEAVKKALFAISAIMYKFSPREDI--PLETTVREAPPSIIIPSDVPIYPPGGLY 252
V I GES V KA+ I+ + KF I ET ++ P + + +VP + G
Sbjct: 269 VEIQGESAGVHKAVELIAVHLRKFLVDRSIVGVFETQMQR--PDVRVNQNVPPHQNWGPP 326
Query: 253 P------------------NADPILPSRSVPSILGAARVPDLQGYADTGNTWPVYSTGLS 294
P N + PS S +P + + G P Y+ S
Sbjct: 327 PQGFPAPAGGGGGGPAFAPNHQYMPPSHHYDSYYPPTELPPMDKHLHQGPP-PAYAKDAS 385
Query: 295 LVSGLVGASQSEELVIRVL----CPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNR 350
+ A + +V +V P VIG G I IR+ASGA I + +T+
Sbjct: 386 MGIHSSSAPPQQSVVTKVTQHMQIPLTYADAVIGASGTNISYIRRASGASITIQETRGVP 445
Query: 351 DECVITVTAIES 362
E + ++ S
Sbjct: 446 GEMTVEISGTSS 457
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 82/166 (49%), Gaps = 11/166 (6%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
E V R+L P K+G +IG+ G IK I + + A+I + D E + V+A E PD
Sbjct: 125 ENVFRMLVPVQKVGSIIGRKGEFIKKITEETKARIKILDGPPGISERAVMVSAKEEPDRP 184
Query: 367 KSMAVEAVLLLQTKINDEDDD----------TVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
A++ +L + ++ + D D +V RLLV+ G +IGK GS I I+
Sbjct: 185 IPPAIDGLLRVHKQVINVDRDLVDSALAAGRSVVTRLLVADTQAGSLIGKQGSTIKSIQD 244
Query: 417 RTKADVRISKGDK-PKCADANDELVEVVGEVGSVRDALVQIILRLR 461
+ +R+ + P A +D +VE+ GE V A+ I + LR
Sbjct: 245 GSGCTIRVLGSENLPVFALRDDSIVEIQGESAGVHKAVELIAVHLR 290
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 42/68 (61%)
Query: 554 LTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAA 613
+T + +P VIG +G+N++ IR+ SGA+I + +++ G+ ISGT Q +AA
Sbjct: 403 VTQHMQIPLTYADAVIGASGTNISYIRRASGASITIQETRGVPGEMTVEISGTSSQIQAA 462
Query: 614 ENLIQAFI 621
+ L+Q F+
Sbjct: 463 QQLVQNFM 470
>gi|61661324|gb|AAX51268.1| FLK [Arabidopsis thaliana]
gi|61661326|gb|AAX51269.1| FLK [Arabidopsis thaliana]
Length = 577
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 148/346 (42%), Gaps = 37/346 (10%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
E V R+L P K+G +IG+ G IK I + + A+I + D E + V+ E P+
Sbjct: 186 ETVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAVMVSGKEEPESS 245
Query: 367 KSMAVEAVLLLQTKINDEDD---------DTVTIRLLVSSKVIGCIIGKSGSIINEIRKR 417
+++ +L + +I D D V+ RLLV + G +IGK G + I++
Sbjct: 246 LPPSMDGLLRVHMRIVDGLDGEASQAPPPSKVSTRLLVPASQAGSLIGKQGGTVKAIQEA 305
Query: 418 TKADVRI-SKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDR-------D 469
+ VR+ D P A +D +VEVVGE SV AL I LR L DR +
Sbjct: 306 SACIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHRALELIASHLR-KFLVDRSIIPFFEN 364
Query: 470 GSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSL 529
+ P DH+ S P P VG GY S Y
Sbjct: 365 QMQKPTRQMDHMPPPHQ--SWGPPQGHAPSVGGGGYGHNPPPYMQPPPRHDSY---YPPP 419
Query: 530 SMGDSPYGSMSSYSSKLYGGLP---------PPL-----TLEVLVPANAVGKVIGKAGSN 575
M P YG P PP+ T ++ +P + VIG +GSN
Sbjct: 420 EMRQPPMEKQPHQGISAYGREPPMNVHVSSAPPMVAQQVTQQMQIPLSYADAVIGTSGSN 479
Query: 576 LANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFI 621
++ R++SGAT+ + +++ G+ +SGT Q + A LIQ F+
Sbjct: 480 ISYTRRLSGATVTIQETRGVPGEMTVEVSGTGSQVQTAVQLIQNFM 525
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 100/193 (51%), Gaps = 16/193 (8%)
Query: 26 NEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVT 85
EK G ++R+L P +GS+IG+ G VI I +ETRAR+K++D PG +R V
Sbjct: 176 EEKRWPGWPGETVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAVM 235
Query: 86 IYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQIL 145
V KE+ E L + D LL+VH I + + + + K ++L
Sbjct: 236 ----VSGKEEPESS--------LPPSMDGLLRVHMRIVDGL-DGEASQAPPPSKVSTRLL 282
Query: 146 VPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVK 205
VP+SQ+ ++IGK G T+K ++ + ++V SE A++ D V + GE +V
Sbjct: 283 VPASQAGSLIGKQGGTVKAIQEASACIVRVL---GSEDLPVFALQDDRVVEVVGEPTSVH 339
Query: 206 KALFAISAIMYKF 218
+AL I++ + KF
Sbjct: 340 RALELIASHLRKF 352
>gi|15229321|ref|NP_187112.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|6175183|gb|AAF04909.1|AC011437_24 putative RNA-binding protein [Arabidopsis thaliana]
gi|17979249|gb|AAL49941.1| AT3g04610/F7O18_9 [Arabidopsis thaliana]
gi|332640585|gb|AEE74106.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 577
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 148/346 (42%), Gaps = 37/346 (10%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
E V R+L P K+G +IG+ G IK I + + A+I + D E + V+ E P+
Sbjct: 186 ETVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAVMVSGKEEPESS 245
Query: 367 KSMAVEAVLLLQTKINDEDD---------DTVTIRLLVSSKVIGCIIGKSGSIINEIRKR 417
+++ +L + +I D D V+ RLLV + G +IGK G + I++
Sbjct: 246 LPPSMDGLLRVHMRIVDGLDGEASQAPPPSKVSTRLLVPASQAGSLIGKQGGTVKAIQEA 305
Query: 418 TKADVRI-SKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDR-------D 469
+ VR+ D P A +D +VEVVGE SV AL I LR L DR +
Sbjct: 306 SACIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHRALELIASHLR-KFLVDRSIIPFFEN 364
Query: 470 GSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSL 529
+ P DH+ S P P VG GY S Y
Sbjct: 365 QMQKPTRQMDHMPPPHQ--SWGPPQGHAPSVGGGGYGHNPPPYMQPPPRHDSY---YPPP 419
Query: 530 SMGDSPYGSMSSYSSKLYGGLP---------PPL-----TLEVLVPANAVGKVIGKAGSN 575
M P YG P PP+ T ++ +P + VIG +GSN
Sbjct: 420 EMRQPPMEKQPHQGISAYGREPPMNVHVSSAPPMVAQQVTQQMQIPLSYADAVIGTSGSN 479
Query: 576 LANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFI 621
++ R++SGAT+ + +++ G+ +SGT Q + A LIQ F+
Sbjct: 480 ISYTRRLSGATVTIQETRGVPGEMTVEVSGTGSQVQTAVQLIQNFM 525
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 100/193 (51%), Gaps = 16/193 (8%)
Query: 26 NEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVT 85
EK G ++R+L P +GS+IG+ G VI I +ETRAR+K++D PG +R V
Sbjct: 176 EEKRWPGWPGETVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAVM 235
Query: 86 IYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQIL 145
V KE+ E L + D LL+VH I + + + + K ++L
Sbjct: 236 ----VSGKEEPESS--------LPPSMDGLLRVHMRIVDGL-DGEASQAPPPSKVSTRLL 282
Query: 146 VPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVK 205
VP+SQ+ ++IGK G T+K ++ + ++V SE A++ D V + GE +V
Sbjct: 283 VPASQAGSLIGKQGGTVKAIQEASACIVRVL---GSEDLPVFALQDDRVVEVVGEPTSVH 339
Query: 206 KALFAISAIMYKF 218
+AL I++ + KF
Sbjct: 340 RALELIASHLRKF 352
>gi|395536911|ref|XP_003770452.1| PREDICTED: poly(rC)-binding protein 3 isoform 3 [Sarcophilus
harrisii]
Length = 318
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 93/322 (28%), Positives = 157/322 (48%), Gaps = 39/322 (12%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDD-- 365
L IR+L ++G +IGK G T+K +R+ SGA+I++ + N E ++T+T P D
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG---PTDAI 68
Query: 366 IKSMAVEAVLLLQTKINDEDDDT------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
K+ A+ A + IN + T VT+RL+V + G +IGK GS I EIR+ T
Sbjct: 69 FKAFAMIAYKFEEDIINSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 128
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGAD 479
A V+++ P ++ + V + G DA++Q + ++ L+ +PP GA
Sbjct: 129 AQVQVAGDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLE------SPPKGAT 175
Query: 480 HIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSM 539
Y P S P + G +A + G + L L+M +P+ +
Sbjct: 176 IPYR--------PKPASTPVIFAGG---QAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPL 224
Query: 540 SSYSSKLYG--GLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRG 597
+ G PP T E+ +P + +G +IG+ G+ + IR++SGA I+++++
Sbjct: 225 GQTTPAFPGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSS 284
Query: 598 DRVALISGTPEQKRAAENLIQA 619
+R I+GTP A+ LI A
Sbjct: 285 ERQITITGTPANISLAQYLINA 306
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 145/352 (41%), Gaps = 74/352 (21%)
Query: 29 DEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYS 88
E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R+VTI
Sbjct: 6 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTI-- 61
Query: 89 HVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIA--------NAVANATDNDKKRKEKE 140
DA+ K A IA N+++N+T K
Sbjct: 62 --------------------TGPTDAIFKAFAMIAYKFEEDIINSMSNSTATSKP---PV 98
Query: 141 ECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGE 200
+++VP+SQ ++IGK G+ IK +R T ++V T + V ISG
Sbjct: 99 TLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNST-------ERAVTISGT 151
Query: 201 SEAVKKALFAISAIMYKFSPR-EDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPIL 259
+A+ + + I +M + P+ IP P+ P+ GG A I
Sbjct: 152 PDAIIQCVKQICVVMLESPPKGATIPYRPK----------PASTPVIFAGG---QAYTIQ 198
Query: 260 PSRSVPSILGAARVPDL---QGYADTGNTWPVYSTGLSLVSGLVGA--SQSEELVIRVLC 314
++P PDL A +P GL + + + EL I
Sbjct: 199 GQYAIPH-------PDLTKLHQLAMQQTPFPPLGQTTPAFPGLDASPPASTHELTI---- 247
Query: 315 PFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
P + IG +IG+ G I IRQ SGAQI + + + E IT+T +P +I
Sbjct: 248 PNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITG--TPANI 297
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+TIRLL+ K +G IIGK G + ++R+ + A + IS+G+ P + +V + G
Sbjct: 13 TLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCP------ERIVTITGPTD 66
Query: 448 SVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
++ A I + +D ++ + + PPV
Sbjct: 67 AIFKAFAMIAYKFEEDIINSMSNSTATSKPPV 98
>gi|224123476|ref|XP_002319087.1| predicted protein [Populus trichocarpa]
gi|222857463|gb|EEE95010.1| predicted protein [Populus trichocarpa]
Length = 392
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 165/342 (48%), Gaps = 37/342 (10%)
Query: 41 ILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDD 100
+L P +GS+IG+ G+ I I +ETRAR+K++D PG +R V + + K++ D
Sbjct: 1 MLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMVSA--KEEPDSS--- 55
Query: 101 EFNDKEPLCAAQDALLKVHAAIANAV-ANATDNDKKRKEKEECQILVPSSQSANIIGKAG 159
L A D LL+VH I + + +++++ K ++LVP+SQ+ ++IGK G
Sbjct: 56 -------LPPAMDGLLRVHKRIIDGLDSDSSNTPPTSGAKVSTRLLVPASQAGSLIGKQG 108
Query: 160 ATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKF- 218
T+K ++ + ++V +E A++ D V + GE+ V KA+ I++ + KF
Sbjct: 109 GTVKSIQEASTCIVRVL---GAEDLPVFALQDDRVVEVLGEAAGVHKAVELIASHLRKFL 165
Query: 219 SPREDIPL-ETTVREAPPSI-IIPSDVPIYPPGGLYPN--------ADP--ILPSRSVPS 266
R IPL E ++ + PS+ +P PP L PN +P + P R + +
Sbjct: 166 VDRSIIPLFEMQMQMSNPSMEQMPPHQSWGPPQPLPPNHGGGPGYGQNPQYMPPPRQLDN 225
Query: 267 ILGAARVPDL------QGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIG 320
A +P L QG + G P+ S S + S ++ ++ P +
Sbjct: 226 YYPPADMPPLMEKQPHQGISAYGREAPMGSHASS--NAQAAPSMITQITQQMQIPLSYAD 283
Query: 321 RVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIES 362
VIG G +I IR+ASGA + + +T+ + ++ S
Sbjct: 284 AVIGTAGASISYIRRASGATVTIQETRGVPGAMTVEISGTAS 325
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 154/345 (44%), Gaps = 42/345 (12%)
Query: 312 VLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAV 371
+L P K+G +IG+ G IK I + + A+I + D E + V+A E PD A+
Sbjct: 1 MLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMVSAKEEPDSSLPPAM 60
Query: 372 EAVLLLQTKINDE-DDDT----------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTKA 420
+ +L + +I D D D+ V+ RLLV + G +IGK G + I++ +
Sbjct: 61 DGLLRVHKRIIDGLDSDSSNTPPTSGAKVSTRLLVPASQAGSLIGKQGGTVKSIQEASTC 120
Query: 421 DVRI-SKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDR----------- 468
VR+ D P A +D +VEV+GE V A+ I LR L DR
Sbjct: 121 IVRVLGAEDLPVFALQDDRVVEVLGEAAGVHKAVELIASHLRK-FLVDRSIIPLFEMQMQ 179
Query: 469 -----------DGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPL-GYDQRADSGSGIG 516
S PP + G G P +PP L Y AD +
Sbjct: 180 MSNPSMEQMPPHQSWGPPQPLPPNHGGGPGYGQNPQY--MPPPRQLDNYYPPADMPPLME 237
Query: 517 MLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNL 576
+ YG ++P GS +S +++ + +T ++ +P + VIG AG+++
Sbjct: 238 KQPHQGISAYGR----EAPMGSHASSNAQAAPSMITQITQQMQIPLSYADAVIGTAGASI 293
Query: 577 ANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFI 621
+ IR+ SGAT+ + +++ G ISGT Q + A+ LIQ F+
Sbjct: 294 SYIRRASGATVTIQETRGVPGAMTVEISGTASQVQTAQQLIQNFM 338
>gi|270007202|gb|EFA03650.1| hypothetical protein TcasGA2_TC013744 [Tribolium castaneum]
Length = 710
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 149/325 (45%), Gaps = 38/325 (11%)
Query: 298 GLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITV 357
GL G S+ + +R+L + +G +IG+ G TI+ I Q + A++DV KDN +
Sbjct: 278 GLPGQSRQTDFPLRILVQSDMVGAIIGRQGSTIRQITQQTRARVDVH-RKDNVGSLEKAI 336
Query: 358 TAIESPDDIKSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKR 417
T +P++ + + ++Q + N+ + + +++L + +IG IIGK G+ I I +
Sbjct: 337 TIYGNPENCTNACKRILEVMQQEANNTNKGEICLKILAHNNLIGRIIGKGGNTIKRIMQE 396
Query: 418 TKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVG 477
T + +S + + + ++ V G + ++ A QI +LR D
Sbjct: 397 TDTKITVSSINDINSFNL-ERIITVKGAIDNMSRAEAQISAKLRQSYENDLQ-------- 447
Query: 478 ADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYG 537
+M P P + P+ A GIG YG L G +PY
Sbjct: 448 -----------AMAPQTMMFPGLHPMAMMATA----GIG-------YGSRGLYTGQAPYP 485
Query: 538 SMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEM-----SDS 592
M + GG T + +P NAVG +IG GS++ NI + SGA++++ +
Sbjct: 486 GMYPAGAAQGGGDSQETTY-LYIPNNAVGAIIGTKGSHIRNIIRFSGASVKIAPIDETKP 544
Query: 593 KSSRGDRVALISGTPEQKRAAENLI 617
+ ++ +R I G+PE + A+ LI
Sbjct: 545 QETQNERRVTIVGSPEAQWKAQYLI 569
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 114/435 (26%), Positives = 192/435 (44%), Gaps = 91/435 (20%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDP-FPGAKDRVVTIYSHVKDKEDVEV 98
RIL ++G++IG+ G I I Q+TRARV V G+ ++ +TIY
Sbjct: 291 RILVQSDMVGAIIGRQGSTIRQITQQTRARVDVHRKDNVGSLEKAITIYG---------- 340
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEEC-QILVPSSQSANIIGK 157
+ E A +L+V AN + E C +IL ++ IIGK
Sbjct: 341 -----NPENCTNACKRILEVMQQEANNT----------NKGEICLKILAHNNLIGRIIGK 385
Query: 158 AGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYK 217
G TIKR+ +T T I V S + + + + G + + +A ISA + +
Sbjct: 386 GGNTIKRIMQETDTKITV-----SSINDINSFNLERIITVKGAIDNMSRAEAQISAKLRQ 440
Query: 218 FSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQ 277
S D+ AP +++ P GL+P A ++ A +
Sbjct: 441 -SYENDLQAM-----APQTMMFP---------GLHPMA-----------MMATAGI---- 470
Query: 278 GYADTGNTWPVYSTGLSLVSGL--VGASQ----SEELVIRVLCPFNKIGRVIGKGGGTIK 331
GY G +Y TG + G+ GA+Q S+E + P N +G +IG G I+
Sbjct: 471 GYGSRG----LY-TGQAPYPGMYPAGAAQGGGDSQETTY-LYIPNNAVGAIIGTKGSHIR 524
Query: 332 SIRQASGAQIDV---DDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKINDE---- 384
+I + SGA + + D+TK + VT + SP+ +A L+ K+ +E
Sbjct: 525 NIIRFSGASVKIAPIDETKPQETQNERRVTIVGSPE----AQWKAQYLIFEKMREEGFVA 580
Query: 385 --DDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRI-SKGDKPKCADANDELVE 441
DD +T+ ++V S +G IIGK G + E+++ T + +++ +G P+ ++ V
Sbjct: 581 GSDDVRLTVEIMVPSSQVGRIIGKGGQNVRELQRVTGSVIKLPEQGASPQ---EDETTVH 637
Query: 442 VVGEVGSVRDALVQI 456
++G SV+ A +I
Sbjct: 638 IIGPFFSVQSAQRRI 652
Score = 42.7 bits (99), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 33/42 (78%)
Query: 554 LTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSS 595
LT+E++VP++ VG++IGK G N+ +++++G+ I++ + +S
Sbjct: 587 LTVEIMVPSSQVGRIIGKGGQNVRELQRVTGSVIKLPEQGAS 628
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 48/90 (53%), Gaps = 7/90 (7%)
Query: 298 GLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITV 357
G V S L + ++ P +++GR+IGKGG ++ +++ +G+ I + + + E TV
Sbjct: 577 GFVAGSDDVRLTVEIMVPSSQVGRIIGKGGQNVRELQRVTGSVIKLPEQGASPQEDETTV 636
Query: 358 TAI-------ESPDDIKSMAVEAVLLLQTK 380
I + I++M +++V+ LQ +
Sbjct: 637 HIIGPFFSVQSAQRRIRAMVLQSVVPLQGR 666
>gi|226497902|ref|NP_001151605.1| nucleic acid binding protein [Zea mays]
gi|195648058|gb|ACG43497.1| nucleic acid binding protein [Zea mays]
Length = 524
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 96/388 (24%), Positives = 168/388 (43%), Gaps = 56/388 (14%)
Query: 3 DSGKRYRSQRDN------DRDGKNQKRRINEKDEKGNEESVIYRILCPDGVIGSVIGKSG 56
D Y+ + +N ++ G Q +++ G ++RIL P +G++IG+ G
Sbjct: 81 DPADSYQEEHENAFSGGINQQGNLQVNNVDDNIWPGWPGESVFRILVPAQKVGAIIGRKG 140
Query: 57 KVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALL 116
+ I + +ET+AR+K++D PG +R V I KD+ D PL A D LL
Sbjct: 141 EFIKKMCEETKARIKILDGPPGVPERAVMI--SAKDEPDA----------PLSPAMDGLL 188
Query: 117 KVHAAIANAVANATDNDKKRKEKE-----ECQILVPSSQSANIIGKAGATIKRLRSKTRT 171
+VH I +++D + + ++ ++LVPSSQ+ ++IGK GATIK ++ +++
Sbjct: 189 RVHKRI----TDSSDGESSQPQRSAGNIGPTRLLVPSSQAGSLIGKQGATIKSIQDSSKS 244
Query: 172 SIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKF-SPREDIPL-ETT 229
+++ E A+ D V I GE V+KA+ IS+ + KF R +PL E
Sbjct: 245 IVRIV-----ENVPPVALNDDRVVEIQGEPLGVQKAVELISSHLRKFLVDRSVLPLFEAH 299
Query: 230 VREAPPSIIIPSDVPIYPPGGLYPNADPI------------------LPSRSVPSILGAA 271
++ +P + P+ PP P I +P R S
Sbjct: 300 MKMH----GMPREQPVPPPQHWGPPQTWIRPPNIPPGGPGFGGNPQFMPPRPQDSYYPPP 355
Query: 272 RVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIK 331
V Y + +G S + ++ + P VIG G +I
Sbjct: 356 DVEKQPHYGISAYGREAPPSGASATGNQPPSHAGSQVAHDMHIPLAYADAVIGAAGASIS 415
Query: 332 SIRQASGAQIDVDDTKDNRDECVITVTA 359
IR+ SGA + + +++ + + +T
Sbjct: 416 YIRRHSGATVTIQESRGAPGDMTVEITG 443
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 100/349 (28%), Positives = 157/349 (44%), Gaps = 43/349 (12%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
E V R+L P K+G +IG+ G IK + + + A+I + D E + ++A + PD
Sbjct: 120 ESVFRILVPAQKVGAIIGRKGEFIKKMCEETKARIKILDGPPGVPERAVMISAKDEPDAP 179
Query: 367 KSMAVEAVLLLQTKINDEDDDTVT-----------IRLLVSSKVIGCIIGKSGSIINEIR 415
S A++ +L + +I D D + RLLV S G +IGK G+ I I+
Sbjct: 180 LSPAMDGLLRVHKRITDSSDGESSQPQRSAGNIGPTRLLVPSSQAGSLIGKQGATIKSIQ 239
Query: 416 KRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPP 475
+K+ VRI + + P A +D +VE+ GE V+ A+ I LR L DR P
Sbjct: 240 DSSKSIVRIVE-NVPPVALNDDRVVEIQGEPLGVQKAVELISSHLRK-FLVDRSVL---P 294
Query: 476 VGADHIYSSGTGISMPPLLPSIPP--VGPLGYDQRADSGSGIG---------MLSSSSLY 524
+ H+ G MP P PP GP R + G M
Sbjct: 295 LFEAHMKMHG----MPREQPVPPPQHWGPPQTWIRPPNIPPGGPGFGGNPQFMPPRPQDS 350
Query: 525 GYGSLSMGDSPYGSMSSYS-------SKLYGGLPP-----PLTLEVLVPANAVGKVIGKA 572
Y + P+ +S+Y + G PP + ++ +P VIG A
Sbjct: 351 YYPPPDVEKQPHYGISAYGREAPPSGASATGNQPPSHAGSQVAHDMHIPLAYADAVIGAA 410
Query: 573 GSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFI 621
G++++ IR+ SGAT+ + +S+ + GD I+GT Q + A+ LIQ F+
Sbjct: 411 GASISYIRRHSGATVTIQESRGAPGDMTVEITGTAAQVQTAQQLIQNFM 459
>gi|395536907|ref|XP_003770450.1| PREDICTED: poly(rC)-binding protein 3 isoform 1 [Sarcophilus
harrisii]
Length = 339
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 96/336 (28%), Positives = 155/336 (46%), Gaps = 46/336 (13%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDD-- 365
L IR+L ++G +IGK G T+K +R+ SGA+I++ + N E ++T+T P D
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG---PTDAI 68
Query: 366 IKSMAVEAVLLLQTKINDEDDDT------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
K+ A+ A + IN + T VT+RL+V + G +IGK GS I EIR+ T
Sbjct: 69 FKAFAMIAYKFEEDIINSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 128
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNP-PVGA 478
A V+++ P ++ + V + G ++ + QI + + + K P P
Sbjct: 129 AQVQVAGDMLP---NSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPAST 185
Query: 479 DHIYSSGTG--------ISMPPLLPSI-------PPVGPLGYDQRADSGSGIGMLSSSSL 523
I++ G I P L + P PLG A G + + SS
Sbjct: 186 PVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTTPAFPGEKLPLHSSEEA 245
Query: 524 YGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKIS 583
MG SP S PP T E+ +P + +G +IG+ G+ + IR++S
Sbjct: 246 QNL----MGQSPGLDAS----------PPASTHELTIPNDLIGCIIGRQGTKINEIRQMS 291
Query: 584 GATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQA 619
GA I+++++ +R I+GTP A+ LI A
Sbjct: 292 GAQIKIANATEGSSERQITITGTPANISLAQYLINA 327
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 94/364 (25%), Positives = 150/364 (41%), Gaps = 77/364 (21%)
Query: 29 DEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYS 88
E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R+VTI
Sbjct: 6 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTI-- 61
Query: 89 HVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIA--------NAVANATDNDKKRKEKE 140
DA+ K A IA N+++N+T K
Sbjct: 62 --------------------TGPTDAIFKAFAMIAYKFEEDIINSMSNSTATSKP---PV 98
Query: 141 ECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGE 200
+++VP+SQ ++IGK G+ IK +R T ++V T + V ISG
Sbjct: 99 TLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNST-------ERAVTISGT 151
Query: 201 SEAVKKALFAISAIMYKFSPR-EDIPLETTVREAPPSIIIPSDVPIYPPGGLY--PNADP 257
+A+ + + I +M + P+ IP P +I + Y G Y P+ D
Sbjct: 152 PDAIIQCVKQICVVMLESPPKGATIPYRPKPASTP---VIFAGGQAYTIQGQYAIPHPDQ 208
Query: 258 ILPSRSVPSILGAARVPDLQGYADTGNTWPVY-STGLSLVS-----GLVGAS-------- 303
+ L + P + G T P + L L S L+G S
Sbjct: 209 LTKLHQ----LAMQQTP----FPPLGQTTPAFPGEKLPLHSSEEAQNLMGQSPGLDASPP 260
Query: 304 -QSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIES 362
+ EL I P + IG +IG+ G I IRQ SGAQI + + + E IT+T +
Sbjct: 261 ASTHELTI----PNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITG--T 314
Query: 363 PDDI 366
P +I
Sbjct: 315 PANI 318
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+TIRLL+ K +G IIGK G + ++R+ + A + IS+G+ P + +V + G
Sbjct: 13 TLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCP------ERIVTITGPTD 66
Query: 448 SVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
++ A I + +D ++ + + PPV
Sbjct: 67 AIFKAFAMIAYKFEEDIINSMSNSTATSKPPV 98
>gi|242038781|ref|XP_002466785.1| hypothetical protein SORBIDRAFT_01g014200 [Sorghum bicolor]
gi|241920639|gb|EER93783.1| hypothetical protein SORBIDRAFT_01g014200 [Sorghum bicolor]
Length = 430
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 99/367 (26%), Positives = 164/367 (44%), Gaps = 56/367 (15%)
Query: 4 SGKRYRSQRDNDRDGKNQKRRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIR 63
SG +Q+DN +Q +++ G ++RIL P +G++IG+ G+ I +
Sbjct: 93 SGDPDMAQKDN-----SQVNNVDDDKWPGWPGESVFRILVPAQKVGAIIGRKGEFIKKMC 147
Query: 64 QETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIA 123
+ET+AR+K++D PG +R V I + KD+ D PL A D LL+VH I
Sbjct: 148 EETKARIKILDGPPGVPERAVMISA--KDEPDA----------PLSPAVDGLLRVHKRIT 195
Query: 124 NAVANATDNDKKRKEKE--ECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDAS 181
++ +N +R ++LVPSSQ+ ++IGK GATIK ++ +++ +++
Sbjct: 196 DS-SNGESGQLQRSAGNIGPTRLLVPSSQAGSLIGKQGATIKSIQDSSKSVVRIV----- 249
Query: 182 EPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKF-SPREDIPL-ETTVREAPPSIII 239
E A+ D V I GE V+KA+ I++ + KF R +PL ET ++ +
Sbjct: 250 ENVPPVALNDDRVVEIQGEPLGVQKAVELIASHLRKFLVDRSVLPLFETHMKMH----GM 305
Query: 240 PSDVPIYPPGGLYP------------------NADPILPSRSVPSILGAARVPDLQ---- 277
P + P+ PP P +P R S P ++
Sbjct: 306 PREQPVPPPQHWGPPQTWGPPPNIPPGGPGFGGNPQFIPPRPQDSYYPTPDAPAMEKQPH 365
Query: 278 -GYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQA 336
G + G P +G S + ++ + P N VIG G +I IR+
Sbjct: 366 YGISAYGREAP--PSGASATGNQPLSHAGSQVTHNMHIPLNYADAVIGAAGASISYIRRH 423
Query: 337 SGAQIDV 343
SGA + +
Sbjct: 424 SGATVTI 430
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 137/320 (42%), Gaps = 50/320 (15%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
E V R+L P K+G +IG+ G IK + + + A+I + D E + ++A + PD
Sbjct: 120 ESVFRILVPAQKVGAIIGRKGEFIKKMCEETKARIKILDGPPGVPERAVMISAKDEPDAP 179
Query: 367 KSMAVEAVLLLQTKINDEDD-----------DTVTIRLLVSSKVIGCIIGKSGSIINEIR 415
S AV+ +L + +I D + + RLLV S G +IGK G+ I I+
Sbjct: 180 LSPAVDGLLRVHKRITDSSNGESGQLQRSAGNIGPTRLLVPSSQAGSLIGKQGATIKSIQ 239
Query: 416 KRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPP 475
+K+ VRI + + P A +D +VE+ GE V+ A+ I LR L DR P
Sbjct: 240 DSSKSVVRIVE-NVPPVALNDDRVVEIQGEPLGVQKAVELIASHLR-KFLVDRSVL---P 294
Query: 476 VGADHIYSSGTGISMPPLLPS---------------------------IPPVGPLGYDQR 508
+ H+ G P P IPP Y
Sbjct: 295 LFETHMKMHGMPREQPVPPPQHWGPPQTWGPPPNIPPGGPGFGGNPQFIPPRPQDSYYPT 354
Query: 509 ADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKL-YGGLPPPLTLEVLVPANAVGK 567
D+ + + YG + P G+ ++ + L + G +T + +P N
Sbjct: 355 PDAPA----MEKQPHYGISAYGREAPPSGASATGNQPLSHAGS--QVTHNMHIPLNYADA 408
Query: 568 VIGKAGSNLANIRKISGATI 587
VIG AG++++ IR+ SGAT+
Sbjct: 409 VIGAAGASISYIRRHSGATV 428
>gi|413933627|gb|AFW68178.1| nucleic acid binding protein [Zea mays]
Length = 637
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 102/401 (25%), Positives = 173/401 (43%), Gaps = 81/401 (20%)
Query: 3 DSGKRYRSQRDNDRDGK-NQK-----RRINEKDEKGNEESVIYRILCPDGVIGSVIGKSG 56
D Y+ +++N G NQ+ +++ G ++RIL P +G++IG+ G
Sbjct: 191 DPADSYQEEQENAFSGGINQQDNLQVNNVDDNKWPGWPGESVFRILVPAQKVGAIIGRKG 250
Query: 57 KVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALL 116
+ I + +ET+AR+K++D PG +R V I KD+ D PL A D LL
Sbjct: 251 EFIKKMCEETKARIKILDGPPGVPERAVMI--SAKDEPDA----------PLSPAMDGLL 298
Query: 117 KVHAAIANAVANATDNDKKRKEKE-----ECQILVPSSQSANIIGKAGATIKRLRSKTRT 171
+VH I +++D + + ++ ++LVPSSQ+ ++IGK GATIK ++ +++
Sbjct: 299 RVHKRI----TDSSDGESSQPQRSAGNIGPTRLLVPSSQAGSLIGKQGATIKSIQDSSKS 354
Query: 172 SIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKF------------- 218
+++ E A+ D V I GE V++A+ IS+ + KF
Sbjct: 355 IVRIV-----ENVPPVALNDDRVVEIQGEPLGVQEAVELISSHLRKFLVDRSVLPLFEAH 409
Query: 219 -----SPREDIPLETTVREAPPSIII---------------PSDVPIYPPGGLYPNAD-P 257
PRE P+ PP I P + P YP+ D P
Sbjct: 410 MKMHGMPREQ-PVPPPQHWGPPQTWIRPPNIPPGGPGFGGNPQFMHPRPQDSYYPSPDVP 468
Query: 258 ILPSRSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFN 317
+ + I R G + TGN P ++ G+ + ++ I P
Sbjct: 469 HMEKQPHYGISAYGREAPPSGASATGNQPPSHA----------GSQVAHDMHI----PLA 514
Query: 318 KIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
VIG G +I IR+ SGA + + +++ E + +T
Sbjct: 515 YADAVIGAAGASISYIRRHSGATVTIQESRGAPGEMTVEIT 555
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 98/358 (27%), Positives = 159/358 (44%), Gaps = 58/358 (16%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
E V R+L P K+G +IG+ G IK + + + A+I + D E + ++A + PD
Sbjct: 230 ESVFRILVPAQKVGAIIGRKGEFIKKMCEETKARIKILDGPPGVPERAVMISAKDEPDAP 289
Query: 367 KSMAVEAVLLLQTKINDEDDDTVT-----------IRLLVSSKVIGCIIGKSGSIINEIR 415
S A++ +L + +I D D + RLLV S G +IGK G+ I I+
Sbjct: 290 LSPAMDGLLRVHKRITDSSDGESSQPQRSAGNIGPTRLLVPSSQAGSLIGKQGATIKSIQ 349
Query: 416 KRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPP 475
+K+ VRI + + P A +D +VE+ GE V++A+ I LR L DR P
Sbjct: 350 DSSKSIVRIVE-NVPPVALNDDRVVEIQGEPLGVQEAVELISSHLRK-FLVDRSVL---P 404
Query: 476 VGADHIYSSGTGISMPPLLPSIPP--VGP----------------------LGYDQRADS 511
+ H+ G MP P PP GP + + DS
Sbjct: 405 LFEAHMKMHG----MPREQPVPPPQHWGPPQTWIRPPNIPPGGPGFGGNPQFMHPRPQDS 460
Query: 512 ---GSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPP-----PLTLEVLVPAN 563
+ + YG + P G+ ++ G PP + ++ +P
Sbjct: 461 YYPSPDVPHMEKQPHYGISAYGREAPPSGASAT------GNQPPSHAGSQVAHDMHIPLA 514
Query: 564 AVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFI 621
VIG AG++++ IR+ SGAT+ + +S+ + G+ I+GT Q + A+ LIQ F+
Sbjct: 515 YADAVIGAAGASISYIRRHSGATVTIQESRGAPGEMTVEITGTAAQVQTAQQLIQNFM 572
>gi|356536806|ref|XP_003536925.1| PREDICTED: poly(rC)-binding protein 1-like [Glycine max]
Length = 561
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 96/375 (25%), Positives = 163/375 (43%), Gaps = 54/375 (14%)
Query: 21 QKRRINEKDEKGNE--------ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKV 72
+++R E+D KG E ++R+L P +GS+IG+ G+ I I ++T+AR+K+
Sbjct: 138 EEKRGPEEDLKGGEVKKWPGWPGENVFRMLVPVQKVGSIIGRKGEFIRKITEDTKARIKI 197
Query: 73 VDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCA---AQDALLKVHAAIANAVANA 129
+D PG +R V + + +EP C+ A D LL+VH + N +
Sbjct: 198 LDGPPGTSERAVMVSA---------------KEEPDCSIPPAVDGLLRVHKQVVNVDPHP 242
Query: 130 TDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAM 189
D+ ++LV +Q+ ++IGK G+TIK + T +I++ SE A+
Sbjct: 243 ADSASGAVRPVVTRLLVADTQAGSLIGKQGSTIKSFQDATGCNIRIL---GSEHLPVFAL 299
Query: 190 EFDNFVLISGESEAVKKALFAISAIMYKFSPREDI--PLETTVREAPPSIIIPSDVPIYP 247
D+ V I GES V KA+ ++ + KF I ET ++ P + +VP P
Sbjct: 300 RDDSIVEIQGESSGVHKAVELVAIHLRKFLVDRSIVGVFETQMQR--PDVRANQNVPPGP 357
Query: 248 PGGLY--------------------PNADPILPSRSVPSILGAARVPDLQGYADTGNTWP 287
P + PN + PS + + A + + + G P
Sbjct: 358 PHQPWGPPQGFPAPGPGSGGGPAFPPNTQYMPPSHNYDNYYPPADLSPMDKHLHQGPP-P 416
Query: 288 VYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTK 347
Y +S+ A + + + P + VIG G I IR+ASGA I + +T+
Sbjct: 417 AYVRDVSMGIHSSSAQAQQSVTQHMQIPLSYADAVIGASGANISYIRRASGASITIQETR 476
Query: 348 DNRDECVITVTAIES 362
E + ++ S
Sbjct: 477 GVPGEMTVEISGTAS 491
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 155/353 (43%), Gaps = 47/353 (13%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
E V R+L P K+G +IG+ G I+ I + + A+I + D E + V+A E PD
Sbjct: 161 ENVFRMLVPVQKVGSIIGRKGEFIRKITEDTKARIKILDGPPGTSERAVMVSAKEEPDCS 220
Query: 367 KSMAVEAVLLLQTKINDEDDDT----------VTIRLLVSSKVIGCIIGKSGSIINEIRK 416
AV+ +L + ++ + D V RLLV+ G +IGK GS I +
Sbjct: 221 IPPAVDGLLRVHKQVVNVDPHPADSASGAVRPVVTRLLVADTQAGSLIGKQGSTIKSFQD 280
Query: 417 RTKADVRISKGDK-PKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRD------ 469
T ++RI + P A +D +VE+ GE V A+ + + LR L DR
Sbjct: 281 ATGCNIRILGSEHLPVFALRDDSIVEIQGESSGVHKAVELVAIHLRK-FLVDRSIVGVFE 339
Query: 470 -GSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGS 528
+ P V A+ ++PP P P P G+ G ++ Y S
Sbjct: 340 TQMQRPDVRANQ--------NVPPGPPHQPWGPPQGFPAPGPGSGGGPAFPPNTQYMPPS 391
Query: 529 LSMGDS-PYGSMSSYSSKLYGGLPPP-------------------LTLEVLVPANAVGKV 568
+ + P +S L+ G PP +T + +P + V
Sbjct: 392 HNYDNYYPPADLSPMDKHLHQGPPPAYVRDVSMGIHSSSAQAQQSVTQHMQIPLSYADAV 451
Query: 569 IGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFI 621
IG +G+N++ IR+ SGA+I + +++ G+ ISGT Q +AA+ L+Q F+
Sbjct: 452 IGASGANISYIRRASGASITIQETRGVPGEMTVEISGTASQIQAAQQLVQNFM 504
>gi|291414465|ref|XP_002723480.1| PREDICTED: poly(rC) binding protein 2-like [Oryctolagus cuniculus]
Length = 319
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 157/323 (48%), Gaps = 40/323 (12%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDD-- 365
L IR+L ++G +IGK G T+K +R+ SGA+I++ + N E ++T+T P D
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG---PTDAI 68
Query: 366 IKSMAVEAVLLLQTKINDEDDDT------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
K+ A+ A + I+ + VT+RL+V + G +IGK GS I EIR+ T
Sbjct: 69 FKAFAMIAYKFEEDIISSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 128
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGAD 479
A V+++ P ++ + V + G DA++Q + ++ L+ +PP GA
Sbjct: 129 AQVQVAGDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLE------SPPKGAT 175
Query: 480 HIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSM 539
Y P+ PV + +A + G + L L+M +P+ +
Sbjct: 176 IPYRPK---------PASTPV--IFAGGQAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPL 224
Query: 540 SSYSSKLYGGL---PPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSR 596
+ GL PP T E+ +P + +G +IG+ G+ + IR++SGA I+++++
Sbjct: 225 GQTNPAFPAGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGS 284
Query: 597 GDRVALISGTPEQKRAAENLIQA 619
+R I+GTP A+ LI A
Sbjct: 285 SERQITITGTPANISLAQYLINA 307
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 144/344 (41%), Gaps = 57/344 (16%)
Query: 29 DEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYS 88
E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R+VTI
Sbjct: 6 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTI-- 61
Query: 89 HVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIA-----NAVANATDNDKKRKEKEECQ 143
DA+ K A IA + +++ +++ K +
Sbjct: 62 --------------------TGPTDAIFKAFAMIAYKFEEDIISSMSNSPATSKPPVTLR 101
Query: 144 ILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEA 203
++VP+SQ ++IGK G+ IK +R T ++V T + V ISG +A
Sbjct: 102 LVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNST-------ERAVTISGTPDA 154
Query: 204 VKKALFAISAIMYKFSPR-EDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSR 262
+ + + I +M + P+ IP P +I + Y G Y P L
Sbjct: 155 IIQCVKQICVVMLESPPKGATIPYRPKPASTP---VIFAGGQAYTIQGQYAIPHPDLTKL 211
Query: 263 SVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRV 322
L + P + G T P + GL + + EL I P + IG +
Sbjct: 212 HQ---LAMQQTP----FPPLGQTNPAFPAGLDASP----PASTHELTI----PNDLIGCI 256
Query: 323 IGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
IG+ G I IRQ SGAQI + + + E IT+T +P +I
Sbjct: 257 IGRQGTKINEIRQMSGAQIKIANATEGSSERQITITG--TPANI 298
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+TIRLL+ K +G IIGK G + ++R+ + A + IS+G+ P + +V + G
Sbjct: 13 TLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCP------ERIVTITGPTD 66
Query: 448 SVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
++ A I + +D ++ + + PPV
Sbjct: 67 AIFKAFAMIAYKFEEDIISSMSNSPATSKPPV 98
>gi|114684793|ref|XP_001157578.1| PREDICTED: poly(rC)-binding protein 3 isoform 2 [Pan troglodytes]
gi|397506694|ref|XP_003823856.1| PREDICTED: poly(rC)-binding protein 3 isoform 2 [Pan paniscus]
gi|426393343|ref|XP_004062984.1| PREDICTED: poly(rC)-binding protein 3 [Gorilla gorilla gorilla]
Length = 351
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 92/322 (28%), Positives = 154/322 (47%), Gaps = 38/322 (11%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDD-- 365
L IR+L ++G +IGK G T+K +R+ SGA+I++ + N E ++T+T P D
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG---PTDAI 100
Query: 366 IKSMAVEAVLLLQTKINDEDDDT------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
K+ A+ A + IN + VT+RL+V + G +IGK GS I EIR+ T
Sbjct: 101 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 160
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGAD 479
A V+++ GD ++ + V + G DA++Q + ++ L+ +PP GA
Sbjct: 161 AQVQVA-GDM--LPNSTERAVTISG----TPDAIIQCVKQICVVMLE------SPPKGAT 207
Query: 480 HIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSM 539
Y P+ PV G G + L L+M +P+ +
Sbjct: 208 IPYRPK---------PASTPVIFAGGQAYTIQGQ-YAIPHPDQLTKLHQLAMQQTPFPPL 257
Query: 540 SSYSSKLYG--GLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRG 597
+ G PP T E+ +P + +G +IG+ G+ + IR++SGA I+++++
Sbjct: 258 GQTNPAFPGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSS 317
Query: 598 DRVALISGTPEQKRAAENLIQA 619
+R I+GTP A+ LI A
Sbjct: 318 ERQITITGTPANISLAQYLINA 339
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 144/345 (41%), Gaps = 60/345 (17%)
Query: 23 RRINEK-DEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKD 81
RR+ K E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +
Sbjct: 31 RRMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPE 88
Query: 82 RVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIA-----NAVANATDNDKKR 136
R+VTI DA+ K A IA + + + +++
Sbjct: 89 RIVTI----------------------TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATS 126
Query: 137 KEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVL 196
K +++VP+SQ ++IGK G+ IK +R T ++V T + V
Sbjct: 127 KPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNST-------ERAVT 179
Query: 197 ISGESEAVKKALFAISAIMYKFSPR-EDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNA 255
ISG +A+ + + I +M + P+ IP P+ P+ GG A
Sbjct: 180 ISGTPDAIIQCVKQICVVMLESPPKGATIPYRPK----------PASTPVIFAGG---QA 226
Query: 256 DPILPSRSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGA--SQSEELVIRVL 313
I ++P ++ L A +P GL + + + EL I
Sbjct: 227 YTIQGQYAIPH---PDQLTKLHQLAMQQTPFPPLGQTNPAFPGLDASPPASTHELTI--- 280
Query: 314 CPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
P + IG +IG+ G I IRQ SGAQI + + + E IT+T
Sbjct: 281 -PNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITIT 324
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+TIRLL+ K +G IIGK G + ++R+ + A + IS+G+ P + +V + G
Sbjct: 45 TLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCP------ERIVTITGPTD 98
Query: 448 SVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
++ A I + +D ++ + + PPV
Sbjct: 99 AIFKAFAMIAYKFEEDIINSMSNSPATSKPPV 130
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 40/66 (60%), Gaps = 3/66 (4%)
Query: 302 ASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDV-DDTKDNRDECVITVTAI 360
A+ + +R++ P ++ G +IGKGG IK IR+++GAQ+ V D N E +T++
Sbjct: 124 ATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISG- 182
Query: 361 ESPDDI 366
+PD I
Sbjct: 183 -TPDAI 187
>gi|356572245|ref|XP_003554280.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 528
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 98/373 (26%), Positives = 164/373 (43%), Gaps = 51/373 (13%)
Query: 23 RRINEKDEKGNE--------ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVD 74
++ +E D KGNE ++R+L P +GS+IG+ G+ I I +ET+AR+K++D
Sbjct: 103 KQGSEIDSKGNEIKKWPGWPGENVFRMLVPVQKVGSIIGRKGEFIKKITEETKARIKILD 162
Query: 75 PFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDK 134
PG +R V + + K++ D P+ A D LL+VH + N + D+
Sbjct: 163 GPPGISERAVMVSA--KEEPDC----------PIPPAVDGLLRVHKQVINVDRDLADSAL 210
Query: 135 KRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNF 194
++LV +Q+ ++IGK G+TIK ++ + +I+V SE A+ D+
Sbjct: 211 AAGRSVVTRLLVADTQAGSLIGKQGSTIKSIQDGSGCTIRVL---GSENLPIFALRDDSI 267
Query: 195 VLISGESEAVKKALFAISAIMYKFSPREDI--PLETTVREAPPSIIIPSDVPIYPPGGLY 252
V I GES V KA+ I+ + KF I ET ++ + + + ++P + G
Sbjct: 268 VEIQGESAGVHKAVELIAVHLRKFLVDRSIVGVFETQMQMS--DVRVNQNLPPHQNWGPP 325
Query: 253 P-------------------NADPILPSRSVPSILGAARVPDLQGYADTGNTWPVYSTGL 293
P N + PS S +P + + G P Y+
Sbjct: 326 PQGFPAPAGGGGGGGPAFAPNHQYMPPSHHYDSYYPPTELPPMDKHLHQGPP-PAYARDA 384
Query: 294 SLVSGLVGASQSEELVIRVL----CPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDN 349
S+ A + +V +V P VIG G I IR+ASGA I + +T+
Sbjct: 385 SMGIHSSSAQPQQSVVTKVTQHMQIPLTYADAVIGASGTNISYIRRASGASITIQETRGV 444
Query: 350 RDECVITVTAIES 362
E + ++ S
Sbjct: 445 PGEMTVEISGTSS 457
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 101/225 (44%), Gaps = 18/225 (8%)
Query: 249 GGLYPNADPILPSRSVPSILGAARVP-DLQGYADTGNTWPVYSTGLSLVSGLVGASQSEE 307
GGL +AD P V + GA VP D G+ + G G E
Sbjct: 71 GGLAGDAD-SPPEEHVEEVHGAGDVPEDFDSLPKQGSEIDSKGNEIKKWPGWPG-----E 124
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
V R+L P K+G +IG+ G IK I + + A+I + D E + V+A E PD
Sbjct: 125 NVFRMLVPVQKVGSIIGRKGEFIKKITEETKARIKILDGPPGISERAVMVSAKEEPDCPI 184
Query: 368 SMAVEAVLLLQTKINDEDDD----------TVTIRLLVSSKVIGCIIGKSGSIINEIRKR 417
AV+ +L + ++ + D D +V RLLV+ G +IGK GS I I+
Sbjct: 185 PPAVDGLLRVHKQVINVDRDLADSALAAGRSVVTRLLVADTQAGSLIGKQGSTIKSIQDG 244
Query: 418 TKADVRISKGDK-PKCADANDELVEVVGEVGSVRDALVQIILRLR 461
+ +R+ + P A +D +VE+ GE V A+ I + LR
Sbjct: 245 SGCTIRVLGSENLPIFALRDDSIVEIQGESAGVHKAVELIAVHLR 289
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 42/68 (61%)
Query: 554 LTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAA 613
+T + +P VIG +G+N++ IR+ SGA+I + +++ G+ ISGT Q +AA
Sbjct: 403 VTQHMQIPLTYADAVIGASGTNISYIRRASGASITIQETRGVPGEMTVEISGTSSQIQAA 462
Query: 614 ENLIQAFI 621
+ L+Q F+
Sbjct: 463 QQLVQNFM 470
>gi|403297205|ref|XP_003939469.1| PREDICTED: poly(rC)-binding protein 3 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 351
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 91/322 (28%), Positives = 153/322 (47%), Gaps = 38/322 (11%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDD-- 365
L IR+L ++G +IGK G T+K +R+ SGA+I++ + N E ++T+T P D
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG---PTDAI 100
Query: 366 IKSMAVEAVLLLQTKINDEDDDT------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
K+ A+ A + IN + VT+RL+V + G +IGK GS I EIR+ T
Sbjct: 101 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 160
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGAD 479
A V+++ P ++ + V + G DA++Q + ++ L+ +PP GA
Sbjct: 161 AQVQVAGDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLE------SPPKGAT 207
Query: 480 HIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSM 539
Y P+ PV G G + L L+M +P+ +
Sbjct: 208 IPYRPK---------PASTPVIFAGGQAYTIQGQ-YAIPHPDQLTKLHQLAMQQTPFPPL 257
Query: 540 SSYSSKLYG--GLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRG 597
+ G PP T E+ +P + +G +IG+ G+ + IR++SGA I+++++
Sbjct: 258 GQTNPAFPGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSS 317
Query: 598 DRVALISGTPEQKRAAENLIQA 619
+R I+GTP A+ LI A
Sbjct: 318 ERQITITGTPANISLAQYLINA 339
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 144/345 (41%), Gaps = 60/345 (17%)
Query: 23 RRINEK-DEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKD 81
RR+ K E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +
Sbjct: 31 RRMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPE 88
Query: 82 RVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIA-----NAVANATDNDKKR 136
R+VTI DA+ K A IA + + + +++
Sbjct: 89 RIVTI----------------------TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATS 126
Query: 137 KEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVL 196
K +++VP+SQ ++IGK G+ IK +R T ++V T + V
Sbjct: 127 KPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNST-------ERAVT 179
Query: 197 ISGESEAVKKALFAISAIMYKFSPR-EDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNA 255
ISG +A+ + + I +M + P+ IP P+ P+ GG A
Sbjct: 180 ISGTPDAIIQCVKQICVVMLESPPKGATIPYRPK----------PASTPVIFAGG---QA 226
Query: 256 DPILPSRSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGA--SQSEELVIRVL 313
I ++P ++ L A +P GL + + + EL I
Sbjct: 227 YTIQGQYAIPH---PDQLTKLHQLAMQQTPFPPLGQTNPAFPGLDASPPASTHELTI--- 280
Query: 314 CPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
P + IG +IG+ G I IRQ SGAQI + + + E IT+T
Sbjct: 281 -PNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITIT 324
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+TIRLL+ K +G IIGK G + ++R+ + A + IS+G+ P + +V + G
Sbjct: 45 TLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCP------ERIVTITGPTD 98
Query: 448 SVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
++ A I + +D ++ + + PPV
Sbjct: 99 AIFKAFAMIAYKFEEDIINSMSNSPATSKPPV 130
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 40/66 (60%), Gaps = 3/66 (4%)
Query: 302 ASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDV-DDTKDNRDECVITVTAI 360
A+ + +R++ P ++ G +IGKGG IK IR+++GAQ+ V D N E +T++
Sbjct: 124 ATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISG- 182
Query: 361 ESPDDI 366
+PD I
Sbjct: 183 -TPDAI 187
>gi|426218397|ref|XP_004003433.1| PREDICTED: poly(rC)-binding protein 3 isoform 2 [Ovis aries]
Length = 319
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 151/324 (46%), Gaps = 42/324 (12%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDD-- 365
L IR+L ++G +IGK G T+K +R+ SGA+I++ + N E ++T+T P D
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG---PTDAI 68
Query: 366 IKSMAVEAVLLLQTKINDEDDDT------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
K+ A+ A + IN + VT+RL+V + G +IGK GS I EIR+ T
Sbjct: 69 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 128
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNP-PVGA 478
A V+++ P ++ + V + G ++ + QI + + + K P P
Sbjct: 129 AQVQVAGDMLP---NSTERAVTISGTPDAIIQCVKQICVVMLESPRKGVTVVVAPKPAST 185
Query: 479 DHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGS 538
I++ G +A + G + L L+M +P+
Sbjct: 186 PVIFAGG----------------------QAYTIQGQYAIPHPDLTKLHQLAMQQTPFPP 223
Query: 539 MSSYSSKLYGGL---PPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSS 595
+ + GL PP T E+ +P + +G +IG+ G+ + IR++SGA I+++++
Sbjct: 224 LGQTNPAFPAGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEG 283
Query: 596 RGDRVALISGTPEQKRAAENLIQA 619
+R I+GTP A+ LI A
Sbjct: 284 SSERQITITGTPANISLAQYLINA 307
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 150/353 (42%), Gaps = 75/353 (21%)
Query: 29 DEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYS 88
E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R+VTI
Sbjct: 6 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTI-- 61
Query: 89 HVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIA-----NAVANATDNDKKRKEKEECQ 143
DA+ K A IA + + + +++ K +
Sbjct: 62 --------------------TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLR 101
Query: 144 ILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEA 203
++VP+SQ ++IGK G+ IK +R T ++V T + V ISG +A
Sbjct: 102 LVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNST-------ERAVTISGTPDA 154
Query: 204 VKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRS 263
+ + + I +M + SPR+ + TV AP P+ P+ GG A I +
Sbjct: 155 IIQCVKQICVVMLE-SPRKGV----TVVVAPK----PASTPVIFAGG---QAYTIQGQYA 202
Query: 264 VPSILGAARVPDLQG----------YADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVL 313
+P PDL + G T P + GL + + EL I
Sbjct: 203 IPH-------PDLTKLHQLAMQQTPFPPLGQTNPAFPAGLDASP----PASTHELTI--- 248
Query: 314 CPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
P + IG +IG+ G I IRQ SGAQI + + + E IT+T +P +I
Sbjct: 249 -PNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITG--TPANI 298
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+TIRLL+ K +G IIGK G + ++R+ + A + IS+G+ P + +V + G
Sbjct: 13 TLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCP------ERIVTITGPTD 66
Query: 448 SVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
++ A I + +D ++ + + PPV
Sbjct: 67 AIFKAFAMIAYKFEEDIINSMSNSPATSKPPV 98
>gi|193248243|dbj|BAC04327.2| unnamed protein product [Homo sapiens]
Length = 319
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 91/322 (28%), Positives = 153/322 (47%), Gaps = 38/322 (11%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDD-- 365
L IR+L ++G +IGK G T+K +R+ SGA+I++ + N E ++T+T P D
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG---PTDAI 68
Query: 366 IKSMAVEAVLLLQTKINDEDDDT------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
K+ A+ A + IN + VT+RL+V + G +IGK GS I EIR+ T
Sbjct: 69 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 128
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGAD 479
A V+++ P ++ + V + G DA++Q + ++ L+ +PP GA
Sbjct: 129 AQVQVAGDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLE------SPPKGAT 175
Query: 480 HIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSM 539
Y P+ PV G G + L L+M +P+ +
Sbjct: 176 IPYRPK---------PASTPVIFAGGQAYTIQGQ-YAIPHPDQLTKLHQLAMQQTPFPPL 225
Query: 540 SSYSSKLYG--GLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRG 597
+ G PP T E+ +P + +G +IG+ G+ + IR++SGA I+++++
Sbjct: 226 GQTNPAFPGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSS 285
Query: 598 DRVALISGTPEQKRAAENLIQA 619
+R I+GTP A+ LI A
Sbjct: 286 ERQITITGTPANISLAQYLINA 307
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 144/346 (41%), Gaps = 61/346 (17%)
Query: 29 DEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYS 88
E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R+VTI
Sbjct: 6 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTI-- 61
Query: 89 HVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIA-----NAVANATDNDKKRKEKEECQ 143
DA+ K A IA + + + +++ K +
Sbjct: 62 --------------------TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLR 101
Query: 144 ILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEA 203
++VP+SQ ++IGK G+ IK +R T ++V T + V ISG +A
Sbjct: 102 LVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNST-------ERAVTISGTPDA 154
Query: 204 VKKALFAISAIMYKFSPR-EDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSR 262
+ + + I +M + P+ IP P+ P+ GG A I
Sbjct: 155 IIQCVKQICVVMLESPPKGATIPYRPK----------PASTPVIFAGG---QAYTIQGQY 201
Query: 263 SVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGA--SQSEELVIRVLCPFNKIG 320
++P ++ L A +P GL + + + EL I P + IG
Sbjct: 202 AIPH---PDQLTKLHQLAMQQTPFPPLGQTNPAFPGLDASPPASTHELTI----PNDLIG 254
Query: 321 RVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
+IG+ G I IRQ SGAQI + + + E IT+T +P +I
Sbjct: 255 CIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITG--TPANI 298
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+TIRLL+ K +G IIGK G + ++R+ + A + IS+G+ P + +V + G
Sbjct: 13 TLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCP------ERIVTITGPTD 66
Query: 448 SVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
++ A I + +D ++ + + PPV
Sbjct: 67 AIFKAFAMIAYKFEEDIINSMSNSPATSKPPV 98
>gi|58865460|ref|NP_001011945.1| poly(rC)-binding protein 3 [Rattus norvegicus]
gi|50927011|gb|AAH79196.1| Poly(rC) binding protein 3 [Rattus norvegicus]
Length = 319
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 91/322 (28%), Positives = 153/322 (47%), Gaps = 38/322 (11%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDD-- 365
L IR+L ++G +IGK G T+K +R+ SGA+I++ + N E ++T+T P D
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG---PTDAI 68
Query: 366 IKSMAVEAVLLLQTKINDEDDDT------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
K+ A+ A + IN + VT+RL+V + G +IGK GS I EIR+ T
Sbjct: 69 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 128
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGAD 479
A V+++ P ++ + V + G DA++Q + ++ L+ +PP GA
Sbjct: 129 AQVQVAGDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLE------SPPKGAT 175
Query: 480 HIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSM 539
Y P+ PV G G + L L+M +P+ +
Sbjct: 176 IPYRPK---------PASTPVIFAGGQAYTIQGQ-YAIPHPDQLTKLHQLAMQQTPFPPL 225
Query: 540 SSYSSKLYG--GLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRG 597
+ G PP T E+ +P + +G +IG+ G+ + IR++SGA I+++++
Sbjct: 226 GQTNPAFPGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSS 285
Query: 598 DRVALISGTPEQKRAAENLIQA 619
+R I+GTP A+ LI A
Sbjct: 286 ERQITITGTPANISLAQYLINA 307
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 144/346 (41%), Gaps = 61/346 (17%)
Query: 29 DEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYS 88
E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R+VTI
Sbjct: 6 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTI-- 61
Query: 89 HVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIA-----NAVANATDNDKKRKEKEECQ 143
DA+ K A IA + + + +++ K +
Sbjct: 62 --------------------TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLR 101
Query: 144 ILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEA 203
++VP+SQ ++IGK G+ IK +R T ++V T + V ISG +A
Sbjct: 102 LVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNST-------ERAVTISGTPDA 154
Query: 204 VKKALFAISAIMYKFSPR-EDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSR 262
+ + + I +M + P+ IP P+ P+ GG A I
Sbjct: 155 IIQCVKQICVVMLESPPKGATIPYRPK----------PASTPVIFAGG---QAYTIQGQY 201
Query: 263 SVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGA--SQSEELVIRVLCPFNKIG 320
++P ++ L A +P GL + + + EL I P + IG
Sbjct: 202 AIPH---PDQLTKLHQLAMQQTPFPPLGQTNPAFPGLDASPPASTHELTI----PNDLIG 254
Query: 321 RVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
+IG+ G I IRQ SGAQI + + + E IT+T +P +I
Sbjct: 255 CIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITG--TPANI 298
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+TIRLL+ K +G IIGK G + ++R+ + A + IS+G+ P + +V + G
Sbjct: 13 TLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCP------ERIVTITGPTD 66
Query: 448 SVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
++ A I + +D ++ + + PPV
Sbjct: 67 AIFKAFAMIAYKFEEDIINSMSNSPATSKPPV 98
>gi|432931639|ref|XP_004081713.1| PREDICTED: poly(rC)-binding protein 3-like isoform 2 [Oryzias
latipes]
Length = 343
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 157/324 (48%), Gaps = 20/324 (6%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDD-- 365
L IR+L ++G +IGK G T+K +R+ SGA+I++ + N E ++T+T P D
Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG---PTDTI 70
Query: 366 IKSMAVEAVLLLQTKINDEDDDT------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
K+ A+ A + IN + VT+RL+V + G +IGK GS I E+R+ T
Sbjct: 71 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTG 130
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGAD 479
A V+++ P ++ + V + G ++ + QI + + + K P +
Sbjct: 131 AQVQVAGDMLP---NSTERAVTISGTPEAIIQCVKQICVVMLESPPKGATIPYRPKPAST 187
Query: 480 HIYSSGTGISMPPLLPSIPPVGPLGYDQR--ADSGSGIGMLSSSSLYGYGSLSMGDSPYG 537
+ SG +S L ++ P L Q+ A + G + L L+M +P+
Sbjct: 188 PVIFSGGQVSAELLKTTLTPNLTLLMQQKCPAYTIQGQYAIPHPDLTKLHQLAMQQTPFT 247
Query: 538 SMSSYSSKLYG--GLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSS 595
+ + G PP T E+ +P + +G +IG+ G+ + IR++SGA I+++++
Sbjct: 248 PLGQTTPAFPGLDAAPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAMEG 307
Query: 596 RGDRVALISGTPEQKRAAENLIQA 619
+R I+GTP A+ LI A
Sbjct: 308 SSERQITITGTPANISLAQYLINA 331
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 88/367 (23%), Positives = 146/367 (39%), Gaps = 79/367 (21%)
Query: 28 KDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIY 87
+ E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R+VTI
Sbjct: 7 QSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTI- 63
Query: 88 SHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIA-----NAVANATDNDKKRKEKEEC 142
D + K A IA + + + +++ K
Sbjct: 64 ---------------------TGPTDTIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTL 102
Query: 143 QILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESE 202
+++VP+SQ ++IGK G+ IK +R T ++V T + V ISG E
Sbjct: 103 RLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVAGDMLPNST-------ERAVTISGTPE 155
Query: 203 AVKKALFAISAIMYKFSPR-EDIPLETTVREAP--------------------PSIIIPS 241
A+ + + I +M + P+ IP P ++++
Sbjct: 156 AIIQCVKQICVVMLESPPKGATIPYRPKPASTPVIFSGGQVSAELLKTTLTPNLTLLMQQ 215
Query: 242 DVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVG 301
P Y G Y P L L + P + G T P + GL
Sbjct: 216 KCPAYTIQGQYAIPHPDLTKLHQ---LAMQQTP----FTPLGQTTPAFP-------GLDA 261
Query: 302 A--SQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTA 359
A + + EL I P + IG +IG+ G I IRQ SGAQI + + + E IT+T
Sbjct: 262 APPASTHELTI----PNDLIGCIIGRQGTKINEIRQMSGAQIKIANAMEGSSERQITITG 317
Query: 360 IESPDDI 366
+P +I
Sbjct: 318 --TPANI 322
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 54/103 (52%), Gaps = 11/103 (10%)
Query: 379 TKINDED--DDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADAN 436
TK+ E + T+TIRLL+ K +G IIGK G + ++R+ + A + IS+G+ P
Sbjct: 4 TKVQSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCP------ 57
Query: 437 DELVEVVGEVGSVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
+ +V + G ++ A I + +D ++ + + PPV
Sbjct: 58 ERIVTITGPTDTIFKAFAMIAYKFEEDIINSMSNSPATSKPPV 100
>gi|327260862|ref|XP_003215252.1| PREDICTED: poly(rC)-binding protein 3-like [Anolis carolinensis]
Length = 339
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 155/339 (45%), Gaps = 52/339 (15%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDD-- 365
L IR+L ++G +IGK G T+K +R+ SGA+I++ + N E ++T+T P D
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG---PTDAI 68
Query: 366 IKSMAVEAVLLLQTKINDEDDDT------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
K+ A+ A + IN + T VT+RL+V + G +IGK GS I EIR+ T
Sbjct: 69 FKAFAMIAYKFEEDIINSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 128
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNP-PVGA 478
A V+++ P ++ + V + G ++ + QI + + + K P P
Sbjct: 129 AQVQVAGDMLP---NSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPAST 185
Query: 479 DHIYSSGTG--------ISMPPLLPSI-------PPVGPLGYDQRADSGSGIGMLSSSSL 523
I++ G I P L + P PLG A G + + SS
Sbjct: 186 PVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFTPLGQTTPAFPGEKLPLHSSEEA 245
Query: 524 YGYGSLSMGDSPYGSMSSYSSKLYGGL---PPPLTLEVLVPANAVGKVIGKAGSNLANIR 580
MG S GL PP T E+ +P + +G +IG+ G+ + IR
Sbjct: 246 QNL----MGQS-------------SGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIR 288
Query: 581 KISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQA 619
++SGA I+++++ +R I+GTP A+ LI A
Sbjct: 289 QMSGAQIKIANATEGSSERQITITGTPANISLAQYLINA 327
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 95/362 (26%), Positives = 154/362 (42%), Gaps = 73/362 (20%)
Query: 29 DEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYS 88
E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R+VTI
Sbjct: 6 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTI-- 61
Query: 89 HVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIA--------NAVANATDNDKKRKEKE 140
DA+ K A IA N+++N+T K
Sbjct: 62 --------------------TGPTDAIFKAFAMIAYKFEEDIINSMSNSTATSKP---PV 98
Query: 141 ECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGE 200
+++VP+SQ ++IGK G+ IK +R T ++V T + V ISG
Sbjct: 99 TLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNST-------ERAVTISGT 151
Query: 201 SEAVKKALFAISAIMYKFSPR-EDIPLETTVREAPPSI-IIPSDVPIYPPGGLY--PNAD 256
+A+ + + I +M + P+ IP R P S +I + Y G Y P+ D
Sbjct: 152 PDAIIQCVKQICVVMLESPPKGATIPY----RPKPASTPVIFAGGQAYTIQGQYAIPHPD 207
Query: 257 PI-----LPSRSVPSILGAARVPDLQGYADTGNTWPVYSTG-----LSLVSGLVGA--SQ 304
+ L + P P A G P++S+ + SGL + +
Sbjct: 208 QLTKLHQLAMQQTPFTPLGQTTP-----AFPGEKLPLHSSEEAQNLMGQSSGLDASPPAS 262
Query: 305 SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPD 364
+ EL I P + IG +IG+ G I IRQ SGAQI + + + E IT+T +P
Sbjct: 263 THELTI----PNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITG--TPA 316
Query: 365 DI 366
+I
Sbjct: 317 NI 318
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+TIRLL+ K +G IIGK G + ++R+ + A + IS+G+ P + +V + G
Sbjct: 13 TLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCP------ERIVTITGPTD 66
Query: 448 SVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
++ A I + +D ++ + + PPV
Sbjct: 67 AIFKAFAMIAYKFEEDIINSMSNSTATSKPPV 98
>gi|395536909|ref|XP_003770451.1| PREDICTED: poly(rC)-binding protein 3 isoform 2 [Sarcophilus
harrisii]
Length = 361
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 93/344 (27%), Positives = 159/344 (46%), Gaps = 40/344 (11%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDD-- 365
L IR+L ++G +IGK G T+K +R+ SGA+I++ + N E ++T+T P D
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG---PTDAI 68
Query: 366 IKSMAVEAVLLLQTKINDEDDDT------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
K+ A+ A + IN + T VT+RL+V + G +IGK GS I EIR+ T
Sbjct: 69 FKAFAMIAYKFEEDIINSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 128
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGAD 479
A V+++ GD ++ + V + G ++ + QI + + + K P +
Sbjct: 129 AQVQVA-GD--MLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPAST 185
Query: 480 HIYSSGTGISMPPLLPSIPPVGPLGYDQ--RADSGSGIGMLSSSSLYGYGSLSMGDSPYG 537
+ +G + PL S + L Q A + G + L L+M +P+
Sbjct: 186 PVIFAGGQVRADPLAASTANLSLLLQHQPLPAYTIQGQYAIPHPDLTKLHQLAMQQTPFP 245
Query: 538 SMSSYSSKLYG-------------------GL---PPPLTLEVLVPANAVGKVIGKAGSN 575
+ + G GL PP T E+ +P + +G +IG+ G+
Sbjct: 246 PLGQTTPAFPGEKLPLHSSEEAQNLMGQSPGLDASPPASTHELTIPNDLIGCIIGRQGTK 305
Query: 576 LANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQA 619
+ IR++SGA I+++++ +R I+GTP A+ LI A
Sbjct: 306 INEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINA 349
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 97/378 (25%), Positives = 151/378 (39%), Gaps = 97/378 (25%)
Query: 29 DEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYS 88
E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R+VTI
Sbjct: 6 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTI-- 61
Query: 89 HVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIA--------NAVANATDNDKKRKEKE 140
DA+ K A IA N+++N+T K
Sbjct: 62 --------------------TGPTDAIFKAFAMIAYKFEEDIINSMSNSTATSKP---PV 98
Query: 141 ECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGE 200
+++VP+SQ ++IGK G+ IK +R T ++V T + V ISG
Sbjct: 99 TLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNST-------ERAVTISGT 151
Query: 201 SEAVKKALFAISAIMYKFSPR-EDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPIL 259
+A+ + + I +M + P+ IP P+ P+ GG ADP+
Sbjct: 152 PDAIIQCVKQICVVMLESPPKGATIPYRPK----------PASTPVIFAGGQV-RADPLA 200
Query: 260 PSRSVPSIL--------------GAARVPDLQG----------YADTGNTWPVY-STGLS 294
S + S+L A PDL + G T P + L
Sbjct: 201 ASTANLSLLLQHQPLPAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTTPAFPGEKLP 260
Query: 295 LVS-----GLVGAS---------QSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQ 340
L S L+G S + EL I P + IG +IG+ G I IRQ SGAQ
Sbjct: 261 LHSSEEAQNLMGQSPGLDASPPASTHELTI----PNDLIGCIIGRQGTKINEIRQMSGAQ 316
Query: 341 IDVDDTKDNRDECVITVT 358
I + + + E IT+T
Sbjct: 317 IKIANATEGSSERQITIT 334
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+TIRLL+ K +G IIGK G + ++R+ + A + IS+G+ P + +V + G
Sbjct: 13 TLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCP------ERIVTITGPTD 66
Query: 448 SVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
++ A I + +D ++ + + PPV
Sbjct: 67 AIFKAFAMIAYKFEEDIINSMSNSTATSKPPV 98
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 40/66 (60%), Gaps = 3/66 (4%)
Query: 302 ASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDV-DDTKDNRDECVITVTAI 360
A+ + +R++ P ++ G +IGKGG IK IR+++GAQ+ V D N E +T++
Sbjct: 92 ATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISG- 150
Query: 361 ESPDDI 366
+PD I
Sbjct: 151 -TPDAI 155
>gi|361066699|gb|AEW07661.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
Length = 139
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 92/150 (61%), Gaps = 13/150 (8%)
Query: 93 KEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKE-KEECQILVPSSQS 151
KE + +D+ ++ EP+C AQDALL+VH+ IA + + K+ ++ ++LV +SQ
Sbjct: 1 KEKEKDNDDGDENEPICPAQDALLRVHSVIAQESSAKDKDSDADKKGQQNARLLVANSQI 60
Query: 152 ANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAI 211
++IGK G I+++R+++ I++ KD CA FD V+ISG++ AVKKAL+A+
Sbjct: 61 GSLIGKGGNNIQKMRTESGAQIQIPRKDE---LPGCAFSFDELVVISGDATAVKKALYAV 117
Query: 212 SAIMYKFSPREDIPLETTVREAPPSIIIPS 241
SA +YK P+E IP S+I+P+
Sbjct: 118 SAFLYKHLPKEQIPW---------SLILPA 138
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 392 RLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDK-PKCADANDELVEVVGEVGSVR 450
RLLV++ IG +IGK G+ I ++R + A ++I + D+ P CA + DELV + G+ +V+
Sbjct: 52 RLLVANSQIGSLIGKGGNNIQKMRTESGAQIQIPRKDELPGCAFSFDELVVISGDATAVK 111
Query: 451 DALVQI 456
AL +
Sbjct: 112 KALYAV 117
>gi|301604860|ref|XP_002932078.1| PREDICTED: poly(rC)-binding protein 3-like [Xenopus (Silurana)
tropicalis]
Length = 339
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 95/336 (28%), Positives = 156/336 (46%), Gaps = 46/336 (13%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDD-- 365
L IR+L ++G +IGK G T+K +R+ SGA+I++ + N E ++T+T P D
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG---PTDAI 68
Query: 366 IKSMAVEAVLLLQTKINDEDDDT------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
K+ A+ A + IN + T VT+RL+V + G +IGK GS I EIR+ T
Sbjct: 69 FKAFAMIAYKFEEDIINSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 128
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNP-PVGA 478
A V+++ P ++ + V + G ++ + QI + + + K P P A
Sbjct: 129 AQVQVAGDMLP---NSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASA 185
Query: 479 DHIYSSGTGISM--------PPLLPSI-------PPVGPLGYDQRADSGSGIGMLSSSSL 523
I++ G S+ P L + P PLG A G + + SS
Sbjct: 186 PVIFAGGQAYSIQGQYAIPHPDQLTKLHQLAMQQTPFTPLGQTTPAFPGEKLPLHSSEEA 245
Query: 524 YGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKIS 583
MG S SS +S T E+ +P + +G +IG+ G+ + IR++S
Sbjct: 246 QNL----MGQSAGMDASSQAS----------THELTIPNDLIGCIIGRQGTKINEIRQMS 291
Query: 584 GATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQA 619
GA I+++ + +R I+G+P A+ LI A
Sbjct: 292 GAQIKIASAMEGSAERQITITGSPANISLAQYLINA 327
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 95/361 (26%), Positives = 153/361 (42%), Gaps = 71/361 (19%)
Query: 29 DEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYS 88
E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R+VTI
Sbjct: 6 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTI-- 61
Query: 89 HVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIA--------NAVANATDNDKKRKEKE 140
DA+ K A IA N+++N+T K
Sbjct: 62 --------------------TGPTDAIFKAFAMIAYKFEEDIINSMSNSTATSKP---PV 98
Query: 141 ECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGE 200
+++VP+SQ ++IGK G+ IK +R T ++V T + V ISG
Sbjct: 99 TLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNST-------ERAVTISGT 151
Query: 201 SEAVKKALFAISAIMYKFSPR-EDIPLETTVREAPPSIIIPSDVPIYPPGGLY--PNADP 257
+A+ + + I +M + P+ IP AP +I + Y G Y P+ D
Sbjct: 152 PDAIIQCVKQICVVMLESPPKGATIPYRPKPASAP---VIFAGGQAYSIQGQYAIPHPDQ 208
Query: 258 I-----LPSRSVPSILGAARVPDLQGYADTGNTWPVYSTG-----LSLVSGLVGASQ--S 305
+ L + P P A G P++S+ + +G+ +SQ +
Sbjct: 209 LTKLHQLAMQQTPFTPLGQTTP-----AFPGEKLPLHSSEEAQNLMGQSAGMDASSQAST 263
Query: 306 EELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDD 365
EL I P + IG +IG+ G I IRQ SGAQI + + E IT+T SP +
Sbjct: 264 HELTI----PNDLIGCIIGRQGTKINEIRQMSGAQIKIASAMEGSAERQITITG--SPAN 317
Query: 366 I 366
I
Sbjct: 318 I 318
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+TIRLL+ K +G IIGK G + ++R+ + A + IS+G+ P + +V + G
Sbjct: 13 TLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCP------ERIVTITGPTD 66
Query: 448 SVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
++ A I + +D ++ + + PPV
Sbjct: 67 AIFKAFAMIAYKFEEDIINSMSNSTATSKPPV 98
>gi|351697348|gb|EHB00267.1| Poly(rC)-binding protein 3 [Heterocephalus glaber]
Length = 427
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 95/343 (27%), Positives = 163/343 (47%), Gaps = 47/343 (13%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDD-- 365
L IR+L ++G +IGK G T+K +R+ SGA+I++ + N E ++T+T P D
Sbjct: 89 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG---PTDAI 143
Query: 366 IKSMAVEAVLLLQTKINDEDDD------TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
K+ A+ A + IN + VT+RL+V + G +IGK GS I EIR+ T
Sbjct: 144 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 203
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNP-PVGA 478
A V+++ GD ++ + V + G ++ + QI + + + K P P
Sbjct: 204 AQVQVA-GD--MLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPAST 260
Query: 479 DHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGS 538
I++ G ++ +IP PL + S +L + L+ L+M +P+
Sbjct: 261 PVIFAGGQAYTIQGQY-AIPHPDPLAHGLYQPS----AILQLTKLH---QLAMQQTPFPP 312
Query: 539 M----------------SSYSSKLYG---GL---PPPLTLEVLVPANAVGKVIGKAGSNL 576
+ S + L G GL PP T E+ +P + +G +IG+ G+ +
Sbjct: 313 LGQTNPAFPGEKLPLHSSEEAQNLMGQSPGLDASPPASTHELTIPNDLIGCIIGRQGTKI 372
Query: 577 ANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQA 619
IR++SGA I+++++ +R I+GTP A+ LI A
Sbjct: 373 NEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINA 415
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 97/377 (25%), Positives = 160/377 (42%), Gaps = 71/377 (18%)
Query: 18 GKNQKRRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFP 77
GK + +++E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + +
Sbjct: 73 GKKMESKVSEG---GLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG-- 127
Query: 78 GAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIA-----NAVANATDN 132
+R+VTI DA+ K A IA + + + +++
Sbjct: 128 NCPERIVTI----------------------TGPTDAIFKAFAMIAYKFEEDIINSMSNS 165
Query: 133 DKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFD 192
K +++VP+SQ ++IGK G+ IK +R T ++V T +
Sbjct: 166 PATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNST-------E 218
Query: 193 NFVLISGESEAVKKALFAISAIMYKFSPR-EDIPLETTVREAPPSIIIPSDVPIYPPGGL 251
V ISG +A+ + + I +M + P+ IP P +I + Y G
Sbjct: 219 RAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTP---VIFAGGQAYTIQGQ 275
Query: 252 Y--PNADPILPSRSVPS-ILGAARVPDL----QGYADTGNTWPVY-STGLSLVS-----G 298
Y P+ DP+ PS IL ++ L + G T P + L L S
Sbjct: 276 YAIPHPDPLAHGLYQPSAILQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQN 335
Query: 299 LVGAS---------QSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDN 349
L+G S + EL I P + IG +IG+ G I IRQ SGAQI + + +
Sbjct: 336 LMGQSPGLDASPPASTHELTI----PNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEG 391
Query: 350 RDECVITVTAIESPDDI 366
E IT+T +P +I
Sbjct: 392 SSERQITITG--TPANI 406
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+TIRLL+ K +G IIGK G + ++R+ + A + IS+G+ P + +V + G
Sbjct: 88 TLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCP------ERIVTITGPTD 141
Query: 448 SVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
++ A I + +D ++ + + PPV
Sbjct: 142 AIFKAFAMIAYKFEEDIINSMSNSPATSKPPV 173
>gi|291237680|ref|XP_002738761.1| PREDICTED: poly(rC) binding protein 2-like [Saccoglossus
kowalevskii]
Length = 409
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 93/327 (28%), Positives = 152/327 (46%), Gaps = 39/327 (11%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
L IR++ ++G +IGKGG TIK R+ SGA+I++ D+ + E ++TVT
Sbjct: 19 LTIRLIMQGKEVGSIIGKGGETIKKFREQSGARINISDS--SCAERIVTVTG-------S 69
Query: 368 SMAVEAVLLLQTKINDEDDDT-----------VTIRLLVSSKVIGCIIGKSGSIINEIRK 416
+ A+ + TK +ED VT+RL+V + G +IGK GS I EIR+
Sbjct: 70 TEAINNAFEMITKKFEEDVSNNMANSSTPKPPVTLRLVVPASQCGSLIGKGGSKIKEIRE 129
Query: 417 RTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNP-P 475
T A V+++ GD + + V + G ++ + QI + + K P P
Sbjct: 130 NTGASVQVA-GD--MLHQSTERAVTISGTPEAITKCVYQICCVMLESPPKGATIPYRPKP 186
Query: 476 VGADHI---YSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMG 532
A Y+ ++P P + L L + + +L+MG
Sbjct: 187 TNATATHPAYAVHGNYAVP--YPDFMKLHHLTMQHTP-------FLPGQTPFTPTALNMG 237
Query: 533 DSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDS 592
YG ++ S+ T E+++P + +G VIG+ G+ + IR+ISGATI++++S
Sbjct: 238 ---YGVANAASAGTQVATTGQQTYEIMIPNDLIGCVIGRGGAKINEIRQISGATIKIANS 294
Query: 593 KSSRGDRVALISGTPEQKRAAENLIQA 619
+ DR ISGT E A LI +
Sbjct: 295 QEGSNDRSVTISGTVEAINLAHFLINS 321
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 93/369 (25%), Positives = 151/369 (40%), Gaps = 58/369 (15%)
Query: 22 KRRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKD 81
+ I + G ++ R++ +GS+IGK G+ I R+++ AR+ + D +
Sbjct: 4 EEHIKKMANDGPAVTLTIRLIMQGKEVGSIIGKGGETIKKFREQSGARINISDS--SCAE 61
Query: 82 RVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEE 141
R+VT+ + A +A + V+N N K
Sbjct: 62 RIVTVTGSTE------------------AINNAFEMITKKFEEDVSNNMANSSTPKPPVT 103
Query: 142 CQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGES 201
+++VP+SQ ++IGK G+ IK +R T S++V A + H + V ISG
Sbjct: 104 LRLVVPASQCGSLIGKGGSKIKEIRENTGASVQV----AGDMLHQST---ERAVTISGTP 156
Query: 202 EAVKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPS 261
EA+ K ++ I +M E P T+ P + P Y G Y A P P
Sbjct: 157 EAITKCVYQICCVML-----ESPPKGATIPYRPKPTNATATHPAYAVHGNY--AVP-YPD 208
Query: 262 RSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELV-------IRVLC 314
L P L G P T L++ G+ A+ + V ++
Sbjct: 209 FMKLHHLTMQHTPFLPGQT------PFTPTALNMGYGVANAASAGTQVATTGQQTYEIMI 262
Query: 315 PFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAV 374
P + IG VIG+GG I IRQ SGA I + ++++ ++ +T+ S VEA+
Sbjct: 263 PNDLIGCVIGRGGAKINEIRQISGATIKIANSQEGSNDRSVTI----------SGTVEAI 312
Query: 375 LLLQTKIND 383
L IN
Sbjct: 313 NLAHFLINS 321
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 6/93 (6%)
Query: 382 NDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVE 441
ND T+TIRL++ K +G IIGK G I + R+++ A + IS CA + +V
Sbjct: 12 NDGPAVTLTIRLIMQGKEVGSIIGKGGETIKKFREQSGARINISDSS---CA---ERIVT 65
Query: 442 VVGEVGSVRDALVQIILRLRDDALKDRDGSRNP 474
V G ++ +A I + +D + S P
Sbjct: 66 VTGSTEAINNAFEMITKKFEEDVSNNMANSSTP 98
>gi|432931637|ref|XP_004081712.1| PREDICTED: poly(rC)-binding protein 3-like isoform 1 [Oryzias
latipes]
Length = 321
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 151/322 (46%), Gaps = 38/322 (11%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDD-- 365
L IR+L ++G +IGK G T+K +R+ SGA+I++ + N E ++T+T P D
Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG---PTDTI 70
Query: 366 IKSMAVEAVLLLQTKINDEDDDT------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
K+ A+ A + IN + VT+RL+V + G +IGK GS I E+R+ T
Sbjct: 71 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTG 130
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGAD 479
A V+++ P ++ + V + G ++ + QI + + + +PP GA
Sbjct: 131 AQVQVAGDMLP---NSTERAVTISGTPEAIIQCVKQICVVMLE----------SPPKGAT 177
Query: 480 HIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSM 539
Y P+ PV G G + L L+M +P+ +
Sbjct: 178 IPYRPK---------PASTPVIFSGGQAYTIQGQ-YAIPHPDQLTKLHQLAMQQTPFTPL 227
Query: 540 SSYSSKLYG--GLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRG 597
+ G PP T E+ +P + +G +IG+ G+ + IR++SGA I+++++
Sbjct: 228 GQTTPAFPGLDAAPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAMEGSS 287
Query: 598 DRVALISGTPEQKRAAENLIQA 619
+R I+GTP A+ LI A
Sbjct: 288 ERQITITGTPANISLAQYLINA 309
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 148/350 (42%), Gaps = 67/350 (19%)
Query: 28 KDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIY 87
+ E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R+VTI
Sbjct: 7 QSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTI- 63
Query: 88 SHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIA-----NAVANATDNDKKRKEKEEC 142
D + K A IA + + + +++ K
Sbjct: 64 ---------------------TGPTDTIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTL 102
Query: 143 QILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESE 202
+++VP+SQ ++IGK G+ IK +R T ++V T + V ISG E
Sbjct: 103 RLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVAGDMLPNST-------ERAVTISGTPE 155
Query: 203 AVKKALFAISAIMYKFSPR-EDIPLETTVREAPPSI-IIPSDVPIYPPGGLY--PNADPI 258
A+ + + I +M + P+ IP R P S +I S Y G Y P+ D +
Sbjct: 156 AIIQCVKQICVVMLESPPKGATIPY----RPKPASTPVIFSGGQAYTIQGQYAIPHPDQL 211
Query: 259 LPSRSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGA--SQSEELVIRVLCPF 316
L + P + G T P + GL A + + EL I P
Sbjct: 212 TKLHQ----LAMQQTP----FTPLGQTTPAFP-------GLDAAPPASTHELTI----PN 252
Query: 317 NKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
+ IG +IG+ G I IRQ SGAQI + + + E IT+T +P +I
Sbjct: 253 DLIGCIIGRQGTKINEIRQMSGAQIKIANAMEGSSERQITITG--TPANI 300
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 54/103 (52%), Gaps = 11/103 (10%)
Query: 379 TKINDED--DDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADAN 436
TK+ E + T+TIRLL+ K +G IIGK G + ++R+ + A + IS+G+ P
Sbjct: 4 TKVQSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCP------ 57
Query: 437 DELVEVVGEVGSVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
+ +V + G ++ A I + +D ++ + + PPV
Sbjct: 58 ERIVTITGPTDTIFKAFAMIAYKFEEDIINSMSNSPATSKPPV 100
>gi|383158165|gb|AFG61431.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
Length = 139
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/150 (38%), Positives = 95/150 (63%), Gaps = 13/150 (8%)
Query: 93 KEDVEVDDEFNDKEPLCAAQDALLKVHAAIAN-AVANATDNDKKRKEKEECQILVPSSQS 151
KE + +D+ ++ EP+C AQDALL+VH+ IA + DND +K ++ ++LV +SQ
Sbjct: 1 KEKEKDNDDGDENEPICPAQDALLRVHSVIAQESSVKDKDNDADKKGQQNARLLVANSQI 60
Query: 152 ANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAI 211
++IGK G I+++R+++ I++ KD CA FD V+ISG+++AVKKAL+++
Sbjct: 61 GSLIGKGGNNIQKMRTESGAQIQIPRKDE---LPGCAFSFDELVVISGDAKAVKKALYSV 117
Query: 212 SAIMYKFSPREDIPLETTVREAPPSIIIPS 241
SA +YK P+E IP S+I+P+
Sbjct: 118 SAFLYKHPPKEQIPW---------SLILPA 138
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 392 RLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDK-PKCADANDELVEVVGEVGSVR 450
RLLV++ IG +IGK G+ I ++R + A ++I + D+ P CA + DELV + G+ +V+
Sbjct: 52 RLLVANSQIGSLIGKGGNNIQKMRTESGAQIQIPRKDELPGCAFSFDELVVISGDAKAVK 111
Query: 451 DALVQI 456
AL +
Sbjct: 112 KALYSV 117
>gi|426218399|ref|XP_004003434.1| PREDICTED: poly(rC)-binding protein 3 isoform 3 [Ovis aries]
Length = 336
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 159/336 (47%), Gaps = 49/336 (14%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDD-- 365
L IR+L ++G +IGK G T+K +R+ SGA+I++ + N E ++T+T P D
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG---PTDAI 68
Query: 366 IKSMAVEAVLLLQTKINDEDDD------TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
K+ A+ A + IN + VT+RL+V + G +IGK GS I EIR+ T
Sbjct: 69 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 128
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGAD 479
A V+++ P ++ + V + G DA++Q + ++ L+ + S++PP G
Sbjct: 129 AQVQVAGDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLEVQ--SKSPPRGVS 179
Query: 480 HIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSM 539
+ + P+ PV + +A + G + L L+M +P+ +
Sbjct: 180 RVVAPK---------PASTPV--IFAGGQAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPL 228
Query: 540 SSYSSKLYG----------------GLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKIS 583
+ G PP T E+ +P + +G +IG+ G+ + IR++S
Sbjct: 229 GQTNPAFPGTDRAVPFVRSPWACLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMS 288
Query: 584 GATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQA 619
GA I+++++ +R I+GTP A+ LI A
Sbjct: 289 GAQIKIANATEGSSERQITITGTPANISLAQYLINA 324
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 140/345 (40%), Gaps = 56/345 (16%)
Query: 29 DEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYS 88
E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R+VTI
Sbjct: 6 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTIT- 62
Query: 89 HVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIA-----NAVANATDNDKKRKEKEECQ 143
DA+ K A IA + + + +++ K +
Sbjct: 63 ---------------------GPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLR 101
Query: 144 ILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEA 203
++VP+SQ ++IGK G+ IK +R T ++V T + V ISG +A
Sbjct: 102 LVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNST-------ERAVTISGTPDA 154
Query: 204 VKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPI-------YPPGGLYPNAD 256
+ + + I +M + + P R P P+ P+ Y G Y
Sbjct: 155 IIQCVKQICVVMLEVQSKS--PPRGVSRVVAPK---PASTPVIFAGGQAYTIQGQYAIPH 209
Query: 257 PILPSRSVPSILGAARVPDLQ---GYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVL 313
P L ++ P Q + T P + + + AS + EL I
Sbjct: 210 PDLTKLHQLAMQQTPFPPLGQTNPAFPGTDRAVPFVRSPWACLDASPPAS-THELTI--- 265
Query: 314 CPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
P + IG +IG+ G I IRQ SGAQI + + + E IT+T
Sbjct: 266 -PNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITIT 309
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+TIRLL+ K +G IIGK G + ++R+ + A + IS+G+ P + +V + G
Sbjct: 13 TLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCP------ERIVTITGPTD 66
Query: 448 SVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
++ A I + +D ++ + + PPV
Sbjct: 67 AIFKAFAMIAYKFEEDIINSMSNSPATSKPPV 98
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 40/66 (60%), Gaps = 3/66 (4%)
Query: 302 ASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDV-DDTKDNRDECVITVTAI 360
A+ + +R++ P ++ G +IGKGG IK IR+++GAQ+ V D N E +T++
Sbjct: 92 ATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISG- 150
Query: 361 ESPDDI 366
+PD I
Sbjct: 151 -TPDAI 155
>gi|410897345|ref|XP_003962159.1| PREDICTED: poly(rC)-binding protein 3-like [Takifugu rubripes]
Length = 321
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 151/323 (46%), Gaps = 40/323 (12%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDD-- 365
L IR+L ++G +IGK G T+K +R+ SGA+I++ + N E ++T+T P D
Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG---PTDTI 70
Query: 366 IKSMAVEAVLLLQTKINDEDDDT------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
K+ A+ A + IN + VT+RL+V + G +IGK GS I E+R+ T
Sbjct: 71 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTG 130
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNP-PVGA 478
A V+++ GD ++ + V + G ++ + QI + + + K P P
Sbjct: 131 AQVQVA-GDM--LPNSTERAVTISGTPEAIIQCVKQICVVMLESPPKGATIPYRPKPAST 187
Query: 479 DHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGS 538
I+S G ++ Q A + L L+M +P+
Sbjct: 188 PVIFSGGQAYTI--------------QGQYA-------IPHPDQLTKLHQLAMQQTPFTP 226
Query: 539 MSSYSSKLYG--GLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSR 596
+ + G PP T E+ +P + +G +IG+ G+ + IR++SGA I+++++
Sbjct: 227 LGQATPAFPGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAMEGS 286
Query: 597 GDRVALISGTPEQKRAAENLIQA 619
+R I+GTP A+ LI A
Sbjct: 287 SERQITITGTPANISLAQYLINA 309
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 144/347 (41%), Gaps = 61/347 (17%)
Query: 28 KDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIY 87
+ E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R+VTI
Sbjct: 7 QPEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTI- 63
Query: 88 SHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIA-----NAVANATDNDKKRKEKEEC 142
D + K A IA + + + +++ K
Sbjct: 64 ---------------------TGPTDTIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTL 102
Query: 143 QILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESE 202
+++VP+SQ ++IGK G+ IK +R T ++V T + V ISG E
Sbjct: 103 RLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVAGDMLPNST-------ERAVTISGTPE 155
Query: 203 AVKKALFAISAIMYKFSPR-EDIPLETTVREAPPSIIIPSDVPIYPPGGLY--PNADPIL 259
A+ + + I +M + P+ IP P +I S Y G Y P+ D +
Sbjct: 156 AIIQCVKQICVVMLESPPKGATIPYRPKPASTP---VIFSGGQAYTIQGQYAIPHPDQLT 212
Query: 260 PSRSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKI 319
L + P + G P + GL + + EL I P + I
Sbjct: 213 KLHQ----LAMQQTP----FTPLGQATPAFP-GLDASP----PASTHELTI----PNDLI 255
Query: 320 GRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
G +IG+ G I IRQ SGAQI + + + E IT+T +P +I
Sbjct: 256 GCIIGRQGTKINEIRQMSGAQIKIANAMEGSSERQITITG--TPANI 300
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+TIRLL+ K +G IIGK G + ++R+ + A + IS+G+ P + +V + G
Sbjct: 15 TLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCP------ERIVTITGPTD 68
Query: 448 SVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
++ A I + +D ++ + + PPV
Sbjct: 69 TIFKAFAMIAYKFEEDIINSMSNSPATSKPPV 100
>gi|348511523|ref|XP_003443293.1| PREDICTED: poly(rC)-binding protein 3-like [Oreochromis niloticus]
Length = 321
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 151/322 (46%), Gaps = 38/322 (11%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDD-- 365
L IR+L ++G +IGK G T+K +R+ SGA+I++ + N E ++T+T P D
Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG---PTDTI 70
Query: 366 IKSMAVEAVLLLQTKINDEDDDT------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
K+ A+ A + IN + VT+RL+V + G +IGK GS I E+R+ T
Sbjct: 71 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTG 130
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGAD 479
A V+++ P ++ + V + G ++ + QI + + + +PP GA
Sbjct: 131 AQVQVAGDMLP---NSTERAVTISGTPEAIIQCVRQICVVMLE----------SPPKGAT 177
Query: 480 HIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSM 539
Y P+ PV G G + L L+M +P+ +
Sbjct: 178 IPYRPK---------PTSTPVIFSGGQAYTIQGQ-YAIPHPDQLTKLHQLAMQQTPFTPL 227
Query: 540 SSYSSKLYG--GLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRG 597
+ G PP T E+ +P + +G +IG+ G+ + IR++SGA I+++++
Sbjct: 228 GQTTPAFPGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAMEGSS 287
Query: 598 DRVALISGTPEQKRAAENLIQA 619
+R I+GTP A+ LI A
Sbjct: 288 ERQITITGTPANISLAQYLINA 309
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 146/349 (41%), Gaps = 65/349 (18%)
Query: 28 KDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIY 87
+ E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R+VTI
Sbjct: 7 QSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTI- 63
Query: 88 SHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIA-----NAVANATDNDKKRKEKEEC 142
D + K A IA + + + +++ K
Sbjct: 64 ---------------------TGPTDTIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTL 102
Query: 143 QILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESE 202
+++VP+SQ ++IGK G+ IK +R T ++V T + V ISG E
Sbjct: 103 RLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVAGDMLPNST-------ERAVTISGTPE 155
Query: 203 AVKKALFAISAIMYKFSPR-EDIPLETTVREAPPSIIIPSDVPIYPPGGLY--PNADPIL 259
A+ + + I +M + P+ IP P +I S Y G Y P+ D +
Sbjct: 156 AIIQCVRQICVVMLESPPKGATIPYRPKPTSTP---VIFSGGQAYTIQGQYAIPHPDQLT 212
Query: 260 PSRSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGA--SQSEELVIRVLCPFN 317
L + P + G T P + GL + + + EL I P +
Sbjct: 213 KLHQ----LAMQQTP----FTPLGQTTPAFP-------GLDASPPASTHELTI----PND 253
Query: 318 KIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
IG +IG+ G I IRQ SGAQI + + + E IT+T +P +I
Sbjct: 254 LIGCIIGRQGTKINEIRQMSGAQIKIANAMEGSSERQITITG--TPANI 300
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 54/103 (52%), Gaps = 11/103 (10%)
Query: 379 TKINDED--DDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADAN 436
TK+ E + T+TIRLL+ K +G IIGK G + ++R+ + A + IS+G+ P
Sbjct: 4 TKVQSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCP------ 57
Query: 437 DELVEVVGEVGSVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
+ +V + G ++ A I + +D ++ + + PPV
Sbjct: 58 ERIVTITGPTDTIFKAFAMIAYKFEEDIINSMSNSPATSKPPV 100
>gi|297735516|emb|CBI17956.3| unnamed protein product [Vitis vinifera]
Length = 433
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 110/404 (27%), Positives = 171/404 (42%), Gaps = 92/404 (22%)
Query: 269 GAARVPDLQGYADT---GNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGK 325
G P+ QG D G WP + E V R+L P K+G +IG+
Sbjct: 13 GNCHPPEKQGLNDGSGGGEKWPGWPG---------------ENVFRMLIPVQKVGYIIGR 57
Query: 326 GGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKINDED 385
G IK + + + A+I + D E + V+A E PD + A++ +L + I D +
Sbjct: 58 KGEHIKKLSEETKARIKILDGPPGTSERAVMVSAKEEPDAPIAPAIDGLLRVHKCIMDVE 117
Query: 386 DDT-------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDE 438
D V+ RLLV + G +IGK G+ I I++ + VR+ + P A ND
Sbjct: 118 SDVPSAAGVMVSTRLLVVAAQAGSLIGKQGATIKSIQEASNCIVRVLGENLPLFALQNDT 177
Query: 439 LVEVVGEVGSVRDALVQIILRLRDDALKDR---------------DGSRN-PPVGA---D 479
+VE+ GE SV A+ I LR L DR G+ N PP +
Sbjct: 178 VVEIQGEPASVHKAVELIASNLR-KFLVDRSVIKVFEMEMQKPNTQGNENMPPQQSWDPS 236
Query: 480 HIYSSGTGISMPPLLPSI-------------PPVGPLGYDQRA---------DSGSGIGM 517
++ TG P +P++ PP DQ ++G+G+
Sbjct: 237 QVFPINTG-GEPGFVPNLQYMQPPYQLDNYYPPPAQTPLDQHHHHQGPPYGRETGAGV-- 293
Query: 518 LSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLA 577
SS SL S +K+ + PL+ A+AV IG +G N++
Sbjct: 294 -SSPSLT-------------PQQSIVNKITQYMQVPLSY-----ADAV---IGASGVNIS 331
Query: 578 NIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFI 621
+R+ SGATI + ++K G+ I+G+ Q + A+ LIQ F+
Sbjct: 332 YVRRTSGATIAIEETKGVPGEMTVEINGSVSQVQTAQQLIQNFM 375
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 154/346 (44%), Gaps = 51/346 (14%)
Query: 38 IYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVE 97
++R+L P +G +IG+ G+ I + +ET+AR+K++D PG +R V + + K++ D
Sbjct: 41 VFRMLIPVQKVGYIIGRKGEHIKKLSEETKARIKILDGPPGTSERAVMVSA--KEEPDA- 97
Query: 98 VDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGK 157
P+ A D LL+VH I + +D ++LV ++Q+ ++IGK
Sbjct: 98 ---------PIAPAIDGLLRVHKCIMDV---ESDVPSAAGVMVSTRLLVVAAQAGSLIGK 145
Query: 158 AGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYK 217
GATIK ++ + ++V E A++ D V I GE +V KA+ I++ + K
Sbjct: 146 QGATIKSIQEASNCIVRVL----GENLPLFALQNDTVVEIQGEPASVHKAVELIASNLRK 201
Query: 218 F-------------------SPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPI 258
F E++P + + PS + P + P G PN +
Sbjct: 202 FLVDRSVIKVFEMEMQKPNTQGNENMPPQQSWD---PSQVFPINTGGEP--GFVPNLQYM 256
Query: 259 LPSRSVPSIL-GAARVPDLQGYADTGNTWPVY--STGLSLVSGLVGASQS--EELVIRVL 313
P + + A+ P Q + G P Y TG + S + QS ++ +
Sbjct: 257 QPPYQLDNYYPPPAQTPLDQHHHHQG---PPYGRETGAGVSSPSLTPQQSIVNKITQYMQ 313
Query: 314 CPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTA 359
P + VIG G I +R+ SGA I +++TK E + +
Sbjct: 314 VPLSYADAVIGASGVNISYVRRTSGATIAIEETKGVPGEMTVEING 359
>gi|334187557|ref|NP_196518.3| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|332004027|gb|AED91410.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 612
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 149/636 (23%), Positives = 261/636 (41%), Gaps = 110/636 (17%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVD-PFPGAKDRVVTIYSHVKDK 93
E V +RILC G VIGK G ++ + + T + + V P + R++ I+ HV
Sbjct: 28 EYVTFRILCNVSQAGHVIGKHGGMVKKLHKSTESSIWVEKTPLDDSPYRIIKIFGHVGSV 87
Query: 94 EDVEVDDEFND-----------KEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEEC 142
V++ N+ + + AQ AL++V A+ ++ C
Sbjct: 88 SRVKLGVIVNNVSNREKKEQEQEVEVSRAQYALIRVFEALNFGDCTSS--------TVSC 139
Query: 143 QILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGES- 201
+L+ S +IGK G ++R+ +T ++++ D S C D + I G
Sbjct: 140 NLLMEGSHVVTVIGKNGELMQRILEETGCNVQLRSHDLS----ICTNPGDVVLKIEGNRL 195
Query: 202 EAVKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDV------PIYPPGGLYPNA 255
AV KAL +IS+ + P L P ++ P + + P G L+ +
Sbjct: 196 SAVMKALVSISSRLQACPPISTASLH--AEAVPDALRRPMEYRSQQYREVDPHGSLHRHV 253
Query: 256 D---------PILPSRSVPSILGAARVP----DLQGYADTGNTWPVYSTGLSLVSGLVGA 302
+ P + + P I +P D + PV + + A
Sbjct: 254 EISQEDALVRPFFRTITQPRI---DYLPHPSYDHRLITSASKNPPV------TIKQPLQA 304
Query: 303 SQSE--ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAI 360
S+ + ++ +++LC N+ V+ K R + A I V D + DE ++T+TA
Sbjct: 305 SKDDIRQVDLKILCS-NESASVVIK-------TRSVTDASISVGDRHPDCDERLVTITAF 356
Query: 361 ESPDDIKSMAVEAVLLLQTKINDEDD---------DTVTIRLLVSSKVIGCIIGKSGSII 411
E DI S + A++L+ + + + ++T RL+V S I C++G+ G I
Sbjct: 357 EKTKDITSESQRALVLVFSNMYENATAKVLDSGLTSSITARLVVRSNQINCLLGEEGRIK 416
Query: 412 NEIRKRTKADVRISKGDK-PKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDG 470
I++RT A + + ++ PKC N+++V++ GE +VR+A+ Q+ LR+D L ++
Sbjct: 417 TTIQQRTGAFITVLNVEQNPKCVSENNQVVQISGEFPNVREAINQVTSMLRED-LINQSF 475
Query: 471 SRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLS 530
R ++ S P P GY + +G S
Sbjct: 476 QRGSQYAVNY--------SEDPFPELFSPTA--GY---------------TPTFGRSSTM 510
Query: 531 MGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATI--- 587
+ + S SS+L+ PP V + G + L IR + I
Sbjct: 511 DPNDIFHYSSQASSRLWESPPPAAPRS--VNDGSGGLFSTRDDLVLTRIRCVLYVWIWKG 568
Query: 588 --EMSDSKSSRG--DRVALISGTPEQKRAAENLIQA 619
+ S +S RG D ISGTP++ +AAE+ + A
Sbjct: 569 WSQSSTEESERGNMDMTICISGTPDEIQAAEHRLHA 604
>gi|384947752|gb|AFI37481.1| poly(rC)-binding protein 3 isoform 1 [Macaca mulatta]
Length = 370
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 95/339 (28%), Positives = 156/339 (46%), Gaps = 53/339 (15%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDD-- 365
L IR+L ++G +IGK G T+K +R+ SGA+I++ + N E ++T+T P D
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG---PTDAI 100
Query: 366 IKSMAVEAVLLLQTKINDEDDDT------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
K+ A+ A + IN + VT+RL+V + G +IGK GS I EIR+ T
Sbjct: 101 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 160
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNP-PVGA 478
A V+++ GD ++ + V + G ++ + QI + + + K P P
Sbjct: 161 AQVQVA-GDM--LPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPAST 217
Query: 479 DHIYSSGTGISMPPLLPSIP---------------PVGPLGYDQRADSGSGIGMLSSSSL 523
I++ G ++ +IP P PLG A G + + SS
Sbjct: 218 PVIFAGGQAYTIQGQY-AIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEA 276
Query: 524 YGYGSLSMGDSPYGSMSSYSSKLYGGL---PPPLTLEVLVPANAVGKVIGKAGSNLANIR 580
MG S GL PP T E+ +P + +G +IG+ G+ + IR
Sbjct: 277 QNL----MGQS-------------SGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIR 319
Query: 581 KISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQA 619
++SGA I+++++ +R I+GTP A+ LI A
Sbjct: 320 QMSGAQIKIANATEGSSERQITITGTPANISLAQYLINA 358
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 149/351 (42%), Gaps = 53/351 (15%)
Query: 23 RRINEK-DEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKD 81
RR+ K E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +
Sbjct: 31 RRMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPE 88
Query: 82 RVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIA-----NAVANATDNDKKR 136
R+VTI DA+ K A IA + + + +++
Sbjct: 89 RIVTI----------------------TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATS 126
Query: 137 KEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVL 196
K +++VP+SQ ++IGK G+ IK +R T ++V T + V
Sbjct: 127 KPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNST-------ERAVT 179
Query: 197 ISGESEAVKKALFAISAIMYKFSPR-EDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNA 255
ISG +A+ + + I +M + P+ IP P +I + Y G Y
Sbjct: 180 ISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTP---VIFAGGQAYTIQGQYAIP 236
Query: 256 DPILPSRSVPSILGAARVPDLQ-GYADTGNTWPVYSTG-----LSLVSGLVGA--SQSEE 307
P L ++ P Q A G P++S+ + SGL + + + E
Sbjct: 237 HPDLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHE 296
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
L I P + IG +IG+ G I IRQ SGAQI + + + E IT+T
Sbjct: 297 LTI----PNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITIT 343
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+TIRLL+ K +G IIGK G + ++R+ + A + IS+G+ P + +V + G
Sbjct: 45 TLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCP------ERIVTITGPTD 98
Query: 448 SVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
++ A I + +D ++ + + PPV
Sbjct: 99 AIFKAFAMIAYKFEEDIINSMSNSPATSKPPV 130
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 40/66 (60%), Gaps = 3/66 (4%)
Query: 302 ASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDV-DDTKDNRDECVITVTAI 360
A+ + +R++ P ++ G +IGKGG IK IR+++GAQ+ V D N E +T++
Sbjct: 124 ATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISG- 182
Query: 361 ESPDDI 366
+PD I
Sbjct: 183 -TPDAI 187
>gi|380798665|gb|AFE71208.1| poly(rC)-binding protein 3 isoform 1, partial [Macaca mulatta]
Length = 370
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 155/339 (45%), Gaps = 52/339 (15%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDD-- 365
L IR+L ++G +IGK G T+K +R+ SGA+I++ + N E ++T+T P D
Sbjct: 45 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG---PTDAI 99
Query: 366 IKSMAVEAVLLLQTKINDEDDDT------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
K+ A+ A + IN + VT+RL+V + G +IGK GS I EIR+ T
Sbjct: 100 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 159
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNP-PVGA 478
A V+++ GD ++ + V + G ++ + QI + + + K P P
Sbjct: 160 AQVQVA-GDM--LPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPAST 216
Query: 479 DHIYSSGTG--------ISMPPLLPSI-------PPVGPLGYDQRADSGSGIGMLSSSSL 523
I++ G I P L + P PLG A G + + SS
Sbjct: 217 PVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEA 276
Query: 524 YGYGSLSMGDSPYGSMSSYSSKLYGGL---PPPLTLEVLVPANAVGKVIGKAGSNLANIR 580
MG S GL PP T E+ +P + +G +IG+ G+ + IR
Sbjct: 277 QNL----MGQS-------------SGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIR 319
Query: 581 KISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQA 619
++SGA I+++++ +R I+GTP A+ LI A
Sbjct: 320 QMSGAQIKIANATEGSSERQITITGTPANISLAQYLINA 358
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 149/352 (42%), Gaps = 54/352 (15%)
Query: 23 RRINEK-DEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKD 81
RR+ K E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +
Sbjct: 30 RRMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPE 87
Query: 82 RVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIA-----NAVANATDNDKKR 136
R+VTI DA+ K A IA + + + +++
Sbjct: 88 RIVTI----------------------TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATS 125
Query: 137 KEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVL 196
K +++VP+SQ ++IGK G+ IK +R T ++V T + V
Sbjct: 126 KPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNST-------ERAVT 178
Query: 197 ISGESEAVKKALFAISAIMYKFSPR-EDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNA 255
ISG +A+ + + I +M + P+ IP P +I + Y G Y
Sbjct: 179 ISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTP---VIFAGGQAYTIQGQYAIP 235
Query: 256 DPILPSRSVPSILGAARVPDL--QGYADTGNTWPVYSTG-----LSLVSGLVGA--SQSE 306
P ++ + P L A G P++S+ + SGL + + +
Sbjct: 236 HPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTH 295
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
EL I P + IG +IG+ G I IRQ SGAQI + + + E IT+T
Sbjct: 296 ELTI----PNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITIT 343
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+TIRLL+ K +G IIGK G + ++R+ + A + IS+G+ P + +V + G
Sbjct: 44 TLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCP------ERIVTITGPTD 97
Query: 448 SVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
++ A I + +D ++ + + PPV
Sbjct: 98 AIFKAFAMIAYKFEEDIINSMSNSPATSKPPV 129
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 40/66 (60%), Gaps = 3/66 (4%)
Query: 302 ASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDV-DDTKDNRDECVITVTAI 360
A+ + +R++ P ++ G +IGKGG IK IR+++GAQ+ V D N E +T++
Sbjct: 123 ATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISG- 181
Query: 361 ESPDDI 366
+PD I
Sbjct: 182 -TPDAI 186
>gi|363735768|ref|XP_003641607.1| PREDICTED: poly(rC)-binding protein 3-like [Gallus gallus]
gi|449506326|ref|XP_002191682.2| PREDICTED: poly(rC)-binding protein 3 [Taeniopygia guttata]
Length = 339
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 95/339 (28%), Positives = 154/339 (45%), Gaps = 52/339 (15%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDD-- 365
L IR+L ++G +IGK G T+K +R+ SGA+I++ + N E ++T+T P D
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG---PTDAI 68
Query: 366 IKSMAVEAVLLLQTKINDEDDDT------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
K+ A+ A + N + T VT+RL+V + G +IGK GS I EIR+ T
Sbjct: 69 FKAFAMIAYKFEEDITNSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 128
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNP-PVGA 478
A V+++ P ++ + V + G ++ + QI + + + K P P
Sbjct: 129 AQVQVAGDMLP---NSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPAST 185
Query: 479 DHIYSSGTG--------ISMPPLLPSI-------PPVGPLGYDQRADSGSGIGMLSSSSL 523
I++ G I P L + P PLG A G + + SS
Sbjct: 186 PVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFTPLGQTTPAFPGEKLPLHSSEEA 245
Query: 524 YGYGSLSMGDSPYGSMSSYSSKLYGGL---PPPLTLEVLVPANAVGKVIGKAGSNLANIR 580
MG S GL PP T E+ +P + +G +IG+ G+ + IR
Sbjct: 246 QNL----MGQS-------------SGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIR 288
Query: 581 KISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQA 619
++SGA I+++++ +R I+GTP A+ LI A
Sbjct: 289 QMSGAQIKIANATEGSSERQITITGTPANISLAQYLINA 327
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 95/362 (26%), Positives = 154/362 (42%), Gaps = 73/362 (20%)
Query: 29 DEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYS 88
E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R+VTI
Sbjct: 6 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTI-- 61
Query: 89 HVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIA--------NAVANATDNDKKRKEKE 140
DA+ K A IA N+++N+T K
Sbjct: 62 --------------------TGPTDAIFKAFAMIAYKFEEDITNSMSNSTATSKP---PV 98
Query: 141 ECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGE 200
+++VP+SQ ++IGK G+ IK +R T ++V T + V ISG
Sbjct: 99 TLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNST-------ERAVTISGT 151
Query: 201 SEAVKKALFAISAIMYKFSPR-EDIPLETTVREAPPSI-IIPSDVPIYPPGGLY--PNAD 256
+A+ + + I +M + P+ IP R P S +I + Y G Y P+ D
Sbjct: 152 PDAIIQCVKQICVVMLESPPKGATIPY----RPKPASTPVIFAGGQAYTIQGQYAIPHPD 207
Query: 257 PI-----LPSRSVPSILGAARVPDLQGYADTGNTWPVYSTG-----LSLVSGLVGA--SQ 304
+ L + P P A G P++S+ + SGL + +
Sbjct: 208 QLTKLHQLAMQQTPFTPLGQTTP-----AFPGEKLPLHSSEEAQNLMGQSSGLDASPPAS 262
Query: 305 SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPD 364
+ EL I P + IG +IG+ G I IRQ SGAQI + + + E IT+T +P
Sbjct: 263 THELTI----PNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITG--TPA 316
Query: 365 DI 366
+I
Sbjct: 317 NI 318
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+TIRLL+ K +G IIGK G + ++R+ + A + IS+G+ P + +V + G
Sbjct: 13 TLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCP------ERIVTITGPTD 66
Query: 448 SVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
++ A I + +D ++ + + PPV
Sbjct: 67 AIFKAFAMIAYKFEEDITNSMSNSTATSKPPV 98
>gi|403297203|ref|XP_003939468.1| PREDICTED: poly(rC)-binding protein 3 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 371
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 155/339 (45%), Gaps = 52/339 (15%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDD-- 365
L IR+L ++G +IGK G T+K +R+ SGA+I++ + N E ++T+T P D
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG---PTDAI 100
Query: 366 IKSMAVEAVLLLQTKINDEDDDT------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
K+ A+ A + IN + VT+RL+V + G +IGK GS I EIR+ T
Sbjct: 101 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 160
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNP-PVGA 478
A V+++ GD ++ + V + G ++ + QI + + + K P P
Sbjct: 161 AQVQVA-GDM--LPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPAST 217
Query: 479 DHIYSSGTG--------ISMPPLLPSI-------PPVGPLGYDQRADSGSGIGMLSSSSL 523
I++ G I P L + P PLG A G + + SS
Sbjct: 218 PVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEA 277
Query: 524 YGYGSLSMGDSPYGSMSSYSSKLYGGL---PPPLTLEVLVPANAVGKVIGKAGSNLANIR 580
MG S GL PP T E+ +P + +G +IG+ G+ + IR
Sbjct: 278 QNL----MGQS-------------SGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIR 320
Query: 581 KISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQA 619
++SGA I+++++ +R I+GTP A+ LI A
Sbjct: 321 QMSGAQIKIANATEGSSERQITITGTPANISLAQYLINA 359
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 153/360 (42%), Gaps = 56/360 (15%)
Query: 23 RRINEK-DEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKD 81
RR+ K E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +
Sbjct: 31 RRMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPE 88
Query: 82 RVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIA-----NAVANATDNDKKR 136
R+VTI DA+ K A IA + + + +++
Sbjct: 89 RIVTI----------------------TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATS 126
Query: 137 KEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVL 196
K +++VP+SQ ++IGK G+ IK +R T ++V T + V
Sbjct: 127 KPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNST-------ERAVT 179
Query: 197 ISGESEAVKKALFAISAIMYKFSPR-EDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNA 255
ISG +A+ + + I +M + P+ IP P +I + Y G Y
Sbjct: 180 ISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTP---VIFAGGQAYTIQGQYAIP 236
Query: 256 DPILPSRSVPSILGAARVPDL--QGYADTGNTWPVYSTG-----LSLVSGLVGA--SQSE 306
P ++ + P L A G P++S+ + SGL + + +
Sbjct: 237 HPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTH 296
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
EL I P + IG +IG+ G I IRQ SGAQI + + + E IT+T +P +I
Sbjct: 297 ELTI----PNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITG--TPANI 350
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+TIRLL+ K +G IIGK G + ++R+ + A + IS+G+ P + +V + G
Sbjct: 45 TLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCP------ERIVTITGPTD 98
Query: 448 SVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
++ A I + +D ++ + + PPV
Sbjct: 99 AIFKAFAMIAYKFEEDIINSMSNSPATSKPPV 130
>gi|194306631|ref|NP_065389.2| poly(rC)-binding protein 3 isoform 1 [Homo sapiens]
gi|296439262|sp|P57721.2|PCBP3_HUMAN RecName: Full=Poly(rC)-binding protein 3; AltName: Full=Alpha-CP3
gi|119629729|gb|EAX09324.1| poly(rC) binding protein 3, isoform CRA_b [Homo sapiens]
Length = 371
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 155/339 (45%), Gaps = 52/339 (15%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDD-- 365
L IR+L ++G +IGK G T+K +R+ SGA+I++ + N E ++T+T P D
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG---PTDAI 100
Query: 366 IKSMAVEAVLLLQTKINDEDDDT------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
K+ A+ A + IN + VT+RL+V + G +IGK GS I EIR+ T
Sbjct: 101 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 160
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNP-PVGA 478
A V+++ GD ++ + V + G ++ + QI + + + K P P
Sbjct: 161 AQVQVA-GDM--LPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPAST 217
Query: 479 DHIYSSGTG--------ISMPPLLPSI-------PPVGPLGYDQRADSGSGIGMLSSSSL 523
I++ G I P L + P PLG A G + + SS
Sbjct: 218 PVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEA 277
Query: 524 YGYGSLSMGDSPYGSMSSYSSKLYGGL---PPPLTLEVLVPANAVGKVIGKAGSNLANIR 580
MG S GL PP T E+ +P + +G +IG+ G+ + IR
Sbjct: 278 QNL----MGQS-------------SGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIR 320
Query: 581 KISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQA 619
++SGA I+++++ +R I+GTP A+ LI A
Sbjct: 321 QMSGAQIKIANATEGSSERQITITGTPANISLAQYLINA 359
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 153/360 (42%), Gaps = 56/360 (15%)
Query: 23 RRINEK-DEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKD 81
RR+ K E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +
Sbjct: 31 RRMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPE 88
Query: 82 RVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIA-----NAVANATDNDKKR 136
R+VTI DA+ K A IA + + + +++
Sbjct: 89 RIVTI----------------------TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATS 126
Query: 137 KEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVL 196
K +++VP+SQ ++IGK G+ IK +R T ++V T + V
Sbjct: 127 KPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNST-------ERAVT 179
Query: 197 ISGESEAVKKALFAISAIMYKFSPR-EDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNA 255
ISG +A+ + + I +M + P+ IP P +I + Y G Y
Sbjct: 180 ISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTP---VIFAGGQAYTIQGQYAIP 236
Query: 256 DPILPSRSVPSILGAARVPDL--QGYADTGNTWPVYSTG-----LSLVSGLVGA--SQSE 306
P ++ + P L A G P++S+ + SGL + + +
Sbjct: 237 HPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTH 296
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
EL I P + IG +IG+ G I IRQ SGAQI + + + E IT+T +P +I
Sbjct: 297 ELTI----PNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITG--TPANI 350
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+TIRLL+ K +G IIGK G + ++R+ + A + IS+G+ P + +V + G
Sbjct: 45 TLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCP------ERIVTITGPTD 98
Query: 448 SVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
++ A I + +D ++ + + PPV
Sbjct: 99 AIFKAFAMIAYKFEEDIINSMSNSPATSKPPV 130
>gi|332872312|ref|XP_001157899.2| PREDICTED: poly(rC)-binding protein 3 isoform 8 [Pan troglodytes]
gi|397506692|ref|XP_003823855.1| PREDICTED: poly(rC)-binding protein 3 isoform 1 [Pan paniscus]
gi|426393341|ref|XP_004062983.1| PREDICTED: poly(rC)-binding protein 3 [Gorilla gorilla gorilla]
Length = 371
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 155/339 (45%), Gaps = 52/339 (15%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDD-- 365
L IR+L ++G +IGK G T+K +R+ SGA+I++ + N E ++T+T P D
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG---PTDAI 100
Query: 366 IKSMAVEAVLLLQTKINDEDDDT------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
K+ A+ A + IN + VT+RL+V + G +IGK GS I EIR+ T
Sbjct: 101 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 160
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNP-PVGA 478
A V+++ GD ++ + V + G ++ + QI + + + K P P
Sbjct: 161 AQVQVA-GDM--LPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPAST 217
Query: 479 DHIYSSGTG--------ISMPPLLPSI-------PPVGPLGYDQRADSGSGIGMLSSSSL 523
I++ G I P L + P PLG A G + + SS
Sbjct: 218 PVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEA 277
Query: 524 YGYGSLSMGDSPYGSMSSYSSKLYGGL---PPPLTLEVLVPANAVGKVIGKAGSNLANIR 580
MG S GL PP T E+ +P + +G +IG+ G+ + IR
Sbjct: 278 QNL----MGQS-------------SGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIR 320
Query: 581 KISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQA 619
++SGA I+++++ +R I+GTP A+ LI A
Sbjct: 321 QMSGAQIKIANATEGSSERQITITGTPANISLAQYLINA 359
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 149/352 (42%), Gaps = 54/352 (15%)
Query: 23 RRINEK-DEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKD 81
RR+ K E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +
Sbjct: 31 RRMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPE 88
Query: 82 RVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIA-----NAVANATDNDKKR 136
R+VTI DA+ K A IA + + + +++
Sbjct: 89 RIVTI----------------------TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATS 126
Query: 137 KEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVL 196
K +++VP+SQ ++IGK G+ IK +R T ++V T + V
Sbjct: 127 KPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNST-------ERAVT 179
Query: 197 ISGESEAVKKALFAISAIMYKFSPR-EDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNA 255
ISG +A+ + + I +M + P+ IP P +I + Y G Y
Sbjct: 180 ISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTP---VIFAGGQAYTIQGQYAIP 236
Query: 256 DPILPSRSVPSILGAARVPDL--QGYADTGNTWPVYSTG-----LSLVSGLVGA--SQSE 306
P ++ + P L A G P++S+ + SGL + + +
Sbjct: 237 HPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTH 296
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
EL I P + IG +IG+ G I IRQ SGAQI + + + E IT+T
Sbjct: 297 ELTI----PNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITIT 344
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+TIRLL+ K +G IIGK G + ++R+ + A + IS+G+ P + +V + G
Sbjct: 45 TLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCP------ERIVTITGPTD 98
Query: 448 SVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
++ A I + +D ++ + + PPV
Sbjct: 99 AIFKAFAMIAYKFEEDIINSMSNSPATSKPPV 130
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 40/66 (60%), Gaps = 3/66 (4%)
Query: 302 ASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDV-DDTKDNRDECVITVTAI 360
A+ + +R++ P ++ G +IGKGG IK IR+++GAQ+ V D N E +T++
Sbjct: 124 ATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISG- 182
Query: 361 ESPDDI 366
+PD I
Sbjct: 183 -TPDAI 187
>gi|109065035|ref|XP_001099540.1| PREDICTED: poly(rC)-binding protein 3-like isoform 4 [Macaca
mulatta]
Length = 370
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 95/339 (28%), Positives = 156/339 (46%), Gaps = 53/339 (15%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDD-- 365
L IR+L ++G +IGK G T+K +R+ SGA+I++ + N E ++T+T P D
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG---PTDAI 100
Query: 366 IKSMAVEAVLLLQTKINDEDDDT------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
K+ A+ A + IN + VT+RL+V + G +IGK GS I EIR+ T
Sbjct: 101 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 160
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNP-PVGA 478
A V+++ GD ++ + V + G ++ + QI + + + K P P
Sbjct: 161 AQVQVA-GDM--LPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPAST 217
Query: 479 DHIYSSGTGISMPPLLPSIP---------------PVGPLGYDQRADSGSGIGMLSSSSL 523
I++ G ++ +IP P PLG A G + + SS
Sbjct: 218 PVIFAGGQAYTIQGQY-AIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEA 276
Query: 524 YGYGSLSMGDSPYGSMSSYSSKLYGGL---PPPLTLEVLVPANAVGKVIGKAGSNLANIR 580
MG S GL PP T E+ +P + +G +IG+ G+ + IR
Sbjct: 277 QNL----MGQS-------------SGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIR 319
Query: 581 KISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQA 619
++SGA I+++++ +R I+GTP A+ LI A
Sbjct: 320 QMSGAQIKIANATEGSSERQITITGTPANISLAQYLINA 358
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 149/351 (42%), Gaps = 53/351 (15%)
Query: 23 RRINEK-DEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKD 81
RR+ K E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +
Sbjct: 31 RRMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPE 88
Query: 82 RVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIA-----NAVANATDNDKKR 136
R+VTI DA+ K A IA + + + +++
Sbjct: 89 RIVTI----------------------TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATS 126
Query: 137 KEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVL 196
K +++VP+SQ ++IGK G+ IK +R T ++V T + V
Sbjct: 127 KPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNST-------ERAVT 179
Query: 197 ISGESEAVKKALFAISAIMYKFSPR-EDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNA 255
ISG +A+ + + I +M + P+ IP P +I + Y G Y
Sbjct: 180 ISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTP---VIFAGGQAYTIQGQYAIP 236
Query: 256 DPILPSRSVPSILGAARVPDLQ-GYADTGNTWPVYSTG-----LSLVSGLVGA--SQSEE 307
P L ++ P Q A G P++S+ + SGL + + + E
Sbjct: 237 HPDLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHE 296
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
L I P + IG +IG+ G I IRQ SGAQI + + + E IT+T
Sbjct: 297 LTI----PNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITIT 343
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+TIRLL+ K +G IIGK G + ++R+ + A + IS+G+ P + +V + G
Sbjct: 45 TLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCP------ERIVTITGPTD 98
Query: 448 SVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
++ A I + +D ++ + + PPV
Sbjct: 99 AIFKAFAMIAYKFEEDIINSMSNSPATSKPPV 130
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 40/66 (60%), Gaps = 3/66 (4%)
Query: 302 ASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDV-DDTKDNRDECVITVTAI 360
A+ + +R++ P ++ G +IGKGG IK IR+++GAQ+ V D N E +T++
Sbjct: 124 ATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISG- 182
Query: 361 ESPDDI 366
+PD I
Sbjct: 183 -TPDAI 187
>gi|348554794|ref|XP_003463210.1| PREDICTED: poly(rC)-binding protein 3-like [Cavia porcellus]
Length = 384
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 95/339 (28%), Positives = 154/339 (45%), Gaps = 52/339 (15%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDD-- 365
L IR+L ++G +IGK G T+K +R+ SGA+I++ + N E ++T+T P D
Sbjct: 59 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG---PTDAI 113
Query: 366 IKSMAVEAVLLLQTKINDEDDDT------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
K+ A+ A + IN + VT+RL+V + G +IGK GS I EIR+ T
Sbjct: 114 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 173
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNP-PVGA 478
A V+++ P ++ + V + G ++ + QI + + + K P P
Sbjct: 174 AQVQVAGDMLP---NSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPAST 230
Query: 479 DHIYSSGTG--------ISMPPLLPSI-------PPVGPLGYDQRADSGSGIGMLSSSSL 523
I++ G I P L + P PLG A G + + SS
Sbjct: 231 PVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEA 290
Query: 524 YGYGSLSMGDSPYGSMSSYSSKLYGGL---PPPLTLEVLVPANAVGKVIGKAGSNLANIR 580
MG S GL PP T E+ +P + +G +IG+ G+ + IR
Sbjct: 291 QNL----MGQS-------------SGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIR 333
Query: 581 KISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQA 619
++SGA I+++++ +R I+GTP A+ LI A
Sbjct: 334 QMSGAQIKIANATEGSSERQITITGTPANISLAQYLINA 372
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 153/360 (42%), Gaps = 56/360 (15%)
Query: 23 RRINEK-DEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKD 81
R++ K E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +
Sbjct: 44 RKMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPE 101
Query: 82 RVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIA-----NAVANATDNDKKR 136
R+VTI DA+ K A IA + + + +++
Sbjct: 102 RIVTI----------------------TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATS 139
Query: 137 KEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVL 196
K +++VP+SQ ++IGK G+ IK +R T ++V T + V
Sbjct: 140 KPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNST-------ERAVT 192
Query: 197 ISGESEAVKKALFAISAIMYKFSPR-EDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNA 255
ISG +A+ + + I +M + P+ IP P +I + Y G Y
Sbjct: 193 ISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTP---VIFAGGQAYTIQGQYAIP 249
Query: 256 DPILPSRSVPSILGAARVPDL--QGYADTGNTWPVYSTG-----LSLVSGLVGA--SQSE 306
P ++ + P L A G P++S+ + SGL + + +
Sbjct: 250 HPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTH 309
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
EL I P + IG +IG+ G I IRQ SGAQI + + + E IT+T +P +I
Sbjct: 310 ELTI----PNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITG--TPANI 363
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+TIRLL+ K +G IIGK G + ++R+ + A + IS+G+ P + +V + G
Sbjct: 58 TLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCP------ERIVTITGPTD 111
Query: 448 SVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
++ A I + +D ++ + + PPV
Sbjct: 112 AIFKAFAMIAYKFEEDIINSMSNSPATSKPPV 143
>gi|326922311|ref|XP_003207393.1| PREDICTED: poly(rC)-binding protein 3-like [Meleagris gallopavo]
Length = 313
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 151/324 (46%), Gaps = 48/324 (14%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDD-- 365
L IR+L ++G +IGK G T+K +R+ SGA+I++ + N E ++T+T P D
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG---PTDAI 68
Query: 366 IKSMAVEAVLLLQTKINDEDDDT------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
K+ A+ A + N + T VT+RL+V + G +IGK GS I EIR+ T
Sbjct: 69 FKAFAMIAYKFEEDITNSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 128
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQI-ILRLRDDALKDRDGSRNPPVGA 478
A V+++ P ++ + V + G ++ + QI ++ L ++ + +P +
Sbjct: 129 AQVQVAGDMLP---NSTERAVTISGTPDAIIQCVKQICVVMLEAYTIQGQYAIPHPDLTK 185
Query: 479 DHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGS 538
H L P PLG A G + + SS MG S
Sbjct: 186 LH-----------QLAMQQTPFTPLGQTTPAFPGEKLPLHSSEEAQNL----MGQS---- 226
Query: 539 MSSYSSKLYGGL---PPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSS 595
GL PP T E+ +P + +G +IG+ G+ + IR++SGA I+++++
Sbjct: 227 ---------SGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEG 277
Query: 596 RGDRVALISGTPEQKRAAENLIQA 619
+R I+GTP A+ LI A
Sbjct: 278 SSERQITITGTPANISLAQYLINA 301
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 87/349 (24%), Positives = 142/349 (40%), Gaps = 73/349 (20%)
Query: 29 DEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYS 88
E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R+VTI
Sbjct: 6 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTI-- 61
Query: 89 HVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIA--------NAVANATDNDKKRKEKE 140
DA+ K A IA N+++N+T K
Sbjct: 62 --------------------TGPTDAIFKAFAMIAYKFEEDITNSMSNSTATSKP---PV 98
Query: 141 ECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGE 200
+++VP+SQ ++IGK G+ IK +R T ++V T + V ISG
Sbjct: 99 TLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNST-------ERAVTISGT 151
Query: 201 SEAVKKALFAISAIM---YKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADP 257
+A+ + + I +M Y + IP + ++ P P G P
Sbjct: 152 PDAIIQCVKQICVVMLEAYTIQGQYAIPHPDLTKLHQLAM---QQTPFTPLG----QTTP 204
Query: 258 ILPSRSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFN 317
P +P + + +L G + + P ST EL I P +
Sbjct: 205 AFPGEKLP-LHSSEEAQNLMGQSSGLDASPPAST--------------HELTI----PND 245
Query: 318 KIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
IG +IG+ G I IRQ SGAQI + + + E IT+T +P +I
Sbjct: 246 LIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITG--TPANI 292
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+TIRLL+ K +G IIGK G + ++R+ + A + IS+G+ P + +V + G
Sbjct: 13 TLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCP------ERIVTITGPTD 66
Query: 448 SVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
++ A I + +D ++ + + PPV
Sbjct: 67 AIFKAFAMIAYKFEEDITNSMSNSTATSKPPV 98
>gi|171906586|ref|NP_067543.2| poly(rC)-binding protein 3 [Mus musculus]
gi|296439279|sp|P57722.3|PCBP3_MOUSE RecName: Full=Poly(rC)-binding protein 3; AltName: Full=Alpha-CP3
gi|26348076|dbj|BAC37686.1| unnamed protein product [Mus musculus]
gi|148699881|gb|EDL31828.1| poly(rC) binding protein 3, isoform CRA_a [Mus musculus]
gi|148699882|gb|EDL31829.1| poly(rC) binding protein 3, isoform CRA_a [Mus musculus]
gi|148699883|gb|EDL31830.1| poly(rC) binding protein 3, isoform CRA_a [Mus musculus]
gi|148699888|gb|EDL31835.1| poly(rC) binding protein 3, isoform CRA_a [Mus musculus]
Length = 371
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 155/339 (45%), Gaps = 52/339 (15%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDD-- 365
L IR+L ++G +IGK G T+K +R+ SGA+I++ + N E ++T+T P D
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG---PTDAI 100
Query: 366 IKSMAVEAVLLLQTKINDEDDDT------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
K+ A+ A + IN + VT+RL+V + G +IGK GS I EIR+ T
Sbjct: 101 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 160
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNP-PVGA 478
A V+++ GD ++ + V + G ++ + QI + + + K P P
Sbjct: 161 AQVQVA-GDM--LPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPAST 217
Query: 479 DHIYSSGTG--------ISMPPLLPSI-------PPVGPLGYDQRADSGSGIGMLSSSSL 523
I++ G I P L + P PLG A G + + SS
Sbjct: 218 PVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEA 277
Query: 524 YGYGSLSMGDSPYGSMSSYSSKLYGGL---PPPLTLEVLVPANAVGKVIGKAGSNLANIR 580
MG S GL PP T E+ +P + +G +IG+ G+ + IR
Sbjct: 278 QNL----MGQS-------------SGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIR 320
Query: 581 KISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQA 619
++SGA I+++++ +R I+GTP A+ LI A
Sbjct: 321 QMSGAQIKIANATEGSSERQITITGTPANISLAQYLINA 359
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 149/353 (42%), Gaps = 55/353 (15%)
Query: 29 DEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYS 88
E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R+VTI
Sbjct: 38 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTI-- 93
Query: 89 HVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIA-----NAVANATDNDKKRKEKEECQ 143
DA+ K A IA + + + +++ K +
Sbjct: 94 --------------------TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLR 133
Query: 144 ILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEA 203
++VP+SQ ++IGK G+ IK +R T ++V T + V ISG +A
Sbjct: 134 LVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNST-------ERAVTISGTPDA 186
Query: 204 VKKALFAISAIMYKFSPR-EDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSR 262
+ + + I +M + P+ IP P +I + Y G Y P ++
Sbjct: 187 IIQCVKQICVVMLESPPKGATIPYRPKPASTP---VIFAGGQAYTIQGQYAIPHPDQLTK 243
Query: 263 SVPSILGAARVPDL--QGYADTGNTWPVYSTG-----LSLVSGLVGA--SQSEELVIRVL 313
+ P L A G P++S+ + SGL + + + EL I
Sbjct: 244 LHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTI--- 300
Query: 314 CPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
P + IG +IG+ G I IRQ SGAQI + + + E IT+T +P +I
Sbjct: 301 -PNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITG--TPANI 350
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+TIRLL+ K +G IIGK G + ++R+ + A + IS+G+ P + +V + G
Sbjct: 45 TLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCP------ERIVTITGPTD 98
Query: 448 SVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
++ A I + +D ++ + + PPV
Sbjct: 99 AIFKAFAMIAYKFEEDIINSMSNSPATSKPPV 130
>gi|119629730|gb|EAX09325.1| poly(rC) binding protein 3, isoform CRA_c [Homo sapiens]
Length = 370
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 95/339 (28%), Positives = 156/339 (46%), Gaps = 53/339 (15%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDD-- 365
L IR+L ++G +IGK G T+K +R+ SGA+I++ + N E ++T+T P D
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG---PTDAI 100
Query: 366 IKSMAVEAVLLLQTKINDEDDDT------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
K+ A+ A + IN + VT+RL+V + G +IGK GS I EIR+ T
Sbjct: 101 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 160
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNP-PVGA 478
A V+++ GD ++ + V + G ++ + QI + + + K P P
Sbjct: 161 AQVQVA-GDM--LPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPAST 217
Query: 479 DHIYSSGTGISMPPLLPSIP---------------PVGPLGYDQRADSGSGIGMLSSSSL 523
I++ G ++ +IP P PLG A G + + SS
Sbjct: 218 PVIFAGGQAYTIQGQY-AIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEA 276
Query: 524 YGYGSLSMGDSPYGSMSSYSSKLYGGL---PPPLTLEVLVPANAVGKVIGKAGSNLANIR 580
MG S GL PP T E+ +P + +G +IG+ G+ + IR
Sbjct: 277 QNL----MGQS-------------SGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIR 319
Query: 581 KISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQA 619
++SGA I+++++ +R I+GTP A+ LI A
Sbjct: 320 QMSGAQIKIANATEGSSERQITITGTPANISLAQYLINA 358
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 92/359 (25%), Positives = 153/359 (42%), Gaps = 55/359 (15%)
Query: 23 RRINEK-DEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKD 81
RR+ K E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +
Sbjct: 31 RRMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPE 88
Query: 82 RVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIA-----NAVANATDNDKKR 136
R+VTI DA+ K A IA + + + +++
Sbjct: 89 RIVTI----------------------TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATS 126
Query: 137 KEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVL 196
K +++VP+SQ ++IGK G+ IK +R T ++V T + V
Sbjct: 127 KPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNST-------ERAVT 179
Query: 197 ISGESEAVKKALFAISAIMYKFSPR-EDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNA 255
ISG +A+ + + I +M + P+ IP P +I + Y G Y
Sbjct: 180 ISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTP---VIFAGGQAYTIQGQYAIP 236
Query: 256 DPILPSRSVPSILGAARVPDLQ-GYADTGNTWPVYSTG-----LSLVSGLVGA--SQSEE 307
P L ++ P Q A G P++S+ + SGL + + + E
Sbjct: 237 HPDLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHE 296
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
L I P + IG +IG+ G I IRQ SGAQI + + + E IT+T +P +I
Sbjct: 297 LTI----PNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITG--TPANI 349
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+TIRLL+ K +G IIGK G + ++R+ + A + IS+G+ P + +V + G
Sbjct: 45 TLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCP------ERIVTITGPTD 98
Query: 448 SVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
++ A I + +D ++ + + PPV
Sbjct: 99 AIFKAFAMIAYKFEEDIINSMSNSPATSKPPV 130
>gi|9957161|gb|AAG09238.1|AF176327_1 alphaCP-3 [Mus musculus]
Length = 339
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 95/339 (28%), Positives = 154/339 (45%), Gaps = 52/339 (15%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDD-- 365
L IR+L ++G +IGK G T+K +R+ SGA+I++ + N E ++T+T P D
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG---PTDAI 68
Query: 366 IKSMAVEAVLLLQTKINDEDDDT------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
K+ A+ A + IN + VT+RL+V + G +IGK GS I EIR+ T
Sbjct: 69 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 128
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNP-PVGA 478
A V+++ P ++ + V + G ++ + QI + + + K P P
Sbjct: 129 AQVQVAGDMLP---NSTERAVTISGTPDAIFQCVKQICVVMLESPPKGATIPYRPKPACT 185
Query: 479 DHIYSSGTG--------ISMPPLLPSI-------PPVGPLGYDQRADSGSGIGMLSSSSL 523
I++ G I P L + P PLG A G + + SS
Sbjct: 186 PVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEA 245
Query: 524 YGYGSLSMGDSPYGSMSSYSSKLYGGL---PPPLTLEVLVPANAVGKVIGKAGSNLANIR 580
MG S GL PP T E+ +P + +G +IG+ G+ + IR
Sbjct: 246 QNL----MGQS-------------SGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIR 288
Query: 581 KISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQA 619
++SGA I+++++ +R I+GTP A+ LI A
Sbjct: 289 QMSGAQIKIANATEGSSERQITITGTPANISLAQYLINA 327
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 149/353 (42%), Gaps = 55/353 (15%)
Query: 29 DEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYS 88
E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R+VTI
Sbjct: 6 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTI-- 61
Query: 89 HVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIA-----NAVANATDNDKKRKEKEECQ 143
DA+ K A IA + + + +++ K +
Sbjct: 62 --------------------TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLR 101
Query: 144 ILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEA 203
++VP+SQ ++IGK G+ IK +R T ++V T + V ISG +A
Sbjct: 102 LVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNST-------ERAVTISGTPDA 154
Query: 204 VKKALFAISAIMYKFSPR-EDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSR 262
+ + + I +M + P+ IP P +I + Y G Y P ++
Sbjct: 155 IFQCVKQICVVMLESPPKGATIPYRPKPACTP---VIFAGGQAYTIQGQYAIPHPDQLTK 211
Query: 263 SVPSILGAARVPDL--QGYADTGNTWPVYSTG-----LSLVSGLVGA--SQSEELVIRVL 313
+ P L A G P++S+ + SGL + + + EL I
Sbjct: 212 LHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTI--- 268
Query: 314 CPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
P + IG +IG+ G I IRQ SGAQI + + + E IT+T +P +I
Sbjct: 269 -PNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITG--TPANI 318
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+TIRLL+ K +G IIGK G + ++R+ + A + IS+G+ P + +V + G
Sbjct: 13 TLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCP------ERIVTITGPTD 66
Query: 448 SVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
++ A I + +D ++ + + PPV
Sbjct: 67 AIFKAFAMIAYKFEEDIINSMSNSPATSKPPV 98
>gi|108862919|gb|ABA99242.2| FLK, putative, expressed [Oryza sativa Japonica Group]
gi|222617409|gb|EEE53541.1| hypothetical protein OsJ_36750 [Oryza sativa Japonica Group]
Length = 517
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 107/203 (52%), Gaps = 19/203 (9%)
Query: 18 GKNQKRRI-NEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPF 76
G+ Q + +EK G ++RIL P +G+VIG+ G+ I + +E+RAR+KV+D
Sbjct: 95 GEQQANAVTDEKKWPGWPGESVFRILVPAQKVGAVIGRKGEFIKKMCEESRARIKVLDGP 154
Query: 77 PGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKR 136
PG DR V I + KD+ D PL A D LL+VH I + + +D ++
Sbjct: 155 PGVPDRAVMISA--KDEPDA----------PLPPAVDGLLRVHKRITDGLDGESDQPQRA 202
Query: 137 KEK-EECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFV 195
++LVP+SQ+ ++IGK GATIK ++ ++ +++ E A+ D V
Sbjct: 203 AGTVGPTRLLVPASQAGSLIGKQGATIKSIQDASKCVLRIL-----ESVPPVALSDDRVV 257
Query: 196 LISGESEAVKKALFAISAIMYKF 218
I GE V KA+ I++ + KF
Sbjct: 258 EIQGEPLDVHKAVELIASHLRKF 280
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
E V R+L P K+G VIG+ G IK + + S A+I V D + + ++A + PD
Sbjct: 114 ESVFRILVPAQKVGAVIGRKGEFIKKMCEESRARIKVLDGPPGVPDRAVMISAKDEPDAP 173
Query: 367 KSMAVEAVLLLQTKIND----EDDD------TV-TIRLLVSSKVIGCIIGKSGSIINEIR 415
AV+ +L + +I D E D TV RLLV + G +IGK G+ I I+
Sbjct: 174 LPPAVDGLLRVHKRITDGLDGESDQPQRAAGTVGPTRLLVPASQAGSLIGKQGATIKSIQ 233
Query: 416 KRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLR 461
+K +RI + P A ++D +VE+ GE V A+ I LR
Sbjct: 234 DASKCVLRILE-SVPPVALSDDRVVEIQGEPLDVHKAVELIASHLR 278
>gi|361066701|gb|AEW07662.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158160|gb|AFG61426.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158161|gb|AFG61427.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158162|gb|AFG61428.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158163|gb|AFG61429.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158164|gb|AFG61430.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158166|gb|AFG61432.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158167|gb|AFG61433.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158168|gb|AFG61434.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158169|gb|AFG61435.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158170|gb|AFG61436.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158171|gb|AFG61437.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158172|gb|AFG61438.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158173|gb|AFG61439.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158174|gb|AFG61440.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158175|gb|AFG61441.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158176|gb|AFG61442.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158177|gb|AFG61443.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
Length = 139
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 95/150 (63%), Gaps = 13/150 (8%)
Query: 93 KEDVEVDDEFNDKEPLCAAQDALLKVHAAIAN-AVANATDNDKKRKEKEECQILVPSSQS 151
KE + +++ ++ EP+C AQDALL+VH+ IA + DND +K ++ ++LV +SQ
Sbjct: 1 KEKEKDNEDGDENEPICPAQDALLRVHSVIAQESSVKDKDNDADKKGQQNARLLVANSQI 60
Query: 152 ANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAI 211
++IGK G I+++R+++ I++ KD CA FD V+ISG+++AVKKAL+++
Sbjct: 61 GSLIGKGGNNIQKMRTESGAQIQIPRKDE---LPGCAFSFDELVVISGDAKAVKKALYSV 117
Query: 212 SAIMYKFSPREDIPLETTVREAPPSIIIPS 241
SA +YK P+E IP S+I+P+
Sbjct: 118 SAFLYKHPPKEQIPW---------SLILPA 138
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 392 RLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDK-PKCADANDELVEVVGEVGSVR 450
RLLV++ IG +IGK G+ I ++R + A ++I + D+ P CA + DELV + G+ +V+
Sbjct: 52 RLLVANSQIGSLIGKGGNNIQKMRTESGAQIQIPRKDELPGCAFSFDELVVISGDAKAVK 111
Query: 451 DALVQI 456
AL +
Sbjct: 112 KALYSV 117
>gi|354476790|ref|XP_003500606.1| PREDICTED: poly(rC)-binding protein 3 [Cricetulus griseus]
gi|149043674|gb|EDL97125.1| rCG61051, isoform CRA_a [Rattus norvegicus]
gi|149043675|gb|EDL97126.1| rCG61051, isoform CRA_a [Rattus norvegicus]
gi|149043676|gb|EDL97127.1| rCG61051, isoform CRA_a [Rattus norvegicus]
gi|149043677|gb|EDL97128.1| rCG61051, isoform CRA_a [Rattus norvegicus]
gi|344241934|gb|EGV98037.1| Poly(rC)-binding protein 3 [Cricetulus griseus]
Length = 371
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 155/339 (45%), Gaps = 52/339 (15%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDD-- 365
L IR+L ++G +IGK G T+K +R+ SGA+I++ + N E ++T+T P D
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG---PTDAI 100
Query: 366 IKSMAVEAVLLLQTKINDEDDDT------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
K+ A+ A + IN + VT+RL+V + G +IGK GS I EIR+ T
Sbjct: 101 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 160
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNP-PVGA 478
A V+++ GD ++ + V + G ++ + QI + + + K P P
Sbjct: 161 AQVQVA-GDM--LPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPAST 217
Query: 479 DHIYSSGTG--------ISMPPLLPSI-------PPVGPLGYDQRADSGSGIGMLSSSSL 523
I++ G I P L + P PLG A G + + SS
Sbjct: 218 PVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEA 277
Query: 524 YGYGSLSMGDSPYGSMSSYSSKLYGGL---PPPLTLEVLVPANAVGKVIGKAGSNLANIR 580
MG S GL PP T E+ +P + +G +IG+ G+ + IR
Sbjct: 278 QNL----MGQS-------------SGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIR 320
Query: 581 KISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQA 619
++SGA I+++++ +R I+GTP A+ LI A
Sbjct: 321 QMSGAQIKIANATEGSSERQITITGTPANISLAQYLINA 359
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 149/353 (42%), Gaps = 55/353 (15%)
Query: 29 DEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYS 88
E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R+VTI
Sbjct: 38 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTI-- 93
Query: 89 HVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIA-----NAVANATDNDKKRKEKEECQ 143
DA+ K A IA + + + +++ K +
Sbjct: 94 --------------------TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLR 133
Query: 144 ILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEA 203
++VP+SQ ++IGK G+ IK +R T ++V T + V ISG +A
Sbjct: 134 LVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNST-------ERAVTISGTPDA 186
Query: 204 VKKALFAISAIMYKFSPR-EDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSR 262
+ + + I +M + P+ IP P +I + Y G Y P ++
Sbjct: 187 IIQCVKQICVVMLESPPKGATIPYRPKPASTP---VIFAGGQAYTIQGQYAIPHPDQLTK 243
Query: 263 SVPSILGAARVPDL--QGYADTGNTWPVYSTG-----LSLVSGLVGA--SQSEELVIRVL 313
+ P L A G P++S+ + SGL + + + EL I
Sbjct: 244 LHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTI--- 300
Query: 314 CPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
P + IG +IG+ G I IRQ SGAQI + + + E IT+T +P +I
Sbjct: 301 -PNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITG--TPANI 350
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+TIRLL+ K +G IIGK G + ++R+ + A + IS+G+ P + +V + G
Sbjct: 45 TLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCP------ERIVTITGPTD 98
Query: 448 SVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
++ A I + +D ++ + + PPV
Sbjct: 99 AIFKAFAMIAYKFEEDIINSMSNSPATSKPPV 130
>gi|26330216|dbj|BAC28838.1| unnamed protein product [Mus musculus]
Length = 370
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 95/339 (28%), Positives = 156/339 (46%), Gaps = 53/339 (15%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDD-- 365
L IR+L ++G +IGK G T+K +R+ SGA+I++ + N E ++T+T P D
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG---PTDAI 100
Query: 366 IKSMAVEAVLLLQTKINDEDDDT------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
K+ A+ A + IN + VT+RL+V + G +IGK GS I EIR+ T
Sbjct: 101 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 160
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNP-PVGA 478
A V+++ GD ++ + V + G ++ + QI + + + K P P
Sbjct: 161 AQVQVA-GDM--LPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPAST 217
Query: 479 DHIYSSGTGISMPPLLPSIP---------------PVGPLGYDQRADSGSGIGMLSSSSL 523
I++ G ++ +IP P PLG A G + + SS
Sbjct: 218 PVIFAGGQAYTIQGQY-AIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEA 276
Query: 524 YGYGSLSMGDSPYGSMSSYSSKLYGGL---PPPLTLEVLVPANAVGKVIGKAGSNLANIR 580
MG S GL PP T E+ +P + +G +IG+ G+ + IR
Sbjct: 277 QNL----MGQS-------------SGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIR 319
Query: 581 KISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQA 619
++SGA I+++++ +R I+GTP A+ LI A
Sbjct: 320 QMSGAQIKIANATEGSSERQITITGTPANISLAQYLINA 358
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 149/352 (42%), Gaps = 54/352 (15%)
Query: 29 DEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYS 88
E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R+VTI
Sbjct: 38 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTI-- 93
Query: 89 HVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIA-----NAVANATDNDKKRKEKEECQ 143
DA+ K A IA + + + +++ K +
Sbjct: 94 --------------------TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLR 133
Query: 144 ILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEA 203
++VP+SQ ++IGK G+ IK +R T ++V T + V ISG +A
Sbjct: 134 LVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNST-------ERAVTISGTPDA 186
Query: 204 VKKALFAISAIMYKFSPR-EDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSR 262
+ + + I +M + P+ IP P +I + Y G Y P L
Sbjct: 187 IIQCVKQICVVMLESPPKGATIPYRPKPASTP---VIFAGGQAYTIQGQYAIPHPDLTKL 243
Query: 263 SVPSILGAARVPDLQ-GYADTGNTWPVYSTG-----LSLVSGLVGA--SQSEELVIRVLC 314
++ P Q A G P++S+ + SGL + + + EL I
Sbjct: 244 HQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTI---- 299
Query: 315 PFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
P + IG +IG+ G I IRQ SGAQI + + + E IT+T +P +I
Sbjct: 300 PNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITG--TPANI 349
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+TIRLL+ K +G IIGK G + ++R+ + A + IS+G+ P + +V + G
Sbjct: 45 TLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCP------ERIVTITGPTD 98
Query: 448 SVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
++ A I + +D ++ + + PPV
Sbjct: 99 AIFKAFAMIAYKFEEDIINSMSNSPATSKPPV 130
>gi|410897014|ref|XP_003961994.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Takifugu rubripes]
Length = 607
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 161/336 (47%), Gaps = 38/336 (11%)
Query: 297 SGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVIT 356
SG GA ++ + +R++ P +G +IGK G TIK++ + + +++D+ K+N
Sbjct: 186 SGEFGAPRTTQQDLRIIVPTQYVGAIIGKEGLTIKNVTKQTQSKVDIHR-KENAGAAEKP 244
Query: 357 VTAIESPDDIKSMAVEAVLLLQTKINDEDD-DTVTIRLLVSSKVIGCIIGKSGSIINEIR 415
+T +P+ + + ++Q + N+ + + ++++ S+ IG +IGK G + +I
Sbjct: 245 ITIHSTPEGCSAACRMIMEIMQKEANETKAMEDIPLKIIASNNYIGRLIGKQGRNLKKIE 304
Query: 416 KRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLR-----DDALKDRDG 470
+ T + IS + N+ + V G + + +A V+I+ +LR D A ++
Sbjct: 305 EETGTKITISSLQDLNIYN-NERTITVKGSLEACCNAEVEIMKKLREAYENDIAAINQQT 363
Query: 471 SRNP--PVGADHIYSSGTGISMPPLLP--SIPPVGPLGYDQRADSGSGIGMLSSSSLYGY 526
S P + A I+SS + P P ++PPVGP GY+ S + SSLYG
Sbjct: 364 SLIPGLNLNALGIFSSTLPVLSPAAGPRSTMPPVGPAGYNPFLGHSSHL-----SSLYGV 418
Query: 527 GSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGAT 586
S + + + L+ +P AVG +IGK G ++ + +GA+
Sbjct: 419 PPASAIPHQHAAQEQEVAYLF------------IPTQAVGALIGKKGQHIKQLAHFAGAS 466
Query: 587 I-----EMSDSKSSRGDRVALISGTPEQKRAAENLI 617
I EM D+ +R+ +I+GTPE + A+ I
Sbjct: 467 IKVAPAEMPDAT----ERMVIITGTPEAQFKAQGRI 498
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 104/462 (22%), Positives = 193/462 (41%), Gaps = 84/462 (18%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKEDVEV 98
RI+ P +G++IGK G I ++ ++T+++V + GA ++ +TI+S
Sbjct: 200 RIIVPTQYVGAIIGKEGLTIKNVTKQTQSKVDIHRKENAGAAEKPITIHS---------- 249
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
E AA ++++ AN + K E +I+ ++ +IGK
Sbjct: 250 -----TPEGCSAACRMIMEIMQKEAN--------ETKAMEDIPLKIIASNNYIGRLIGKQ 296
Query: 159 GATIKRLRSKTRTSIKVTP-KDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYK 217
G +K++ +T T I ++ +D + + + + G EA A I M K
Sbjct: 297 GRNLKKIEEETGTKITISSLQDLN------IYNNERTITVKGSLEACCNAEVEI---MKK 347
Query: 218 FSPREDIPLETTVREAPPSIIIPSDVPIYPPG------GLYPNADPIL-----PSRSVPS 266
RE + S+I PG G++ + P+L P ++P
Sbjct: 348 L--REAYENDIAAINQQTSLI---------PGLNLNALGIFSSTLPVLSPAAGPRSTMPP 396
Query: 267 ILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQ-------SEELVIRVLCPFNKI 319
+ G A GY N + +S+ LS + G+ AS E+ V + P +
Sbjct: 397 V-GPA------GY----NPFLGHSSHLSSLYGVPPASAIPHQHAAQEQEVAYLFIPTQAV 445
Query: 320 GRVIGKGGGTIKSIRQASGAQIDVD--DTKDNRDECVITVTAIESPDDIKSMA-VEAVLL 376
G +IGK G IK + +GA I V + D + VI E+ K+ + L
Sbjct: 446 GALIGKKGQHIKQLAHFAGASIKVAPAEMPDATERMVIITGTPEA--QFKAQGRIFGKLK 503
Query: 377 LQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADAN 436
+ +++ + + V S G +IGK G +NE++ T A+V + + P + N
Sbjct: 504 EENIFTGKEEVRLETHIKVPSTAAGRVIGKGGKTVNELQSLTSAEVIVPRDQTPD--EKN 561
Query: 437 DELVEVVGEVGSVRDA---LVQIILRLRDDALKDRDGSRNPP 475
+ +V++ G + + A + +II +++ K + G+ P
Sbjct: 562 EVVVKICGHFFANQTAQRKIREIIQQVKQQEQKHQQGAAVSP 603
Score = 43.1 bits (100), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 60/151 (39%), Gaps = 25/151 (16%)
Query: 32 GNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDP-FPGAKDRVVTIYSHV 90
E+ V Y + P +G++IGK G+ I + A +KV P A +R+V I
Sbjct: 430 AQEQEVAY-LFIPTQAVGALIGKKGQHIKQLAHFAGASIKVAPAEMPDATERMVII---- 484
Query: 91 KDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQ 150
+A K I + K + + E I VPS+
Sbjct: 485 ------------------TGTPEAQFKAQGRIFGKLKEENIFTGKEEVRLETHIKVPSTA 526
Query: 151 SANIIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+ +IGK G T+ L+S T + + P+D +
Sbjct: 527 AGRVIGKGGKTVNELQSLTSAEV-IVPRDQT 556
>gi|194306633|ref|NP_001123613.1| poly(rC)-binding protein 3 isoform 2 [Homo sapiens]
gi|119629728|gb|EAX09323.1| poly(rC) binding protein 3, isoform CRA_a [Homo sapiens]
Length = 345
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 151/324 (46%), Gaps = 48/324 (14%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDD-- 365
L IR+L ++G +IGK G T+K +R+ SGA+I++ + N E ++T+T P D
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG---PTDAI 100
Query: 366 IKSMAVEAVLLLQTKINDEDDDT------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
K+ A+ A + IN + VT+RL+V + G +IGK GS I EIR+ T
Sbjct: 101 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 160
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQI-ILRLRDDALKDRDGSRNPPVGA 478
A V+++ P ++ + V + G ++ + QI ++ L ++ + +P +
Sbjct: 161 AQVQVAGDMLP---NSTERAVTISGTPDAIIQCVKQICVVMLEAYTIQGQYAIPHPDLTK 217
Query: 479 DHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGS 538
H L P PLG A G + + SS MG S
Sbjct: 218 LH-----------QLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNL----MGQS---- 258
Query: 539 MSSYSSKLYGGL---PPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSS 595
GL PP T E+ +P + +G +IG+ G+ + IR++SGA I+++++
Sbjct: 259 ---------SGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEG 309
Query: 596 RGDRVALISGTPEQKRAAENLIQA 619
+R I+GTP A+ LI A
Sbjct: 310 SSERQITITGTPANISLAQYLINA 333
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 147/359 (40%), Gaps = 80/359 (22%)
Query: 23 RRINEK-DEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKD 81
RR+ K E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +
Sbjct: 31 RRMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPE 88
Query: 82 RVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIA-----NAVANATDNDKKR 136
R+VTI DA+ K A IA + + + +++
Sbjct: 89 RIVTI----------------------TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATS 126
Query: 137 KEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVL 196
K +++VP+SQ ++IGK G+ IK +R T ++V T + V
Sbjct: 127 KPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNST-------ERAVT 179
Query: 197 ISGESEAVKKALFAISAIM---YKFSPREDIP------LETTVREAPPSIIIPSDVPIYP 247
ISG +A+ + + I +M Y + IP L + P +P
Sbjct: 180 ISGTPDAIIQCVKQICVVMLEAYTIQGQYAIPHPDLTKLHQLAMQQTP----------FP 229
Query: 248 PGGLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEE 307
P G +P P +P + + +L G + + P ST E
Sbjct: 230 PLG---QTNPAFPGEKLP-LHSSEEAQNLMGQSSGLDASPPAST--------------HE 271
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
L I P + IG +IG+ G I IRQ SGAQI + + + E IT+T +P +I
Sbjct: 272 LTI----PNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITG--TPANI 324
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+TIRLL+ K +G IIGK G + ++R+ + A + IS+G+ P + +V + G
Sbjct: 45 TLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCP------ERIVTITGPTD 98
Query: 448 SVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
++ A I + +D ++ + + PPV
Sbjct: 99 AIFKAFAMIAYKFEEDIINSMSNSPATSKPPV 130
>gi|440894425|gb|ELR46887.1| Poly(rC)-binding protein 3 [Bos grunniens mutus]
Length = 374
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 155/339 (45%), Gaps = 52/339 (15%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDD-- 365
L IR+L ++G +IGK G T+K +R+ SGA+I++ + N E ++T+T P D
Sbjct: 49 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG---PTDAI 103
Query: 366 IKSMAVEAVLLLQTKINDEDDDT------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
K+ A+ A + IN + VT+RL+V + G +IGK GS I EIR+ T
Sbjct: 104 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 163
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNP-PVGA 478
A V+++ GD ++ + V + G ++ + QI + + + K P P
Sbjct: 164 AQVQVA-GDM--LPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPAST 220
Query: 479 DHIYSSGTG--------ISMPPLLPSI-------PPVGPLGYDQRADSGSGIGMLSSSSL 523
I++ G I P L + P PLG A G + + SS
Sbjct: 221 PVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEA 280
Query: 524 YGYGSLSMGDSPYGSMSSYSSKLYGGL---PPPLTLEVLVPANAVGKVIGKAGSNLANIR 580
MG S GL PP T E+ +P + +G +IG+ G+ + IR
Sbjct: 281 QNL----MGQS-------------SGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIR 323
Query: 581 KISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQA 619
++SGA I+++++ +R I+GTP A+ LI A
Sbjct: 324 QMSGAQIKIANATEGSSERQITITGTPANISLAQYLINA 362
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 88/352 (25%), Positives = 149/352 (42%), Gaps = 54/352 (15%)
Query: 23 RRINEK-DEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKD 81
R++ K E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +
Sbjct: 34 RKMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPE 91
Query: 82 RVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIA-----NAVANATDNDKKR 136
R+VTI DA+ K A IA + + + +++
Sbjct: 92 RIVTI----------------------TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATS 129
Query: 137 KEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVL 196
K +++VP+SQ ++IGK G+ IK +R T ++V T + V
Sbjct: 130 KPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNST-------ERAVT 182
Query: 197 ISGESEAVKKALFAISAIMYKFSPR-EDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNA 255
ISG +A+ + + I +M + P+ IP P +I + Y G Y
Sbjct: 183 ISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTP---VIFAGGQAYTIQGQYAIP 239
Query: 256 DPILPSRSVPSILGAARVPDL--QGYADTGNTWPVYSTG-----LSLVSGLVGA--SQSE 306
P ++ + P L A G P++S+ + SGL + + +
Sbjct: 240 HPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTH 299
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
EL I P + IG +IG+ G I IRQ SGAQI + + + E IT+T
Sbjct: 300 ELTI----PNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITIT 347
>gi|431893776|gb|ELK03594.1| Poly(rC)-binding protein 3 [Pteropus alecto]
Length = 339
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 95/336 (28%), Positives = 154/336 (45%), Gaps = 46/336 (13%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDD-- 365
L IR+L ++G +IGK G T+K +R SGA+I++ + N E ++T+T P D
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMRDESGARINISE--GNCPERIVTITG---PTDAI 68
Query: 366 IKSMAVEAVLLLQTKINDEDDDT------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
K+ A+ A + IN + VT+RL+V + G +IGK GS I EIR+ T
Sbjct: 69 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 128
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNP-PVGA 478
A V+++ P ++ + V + G ++ + QI + + + K P P
Sbjct: 129 AQVQVAGDMLP---NSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPAST 185
Query: 479 DHIYSSGTG--------ISMPPLLPSI-------PPVGPLGYDQRADSGSGIGMLSSSSL 523
I++ G I P L + P PLG A G + + SS
Sbjct: 186 PVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLSLHSSEEA 245
Query: 524 YGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKIS 583
MG P G +S PP T E+ +P + +G +IG+ G+ + IR++S
Sbjct: 246 QNL----MGQ-PSGLDAS---------PPASTHELTIPNDLIGCIIGRQGTKINEIRQMS 291
Query: 584 GATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQA 619
GA I+++++ +R I+GTP A+ LI A
Sbjct: 292 GAQIKIANATEGSSERQITITGTPANISLAQYLINA 327
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 145/353 (41%), Gaps = 69/353 (19%)
Query: 29 DEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYS 88
E G ++ R+L +GS+IGK G+ + +R E+ AR+ + + +R+VTI
Sbjct: 6 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMRDESGARINISEG--NCPERIVTI-- 61
Query: 89 HVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIA-----NAVANATDNDKKRKEKEECQ 143
DA+ K A IA + + + +++ K +
Sbjct: 62 --------------------TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLR 101
Query: 144 ILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEA 203
++VP+SQ ++IGK G+ IK +R T ++V T + V ISG +A
Sbjct: 102 LVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNST-------ERAVTISGTPDA 154
Query: 204 VKKALFAISAIMYKFSPR-EDIPLETTVREAPPSIIIPSDVPIYPPGGLY--PNADPILP 260
+ + + I +M + P+ IP P +I + Y G Y P+ D +
Sbjct: 155 IIQCVKQICVVMLESPPKGATIPYRPKPASTP---VIFAGGQAYTIQGQYAIPHPDQLTK 211
Query: 261 SRSVPSILGAARVPDLQGYADTGNTWPVY-STGLSLVS-----GLVGA---------SQS 305
L + P + G T P + LSL S L+G + +
Sbjct: 212 LHQ----LAMQQTP----FPPLGQTNPAFPGEKLSLHSSEEAQNLMGQPSGLDASPPAST 263
Query: 306 EELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
EL I P + IG +IG+ G I IRQ SGAQI + + + E IT+T
Sbjct: 264 HELTI----PNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITIT 312
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 9/92 (9%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+TIRLL+ K +G IIGK G + ++R + A + IS+G+ P + +V + G
Sbjct: 13 TLTIRLLMHGKEVGSIIGKKGETVKKMRDESGARINISEGNCP------ERIVTITGPTD 66
Query: 448 SVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
++ A I + +D ++ + + PPV
Sbjct: 67 AIFKAFAMIAYKFEEDIINSMSNSPATSKPPV 98
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 40/66 (60%), Gaps = 3/66 (4%)
Query: 302 ASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDV-DDTKDNRDECVITVTAI 360
A+ + +R++ P ++ G +IGKGG IK IR+++GAQ+ V D N E +T++
Sbjct: 92 ATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISG- 150
Query: 361 ESPDDI 366
+PD I
Sbjct: 151 -TPDAI 155
>gi|148699887|gb|EDL31834.1| poly(rC) binding protein 3, isoform CRA_c [Mus musculus]
Length = 373
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 95/339 (28%), Positives = 156/339 (46%), Gaps = 53/339 (15%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDD-- 365
L IR+L ++G +IGK G T+K +R+ SGA+I++ + N E ++T+T P D
Sbjct: 49 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG---PTDAI 103
Query: 366 IKSMAVEAVLLLQTKINDEDDDT------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
K+ A+ A + IN + VT+RL+V + G +IGK GS I EIR+ T
Sbjct: 104 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 163
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNP-PVGA 478
A V+++ GD ++ + V + G ++ + QI + + + K P P
Sbjct: 164 AQVQVA-GDM--LPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPAST 220
Query: 479 DHIYSSGTGISMPPLLPSIP---------------PVGPLGYDQRADSGSGIGMLSSSSL 523
I++ G ++ +IP P PLG A G + + SS
Sbjct: 221 PVIFAGGQAYTIQGQY-AIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEA 279
Query: 524 YGYGSLSMGDSPYGSMSSYSSKLYGGL---PPPLTLEVLVPANAVGKVIGKAGSNLANIR 580
MG S GL PP T E+ +P + +G +IG+ G+ + IR
Sbjct: 280 QNL----MGQS-------------SGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIR 322
Query: 581 KISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQA 619
++SGA I+++++ +R I+GTP A+ LI A
Sbjct: 323 QMSGAQIKIANATEGSSERQITITGTPANISLAQYLINA 361
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 149/352 (42%), Gaps = 54/352 (15%)
Query: 29 DEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYS 88
E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R+VTI
Sbjct: 41 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTI-- 96
Query: 89 HVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIA-----NAVANATDNDKKRKEKEECQ 143
DA+ K A IA + + + +++ K +
Sbjct: 97 --------------------TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLR 136
Query: 144 ILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEA 203
++VP+SQ ++IGK G+ IK +R T ++V T + V ISG +A
Sbjct: 137 LVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNST-------ERAVTISGTPDA 189
Query: 204 VKKALFAISAIMYKFSPR-EDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSR 262
+ + + I +M + P+ IP P +I + Y G Y P L
Sbjct: 190 IIQCVKQICVVMLESPPKGATIPYRPKPASTP---VIFAGGQAYTIQGQYAIPHPDLTKL 246
Query: 263 SVPSILGAARVPDLQ-GYADTGNTWPVYSTG-----LSLVSGLVGA--SQSEELVIRVLC 314
++ P Q A G P++S+ + SGL + + + EL I
Sbjct: 247 HQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTI---- 302
Query: 315 PFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
P + IG +IG+ G I IRQ SGAQI + + + E IT+T +P +I
Sbjct: 303 PNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITG--TPANI 352
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+TIRLL+ K +G IIGK G + ++R+ + A + IS+G+ P + +V + G
Sbjct: 48 TLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCP------ERIVTITGPTD 101
Query: 448 SVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
++ A I + +D ++ + + PPV
Sbjct: 102 AIFKAFAMIAYKFEEDIINSMSNSPATSKPPV 133
>gi|148699884|gb|EDL31831.1| poly(rC) binding protein 3, isoform CRA_b [Mus musculus]
gi|148699885|gb|EDL31832.1| poly(rC) binding protein 3, isoform CRA_b [Mus musculus]
gi|148699886|gb|EDL31833.1| poly(rC) binding protein 3, isoform CRA_b [Mus musculus]
gi|148699889|gb|EDL31836.1| poly(rC) binding protein 3, isoform CRA_b [Mus musculus]
gi|148699890|gb|EDL31837.1| poly(rC) binding protein 3, isoform CRA_b [Mus musculus]
gi|149043678|gb|EDL97129.1| rCG61051, isoform CRA_b [Rattus norvegicus]
gi|149043679|gb|EDL97130.1| rCG61051, isoform CRA_b [Rattus norvegicus]
gi|149043680|gb|EDL97131.1| rCG61051, isoform CRA_b [Rattus norvegicus]
Length = 339
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 95/339 (28%), Positives = 154/339 (45%), Gaps = 52/339 (15%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDD-- 365
L IR+L ++G +IGK G T+K +R+ SGA+I++ + N E ++T+T P D
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG---PTDAI 68
Query: 366 IKSMAVEAVLLLQTKINDEDDDT------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
K+ A+ A + IN + VT+RL+V + G +IGK GS I EIR+ T
Sbjct: 69 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 128
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNP-PVGA 478
A V+++ P ++ + V + G ++ + QI + + + K P P
Sbjct: 129 AQVQVAGDMLP---NSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPAST 185
Query: 479 DHIYSSGTG--------ISMPPLLPSI-------PPVGPLGYDQRADSGSGIGMLSSSSL 523
I++ G I P L + P PLG A G + + SS
Sbjct: 186 PVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEA 245
Query: 524 YGYGSLSMGDSPYGSMSSYSSKLYGGL---PPPLTLEVLVPANAVGKVIGKAGSNLANIR 580
MG S GL PP T E+ +P + +G +IG+ G+ + IR
Sbjct: 246 QNL----MGQS-------------SGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIR 288
Query: 581 KISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQA 619
++SGA I+++++ +R I+GTP A+ LI A
Sbjct: 289 QMSGAQIKIANATEGSSERQITITGTPANISLAQYLINA 327
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 149/353 (42%), Gaps = 55/353 (15%)
Query: 29 DEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYS 88
E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R+VTI
Sbjct: 6 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTI-- 61
Query: 89 HVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIA-----NAVANATDNDKKRKEKEECQ 143
DA+ K A IA + + + +++ K +
Sbjct: 62 --------------------TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLR 101
Query: 144 ILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEA 203
++VP+SQ ++IGK G+ IK +R T ++V T + V ISG +A
Sbjct: 102 LVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNST-------ERAVTISGTPDA 154
Query: 204 VKKALFAISAIMYKFSPR-EDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSR 262
+ + + I +M + P+ IP P +I + Y G Y P ++
Sbjct: 155 IIQCVKQICVVMLESPPKGATIPYRPKPASTP---VIFAGGQAYTIQGQYAIPHPDQLTK 211
Query: 263 SVPSILGAARVPDL--QGYADTGNTWPVYSTG-----LSLVSGLVGA--SQSEELVIRVL 313
+ P L A G P++S+ + SGL + + + EL I
Sbjct: 212 LHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTI--- 268
Query: 314 CPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
P + IG +IG+ G I IRQ SGAQI + + + E IT+T +P +I
Sbjct: 269 -PNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITG--TPANI 318
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+TIRLL+ K +G IIGK G + ++R+ + A + IS+G+ P + +V + G
Sbjct: 13 TLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCP------ERIVTITGPTD 66
Query: 448 SVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
++ A I + +D ++ + + PPV
Sbjct: 67 AIFKAFAMIAYKFEEDIINSMSNSPATSKPPV 98
>gi|426218395|ref|XP_004003432.1| PREDICTED: poly(rC)-binding protein 3 isoform 1 [Ovis aries]
Length = 345
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 151/324 (46%), Gaps = 48/324 (14%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDD-- 365
L IR+L ++G +IGK G T+K +R+ SGA+I++ + N E ++T+T P D
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG---PTDAI 100
Query: 366 IKSMAVEAVLLLQTKINDEDDDT------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
K+ A+ A + IN + VT+RL+V + G +IGK GS I EIR+ T
Sbjct: 101 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 160
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQI-ILRLRDDALKDRDGSRNPPVGA 478
A V+++ P ++ + V + G ++ + QI ++ L ++ + +P +
Sbjct: 161 AQVQVAGDMLP---NSTERAVTISGTPDAIIQCVKQICVVMLEAYTIQGQYAIPHPDLTK 217
Query: 479 DHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGS 538
H L P PLG A G + + SS MG S
Sbjct: 218 LH-----------QLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNL----MGQS---- 258
Query: 539 MSSYSSKLYGGL---PPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSS 595
GL PP T E+ +P + +G +IG+ G+ + IR++SGA I+++++
Sbjct: 259 ---------SGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEG 309
Query: 596 RGDRVALISGTPEQKRAAENLIQA 619
+R I+GTP A+ LI A
Sbjct: 310 SSERQITITGTPANISLAQYLINA 333
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 88/359 (24%), Positives = 147/359 (40%), Gaps = 80/359 (22%)
Query: 23 RRINEK-DEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKD 81
R++ K E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +
Sbjct: 31 RKMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPE 88
Query: 82 RVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIA-----NAVANATDNDKKR 136
R+VTI DA+ K A IA + + + +++
Sbjct: 89 RIVTI----------------------TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATS 126
Query: 137 KEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVL 196
K +++VP+SQ ++IGK G+ IK +R T ++V T + V
Sbjct: 127 KPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNST-------ERAVT 179
Query: 197 ISGESEAVKKALFAISAIM---YKFSPREDIP------LETTVREAPPSIIIPSDVPIYP 247
ISG +A+ + + I +M Y + IP L + P +P
Sbjct: 180 ISGTPDAIIQCVKQICVVMLEAYTIQGQYAIPHPDLTKLHQLAMQQTP----------FP 229
Query: 248 PGGLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEE 307
P G +P P +P + + +L G + + P ST E
Sbjct: 230 PLG---QTNPAFPGEKLP-LHSSEEAQNLMGQSSGLDASPPAST--------------HE 271
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
L I P + IG +IG+ G I IRQ SGAQI + + + E IT+T +P +I
Sbjct: 272 LTI----PNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITG--TPANI 324
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+TIRLL+ K +G IIGK G + ++R+ + A + IS+G+ P + +V + G
Sbjct: 45 TLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCP------ERIVTITGPTD 98
Query: 448 SVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
++ A I + +D ++ + + PPV
Sbjct: 99 AIFKAFAMIAYKFEEDIINSMSNSPATSKPPV 130
>gi|9957165|gb|AAG09240.1|AF176329_1 alphaCP-3 [Homo sapiens]
Length = 339
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 95/339 (28%), Positives = 154/339 (45%), Gaps = 52/339 (15%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDD-- 365
L IR+L ++G +IGK G T+K +R+ SGA+I++ + N E ++T+T P D
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG---PTDAI 68
Query: 366 IKSMAVEAVLLLQTKINDEDDDT------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
K+ A+ A + IN + VT+RL+V + G +IGK GS I EIR+ T
Sbjct: 69 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 128
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNP-PVGA 478
A V+++ P ++ + V + G ++ + QI + + + K P P
Sbjct: 129 AQVQVAGDMLP---NSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPAST 185
Query: 479 DHIYSSGTG--------ISMPPLLPSI-------PPVGPLGYDQRADSGSGIGMLSSSSL 523
I++ G I P L + P PLG A G + + SS
Sbjct: 186 PVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEA 245
Query: 524 YGYGSLSMGDSPYGSMSSYSSKLYGGL---PPPLTLEVLVPANAVGKVIGKAGSNLANIR 580
MG S GL PP T E+ +P + +G +IG+ G+ + IR
Sbjct: 246 QNL----MGQS-------------SGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIR 288
Query: 581 KISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQA 619
++SGA I+++++ +R I+GTP A+ LI A
Sbjct: 289 QMSGAQIKIANATEGSSERQITITGTPANISLAQYLINA 327
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 149/353 (42%), Gaps = 55/353 (15%)
Query: 29 DEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYS 88
E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R+VTI
Sbjct: 6 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTI-- 61
Query: 89 HVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIA-----NAVANATDNDKKRKEKEECQ 143
DA+ K A IA + + + +++ K +
Sbjct: 62 --------------------TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLR 101
Query: 144 ILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEA 203
++VP+SQ ++IGK G+ IK +R T ++V T + V ISG +A
Sbjct: 102 LVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNST-------ERAVTISGTPDA 154
Query: 204 VKKALFAISAIMYKFSPR-EDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSR 262
+ + + I +M + P+ IP P +I + Y G Y P ++
Sbjct: 155 IIQCVKQICVVMLESPPKGATIPYRPKPASTP---VIFAGGQAYTIQGQYAIPHPDQLTK 211
Query: 263 SVPSILGAARVPDL--QGYADTGNTWPVYSTG-----LSLVSGLVGA--SQSEELVIRVL 313
+ P L A G P++S+ + SGL + + + EL I
Sbjct: 212 LHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTI--- 268
Query: 314 CPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
P + IG +IG+ G I IRQ SGAQI + + + E IT+T +P +I
Sbjct: 269 -PNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITG--TPANI 318
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+TIRLL+ K +G IIGK G + ++R+ + A + IS+G+ P + +V + G
Sbjct: 13 TLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCP------ERIVTITGPTD 66
Query: 448 SVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
++ A I + +D ++ + + PPV
Sbjct: 67 AIFKAFAMIAYKFEEDIINSMSNSPATSKPPV 98
>gi|15082311|gb|AAH12061.1| PCBP3 protein [Homo sapiens]
Length = 313
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 151/324 (46%), Gaps = 48/324 (14%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDD-- 365
L IR+L ++G +IGK G T+K +R+ SGA+I++ + N E ++T+T P D
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG---PTDAI 68
Query: 366 IKSMAVEAVLLLQTKINDEDDDT------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
K+ A+ A + IN + VT+RL+V + G +IGK GS I EIR+ T
Sbjct: 69 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 128
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQI-ILRLRDDALKDRDGSRNPPVGA 478
A V+++ P ++ + V + G ++ + QI ++ L ++ + +P +
Sbjct: 129 AQVQVAGDMLP---NSTERAVTISGTPDAIIQCVKQICVVMLEAYTIQGQYAIPHPDLTK 185
Query: 479 DHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGS 538
H L P PLG A G + + SS MG S
Sbjct: 186 LH-----------QLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNL----MGQS---- 226
Query: 539 MSSYSSKLYGGL---PPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSS 595
GL PP T E+ +P + +G +IG+ G+ + IR++SGA I+++++
Sbjct: 227 ---------SGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEG 277
Query: 596 RGDRVALISGTPEQKRAAENLIQA 619
+R I+GTP A+ LI A
Sbjct: 278 SSERQITITGTPANISLAQYLINA 301
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 143/352 (40%), Gaps = 79/352 (22%)
Query: 29 DEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYS 88
E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R+VTI
Sbjct: 6 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTI-- 61
Query: 89 HVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIA-----NAVANATDNDKKRKEKEECQ 143
DA+ K A IA + + + +++ K +
Sbjct: 62 --------------------TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLR 101
Query: 144 ILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEA 203
++VP+SQ ++IGK G+ IK +R T ++V T + V ISG +A
Sbjct: 102 LVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNST-------ERAVTISGTPDA 154
Query: 204 VKKALFAISAIM---YKFSPREDIP------LETTVREAPPSIIIPSDVPIYPPGGLYPN 254
+ + + I +M Y + IP L + P +PP G
Sbjct: 155 IIQCVKQICVVMLEAYTIQGQYAIPHPDLTKLHQLAMQQTP----------FPPLG---Q 201
Query: 255 ADPILPSRSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLC 314
+P P +P + + +L G + + P ST EL I
Sbjct: 202 TNPAFPGEKLP-LHSSEEAQNLMGQSSGLDASPPAST--------------HELTI---- 242
Query: 315 PFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
P + IG +IG+ G I IRQ SGAQI + + + E IT+T +P +I
Sbjct: 243 PNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITG--TPANI 292
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+TIRLL+ K +G IIGK G + ++R+ + A + IS+G+ P + +V + G
Sbjct: 13 TLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCP------ERIVTITGPTD 66
Query: 448 SVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
++ A I + +D ++ + + PPV
Sbjct: 67 AIFKAFAMIAYKFEEDIINSMSNSPATSKPPV 98
>gi|16924113|gb|AAL31692.1|AC092390_13 putative RNA binding protein [Oryza sativa Japonica Group]
gi|108709929|gb|ABF97724.1| KH domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|215695360|dbj|BAG90551.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625405|gb|EEE59537.1| hypothetical protein OsJ_11804 [Oryza sativa Japonica Group]
Length = 510
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 115/220 (52%), Gaps = 30/220 (13%)
Query: 8 YRSQRDNDRDG--KNQKRRINEKDEK--GNEESVIYRILCPDGVIGSVIGKSGKVINSIR 63
Y+ + DN +G K Q E D+K G ++RIL P +G++IG+ G+ I +
Sbjct: 75 YQEESDNAYNGEVKQQDSLPVEADKKWPGWPGESVFRILIPAQKVGAIIGRKGEFIKKMC 134
Query: 64 QETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIA 123
+E++AR+K++D PG +R V I KD+ D P+ A D L +V+ I
Sbjct: 135 EESKARIKILDGPPGVPERTVMI--SAKDEPDA----------PISPAMDGLFRVYKRI- 181
Query: 124 NAVANATDNDKKRKEKE-----ECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPK 178
+ +D D + E+ ++LVP+SQ+ ++IGK GATIK ++ +++ +++
Sbjct: 182 ---TDGSDGDSGQPERNISNVGPTRLLVPASQAGSLIGKQGATIKSIQDSSKSIVRIV-- 236
Query: 179 DASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKF 218
E A+ D V I GE V+KAL +I++ + KF
Sbjct: 237 ---ETLPLVALNDDRVVEIQGEPVGVQKALESIASHLRKF 273
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 82/166 (49%), Gaps = 12/166 (7%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
E V R+L P K+G +IG+ G IK + + S A+I + D E + ++A + PD
Sbjct: 107 ESVFRILIPAQKVGAIIGRKGEFIKKMCEESKARIKILDGPPGVPERTVMISAKDEPDAP 166
Query: 367 KSMAVEAVLLLQTKINDEDD-----------DTVTIRLLVSSKVIGCIIGKSGSIINEIR 415
S A++ + + +I D D + RLLV + G +IGK G+ I I+
Sbjct: 167 ISPAMDGLFRVYKRITDGSDGDSGQPERNISNVGPTRLLVPASQAGSLIGKQGATIKSIQ 226
Query: 416 KRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLR 461
+K+ VRI + P A +D +VE+ GE V+ AL I LR
Sbjct: 227 DSSKSIVRIVE-TLPLVALNDDRVVEIQGEPVGVQKALESIASHLR 271
>gi|322792902|gb|EFZ16735.1| hypothetical protein SINV_14612 [Solenopsis invicta]
Length = 555
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 153/333 (45%), Gaps = 45/333 (13%)
Query: 296 VSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVI 355
SGL G+ + + +R+L + +G +IG+ G TI+ I Q + A++DV KDN
Sbjct: 100 FSGLPGSGRQTDFPLRILVQSDMVGAIIGRQGTTIRQITQLTRARVDVHR-KDNVGSLEK 158
Query: 356 TVTAIESPDDIKSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIR 415
+T +P++ + + + ++Q + N+ + +T+++L + +IG IIGK G+ I I
Sbjct: 159 AITIYGNPENCTNACKKILEVMQQEANNTNKGEITLKILAHNNLIGRIIGKGGNTIKRIM 218
Query: 416 KRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPP 475
+ T + +S + + + ++ V G + ++ A I +LR D
Sbjct: 219 QDTDTKITVSSINDINSFNL-ERIITVKGSIDNMSKAESMISSKLRQSYENDLQ------ 271
Query: 476 VGADHIYSSGTGISMPP---LLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMG 532
+M P + P + P+ + S G G+ YGS G
Sbjct: 272 -------------AMAPQSMMFPGLHPMAMMSTAGMGYSSRGPGL--------YGS---G 307
Query: 533 DSPYGSMSSYSSKLYGGLPPPLTLE---VLVPANAVGKVIGKAGSNLANIRKISGATI-- 587
+PY SS ++ G+P T E + +P N+VG +IG GS++ NI + SGA++
Sbjct: 308 PAPYPYQSSLPTQQ--GVPASDTQETTFLYIPNNSVGAIIGTKGSHIRNIIRFSGASVKI 365
Query: 588 ---EMSDSKSSRGDRVALISGTPEQKRAAENLI 617
E + +R I G+PE + A+ LI
Sbjct: 366 APLEQDKPAEQQTERKVTIVGSPESQWKAQYLI 398
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 112/431 (25%), Positives = 184/431 (42%), Gaps = 68/431 (15%)
Query: 32 GNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDP-FPGAKDRVVTIYSHV 90
G + RIL ++G++IG+ G I I Q TRARV V G+ ++ +TIY
Sbjct: 107 GRQTDFPLRILVQSDMVGAIIGRQGTTIRQITQLTRARVDVHRKDNVGSLEKAITIYG-- 164
Query: 91 KDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQ 150
+ E A +L+V AN K + +IL ++
Sbjct: 165 -------------NPENCTNACKKILEVMQQEAN---------NTNKGEITLKILAHNNL 202
Query: 151 SANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFA 210
IIGK G TIKR+ T T I V S + + + + G + + KA
Sbjct: 203 IGRIIGKGGNTIKRIMQDTDTKITV-----SSINDINSFNLERIITVKGSIDNMSKAESM 257
Query: 211 ISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGA 270
IS+ + + S D+ AP S++ P GL+P A S + +
Sbjct: 258 ISSKLRQ-SYENDLQAM-----APQSMMFP---------GLHPMA-----MMSTAGMGYS 297
Query: 271 ARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTI 330
+R P L Y +P Y + L G V AS ++E + P N +G +IG G I
Sbjct: 298 SRGPGL--YGSGPAPYP-YQSSLPTQQG-VPASDTQETTF-LYIPNNSVGAIIGTKGSHI 352
Query: 331 KSIRQASGAQIDV---DDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKINDE--- 384
++I + SGA + + + K + VT + SP+ +A L+ K+ +E
Sbjct: 353 RNIIRFSGASVKIAPLEQDKPAEQQTERKVTIVGSPES----QWKAQYLIFEKMREEGYV 408
Query: 385 ---DDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVE 441
+D +TI +LV S +G IIGK G + E+++ T + +++S+ + + V
Sbjct: 409 AGTEDVRLTIEILVPSTQVGRIIGKGGQNVRELQRVTGSVIKLSEQQATPPSAEEETTVH 468
Query: 442 VVGEVGSVRDA 452
++G SV+ A
Sbjct: 469 IIGPFFSVQSA 479
Score = 46.2 bits (108), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 34/42 (80%)
Query: 554 LTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSS 595
LT+E+LVP+ VG++IGK G N+ +++++G+ I++S+ +++
Sbjct: 416 LTIEILVPSTQVGRIIGKGGQNVRELQRVTGSVIKLSEQQAT 457
>gi|297601352|ref|NP_001050707.2| Os03g0627500 [Oryza sativa Japonica Group]
gi|255674723|dbj|BAF12621.2| Os03g0627500, partial [Oryza sativa Japonica Group]
Length = 512
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 115/220 (52%), Gaps = 30/220 (13%)
Query: 8 YRSQRDNDRDG--KNQKRRINEKDEK--GNEESVIYRILCPDGVIGSVIGKSGKVINSIR 63
Y+ + DN +G K Q E D+K G ++RIL P +G++IG+ G+ I +
Sbjct: 77 YQEESDNAYNGEVKQQDSLPVEADKKWPGWPGESVFRILIPAQKVGAIIGRKGEFIKKMC 136
Query: 64 QETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIA 123
+E++AR+K++D PG +R V I KD+ D P+ A D L +V+ I
Sbjct: 137 EESKARIKILDGPPGVPERTVMI--SAKDEPDA----------PISPAMDGLFRVYKRI- 183
Query: 124 NAVANATDNDKKRKEKE-----ECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPK 178
+ +D D + E+ ++LVP+SQ+ ++IGK GATIK ++ +++ +++
Sbjct: 184 ---TDGSDGDSGQPERNISNVGPTRLLVPASQAGSLIGKQGATIKSIQDSSKSIVRIV-- 238
Query: 179 DASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKF 218
E A+ D V I GE V+KAL +I++ + KF
Sbjct: 239 ---ETLPLVALNDDRVVEIQGEPVGVQKALESIASHLRKF 275
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 82/166 (49%), Gaps = 12/166 (7%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
E V R+L P K+G +IG+ G IK + + S A+I + D E + ++A + PD
Sbjct: 109 ESVFRILIPAQKVGAIIGRKGEFIKKMCEESKARIKILDGPPGVPERTVMISAKDEPDAP 168
Query: 367 KSMAVEAVLLLQTKINDEDD-----------DTVTIRLLVSSKVIGCIIGKSGSIINEIR 415
S A++ + + +I D D + RLLV + G +IGK G+ I I+
Sbjct: 169 ISPAMDGLFRVYKRITDGSDGDSGQPERNISNVGPTRLLVPASQAGSLIGKQGATIKSIQ 228
Query: 416 KRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLR 461
+K+ VRI + P A +D +VE+ GE V+ AL I LR
Sbjct: 229 DSSKSIVRIVE-TLPLVALNDDRVVEIQGEPVGVQKALESIASHLR 273
>gi|357121091|ref|XP_003562255.1| PREDICTED: poly(rC)-binding protein 1-like [Brachypodium
distachyon]
Length = 518
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 95/362 (26%), Positives = 161/362 (44%), Gaps = 71/362 (19%)
Query: 309 VIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKS 368
V R+L P +K+G +IG+ G IK + + S A+I + D E + ++A + PD+ S
Sbjct: 115 VFRILVPVHKVGAIIGRKGEFIKRMCEESKARIKILDGPPGVPERAVMISAKDEPDEQIS 174
Query: 369 MAVEAVLLLQTKINDEDDDTV-----------TIRLLVSSKVIGCIIGKSGSIINEIRKR 417
A++ +L + +I D D RLLV + G +IGK G+ I I+
Sbjct: 175 PAMDGLLRIHKRIADGSDGEFGQTQRGTGTMGPTRLLVPASQAGSLIGKQGATIKSIQDS 234
Query: 418 TKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQI------------ILRLRDDAL 465
+KA VRI + + P A +D +VE+ GE SV+ A+ I +L L + +
Sbjct: 235 SKAVVRIVE-NVPPVALNDDRVVEIQGEPLSVQKAVELIASHLRKFLVDHSVLPLFEQQM 293
Query: 466 KDRDGSRNPPVGADHIYS------------------SGTGISMPPL-------LPSIPPV 500
K R P+ A + +G MPP P +PP+
Sbjct: 294 KMHSMPREQPMPAPQQWGPPQPWGPPPNHPPGGPGYAGNPQFMPPRPQDNYYPPPDVPPM 353
Query: 501 GPLGYDQRADSG-SGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVL 559
+++ G S G + S G + G+ P ++S +T +
Sbjct: 354 -----EKQPHYGISAYGREAPS-----GVSASGNQPPSHVASQ-----------VTHNMQ 392
Query: 560 VPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQA 619
+P + VIG AG++++ IR+ SGA + + +S+ + G+ I G+ Q + A+ LIQ
Sbjct: 393 IPLSYADAVIGAAGASISYIRRHSGAAVTIQESRGAPGEMNVEIIGSASQVQTAQQLIQN 452
Query: 620 FI 621
F+
Sbjct: 453 FM 454
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 94/389 (24%), Positives = 170/389 (43%), Gaps = 77/389 (19%)
Query: 11 QRDNDRDGK-----NQKRRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQE 65
Q +N +G+ N + N+K G ++RIL P +G++IG+ G+ I + +E
Sbjct: 83 QEENAFNGEVKQQDNLQVEANDKRWPGWPGDSVFRILVPVHKVGAIIGRKGEFIKRMCEE 142
Query: 66 TRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANA 125
++AR+K++D PG +R V I + KD+ D E + A D LL++H I
Sbjct: 143 SKARIKILDGPPGVPERAVMISA--KDEPD----------EQISPAMDGLLRIHKRI--- 187
Query: 126 VANATDNDKKRKEK-----EECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDA 180
A+ +D + + ++ ++LVP+SQ+ ++IGK GATIK ++ ++ +++
Sbjct: 188 -ADGSDGEFGQTQRGTGTMGPTRLLVPASQAGSLIGKQGATIKSIQDSSKAVVRIV---- 242
Query: 181 SEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKF------SP--REDIPLETTVRE 232
E A+ D V I GE +V+KA+ I++ + KF P + + + + RE
Sbjct: 243 -ENVPPVALNDDRVVEIQGEPLSVQKAVELIASHLRKFLVDHSVLPLFEQQMKMHSMPRE 301
Query: 233 AP-PSIII-----------------------PSDVPIYPPGGLYPNADPILPSRSVPSIL 268
P P+ P +P P YP D + P P
Sbjct: 302 QPMPAPQQWGPPQPWGPPPNHPPGGPGYAGNPQFMPPRPQDNYYPPPD-VPPMEKQPHY- 359
Query: 269 GAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGG 328
G + G P +G+S + + ++ + P + VIG G
Sbjct: 360 ---------GISAYGREAP---SGVSASGNQPPSHVASQVTHNMQIPLSYADAVIGAAGA 407
Query: 329 TIKSIRQASGAQIDVDDTKDNRDECVITV 357
+I IR+ SGA + + +++ E + +
Sbjct: 408 SISYIRRHSGAAVTIQESRGAPGEMNVEI 436
>gi|332025247|gb|EGI65421.1| Insulin-like growth factor 2 mRNA-binding protein 1 [Acromyrmex
echinatior]
Length = 568
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 153/333 (45%), Gaps = 45/333 (13%)
Query: 296 VSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVI 355
+GL G+ + + +R+L + +G +IG+ G TI+ I Q + A++DV KDN
Sbjct: 109 FAGLPGSGRQTDFPLRILVQSDMVGAIIGRQGSTIRQITQMTRARVDVHR-KDNVGSLEK 167
Query: 356 TVTAIESPDDIKSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIR 415
+T +P++ + + + ++Q + N+ + +T+++L + +IG IIGK G+ I I
Sbjct: 168 AITIYGNPENCTNACKKILEVMQQEANNTNKGEITLKILAHNNLIGRIIGKGGNTIKRIM 227
Query: 416 KRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPP 475
+ T + +S + + + ++ V G + ++ A I +LR D
Sbjct: 228 QDTDTKITVSSINDINSFNL-ERIITVKGSIDNMSKAESMISSKLRQSYENDLQ------ 280
Query: 476 VGADHIYSSGTGISMPP---LLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMG 532
+M P + P + P+ + S G G+ YGS G
Sbjct: 281 -------------AMAPQSMMFPGLHPMAMMSTAGMGYSSRGPGL--------YGS---G 316
Query: 533 DSPYGSMSSYSSKLYGGLPPPLTLE---VLVPANAVGKVIGKAGSNLANIRKISGATI-- 587
+PY SS ++ G+P T E + +P N+VG +IG GS++ NI + SGA++
Sbjct: 317 PAPYPYQSSLPTQ--QGVPASDTQETTFLYIPNNSVGAIIGTKGSHIRNIIRFSGASVKI 374
Query: 588 ---EMSDSKSSRGDRVALISGTPEQKRAAENLI 617
E + +R I G+PE + A+ LI
Sbjct: 375 APLEQDKPAEQQTERKVTIVGSPESQWKAQYLI 407
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 111/423 (26%), Positives = 182/423 (43%), Gaps = 68/423 (16%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDP-FPGAKDRVVTIYSHVKDKEDVEV 98
RIL ++G++IG+ G I I Q TRARV V G+ ++ +TIY
Sbjct: 124 RILVQSDMVGAIIGRQGSTIRQITQMTRARVDVHRKDNVGSLEKAITIYG---------- 173
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
+ E A +L+V AN K + +IL ++ IIGK
Sbjct: 174 -----NPENCTNACKKILEVMQQEAN---------NTNKGEITLKILAHNNLIGRIIGKG 219
Query: 159 GATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKF 218
G TIKR+ T T I V S + + + + G + + KA IS+ + +
Sbjct: 220 GNTIKRIMQDTDTKITV-----SSINDINSFNLERIITVKGSIDNMSKAESMISSKLRQ- 273
Query: 219 SPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQG 278
S D+ AP S++ P GL+P A S + ++R P L
Sbjct: 274 SYENDLQAM-----APQSMMFP---------GLHPMA-----MMSTAGMGYSSRGPGL-- 312
Query: 279 YADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASG 338
Y +P Y + L G V AS ++E + P N +G +IG G I++I + SG
Sbjct: 313 YGSGPAPYP-YQSSLPTQQG-VPASDTQETTF-LYIPNNSVGAIIGTKGSHIRNIIRFSG 369
Query: 339 AQIDV---DDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKINDE------DDDTV 389
A + + + K + VT + SP+ +A L+ K+ +E +D +
Sbjct: 370 ASVKIAPLEQDKPAEQQTERKVTIVGSPES----QWKAQYLIFEKMREEGYVAGTEDVRL 425
Query: 390 TIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSV 449
TI +LV S +G IIGK G + E+++ T + +++S+ + + V ++G SV
Sbjct: 426 TIEILVPSTQVGRIIGKGGQNVRELQRVTGSVIKLSEQQATPPSAEEETTVHIIGPFFSV 485
Query: 450 RDA 452
+ A
Sbjct: 486 QSA 488
Score = 46.2 bits (108), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 34/42 (80%)
Query: 554 LTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSS 595
LT+E+LVP+ VG++IGK G N+ +++++G+ I++S+ +++
Sbjct: 425 LTIEILVPSTQVGRIIGKGGQNVRELQRVTGSVIKLSEQQAT 466
>gi|148223740|ref|NP_001083021.1| poly(rC)-binding protein 3 [Danio rerio]
gi|134025331|gb|AAI35089.1| Zgc:162999 protein [Danio rerio]
Length = 350
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 90/325 (27%), Positives = 154/325 (47%), Gaps = 21/325 (6%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDD-- 365
L IR+L ++G +IGK G T+K +R+ S A+I+V + N E ++T+T P D
Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREESSARINVSE--GNCPERIVTITG---PTDAI 70
Query: 366 IKSMAVEAVLLLQTKINDEDDDT------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
K+ A+ A + IN + VT+RL+V + G +IGK GS I E+R+ T
Sbjct: 71 FKAFAMIAYKFEEDIINSMSNSQATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTG 130
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNP-PVGA 478
A V+++ P ++ + V + G ++ + QI + + + K P P A
Sbjct: 131 AQVQVAGDMLP---NSTERAVTISGTPEAIIQCVKQICVVMLESPPKGATIPYRPKPATA 187
Query: 479 DHIYSSGTGISMPPLLPSIPPVGPLGYDQR--ADSGSGIGMLSSSSLYGYGSLSMGDSPY 536
I+S G + P+ + L Q A + G + L L+M +P+
Sbjct: 188 PVIFSGGQVRADTLTAPATANLSLLLQHQPLPAYTIQGQYAIPHPDLTKLHQLAMQQTPF 247
Query: 537 GSMSSYSSKLYG--GLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS 594
S+ + G T E+ +P + +G +IG+ G+ + IR++SGA I+++++
Sbjct: 248 TSLGQTTPAFPGVDASSQASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAME 307
Query: 595 SRGDRVALISGTPEQKRAAENLIQA 619
DR I+GTP A+ LI A
Sbjct: 308 GSSDRQITITGTPANISLAQYLINA 332
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 90/363 (24%), Positives = 149/363 (41%), Gaps = 84/363 (23%)
Query: 28 KDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIY 87
+ E G ++ R+L +GS+IGK G+ + +R+E+ AR+ V + +R+VTI
Sbjct: 7 QSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESSARINVSE--GNCPERIVTI- 63
Query: 88 SHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIA-----NAVANATDNDKKRKEKEEC 142
DA+ K A IA + + + +++ K
Sbjct: 64 ---------------------TGPTDAIFKAFAMIAYKFEEDIINSMSNSQATSKPPVTL 102
Query: 143 QILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESE 202
+++VP+SQ ++IGK G+ IK +R T ++V T + V ISG E
Sbjct: 103 RLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVAGDMLPNST-------ERAVTISGTPE 155
Query: 203 AVKKALFAISAIMYKFSPR-EDIPLETTVREAPPSIIIPSDVPIYPPGG----------L 251
A+ + + I +M + P+ IP P+ P+ GG
Sbjct: 156 AIIQCVKQICVVMLESPPKGATIPYRPK----------PATAPVIFSGGQVRADTLTAPA 205
Query: 252 YPNADPILPSRSVP--SILGAARV--PDLQG----------YADTGNTWPVYSTGLSLVS 297
N +L + +P +I G + PDL + G T P +
Sbjct: 206 TANLSLLLQHQPLPAYTIQGQYAIPHPDLTKLHQLAMQQTPFTSLGQTTPAF-------P 258
Query: 298 GLVGASQ--SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVI 355
G+ +SQ + EL I P + IG +IG+ G I IRQ SGAQI + + + + I
Sbjct: 259 GVDASSQASTHELTI----PNDLIGCIIGRQGTKINEIRQMSGAQIKIANAMEGSSDRQI 314
Query: 356 TVT 358
T+T
Sbjct: 315 TIT 317
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+TIRLL+ K +G IIGK G + ++R+ + A + +S+G+ P + +V + G
Sbjct: 15 TLTIRLLMHGKEVGSIIGKKGETVKKMREESSARINVSEGNCP------ERIVTITGPTD 68
Query: 448 SVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
++ A I + +D ++ + + PPV
Sbjct: 69 AIFKAFAMIAYKFEEDIINSMSNSQATSKPPV 100
>gi|218193355|gb|EEC75782.1| hypothetical protein OsI_12699 [Oryza sativa Indica Group]
Length = 510
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 115/220 (52%), Gaps = 30/220 (13%)
Query: 8 YRSQRDNDRDG--KNQKRRINEKDEK--GNEESVIYRILCPDGVIGSVIGKSGKVINSIR 63
Y+ + DN +G K Q E D+K G ++RIL P +G++IG+ G+ I +
Sbjct: 75 YQEELDNAYNGEVKQQDSLPVEADKKWPGWPGESVFRILIPAQKVGAIIGRKGEFIKKMC 134
Query: 64 QETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIA 123
+E++AR+K++D PG +R V I KD+ D P+ A D L +V+ I
Sbjct: 135 EESKARIKILDGPPGVPERTVMI--SAKDEPDA----------PISPAMDGLFRVYKRI- 181
Query: 124 NAVANATDNDKKRKEKE-----ECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPK 178
+ +D D + E+ ++LVP+SQ+ ++IGK GATIK ++ +++ +++
Sbjct: 182 ---TDGSDGDSGQPERNISNVGPTRLLVPASQAGSLIGKQGATIKSIQDSSKSIVRIV-- 236
Query: 179 DASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKF 218
E A+ D V I GE V+KAL +I++ + KF
Sbjct: 237 ---ETLPLVALNDDRVVEIQGEPVGVQKALESIASHLRKF 273
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 82/166 (49%), Gaps = 12/166 (7%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
E V R+L P K+G +IG+ G IK + + S A+I + D E + ++A + PD
Sbjct: 107 ESVFRILIPAQKVGAIIGRKGEFIKKMCEESKARIKILDGPPGVPERTVMISAKDEPDAP 166
Query: 367 KSMAVEAVLLLQTKINDEDD-----------DTVTIRLLVSSKVIGCIIGKSGSIINEIR 415
S A++ + + +I D D + RLLV + G +IGK G+ I I+
Sbjct: 167 ISPAMDGLFRVYKRITDGSDGDSGQPERNISNVGPTRLLVPASQAGSLIGKQGATIKSIQ 226
Query: 416 KRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLR 461
+K+ VRI + P A +D +VE+ GE V+ AL I LR
Sbjct: 227 DSSKSIVRIVE-TLPLVALNDDRVVEIQGEPVGVQKALESIASHLR 271
>gi|326505208|dbj|BAK02991.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 513
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 152/355 (42%), Gaps = 59/355 (16%)
Query: 309 VIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKS 368
V R+L P K+G +IG+ G IK + + S A+I + D E + ++A + PD+ S
Sbjct: 115 VFRILVPAQKVGAIIGRKGEFIKKMCEQSKARIKILDGPPGVTERAVIISAKDEPDEPIS 174
Query: 369 MAVEAVLLLQTKINDEDD-----------DTVTIRLLVSSKVIGCIIGKSGSIINEIRKR 417
A++ +L + +I D D + RLLV + G +IGK G+ I I+
Sbjct: 175 PAMDGLLRIHKRITDGSDGEFGQPQRGASNVGPTRLLVPASQAGSLIGKQGATIKSIQDS 234
Query: 418 TKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQI------------ILRLRDDAL 465
+K+ VRI + + P A +D +VE+ GE V A+ I +L L + +
Sbjct: 235 SKSVVRIVE-NVPPVALNDDRVVEIQGEPLGVHKAVELIANHLRKFLVDHSVLPLFEQQM 293
Query: 466 KDRDGSRNPPVGADHIYSSGTGISM--------------PPLLPSIPPVGPLGYDQRADS 511
K R P+ A ++ P +P P Y R D
Sbjct: 294 KMHSVQREQPMTAPQHWTPTQPWLPPPNLPPVGPGYGGNPQFMPPRPQD---NYYPRPD- 349
Query: 512 GSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTL-----EVLVPANAVG 566
+ + YG + P G+ G PPL + + +P +
Sbjct: 350 ---VPPMEKQPHYGISAYGREAPPSGT---------SGNQPPLHVASQVHNMQIPLSYAD 397
Query: 567 KVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFI 621
VIG AG++++ IR+ SGA + + +S+ + G+ I G+ Q + A+ LIQ F+
Sbjct: 398 AVIGAAGASISYIRRQSGAAVTIQESRGAPGEMTVEIIGSASQVQTAQQLIQNFM 452
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 89/357 (24%), Positives = 157/357 (43%), Gaps = 74/357 (20%)
Query: 38 IYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVE 97
++RIL P +G++IG+ G+ I + ++++AR+K++D PG +R V I + KD+ D
Sbjct: 115 VFRILVPAQKVGAIIGRKGEFIKKMCEQSKARIKILDGPPGVTERAVIISA--KDEPD-- 170
Query: 98 VDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEK-----EECQILVPSSQSA 152
EP+ A D LL++H I + +D + + ++ ++LVP+SQ+
Sbjct: 171 --------EPISPAMDGLLRIHKRI----TDGSDGEFGQPQRGASNVGPTRLLVPASQAG 218
Query: 153 NIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAIS 212
++IGK GATIK ++ +++ +++ E A+ D V I GE V KA+ I+
Sbjct: 219 SLIGKQGATIKSIQDSSKSVVRIV-----ENVPPVALNDDRVVEIQGEPLGVHKAVELIA 273
Query: 213 AIMYKF------SP--REDIPLETTVREAP---PSIIIPSD------------------- 242
+ KF P + + + + RE P P P+
Sbjct: 274 NHLRKFLVDHSVLPLFEQQMKMHSVQREQPMTAPQHWTPTQPWLPPPNLPPVGPGYGGNP 333
Query: 243 --VPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLV 300
+P P YP D + P P +A + +GN P++
Sbjct: 334 QFMPPRPQDNYYPRPD-VPPMEKQPHYGISAYGREAPPSGTSGNQPPLHV---------- 382
Query: 301 GASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITV 357
ASQ + I P + VIG G +I IR+ SGA + + +++ E + +
Sbjct: 383 -ASQVHNMQI----PLSYADAVIGAAGASISYIRRQSGAAVTIQESRGAPGEMTVEI 434
>gi|169647179|gb|ACA61608.1| hypothetical protein AP1_E07.1 [Arabidopsis lyrata subsp. petraea]
Length = 532
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 147/338 (43%), Gaps = 77/338 (22%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVD--PFPGAKDRVVTIYSHVKD 92
ESV +R+LCP G++IGK G VI ++ T ++++V+D P P + V+ I K
Sbjct: 240 ESVHFRLLCPASRTGAIIGKGGSVIRHLQSVTGSKIRVIDDIPVPSEERVVLIIAPSGKK 299
Query: 93 KEDVEVDDEFN---------------------DKEPLCAAQDALLKVHAAIA---NAVAN 128
K+D V D N D+E +AQ ALL+V I +A +
Sbjct: 300 KDDSNVFDSENPSSEEPKQEKGSECAGTSGGDDEEAPSSAQMALLRVLERIVFGDDAASV 359
Query: 129 ATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCA 188
D K + + C+++V +Q ++ K G I+R+R + ++++ D P CA
Sbjct: 360 DGDGLDKGESESLCRMIVRGNQVDFLMSKGGKMIQRIREDSGAIVRISSTDQIPP---CA 416
Query: 189 MEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSI-IIPSDVPIYP 247
D + I+G+ +VKKAL I+ + + APP+ P P YP
Sbjct: 417 FPGDVVIQITGKFSSVKKALLLITNCLQE-------------SGAPPTWDECPFPQPGYP 463
Query: 248 PG----GLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGAS 303
P +P D P +P + P ++
Sbjct: 464 PDYHSMEYHPQWDH--PPNPMPEDVVPFNRPVVE-------------------------- 495
Query: 304 QSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQI 341
EE+ R+LCP +K+G +IGKGG +++++ SGA I
Sbjct: 496 --EEVSFRLLCPADKVGSLIGKGGAVVRALQNESGASI 531
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 108/252 (42%), Gaps = 58/252 (23%)
Query: 254 NADPILPSRSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVL 313
DP+ P V +I +++ LQ D+G + S A+ +E + R+L
Sbjct: 197 QGDPLSPYFFVLAIEVFSKL--LQSKFDSGRL-------MEFSSSKRPATAAESVHFRLL 247
Query: 314 CPFNKIGRVIGKGGGTIKSIRQASGAQIDV-DDTKDNRDECVITVTA------------- 359
CP ++ G +IGKGG I+ ++ +G++I V DD +E V+ + A
Sbjct: 248 CPASRTGAIIGKGGSVIRHLQSVTGSKIRVIDDIPVPSEERVVLIIAPSGKKKDDSNVFD 307
Query: 360 IESP---------------------DDIKSMAVEAVLLLQTKINDEDDDTVT-------- 390
E+P ++ S A A+L + +I DD
Sbjct: 308 SENPSSEEPKQEKGSECAGTSGGDDEEAPSSAQMALLRVLERIVFGDDAASVDGDGLDKG 367
Query: 391 -----IRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDK-PKCADANDELVEVVG 444
R++V + ++ K G +I IR+ + A VRIS D+ P CA D ++++ G
Sbjct: 368 ESESLCRMIVRGNQVDFLMSKGGKMIQRIREDSGAIVRISSTDQIPPCAFPGDVVIQITG 427
Query: 445 EVGSVRDALVQI 456
+ SV+ AL+ I
Sbjct: 428 KFSSVKKALLLI 439
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 27/38 (71%)
Query: 34 EESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVK 71
EE V +R+LCP +GS+IGK G V+ +++ E+ A +K
Sbjct: 495 EEEVSFRLLCPADKVGSLIGKGGAVVRALQNESGASIK 532
>gi|348518109|ref|XP_003446574.1| PREDICTED: poly(rC)-binding protein 3-like [Oreochromis niloticus]
Length = 349
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 153/324 (47%), Gaps = 20/324 (6%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDD-- 365
L IR+L ++G +IGK G T+K +R+ SGA+I++ + N E ++T+T P D
Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREDSGARINISE--GNCPERIVTITG---PTDAI 70
Query: 366 IKSMAVEAVLLLQTKINDEDDDT------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
K+ A+ A + IN + VT+RL+V + G +IGK GS I E+R+ T
Sbjct: 71 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTG 130
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGAD 479
A V+++ P ++ + V + G ++ + QI + L + K P +
Sbjct: 131 AQVQVAGDMLP---NSTERAVTISGAPEAIIQCVKQICVVLLESPPKGATIPYRPKPAST 187
Query: 480 HIYSSGTGISMPPLLPSIPPVGPLGYDQR--ADSGSGIGMLSSSSLYGYGSLSMGDSPYG 537
+ SG + PL S + L Q A + G + L L+M +P+
Sbjct: 188 PVIFSGGQVRADPLGASTANLSLLLQHQPLPAYTIQGQYAIPHPDLSKLHQLAMQQTPFT 247
Query: 538 SMSSYSSKLYG--GLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSS 595
+ + G T E+ +P + +G +IG+ G+ + IR++SGA I+++++
Sbjct: 248 PLGQTTPAFPGLDASNQASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAMEG 307
Query: 596 RGDRVALISGTPEQKRAAENLIQA 619
+R I+GTP A+ LI A
Sbjct: 308 SSERQITITGTPANISLAQYLINA 331
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 92/359 (25%), Positives = 151/359 (42%), Gaps = 71/359 (19%)
Query: 25 INEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVV 84
I + E G ++ R+L +GS+IGK G+ + +R+++ AR+ + + +R+V
Sbjct: 4 IKVQSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREDSGARINISE--GNCPERIV 61
Query: 85 TIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIA-----NAVANATDNDKKRKEK 139
TI DA+ K A IA + + + +++ K
Sbjct: 62 TI----------------------TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPP 99
Query: 140 EECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISG 199
+++VP+SQ ++IGK G+ IK +R T ++V T + V ISG
Sbjct: 100 VTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVAGDMLPNST-------ERAVTISG 152
Query: 200 ESEAVKKALFAISAIMYKFSPR-EDIPLETTVREAP---PSIIIPSDVPIYPPGGLYPNA 255
EA+ + + I ++ + P+ IP R P P I V P G N
Sbjct: 153 APEAIIQCVKQICVVLLESPPKGATIPY----RPKPASTPVIFSGGQVRADPLGASTANL 208
Query: 256 DPILPSRSVP--SILGAARV--PDLQG----------YADTGNTWPVYSTGLSLVSGLVG 301
+L + +P +I G + PDL + G T P + GL
Sbjct: 209 SLLLQHQPLPAYTIQGQYAIPHPDLSKLHQLAMQQTPFTPLGQTTPAF-------PGLDA 261
Query: 302 ASQ--SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
++Q + EL I P + IG +IG+ G I IRQ SGAQI + + + E IT+T
Sbjct: 262 SNQASTHELTI----PNDLIGCIIGRQGTKINEIRQMSGAQIKIANAMEGSSERQITIT 316
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+TIRLL+ K +G IIGK G + ++R+ + A + IS+G+ P + +V + G
Sbjct: 15 TLTIRLLMHGKEVGSIIGKKGETVKKMREDSGARINISEGNCP------ERIVTITGPTD 68
Query: 448 SVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
++ A I + +D ++ + + PPV
Sbjct: 69 AIFKAFAMIAYKFEEDIINSMSNSPATSKPPV 100
>gi|148907101|gb|ABR16694.1| unknown [Picea sitchensis]
Length = 490
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 157/348 (45%), Gaps = 43/348 (12%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
E V R+L P K+G +IG+ G +K + + + ++I + D E V+ V+A E PD
Sbjct: 49 ENVFRMLVPSQKVGGIIGRKGEFVKKMCEETRSRIKILDGLSGTPERVVMVSAKEEPDAT 108
Query: 367 KSMAVEAVLLLQTKINDEDDD-----------TVTIRLLVSSKVIGCIIGKSGSIINEIR 415
S A++ +L + +I + D+ T+T RLL++ G +IGK G+ I I+
Sbjct: 109 ISPAMDGILKVHKRIIEGIDEVGRTQQAAGGPTIT-RLLLAGIQSGSLIGKQGATIKSIQ 167
Query: 416 KRTKADVR-ISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNP 474
+ + + + D P CA A+D+++E+ GE +V AL ++ LR L DR
Sbjct: 168 ENSGVAAKVVGSEDIPYCALADDKVLEIQGEPANVHKALELVVSHLR-KFLVDRS----- 221
Query: 475 PVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRA---DSGSGIGMLS--------SSSL 523
+Y + + P ++Q + +SGSG G S +
Sbjct: 222 ---VLPMYEMNMSKTNQSQMEQNLSHQPWSHNQTSSLPNSGSGFGNNSKYTPTAPPHDNY 278
Query: 524 YGYGSLSMGDSPYGSMSSYSSKLYGG------LPPPLTLEV----LVPANAVGKVIGKAG 573
Y L + ++ Y GG P P+ +V +P + VIG G
Sbjct: 279 YAPSDLPPETHSHHGLNMYGRDPLGGHSVPNAAPAPVITQVSQRMQIPLSYADAVIGTNG 338
Query: 574 SNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFI 621
+N++ R+ SGA I + +++ G+ I GT Q + A+ LIQ F+
Sbjct: 339 ANISYCRRNSGAIITIEETRGVPGEMTVEIHGTASQVQTAQQLIQNFM 386
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 92/192 (47%), Gaps = 15/192 (7%)
Query: 27 EKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTI 86
EK G ++R+L P +G +IG+ G+ + + +ETR+R+K++D G +RVV +
Sbjct: 40 EKKWPGWPGENVFRMLVPSQKVGGIIGRKGEFVKKMCEETRSRIKILDGLSGTPERVVMV 99
Query: 87 YSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILV 146
K++ D + A D +LKVH I + + ++L+
Sbjct: 100 --SAKEEPDATI----------SPAMDGILKVHKRIIEGIDEVGRTQQAAGGPTITRLLL 147
Query: 147 PSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKK 206
QS ++IGK GATIK ++ + + KV SE CA+ D + I GE V K
Sbjct: 148 AGIQSGSLIGKQGATIKSIQENSGVAAKVV---GSEDIPYCALADDKVLEIQGEPANVHK 204
Query: 207 ALFAISAIMYKF 218
AL + + + KF
Sbjct: 205 ALELVVSHLRKF 216
>gi|344306639|ref|XP_003421993.1| PREDICTED: poly(rC)-binding protein 3 [Loxodonta africana]
Length = 396
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 95/339 (28%), Positives = 155/339 (45%), Gaps = 52/339 (15%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDD-- 365
L IR+L ++G +IGK G T+K +R+ SGA+I++ + N E ++T+T P D
Sbjct: 71 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG---PTDAI 125
Query: 366 IKSMAVEAVLLLQTKINDEDDDT------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
K+ A+ A + IN + VT+RL+V + G +IGK GS I EIR+ T
Sbjct: 126 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 185
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNP-PVGA 478
A V+++ GD ++ + V + G ++ + QI + + + K P P
Sbjct: 186 AQVQVA-GDM--LPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPAST 242
Query: 479 DHIYSSGTG--------ISMPPLLPSI-------PPVGPLGYDQRADSGSGIGMLSSSSL 523
I++ G I P L + P PLG A G + + SS
Sbjct: 243 PVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEA 302
Query: 524 YGYGSLSMGDSPYGSMSSYSSKLYGGL---PPPLTLEVLVPANAVGKVIGKAGSNLANIR 580
MG S GL PP T E+ +P + +G +IG+ G+ + IR
Sbjct: 303 QNL----MGQS-------------SGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIR 345
Query: 581 KISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQA 619
++SGA I+++++ +R I+G+P A+ LI A
Sbjct: 346 QMSGAQIKIANATEGSSERQITITGSPANISLAQYLINA 384
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 93/372 (25%), Positives = 158/372 (42%), Gaps = 58/372 (15%)
Query: 10 SQRDNDRDGKNQKRRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRAR 69
SQR G+ + +++E G ++ R+L +GS+IGK G+ + +R+E+ AR
Sbjct: 47 SQRPQPHFGRRMESKVSEG---GLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGAR 103
Query: 70 VKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIA-----N 124
+ + + +R+VTI DA+ K A IA +
Sbjct: 104 INISE--GNCPERIVTI----------------------TGPTDAIFKAFAMIAYKFEED 139
Query: 125 AVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPT 184
+ + +++ K +++VP+SQ ++IGK G+ IK +R T ++V T
Sbjct: 140 IINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNST 199
Query: 185 HSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPR-EDIPLETTVREAPPSIIIPSDV 243
+ V ISG +A+ + + I +M + P+ IP P +I +
Sbjct: 200 -------ERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTP---VIFAGG 249
Query: 244 PIYPPGGLYPNADPILPSRSVPSILGAARVPDL--QGYADTGNTWPVYSTG-----LSLV 296
Y G Y P ++ + P L A G P++S+ +
Sbjct: 250 QAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQS 309
Query: 297 SGLVGA--SQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECV 354
SGL + + + EL I P + IG +IG+ G I IRQ SGAQI + + + E
Sbjct: 310 SGLDASPPASTHELTI----PNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQ 365
Query: 355 ITVTAIESPDDI 366
IT+T SP +I
Sbjct: 366 ITITG--SPANI 375
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+TIRLL+ K +G IIGK G + ++R+ + A + IS+G+ P + +V + G
Sbjct: 70 TLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCP------ERIVTITGPTD 123
Query: 448 SVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
++ A I + +D ++ + + PPV
Sbjct: 124 AIFKAFAMIAYKFEEDIINSMSNSPATSKPPV 155
>gi|356573119|ref|XP_003554712.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Glycine max]
Length = 446
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 98/357 (27%), Positives = 158/357 (44%), Gaps = 34/357 (9%)
Query: 25 INEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVV 84
+ EK G ++R+L P +G +IG+ G+ I I +ETRARVK++D PG R V
Sbjct: 35 VAEKKWPGWPGESVFRMLVPAQKVGGIIGRKGEFIKKIVEETRARVKILDGPPGTVQRAV 94
Query: 85 TIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAV-ANATDNDKKRKEKEECQ 143
I +E P A D LL+VH I + + ++ T K +
Sbjct: 95 MI----------SAKEEPGSSVP--PAVDGLLRVHKRIIDGLESDFTHAPSGVAGKVSTK 142
Query: 144 ILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEA 203
+LVP+SQ+ ++IGK G T+K ++ + ++V +E A++ D V + G+
Sbjct: 143 LLVPASQAGSLIGKQGGTVKSIQEASNCIVRVL---GAEDLPIFALQDDRVVEVVGDPTG 199
Query: 204 VKKALFAISAIMYKF-SPREDIPL-ETTVREAPPSII--IPSDVPIYPPGGLYPNADP-- 257
V KAL I++ + KF R IP+ E ++ A +P PP GL PN
Sbjct: 200 VHKALELIASHLRKFLVDRGVIPIFEMNMQTANTHHAEHMPPHQSWGPPQGLPPNVGGGS 259
Query: 258 --------ILPSRSVPSILGAARVP---DLQGYADTGNTWPVYSTGLSLVSGLVGA-SQS 305
+ P R + S A +P D Q + S G+ S A S
Sbjct: 260 GFGPPSQYMPPPRQLDSYYPPAEMPPPVDRQPHQGISAYGRDASIGVHASSNTQSAPSIV 319
Query: 306 EELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIES 362
++ ++ P + VIG G +I IR+ASGA + + + + E + ++ S
Sbjct: 320 TQITQQMQIPLSYADAVIGTAGASISYIRRASGATVTIQEARGVPGEMTVEISGTAS 376
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 159/349 (45%), Gaps = 39/349 (11%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
E V R+L P K+G +IG+ G IK I + + A++ + D + + ++A E P
Sbjct: 46 ESVFRMLVPAQKVGGIIGRKGEFIKKIVEETRARVKILDGPPGTVQRAVMISAKEEPGSS 105
Query: 367 KSMAVEAVLLLQTKIND--EDDDT---------VTIRLLVSSKVIGCIIGKSGSIINEIR 415
AV+ +L + +I D E D T V+ +LLV + G +IGK G + I+
Sbjct: 106 VPPAVDGLLRVHKRIIDGLESDFTHAPSGVAGKVSTKLLVPASQAGSLIGKQGGTVKSIQ 165
Query: 416 KRTKADVRI-SKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDR------ 468
+ + VR+ D P A +D +VEVVG+ V AL I LR L DR
Sbjct: 166 EASNCIVRVLGAEDLPIFALQDDRVVEVVGDPTGVHKALELIASHLR-KFLVDRGVIPIF 224
Query: 469 --DGSRNPPVGADHI---YSSGTGISMPPLLPS----------IPPVGPL-GYDQRADSG 512
+ A+H+ S G +PP + +PP L Y A+
Sbjct: 225 EMNMQTANTHHAEHMPPHQSWGPPQGLPPNVGGGSGFGPPSQYMPPPRQLDSYYPPAEMP 284
Query: 513 SGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKA 572
+ + YG D+ G +S +++ + +T ++ +P + VIG A
Sbjct: 285 PPVDRQPHQGISAYGR----DASIGVHASSNTQSAPSIVTQITQQMQIPLSYADAVIGTA 340
Query: 573 GSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFI 621
G++++ IR+ SGAT+ + +++ G+ ISGT Q + A+ LIQ F+
Sbjct: 341 GASISYIRRASGATVTIQEARGVPGEMTVEISGTASQVQTAQQLIQNFM 389
>gi|170036665|ref|XP_001846183.1| igf2 mRNA binding protein [Culex quinquefasciatus]
gi|167879496|gb|EDS42879.1| igf2 mRNA binding protein [Culex quinquefasciatus]
Length = 520
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 144/318 (45%), Gaps = 43/318 (13%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSM 369
+R+L +G +IG+ G TI+ I Q S A++DV KDN +T +P++ S
Sbjct: 128 LRLLVASEMVGAIIGRQGSTIRQITQNSRARVDVHR-KDNVGSLEKAITIYGNPENCTSA 186
Query: 370 AVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDK 429
+ ++Q + N+ + + +++L + +IG IIGKSG+ I I + T + +S +
Sbjct: 187 CKRILEVMQQEANNTNKGEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITVSSIND 246
Query: 430 PKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSGTGIS 489
+ + ++ V G + ++ QI +LR D +
Sbjct: 247 INSFNL-ERIITVKGSIDNMSRGESQISAKLRQSYENDLQ-------------------A 286
Query: 490 MPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGG 549
+ P P + P+ + +G+G+G S +Y P S Y G
Sbjct: 287 LAPQSIMFPGLHPMA--MMSTAGNGMGFAGRSGMY----------PGSSYPMYQPPTAPG 334
Query: 550 LPP-----PLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS-----SRGDR 599
+PP T + +P NAVG +IG GS++ NI + SGA+++++ ++ + +R
Sbjct: 335 VPPGSSDVQETTYLYIPNNAVGAIIGTKGSHIRNIIRFSGASVKIAPLEADKPLEQQTER 394
Query: 600 VALISGTPEQKRAAENLI 617
I GTPE + A+ LI
Sbjct: 395 KVTIVGTPEAQWKAQYLI 412
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 104/427 (24%), Positives = 181/427 (42%), Gaps = 81/427 (18%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDP-FPGAKDRVVTIYSHVKDKEDVEV 98
R+L ++G++IG+ G I I Q +RARV V G+ ++ +TIY
Sbjct: 129 RLLVASEMVGAIIGRQGSTIRQITQNSRARVDVHRKDNVGSLEKAITIYG---------- 178
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEEC-QILVPSSQSANIIGK 157
+ E +A +L+V AN N K E C +IL ++ IIGK
Sbjct: 179 -----NPENCTSACKRILEVMQQEAN-------NTNK---GEICLKILAHNNLIGRIIGK 223
Query: 158 AGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYK 217
+G TIKR+ T T I V+ + + + + + G + + + ISA + +
Sbjct: 224 SGNTIKRIMQDTDTKITVSSINDIN-----SFNLERIITVKGSIDNMSRGESQISAKLRQ 278
Query: 218 FSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQ 277
+ L AP SI+ P GL+P A + S G
Sbjct: 279 SYENDLQAL------APQSIMFP---------GLHPMA--------MMSTAGNG-----M 310
Query: 278 GYADT-----GNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKS 332
G+A G+++P+Y + G+ S + + P N +G +IG G I++
Sbjct: 311 GFAGRSGMYPGSSYPMYQPPTA--PGVPPGSSDVQETTYLYIPNNAVGAIIGTKGSHIRN 368
Query: 333 IRQASGAQIDV---DDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKINDE----- 384
I + SGA + + + K + VT + +P+ +A L+ K+ +E
Sbjct: 369 IIRFSGASVKIAPLEADKPLEQQTERKVTIVGTPE----AQWKAQYLIFEKMREEGFVSG 424
Query: 385 -DDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVV 443
DD +T+ +LV S +G IIGK G + E+++ T + +++ + D + V ++
Sbjct: 425 TDDVRLTVEILVPSAQVGRIIGKGGQNVRELQRVTGSIIKLPEHTAATPVD-EETTVHII 483
Query: 444 GEVGSVR 450
G SV+
Sbjct: 484 GPFFSVQ 490
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 32/42 (76%)
Query: 554 LTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSS 595
LT+E+LVP+ VG++IGK G N+ +++++G+ I++ + ++
Sbjct: 430 LTVEILVPSAQVGRIIGKGGQNVRELQRVTGSIIKLPEHTAA 471
>gi|119629731|gb|EAX09326.1| poly(rC) binding protein 3, isoform CRA_d [Homo sapiens]
Length = 393
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 160/351 (45%), Gaps = 54/351 (15%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDD-- 365
L IR+L ++G +IGK G T+K +R+ SGA+I++ + N E ++T+T P D
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG---PTDAI 100
Query: 366 IKSMAVEAVLLLQTKINDEDDD------TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
K+ A+ A + IN + VT+RL+V + G +IGK GS I EIR+ T
Sbjct: 101 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 160
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGAD 479
A V+++ GD ++ + V + G ++ + QI + + + K P +
Sbjct: 161 AQVQVA-GD--MLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPAST 217
Query: 480 HIYSSGTGISMPPLLPSI---------PPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLS 530
+ +G + PL S PP+ A + G + L L+
Sbjct: 218 PVIFAGGQVRADPLAASTANLSLLLQHPPL-------PAYTIQGQYAIPHPDLTKLHQLA 270
Query: 531 MGDSPYGSM----------------SSYSSKLYG---GL---PPPLTLEVLVPANAVGKV 568
M +P+ + S + L G GL PP T E+ +P + +G +
Sbjct: 271 MQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCI 330
Query: 569 IGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQA 619
IG+ G+ + IR++SGA I+++++ +R I+GTP A+ LI A
Sbjct: 331 IGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINA 381
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 97/382 (25%), Positives = 154/382 (40%), Gaps = 92/382 (24%)
Query: 23 RRINEK-DEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKD 81
RR+ K E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +
Sbjct: 31 RRMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPE 88
Query: 82 RVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIA-----NAVANATDNDKKR 136
R+VTI DA+ K A IA + + + +++
Sbjct: 89 RIVTI----------------------TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATS 126
Query: 137 KEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVL 196
K +++VP+SQ ++IGK G+ IK +R T ++V T + V
Sbjct: 127 KPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNST-------ERAVT 179
Query: 197 ISGESEAVKKALFAISAIMYKFSPR-EDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNA 255
ISG +A+ + + I +M + P+ IP P+ P+ GG A
Sbjct: 180 ISGTPDAIIQCVKQICVVMLESPPKGATIPYRPK----------PASTPVIFAGGQV-RA 228
Query: 256 DPILPSRSVPSIL--------------GAARVPDLQG----------YADTGNTWPVY-S 290
DP+ S + S+L A PDL + G T P +
Sbjct: 229 DPLAASTANLSLLLQHPPLPAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPG 288
Query: 291 TGLSLVS-----GLVGAS---------QSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQA 336
L L S L+G S + EL I P + IG +IG+ G I IRQ
Sbjct: 289 EKLPLHSSEEAQNLMGQSSGLDASPPASTHELTI----PNDLIGCIIGRQGTKINEIRQM 344
Query: 337 SGAQIDVDDTKDNRDECVITVT 358
SGAQI + + + E IT+T
Sbjct: 345 SGAQIKIANATEGSSERQITIT 366
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+TIRLL+ K +G IIGK G + ++R+ + A + IS+G+ P + +V + G
Sbjct: 45 TLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCP------ERIVTITGPTD 98
Query: 448 SVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
++ A I + +D ++ + + PPV
Sbjct: 99 AIFKAFAMIAYKFEEDIINSMSNSPATSKPPV 130
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 40/66 (60%), Gaps = 3/66 (4%)
Query: 302 ASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDV-DDTKDNRDECVITVTAI 360
A+ + +R++ P ++ G +IGKGG IK IR+++GAQ+ V D N E +T++
Sbjct: 124 ATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISG- 182
Query: 361 ESPDDI 366
+PD I
Sbjct: 183 -TPDAI 187
>gi|332256670|ref|XP_003277439.1| PREDICTED: poly(rC)-binding protein 3 [Nomascus leucogenys]
Length = 393
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 160/351 (45%), Gaps = 54/351 (15%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDD-- 365
L IR+L ++G +IGK G T+K +R+ SGA+I++ + N E ++T+T P D
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG---PTDAI 100
Query: 366 IKSMAVEAVLLLQTKINDEDDD------TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
K+ A+ A + IN + VT+RL+V + G +IGK GS I EIR+ T
Sbjct: 101 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 160
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGAD 479
A V+++ GD ++ + V + G ++ + QI + + + K P +
Sbjct: 161 AQVQVA-GD--MLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPAST 217
Query: 480 HIYSSGTGISMPPLLPSI---------PPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLS 530
+ +G + PL S PP+ A + G + L L+
Sbjct: 218 PVIFAGGQVRADPLAASTANLSLLLQHPPL-------PAYTIQGQYAIPHPDLTKLHQLA 270
Query: 531 MGDSPYGSM----------------SSYSSKLYG---GL---PPPLTLEVLVPANAVGKV 568
M +P+ + S + L G GL PP T E+ +P + +G +
Sbjct: 271 MQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCI 330
Query: 569 IGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQA 619
IG+ G+ + IR++SGA I+++++ +R I+GTP A+ LI A
Sbjct: 331 IGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINA 381
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 97/382 (25%), Positives = 154/382 (40%), Gaps = 92/382 (24%)
Query: 23 RRINEK-DEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKD 81
RR+ K E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +
Sbjct: 31 RRMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPE 88
Query: 82 RVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIA-----NAVANATDNDKKR 136
R+VTI DA+ K A IA + + + +++
Sbjct: 89 RIVTI----------------------TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATS 126
Query: 137 KEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVL 196
K +++VP+SQ ++IGK G+ IK +R T ++V T + V
Sbjct: 127 KPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNST-------ERAVT 179
Query: 197 ISGESEAVKKALFAISAIMYKFSPR-EDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNA 255
ISG +A+ + + I +M + P+ IP P+ P+ GG A
Sbjct: 180 ISGTPDAIIQCVKQICVVMLESPPKGATIPYRPK----------PASTPVIFAGGQV-RA 228
Query: 256 DPILPSRSVPSIL--------------GAARVPDLQG----------YADTGNTWPVY-S 290
DP+ S + S+L A PDL + G T P +
Sbjct: 229 DPLAASTANLSLLLQHPPLPAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPG 288
Query: 291 TGLSLVS-----GLVGAS---------QSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQA 336
L L S L+G S + EL I P + IG +IG+ G I IRQ
Sbjct: 289 EKLPLHSSEEAQNLMGQSSGLDASPPASTHELTI----PNDLIGCIIGRQGTKINEIRQM 344
Query: 337 SGAQIDVDDTKDNRDECVITVT 358
SGAQI + + + E IT+T
Sbjct: 345 SGAQIKIANATEGSSERQITIT 366
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+TIRLL+ K +G IIGK G + ++R+ + A + IS+G+ P + +V + G
Sbjct: 45 TLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCP------ERIVTITGPTD 98
Query: 448 SVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
++ A I + +D ++ + + PPV
Sbjct: 99 AIFKAFAMIAYKFEEDIINSMSNSPATSKPPV 130
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 40/66 (60%), Gaps = 3/66 (4%)
Query: 302 ASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDV-DDTKDNRDECVITVTAI 360
A+ + +R++ P ++ G +IGKGG IK IR+++GAQ+ V D N E +T++
Sbjct: 124 ATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISG- 182
Query: 361 ESPDDI 366
+PD I
Sbjct: 183 -TPDAI 187
>gi|432110248|gb|ELK34019.1| Poly(rC)-binding protein 3 [Myotis davidii]
Length = 347
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 151/320 (47%), Gaps = 48/320 (15%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDD-- 365
L IR+L ++G +IGK G T+K +R+ SGA+I++ + N E ++T+T P D
Sbjct: 56 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG---PTDAI 110
Query: 366 IKSMAVEAVLLLQTKINDEDDD------TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
K+ A+ A + IN + VT+RL+V + G +IGK GS I EIR+ T
Sbjct: 111 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 170
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGAD 479
A V+++ P ++ + V + G DA++Q + ++ L+ +PP GA
Sbjct: 171 AQVQVAGDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLE------SPPKGAT 217
Query: 480 HIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSM 539
Y P S P + G + ++ G ++ D + +
Sbjct: 218 IPYR--------PKPASTPVIFAGG--------------QAYTIQGQYAIPHPDVSFHFV 255
Query: 540 SSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDR 599
S PP T E+ +P + +G +IG+ G+ + IR++SGA I+++++ +R
Sbjct: 256 CLPFSSCLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSER 315
Query: 600 VALISGTPEQKRAAENLIQA 619
I+GTP A+ LI A
Sbjct: 316 QITITGTPANISLAQYLINA 335
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 145/353 (41%), Gaps = 76/353 (21%)
Query: 23 RRINEK-DEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKD 81
R++ K E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +
Sbjct: 41 RKMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPE 98
Query: 82 RVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIA-----NAVANATDNDKKR 136
R+VTI DA+ K A IA + + + +++
Sbjct: 99 RIVTIT----------------------GPTDAIFKAFAMIAYKFEEDIINSMSNSPATS 136
Query: 137 KEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVL 196
K +++VP+SQ ++IGK G+ IK +R T ++V T + V
Sbjct: 137 KPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNST-------ERAVT 189
Query: 197 ISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNAD 256
ISG +A+ + + I +M E+PP + +P P
Sbjct: 190 ISGTPDAIIQCVKQICVVML---------------ESPPK---GATIPYRP--------- 222
Query: 257 PILPSRSVPSILGAARVPDLQG-YADTGNTWPVYSTGLSLVSGLVGA--SQSEELVIRVL 313
S P I + +QG YA + L S L + + + EL I
Sbjct: 223 ---KPASTPVIFAGGQAYTIQGQYAIPHPDVSFHFVCLPFSSCLDASPPASTHELTI--- 276
Query: 314 CPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
P + IG +IG+ G I IRQ SGAQI + + + E IT+T +P +I
Sbjct: 277 -PNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITG--TPANI 326
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+TIRLL+ K +G IIGK G + ++R+ + A + IS+G+ P + +V + G
Sbjct: 55 TLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCP------ERIVTITGPTD 108
Query: 448 SVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
++ A I + +D ++ + + PPV
Sbjct: 109 AIFKAFAMIAYKFEEDIINSMSNSPATSKPPV 140
Score = 38.5 bits (88), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 55/121 (45%), Gaps = 23/121 (19%)
Query: 517 MLSSSSLYGYGSLSMGDS--PYGSMSSYSSKLY-------------GGLPPPLTLEVLVP 561
++SS + + G S P G++ ++S L GGL LT+ +L+
Sbjct: 4 VISSCAFFFPGDTIWAPSILPLGTLGTFSHHLQTHFGRKMESKVSEGGLNVTLTIRLLMH 63
Query: 562 ANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFI 621
VG +IGK G + +R+ SGA I +S+ +R+ I+G + + +AF
Sbjct: 64 GKEVGSIIGKKGETVKKMREESGARINISEGNCP--ERIVTITG------PTDAIFKAFA 115
Query: 622 M 622
M
Sbjct: 116 M 116
>gi|390478281|ref|XP_002761548.2| PREDICTED: poly(rC)-binding protein 3 [Callithrix jacchus]
Length = 393
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 160/351 (45%), Gaps = 54/351 (15%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDD-- 365
L IR+L ++G +IGK G T+K +R+ SGA+I++ + N E ++T+T P D
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG---PTDAI 100
Query: 366 IKSMAVEAVLLLQTKINDEDDD------TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
K+ A+ A + IN + VT+RL+V + G +IGK GS I EIR+ T
Sbjct: 101 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 160
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGAD 479
A V+++ GD ++ + V + G ++ + QI + + + K P +
Sbjct: 161 AQVQVA-GD--MLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPAST 217
Query: 480 HIYSSGTGISMPPLLPSI---------PPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLS 530
+ +G + PL S PP+ A + G + L L+
Sbjct: 218 PVIFAGGQVRADPLAASTANLSLLLQHPPL-------PAYTIQGQYAIPHPDLTKLHQLA 270
Query: 531 MGDSPYGSM----------------SSYSSKLYG---GL---PPPLTLEVLVPANAVGKV 568
M +P+ + S + L G GL PP T E+ +P + +G +
Sbjct: 271 MQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCI 330
Query: 569 IGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQA 619
IG+ G+ + IR++SGA I+++++ +R I+GTP A+ LI A
Sbjct: 331 IGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINA 381
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 97/382 (25%), Positives = 154/382 (40%), Gaps = 92/382 (24%)
Query: 23 RRINEK-DEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKD 81
RR+ K E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +
Sbjct: 31 RRMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPE 88
Query: 82 RVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIA-----NAVANATDNDKKR 136
R+VTI DA+ K A IA + + + +++
Sbjct: 89 RIVTI----------------------TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATS 126
Query: 137 KEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVL 196
K +++VP+SQ ++IGK G+ IK +R T ++V T + V
Sbjct: 127 KPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNST-------ERAVT 179
Query: 197 ISGESEAVKKALFAISAIMYKFSPR-EDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNA 255
ISG +A+ + + I +M + P+ IP P+ P+ GG A
Sbjct: 180 ISGTPDAIIQCVKQICVVMLESPPKGATIPYRPK----------PASTPVIFAGGQV-RA 228
Query: 256 DPILPSRSVPSIL--------------GAARVPDLQG----------YADTGNTWPVY-S 290
DP+ S + S+L A PDL + G T P +
Sbjct: 229 DPLAASTANLSLLLQHPPLPAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPG 288
Query: 291 TGLSLVS-----GLVGAS---------QSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQA 336
L L S L+G S + EL I P + IG +IG+ G I IRQ
Sbjct: 289 EKLPLHSSEEAQNLMGQSSGLDASPPASTHELTI----PNDLIGCIIGRQGTKINEIRQM 344
Query: 337 SGAQIDVDDTKDNRDECVITVT 358
SGAQI + + + E IT+T
Sbjct: 345 SGAQIKIANATEGSSERQITIT 366
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+TIRLL+ K +G IIGK G + ++R+ + A + IS+G+ P + +V + G
Sbjct: 45 TLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCP------ERIVTITGPTD 98
Query: 448 SVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
++ A I + +D ++ + + PPV
Sbjct: 99 AIFKAFAMIAYKFEEDIINSMSNSPATSKPPV 130
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 40/66 (60%), Gaps = 3/66 (4%)
Query: 302 ASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDV-DDTKDNRDECVITVTAI 360
A+ + +R++ P ++ G +IGKGG IK IR+++GAQ+ V D N E +T++
Sbjct: 124 ATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISG- 182
Query: 361 ESPDDI 366
+PD I
Sbjct: 183 -TPDAI 187
>gi|15236094|ref|NP_194330.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|4538929|emb|CAB39665.1| putative nucleic acid binding protein [Arabidopsis thaliana]
gi|7269451|emb|CAB79455.1| putative nucleic acid binding protein [Arabidopsis thaliana]
gi|15810499|gb|AAL07137.1| putative nucleic acid binding protein [Arabidopsis thaliana]
gi|20466386|gb|AAM20510.1| putative nucleic acid binding protein [Arabidopsis thaliana]
gi|21280915|gb|AAM45112.1| putative nucleic acid binding protein [Arabidopsis thaliana]
gi|332659742|gb|AEE85142.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 495
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 103/348 (29%), Positives = 164/348 (47%), Gaps = 48/348 (13%)
Query: 309 VIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKS 368
V R++ P K+G +IG+ G IK + + + A+I V D N + ++ ++ E P+ S
Sbjct: 75 VFRMIVPVTKVGAIIGRKGDFIKKMCEETRARIKVLDGPVNTPDRIVLISGKEEPEAYMS 134
Query: 369 MAVEAVLLLQTKIN---DEDDDTV--------TIRLLVSSKVIGCIIGKSGSIINEIRKR 417
A++AVL + +++ D DDD V ++RLLV+S +IGK GS+I I +
Sbjct: 135 PAMDAVLRVFRRVSGLPDNDDDDVQNAGSVFSSVRLLVASTQAINLIGKQGSLIKSIVEN 194
Query: 418 TKADVRI-SKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLR-------------DD 463
+ A VRI S+ + P A ++ +V++ GE + AL I+ LR
Sbjct: 195 SGASVRILSEEETPFYAAQDERIVDLQGEALKILKALEAIVGHLRRFLVDHTVVPLFEKQ 254
Query: 464 ALKDRDGSRNPPVGAD-----HIYSSGTGISMPPLLPSIPPVGPLGYDQRADS---GSGI 515
L +R A+ H SS LL P+ L D R DS SG+
Sbjct: 255 YLARVSQTRQEEPLAESKSSLHTISSNLMEPDFSLLARREPLF-LERDSRVDSRVQPSGV 313
Query: 516 GMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSN 575
+ S + LS SP ++ SS ++ + +P + +IG G+N
Sbjct: 314 SIYSQDPV-----LSARHSP--GLARVSSAFVTQ----VSQTMQIPFSYAEDIIGVEGAN 362
Query: 576 LANIRKISGATIEMSDSKSSRGDRVAL-ISGTPEQKRAAENLIQAFIM 622
+A IR+ SGATI + +S D++ + I GT Q + AE LIQ FI+
Sbjct: 363 IAYIRRRSGATITIKESP--HPDQITVEIKGTTSQVQTAEQLIQEFII 408
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 144/325 (44%), Gaps = 36/325 (11%)
Query: 38 IYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVE 97
++R++ P +G++IG+ G I + +ETRAR+KV+D DR+V I KE+ E
Sbjct: 75 VFRMIVPVTKVGAIIGRKGDFIKKMCEETRARIKVLDGPVNTPDRIVLI----SGKEEPE 130
Query: 98 VDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKE-KEECQILVPSSQSANIIG 156
+ A DA+L+V ++ N D+ + ++LV S+Q+ N+IG
Sbjct: 131 AY--------MSPAMDAVLRVFRRVSGLPDNDDDDVQNAGSVFSSVRLLVASTQAINLIG 182
Query: 157 KAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMY 216
K G+ IK + + S+++ + E T A + + V + GE+ + KAL AI +
Sbjct: 183 KQGSLIKSIVENSGASVRIL---SEEETPFYAAQDERIVDLQGEALKILKALEAIVGHLR 239
Query: 217 KFSPRED-IPL--------------ETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPS 261
+F +PL E + E+ S+ S + P L +P+
Sbjct: 240 RFLVDHTVVPLFEKQYLARVSQTRQEEPLAESKSSLHTISSNLMEPDFSLLARREPLFLE 299
Query: 262 RSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGR 321
R + + + Y+ +S GL+ VS S+ + I PF+
Sbjct: 300 RD-SRVDSRVQPSGVSIYSQDPVLSARHSPGLARVSSAFVTQVSQTMQI----PFSYAED 354
Query: 322 VIGKGGGTIKSIRQASGAQIDVDDT 346
+IG G I IR+ SGA I + ++
Sbjct: 355 IIGVEGANIAYIRRRSGATITIKES 379
>gi|108709930|gb|ABF97725.1| KH domain containing protein, expressed [Oryza sativa Japonica
Group]
Length = 389
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 116/220 (52%), Gaps = 30/220 (13%)
Query: 8 YRSQRDNDRDG--KNQKRRINEKDEK--GNEESVIYRILCPDGVIGSVIGKSGKVINSIR 63
Y+ + DN +G K Q E D+K G ++RIL P +G++IG+ G+ I +
Sbjct: 75 YQEESDNAYNGEVKQQDSLPVEADKKWPGWPGESVFRILIPAQKVGAIIGRKGEFIKKMC 134
Query: 64 QETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIA 123
+E++AR+K++D PG +R V I + KD+ D P+ A D L +V+ I
Sbjct: 135 EESKARIKILDGPPGVPERTVMISA--KDEPDA----------PISPAMDGLFRVYKRI- 181
Query: 124 NAVANATDNDKKRKEKE-----ECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPK 178
+ +D D + E+ ++LVP+SQ+ ++IGK GATIK ++ +++ +++
Sbjct: 182 ---TDGSDGDSGQPERNISNVGPTRLLVPASQAGSLIGKQGATIKSIQDSSKSIVRIV-- 236
Query: 179 DASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKF 218
E A+ D V I GE V+KAL +I++ + KF
Sbjct: 237 ---ETLPLVALNDDRVVEIQGEPVGVQKALESIASHLRKF 273
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 82/166 (49%), Gaps = 12/166 (7%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
E V R+L P K+G +IG+ G IK + + S A+I + D E + ++A + PD
Sbjct: 107 ESVFRILIPAQKVGAIIGRKGEFIKKMCEESKARIKILDGPPGVPERTVMISAKDEPDAP 166
Query: 367 KSMAVEAVLLLQTKINDEDD-----------DTVTIRLLVSSKVIGCIIGKSGSIINEIR 415
S A++ + + +I D D + RLLV + G +IGK G+ I I+
Sbjct: 167 ISPAMDGLFRVYKRITDGSDGDSGQPERNISNVGPTRLLVPASQAGSLIGKQGATIKSIQ 226
Query: 416 KRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLR 461
+K+ VRI + P A +D +VE+ GE V+ AL I LR
Sbjct: 227 DSSKSIVRIVE-TLPLVALNDDRVVEIQGEPVGVQKALESIASHLR 271
>gi|355560220|gb|EHH16906.1| hypothetical protein EGK_13160 [Macaca mulatta]
Length = 361
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 160/351 (45%), Gaps = 54/351 (15%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDD-- 365
L IR+L ++G +IGK G T+K +R+ SGA+I++ + N E ++T+T P D
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG---PTDAI 68
Query: 366 IKSMAVEAVLLLQTKINDEDDD------TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
K+ A+ A + IN + VT+RL+V + G +IGK GS I EIR+ T
Sbjct: 69 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 128
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGAD 479
A V+++ GD ++ + V + G ++ + QI + + + K P +
Sbjct: 129 AQVQVA-GD--MLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPAST 185
Query: 480 HIYSSGTGISMPPLLPSI---------PPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLS 530
+ +G + PL S PP+ A + G + L L+
Sbjct: 186 PVIFAGGQVRADPLAASTANLSLLLQHPPL-------PAYTIQGQYAIPHPDLTKLHQLA 238
Query: 531 MGDSPYGSM----------------SSYSSKLYG---GL---PPPLTLEVLVPANAVGKV 568
M +P+ + S + L G GL PP T E+ +P + +G +
Sbjct: 239 MQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCI 298
Query: 569 IGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQA 619
IG+ G+ + IR++SGA I+++++ +R I+GTP A+ LI A
Sbjct: 299 IGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINA 349
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 94/375 (25%), Positives = 150/375 (40%), Gaps = 91/375 (24%)
Query: 29 DEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYS 88
E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R+VTI
Sbjct: 6 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTI-- 61
Query: 89 HVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIA-----NAVANATDNDKKRKEKEECQ 143
DA+ K A IA + + + +++ K +
Sbjct: 62 --------------------TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLR 101
Query: 144 ILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEA 203
++VP+SQ ++IGK G+ IK +R T ++V T + V ISG +A
Sbjct: 102 LVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNST-------ERAVTISGTPDA 154
Query: 204 VKKALFAISAIMYKFSPR-EDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSR 262
+ + + I +M + P+ IP P+ P+ GG ADP+ S
Sbjct: 155 IIQCVKQICVVMLESPPKGATIPYRPK----------PASTPVIFAGGQV-RADPLAAST 203
Query: 263 SVPSIL--------------GAARVPDLQG----------YADTGNTWPVY-STGLSLVS 297
+ S+L A PDL + G T P + L L S
Sbjct: 204 ANLSLLLQHPPLPAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHS 263
Query: 298 -----GLVGAS---------QSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDV 343
L+G S + EL I P + IG +IG+ G I IRQ SGAQI +
Sbjct: 264 SEEAQNLMGQSSGLDASPPASTHELTI----PNDLIGCIIGRQGTKINEIRQMSGAQIKI 319
Query: 344 DDTKDNRDECVITVT 358
+ + E IT+T
Sbjct: 320 ANATEGSSERQITIT 334
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+TIRLL+ K +G IIGK G + ++R+ + A + IS+G+ P + +V + G
Sbjct: 13 TLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCP------ERIVTITGPTD 66
Query: 448 SVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
++ A I + +D ++ + + PPV
Sbjct: 67 AIFKAFAMIAYKFEEDIINSMSNSPATSKPPV 98
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 40/66 (60%), Gaps = 3/66 (4%)
Query: 302 ASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDV-DDTKDNRDECVITVTAI 360
A+ + +R++ P ++ G +IGKGG IK IR+++GAQ+ V D N E +T++
Sbjct: 92 ATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISG- 150
Query: 361 ESPDDI 366
+PD I
Sbjct: 151 -TPDAI 155
>gi|157114471|ref|XP_001652287.1| igf2 mRNA binding protein, putative [Aedes aegypti]
gi|108877277|gb|EAT41502.1| AAEL006876-PA [Aedes aegypti]
Length = 541
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 143/318 (44%), Gaps = 43/318 (13%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSM 369
+R+L +G +IG+ G TI+ I Q S A++DV KDN +T +P++ S
Sbjct: 129 LRLLVASEMVGAIIGRQGSTIRQITQNSRARVDVHR-KDNVGSLEKAITIYGNPENCTSA 187
Query: 370 AVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDK 429
+ ++Q + N+ + + +++L + +IG IIGKSG+ I I + T + +S +
Sbjct: 188 CKRILEVMQQEANNTNKGEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITVSSIND 247
Query: 430 PKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSGTGIS 489
+ + ++ V G + ++ QI +LR D +
Sbjct: 248 INSFNL-ERIITVKGSIDNMSRGESQISAKLRQSYENDLQ-------------------A 287
Query: 490 MPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGG 549
+ P P + P+ + +G+G+G + +Y P S Y G
Sbjct: 288 LAPQSIMFPGLHPMAM--MSTAGNGMGFTGRTGMY----------PGTSYPMYQPPTVPG 335
Query: 550 LPP-----PLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS-----SRGDR 599
PP T + +P NAVG +IG GS++ NI + SGA+++++ ++ + +R
Sbjct: 336 APPGSSDVQETTYLYIPNNAVGAIIGTKGSHIRNIIRFSGASVKIAPLEADKPLEQQTER 395
Query: 600 VALISGTPEQKRAAENLI 617
I GTPE + A+ LI
Sbjct: 396 KVTIVGTPEAQWKAQYLI 413
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 103/428 (24%), Positives = 176/428 (41%), Gaps = 71/428 (16%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDP-FPGAKDRVVTIYSHVKDKEDVEV 98
R+L ++G++IG+ G I I Q +RARV V G+ ++ +TIY
Sbjct: 130 RLLVASEMVGAIIGRQGSTIRQITQNSRARVDVHRKDNVGSLEKAITIYG---------- 179
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEEC-QILVPSSQSANIIGK 157
+ E +A +L+V AN + E C +IL ++ IIGK
Sbjct: 180 -----NPENCTSACKRILEVMQQEANNT----------NKGEICLKILAHNNLIGRIIGK 224
Query: 158 AGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYK 217
+G TIKR+ T T I V S + + + + G + + + ISA + +
Sbjct: 225 SGNTIKRIMQDTDTKITV-----SSINDINSFNLERIITVKGSIDNMSRGESQISAKLRQ 279
Query: 218 FSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQ 277
+ L AP SI+ P GL+P A + P
Sbjct: 280 SYENDLQAL------APQSIMFP---------GLHPMAMMSTAGNGMGFTGRTGMYP--- 321
Query: 278 GYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQAS 337
G ++P+Y V G S + + P N +G +IG G I++I + S
Sbjct: 322 -----GTSYPMYQP--PTVPGAPPGSSDVQETTYLYIPNNAVGAIIGTKGSHIRNIIRFS 374
Query: 338 GAQIDV---DDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKINDE------DDDT 388
GA + + + K + VT + +P+ +A L+ K+ +E DD
Sbjct: 375 GASVKIAPLEADKPLEQQTERKVTIVGTPE----AQWKAQYLIFEKMREEGFVSGTDDVR 430
Query: 389 VTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGS 448
+T+ +LV S +G IIGK G + E+++ T + +++ + D + V ++G S
Sbjct: 431 LTVEILVPSAQVGRIIGKGGQNVRELQRVTGSIIKLPEHTTNTPVD-EETTVHIIGPFFS 489
Query: 449 VRDALVQI 456
V+ A +I
Sbjct: 490 VQSAQRRI 497
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 32/42 (76%)
Query: 554 LTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSS 595
LT+E+LVP+ VG++IGK G N+ +++++G+ I++ + ++
Sbjct: 431 LTVEILVPSAQVGRIIGKGGQNVRELQRVTGSIIKLPEHTTN 472
>gi|4314357|gb|AAD15568.1| putative RNA-binding protein [Arabidopsis thaliana]
Length = 649
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 111/450 (24%), Positives = 191/450 (42%), Gaps = 58/450 (12%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVD 99
R++C VIG +IG +G V++ +R+ET ++ P G+ VV I + + +
Sbjct: 28 RVVCHASVIGGIIGSNGYVVSKLRRETGTKIHCESPVNGSDHWVVFIVGSTAVNQSILLT 87
Query: 100 D---EFNDKE-------PLCAAQDALLKV--HAAIANAVANATDNDKKRKEKEECQILVP 147
D EF+ E + AAQ AL++V + + A + E+ C IL
Sbjct: 88 DRVGEFSGGEHEDWVTCEVSAAQTALIRVLERSWVVLAAKDGGGVVDGEDEEAYCGILAD 147
Query: 148 SSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKA 207
+Q ++G G ++ +R + I+V P C + D + I+G+ AVKKA
Sbjct: 148 RNQIGAVLGLGGKNVEWMRRNSGAMIRVLPPPI------CGTKNDELIQITGDVLAVKKA 201
Query: 208 LFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSI 267
L +S+ + +P + PP + I + G + DP
Sbjct: 202 LVMVSSYIQNNAP---------LNGYPPPLSIKGYESLSTDGN---SEDP---------- 239
Query: 268 LGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGG 327
+ P+L+ + + T V S G G S ++V +++ G +IGK G
Sbjct: 240 -HSEFFPNLRSSSLSNATEIVASNRHLPYDG--GNSTERKVVFKIIFTSVVAGGIIGKQG 296
Query: 328 GTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKINDEDDD 387
I++++ +GA I V E V+TV+A E+ + S A A+ L+ + + D +
Sbjct: 297 TIIRALQNETGASISVGAPLKVSGERVVTVSARENLESRYSHAQNALALVFARSVEIDVE 356
Query: 388 -----------TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKP-KCADA 435
V +LLV S G E T ADV IS G++ +
Sbjct: 357 KGLRPGLHNGAIVKTKLLVPSHFANSFNGNGN---REAIIATGADVHISVGNQVLEWISE 413
Query: 436 NDELVEVVGEVGSVRDALVQIILRLRDDAL 465
N+ ++E+ GE V+ AL + +LR++ L
Sbjct: 414 NEVVIEIKGEYSHVQKALTHVSSKLRENLL 443
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 81/362 (22%), Positives = 142/362 (39%), Gaps = 103/362 (28%)
Query: 306 EELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDD 365
+E IRV+C + IG +IG G + +R+ +G +I + + D V+ +
Sbjct: 23 DETAIRVVCHASVIGGIIGSNGYVVSKLRRETGTKIHCESPVNGSDHWVVFI-------- 74
Query: 366 IKSMAVEAVLLLQTKIND----EDDDTVT----------IRLLVSSKV------------ 399
+ S AV +LL ++ + E +D VT IR+L S V
Sbjct: 75 VGSTAVNQSILLTDRVGEFSGGEHEDWVTCEVSAAQTALIRVLERSWVVLAAKDGGGVVD 134
Query: 400 ----------------IGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVV 443
IG ++G G + +R+ + A +R+ P C NDEL+++
Sbjct: 135 GEDEEAYCGILADRNQIGAVLGLGGKNVEWMRRNSGAMIRVLP--PPICGTKNDELIQIT 192
Query: 444 GEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPL 503
G+V +V+ ALV + ++++A PL PP+
Sbjct: 193 GDVLAVKKALVMVSSYIQNNA---------------------------PLNGYPPPLSIK 225
Query: 504 GYDQRADSGSG-------IGMLSSSSLYGYGSLSMGDS--PYGSMSSYSSKLYGGLPPPL 554
GY+ + G+ L SSSL + + PY +S K +
Sbjct: 226 GYESLSTDGNSEDPHSEFFPNLRSSSLSNATEIVASNRHLPYDGGNSTERK--------V 277
Query: 555 TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAE 614
+++ + G +IGK G+ + ++ +GA+I + G+RV +S A E
Sbjct: 278 VFKIIFTSVVAGGIIGKQGTIIRALQNETGASISVGAPLKVSGERVVTVS-------ARE 330
Query: 615 NL 616
NL
Sbjct: 331 NL 332
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 45/68 (66%), Gaps = 2/68 (2%)
Query: 554 LTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAA 613
+TLE+ V +A+G + G+ G+ + N+++ISGA +++ D + + LISG PEQ R A
Sbjct: 581 ITLELAVEKDALGSLYGRDGTGVDNLQQISGANVDVKDPTGT--EATVLISGNPEQARTA 638
Query: 614 ENLIQAFI 621
+LI++ +
Sbjct: 639 MSLIESIL 646
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 57/119 (47%), Gaps = 17/119 (14%)
Query: 34 EESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTI------- 86
E V+++I+ V G +IGK G +I +++ ET A + V P + +RVVT+
Sbjct: 274 ERKVVFKIIFTSVVAGGIIGKQGTIIRALQNETGASISVGAPLKVSGERVVTVSARENLE 333
Query: 87 --YSHVKD------KEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRK 137
YSH ++ VE+D E + L A++K + + AN+ + + R+
Sbjct: 334 SRYSHAQNALALVFARSVEIDVEKGLRPGL--HNGAIVKTKLLVPSHFANSFNGNGNRE 390
>gi|260829253|ref|XP_002609576.1| hypothetical protein BRAFLDRAFT_87781 [Branchiostoma floridae]
gi|229294938|gb|EEN65586.1| hypothetical protein BRAFLDRAFT_87781 [Branchiostoma floridae]
Length = 408
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 95/341 (27%), Positives = 156/341 (45%), Gaps = 68/341 (19%)
Query: 301 GASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAI 360
G + S L IR++ +G +IGK G TIK R+ SGA+I++ D + E ++T+T
Sbjct: 13 GEAPSVTLTIRLIMQGKDVGSIIGKKGDTIKRFREESGARINISD--GSSPERIVTITG- 69
Query: 361 ESPDDIKSMAVEAVLLLQTKINDEDDDT----------VTIRLLVSSKVIGCIIGKSGSI 410
S ++I ++A ++ K ++ VT+RL+V + G +IGK GS
Sbjct: 70 -STENI----LKAFNMIGKKFEEDMKAAHVNSSVPVPPVTLRLIVPASQCGSLIGKGGSK 124
Query: 411 INEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDG 470
I EIR+ T A ++++ P ++ + V V G DA+ Q + + L+
Sbjct: 125 IKEIREVTGASIQVAGDMLP---NSTERAVTVSG----TPDAISQCVYHICCVMLE---- 173
Query: 471 SRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSG---SGIGMLSSSSLYGYG 527
+PP GA +IP Y R SG SG + + L
Sbjct: 174 --SPPKGA-----------------TIP------YKPRPASGTSTSGPVVFAGGQLTKLH 208
Query: 528 SLSMGDSPY----GSMSSYSSKLYG-------GLPPPLTLEVLVPANAVGKVIGKAGSNL 576
L++ +PY ++ + + +G G P T E+ +P +G +IGK G +
Sbjct: 209 QLALQQTPYITPGTTLPAALATQFGVQTASQPGNPSSQTHELTIPNELIGCIIGKGGCKI 268
Query: 577 ANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLI 617
IR+ SGATI+++ + DR I+GTPE A+ LI
Sbjct: 269 NEIRQCSGATIKIAGMQEGSTDRQVTITGTPESISMAQFLI 309
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 143/334 (42%), Gaps = 70/334 (20%)
Query: 48 IGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKD--KEDVEVDDEFNDK 105
+GS+IGK G I R+E+ AR+ + D + +R+VTI ++ K + +F
Sbjct: 31 VGSIIGKKGDTIKRFREESGARINISDG--SSPERIVTITGSTENILKAFNMIGKKF--- 85
Query: 106 EPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRL 165
++ + H + V T +++VP+SQ ++IGK G+ IK +
Sbjct: 86 ------EEDMKAAHVNSSVPVPPVT-----------LRLIVPASQCGSLIGKGGSKIKEI 128
Query: 166 RSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIP 225
R T SI+V T + V +SG +A+ + ++ I +M E P
Sbjct: 129 REVTGASIQVAGDMLPNST-------ERAVTVSGTPDAISQCVYHICCVML-----ESPP 176
Query: 226 LETTVREAP-PSIIIPSDVPIYPPGG-------LYPNADP-ILPSRSVPSILGAARVPDL 276
T+ P P+ + P+ GG L P I P ++P+ L A +
Sbjct: 177 KGATIPYKPRPASGTSTSGPVVFAGGQLTKLHQLALQQTPYITPGTTLPAAL--ATQFGV 234
Query: 277 QGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQA 336
Q + GN +SQ+ EL I P IG +IGKGG I IRQ
Sbjct: 235 QTASQPGNP----------------SSQTHELTI----PNELIGCIIGKGGCKINEIRQC 274
Query: 337 SGAQIDVDDTKDNRDECVITVTAIESPDDIKSMA 370
SGA I + ++ + +T+T +P+ I SMA
Sbjct: 275 SGATIKIAGMQEGSTDRQVTITG--TPESI-SMA 305
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 34/62 (54%)
Query: 25 INEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVV 84
+ + GN S + + P+ +IG +IGK G IN IRQ + A +K+ G+ DR V
Sbjct: 234 VQTASQPGNPSSQTHELTIPNELIGCIIGKGGCKINEIRQCSGATIKIAGMQEGSTDRQV 293
Query: 85 TI 86
TI
Sbjct: 294 TI 295
>gi|395851184|ref|XP_003798146.1| PREDICTED: poly(rC)-binding protein 3 [Otolemur garnettii]
Length = 361
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 160/351 (45%), Gaps = 54/351 (15%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDD-- 365
L IR+L ++G +IGK G T+K +R+ SGA+I++ + N E ++T+T P D
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG---PTDAI 68
Query: 366 IKSMAVEAVLLLQTKINDEDDD------TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
K+ A+ A + +N + VT+RL+V + G +IGK GS I EIR+ T
Sbjct: 69 FKAFAMIAYKFEEDIVNSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 128
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGAD 479
A V+++ GD ++ + V + G ++ + QI + + + K P +
Sbjct: 129 AQVQVA-GD--MLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPAST 185
Query: 480 HIYSSGTGISMPPLLPSI---------PPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLS 530
+ +G + PL S PP+ A + G + L L+
Sbjct: 186 PVIFAGGQVRADPLAASTANLSLLLQHPPL-------PAYTIQGQYAIPHPDLTKLHQLA 238
Query: 531 MGDSPYGSM----------------SSYSSKLYG---GL---PPPLTLEVLVPANAVGKV 568
M +P+ + S + L G GL PP T E+ +P + +G +
Sbjct: 239 MQQTPFPPLGQANPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCI 298
Query: 569 IGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQA 619
IG+ G+ + IR++SGA I+++++ +R I+GTP A+ LI A
Sbjct: 299 IGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINA 349
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 92/377 (24%), Positives = 151/377 (40%), Gaps = 95/377 (25%)
Query: 29 DEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYS 88
E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R+VTI
Sbjct: 6 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTI-- 61
Query: 89 HVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIA-----NAVANATDNDKKRKEKEECQ 143
DA+ K A IA + V + +++ K +
Sbjct: 62 --------------------TGPTDAIFKAFAMIAYKFEEDIVNSMSNSPATSKPPVTLR 101
Query: 144 ILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEA 203
++VP+SQ ++IGK G+ IK +R T ++V T + V ISG +A
Sbjct: 102 LVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNST-------ERAVTISGTPDA 154
Query: 204 VKKALFAISAIMYKFSPR-EDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSR 262
+ + + I +M + P+ IP P+ P+ GG ADP+ S
Sbjct: 155 IIQCVKQICVVMLESPPKGATIPYRPK----------PASTPVIFAGGQV-RADPLAAST 203
Query: 263 SVPSILGAARVPDLQGY----------------------------------ADTGNTWPV 288
+ S+L + P L Y A G P+
Sbjct: 204 ANLSLL--LQHPPLPAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQANPAFPGEKLPL 261
Query: 289 YSTG-----LSLVSGLVGA--SQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQI 341
+S+ + SGL + + + EL I P + IG +IG+ G I IRQ SGAQI
Sbjct: 262 HSSEEAQNLMGQSSGLDASPPASTHELTI----PNDLIGCIIGRQGTKINEIRQMSGAQI 317
Query: 342 DVDDTKDNRDECVITVT 358
+ + + E IT+T
Sbjct: 318 KIANATEGSSERQITIT 334
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+TIRLL+ K +G IIGK G + ++R+ + A + IS+G+ P + +V + G
Sbjct: 13 TLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCP------ERIVTITGPTD 66
Query: 448 SVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
++ A I + +D ++ + + PPV
Sbjct: 67 AIFKAFAMIAYKFEEDIVNSMSNSPATSKPPV 98
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 40/66 (60%), Gaps = 3/66 (4%)
Query: 302 ASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDV-DDTKDNRDECVITVTAI 360
A+ + +R++ P ++ G +IGKGG IK IR+++GAQ+ V D N E +T++
Sbjct: 92 ATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISG- 150
Query: 361 ESPDDI 366
+PD I
Sbjct: 151 -TPDAI 155
>gi|449493846|ref|XP_002188887.2| PREDICTED: poly(rC)-binding protein 3-like [Taeniopygia guttata]
Length = 352
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 149/326 (45%), Gaps = 20/326 (6%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
L IR+L ++G +IGK G T+K +R+ SGA+I++ + C + I P D
Sbjct: 17 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE-----GTCPERIVTITGPTDAI 71
Query: 368 SMAVEAVLL-LQTKINDEDDDT-------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
A + L + IN ++ VT+RL+V + G +IGK GS I EIR+ T
Sbjct: 72 FKAFSMIALKFEEDINASMTNSSVTSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 131
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGAD 479
A V+++ P ++ + V + G ++ + QI + + + K P +
Sbjct: 132 AQVQVAGDMLP---NSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASA 188
Query: 480 HIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGS--GIGMLSSSSLYGYGSLSMGDSPYG 537
I +G + +L S L Q A + + G + L L+M P+
Sbjct: 189 PIIFAGGQVRADTILASAGNHTVLAQPQPAPAFTIQGQYAIPHPDLTKLHQLAMQHPPFT 248
Query: 538 SMSSYSSKLYG--GLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSS 595
+ + G P + E+ +P + +G +IG+ GS + IR++SGA I+++++
Sbjct: 249 PLGQTTPGFPGLDATTPTSSHELTIPNDLIGCIIGRQGSKINEIRQMSGAQIKIANATEG 308
Query: 596 RGDRVALISGTPEQKRAAENLIQAFI 621
+R I+G+P A+ LI A I
Sbjct: 309 SAERQVTITGSPANISLAQYLINASI 334
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 97/378 (25%), Positives = 152/378 (40%), Gaps = 81/378 (21%)
Query: 14 NDRDGKNQKRRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV 73
N +DGK E G ++ R+L +GS+IGK G+ + +R+E+ AR+ +
Sbjct: 2 NTKDGK--------VSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINIS 53
Query: 74 DPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIA-----NAVAN 128
+ +R+VTI DA+ K + IA + A+
Sbjct: 54 EGT--CPERIVTI----------------------TGPTDAIFKAFSMIALKFEEDINAS 89
Query: 129 ATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCA 188
T++ K +++VP+SQ ++IGK G+ IK +R T ++V T
Sbjct: 90 MTNSSVTSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNST---- 145
Query: 189 MEFDNFVLISGESEAVKKALFAISAIMYKFSPR-EDIPLETTVREAPPSIIIPSDVPIYP 247
+ V ISG +A+ + + I +M + P+ IP P+ PI
Sbjct: 146 ---ERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPK----------PASAPIIF 192
Query: 248 PGGLYPNADPILPSRSVPSILG--------------AARVPDLQGYADTGNTWPVYSTGL 293
GG AD IL S ++L A PDL P ++
Sbjct: 193 AGGQV-RADTILASAGNHTVLAQPQPAPAFTIQGQYAIPHPDLTKLHQLAMQHPPFTPLG 251
Query: 294 SLVSGLVG-----ASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD 348
G G + S EL I P + IG +IG+ G I IRQ SGAQI + + +
Sbjct: 252 QTTPGFPGLDATTPTSSHELTI----PNDLIGCIIGRQGSKINEIRQMSGAQIKIANATE 307
Query: 349 NRDECVITVTAIESPDDI 366
E +T+T SP +I
Sbjct: 308 GSAERQVTITG--SPANI 323
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+TIRLL+ K +G IIGK G + ++R+ + A + IS+G P + +V + G
Sbjct: 16 TLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGTCP------ERIVTITGPTD 69
Query: 448 SVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
++ A I L+ +D ++ + + PPV
Sbjct: 70 AIFKAFSMIALKFEEDINASMTNSSVTSKPPV 101
>gi|56566054|gb|AAV98363.1| poly(rC) binding protein 3 [Homo sapiens]
Length = 361
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 100/361 (27%), Positives = 162/361 (44%), Gaps = 74/361 (20%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDD-- 365
L IR+L ++G +IGK G T+K +R+ SGA+I++ + N E ++T+T P D
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG---PTDAI 68
Query: 366 IKSMAVEAVLLLQTKINDEDDD------TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
K+ A+ A + IN + VT+RL+V + G +IGK GS I EIR+ T
Sbjct: 69 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 128
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNP----- 474
A V+++ GD ++ + V + G ++ + QI + + + K P
Sbjct: 129 AQVQVA-GD--MLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPAST 185
Query: 475 -------PVGADHIYSSGTGISM----PPLLP-------SIP---------------PVG 501
V AD + +S +S+ PPL +IP P+
Sbjct: 186 PVIFAGGQVRADPLAASTANLSLLLQHPPLPAYTIQGQYAIPHPDLTKLHQLAMQQTPLP 245
Query: 502 PLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGL---PPPLTLEV 558
PLG A G + + SS MG S GL PP T E+
Sbjct: 246 PLGQTNPAFPGEKLPLHSSEEAQNL----MGQS-------------SGLDASPPASTHEL 288
Query: 559 LVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQ 618
+P + +G +IG+ G+ + IR++SGA I+++++ +R I+GTP A+ LI
Sbjct: 289 TIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLIN 348
Query: 619 A 619
A
Sbjct: 349 A 349
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 91/377 (24%), Positives = 151/377 (40%), Gaps = 95/377 (25%)
Query: 29 DEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYS 88
E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R+VTI
Sbjct: 6 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTI-- 61
Query: 89 HVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIA-----NAVANATDNDKKRKEKEECQ 143
DA+ K A IA + + + +++ K +
Sbjct: 62 --------------------TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLR 101
Query: 144 ILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEA 203
++VP+SQ ++IGK G+ IK +R T ++V T + V ISG +A
Sbjct: 102 LVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNST-------ERAVTISGTPDA 154
Query: 204 VKKALFAISAIMYKFSPR-EDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSR 262
+ + + I +M + P+ IP P+ P+ GG ADP+ S
Sbjct: 155 IIQCVKQICVVMLESPPKGATIPYRPK----------PASTPVIFAGGQV-RADPLAAST 203
Query: 263 SVPSILGAARVPDLQGY----------------------------------ADTGNTWPV 288
+ S+L + P L Y A G P+
Sbjct: 204 ANLSLL--LQHPPLPAYTIQGQYAIPHPDLTKLHQLAMQQTPLPPLGQTNPAFPGEKLPL 261
Query: 289 YSTG-----LSLVSGLVGA--SQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQI 341
+S+ + SGL + + + EL I P + IG +IG+ G I IRQ SGAQI
Sbjct: 262 HSSEEAQNLMGQSSGLDASPPASTHELTI----PNDLIGCIIGRQGTKINEIRQMSGAQI 317
Query: 342 DVDDTKDNRDECVITVT 358
+ + + E IT+T
Sbjct: 318 KIANATEGSSERQITIT 334
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+TIRLL+ K +G IIGK G + ++R+ + A + IS+G+ P + +V + G
Sbjct: 13 TLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCP------ERIVTITGPTD 66
Query: 448 SVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
++ A I + +D ++ + + PPV
Sbjct: 67 AIFKAFAMIAYKFEEDIINSMSNSPATSKPPV 98
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 40/66 (60%), Gaps = 3/66 (4%)
Query: 302 ASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDV-DDTKDNRDECVITVTAI 360
A+ + +R++ P ++ G +IGKGG IK IR+++GAQ+ V D N E +T++
Sbjct: 92 ATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISG- 150
Query: 361 ESPDDI 366
+PD I
Sbjct: 151 -TPDAI 155
>gi|426218401|ref|XP_004003435.1| PREDICTED: poly(rC)-binding protein 3 isoform 4 [Ovis aries]
Length = 332
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 152/335 (45%), Gaps = 51/335 (15%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDD-- 365
L IR+L ++G +IGK G T+K +R+ SGA+I++ + N E ++T+T P D
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG---PTDAI 68
Query: 366 IKSMAVEAVLLLQTKINDEDDD------TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
K+ A+ A + IN + VT+RL+V + G +IGK GS I EIR+ T
Sbjct: 69 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 128
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNP-PVGA 478
A V+++ P ++ + V + G ++ + QI + + + K P P
Sbjct: 129 AQVQVAGDMLP---NSTERAVTISGTPDAIIQCVKQICVVMLESPRKGVTVVVAPKPAST 185
Query: 479 DHIYSSGTGIS--------------MPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLY 524
I++ G + + L P PLG A G+
Sbjct: 186 PVIFAGGQAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPGTD---------- 235
Query: 525 GYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISG 584
++ SP+ + + PP T E+ +P + +G +IG+ G+ + IR++SG
Sbjct: 236 --RAVPFVRSPWACLDAS--------PPASTHELTIPNDLIGCIIGRQGTKINEIRQMSG 285
Query: 585 ATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQA 619
A I+++++ +R I+GTP A+ LI A
Sbjct: 286 AQIKIANATEGSSERQITITGTPANISLAQYLINA 320
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 92/363 (25%), Positives = 151/363 (41%), Gaps = 82/363 (22%)
Query: 29 DEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYS 88
E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R+VTI
Sbjct: 6 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTIT- 62
Query: 89 HVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIA-----NAVANATDNDKKRKEKEECQ 143
DA+ K A IA + + + +++ K +
Sbjct: 63 ---------------------GPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLR 101
Query: 144 ILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEA 203
++VP+SQ ++IGK G+ IK +R T ++V T + V ISG +A
Sbjct: 102 LVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNST-------ERAVTISGTPDA 154
Query: 204 VKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRS 263
+ + + I +M + SPR+ + TV AP P+ P+ GG A I +
Sbjct: 155 IIQCVKQICVVMLE-SPRKGV----TVVVAPK----PASTPVIFAGG---QAYTIQGQYA 202
Query: 264 VPSILGAARVPDLQG----------YADTGNTWPVYSTGLSLVSGLVGA----------S 303
+P PDL + G T P + G V + +
Sbjct: 203 IPH-------PDLTKLHQLAMQQTPFPPLGQTNPAFP-GTDRAVPFVRSPWACLDASPPA 254
Query: 304 QSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESP 363
+ EL I P + IG +IG+ G I IRQ SGAQI + + + E IT+T +P
Sbjct: 255 STHELTI----PNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITG--TP 308
Query: 364 DDI 366
+I
Sbjct: 309 ANI 311
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+TIRLL+ K +G IIGK G + ++R+ + A + IS+G+ P + +V + G
Sbjct: 13 TLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCP------ERIVTITGPTD 66
Query: 448 SVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
++ A I + +D ++ + + PPV
Sbjct: 67 AIFKAFAMIAYKFEEDIINSMSNSPATSKPPV 98
>gi|307189125|gb|EFN73581.1| Insulin-like growth factor 2 mRNA-binding protein 1 [Camponotus
floridanus]
Length = 587
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 152/333 (45%), Gaps = 45/333 (13%)
Query: 296 VSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVI 355
SGL G+ + + +R+L + +G +IG+ G TI+ I Q S A++DV KDN
Sbjct: 135 FSGLPGSGRQTDFPLRILVQSDMVGAIIGRQGSTIRQITQVSRARVDVHR-KDNVGSLEK 193
Query: 356 TVTAIESPDDIKSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIR 415
+T +P++ + + + ++Q + + +T+++L + +IG IIGK G+ I I
Sbjct: 194 AITIYGNPENCTNACKKILDVMQQEAASTNKGEITLKILAHNNLIGRIIGKGGNTIKRIM 253
Query: 416 KRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPP 475
+ T + + +S + + + ++ V G + ++ A I +LR D
Sbjct: 254 QDTDSKITVSSINDINSFNL-ERIITVKGTIENMSKAESMISSKLRQSYENDLQ------ 306
Query: 476 VGADHIYSSGTGISMPP---LLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMG 532
+M P + P + P+ + S G G+ YGS G
Sbjct: 307 -------------AMAPQSMMFPGLHPMAMMSTAGMGYSSRGPGL--------YGS---G 342
Query: 533 DSPYGSMSSYSSKLYGGLPPPLTLE---VLVPANAVGKVIGKAGSNLANIRKISGATI-- 587
+PY SS ++ G+P T E + +P N+VG +IG GS++ NI + SGA++
Sbjct: 343 PAPYPYQSSLPTQQ--GVPASDTQETTFLYIPNNSVGAIIGTKGSHIRNIIRFSGASVKI 400
Query: 588 ---EMSDSKSSRGDRVALISGTPEQKRAAENLI 617
E + +R I G+PE + A+ LI
Sbjct: 401 APLEQDKPAEQQTERKVTIIGSPESQWKAQYLI 433
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 109/423 (25%), Positives = 184/423 (43%), Gaps = 68/423 (16%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDP-FPGAKDRVVTIYSHVKDKEDVEV 98
RIL ++G++IG+ G I I Q +RARV V G+ ++ +TIY + ++ +
Sbjct: 150 RILVQSDMVGAIIGRQGSTIRQITQVSRARVDVHRKDNVGSLEKAITIYGNPENCTNA-- 207
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
C +++ AA N K + +IL ++ IIGK
Sbjct: 208 ----------CKKILDVMQQEAASTN------------KGEITLKILAHNNLIGRIIGKG 245
Query: 159 GATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKF 218
G TIKR+ T + I V S + + + + G E + KA IS+ + +
Sbjct: 246 GNTIKRIMQDTDSKITV-----SSINDINSFNLERIITVKGTIENMSKAESMISSKLRQ- 299
Query: 219 SPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQG 278
S D+ AP S++ P GL+P A S + ++R P L
Sbjct: 300 SYENDLQAM-----APQSMMFP---------GLHPMA-----MMSTAGMGYSSRGPGL-- 338
Query: 279 YADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASG 338
Y +P Y + L G V AS ++E + P N +G +IG G I++I + SG
Sbjct: 339 YGSGPAPYP-YQSSLPTQQG-VPASDTQETTF-LYIPNNSVGAIIGTKGSHIRNIIRFSG 395
Query: 339 AQIDV---DDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKINDE------DDDTV 389
A + + + K + VT I SP+ +A L+ K+ +E +D +
Sbjct: 396 ASVKIAPLEQDKPAEQQTERKVTIIGSPES----QWKAQYLIFEKMREEGYVAGTEDVRL 451
Query: 390 TIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSV 449
TI +LV S +G IIGK G + E+++ T + +++S+ + + V ++G SV
Sbjct: 452 TIEILVPSTQVGRIIGKGGQNVRELQRVTGSVIKLSEQQATPPSAEEETTVHIIGPFFSV 511
Query: 450 RDA 452
+ A
Sbjct: 512 QSA 514
Score = 45.8 bits (107), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 34/42 (80%)
Query: 554 LTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSS 595
LT+E+LVP+ VG++IGK G N+ +++++G+ I++S+ +++
Sbjct: 451 LTIEILVPSTQVGRIIGKGGQNVRELQRVTGSVIKLSEQQAT 492
>gi|338720838|ref|XP_001488421.3| PREDICTED: poly(rC)-binding protein 3 [Equus caballus]
Length = 393
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 92/344 (26%), Positives = 158/344 (45%), Gaps = 40/344 (11%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDD-- 365
L IR+L ++G +IGK G T+K +R+ SGA+I++ + N E ++T+T P D
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG---PTDAI 100
Query: 366 IKSMAVEAVLLLQTKINDEDDDT------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
K+ A+ A + IN + VT+RL+V + G +IGK GS I EIR+ T
Sbjct: 101 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 160
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGAD 479
A V+++ GD ++ + V + G ++ + QI + + + K P +
Sbjct: 161 AQVQVA-GDM--LPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPAST 217
Query: 480 HIYSSGTGISMPPLLPSIP--PVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYG 537
+ +G + PL S + A + G + L L+M +P+
Sbjct: 218 PVIFAGGQVRADPLAASTANLSLLLQPPPLPAYTIQGQYAIPHPELTKLHQLAMQQTPFP 277
Query: 538 SM----------------SSYSSKLYG---GL---PPPLTLEVLVPANAVGKVIGKAGSN 575
+ S + L G GL PP T E+ +P + +G +IG+ G+
Sbjct: 278 PLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTK 337
Query: 576 LANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQA 619
+ IR++SGA I+++++ +R I+GTP A+ LI A
Sbjct: 338 INEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINA 381
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 95/390 (24%), Positives = 157/390 (40%), Gaps = 94/390 (24%)
Query: 23 RRINEK-DEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKD 81
R++ K E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +
Sbjct: 31 RKMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPE 88
Query: 82 RVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIA-----NAVANATDNDKKR 136
R+VTI DA+ K A IA + + + +++
Sbjct: 89 RIVTI----------------------TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATS 126
Query: 137 KEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVL 196
K +++VP+SQ ++IGK G+ IK +R T ++V T + V
Sbjct: 127 KPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNST-------ERAVT 179
Query: 197 ISGESEAVKKALFAISAIMYKFSPR-EDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNA 255
ISG +A+ + + I +M + P+ IP P+ P+ GG A
Sbjct: 180 ISGTPDAIIQCVKQICVVMLESPPKGATIPYRPK----------PASTPVIFAGGQV-RA 228
Query: 256 DPILPSRS------------VPSILGAARVPDLQ------------GYADTGNTWPVY-S 290
DP+ S + +I G +P + + G T P +
Sbjct: 229 DPLAASTANLSLLLQPPPLPAYTIQGQYAIPHPELTKLHQLAMQQTPFPPLGQTNPAFPG 288
Query: 291 TGLSLVS-----GLVGAS---------QSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQA 336
L L S L+G S + EL I P + IG +IG+ G I IRQ
Sbjct: 289 EKLPLHSSEEAQNLMGQSSGLDASPPASTHELTI----PNDLIGCIIGRQGTKINEIRQM 344
Query: 337 SGAQIDVDDTKDNRDECVITVTAIESPDDI 366
SGAQI + + + E IT+T +P +I
Sbjct: 345 SGAQIKIANATEGSSERQITITG--TPANI 372
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+TIRLL+ K +G IIGK G + ++R+ + A + IS+G+ P + +V + G
Sbjct: 45 TLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCP------ERIVTITGPTD 98
Query: 448 SVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
++ A I + +D ++ + + PPV
Sbjct: 99 AIFKAFAMIAYKFEEDIINSMSNSPATSKPPV 130
Score = 39.3 bits (90), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 21/101 (20%)
Query: 535 PYGSMSSYSSKLY-------------GGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRK 581
P+G++S+ S L GGL LT+ +L+ VG +IGK G + +R+
Sbjct: 14 PHGTLSTLSHHLQPHFGRKMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMRE 73
Query: 582 ISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFIM 622
SGA I +S+ +R+ I+G + + +AF M
Sbjct: 74 ESGARINISEGNCP--ERIVTITG------PTDAIFKAFAM 106
>gi|326917277|ref|XP_003204927.1| PREDICTED: poly(rC)-binding protein 3-like [Meleagris gallopavo]
Length = 448
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 151/325 (46%), Gaps = 22/325 (6%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
L IR+L ++G +IGK G T+K +R+ SGA+I++ + C + I P D
Sbjct: 17 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE-----GSCPERIVTITGPTDAI 71
Query: 368 SMAVEAVLL-LQTKINDEDDDT-------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
A + L + IN ++ VT+RL+V + G +IGK GS I EIR+ T
Sbjct: 72 FKAFSMIALKFEEDINASMTNSSVTSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 131
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNP-PVGA 478
A V+++ GD ++ + V + G ++ + QI + + + K P P A
Sbjct: 132 AQVQVA-GDM--LPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASA 188
Query: 479 DHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGS--GIGMLSSSSLYGYGSLSMGDSPY 536
I++ G + +L S L Q A + + G + L L+M P+
Sbjct: 189 PIIFAGGQ-VRADTILASAGNHTVLAQPQPAPAFTIQGQYAIPHPDLTKLHQLAMQHPPF 247
Query: 537 GSMSSYSSKLYG--GLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS 594
+ + G P + E+ +P + +G +IG+ GS + IR++SGA I+++++
Sbjct: 248 TPLGQTTPGFPGLDATSPTSSHELTIPNDLIGCIIGRQGSKINEIRQMSGAQIKIANATE 307
Query: 595 SRGDRVALISGTPEQKRAAENLIQA 619
+R I+G+P A+ LI A
Sbjct: 308 GSAERQVTITGSPANISLAQYLINA 332
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 96/371 (25%), Positives = 152/371 (40%), Gaps = 77/371 (20%)
Query: 25 INEKDEKGNEE----SVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAK 80
+N KD K +E ++ R+L +GS+IGK G+ + +R+E+ AR+ + +
Sbjct: 1 MNPKDSKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--SCP 58
Query: 81 DRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIA-----NAVANATDNDKK 135
+R+VTI DA+ K + IA + A+ T++
Sbjct: 59 ERIVTI----------------------TGPTDAIFKAFSMIALKFEEDINASMTNSSVT 96
Query: 136 RKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFV 195
K +++VP+SQ ++IGK G+ IK +R T ++V T + V
Sbjct: 97 SKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNST-------ERAV 149
Query: 196 LISGESEAVKKALFAISAIMYKFSPR-EDIPLETTVREAPPSIIIPSDVPIYPPGGLYPN 254
ISG +A+ + + I +M + P+ IP P+ PI GG
Sbjct: 150 TISGTPDAIIQCVKQICVVMLESPPKGATIPYRPK----------PASAPIIFAGGQV-R 198
Query: 255 ADPILPSRSVPSILG--------------AARVPDLQGYADTGNTWPVYSTGLSLVSGLV 300
AD IL S ++L A PDL P ++ G
Sbjct: 199 ADTILASAGNHTVLAQPQPAPAFTIQGQYAIPHPDLTKLHQLAMQHPPFTPLGQTTPGFP 258
Query: 301 G-----ASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVI 355
G + S EL I P + IG +IG+ G I IRQ SGAQI + + + E +
Sbjct: 259 GLDATSPTSSHELTI----PNDLIGCIIGRQGSKINEIRQMSGAQIKIANATEGSAERQV 314
Query: 356 TVTAIESPDDI 366
T+T SP +I
Sbjct: 315 TITG--SPANI 323
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+TIRLL+ K +G IIGK G + ++R+ + A + IS+G P + +V + G
Sbjct: 16 TLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGSCP------ERIVTITGPTD 69
Query: 448 SVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
++ A I L+ +D ++ + + PPV
Sbjct: 70 AIFKAFSMIALKFEEDINASMTNSSVTSKPPV 101
>gi|189237154|ref|XP_973939.2| PREDICTED: similar to igf2 mRNA binding protein, putative
[Tribolium castaneum]
Length = 1116
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 149/332 (44%), Gaps = 45/332 (13%)
Query: 298 GLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITV 357
GL G S+ + +R+L + +G +IG+ G TI+ I Q + A++DV KDN +
Sbjct: 120 GLPGQSRQTDFPLRILVQSDMVGAIIGRQGSTIRQITQQTRARVDVHR-KDNVGSLEKAI 178
Query: 358 TAIESPDDIKSMAVEAVLLLQTKINDEDDDT-------VTIRLLVSSKVIGCIIGKSGSI 410
T +P++ + + ++Q + N+ + + +++L + +IG IIGK G+
Sbjct: 179 TIYGNPENCTNACKRILEVMQQEANNTNKGYAKKYYYEICLKILAHNNLIGRIIGKGGNT 238
Query: 411 INEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDG 470
I I + T + +S + + + ++ V G + ++ A QI +LR D
Sbjct: 239 IKRIMQETDTKITVSSINDINSFNL-ERIITVKGAIDNMSRAEAQISAKLRQSYENDLQ- 296
Query: 471 SRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLS 530
+M P P + P+ A GIG YG L
Sbjct: 297 ------------------AMAPQTMMFPGLHPMAMMATA----GIG-------YGSRGLY 327
Query: 531 MGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEM- 589
G +PY M + GG T + +P NAVG +IG GS++ NI + SGA++++
Sbjct: 328 TGQAPYPGMYP-AGAAQGGGDSQETTYLYIPNNAVGAIIGTKGSHIRNIIRFSGASVKIA 386
Query: 590 ----SDSKSSRGDRVALISGTPEQKRAAENLI 617
+ + ++ +R I G+PE + A+ LI
Sbjct: 387 PIDETKPQETQNERRVTIVGSPEAQWKAQYLI 418
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 113/431 (26%), Positives = 191/431 (44%), Gaps = 84/431 (19%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDP-FPGAKDRVVTIYSHVKDKEDVEV 98
RIL ++G++IG+ G I I Q+TRARV V G+ ++ +TIY
Sbjct: 133 RILVQSDMVGAIIGRQGSTIRQITQQTRARVDVHRKDNVGSLEKAITIY----------- 181
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEEC-QILVPSSQSANIIGK 157
+ E A +L+V AN N K+ E C +IL ++ IIGK
Sbjct: 182 ----GNPENCTNACKRILEVMQQEAN---NTNKGYAKKYYYEICLKILAHNNLIGRIIGK 234
Query: 158 AGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYK 217
G TIKR+ +T T I V+ + + + + + G + + +A ISA + +
Sbjct: 235 GGNTIKRIMQETDTKITVSSINDIN-----SFNLERIITVKGAIDNMSRAEAQISAKLRQ 289
Query: 218 FSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQ 277
S D+ AP +++ P GL+P A ++ A +
Sbjct: 290 -SYENDLQ-----AMAPQTMMFP---------GLHPMA-----------MMATAGI---- 319
Query: 278 GYADTGNTWPVYSTGLSLVSGLV--GASQ----SEELVIRVLCPFNKIGRVIGKGGGTIK 331
GY G TG + G+ GA+Q S+E + P N +G +IG G I+
Sbjct: 320 GYGSRG-----LYTGQAPYPGMYPAGAAQGGGDSQE-TTYLYIPNNAVGAIIGTKGSHIR 373
Query: 332 SIRQASGAQID---VDDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKINDE---- 384
+I + SGA + +D+TK + VT + SP+ +A L+ K+ +E
Sbjct: 374 NIIRFSGASVKIAPIDETKPQETQNERRVTIVGSPEA----QWKAQYLIFEKMREEGFVA 429
Query: 385 --DDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRI-SKGDKPKCADANDELVE 441
DD +T+ ++V S +G IIGK G + E+++ T + +++ +G P+ ++ V
Sbjct: 430 GSDDVRLTVEIMVPSSQVGRIIGKGGQNVRELQRVTGSVIKLPEQGASPQ---EDETTVH 486
Query: 442 VVGEVGSVRDA 452
++G SV+ A
Sbjct: 487 IIGPFFSVQSA 497
Score = 42.0 bits (97), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 33/42 (78%)
Query: 554 LTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSS 595
LT+E++VP++ VG++IGK G N+ +++++G+ I++ + +S
Sbjct: 436 LTVEIMVPSSQVGRIIGKGGQNVRELQRVTGSVIKLPEQGAS 477
>gi|118086587|ref|XP_419049.2| PREDICTED: poly(rC)-binding protein 3 [Gallus gallus]
Length = 448
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 151/325 (46%), Gaps = 22/325 (6%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
L IR+L ++G +IGK G T+K +R+ SGA+I++ + C + I P D
Sbjct: 17 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE-----GSCPERIVTITGPTDAI 71
Query: 368 SMAVEAVLL-LQTKINDEDDDT-------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
A + L + IN ++ VT+RL+V + G +IGK GS I EIR+ T
Sbjct: 72 FKAFSMIALKFEEDINASMTNSTVTSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 131
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNP-PVGA 478
A V+++ GD ++ + V + G ++ + QI + + + K P P A
Sbjct: 132 AQVQVA-GDM--LPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASA 188
Query: 479 DHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGS--GIGMLSSSSLYGYGSLSMGDSPY 536
I++ G + +L S L Q A + + G + L L+M P+
Sbjct: 189 PIIFAGGQ-VRADTILASAGNHTVLAQPQPAPAFTIQGQYAIPHPDLTKLHQLAMQHPPF 247
Query: 537 GSMSSYSSKLYG--GLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS 594
+ + G P + E+ +P + +G +IG+ GS + IR++SGA I+++++
Sbjct: 248 TPLGQTTPGFPGLDATSPTSSHELTIPNDLIGCIIGRQGSKINEIRQMSGAQIKIANATE 307
Query: 595 SRGDRVALISGTPEQKRAAENLIQA 619
+R I+G+P A+ LI A
Sbjct: 308 GSAERQVTITGSPANISLAQYLINA 332
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 96/371 (25%), Positives = 152/371 (40%), Gaps = 77/371 (20%)
Query: 25 INEKDEKGNEE----SVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAK 80
+N KD K +E ++ R+L +GS+IGK G+ + +R+E+ AR+ + +
Sbjct: 1 MNPKDSKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--SCP 58
Query: 81 DRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIA-----NAVANATDNDKK 135
+R+VTI DA+ K + IA + A+ T++
Sbjct: 59 ERIVTI----------------------TGPTDAIFKAFSMIALKFEEDINASMTNSTVT 96
Query: 136 RKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFV 195
K +++VP+SQ ++IGK G+ IK +R T ++V T + V
Sbjct: 97 SKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNST-------ERAV 149
Query: 196 LISGESEAVKKALFAISAIMYKFSPR-EDIPLETTVREAPPSIIIPSDVPIYPPGGLYPN 254
ISG +A+ + + I +M + P+ IP P+ PI GG
Sbjct: 150 TISGTPDAIIQCVKQICVVMLESPPKGATIPYRPK----------PASAPIIFAGGQV-R 198
Query: 255 ADPILPSRSVPSILG--------------AARVPDLQGYADTGNTWPVYSTGLSLVSGLV 300
AD IL S ++L A PDL P ++ G
Sbjct: 199 ADTILASAGNHTVLAQPQPAPAFTIQGQYAIPHPDLTKLHQLAMQHPPFTPLGQTTPGFP 258
Query: 301 G-----ASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVI 355
G + S EL I P + IG +IG+ G I IRQ SGAQI + + + E +
Sbjct: 259 GLDATSPTSSHELTI----PNDLIGCIIGRQGSKINEIRQMSGAQIKIANATEGSAERQV 314
Query: 356 TVTAIESPDDI 366
T+T SP +I
Sbjct: 315 TITG--SPANI 323
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+TIRLL+ K +G IIGK G + ++R+ + A + IS+G P + +V + G
Sbjct: 16 TLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGSCP------ERIVTITGPTD 69
Query: 448 SVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
++ A I L+ +D ++ + + PPV
Sbjct: 70 AIFKAFSMIALKFEEDINASMTNSTVTSKPPV 101
>gi|115495373|ref|NP_001069752.1| poly(rC)-binding protein 3 [Bos taurus]
gi|301767382|ref|XP_002919105.1| PREDICTED: poly(rC)-binding protein 3-like [Ailuropoda melanoleuca]
gi|359323604|ref|XP_848733.3| PREDICTED: poly(rC)-binding protein 3 [Canis lupus familiaris]
gi|109659150|gb|AAI18167.1| Poly(rC) binding protein 3 [Bos taurus]
gi|296490840|tpg|DAA32953.1| TPA: poly(rC) binding protein 3 [Bos taurus]
Length = 361
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 157/344 (45%), Gaps = 40/344 (11%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDD-- 365
L IR+L ++G +IGK G T+K +R+ SGA+I++ + N E ++T+T P D
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG---PTDAI 68
Query: 366 IKSMAVEAVLLLQTKINDEDDDT------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
K+ A+ A + IN + VT+RL+V + G +IGK GS I EIR+ T
Sbjct: 69 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 128
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGAD 479
A V+++ P ++ + V + G ++ + QI + + + K P +
Sbjct: 129 AQVQVAGDMLP---NSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPAST 185
Query: 480 HIYSSGTGISMPPLLPSIP--PVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYG 537
+ +G + PL S + A + G + L L+M +P+
Sbjct: 186 PVIFAGGQVRADPLAASTANLSLLLQPPPLPAYTIQGQYAIPHPDLTKLHQLAMQQTPFP 245
Query: 538 SM----------------SSYSSKLYG---GL---PPPLTLEVLVPANAVGKVIGKAGSN 575
+ S + L G GL PP T E+ +P + +G +IG+ G+
Sbjct: 246 PLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTK 305
Query: 576 LANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQA 619
+ IR++SGA I+++++ +R I+GTP A+ LI A
Sbjct: 306 INEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINA 349
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 93/375 (24%), Positives = 150/375 (40%), Gaps = 91/375 (24%)
Query: 29 DEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYS 88
E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R+VTI
Sbjct: 6 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTI-- 61
Query: 89 HVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIA-----NAVANATDNDKKRKEKEECQ 143
DA+ K A IA + + + +++ K +
Sbjct: 62 --------------------TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLR 101
Query: 144 ILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEA 203
++VP+SQ ++IGK G+ IK +R T ++V T + V ISG +A
Sbjct: 102 LVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNST-------ERAVTISGTPDA 154
Query: 204 VKKALFAISAIMYKFSPR-EDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSR 262
+ + + I +M + P+ IP P+ P+ GG ADP+ S
Sbjct: 155 IIQCVKQICVVMLESPPKGATIPYRPK----------PASTPVIFAGGQV-RADPLAAST 203
Query: 263 S------------VPSILGAARV--PDLQG----------YADTGNTWPVY-STGLSLVS 297
+ +I G + PDL + G T P + L L S
Sbjct: 204 ANLSLLLQPPPLPAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHS 263
Query: 298 -----GLVGAS---------QSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDV 343
L+G S + EL I P + IG +IG+ G I IRQ SGAQI +
Sbjct: 264 SEEAQNLMGQSSGLDASPPASTHELTI----PNDLIGCIIGRQGTKINEIRQMSGAQIKI 319
Query: 344 DDTKDNRDECVITVT 358
+ + E IT+T
Sbjct: 320 ANATEGSSERQITIT 334
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+TIRLL+ K +G IIGK G + ++R+ + A + IS+G+ P + +V + G
Sbjct: 13 TLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCP------ERIVTITGPTD 66
Query: 448 SVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
++ A I + +D ++ + + PPV
Sbjct: 67 AIFKAFAMIAYKFEEDIINSMSNSPATSKPPV 98
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 40/66 (60%), Gaps = 3/66 (4%)
Query: 302 ASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDV-DDTKDNRDECVITVTAI 360
A+ + +R++ P ++ G +IGKGG IK IR+++GAQ+ V D N E +T++
Sbjct: 92 ATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISG- 150
Query: 361 ESPDDI 366
+PD I
Sbjct: 151 -TPDAI 155
>gi|410969851|ref|XP_003991405.1| PREDICTED: poly(rC)-binding protein 3 [Felis catus]
Length = 361
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 157/344 (45%), Gaps = 40/344 (11%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDD-- 365
L IR+L ++G +IGK G T+K +R+ SGA+I++ + N E ++T+T P D
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG---PTDAI 68
Query: 366 IKSMAVEAVLLLQTKINDEDDDT------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
K+ A+ A + IN + VT+RL+V + G +IGK GS I EIR+ T
Sbjct: 69 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 128
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGAD 479
A V+++ P ++ + V + G ++ + QI + + + K P +
Sbjct: 129 AQVQVAGDMLP---NSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPAST 185
Query: 480 HIYSSGTGISMPPLLPSIP--PVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYG 537
+ +G + PL S + A + G + L L+M +P+
Sbjct: 186 PVIFAGGQVRADPLAASTANLSLLLQPPPLPAYTIQGQYAIPHPDLTKLHQLAMQQTPFP 245
Query: 538 SM----------------SSYSSKLYG---GL---PPPLTLEVLVPANAVGKVIGKAGSN 575
+ S + L G GL PP T E+ +P + +G +IG+ G+
Sbjct: 246 PLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDVSPPASTHELTIPNDLIGCIIGRQGTK 305
Query: 576 LANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQA 619
+ IR++SGA I+++++ +R I+GTP A+ LI A
Sbjct: 306 INEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINA 349
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 93/375 (24%), Positives = 150/375 (40%), Gaps = 91/375 (24%)
Query: 29 DEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYS 88
E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R+VTI
Sbjct: 6 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTI-- 61
Query: 89 HVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIA-----NAVANATDNDKKRKEKEECQ 143
DA+ K A IA + + + +++ K +
Sbjct: 62 --------------------TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLR 101
Query: 144 ILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEA 203
++VP+SQ ++IGK G+ IK +R T ++V T + V ISG +A
Sbjct: 102 LVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNST-------ERAVTISGTPDA 154
Query: 204 VKKALFAISAIMYKFSPR-EDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSR 262
+ + + I +M + P+ IP P+ P+ GG ADP+ S
Sbjct: 155 IIQCVKQICVVMLESPPKGATIPYRPK----------PASTPVIFAGGQV-RADPLAAST 203
Query: 263 S------------VPSILGAARV--PDLQG----------YADTGNTWPVY-STGLSLVS 297
+ +I G + PDL + G T P + L L S
Sbjct: 204 ANLSLLLQPPPLPAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHS 263
Query: 298 -----GLVGAS---------QSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDV 343
L+G S + EL I P + IG +IG+ G I IRQ SGAQI +
Sbjct: 264 SEEAQNLMGQSSGLDVSPPASTHELTI----PNDLIGCIIGRQGTKINEIRQMSGAQIKI 319
Query: 344 DDTKDNRDECVITVT 358
+ + E IT+T
Sbjct: 320 ANATEGSSERQITIT 334
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+TIRLL+ K +G IIGK G + ++R+ + A + IS+G+ P + +V + G
Sbjct: 13 TLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCP------ERIVTITGPTD 66
Query: 448 SVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
++ A I + +D ++ + + PPV
Sbjct: 67 AIFKAFAMIAYKFEEDIINSMSNSPATSKPPV 98
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 40/66 (60%), Gaps = 3/66 (4%)
Query: 302 ASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDV-DDTKDNRDECVITVTAI 360
A+ + +R++ P ++ G +IGKGG IK IR+++GAQ+ V D N E +T++
Sbjct: 92 ATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISG- 150
Query: 361 ESPDDI 366
+PD I
Sbjct: 151 -TPDAI 155
>gi|328774304|gb|EGF84341.1| hypothetical protein BATDEDRAFT_8525 [Batrachochytrium
dendrobatidis JAM81]
Length = 343
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 93/337 (27%), Positives = 158/337 (46%), Gaps = 58/337 (17%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
E+ +R L + G VIGKGG ++ ++RQ + ++ V + E ++TV P+
Sbjct: 12 EMTLRSLVSTKEAGVVIGKGGASVANVRQIASVKVGVSKVVPSVSERILTVVG-PLPNVA 70
Query: 367 KSMAVEAVLLLQTKIN-------DEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
K+ A+ A LL++ D +++ IRLLV+ ++IG IIGK+G+ I EI++ +
Sbjct: 71 KAYALIAKNLLESTQTITSNGNLDSTEESTAIRLLVAHQLIGSIIGKAGAKIREIQEASG 130
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGAD 479
A + +SK P+ + + +VE+ G V ++ A+ I + ++ D +
Sbjct: 131 AKIVVSKEMMPQ---STERVVEIYGLVDAIHIAIYHIGVCMKSDNER------------- 174
Query: 480 HIYSSGTGISMPPLLPSIP--PVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMG----- 532
GI IP P L YD S S I +S+S G SL+
Sbjct: 175 -----AAGI--------IPYDPQNSLRYDSSPFSSSAI--ISTSRSTGRNSLTNAIGRRH 219
Query: 533 -----DSPYGSMSSYSSKLYGGLPP-------PLTLEVLVPANAVGKVIGKAGSNLANIR 580
S+ + S +GG P T + V ++ +G ++GK GS++ IR
Sbjct: 220 SSNNSSVSSNSIRAMSGSTFGGAPASSTENPDTRTCVMTVQSDMIGCLMGKGGSHITQIR 279
Query: 581 KISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLI 617
++SGA + +++ S R DR I GT E R A +L+
Sbjct: 280 RLSGAKLHVAEQVSGRNDREITIVGTDEANRKAMSLL 316
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 85/370 (22%), Positives = 144/370 (38%), Gaps = 57/370 (15%)
Query: 25 INEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVV 84
++E D + R L G VIGK G + ++RQ +V V P +R++
Sbjct: 1 MDETDAAETVPEMTLRSLVSTKEAGVVIGKGGASVANVRQIASVKVGVSKVVPSVSERIL 60
Query: 85 TIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQI 144
T+ + P A AL+ + + + N +E ++
Sbjct: 61 TVVGPL----------------PNVAKAYALIAKNLLESTQTITSNGNLDSTEESTAIRL 104
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAV 204
LV +IIGKAGA I+ ++ + I V+ + + T + V I G +A+
Sbjct: 105 LVAHQLIGSIIGKAGAKIREIQEASGAKIVVSKEMMPQST-------ERVVEIYGLVDAI 157
Query: 205 KKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSV 264
A++ I M + R + IIP D P L ++ P S +
Sbjct: 158 HIAIYHIGVCMKSDNER-------------AAGIIPYD----PQNSLRYDSSPFSSSAII 200
Query: 265 PSILGAAR--VPDLQGYADTGNTWPVYSTGLSLVSGLVG----ASQSEELVIRVLCPF-- 316
+ R + + G + N V S + +SG AS +E R C
Sbjct: 201 STSRSTGRNSLTNAIGRRHSSNNSSVSSNSIRAMSGSTFGGAPASSTENPDTRT-CVMTV 259
Query: 317 --NKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAV 374
+ IG ++GKGG I IR+ SGA++ V + R++ IT+ + + +A+
Sbjct: 260 QSDMIGCLMGKGGSHITQIRRLSGAKLHVAEQVSGRNDREITIVGTDEANR------KAM 313
Query: 375 LLLQTKINDE 384
LL K+ E
Sbjct: 314 SLLYNKLEAE 323
>gi|297821485|ref|XP_002878625.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297324464|gb|EFH54884.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 633
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 106/450 (23%), Positives = 184/450 (40%), Gaps = 58/450 (12%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVD 99
R++C VIG +IG +G V++ +R+ET ++ P G+ VV I + V +
Sbjct: 28 RVVCHASVIGGIIGSNGYVVSKLRRETGTKIHCESPVNGSDHWVVFIVGSTAVNKSVLLT 87
Query: 100 DEFNDKE----------PLCAAQDALLKV--HAAIANAVANATDNDKKRKEKEECQILVP 147
D D + AAQ AL++V + + A + E+ C IL
Sbjct: 88 DRVGDFSGGEHEDWVTCDVSAAQTALIRVLERSWVVLAAKDGGGVVDGEDEEAYCGILAD 147
Query: 148 SSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKA 207
+Q ++G G ++ +R + I+V P C D + I+G+ AVKKA
Sbjct: 148 RNQIGAVLGLGGKNVEWMRRSSGAMIRVLPPPI------CGTNTDELIQITGDVLAVKKA 201
Query: 208 LFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSI 267
L +S + P P ++ S S+ P +PN +P+ S
Sbjct: 202 LVMVSTCIQDNPPVNGYPQPLCIKAYESSTDGNSE---DPHSEFFPNLRSSVPNASDS-- 256
Query: 268 LGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGG 327
A+ L D GN ++V +++ G +IGK G
Sbjct: 257 --ASSNRHLPAVYDEGN------------------GTERKVVFKIIFTSVVAGGIIGKQG 296
Query: 328 GTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKINDEDDD 387
I++++ +GA I + E V+T++A E+ + S A A+ L+ + + D +
Sbjct: 297 TIIRALQNETGASISIGAPLKVSGERVVTISARENLESRYSHAQNALALVFARSVEIDVE 356
Query: 388 -----------TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDK-PKCADA 435
V +LLV S+ ++G E T ADV I ++ +
Sbjct: 357 KGLRPGLHNGAVVKTKLLVPSQFANSLVGNGN---REAIIATGADVHIPVDNQILEWISE 413
Query: 436 NDELVEVVGEVGSVRDALVQIILRLRDDAL 465
N+ ++E+ GE G V+ AL + +LR++ L
Sbjct: 414 NEVVIEIKGEYGHVQKALTHVSSKLRENLL 443
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 85/363 (23%), Positives = 141/363 (38%), Gaps = 105/363 (28%)
Query: 306 EELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDD 365
+E IRV+C + IG +IG G + +R+ +G +I + + D V+ +
Sbjct: 23 DETAIRVVCHASVIGGIIGSNGYVVSKLRRETGTKIHCESPVNGSDHWVVFI-------- 74
Query: 366 IKSMAVEAVLLLQTKIND----EDDDTVT----------IRLLVSSKV------------ 399
+ S AV +LL ++ D E +D VT IR+L S V
Sbjct: 75 VGSTAVNKSVLLTDRVGDFSGGEHEDWVTCDVSAAQTALIRVLERSWVVLAAKDGGGVVD 134
Query: 400 ----------------IGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVV 443
IG ++G G + +R+ + A +R+ P C DEL+++
Sbjct: 135 GEDEEAYCGILADRNQIGAVLGLGGKNVEWMRRSSGAMIRVLP--PPICGTNTDELIQIT 192
Query: 444 GEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGAD------HIYSSGT-GISMPP---L 493
G+V +V+ ALV + ++D NPPV Y S T G S P
Sbjct: 193 GDVLAVKKALVMVSTCIQD----------NPPVNGYPQPLCIKAYESSTDGNSEDPHSEF 242
Query: 494 LPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPP 553
P++ P +DS S L ++Y G+ G
Sbjct: 243 FPNLRSSVP----NASDSASSNRHL--PAVYDEGN--------------------GTERK 276
Query: 554 LTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAA 613
+ +++ + G +IGK G+ + ++ +GA+I + G+RV IS A
Sbjct: 277 VVFKIIFTSVVAGGIIGKQGTIIRALQNETGASISIGAPLKVSGERVVTIS-------AR 329
Query: 614 ENL 616
ENL
Sbjct: 330 ENL 332
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 96/216 (44%), Gaps = 37/216 (17%)
Query: 9 RSQRDNDRDGKNQKRRINEKDEKGN--EESVIYRILCPDGVIGSVIGKSGKVINSIRQET 66
RS N D + R + ++GN E V+++I+ V G +IGK G +I +++ ET
Sbjct: 247 RSSVPNASDSASSNRHLPAVYDEGNGTERKVVFKIIFTSVVAGGIIGKQGTIIRALQNET 306
Query: 67 RARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAA----- 121
A + + P + +RVVTI + +E++E AQ+AL V A
Sbjct: 307 GASISIGAPLKVSGERVVTISA----RENLE--------SRYSHAQNALALVFARSVEID 354
Query: 122 IANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+ + N K K +LVPS + +++G R +I T D
Sbjct: 355 VEKGLRPGLHNGAVVKTK----LLVPSQFANSLVGNG----------NREAIIATGADVH 400
Query: 182 EPTHSCAMEF--DNFVLIS--GESEAVKKALFAISA 213
P + +E+ +N V+I GE V+KAL +S+
Sbjct: 401 IPVDNQILEWISENEVVIEIKGEYGHVQKALTHVSS 436
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 554 LTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAA 613
+TLE+ V +A+G + G+ G+ + N+R+ISGA +++ D V +ISG PEQ R A
Sbjct: 564 ITLELTVEKDALGSLYGRDGTGVDNLRQISGAGVDVKDPTGIEAT-VLIISGNPEQTRTA 622
Query: 614 ENLIQAFI 621
+LI++ +
Sbjct: 623 MSLIESIL 630
>gi|427796273|gb|JAA63588.1| Putative polyc-binding alphacp-1, partial [Rhipicephalus
pulchellus]
Length = 510
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 94/352 (26%), Positives = 156/352 (44%), Gaps = 65/352 (18%)
Query: 305 SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT----AI 360
S L +R++ ++G +IGK G IK R+ SGA+I++ D + E ++TVT AI
Sbjct: 71 SVTLTVRLIMQGKEVGSIIGKKGDNIKKFREESGAKINISD--GSCPERIVTVTGSTEAI 128
Query: 361 ESPDDIKSMAVEAVLL---------------LQTKINDEDDDTVTIRLLVSSKVIGCIIG 405
+ + E +L LQ+ + VT+RL+V + G +IG
Sbjct: 129 LKAFSLIARKFEEMLSLLCLPVQTVGPTLQELQSNGSHLPKPPVTLRLIVPASQCGSLIG 188
Query: 406 KSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDAL 465
K GS I EIR+ T A ++++ P ++ + V V G ++ + QI + +
Sbjct: 189 KGGSKIKEIREVTGASIQVASEMLP---NSTERAVTVSGTAEAITKCIYQICCVMME--- 242
Query: 466 KDRDGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYG 525
+PP GA Y P++PPV + +A + G + L
Sbjct: 243 -------SPPKGATIPYRPK---------PAMPPV--IFAGGQAYTVQGQYAIPHPDLTK 284
Query: 526 YGSLSMGDSPY---GSMSSYSSKLYGGLPPPLTL-----------------EVLVPANAV 565
L++ +P S+ + + + L L E+ +P + +
Sbjct: 285 LHQLALQHAPLLPGHSVGAINPQALAALATTNNLRPNTAAAAIATASTTTTEMTIPNDLI 344
Query: 566 GKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLI 617
G +IGK GS + IR++SGATI++S+S+ DR ISGTPE A+ LI
Sbjct: 345 GCIIGKGGSKINEIRQLSGATIKISNSEEGSKDRTVTISGTPEAINLAQYLI 396
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 91/359 (25%), Positives = 156/359 (43%), Gaps = 48/359 (13%)
Query: 25 INEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVV 84
++ K G ++ R++ +GS+IGK G I R+E+ A++ + D +R+V
Sbjct: 62 VDTKALDGPSVTLTVRLIMQGKEVGSIIGKKGDNIKKFREESGAKINISDG--SCPERIV 119
Query: 85 TIYSHVKD--KEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEEC 142
T+ + K + +F + L L V ++ K
Sbjct: 120 TVTGSTEAILKAFSLIARKFEEMLSLLC-----LPVQTVGPTLQELQSNGSHLPKPPVTL 174
Query: 143 QILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESE 202
+++VP+SQ ++IGK G+ IK +R T SI+V + T + V +SG +E
Sbjct: 175 RLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASEMLPNST-------ERAVTVSGTAE 227
Query: 203 AVKKALFAISAIMYKFSPR-EDIPLETTVREAPPSIIIPSDVPIYPPGGLY--PNAD--- 256
A+ K ++ I +M + P+ IP + A P +I + Y G Y P+ D
Sbjct: 228 AITKCIYQICCVMMESPPKGATIPYRP--KPAMPPVIF-AGGQAYTVQGQYAIPHPDLTK 284
Query: 257 ---------PILPSRSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEE 307
P+LP SV GA L A T N P + + ++ + E
Sbjct: 285 LHQLALQHAPLLPGHSV----GAINPQALAALATTNNLRP----NTAAAAIATASTTTTE 336
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
+ I P + IG +IGKGG I IRQ SGA I + ++++ + +T++ +P+ I
Sbjct: 337 MTI----PNDLIGCIIGKGGSKINEIRQLSGATIKISNSEEGSKDRTVTISG--TPEAI 389
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 6/84 (7%)
Query: 379 TKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDE 438
TK D T+T+RL++ K +G IIGK G I + R+ + A + IS G P +
Sbjct: 64 TKALDGPSVTLTVRLIMQGKEVGSIIGKKGDNIKKFREESGAKINISDGSCP------ER 117
Query: 439 LVEVVGEVGSVRDALVQIILRLRD 462
+V V G ++ A I + +
Sbjct: 118 IVTVTGSTEAILKAFSLIARKFEE 141
>gi|294460692|gb|ADE75920.1| unknown [Picea sitchensis]
Length = 199
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/108 (48%), Positives = 69/108 (63%), Gaps = 10/108 (9%)
Query: 524 YG-YGSLSMGDSPYGSMSSYSSK------LYGGLPPPL---TLEVLVPANAVGKVIGKAG 573
YG +G+ G S Y + YSS GG P + T+EV +P NAVG V+GK G
Sbjct: 76 YGSFGTFQSGGSGYDPIQGYSSSRTTDSGFSGGFPKNVSTTTVEVTIPKNAVGSVLGKRG 135
Query: 574 SNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFI 621
SN+ +IR+ISGA +++ DS+S DRV ISGTPEQ AA++L+QAFI
Sbjct: 136 SNIQHIREISGAKVKLHDSESGASDRVIEISGTPEQTHAAKSLLQAFI 183
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 30/54 (55%)
Query: 33 NEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTI 86
N + + P +GSV+GK G I IR+ + A+VK+ D GA DRV+ I
Sbjct: 112 NVSTTTVEVTIPKNAVGSVLGKRGSNIQHIREISGAKVKLHDSESGASDRVIEI 165
>gi|134026176|gb|AAI35317.1| LOC733863 protein [Xenopus (Silurana) tropicalis]
Length = 475
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 153/348 (43%), Gaps = 44/348 (12%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
L IR+L ++G +IGK G T+K +R+ SGA+I++ + C + I P D
Sbjct: 17 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE-----GSCPERIVTITGPTDAI 71
Query: 368 SMAVEAVLL-LQTKINDEDDDT-------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
A + L + IN ++ VT+RL+V + G +IGK GS I EIR+ T
Sbjct: 72 FKAFSMIALKFEEDINASMTNSTVTSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 131
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNP-PVGA 478
A V+++ GD ++ + V + G ++ + QI + + + K P P
Sbjct: 132 AQVQVA-GD--MLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASG 188
Query: 479 DHIYSSG--------------TGISMPPLLPSIPPVGPLGYDQRADSGSG---------- 514
I++ G T ++ P P+ G S +
Sbjct: 189 PIIFAGGQVRAETILASAGNHTVLAQPQPAPAFAIQGQYAIPHPDVSSAHANYTLLFLFI 248
Query: 515 -IGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYG--GLPPPLTLEVLVPANAVGKVIGK 571
G S+L L+M +P+ + + G P + E+ +P + +G +IG+
Sbjct: 249 CFGQHLLSTLTKLHQLAMQHTPFTPLGQTTPGFPGLDATSPTSSHELTIPNDLIGCIIGR 308
Query: 572 AGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQA 619
GS + IR++SGA I+++++ G+R I+G+P A+ LI A
Sbjct: 309 QGSKINEIRQMSGAQIKIANASEGNGERQVTITGSPANISLAQYLINA 356
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 93/380 (24%), Positives = 150/380 (39%), Gaps = 85/380 (22%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH 89
E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R+VTI
Sbjct: 10 EGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--SCPERIVTI--- 64
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAV-----ANATDNDKKRKEKEECQI 144
DA+ K + IA A+ T++ K ++
Sbjct: 65 -------------------TGPTDAIFKAFSMIALKFEEDINASMTNSTVTSKPPVTLRL 105
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAV 204
+VP+SQ ++IGK G+ IK +R T ++V T + V ISG +A+
Sbjct: 106 VVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNST-------ERAVTISGTPDAI 158
Query: 205 KKALFAISAIMYKFSPR-EDIPL------------------ETTVREAPPSIII--PSDV 243
+ + I +M + P+ IP ET + A ++ P
Sbjct: 159 IQCVKQICVVMLESPPKGATIPYRPKPASGPIIFAGGQVRAETILASAGNHTVLAQPQPA 218
Query: 244 PIYPPGGLYPNADP---------------ILPSRSVPSILGAARVPDLQG--YADTGNTW 286
P + G Y P I + + S L +Q + G T
Sbjct: 219 PAFAIQGQYAIPHPDVSSAHANYTLLFLFICFGQHLLSTLTKLHQLAMQHTPFTPLGQTT 278
Query: 287 PVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDT 346
P + GL S + S EL I P + IG +IG+ G I IRQ SGAQI + +
Sbjct: 279 PGFP-GLDATS----PTSSHELTI----PNDLIGCIIGRQGSKINEIRQMSGAQIKIANA 329
Query: 347 KDNRDECVITVTAIESPDDI 366
+ E +T+T SP +I
Sbjct: 330 SEGNGERQVTITG--SPANI 347
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 54/105 (51%), Gaps = 15/105 (14%)
Query: 381 INDED------DDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCAD 434
IND + + T+TIRLL+ K +G IIGK G + ++R+ + A + IS+G P
Sbjct: 3 INDANAPEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGSCP---- 58
Query: 435 ANDELVEVVGEVGSVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
+ +V + G ++ A I L+ +D ++ + + PPV
Sbjct: 59 --ERIVTITGPTDAIFKAFSMIALKFEEDINASMTNSTVTSKPPV 101
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 6/95 (6%)
Query: 383 DEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDE-LVE 441
D T + L + + +IGCIIG+ GS INEIR+ + A ++I+ ++ N E V
Sbjct: 285 DATSPTSSHELTIPNDLIGCIIGRQGSKINEIRQMSGAQIKIANA-----SEGNGERQVT 339
Query: 442 VVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPV 476
+ G ++ A I L L + S PV
Sbjct: 340 ITGSPANISLAQYLINASLEMAKLSTQTASVTTPV 374
>gi|297803502|ref|XP_002869635.1| hypothetical protein ARALYDRAFT_492216 [Arabidopsis lyrata subsp.
lyrata]
gi|297315471|gb|EFH45894.1| hypothetical protein ARALYDRAFT_492216 [Arabidopsis lyrata subsp.
lyrata]
Length = 495
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 113/399 (28%), Positives = 180/399 (45%), Gaps = 67/399 (16%)
Query: 259 LPSRSVPSILGAARV--PDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPF 316
P + P L AA PD +A WP G G + V R++ P
Sbjct: 40 FPELNQPDSLAAAETTAPDTNDFA--AERWP----------GWPG-----DCVFRMIVPV 82
Query: 317 NKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVLL 376
+K+G +IG+ G IK + + + A+I V D N + ++ ++ E P+ S A++AVL
Sbjct: 83 SKVGAIIGRKGDFIKKMCEETRARIKVLDGPVNTPDRIVLISGKEEPEAYMSPAMDAVLR 142
Query: 377 LQTKIN---DEDDDTV--------TIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRI- 424
+ +++ D DDD V ++RLLV+S +IGK GS+I I + + A VRI
Sbjct: 143 VFRRVSGLPDNDDDDVQNAGSAFCSVRLLVASTQAINLIGKQGSLIKSIVENSGASVRIL 202
Query: 425 SKGDKPKCADANDELVEVVGE-----------VGSVRDALV--QIILRLRDDALKDRDGS 471
S+ + P A ++ +V++ GE VG +R LV ++ L +
Sbjct: 203 SEEETPFYAAQDERIVDLQGEALKILKALEAIVGHLRKFLVDHTVVPLFEKQYLARVSQT 262
Query: 472 RNPPVGAD-----HIYSSGTGISMPPLLPSIPPVGPLGYDQRADSG---SGIGMLSSSSL 523
R A+ H SS LL P+ L D R +S +G+ + S +
Sbjct: 263 RQEEPLAESKSSLHTISSNVIEPDFSLLARRDPLF-LDRDARVESRVQPTGVSIYSQDPV 321
Query: 524 YGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKIS 583
LS SP ++ SS + + + +P + +IG G+N+A IR+ S
Sbjct: 322 -----LSARHSP--GLARVSSAFVTQV----SQTMQIPFSYAEDIIGVEGANIAYIRRRS 370
Query: 584 GATIEMSDSKSSRGDRVAL-ISGTPEQKRAAENLIQAFI 621
GATI + +S D++ + I GT Q + AE LIQ FI
Sbjct: 371 GATITIKESP--HPDQITVEIKGTSSQVQTAEQLIQEFI 407
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 147/326 (45%), Gaps = 38/326 (11%)
Query: 38 IYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVE 97
++R++ P +G++IG+ G I + +ETRAR+KV+D DR+V I KE+ E
Sbjct: 75 VFRMIVPVSKVGAIIGRKGDFIKKMCEETRARIKVLDGPVNTPDRIVLI----SGKEEPE 130
Query: 98 VDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEEC--QILVPSSQSANII 155
+ A DA+L+V ++ + + D+D + C ++LV S+Q+ N+I
Sbjct: 131 AY--------MSPAMDAVLRVFRRVS-GLPDNDDDDVQNAGSAFCSVRLLVASTQAINLI 181
Query: 156 GKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIM 215
GK G+ IK + + S+++ + E T A + + V + GE+ + KAL AI +
Sbjct: 182 GKQGSLIKSIVENSGASVRIL---SEEETPFYAAQDERIVDLQGEALKILKALEAIVGHL 238
Query: 216 YKFSPRED-IPL--------------ETTVREAPPSIIIPSDVPIYPPGGLYPNADPILP 260
KF +PL E + E+ S+ S I P L DP+
Sbjct: 239 RKFLVDHTVVPLFEKQYLARVSQTRQEEPLAESKSSLHTISSNVIEPDFSLLARRDPLFL 298
Query: 261 SRSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIG 320
R + + + Y+ +S GL+ VS S+ + I PF+
Sbjct: 299 DRDA-RVESRVQPTGVSIYSQDPVLSARHSPGLARVSSAFVTQVSQTMQI----PFSYAE 353
Query: 321 RVIGKGGGTIKSIRQASGAQIDVDDT 346
+IG G I IR+ SGA I + ++
Sbjct: 354 DIIGVEGANIAYIRRRSGATITIKES 379
>gi|307196422|gb|EFN78011.1| Insulin-like growth factor 2 mRNA-binding protein 1 [Harpegnathos
saltator]
Length = 647
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 155/349 (44%), Gaps = 61/349 (17%)
Query: 296 VSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVI 355
SGL G+ + + +R+L + +G +IG+ G TI+ I Q S A++DV KDN
Sbjct: 131 FSGLPGSGRQTDFPLRILVQSDMVGAIIGRQGSTIRQITQVSRARVDV-HRKDNVGSLEK 189
Query: 356 TVTAIESPDDIKSMAVEAVLLLQTKINDED---------DDT-------VTIRLLVSSKV 399
+T +PD+ + + + ++Q + N+ + DD +T+++L + +
Sbjct: 190 AITIYGNPDNCTNACKKILEVMQQEANNTNKGYDEGSNSDDHGAVNSYEITLKILAHNNL 249
Query: 400 IGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILR 459
IG IIGK G+ I I + T + +S + + + ++ V G + ++ A I +
Sbjct: 250 IGRIIGKGGNTIKRIMQDTDTKITVSSINDINSFNL-ERIITVKGTIENMSKAESMISSK 308
Query: 460 LRDDALKDRDGSRNPPVGADHIYSSGTGISMPP---LLPSIPPVGPLGYDQRADSGSGIG 516
LR D +M P + P + P+ + S G G
Sbjct: 309 LRQSYENDLQ-------------------AMAPQSMMFPGLHPMAMMSTAGMGYSSRGPG 349
Query: 517 MLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLE---VLVPANAVGKVIGKAG 573
+ YGS G +PY SS ++ G+P T E + +P N+VG +IG G
Sbjct: 350 L--------YGS---GPAPYPYQSSLQTQQ--GVPASDTQETTFLYIPNNSVGAIIGTKG 396
Query: 574 SNLANIRKISGATI-----EMSDSKSSRGDRVALISGTPEQKRAAENLI 617
S++ NI + SGA++ E + +R I G+PE + A+ LI
Sbjct: 397 SHIRNIIRFSGASVKIAPLEQDKPAEQQTERKVTIVGSPESQWKAQYLI 445
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 114/435 (26%), Positives = 190/435 (43%), Gaps = 68/435 (15%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDP-FPGAKDRVVTIYSHVKDKEDVEV 98
RIL ++G++IG+ G I I Q +RARV V G+ ++ +TIY
Sbjct: 146 RILVQSDMVGAIIGRQGSTIRQITQVSRARVDVHRKDNVGSLEKAITIYG---------- 195
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAV-------ANATDNDKKRKEKEECQILVPSSQS 151
+ + A +L+V AN +N+ D+ + +IL ++
Sbjct: 196 -----NPDNCTNACKKILEVMQQEANNTNKGYDEGSNSDDHGAVNSYEITLKILAHNNLI 250
Query: 152 ANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAI 211
IIGK G TIKR+ T T I V S + + + + G E + KA I
Sbjct: 251 GRIIGKGGNTIKRIMQDTDTKITV-----SSINDINSFNLERIITVKGTIENMSKAESMI 305
Query: 212 SAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAA 271
S+ + + S D+ AP S++ P GL+P + S + ++
Sbjct: 306 SSKLRQ-SYENDLQAM-----APQSMMFP---------GLHP-----MAMMSTAGMGYSS 345
Query: 272 RVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIK 331
R P L Y +P Y + L G V AS ++E + P N +G +IG G I+
Sbjct: 346 RGPGL--YGSGPAPYP-YQSSLQTQQG-VPASDTQETTF-LYIPNNSVGAIIGTKGSHIR 400
Query: 332 SIRQASGAQIDV---DDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKINDE---- 384
+I + SGA + + + K + VT + SP+ +A L+ K+ +E
Sbjct: 401 NIIRFSGASVKIAPLEQDKPAEQQTERKVTIVGSPES----QWKAQYLIFEKMREEGYVS 456
Query: 385 --DDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGD-KPKCADANDELVE 441
+D +TI +LV S +G IIGK G + E+++ T + +++S+ P AD + V
Sbjct: 457 GTEDVRLTIEILVPSAQVGRIIGKGGQNVRELQRVTGSVIKLSEQQATPPSAD-EETTVH 515
Query: 442 VVGEVGSVRDALVQI 456
++G SV+ A +I
Sbjct: 516 IIGPFFSVQSAQRRI 530
Score = 45.4 bits (106), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 34/42 (80%)
Query: 554 LTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSS 595
LT+E+LVP+ VG++IGK G N+ +++++G+ I++S+ +++
Sbjct: 463 LTIEILVPSAQVGRIIGKGGQNVRELQRVTGSVIKLSEQQAT 504
>gi|225445949|ref|XP_002264417.1| PREDICTED: KH domain-containing protein At4g18375 isoform 1 [Vitis
vinifera]
Length = 466
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 92/336 (27%), Positives = 156/336 (46%), Gaps = 28/336 (8%)
Query: 309 VIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKS 368
V R++ P K+G +IG+ G IK + + + A+I V D + ++ ++ E P+ S
Sbjct: 79 VFRLIVPVLKVGSIIGRKGELIKKMCEETRARIRVLDGAVGTSDRIVLISGREEPEAPLS 138
Query: 369 MAVEAVLLLQ---TKINDEDDD----------TVTIRLLVSSKVIGCIIGKSGSIINEIR 415
A++AV+ + T +++ + D +IRLLV+S +IGK GS+I I+
Sbjct: 139 PAMDAVIRVFKRVTGLSESEGDGKAYGAAGVAFCSIRLLVASTQAINLIGKQGSLIKSIQ 198
Query: 416 KRTKADVRISKGDK-PKCADANDELVEVVGEVGSVRDALVQIILRLR-----DDALKDRD 469
+ T A VR+ GD+ P A A++ +VE+ GE V+ AL ++ LR L +
Sbjct: 199 ESTGASVRVLSGDEVPFYAAADERIVELQGEALKVQKALEAVVGHLRKFLVDHSVLPLFE 258
Query: 470 GSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSL 529
+ N + D + S LL G +G D + L + + L
Sbjct: 259 RTYNATISQDRQSDTWADKS---LLHGTSQTG-MGSDYSLPAKRESLYLDRETQMEHSGL 314
Query: 530 SMGDSPYGSMSSYSSKLYGGLPPPLTLEVL----VPANAVGKVIGKAGSNLANIRKISGA 585
M +G +S S G P+ ++ +P + +IG G+N+A IR+ SGA
Sbjct: 315 PMYGQEHG-LSGIRSSGLGRAGAPIVTQIAQTMQIPLSYAEDIIGIGGANIAYIRRTSGA 373
Query: 586 TIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFI 621
+ + +S+ + I GT Q + A+ LIQ FI
Sbjct: 374 ILTVQESRGLPDEITVEIKGTSSQVQTAQQLIQEFI 409
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 154/349 (44%), Gaps = 31/349 (8%)
Query: 26 NEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVT 85
+EK G ++R++ P +GS+IG+ G++I + +ETRAR++V+D G DR+V
Sbjct: 67 SEKKWPGWPGDCVFRLIVPVLKVGSIIGRKGELIKKMCEETRARIRVLDGAVGTSDRIVL 126
Query: 86 IYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEK-EECQI 144
I +E+ E PL A DA+++V + + D C I
Sbjct: 127 I----SGREEPEA--------PLSPAMDAVIRVFKRVTGLSESEGDGKAYGAAGVAFCSI 174
Query: 145 --LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESE 202
LV S+Q+ N+IGK G+ IK ++ T S++V D P ++ A E V + GE+
Sbjct: 175 RLLVASTQAINLIGKQGSLIKSIQESTGASVRVLSGDEV-PFYAAADE--RIVELQGEAL 231
Query: 203 AVKKALFAISAIMYKFSPREDI-PLETTVREAPPSIIIPSDVP-----IYPPGGLYPNAD 256
V+KAL A+ + KF + PL A S SD ++ +D
Sbjct: 232 KVQKALEAVVGHLRKFLVDHSVLPLFERTYNATISQDRQSDTWADKSLLHGTSQTGMGSD 291
Query: 257 PILPSRSVPSILGAARVPDLQG---YADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVL 313
LP++ L + G Y + S+GL G GA ++ +
Sbjct: 292 YSLPAKRESLYLDRETQMEHSGLPMYGQEHGLSGIRSSGL----GRAGAPIVTQIAQTMQ 347
Query: 314 CPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIES 362
P + +IG GG I IR+ SGA + V +++ DE + + S
Sbjct: 348 IPLSYAEDIIGIGGANIAYIRRTSGAILTVQESRGLPDEITVEIKGTSS 396
>gi|168018585|ref|XP_001761826.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686881|gb|EDQ73267.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 355
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 156/337 (46%), Gaps = 30/337 (8%)
Query: 309 VIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKS 368
V R++ P K+G +IG+ G +K + + + ++I + + E ++ V+A E P+ S
Sbjct: 11 VFRLIVPVQKVGGIIGRKGEFVKRMCEETRSRIKILEGVPGTAERIVMVSAREDPEAAIS 70
Query: 369 MAVEAVLLLQTKIND----EDDDT--------VTIRLLVSSKVIGCIIGKSGSIINEIRK 416
A+E +L + ++ + E D V+ RLLV++ G +IG+ G+ I I+
Sbjct: 71 PAMEGLLRVHRRVIEGAEPESADAEIAPGGAPVSSRLLVAATQAGSLIGRQGATIKSIQD 130
Query: 417 RTKADVRI--SKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRD----G 470
+ A VR+ + + P CA A+D +VEV GE +V+ A ++ LR L DR
Sbjct: 131 SSGATVRVLPAAEELPLCALADDRVVEVTGEPRNVQRATELVVAHLR-KFLVDRSVLPLF 189
Query: 471 SRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLS 530
N V A+ T S P Y S G L S S
Sbjct: 190 ELNRAV-ANQSNQQSTASQW-QQPSSTQQQQPPNYSSNDSSYYGAAELPHHSQPQQQSHD 247
Query: 531 MGDSPYG-SMSSYSSKLYGGLPPP--------LTLEVLVPANAVGKVIGKAGSNLANIRK 581
+ + +G S+ L G + PP +T + +P + +IG AG+N++ +R+
Sbjct: 248 LANHHHGLSLYGRDPTLGGTIVPPTPAPVITQVTQHMQIPLSYADAIIGGAGANISYMRR 307
Query: 582 ISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQ 618
SGATI + +++S G+ I G+ Q + A+ LIQ
Sbjct: 308 TSGATITIQETRSVPGEMTVEIHGSASQVQTAQQLIQ 344
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 148/333 (44%), Gaps = 27/333 (8%)
Query: 38 IYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVE 97
++R++ P +G +IG+ G+ + + +ETR+R+K+++ PG +R+V V +ED E
Sbjct: 11 VFRLIVPVQKVGGIIGRKGEFVKRMCEETRSRIKILEGVPGTAERIVM----VSAREDPE 66
Query: 98 VDDEFNDKEPLCAAQDALLKVH-AAIANAVANATDND-KKRKEKEECQILVPSSQSANII 155
+ A + LL+VH I A + D + ++LV ++Q+ ++I
Sbjct: 67 AA--------ISPAMEGLLRVHRRVIEGAEPESADAEIAPGGAPVSSRLLVAATQAGSLI 118
Query: 156 GKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIM 215
G+ GATIK ++ + +++V P A+E CA+ D V ++GE V++A + A +
Sbjct: 119 GRQGATIKSIQDSSGATVRVLP--AAEELPLCALADDRVVEVTGEPRNVQRATELVVAHL 176
Query: 216 YKF-SPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVP 274
KF R +PL R S + P S + S GAA +P
Sbjct: 177 RKFLVDRSVLPLFELNRAVANQSNQQSTASQWQQPSSTQQQQPPNYSSNDSSYYGAAELP 236
Query: 275 DLQGYADTGNTWPVYSTGLSL------VSGLVGASQSEELVIRVL----CPFNKIGRVIG 324
+ + GLSL + G + ++ +V P + +IG
Sbjct: 237 HHSQPQQQSHDLANHHHGLSLYGRDPTLGGTIVPPTPAPVITQVTQHMQIPLSYADAIIG 296
Query: 325 KGGGTIKSIRQASGAQIDVDDTKDNRDECVITV 357
G I +R+ SGA I + +T+ E + +
Sbjct: 297 GAGANISYMRRTSGATITIQETRSVPGEMTVEI 329
>gi|359489188|ref|XP_002272998.2| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
vinifera]
Length = 343
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 155/337 (45%), Gaps = 76/337 (22%)
Query: 303 SQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIES 362
+++++++ R++ P +IG+VIGK G I+ IR+ + A I + D +E VI +++ +S
Sbjct: 55 AKNQDVLFRIVVPSRQIGKVIGKEGSRIQKIREETKATIKIADAIARHEERVIIISSKDS 114
Query: 363 PDDIKSMAVEAVLLLQTKINDEDDDTV-------------TIRLLVSSKVIGCIIGKSGS 409
+++ S A A+L + + I EDD IRLL++ GC+IG SG
Sbjct: 115 -ENVISDAENALLQVASLILKEDDSNTDALKVGVGHVVANAIRLLIAGSQAGCLIGMSGQ 173
Query: 410 IINEIRKRTKADVRISKGDK-PKCADAN--DELVEVVGEVGSVRDALVQIILRLRDDALK 466
I ++R + A + I ++ P CA A+ D +V++ G+V +V AL +I +LR+
Sbjct: 174 NIEKLRNSSGATITILPQNQLPLCASAHDSDRMVQISGDVPAVLKALEEIGCQLRE---- 229
Query: 467 DRDGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGY 526
NPP IS+ P+ Y+ + S + +S+ Y
Sbjct: 230 ------NPPRQV---------ISISPI-----------YNPNTNRTSQQYLDPASA--DY 261
Query: 527 GSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGAT 586
+L+M ++P VG +IG+ GSN++ IR SGA
Sbjct: 262 VTLNM---------------------------MIPETLVGGLIGRCGSNISRIRNESGAM 294
Query: 587 IEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFIMA 623
I++ K + R G+ +Q A+ + +I +
Sbjct: 295 IKVYGGKGEQNHRQIQFGGSAQQVALAKQRVDEYIYS 331
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 142/330 (43%), Gaps = 82/330 (24%)
Query: 17 DGKNQKRRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPF 76
D ++ KRR +D V++RI+ P IG VIGK G I IR+ET+A +K+ D
Sbjct: 47 DHRSPKRRAKNQD-------VLFRIVVPSRQIGKVIGKEGSRIQKIREETKATIKIADAI 99
Query: 77 PGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDK-- 134
++RV+ I S KD E+V D A++ALL+V + I + TD K
Sbjct: 100 ARHEERVIIISS--KDSENVISD-----------AENALLQVASLILKEDDSNTDALKVG 146
Query: 135 -KRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDN 193
++L+ SQ+ +IG +G I++LR+ + +I + P++ P + A + D
Sbjct: 147 VGHVVANAIRLLIAGSQAGCLIGMSGQNIEKLRNSSGATITILPQN-QLPLCASAHDSDR 205
Query: 194 FVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYP 253
V ISG+ AV KAL I +RE PP +I S PIY P
Sbjct: 206 MVQISGDVPAVLKALEEIGC---------------QLRENPPRQVI-SISPIYNP----- 244
Query: 254 NADPILPSRSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVL 313
+T T Y + + ++ + + ++
Sbjct: 245 ---------------------------NTNRTSQQY----------LDPASADYVTLNMM 267
Query: 314 CPFNKIGRVIGKGGGTIKSIRQASGAQIDV 343
P +G +IG+ G I IR SGA I V
Sbjct: 268 IPETLVGGLIGRCGSNISRIRNESGAMIKV 297
>gi|395839825|ref|XP_003792776.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 1 [Otolemur garnettii]
Length = 597
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 160/334 (47%), Gaps = 35/334 (10%)
Query: 297 SGLVGASQSEE--LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECV 354
G G+SQ+ + +R+L P +G +IGK G TIK+I + + +++D+ K+N
Sbjct: 179 QGHGGSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIH-RKENSGAAE 237
Query: 355 ITVTAIESPDDIKSMAVEAVLLLQTKINDEDD--DTVTIRLLVSSKVIGCIIGKSGSIIN 412
VT +P+ S A +L + K DE + + +++L + ++G +IGK G +
Sbjct: 238 KPVTIHATPEGT-SEACRMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLK 296
Query: 413 EIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRD----DALKDR 468
+I T + IS + + + V G V + +A ++I+ +LR+ D L
Sbjct: 297 KIEHETGTKITISSLQDLSIYNP-ERTITVKGTVEACANAEIEIMKKLREAFENDMLAVN 355
Query: 469 DGSRNPP---VGADHIYSSGTGISMPPLLP-SIPPVGPLGYDQRADSGSGIGMLSSSSLY 524
+ P + A I+S+G + PP P PP P Y A + SG SSLY
Sbjct: 356 QQANLIPGLNLSALGIFSTGLSVLPPPSGPRGAPPAAP--YHPFA-THSGY----FSSLY 408
Query: 525 GYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISG 584
+ S P+ SY P + + +P AVG +IGK G+++ + + +G
Sbjct: 409 PHHQFS----PFPHHHSY--------PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAG 456
Query: 585 ATIEMSDSKS-SRGDRVALISGTPEQKRAAENLI 617
A+I+++ ++ +R+ +I+G PE + A+ I
Sbjct: 457 ASIKIAPAEGPDVSERMVIITGPPEAQFKAQGRI 490
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 100/458 (21%), Positives = 185/458 (40%), Gaps = 68/458 (14%)
Query: 9 RSQRDNDRDGKNQKRRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRA 68
S R+ G +Q R+I+ RIL P +G++IGK G I +I ++T++
Sbjct: 174 HSSREQGHGGSSQARQID----------FPLRILVPTQFVGAIIGKEGLTIKNITKQTQS 223
Query: 69 RVKVV-DPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVA 127
RV + GA ++ VTI++ E A +L++ A+
Sbjct: 224 RVDIHRKENSGAAEKPVTIHA---------------TPEGTSEACRMILEIMQKEAD--- 265
Query: 128 NATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTP-KDAS--EPT 184
+ K E+ +IL + +IGK G +K++ +T T I ++ +D S P
Sbjct: 266 -----ETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPE 320
Query: 185 HSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVP 244
+ ++ + E E +KK A M + + ++ P + + +
Sbjct: 321 RTITVKGTVEACANAEIEIMKKLREAFENDMLAVNQQANLI---------PGLNLSAL-- 369
Query: 245 IYPPGGLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQ 304
G++ +LP S P GA +A + S
Sbjct: 370 -----GIFSTGLSVLPPPSGPR--GAPPAAPYHPFATHSGYFSSLYPHHQFSPFPHHHSY 422
Query: 305 SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTK--DNRDECVITVTAIES 362
E+ ++ + P +G +IGK G IK + + +GA I + + D + VI I
Sbjct: 423 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVI----ITG 478
Query: 363 PDDIKSMA---VEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
P + + A + L + N +++ + + V S G +IGK G +NE++ T
Sbjct: 479 PPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTS 538
Query: 420 ADVRISKGDKPKCADANDE-LVEVVGEVGSVRDALVQI 456
A+V + + P D N+E +V ++G + + A +I
Sbjct: 539 AEVIVPRDQTP---DENEEVIVRIIGHFFASQTAQRKI 573
>gi|432934409|ref|XP_004081928.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Oryzias latipes]
Length = 600
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 160/327 (48%), Gaps = 32/327 (9%)
Query: 304 QSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESP 363
+ ++ +R+L P +G +IGK G TIK++ + + +++D+ K+N +T +P
Sbjct: 184 RQQDFPLRILVPTQFVGAIIGKEGLTIKNVTKQTQSKVDI-HRKENAGAAEKPITIHSTP 242
Query: 364 DDIKSMAVEAVLLLQTKIND-EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADV 422
+ S + ++Q + N+ + ++ + +++L + ++G +IGK G + +I + T +
Sbjct: 243 EGCSSACRMILDIMQKEANETKTNEEIPLKILAHNSLVGRLIGKEGRNLKKIEEETGTKI 302
Query: 423 RISK-GDKPKCADANDELVEVVGEVGSVRDALVQIILRLR-----DDALKDRDGSRNP-- 474
IS D C + + V G + + A V+I+ +L+ D A ++ + P
Sbjct: 303 TISSLQDLTICNP--ERTITVKGSLEACCKAEVEIMKKLKEAYENDIAAINQQANLIPGL 360
Query: 475 PVGADHIYSSGTGISMPPLLPS---IPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSM 531
+ A I+SSG + +PP S +PP+ P GY+ S + S LYG S
Sbjct: 361 NLNALGIFSSGLPV-LPPAAGSRGAVPPMPPAGYNPFLSHSSHL-----SGLYGVPPTSA 414
Query: 532 GDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSD 591
+ + +Y + +P AVG +IGK G ++ + +GA+I+++
Sbjct: 415 IPHQHSQQAPEQEVVY----------LFIPTQAVGALIGKKGQHIKQLAHFAGASIKIAP 464
Query: 592 SKSSR-GDRVALISGTPEQKRAAENLI 617
++S +R+ +I+GTPE + A+ I
Sbjct: 465 AESPDVTERMVIITGTPEAQFKAQGRI 491
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 109/468 (23%), Positives = 188/468 (40%), Gaps = 87/468 (18%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKEDVEV 98
RIL P +G++IGK G I ++ ++T+++V + GA ++ +TI+S
Sbjct: 191 RILVPTQFVGAIIGKEGLTIKNVTKQTQSKVDIHRKENAGAAEKPITIHS---------- 240
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
E +A +L + A N+ K E+ +IL +S +IGK
Sbjct: 241 -----TPEGCSSACRMILDIMQKEA--------NETKTNEEIPLKILAHNSLVGRLIGKE 287
Query: 159 GATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKF 218
G +K++ +T T I ++ + + C E + + G EA KA I + K
Sbjct: 288 GRNLKKIEEETGTKITIS---SLQDLTICNPE--RTITVKGSLEACCKAEVEIMKKL-KE 341
Query: 219 SPREDIPLETTVREAPPSI------IIPSDVPIYPP-GGLYPNADPILPSRSVPSILGAA 271
+ DI P + I S +P+ PP G P+ P+ P + ++
Sbjct: 342 AYENDIAAINQQANLIPGLNLNALGIFSSGLPVLPPAAGSRGAVPPMPPAGYNPFLSHSS 401
Query: 272 RVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIK 331
+ L G T S + E+ V+ + P +G +IGK G IK
Sbjct: 402 HLSGLYGVPPT-----------SAIPHQHSQQAPEQEVVYLFIPTQAVGALIGKKGQHIK 450
Query: 332 SIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAV-----EAVLLLQTKI----- 381
+ +GA I + ESPD + M + EA Q +I
Sbjct: 451 QLAHFAGASIK--------------IAPAESPDVTERMVIITGTPEAQFKAQGRIFGKLK 496
Query: 382 -----NDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADAN 436
+ +++ + + V S G +IGK G +NE++ T A+V + + P D N
Sbjct: 497 EENFFSAKEEVKLETHIKVPSSAAGRVIGKGGKTVNELQNLTSAEVIVPRDQIP---DEN 553
Query: 437 DE-LVEVVGEVGSVRDA---LVQIILRLRDDALKDRDGSRNPPVGADH 480
DE V++ G + + A + +II +++ K + G PP H
Sbjct: 554 DEVFVKISGHFFASQTAQRKIREIIQQVKQQEQKHQQG---PPESPHH 598
Score = 46.2 bits (108), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 79/200 (39%), Gaps = 32/200 (16%)
Query: 26 NEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDP-FPGAKDRVV 84
++ ++ E+ V+Y + P +G++IGK G+ I + A +K+ P +R+V
Sbjct: 417 HQHSQQAPEQEVVY-LFIPTQAVGALIGKKGQHIKQLAHFAGASIKIAPAESPDVTERMV 475
Query: 85 TIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQI 144
I +A K I + K + K E I
Sbjct: 476 II----------------------TGTPEAQFKAQGRIFGKLKEENFFSAKEEVKLETHI 513
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDN-FVLISGESEA 203
VPSS + +IGK G T+ L++ T + + P+D E D FV ISG A
Sbjct: 514 KVPSSAAGRVIGKGGKTVNELQNLTSAEV-IVPRD------QIPDENDEVFVKISGHFFA 566
Query: 204 VKKALFAISAIMYKFSPRED 223
+ A I I+ + +E
Sbjct: 567 SQTAQRKIREIIQQVKQQEQ 586
>gi|297734587|emb|CBI16638.3| unnamed protein product [Vitis vinifera]
Length = 346
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 155/337 (45%), Gaps = 76/337 (22%)
Query: 303 SQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIES 362
+++++++ R++ P +IG+VIGK G I+ IR+ + A I + D +E VI +++ +S
Sbjct: 55 AKNQDVLFRIVVPSRQIGKVIGKEGSRIQKIREETKATIKIADAIARHEERVIIISSKDS 114
Query: 363 PDDIKSMAVEAVLLLQTKINDEDDDTV-------------TIRLLVSSKVIGCIIGKSGS 409
+++ S A A+L + + I EDD IRLL++ GC+IG SG
Sbjct: 115 -ENVISDAENALLQVASLILKEDDSNTDALKVGVGHVVANAIRLLIAGSQAGCLIGMSGQ 173
Query: 410 IINEIRKRTKADVRISKGDK-PKCADAN--DELVEVVGEVGSVRDALVQIILRLRDDALK 466
I ++R + A + I ++ P CA A+ D +V++ G+V +V AL +I +LR+
Sbjct: 174 NIEKLRNSSGATITILPQNQLPLCASAHDSDRMVQISGDVPAVLKALEEIGCQLRE---- 229
Query: 467 DRDGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGY 526
NPP IS+ P+ Y+ + S + +S+ Y
Sbjct: 230 ------NPPRQV---------ISISPI-----------YNPNTNRTSQQYLDPASA--DY 261
Query: 527 GSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGAT 586
+L+M ++P VG +IG+ GSN++ IR SGA
Sbjct: 262 VTLNM---------------------------MIPETLVGGLIGRCGSNISRIRNESGAM 294
Query: 587 IEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFIMA 623
I++ K + R G+ +Q A+ + +I +
Sbjct: 295 IKVYGGKGEQNHRQIQFGGSAQQVALAKQRVDEYIYS 331
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 142/330 (43%), Gaps = 82/330 (24%)
Query: 17 DGKNQKRRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPF 76
D ++ KRR +D V++RI+ P IG VIGK G I IR+ET+A +K+ D
Sbjct: 47 DHRSPKRRAKNQD-------VLFRIVVPSRQIGKVIGKEGSRIQKIREETKATIKIADAI 99
Query: 77 PGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDK-- 134
++RV+ I S KD E+V D A++ALL+V + I + TD K
Sbjct: 100 ARHEERVIIISS--KDSENVISD-----------AENALLQVASLILKEDDSNTDALKVG 146
Query: 135 -KRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDN 193
++L+ SQ+ +IG +G I++LR+ + +I + P++ P + A + D
Sbjct: 147 VGHVVANAIRLLIAGSQAGCLIGMSGQNIEKLRNSSGATITILPQN-QLPLCASAHDSDR 205
Query: 194 FVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYP 253
V ISG+ AV KAL I +RE PP +I S PIY P
Sbjct: 206 MVQISGDVPAVLKALEEIGC---------------QLRENPPRQVI-SISPIYNP----- 244
Query: 254 NADPILPSRSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVL 313
+T T Y + + ++ + + ++
Sbjct: 245 ---------------------------NTNRTSQQY----------LDPASADYVTLNMM 267
Query: 314 CPFNKIGRVIGKGGGTIKSIRQASGAQIDV 343
P +G +IG+ G I IR SGA I V
Sbjct: 268 IPETLVGGLIGRCGSNISRIRNESGAMIKV 297
>gi|414868822|tpg|DAA47379.1| TPA: hypothetical protein ZEAMMB73_380288 [Zea mays]
Length = 499
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 96/182 (52%), Gaps = 18/182 (9%)
Query: 38 IYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVE 97
++RIL P +G+VIG+ G I + +E+RAR+KV++ P +R V I + KD+ D E
Sbjct: 108 VFRILVPTTKVGAVIGRKGDFIKKMCEESRARIKVLEGPPAVPERAVMISA--KDEPDTE 165
Query: 98 VDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRK-EKEECQILVPSSQSANIIG 156
L A D LL+VH I + + TD ++ ++LVP+SQ+ ++IG
Sbjct: 166 ----------LPPAVDGLLRVHRRITDGLETETDQPQRATVNTGPTRLLVPASQAGSLIG 215
Query: 157 KAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMY 216
K GATIK ++ ++ +++ E A+ D V I GE KA+ I++ +
Sbjct: 216 KQGATIKSIQDASKCVLRIV-----ENVPPVALNDDRVVEIQGEPHDSHKAVELIASHLR 270
Query: 217 KF 218
KF
Sbjct: 271 KF 272
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 82/166 (49%), Gaps = 12/166 (7%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
E V R+L P K+G VIG+ G IK + + S A+I V + E + ++A + PD
Sbjct: 106 ESVFRILVPTTKVGAVIGRKGDFIKKMCEESRARIKVLEGPPAVPERAVMISAKDEPDTE 165
Query: 367 KSMAVEAVLLLQTKIND----EDD-------DTVTIRLLVSSKVIGCIIGKSGSIINEIR 415
AV+ +L + +I D E D +T RLLV + G +IGK G+ I I+
Sbjct: 166 LPPAVDGLLRVHRRITDGLETETDQPQRATVNTGPTRLLVPASQAGSLIGKQGATIKSIQ 225
Query: 416 KRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLR 461
+K +RI + + P A +D +VE+ GE A+ I LR
Sbjct: 226 DASKCVLRIVE-NVPPVALNDDRVVEIQGEPHDSHKAVELIASHLR 270
>gi|356535513|ref|XP_003536289.1| PREDICTED: RNA-binding protein Nova-1-like [Glycine max]
Length = 337
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 147/328 (44%), Gaps = 48/328 (14%)
Query: 303 SQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD----NRDECVITVT 358
S+ + IR L + G VIGKGG TI + SGA+I + + D ++
Sbjct: 31 SEEKPTYIRFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSRNHEFFPGTTDRIIMVSG 90
Query: 359 AIESPDDIKSMAVEAVL-LLQTKINDEDDD----TVTIRLLVSSKVIGCIIGKSGSIINE 413
AI ++I+ AVE +L L ++++ EDD+ +RL+V + G IIGK G+ I
Sbjct: 91 AI---NEIQ-RAVELILSKLLSELHSEDDNDAEPKTKVRLVVPNGSCGGIIGKGGATIRS 146
Query: 414 IRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRN 473
+ ++A ++IS D ND LV + G A+ I+ +L +D + S N
Sbjct: 147 FIEDSQAGIKISPQDN-NYYGQNDRLVTLTGSFDEQMRAIELIVSKLSEDPHYAQ--SMN 203
Query: 474 PPVGADHIYSSG-TGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMG 532
P +Y SG G+ +LPS+ P + R + +G G L +S SL+MG
Sbjct: 204 SPFSYPGVYFSGYQGVPYTYVLPSVAPPAYNAVNYRPNGAAG-GKLQNSKEERSNSLTMG 262
Query: 533 DSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDS 592
V +G V+G+ G N+ I + SGA I++SD
Sbjct: 263 ---------------------------VADEHIGLVVGRGGRNIMEISQASGARIKISDR 295
Query: 593 K---SSRGDRVALISGTPEQKRAAENLI 617
S DR I+G+ R AE++I
Sbjct: 296 GDYVSGTTDRKVTITGSQRAIRTAESMI 323
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 137/320 (42%), Gaps = 57/320 (17%)
Query: 33 NEESVIY-RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV---DPFPGAKDRVVTIYS 88
+EE Y R L + GSVIGK G I + ++ AR+++ + FPG DR++ +
Sbjct: 31 SEEKPTYIRFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSRNHEFFPGTTDRIIMVSG 90
Query: 89 HVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPS 148
+ + Q A+ + + + + + + DND + K K +++VP+
Sbjct: 91 AINE------------------IQRAVELILSKLLSELHSEDDNDAEPKTK--VRLVVPN 130
Query: 149 SQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKAL 208
IIGK GATI+ ++ IK++P+D ++ + D V ++G + + +
Sbjct: 131 GSCGGIIGKGGATIRSFIEDSQAGIKISPQD-----NNYYGQNDRLVTLTG---SFDEQM 182
Query: 209 FAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSIL 268
AI I+ K S ED P + P PG + + + +PS+
Sbjct: 183 RAIELIVSKLS--ED-----------PHYAQSMNSPFSYPGVYFSGYQGVPYTYVLPSVA 229
Query: 269 GAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGG 328
A + N P + G L + +S L + V IG V+G+GG
Sbjct: 230 PPAY--------NAVNYRPNGAAGGKLQNS--KEERSNSLTMGVAD--EHIGLVVGRGGR 277
Query: 329 TIKSIRQASGAQIDVDDTKD 348
I I QASGA+I + D D
Sbjct: 278 NIMEISQASGARIKISDRGD 297
Score = 42.4 bits (98), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 383 DEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEV 442
D ++ IR LVS+ G +IGK GS I + + ++ A +++S+ + D ++ V
Sbjct: 30 DSEEKPTYIRFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSR-NHEFFPGTTDRIIMV 88
Query: 443 VGEVGSVRDALVQIILRLRDDALKDRDGSRNP 474
G + ++ A+ I+ +L + + D P
Sbjct: 89 SGAINEIQRAVELILSKLLSELHSEDDNDAEP 120
Score = 38.9 bits (89), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Query: 553 PLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS---SRGDRVALISGT-PE 608
P + LV +A G VIGK GS + + + SGA I++S + DR+ ++SG E
Sbjct: 35 PTYIRFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSRNHEFFPGTTDRIIMVSGAINE 94
Query: 609 QKRAAENLIQAFI 621
+RA E ++ +
Sbjct: 95 IQRAVELILSKLL 107
>gi|255541092|ref|XP_002511610.1| conserved hypothetical protein [Ricinus communis]
gi|223548790|gb|EEF50279.1| conserved hypothetical protein [Ricinus communis]
Length = 363
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 87/338 (25%), Positives = 148/338 (43%), Gaps = 77/338 (22%)
Query: 303 SQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIES 362
+++++++ R++ P +IG+VIGK G I+ IR+ + A I + D +E VI +++ ES
Sbjct: 66 AKAQDVIFRIVVPSRQIGKVIGKVGCRIQKIREETKATIKIADAIARHEERVIIISSKES 125
Query: 363 PDDIKSMAVEAVLLLQTKINDEDDDTV--------------TIRLLVSSKVIGCIIGKSG 408
D + S A A+ + T I ED+ TIRLL++ G +IG SG
Sbjct: 126 -DCVVSDAENALKKIATLILKEDESPAESSKVVGAGHLGANTIRLLIAGSQAGSLIGVSG 184
Query: 409 SIINEIRKRTKADVRISKGDK-PKCADAN--DELVEVVGEVGSVRDALVQIILRLRDDAL 465
I ++R + A + + ++ P CA A+ D +V++ G+V V A+ +I +LR+
Sbjct: 185 QNIEKLRNSSGATITVLAPNQLPLCASAHESDRVVQISGDVPVVLKAVEEIGCQLRE--- 241
Query: 466 KDRDGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYG 525
NPP + S + + P+ P V P D
Sbjct: 242 -------NPP---KQVISISPTYNYATVRPTQPYVDPTSADY------------------ 273
Query: 526 YGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGA 585
+TLE++V VG +IG+ GSN++ IR SGA
Sbjct: 274 ----------------------------VTLEMMVSETLVGGLIGRCGSNISRIRNESGA 305
Query: 586 TIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFIMA 623
I++ K + R GT +Q A+ + +I +
Sbjct: 306 MIKVYGGKGEKKHRHIQFGGTAQQVALAKQRVDEYIYS 343
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 106/226 (46%), Gaps = 28/226 (12%)
Query: 22 KRRINEKD----------EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVK 71
KRR +E D ++ + VI+RI+ P IG VIGK G I IR+ET+A +K
Sbjct: 46 KRRRDEFDVADEPEGSAAKRAKAQDVIFRIVVPSRQIGKVIGKVGCRIQKIREETKATIK 105
Query: 72 VVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATD 131
+ D ++RV+ I S + D V D A++AL K+ I + +
Sbjct: 106 IADAIARHEERVIIISS---KESDCVVSD----------AENALKKIATLILKEDESPAE 152
Query: 132 NDK----KRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSC 187
+ K ++L+ SQ+ ++IG +G I++LR+ + +I V + P +
Sbjct: 153 SSKVVGAGHLGANTIRLLIAGSQAGSLIGVSGQNIEKLRNSSGATITVLAPN-QLPLCAS 211
Query: 188 AMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREA 233
A E D V ISG+ V KA+ I + + P++ I + T A
Sbjct: 212 AHESDRVVQISGDVPVVLKAVEEIGCQLRENPPKQVISISPTYNYA 257
>gi|356530338|ref|XP_003533739.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 443
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 96/343 (27%), Positives = 162/343 (47%), Gaps = 40/343 (11%)
Query: 309 VIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKS 368
V R++ P K+G +IG+ G IK + + + ++I V D + ++ V+ E P+ S
Sbjct: 54 VFRLIVPVGKVGSIIGRKGELIKKMCEETRSRIRVLDAPLGTPDRIVLVSGKEDPEAALS 113
Query: 369 MAVEAVLLLQTKI------NDEDDDTV------TIRLLVSSKVIGCIIGKSGSIINEIRK 416
A++AV+ + ++ + E+ ++ +IRLLV+S +IGK GS+I I++
Sbjct: 114 PAMDAVVRIFKRVSGFSETDAENQESAAGLAFSSIRLLVASTQAINLIGKQGSLIKSIQE 173
Query: 417 RTKADVRISKGDKPKC-ADANDELVEVVGEVGSVRDALVQIILRLR-----DDALKDRDG 470
T A VR+ GD+ + A AN+ +VE+ GE V AL ++ LR L +
Sbjct: 174 NTSASVRVLSGDEVQFYATANERIVEIQGEALKVLKALEAVVGHLRKFLVDHSVLPLFEK 233
Query: 471 SRNPPVGADHIYSSGTGISM--PPLLPSIPPVGPLGYDQ---RADSGSGIGML---SSSS 522
+ N P D + + S+ SI PL + AD S + + S+ S
Sbjct: 234 TYNAPTSQDRQAETWSDKSLLHTSSRTSIFADIPLSTKRDSVLADRESQLDLFLPSSTMS 293
Query: 523 LYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVL----VPANAVGKVIGKAGSNLAN 578
LYG S S+S S G + P+ V+ +P + +IG G+N+
Sbjct: 294 LYGQDS---------SLSGVHSSALGRVGAPIVTTVIQTMQIPLSYAEDIIGIQGTNIEY 344
Query: 579 IRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFI 621
IR+ SGA + + +S+ + V I GT + + A+ LIQ I
Sbjct: 345 IRRTSGAILTVQESRVP-DEIVVEIKGTSSEVQTAQQLIQDVI 386
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 98/362 (27%), Positives = 158/362 (43%), Gaps = 57/362 (15%)
Query: 27 EKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTI 86
EK G ++R++ P G +GS+IG+ G++I + +ETR+R++V+D G DR+V
Sbjct: 43 EKRWPGWPGDCVFRLIVPVGKVGSIIGRKGELIKKMCEETRSRIRVLDAPLGTPDRIVL- 101
Query: 87 YSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEK------E 140
V KED E L A DA+++ I V+ ++ D + +E
Sbjct: 102 ---VSGKEDPEA--------ALSPAMDAVVR----IFKRVSGFSETDAENQESAAGLAFS 146
Query: 141 ECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGE 200
++LV S+Q+ N+IGK G+ IK ++ T S++V D A + V I GE
Sbjct: 147 SIRLLVASTQAINLIGKQGSLIKSIQENTSASVRVLSGDE---VQFYATANERIVEIQGE 203
Query: 201 SEAVKKALFAISAIMYKFSPREDI-PLETTVREAPPS-------------IIIPSDVPIY 246
+ V KAL A+ + KF + PL AP S + S I+
Sbjct: 204 ALKVLKALEAVVGHLRKFLVDHSVLPLFEKTYNAPTSQDRQAETWSDKSLLHTSSRTSIF 263
Query: 247 PPGGLYPNADPILPSRS------VPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLV 300
L D +L R +PS + Y + V+S+ L G V
Sbjct: 264 ADIPLSTKRDSVLADRESQLDLFLPS-------STMSLYGQDSSLSGVHSSAL----GRV 312
Query: 301 GASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAI 360
GA ++ + P + +IG G I+ IR+ SGA + V +++ DE V+ +
Sbjct: 313 GAPIVTTVIQTMQIPLSYAEDIIGIQGTNIEYIRRTSGAILTVQESRVP-DEIVVEIKGT 371
Query: 361 ES 362
S
Sbjct: 372 SS 373
>gi|357117002|ref|XP_003560265.1| PREDICTED: uncharacterized protein LOC100827626 [Brachypodium
distachyon]
Length = 656
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 117/458 (25%), Positives = 197/458 (43%), Gaps = 74/458 (16%)
Query: 37 VIYRILCPDGVIGSVIGKSGKVINSIRQET---RARVKVVDPFP-GAKDRVVTIYSHVKD 92
V++R+L P + V+ +R+ T RV ++ +P A RV +
Sbjct: 38 VVFRLLLPRAFGDEDAMRLYAVVAPLRRHTAGLHVRVDALEGYPEDAASRVAVVLGPTSP 97
Query: 93 KEDVEVDDEFNDKEPL--CAAQDALLKV-------HAAIANAVANATDNDKKRKEKEECQ 143
VE + EPL AQ+AL+ V H +A A E C
Sbjct: 98 TRPVEASSS-SSGEPLQLSPAQEALVSVVDVGGVLHRVVARA-----------PEFVSCL 145
Query: 144 ILVPSSQSANIIGKAGATIKRLRSKTRTSIKVT--PKDASEPTHSCAMEFDNFVLISGES 201
+LV ++A + T++ + S+T ++VT + A+ HS + I+G+
Sbjct: 146 VLV---EAAGLEALGRGTLEAIASETNAELRVTSLAEGATPSVHSP----KEVIEITGDR 198
Query: 202 EAVKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIP---SDVPIYPPGGLYPNADPI 258
++KA+ A+S+ Y L T+V PS + P S+VP G L+
Sbjct: 199 TTIRKAIVALSS--YLQGDLHACSLTTSV--TTPSPMFPWKSSEVPEPNYGDLHSGVSTK 254
Query: 259 LPSRSVPSILGAARVP-DLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFN 317
+ +VP I P D+ G +T N +++ R+LC N
Sbjct: 255 CANINVPWI----DCPQDVAGNVETENL--------------------QQISFRLLCHVN 290
Query: 318 KIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVLLL 377
G +IGK G IK +GA IDV + E VIT++A+ESP S A+L +
Sbjct: 291 LAGGLIGKKGMIIKGFETETGASIDVGNPFSGCMERVITISALESPGK-HSKVQSAILCI 349
Query: 378 QTKINDEDDDTV------TIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRI-SKGDKP 430
++ + + + + + R+LV ++G G+II E+ K T A + I + D P
Sbjct: 350 FDRMEEVERNLMFGKPECSARVLVPKSQFSSLVGLGGAIIKEMVKSTGARIEILDEMDVP 409
Query: 431 KCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDR 468
CA + ++++ G + +VRDAL + +LR+ A +
Sbjct: 410 ACASNCERVLQITGNLVNVRDALFVVSEKLRNHAFSSK 447
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 90/194 (46%), Gaps = 22/194 (11%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH 89
E N + + +R+LC + G +IGK G +I ET A + V +PF G +RV+TI +
Sbjct: 274 ETENLQQISFRLLCHVNLAGGLIGKKGMIIKGFETETGASIDVGNPFSGCMERVITISAL 333
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSS 149
+ +V Q A+L I + + N K + ++LVP S
Sbjct: 334 ESPGKHSKV-------------QSAIL----CIFDRMEEVERNLMFGKPECSARVLVPKS 376
Query: 150 QSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALF 209
Q ++++G GA IK + T I++ + P +CA + + I+G V+ ALF
Sbjct: 377 QFSSLVGLGGAIIKEMVKSTGARIEIL-DEMDVP--ACASNCERVLQITGNLVNVRDALF 433
Query: 210 AISAIM--YKFSPR 221
+S + + FS +
Sbjct: 434 VVSEKLRNHAFSSK 447
>gi|357157425|ref|XP_003577794.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 527
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 100/182 (54%), Gaps = 18/182 (9%)
Query: 38 IYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVE 97
++R+L P +G+VIG+ G+ I + +E+RAR+K++D PG +R V I + KD+ D
Sbjct: 127 VFRVLVPVQKVGAVIGRKGEFIKKMCEESRARIKILDGPPGVPERAVMISA--KDEPDAL 184
Query: 98 VDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEK-EECQILVPSSQSANIIG 156
V A D LL+VH I + + + TD ++ ++LVP+SQ+ ++IG
Sbjct: 185 V----------SPAVDGLLRVHKRITDGLDSETDQPQRGAGPVGPTRLLVPASQAGSLIG 234
Query: 157 KAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMY 216
K GATIK ++ ++ ++++ E A+ D V I GE V KA+ I++ +
Sbjct: 235 KQGATIKSIQDASKCALRIL-----ENVPPVALNDDRVVEIQGEPLDVHKAVELIASHLR 289
Query: 217 KF 218
KF
Sbjct: 290 KF 291
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 96/219 (43%), Gaps = 29/219 (13%)
Query: 256 DPILPSRSVPSIL--GAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVL 313
D +PS P+ + G A L WP G G S V RVL
Sbjct: 87 DQAIPSHEAPADVDGGEAEAEQLANVETEDKKWP----------GWPGES-----VFRVL 131
Query: 314 CPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEA 373
P K+G VIG+ G IK + + S A+I + D E + ++A + PD + S AV+
Sbjct: 132 VPVQKVGAVIGRKGEFIKKMCEESRARIKILDGPPGVPERAVMISAKDEPDALVSPAVDG 191
Query: 374 VLLLQTKINDEDDDTV-----------TIRLLVSSKVIGCIIGKSGSIINEIRKRTKADV 422
+L + +I D D RLLV + G +IGK G+ I I+ +K +
Sbjct: 192 LLRVHKRITDGLDSETDQPQRGAGPVGPTRLLVPASQAGSLIGKQGATIKSIQDASKCAL 251
Query: 423 RISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLR 461
RI + + P A +D +VE+ GE V A+ I LR
Sbjct: 252 RILE-NVPPVALNDDRVVEIQGEPLDVHKAVELIASHLR 289
>gi|223947189|gb|ACN27678.1| unknown [Zea mays]
gi|223950255|gb|ACN29211.1| unknown [Zea mays]
gi|414868821|tpg|DAA47378.1| TPA: KH domain containing protein [Zea mays]
Length = 508
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 96/182 (52%), Gaps = 18/182 (9%)
Query: 38 IYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVE 97
++RIL P +G+VIG+ G I + +E+RAR+KV++ P +R V I + KD+ D E
Sbjct: 108 VFRILVPTTKVGAVIGRKGDFIKKMCEESRARIKVLEGPPAVPERAVMISA--KDEPDTE 165
Query: 98 VDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRK-EKEECQILVPSSQSANIIG 156
L A D LL+VH I + + TD ++ ++LVP+SQ+ ++IG
Sbjct: 166 ----------LPPAVDGLLRVHRRITDGLETETDQPQRATVNTGPTRLLVPASQAGSLIG 215
Query: 157 KAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMY 216
K GATIK ++ ++ +++ E A+ D V I GE KA+ I++ +
Sbjct: 216 KQGATIKSIQDASKCVLRIV-----ENVPPVALNDDRVVEIQGEPHDSHKAVELIASHLR 270
Query: 217 KF 218
KF
Sbjct: 271 KF 272
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 82/166 (49%), Gaps = 12/166 (7%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
E V R+L P K+G VIG+ G IK + + S A+I V + E + ++A + PD
Sbjct: 106 ESVFRILVPTTKVGAVIGRKGDFIKKMCEESRARIKVLEGPPAVPERAVMISAKDEPDTE 165
Query: 367 KSMAVEAVLLLQTKIND----EDD-------DTVTIRLLVSSKVIGCIIGKSGSIINEIR 415
AV+ +L + +I D E D +T RLLV + G +IGK G+ I I+
Sbjct: 166 LPPAVDGLLRVHRRITDGLETETDQPQRATVNTGPTRLLVPASQAGSLIGKQGATIKSIQ 225
Query: 416 KRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLR 461
+K +RI + + P A +D +VE+ GE A+ I LR
Sbjct: 226 DASKCVLRIVE-NVPPVALNDDRVVEIQGEPHDSHKAVELIASHLR 270
>gi|224121400|ref|XP_002330818.1| predicted protein [Populus trichocarpa]
gi|222872620|gb|EEF09751.1| predicted protein [Populus trichocarpa]
Length = 405
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 158/343 (46%), Gaps = 30/343 (8%)
Query: 309 VIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKS 368
V R++ P +K+G +IG+ G +K + + A+I + + + ++ ++ E P+ +S
Sbjct: 12 VFRLIVPLSKVGSIIGRRGELVKKMCDETRARIRILEGPLGISDRIVLISGKEEPEAPQS 71
Query: 369 MAVEAVLLLQTKIND----EDDDT-----------VTIRLLVSSKVIGCIIGKSGSIINE 413
A++AV+ + +++ E D+T +IRLLV+S +IGK GSII
Sbjct: 72 PAMDAVMRVFKRVSGLSPGEGDNTGSAAAAAGSAFCSIRLLVASSQAINLIGKQGSIIKS 131
Query: 414 IRKRTKADVRISKGDK-PKCADANDELVEVVGEVGSVRDALVQIILRLR-----DDALKD 467
I++ T A V + D+ P A +++ +VE+ GE V AL +I +LR +
Sbjct: 132 IQENTGAAVHVMAEDELPSYATSDERIVEIHGEAMKVFKALEAVIGQLRKFLVDHSVIPI 191
Query: 468 RDGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGY--DQRADSGSGIGMLSSSSLYG 525
+ + N + + + I+ P L + P P G D + + +
Sbjct: 192 FEKTYNATISQECPADARPDIAQPSLHSAYVPTIPSGIASDYSLSFKRDPSIYEHETQFE 251
Query: 526 YGSLSMGDSPYGS---MSSYSSKLYGGLPPPLTLEVL----VPANAVGKVIGKAGSNLAN 578
+ G S YG + + S G P+ +V VP + +IG AGSN+A
Sbjct: 252 HKISQPGLSIYGQDPGIVGFRSTGLGRAAAPIVTQVTQTMQVPLSYAEDIIGVAGSNIAY 311
Query: 579 IRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFI 621
IR+ S A + + +S+ + I GT Q + A+ LIQ FI
Sbjct: 312 IRRTSRAILSIQESRGLPDEITVEIKGTGAQVQMAQQLIQEFI 354
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 154/349 (44%), Gaps = 53/349 (15%)
Query: 38 IYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVE 97
++R++ P +GS+IG+ G+++ + ETRAR+++++ G DR+V I KE+ E
Sbjct: 12 VFRLIVPLSKVGSIIGRRGELVKKMCDETRARIRILEGPLGISDRIVLI----SGKEEPE 67
Query: 98 VDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEE---CQI--LVPSSQSA 152
P A DA+++V ++ DN C I LV SSQ+
Sbjct: 68 A--------PQSPAMDAVMRVFKRVSGLSPGEGDNTGSAAAAAGSAFCSIRLLVASSQAI 119
Query: 153 NIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAIS 212
N+IGK G+ IK ++ T ++ V +D P+++ + E V I GE+ V KAL A+
Sbjct: 120 NLIGKQGSIIKSIQENTGAAVHVMAED-ELPSYATSDE--RIVEIHGEAMKVFKALEAVI 176
Query: 213 AIMYKFSPRED-IPLETTVREAPPSIIIPSDVPIYPPGGLYPN-ADPILPSRSVPSI--- 267
+ KF IP+ A S P+D P+ A P L S VP+I
Sbjct: 177 GQLRKFLVDHSVIPIFEKTYNATISQECPADA--------RPDIAQPSLHSAYVPTIPSG 228
Query: 268 ------LGAARVPDLQGYADTGNTWPVYSTGLSLVS---GLVGASQS----------EEL 308
L R P + + +T + GLS+ G+VG + ++
Sbjct: 229 IASDYSLSFKRDPSIYEH-ETQFEHKISQPGLSIYGQDPGIVGFRSTGLGRAAAPIVTQV 287
Query: 309 VIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITV 357
+ P + +IG G I IR+ S A + + +++ DE + +
Sbjct: 288 TQTMQVPLSYAEDIIGVAGSNIAYIRRTSRAILSIQESRGLPDEITVEI 336
>gi|396482778|ref|XP_003841545.1| similar to KH domain RNA binding protein [Leptosphaeria maculans
JN3]
gi|312218120|emb|CBX98066.1| similar to KH domain RNA binding protein [Leptosphaeria maculans
JN3]
Length = 488
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 97/371 (26%), Positives = 171/371 (46%), Gaps = 74/371 (19%)
Query: 304 QSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESP 363
++ L +R ++ +IGKGG + IR+ SGA+ V D E ++TV+
Sbjct: 124 ETNWLHVRACIGTSEAATIIGKGGENVTQIRRLSGAKCTVSDYSRGAVERILTVSG---- 179
Query: 364 DDIKSMAVEAVLLLQTKINDEDDDTVT--------IRLLVSSKVIGCIIGKSGSIINEIR 415
+ +++ L+++T +N ED +T + +RLL+ +IG IIGK+G I EI+
Sbjct: 180 -QVDAVSKAFGLIVRT-LNQEDLETPSTSTSKAYPMRLLIPHILIGSIIGKAGVRIREIQ 237
Query: 416 KRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPP 475
+ + A + S P ++ + + V+G +V A+ + L + L +R G P
Sbjct: 238 EASNAKLNASDTLLP---NSGERSLVVLGVADAVHIAVYYVAQTLVEQ-LTERFGG---P 290
Query: 476 VGADHIYSSGT-------GISMPPLLPSIPPVG-----PLGY----DQRADSGSGIGMLS 519
+ + SG G+S+ P +P P G P + QR + G G
Sbjct: 291 AASQYATRSGMAANVVPGGMSVQPYVPQ--PAGGQYSHPQNFRREPTQRTPAHGGYGAAH 348
Query: 520 -------SSSLYG-----YGSLSMGDSPYGSMSSYSSKLYGG------------------ 549
S YG YG+ S G +PYG ++ +S YGG
Sbjct: 349 MHGGQPPQPSPYGHPNMPYGAGSPGRAPYGGPAAPTS--YGGHHAAAPVAHGSTPMQPAV 406
Query: 550 --LP-PPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGT 606
+P PLT ++ +P + VG +IGK G+ + IR++SG+ I++++ + +R+ I+GT
Sbjct: 407 GSMPGQPLTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSMIKINEPTDNSNERLVTITGT 466
Query: 607 PEQKRAAENLI 617
E + A ++
Sbjct: 467 QECNQMALYML 477
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 79/380 (20%), Positives = 153/380 (40%), Gaps = 81/380 (21%)
Query: 50 SVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLC 109
++IGK G+ + IR+ + A+ V D GA +R++T+ V
Sbjct: 141 TIIGKGGENVTQIRRLSGAKCTVSDYSRGAVERILTVSGQV------------------- 181
Query: 110 AAQDALLKVHAAIANAVANATDNDKKRKEKEEC---QILVPSSQSANIIGKAGATIKRLR 166
DA+ K I + N D + + ++L+P +IIGKAG I+ ++
Sbjct: 182 ---DAVSKAFGLIVRTL-NQEDLETPSTSTSKAYPMRLLIPHILIGSIIGKAGVRIREIQ 237
Query: 167 SKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAIS-AIMYKFSPREDIP 225
+ K+ D P + +++ G ++AV A++ ++ ++ + + R P
Sbjct: 238 EASNA--KLNASDTLLPNSG-----ERSLVVLGVADAVHIAVYYVAQTLVEQLTERFGGP 290
Query: 226 L--ETTVREAPPSIIIPSDVPIYP-----PGGLYPNADPIL--PSRSVPSI--LGAARV- 273
+ R + ++P + + P GG Y + P++ P+ GAA +
Sbjct: 291 AASQYATRSGMAANVVPGGMSVQPYVPQPAGGQYSHPQNFRREPTQRTPAHGGYGAAHMH 350
Query: 274 ----PDLQGYADTGNTWPVYSTGLSLVSG-------------------------LVGASQ 304
P Y + S G + G VG+
Sbjct: 351 GGQPPQPSPYGHPNMPYGAGSPGRAPYGGPAAPTSYGGHHAAAPVAHGSTPMQPAVGSMP 410
Query: 305 SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPD 364
+ L ++ P + +G +IGKGG I IRQ SG+ I +++ DN +E ++T+T + +
Sbjct: 411 GQPLTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSMIKINEPTDNSNERLVTITGTQECN 470
Query: 365 DIKSMAVEAVLLLQTKINDE 384
+ A+ +L +++ E
Sbjct: 471 QM------ALYMLYSRLESE 484
Score = 42.0 bits (97), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 34/52 (65%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTI 86
+ + +I P+ ++G++IGK G IN IRQ + + +K+ +P + +R+VTI
Sbjct: 412 QPLTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSMIKINEPTDNSNERLVTI 463
>gi|226494805|ref|NP_001148654.1| KH domain containing protein [Zea mays]
gi|195621126|gb|ACG32393.1| KH domain containing protein [Zea mays]
Length = 529
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 96/182 (52%), Gaps = 18/182 (9%)
Query: 38 IYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVE 97
++RIL P +G+VIG+ G I + +E+RAR+KV++ P +R V I + KD+ D E
Sbjct: 108 VFRILVPTTKVGAVIGRKGDFIKKMCEESRARIKVLEGPPAVPERAVMISA--KDEPDTE 165
Query: 98 VDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRK-EKEECQILVPSSQSANIIG 156
L A D LL+VH I + + TD ++ ++LVP+SQ+ ++IG
Sbjct: 166 ----------LPPAVDGLLRVHRRITDGLETETDQPQRATVNTGPTRLLVPASQAGSLIG 215
Query: 157 KAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMY 216
K GATIK ++ ++ +++ E A+ D V I GE KA+ I++ +
Sbjct: 216 KQGATIKSIQDASKCVLRIV-----ENVPPVALNDDRVVEIQGEPHDSHKAVELIASHLR 270
Query: 217 KF 218
KF
Sbjct: 271 KF 272
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 82/166 (49%), Gaps = 12/166 (7%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
E V R+L P K+G VIG+ G IK + + S A+I V + E + ++A + PD
Sbjct: 106 ESVFRILVPTTKVGAVIGRKGDFIKKMCEESRARIKVLEGPPAVPERAVMISAKDEPDTE 165
Query: 367 KSMAVEAVLLLQTKIND----EDD-------DTVTIRLLVSSKVIGCIIGKSGSIINEIR 415
AV+ +L + +I D E D +T RLLV + G +IGK G+ I I+
Sbjct: 166 LPPAVDGLLRVHRRITDGLETETDQPQRATVNTGPTRLLVPASQAGSLIGKQGATIKSIQ 225
Query: 416 KRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLR 461
+K +RI + + P A +D +VE+ GE A+ I LR
Sbjct: 226 DASKCVLRIVE-NVPPVALNDDRVVEIQGEPHDSHKAVELIASHLR 270
>gi|449463577|ref|XP_004149510.1| PREDICTED: LOW QUALITY PROTEIN: poly(rC)-binding protein 3-like
[Cucumis sativus]
Length = 468
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 153/339 (45%), Gaps = 37/339 (10%)
Query: 38 IYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVE 97
++R++ P +GS+IG+ G +I + +ETRAR++V+D G DRVV I KE++E
Sbjct: 82 VFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRVVLI----SGKEELE 137
Query: 98 VDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGK 157
PL A DA+++V ++ N D+ + ++LV S+Q+ N+IGK
Sbjct: 138 --------SPLSPAMDAVIRVFKRVSGLSEN---EDEAKASFCSIRLLVASTQAINLIGK 186
Query: 158 AGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYK 217
G+ IK ++ T S++V D P ++ A E V + GES V KAL + + K
Sbjct: 187 QGSLIKSIQESTGASVRVLSGD-EMPFYAGADE--RMVELQGESLKVLKALEGVVGHLRK 243
Query: 218 FSPREDI-PLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDL 276
F + PL P S ++ L + I+ + PS + D
Sbjct: 244 FLVDHSVLPLFEKSFNTPASQDRQTET-WADKSSLLTASQSIISAEYAPSTKRESLFLDR 302
Query: 277 QGYADTGNTWPVYSTGLSLVS-------------GLVGASQSEELVIRVLCPFNKIGRVI 323
+ + D+ + S+G+SL G G ++ + P + +I
Sbjct: 303 EAHFDSH----ISSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDII 358
Query: 324 GKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIES 362
G GG I IR+ SGA + + +++ DE + + S
Sbjct: 359 GVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSS 397
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 97/339 (28%), Positives = 159/339 (46%), Gaps = 32/339 (9%)
Query: 309 VIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKS 368
V R++ P K+G +IG+ G IK + + + A+I V D + V+ ++ E + S
Sbjct: 82 VFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRVVLISGKEELESPLS 141
Query: 369 MAVEAVLLLQTKIN--DEDDDTV-----TIRLLVSSKVIGCIIGKSGSIINEIRKRTKAD 421
A++AV+ + +++ E++D +IRLLV+S +IGK GS+I I++ T A
Sbjct: 142 PAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQAINLIGKQGSLIKSIQESTGAS 201
Query: 422 VRISKGDK-PKCADANDELVEVVGEVGSVRDALVQIILRLR-----DDALKDRDGSRNPP 475
VR+ GD+ P A A++ +VE+ GE V AL ++ LR L + S N P
Sbjct: 202 VRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKFLVDHSVLPLFEKSFNTP 261
Query: 476 VGADH----------IYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYG 525
D + ++ I PS L D+ A S I SSS +
Sbjct: 262 ASQDRQTETWADKSSLLTASQSIISAEYAPSTKRES-LFLDREAHFDSHI---SSSGISL 317
Query: 526 YGSLSMGDSPYGSMSSYSSKLYGG-LPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISG 584
YG D ++ S GG + +T + +P + +IG G+N+A IR+ SG
Sbjct: 318 YGQ----DRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSG 373
Query: 585 ATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFIMA 623
A + + +S+ + I GT Q + A+ LIQ + A
Sbjct: 374 AILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVNA 412
>gi|390458234|ref|XP_003732080.1| PREDICTED: poly(rC)-binding protein 1-like [Callithrix jacchus]
Length = 349
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 159/347 (45%), Gaps = 50/347 (14%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
L IR+L ++G +IGK G ++K IR+ SGA+I++ + N E +IT+T P +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIITLTG---PTNAI 68
Query: 368 SMAVEAVL-LLQTKINDEDDDT-------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
A ++ L+ IN ++ VT+RL+V + G +IGK G I EIRK T
Sbjct: 69 FKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRKSTG 128
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGS-------- 471
A V+++ P ++ ++ + + G SV + + QI L + + + G
Sbjct: 129 AQVQVAGDMLP---NSTEQAITIAGMPQSVTECVKQICLVMLETISQSPQGRVMTIPYQP 185
Query: 472 --RNPPV---GADHIYSSGTG-------ISMPPL-------LPSIPPVGPLGYDQRADSG 512
+ PV G YS+ G + PPL +I P+ +Q A
Sbjct: 186 MPASSPVICAGGQDRYSNTAGYPHATHDLEGPPLDAYSIQGQHTISPLHLANLNQVARQQ 245
Query: 513 SGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKA 572
S M+ + G+ + DS + Y + L T E+ +P N +G +IG+
Sbjct: 246 SHFAMMHGGT--GFAGI---DSNSPEVKGYWASLDASTQ--TTHELTIPNNLIGCIIGRQ 298
Query: 573 GSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQA 619
G+N+ IR++SGA I++++ R I+G+ A+ LI A
Sbjct: 299 GTNINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLINA 345
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 78/361 (21%), Positives = 143/361 (39%), Gaps = 69/361 (19%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH 89
E G ++ R+L +GS+IGK G+ + IR+E+ AR+ + + +R++T
Sbjct: 7 ESGLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIIT---- 60
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAV-----ANATDNDKKRKEKEECQI 144
L +A+ K A I + + ++ T++ + ++
Sbjct: 61 ------------------LTGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRL 102
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAV 204
+VP++Q ++IGK G IK +R T ++V T + + I+G ++V
Sbjct: 103 VVPATQCGSLIGKGGCKIKEIRKSTGAQVQVAGDMLPNST-------EQAITIAGMPQSV 155
Query: 205 KKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGL--------YPNAD 256
+ + I +M + + T+ P +P+ P+ GG YP+A
Sbjct: 156 TECVKQICLVMLETISQSPQGRVMTIPYQP----MPASSPVICAGGQDRYSNTAGYPHAT 211
Query: 257 PIL--PSRSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGAS----------- 303
L P SI G + L + N + +++ G G +
Sbjct: 212 HDLEGPPLDAYSIQGQHTISPL--HLANLNQVARQQSHFAMMHGGTGFAGIDSNSPEVKG 269
Query: 304 ------QSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITV 357
S + + P N IG +IG+ G I IRQ SGAQI + + + +T+
Sbjct: 270 YWASLDASTQTTHELTIPNNLIGCIIGRQGTNINEIRQMSGAQIKIANPVEGSSGRQVTI 329
Query: 358 T 358
T
Sbjct: 330 T 330
>gi|326488325|dbj|BAJ93831.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 520
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 153/333 (45%), Gaps = 47/333 (14%)
Query: 38 IYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVE 97
++R+L +G++IG+ G+ I + E++AR+K++D PG +R V I + KD+ D
Sbjct: 121 VFRVLVSTQKVGALIGRKGEFIKRMCDESKARIKILDGPPGVPERAVMISA--KDEPDAL 178
Query: 98 VDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKE-ECQILVPSSQSANIIG 156
V A D LL+VH I + + + TD +K ++LVP+SQ+ ++IG
Sbjct: 179 V----------PPAIDVLLRVHNRITDGLDSETDQAQKGASPAGPTRLLVPASQAGSLIG 228
Query: 157 KAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMY 216
K G TIK ++ ++ ++++ E A+ D V I GE V KA+ I+ +
Sbjct: 229 KQGTTIKSIQDASKCALRIL-----ENVPPVALNDDRVVEIQGEPHDVHKAVELIANHLR 283
Query: 217 KF-SPREDIPL-------ETTVREAP----------PSIIIPSDVPIYPPG-GLYPNADP 257
KF R +PL + RE P P P ++P PG G P+ P
Sbjct: 284 KFLVDRSVLPLFEMQMKVHSAPREQPMPAPQQWGPPPPWSHPPNIPPSGPGYGGNPHFMP 343
Query: 258 ILPSRSV---PSILGAARVPD--LQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRV 312
P S P++ + P + Y N ++G +S G+SQ L ++
Sbjct: 344 PRPQDSYYPPPNVHHVEKQPHYGISSYGRDANPTAAPTSGNQHLSH--GSSQ---LSQKM 398
Query: 313 LCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDD 345
P + VIG G I IR+ SGA I + +
Sbjct: 399 QVPLSYADAVIGSAGANISYIRKHSGATISIQE 431
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 98/349 (28%), Positives = 155/349 (44%), Gaps = 42/349 (12%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
E V RVL K+G +IG+ G IK + S A+I + D E + ++A + PD +
Sbjct: 119 ESVFRVLVSTQKVGALIGRKGEFIKRMCDESKARIKILDGPPGVPERAVMISAKDEPDAL 178
Query: 367 KSMAVEAVLLLQTKINDEDDDTV-----------TIRLLVSSKVIGCIIGKSGSIINEIR 415
A++ +L + +I D D RLLV + G +IGK G+ I I+
Sbjct: 179 VPPAIDVLLRVHNRITDGLDSETDQAQKGASPAGPTRLLVPASQAGSLIGKQGTTIKSIQ 238
Query: 416 KRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQI------------ILRLRDD 463
+K +RI + + P A +D +VE+ GE V A+ I +L L +
Sbjct: 239 DASKCALRILE-NVPPVALNDDRVVEIQGEPHDVHKAVELIANHLRKFLVDRSVLPLFEM 297
Query: 464 ALKDRDGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGY--------DQRADS---G 512
+K R P+ A + S P+IPP GP GY + DS
Sbjct: 298 QMKVHSAPREQPMPAPQQWGPPPPWSH---PPNIPPSGP-GYGGNPHFMPPRPQDSYYPP 353
Query: 513 SGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKA 572
+ + YG S +P + +S + L G L+ ++ VP + VIG A
Sbjct: 354 PNVHHVEKQPHYGISSYGRDANPTAAPTSGNQHLSHGS-SQLSQKMQVPLSYADAVIGSA 412
Query: 573 GSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFI 621
G+N++ IRK SGATI + + G+ I+G+ Q + A+ LI+ F+
Sbjct: 413 GANISYIRKHSGATISIQEGVP--GEMTVEIAGSASQVQTAQQLIKNFM 459
>gi|219888687|gb|ACL54718.1| unknown [Zea mays]
Length = 448
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 103/184 (55%), Gaps = 17/184 (9%)
Query: 38 IYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVE 97
++R++ P +GS+IG+ G++I + +ET+ARV++++ GA +R+V V KED +
Sbjct: 47 VFRLVVPVLKVGSIIGRKGELIKRLVEETKARVRILEGPVGATERIVL----VSGKEDPD 102
Query: 98 VDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEEC--QILVPSSQSANII 155
++ L A DAL++V + A + + + C ++LVP +Q+ N+I
Sbjct: 103 LE--------LPPAMDALMRVFKRVTGITDGAAEGTQAAATPDVCAARLLVPGAQAINLI 154
Query: 156 GKAGATIKRLRSKTRTSIKVTPKDASE-PTHSCAMEFDNFVLISGESEAVKKALFAISAI 214
GK GATIK ++ T +I+V D E P + + + V I G++E V KAL A+S
Sbjct: 155 GKQGATIKAIQESTSATIRVISVDEHERPFY--VTDDERIVEIQGDTEKVLKALQAVSNH 212
Query: 215 MYKF 218
+ KF
Sbjct: 213 LRKF 216
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 148/348 (42%), Gaps = 40/348 (11%)
Query: 309 VIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKS 368
V R++ P K+G +IG+ G IK + + + A++ + + E ++ V+ E PD
Sbjct: 47 VFRLVVPVLKVGSIIGRKGELIKRLVEETKARVRILEGPVGATERIVLVSGKEDPDLELP 106
Query: 369 MAVEAVLLLQTKINDEDD------------DTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
A++A++ + ++ D D RLLV +IGK G+ I I++
Sbjct: 107 PAMDALMRVFKRVTGITDGAAEGTQAAATPDVCAARLLVPGAQAINLIGKQGATIKAIQE 166
Query: 417 RTKADVRI---SKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLR----DDALKDRD 469
T A +R+ + ++P ++ +VE+ G+ V AL + LR D ++
Sbjct: 167 STSATIRVISVDEHERPFYVTDDERIVEIQGDTEKVLKALQAVSNHLRKFLVDHSVLPLF 226
Query: 470 GSRNPPVGADHIYSSGTGISMPPL-------LPSI-------PPVGPLGYDQRADSGSGI 515
N V D + +S P + LPS+ PL ++ + I
Sbjct: 227 EKTNTTVSQDRNGDGWSDMSRPSIGSAQVNQLPSVLDDYILQVKRDPLYLERESLVDHNI 286
Query: 516 GMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSN 575
S SLYG D ++ + G L +T + +P +IG G+N
Sbjct: 287 HR-SGVSLYGR------DPALSTLRPSAVHGAGSLLTQITQTMQIPLTYAEDIIGVKGAN 339
Query: 576 LANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFIMA 623
+A IR SGA + + +S S D I GT Q +AA+ LIQ + A
Sbjct: 340 IAYIRANSGAVVTIQESLGSPDDITVEIKGTSSQVQAAQQLIQDSLAA 387
>gi|194222666|ref|XP_001498933.2| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 1 [Equus caballus]
Length = 620
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 157/333 (47%), Gaps = 41/333 (12%)
Query: 301 GASQSEE--LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
G+SQ+ + +R+L P +G +IGK G TIK+I + + +++D+ K+N VT
Sbjct: 206 GSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHR-KENSGAAEKPVT 264
Query: 359 AIESPDDIKSMAVEAVLLLQTKINDEDD--DTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
+P+ S A +L + K DE + + +++L + ++G +IGK G + +I
Sbjct: 265 IHATPEGT-SEACRMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEH 323
Query: 417 RTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRD----DALKDRDGSR 472
T + IS + + + V G V + +A ++I+ +LR+ D L +
Sbjct: 324 ETGTKITISSLQDLSIYNP-ERTITVKGTVEACANAEIEIMKKLREAFENDMLAVNQQAN 382
Query: 473 NPP---VGADHIYSSGTGISMPPL----LPSIPPVGPLGYDQRADSGSGIGMLSSSSLYG 525
P + A I+S+G + PP +P PP P + SG SSLY
Sbjct: 383 LIPGLNLSALGIFSTGLSMLPPPAGPRGVPPAPPYHPFA------THSGY----FSSLYP 432
Query: 526 YGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGA 585
S P+ SY P + + +P AVG +IGK G+++ + + +GA
Sbjct: 433 PHQFS----PFPHHHSY--------PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGA 480
Query: 586 TIEMSDSKSSR-GDRVALISGTPEQKRAAENLI 617
+I+++ ++ +R+ +I+G PE + A+ I
Sbjct: 481 SIKIAPAEGPDVSERMVIITGPPEAQFKAQGRI 513
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 93/427 (21%), Positives = 175/427 (40%), Gaps = 58/427 (13%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKEDVEV 98
RIL P +G++IGK G I +I ++T++RV + GA ++ VTI++
Sbjct: 218 RILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHA---------- 267
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
E A +L++ A+ + K E+ +IL + +IGK
Sbjct: 268 -----TPEGTSEACRMILEIMQKEAD--------ETKLAEEIPLKILAHNGLVGRLIGKE 314
Query: 159 GATIKRLRSKTRTSIKVTP-KDAS--EPTHSCAMEFDNFVLISGESEAVKKALFAISAIM 215
G +K++ +T T I ++ +D S P + ++ + E E +KK A M
Sbjct: 315 GRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGTVEACANAEIEIMKKLREAFENDM 374
Query: 216 YKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPD 275
+ + ++ P + + + G++ +LP + P G P
Sbjct: 375 LAVNQQANLI---------PGLNLSAL-------GIFSTGLSMLPPPAGPR--GVPPAPP 416
Query: 276 LQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQ 335
+A + S E+ ++ + P +G +IGK G IK + +
Sbjct: 417 YHPFATHSGYFSSLYPPHQFSPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLAR 476
Query: 336 ASGAQIDVDDTK--DNRDECVITVTAIESPDDIKSMA---VEAVLLLQTKINDEDDDTVT 390
+GA I + + D + VI I P + + A + L + N +++ +
Sbjct: 477 FAGASIKIAPAEGPDVSERMVI----ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLE 532
Query: 391 IRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDE-LVEVVGEVGSV 449
+ V S G +IGK G +NE++ T A+V + + P D N+E +V ++G +
Sbjct: 533 AHIRVPSSTAGRVIGKGGKTVNELQNLTSAEVIVPRDQTP---DENEEVIVRIIGHFFAS 589
Query: 450 RDALVQI 456
+ A +I
Sbjct: 590 QTAQRKI 596
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 58/148 (39%), Gaps = 24/148 (16%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPF-PGAKDRVVTIYSHVKDK 93
E I + P +G++IGK G I + + A +K+ P +R+V I
Sbjct: 447 EQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII------- 499
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
+A K I + + K + K E I VPSS +
Sbjct: 500 ---------------TGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGR 544
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+IGK G T+ L++ T + + P+D +
Sbjct: 545 VIGKGGKTVNELQNLTSAEV-IVPRDQT 571
>gi|414867775|tpg|DAA46332.1| TPA: nucleic acid binding protein [Zea mays]
Length = 448
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 103/184 (55%), Gaps = 17/184 (9%)
Query: 38 IYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVE 97
++R++ P +GS+IG+ G++I + +ET+ARV++++ GA +R+V V KED +
Sbjct: 47 VFRLVVPVLKVGSIIGRKGELIKRLVEETKARVRILEGPVGATERIVL----VSGKEDPD 102
Query: 98 VDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEEC--QILVPSSQSANII 155
++ L A DAL++V + A + + + C ++LVP +Q+ N+I
Sbjct: 103 LE--------LPPAMDALMRVFKRVTGITDGAAEGTQAAATPDVCAARLLVPGAQAINLI 154
Query: 156 GKAGATIKRLRSKTRTSIKVTPKDASE-PTHSCAMEFDNFVLISGESEAVKKALFAISAI 214
GK GATIK ++ T +I+V D E P + + + V I G++E V KAL A+S
Sbjct: 155 GKQGATIKAIQESTSATIRVISVDEHERPFY--VTDDERIVEIQGDTEKVLKALQAVSNH 212
Query: 215 MYKF 218
+ KF
Sbjct: 213 LRKF 216
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 146/343 (42%), Gaps = 40/343 (11%)
Query: 309 VIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKS 368
V R++ P K+G +IG+ G IK + + + A++ + + E ++ V+ E PD
Sbjct: 47 VFRLVVPVLKVGSIIGRKGELIKRLVEETKARVRILEGPVGATERIVLVSGKEDPDLELP 106
Query: 369 MAVEAVLLLQTKINDEDD------------DTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
A++A++ + ++ D D RLLV +IGK G+ I I++
Sbjct: 107 PAMDALMRVFKRVTGITDGAAEGTQAAATPDVCAARLLVPGAQAINLIGKQGATIKAIQE 166
Query: 417 RTKADVRI---SKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLR----DDALKDRD 469
T A +R+ + ++P ++ +VE+ G+ V AL + LR D ++
Sbjct: 167 STSATIRVISVDEHERPFYVTDDERIVEIQGDTEKVLKALQAVSNHLRKFLVDHSVLPLF 226
Query: 470 GSRNPPVGADHIYSSGTGISMPPL-------LPSI-------PPVGPLGYDQRADSGSGI 515
N V D + +S P + LPS+ PL ++ + I
Sbjct: 227 EKTNTTVSQDRNGDGWSDMSRPSIGSAQVNQLPSVLDDYILQVKRDPLYLERESLVDHNI 286
Query: 516 GMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSN 575
S SLYG D ++ + G L +T + +P +IG G+N
Sbjct: 287 HR-SGVSLYGR------DPALSTLRPSAVHGAGSLLTQITQTMQIPLTYAEDIIGVKGAN 339
Query: 576 LANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQ 618
+A IR SGA + + +S S D I GT Q +AA+ LIQ
Sbjct: 340 IAYIRANSGAVVTIQESLGSPDDITVEIKGTSSQVQAAQQLIQ 382
>gi|383858850|ref|XP_003704912.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Megachile rotundata]
Length = 624
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 151/332 (45%), Gaps = 45/332 (13%)
Query: 297 SGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVIT 356
SG+ G+ + + +R+L + +G +IG+ G TI+ I Q + A++DV KDN
Sbjct: 176 SGVSGSGRQTDFPLRILVQSDMVGAIIGRQGSTIRQITQMTRARVDVHR-KDNVGSLEKA 234
Query: 357 VTAIESPDDIKSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
+T +P++ + + + ++Q + N + +T+++L + +IG IIGK G+ I I +
Sbjct: 235 ITIYGNPENCTNACKKILEVMQQEANSINKGEITLKILAHNNLIGRIIGKGGTTIKRIMQ 294
Query: 417 RTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPV 476
T + +S + + + ++ V G + ++ A I +LR D
Sbjct: 295 DTDTKITVSSINDINSFNL-ERIITVKGTIENMSKAESMISSKLRQSYENDLQ------- 346
Query: 477 GADHIYSSGTGISMPP---LLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGD 533
+M P + P + P+ + S G G+ YGS G
Sbjct: 347 ------------AMAPQSMMFPGLHPMAMMSTAGMGYSSRGPGL--------YGS---GP 383
Query: 534 SPYGSMSSYSSKLYGGLPPPLTLE---VLVPANAVGKVIGKAGSNLANIRKISGAT---- 586
+PY +S + G+P T E + +P ++VG +IG GS++ NI + SGA+
Sbjct: 384 APYPYQASLPPQQ--GVPATDTQETAFLYIPNSSVGAIIGTKGSHIRNIIRFSGASVKIA 441
Query: 587 -IEMSDSKSSRGDRVALISGTPEQKRAAENLI 617
IE + +R I G+PE + A+ LI
Sbjct: 442 PIEQDKPAEQQTERKVTIVGSPESQWKAQYLI 473
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 112/431 (25%), Positives = 185/431 (42%), Gaps = 68/431 (15%)
Query: 32 GNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDP-FPGAKDRVVTIYSHV 90
G + RIL ++G++IG+ G I I Q TRARV V G+ ++ +TIY
Sbjct: 182 GRQTDFPLRILVQSDMVGAIIGRQGSTIRQITQMTRARVDVHRKDNVGSLEKAITIY--- 238
Query: 91 KDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQ 150
+ E A +L+V AN++ K + +IL ++
Sbjct: 239 ------------GNPENCTNACKKILEVMQQEANSI---------NKGEITLKILAHNNL 277
Query: 151 SANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFA 210
IIGK G TIKR+ T T I V S + + + + G E + KA
Sbjct: 278 IGRIIGKGGTTIKRIMQDTDTKITV-----SSINDINSFNLERIITVKGTIENMSKAESM 332
Query: 211 ISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGA 270
IS+ + + S D+ AP S++ P GL+P A S + +
Sbjct: 333 ISSKLRQ-SYENDLQAM-----APQSMMFP---------GLHPMA-----MMSTAGMGYS 372
Query: 271 ARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTI 330
+R P L Y +P Y L G V A+ ++E + P + +G +IG G I
Sbjct: 373 SRGPGL--YGSGPAPYP-YQASLPPQQG-VPATDTQETAF-LYIPNSSVGAIIGTKGSHI 427
Query: 331 KSIRQASGAQIDV---DDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKINDE--- 384
++I + SGA + + + K + VT + SP+ +A L+ K+ +E
Sbjct: 428 RNIIRFSGASVKIAPIEQDKPAEQQTERKVTIVGSPES----QWKAQYLIFEKMREEGFV 483
Query: 385 ---DDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVE 441
DD +TI +LV S +G IIGK G + E+++ T + +++S+ + + V
Sbjct: 484 AGTDDVRLTIEILVPSAQVGRIIGKGGQNVRELQRVTGSIIKLSEQQSTSPSADEEATVH 543
Query: 442 VVGEVGSVRDA 452
++G SV+ A
Sbjct: 544 IIGPFFSVQSA 554
Score = 46.2 bits (108), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 34/42 (80%)
Query: 554 LTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSS 595
LT+E+LVP+ VG++IGK G N+ +++++G+ I++S+ +S+
Sbjct: 491 LTIEILVPSAQVGRIIGKGGQNVRELQRVTGSIIKLSEQQST 532
>gi|432848574|ref|XP_004066413.1| PREDICTED: poly(rC)-binding protein 3-like [Oryzias latipes]
Length = 349
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 152/323 (47%), Gaps = 18/323 (5%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
L IR+L ++G +IGK G T+K +R+ SGA+I++ + N E ++T K
Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREDSGARINISE--GNCPERIVTXXXXXX-XIFK 72
Query: 368 SMAVEAVLLLQTKINDEDDDT------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTKAD 421
+ A+ A + IN + VT+RL+V + G +IGK GS I E+R+ T A
Sbjct: 73 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQ 132
Query: 422 VRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHI 481
V+++ P ++ + V + G ++ + QI + + + K P + +
Sbjct: 133 VQVAGDMLP---NSTERAVTISGAPEAIIQCVKQICVVMLESPPKGATIPYRPKPASTPV 189
Query: 482 YSSGTGISMPPLLPSIPPVGPLGYDQR--ADSGSGIGMLSSSSLYGYGSLSMGDSPYGSM 539
SG + PL S + L Q A + G + L L+M +P+ +
Sbjct: 190 IFSGGQVRADPLGASTANLSLLLQHQPLPAYTIQGQYAIPHPDLSKLHQLAMQQTPFTPL 249
Query: 540 SSYSSKLYGGLPP---PLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSR 596
++ + GL T E+ +P + +G +IG+ G+ + IR++SGA I+++++
Sbjct: 250 GQ-TTPAFPGLDASNQASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAMEGS 308
Query: 597 GDRVALISGTPEQKRAAENLIQA 619
+R I+GTP A+ LI A
Sbjct: 309 SERQITITGTPANISLAQYLINA 331
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 148/359 (41%), Gaps = 71/359 (19%)
Query: 25 INEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVV 84
I + E G ++ R+L +GS+IGK G+ + +R+++ AR+ + + +R+V
Sbjct: 4 IKVQSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREDSGARINISEG--NCPERIV 61
Query: 85 TIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIA-----NAVANATDNDKKRKEK 139
T + K A IA + + + +++ K
Sbjct: 62 TXXX----------------------XXXXIFKAFAMIAYKFEEDIINSMSNSPATSKPP 99
Query: 140 EECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISG 199
+++VP+SQ ++IGK G+ IK +R T ++V T + V ISG
Sbjct: 100 VTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVAGDMLPNST-------ERAVTISG 152
Query: 200 ESEAVKKALFAISAIMYKFSPR-EDIPLETTVREAP---PSIIIPSDVPIYPPGGLYPNA 255
EA+ + + I +M + P+ IP R P P I V P G N
Sbjct: 153 APEAIIQCVKQICVVMLESPPKGATIPY----RPKPASTPVIFSGGQVRADPLGASTANL 208
Query: 256 DPILPSRSVP--SILGAARV--PDLQG----------YADTGNTWPVYSTGLSLVSGLVG 301
+L + +P +I G + PDL + G T P + GL
Sbjct: 209 SLLLQHQPLPAYTIQGQYAIPHPDLSKLHQLAMQQTPFTPLGQTTPAF-------PGLDA 261
Query: 302 ASQ--SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
++Q + EL I P + IG +IG+ G I IRQ SGAQI + + + E IT+T
Sbjct: 262 SNQASTHELTI----PNDLIGCIIGRQGTKINEIRQMSGAQIKIANAMEGSSERQITIT 316
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 9/92 (9%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+TIRLL+ K +G IIGK G + ++R+ + A + IS+G+ P + +V
Sbjct: 15 TLTIRLLMHGKEVGSIIGKKGETVKKMREDSGARINISEGNCP------ERIVTXXXXXX 68
Query: 448 SVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
+ A I + +D ++ + + PPV
Sbjct: 69 XIFKAFAMIAYKFEEDIINSMSNSPATSKPPV 100
>gi|348507477|ref|XP_003441282.1| PREDICTED: poly(rC)-binding protein 3-like [Oreochromis niloticus]
Length = 434
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 147/328 (44%), Gaps = 46/328 (14%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTA-----IES 362
L +R+L ++G +IGK G T+K +R+ SGA+I++ + + E ++T+T +
Sbjct: 17 LTLRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GSSPERIVTITGPTEGIFRA 74
Query: 363 PDDIKSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADV 422
I E + T N VT+RL+ G +IGK GS I EIR+ T A V
Sbjct: 75 FSMIAQKFEEDITAAMTNSNVTSKPPVTLRLVFPGSQCGSLIGKGGSKIKEIRETTGAQV 134
Query: 423 RISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIY 482
+++ GD D+ + V + G A+ Q + + L+ +PP GA
Sbjct: 135 QVA-GDM--LPDSTERAVTISG----TPQAITQCVRHICSVMLE------SPPKGAT--- 178
Query: 483 SSGTGISMPPLLPSIPPVGPLG--------YDQRADSGSGIGMLSSSSLYGYGSLSMGDS 534
+P P V P G + +A + G + L L+M
Sbjct: 179 -----------IPYRPKVIPAGTHAVLAPQHSAQAFAIPGQYAFAHQDLTKLHQLAMQHI 227
Query: 535 PYGSMSSYSSKLYGGL---PPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSD 591
P S+ S+ + GL P + E+ +P + +G +IG+ GS + IR++SGA I+++
Sbjct: 228 PLPSLGQ-SNPTFPGLDASAPTSSQELAIPNDFIGCIIGRQGSKINEIRQVSGAHIKIAS 286
Query: 592 SKSSRGDRVALISGTPEQKRAAENLIQA 619
+ R I+G+P A+ LI A
Sbjct: 287 ATDGSAMRQVTITGSPASISVAQYLINA 314
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 147/359 (40%), Gaps = 71/359 (19%)
Query: 25 INEKDEKGNEESV----IYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAK 80
+++K+E ++ S+ R+L +GS+IGK G+ + +R+E+ AR+ + + +
Sbjct: 1 MSDKEEMASDGSLNVTLTLRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--SSP 58
Query: 81 DRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAV-----ANATDNDKK 135
+R+VTI + + + + IA A T+++
Sbjct: 59 ERIVTI----------------------TGPTEGIFRAFSMIAQKFEEDITAAMTNSNVT 96
Query: 136 RKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFV 195
K +++ P SQ ++IGK G+ IK +R T ++V + T + V
Sbjct: 97 SKPPVTLRLVFPGSQCGSLIGKGGSKIKEIRETTGAQVQVAGDMLPDST-------ERAV 149
Query: 196 LISGESEAVKKALFAISAIMYKFSPR--------EDIPLETTVREAPPSIIIPSDVPIYP 247
ISG +A+ + + I ++M + P+ + IP T AP +P
Sbjct: 150 TISGTPQAITQCVRHICSVMLESPPKGATIPYRPKVIPAGTHAVLAPQHSAQAFAIP--- 206
Query: 248 PGGLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEE 307
G Y A L L +P L + T+P GL + + S+E
Sbjct: 207 --GQYAFAHQDLTKLHQ---LAMQHIP-LPSLGQSNPTFP----GLDASA----PTSSQE 252
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
L I P + IG +IG+ G I IRQ SGA I + D +T+T SP I
Sbjct: 253 LAI----PNDFIGCIIGRQGSKINEIRQVSGAHIKIASATDGSAMRQVTITG--SPASI 305
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 9/92 (9%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+T+RLL+ K +G IIGK G + ++R+ + A + IS+G P + +V + G
Sbjct: 16 TLTLRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGSSP------ERIVTITGPTE 69
Query: 448 SVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
+ A I + +D A+ + + + PPV
Sbjct: 70 GIFRAFSMIAQKFEEDITAAMTNSNVTSKPPV 101
>gi|356562072|ref|XP_003549298.1| PREDICTED: poly(rC)-binding protein 3-like [Glycine max]
Length = 436
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 99/344 (28%), Positives = 162/344 (47%), Gaps = 42/344 (12%)
Query: 309 VIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKS 368
V R++ P K+G +IG+ G IK + + A+I V D + ++ ++ E P+ S
Sbjct: 47 VFRLIVPVLKVGSIIGRKGELIKKTCEETKARIRVLDGAVGTSDRIVLISGKEEPEAPLS 106
Query: 369 MAVEAVLLLQTKIN-----DEDDDT-----VTIRLLVSSKVIGCIIGKSGSIINEIRKRT 418
A+ AV+ + +++ D ++ ++RLLV+S +IGK GS+I I++ T
Sbjct: 107 PAMNAVIRVFKRVSGFSEIDAENKASAVAFCSVRLLVASTQAINLIGKQGSLIKSIQENT 166
Query: 419 KADVRISKGDK-PKCADANDELVEVVGEVGSVRDALVQIILRLR-----DDALKDRDGSR 472
A VR+ GD+ P A A++ +VE+ GE V AL ++ LR + L + +
Sbjct: 167 GASVRVLSGDEVPFYAAADERIVELQGEAMKVLKALEAVVGHLRKFLVDNSVLPLFEKTY 226
Query: 473 NPPVGADHIYSSGTGISMPPL----LPSIPPVGPLGYDQ---RADSGSGIGML---SSSS 522
N + +H + T + P L PSI PL + AD S + L S+ S
Sbjct: 227 NATISQEH-QADTTWVDKPSLHSASQPSIVTDLPLSTKRDSLFADRESQLDSLLPPSTMS 285
Query: 523 LYGYGSLSMGDSPYGSMSSY-SSKLYGGLPPPLTLEVL----VPANAVGKVIGKAGSNLA 577
+YG S S+S SS L PP+ V+ +P + +IG G+N+
Sbjct: 286 IYGQDS---------SLSGLRSSALSRPSAPPIVTTVIQTMQIPLSYAEDIIGIQGTNIE 336
Query: 578 NIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFI 621
IR SGA + + +S + + I GT Q + A+ LIQ I
Sbjct: 337 YIRCTSGAILTVQESPVP-DEIIVEIKGTSSQVQTAQQLIQEVI 379
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 101/194 (52%), Gaps = 19/194 (9%)
Query: 27 EKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTI 86
EK G ++R++ P +GS+IG+ G++I +ET+AR++V+D G DR+V I
Sbjct: 36 EKRWPGWPGHCVFRLIVPVLKVGSIIGRKGELIKKTCEETKARIRVLDGAVGTSDRIVLI 95
Query: 87 YSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEEC--QI 144
KE+ E PL A +A+++V ++ + D + K C ++
Sbjct: 96 ----SGKEEPEA--------PLSPAMNAVIRVFKRVSG--FSEIDAENKASAVAFCSVRL 141
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAV 204
LV S+Q+ N+IGK G+ IK ++ T S++V D P ++ A E V + GE+ V
Sbjct: 142 LVASTQAINLIGKQGSLIKSIQENTGASVRVLSGDEV-PFYAAADE--RIVELQGEAMKV 198
Query: 205 KKALFAISAIMYKF 218
KAL A+ + KF
Sbjct: 199 LKALEAVVGHLRKF 212
>gi|345497208|ref|XP_001599286.2| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Nasonia vitripennis]
Length = 643
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 155/334 (46%), Gaps = 47/334 (14%)
Query: 296 VSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVI 355
SGL GA + + +R+L + +G +IG+ G TI+ I Q + A++DV KDN
Sbjct: 176 FSGLPGAGRQTDFPLRILVQSDMVGAIIGRQGSTIRQITQMTRARVDVHR-KDNLGSLEK 234
Query: 356 TVTAIESPDDIKSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIR 415
+T +P++ + + + ++ + ++ + +T+++L + +IG IIGK G+ I I
Sbjct: 235 AITIYGNPENCTNACKKILEVMHQEASNTNKGEITLKILAHNNLIGRIIGKGGNTIKRIM 294
Query: 416 KRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPP 475
+ T + +S + + + ++ V G + ++ A I +LR D
Sbjct: 295 QDTDTKITVSSINDINSFNL-ERIITVKGSIENMSKAEAMISNKLRQSYENDLQ------ 347
Query: 476 VGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGS-----LS 530
+M P P + P+ M+S++S+ GY S
Sbjct: 348 -------------AMAPQSMMFPGLHPM------------AMMSTASM-GYNSRGPALYG 381
Query: 531 MGDSPYGSMSSYSSKLYGGLPPPL--TLEVLVPANAVGKVIGKAGSNLANIRKISGATIE 588
G +PY S+ + + G L T + +P N+VG +IG GS++ NI + SGA+++
Sbjct: 382 TGPAPYPYQSNLTPQ-QGVLTSDAQETTFLYIPNNSVGAIIGTKGSHIRNIIRFSGASVK 440
Query: 589 MSDSKS-----SRGDRVALISGTPEQKRAAENLI 617
++ +S + +R I G+PE + A+ LI
Sbjct: 441 IAPLESDKPAEQQTERKVTIVGSPESQWKAQYLI 474
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 115/437 (26%), Positives = 188/437 (43%), Gaps = 72/437 (16%)
Query: 32 GNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV--DPFPGAKDRVVTIYSH 89
G + RIL ++G++IG+ G I I Q TRARV V D G+ ++ +TIY
Sbjct: 183 GRQTDFPLRILVQSDMVGAIIGRQGSTIRQITQMTRARVDVHRKDNL-GSLEKAITIYG- 240
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSS 149
N + A + L +H +N K + +IL ++
Sbjct: 241 -------------NPENCTNACKKILEVMHQEASNT----------NKGEITLKILAHNN 277
Query: 150 QSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALF 209
IIGK G TIKR+ T T I V S + + + + G E + KA
Sbjct: 278 LIGRIIGKGGNTIKRIMQDTDTKITV-----SSINDINSFNLERIITVKGSIENMSKAEA 332
Query: 210 AISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILG 269
IS + + S D+ AP S++ P GL+P A S S+
Sbjct: 333 MISNKLRQ-SYENDLQAM-----APQSMMFP---------GLHPMA-----MMSTASMGY 372
Query: 270 AARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGT 329
+R P L G TG Y + L+ G++ + E + + P N +G +IG G
Sbjct: 373 NSRGPALYG---TGPAPYPYQSNLTPQQGVLTSDAQETTFLYI--PNNSVGAIIGTKGSH 427
Query: 330 IKSIRQASGAQIDV---DDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKINDE-- 384
I++I + SGA + + + K + VT + SP+ +A L+ K+ +E
Sbjct: 428 IRNIIRFSGASVKIAPLESDKPAEQQTERKVTIVGSPES----QWKAQYLIFEKMREEGF 483
Query: 385 ----DDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGD-KPKCADANDEL 439
+D +T+ +LV S +G IIGK G + E+++ T + +++S+ P AD +
Sbjct: 484 VSGTEDVRLTVEILVPSAQVGRIIGKGGQNVRELQRVTGSVIKLSEQQATPPTAD-EETT 542
Query: 440 VEVVGEVGSVRDALVQI 456
V ++G SV+ A +I
Sbjct: 543 VHIIGPFFSVQSAQRRI 559
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 34/42 (80%)
Query: 554 LTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSS 595
LT+E+LVP+ VG++IGK G N+ +++++G+ I++S+ +++
Sbjct: 492 LTVEILVPSAQVGRIIGKGGQNVRELQRVTGSVIKLSEQQAT 533
>gi|241025456|ref|XP_002406183.1| poly(rc) binding protein, putative [Ixodes scapularis]
gi|215491885|gb|EEC01526.1| poly(rc) binding protein, putative [Ixodes scapularis]
Length = 398
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 149/311 (47%), Gaps = 37/311 (11%)
Query: 316 FNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVL 375
++G +IGK G IK R+ SGA+I++ D + E ++TVT + +K+ ++ A
Sbjct: 1 MQEVGSIIGKKGDNIKKFREESGAKINISD--GSCPERIVTVTG-STEAILKAFSLIARK 57
Query: 376 LLQTKINDEDDDT------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDK 429
+ + + + VT+RL+V + G +IGK GS I EIR+ +A ++++
Sbjct: 58 FEEVSTSSHSNGSHLPKPPVTLRLIVPASQCGSLIGKGGSKIKEIRE-ARASIQVASEML 116
Query: 430 PKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSGTGIS 489
P ++ + V V G ++ + QI + + +PP GA Y
Sbjct: 117 P---NSTERAVTVSGTADAITKCIYQICCVMME----------SPPKGATIPYRPK---- 159
Query: 490 MPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPY---GSMSSYSSKL 546
P++PPV + +A + G + L L++ +P S+ + + +
Sbjct: 160 -----PAMPPV--IFAGGQAYTVQGQYAIPHPDLTKLHQLALQHAPLLPGHSVGAINPQA 212
Query: 547 YGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGT 606
T E+ +P + +G +IGK GS + IR++SGATI++S+S+ DR ISGT
Sbjct: 213 AIATASTTTTEMTIPNDLIGCIIGKGGSKINEIRQLSGATIKISNSEEGSKDRTVTISGT 272
Query: 607 PEQKRAAENLI 617
PE A+ LI
Sbjct: 273 PEAINLAQYLI 283
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 143/341 (41%), Gaps = 66/341 (19%)
Query: 48 IGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEP 107
+GS+IGK G I R+E+ A++ + D +R+VT+
Sbjct: 4 VGSIIGKKGDNIKKFREESGAKINISDG--SCPERIVTV--------------------- 40
Query: 108 LCAAQDALLKVHAAIAN-----AVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATI 162
+ +A+LK + IA + ++ ++ K +++VP+SQ ++IGK G+ I
Sbjct: 41 -TGSTEAILKAFSLIARKFEEVSTSSHSNGSHLPKPPVTLRLIVPASQCGSLIGKGGSKI 99
Query: 163 KRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPR- 221
K +R + R SI+V + T + V +SG ++A+ K ++ I +M + P+
Sbjct: 100 KEIR-EARASIQVASEMLPNST-------ERAVTVSGTADAITKCIYQICCVMMESPPKG 151
Query: 222 EDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQGYAD 281
IP + A P +I Y G Y P L L P L G++
Sbjct: 152 ATIPYRP--KPAMPPVIFAGGQ-AYTVQGQYAIPHPDLTKLHQ---LALQHAPLLPGHS- 204
Query: 282 TGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQI 341
+ ++ + + + P + IG +IGKGG I IRQ SGA I
Sbjct: 205 -----------VGAINPQAAIATASTTTTEMTIPNDLIGCIIGKGGSKINEIRQLSGATI 253
Query: 342 DVDDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKIN 382
+ ++++ + +T++ EA+ L Q IN
Sbjct: 254 KISNSEEGSKDRTVTISGTP----------EAINLAQYLIN 284
Score = 43.5 bits (101), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 29/43 (67%)
Query: 44 PDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTI 86
P+ +IG +IGK G IN IRQ + A +K+ + G+KDR VTI
Sbjct: 227 PNDLIGCIIGKGGSKINEIRQLSGATIKISNSEEGSKDRTVTI 269
>gi|327265639|ref|XP_003217615.1| PREDICTED: poly(rC)-binding protein 4-like [Anolis carolinensis]
Length = 422
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 96/345 (27%), Positives = 159/345 (46%), Gaps = 60/345 (17%)
Query: 298 GLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITV 357
GL S L +R+L ++G +IGK G T+K IR+ S A+I + + C +
Sbjct: 18 GLEETELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSTARITISE-----GSCPERI 72
Query: 358 TAIESPDDIKSMAVEAVLLLQTKINDEDDDT------------VTIRLLVSSKVIGCIIG 405
T I D AV ++ K+ +ED T VT+RL++ + G +IG
Sbjct: 73 TTITGSTD---AVFRAVSMIAFKL-EEDLGTGAINGGTVSKPPVTLRLVIPASQCGSLIG 128
Query: 406 KSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDAL 465
K+G+ I EIR+ T A V+++ P ++ + V V G V DA++Q + ++ L
Sbjct: 129 KAGAKIKEIRETTGAQVQVAGDLLP---NSTERAVTVSG----VPDAIIQCVRQICAVIL 181
Query: 466 KDRDGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSG----SGIGMLSSS 521
+ +PP GA Y +S+ P+L S G+ + G + + L
Sbjct: 182 E------SPPKGATIPYHPN--LSLGPVLLS----ANQGFSMQGQYGGISQAEVAKLQQL 229
Query: 522 SLYGYGSLSMGDSP-----YGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNL 576
S + S+G +P + S SS+ E LVP + +G +IG+ GS +
Sbjct: 230 SGHPVSFSSLGQTPSIVAGLDTNSQNSSQ-----------EFLVPNDLIGCIIGRQGSKI 278
Query: 577 ANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFI 621
+ IR++SGA I++ + +R I+GTP A+ LI A +
Sbjct: 279 SEIRQMSGAHIKIGNQTEGSAERHVTITGTPVSITLAQYLISACL 323
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 141/333 (42%), Gaps = 63/333 (18%)
Query: 36 SVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKED 95
++ R+L +GS+IGK G+ + IR+++ AR+ + + +R+ TI
Sbjct: 27 TLTLRMLMHGKEVGSIIGKKGETVKRIREQSTARITISEG--SCPERITTI--------- 75
Query: 96 VEVDDEFNDKEPLCAAQDALLKVHAAIANAV-----ANATDNDKKRKEKEECQILVPSSQ 150
+ DA+ + + IA + A + K ++++P+SQ
Sbjct: 76 -------------TGSTDAVFRAVSMIAFKLEEDLGTGAINGGTVSKPPVTLRLVIPASQ 122
Query: 151 SANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFA 210
++IGKAGA IK +R T ++V T + V +SG +A+ + +
Sbjct: 123 CGSLIGKAGAKIKEIRETTGAQVQVAGDLLPNST-------ERAVTVSGVPDAIIQCVRQ 175
Query: 211 ISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYP---NADPILPSRSVPSI 267
I A+ + E+PP + +P +P L P +A+ +
Sbjct: 176 ICAV---------------ILESPPK---GATIPYHPNLSLGPVLLSANQGFSMQGQYGG 217
Query: 268 LGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQ--SEELVIRVLCPFNKIGRVIGK 325
+ A V LQ + ++ S+V+GL SQ S+E L P + IG +IG+
Sbjct: 218 ISQAEVAKLQQLSGHPVSFSSLGQTPSIVAGLDTNSQNSSQEF----LVPNDLIGCIIGR 273
Query: 326 GGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
G I IRQ SGA I + + + E +T+T
Sbjct: 274 QGSKISEIRQMSGAHIKIGNQTEGSAERHVTIT 306
Score = 38.9 bits (89), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 32/54 (59%)
Query: 33 NEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTI 86
N ++ L P+ +IG +IG+ G I+ IRQ + A +K+ + G+ +R VTI
Sbjct: 252 NSQNSSQEFLVPNDLIGCIIGRQGSKISEIRQMSGAHIKIGNQTEGSAERHVTI 305
>gi|116787292|gb|ABK24450.1| unknown [Picea sitchensis]
Length = 357
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 152/352 (43%), Gaps = 55/352 (15%)
Query: 4 SGKRYRSQRDNDRDGKNQKRRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIR 63
SG R RDG I E E G++ S R+L + GSVIGK G ++ +
Sbjct: 18 SGYSTSPSRSPKRDG-----LIYEPSEDGSKTSSCLRLLVSNAAAGSVIGKGGATVSDFQ 72
Query: 64 QETRARVKVV---DPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHA 120
++ AR+++ + FPG DR++ + + E L AA L K+
Sbjct: 73 TQSGARIQLSRNHEFFPGTTDRIILVTGSIN--------------EILTAANLILQKL-- 116
Query: 121 AIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDA 180
++ A DN+ ++ + ++++P+S IIGK GATIK ++ SIK++ +D
Sbjct: 117 -----LSEAEDNNDVDEKTSQVRLVLPNSVCGGIIGKGGATIKSFVEHSQASIKLSSQDQ 171
Query: 181 SEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYK---FSPREDIPLETTVREAPPSI 237
P S D V I+G E +A+F I + + + ++ + PL T
Sbjct: 172 ILPGVS-----DRLVTITGTLEQQLRAIFLIVSKLAEDPNYAQYANAPLSYTGGSVAGIQ 226
Query: 238 IIPSDVPIYPPGGL-YPNADPILPSRSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLV 296
IP Y P G PN + V + + G P+ + L
Sbjct: 227 GIPGG---YTPVGYGLPNY--------------GSSVYGVNARNNKGLMAPLVAMRSPLP 269
Query: 297 SGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD 348
G+ + +++ P +++G ++G+ G TI I+Q SGA+I + D D
Sbjct: 270 IGVPLVASGALTSVKMAVPDDRVGVIVGRAGRTILDIQQVSGAKIKISDRGD 321
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 148/333 (44%), Gaps = 56/333 (16%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD----NRDECVITVTAIESPDD 365
+R+L G VIGKGG T+ + SGA+I + + D ++ +I
Sbjct: 48 LRLLVSNAAAGSVIGKGGATVSDFQTQSGARIQLSRNHEFFPGTTDRIILVTGSINEILT 107
Query: 366 IKSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRIS 425
++ ++ +L ND D+ T +RL++ + V G IIGK G+ I + ++A +++S
Sbjct: 108 AANLILQKLLSEAEDNNDVDEKTSQVRLVLPNSVCGGIIGKGGATIKSFVEHSQASIKLS 167
Query: 426 KGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSG 485
D+ +D LV + G + A+ I+ +L +D P A + +
Sbjct: 168 SQDQ-ILPGVSDRLVTITGTLEQQLRAIFLIVSKLAED-----------PNYAQYANA-- 213
Query: 486 TGISMPPLLPSIPPVGPLGYDQRADSGSGI-GMLSSSSLYGYGSLSMGDSPYGSMSSYSS 544
PL Y S +GI G+ + GYG + G S YG + +
Sbjct: 214 ----------------PLSYT--GGSVAGIQGIPGGYTPVGYGLPNYGSSVYGVNARNNK 255
Query: 545 KLYGGL-----PPPL-----------TLEVLVPANAVGKVIGKAGSNLANIRKISGATIE 588
L L P P+ ++++ VP + VG ++G+AG + +I+++SGA I+
Sbjct: 256 GLMAPLVAMRSPLPIGVPLVASGALTSVKMAVPDDRVGVIVGRAGRTILDIQQVSGAKIK 315
Query: 589 MSDSK---SSRGDRVALISGTPEQKRAAENLIQ 618
+SD S DR ISG + + A ++++
Sbjct: 316 ISDRGDFISGTNDRQVTISGPIDAVQHARHMLE 348
>gi|327275209|ref|XP_003222366.1| PREDICTED: poly(rC)-binding protein 3-like [Anolis carolinensis]
Length = 461
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 150/340 (44%), Gaps = 36/340 (10%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
L IR+L ++G +IGK G T+K +R+ SGA+I++ + C + I P D
Sbjct: 17 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE-----GSCPERIVTITGPTDAI 71
Query: 368 SMAVEAVLL-LQTKINDEDDDT-------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
A + L + IN ++ VT+RL++ + G +IGK GS I EIR+ T
Sbjct: 72 FKAFSMIALKFEEDINASMTNSTVTSKPPVTLRLVIPASQCGSLIGKGGSKIKEIRESTG 131
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNP-PVGA 478
A V+++ GD ++ + V + G ++ + QI + + + K P P A
Sbjct: 132 AQVQVA-GDM--LPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASA 188
Query: 479 DHIYSSG--------------TGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSS--- 521
I++ G ++ P P+ G S + S
Sbjct: 189 PIIFAGGQVRADTLLASAGNHAVLAQPQTAPAFTIQGQYAIPHPDVSSMHVLYFLYSLLP 248
Query: 522 SLYGYGSLSMGDSPYGSMSSYSSKLYG--GLPPPLTLEVLVPANAVGKVIGKAGSNLANI 579
SL L+M P+ + + G P + E+ +P + +G +IG+ GS + I
Sbjct: 249 SLTKLHQLAMQHPPFTPLGQTTPGFPGLDASTPASSHELTIPNDLIGCIIGRQGSKINEI 308
Query: 580 RKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQA 619
R++SGA I+++++ +R I+G+P A+ LI A
Sbjct: 309 RQMSGAQIKIANATEGSAERQVTITGSPANISLAQYLINA 348
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 94/379 (24%), Positives = 150/379 (39%), Gaps = 77/379 (20%)
Query: 25 INEKDEK----GNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAK 80
+N KD K G ++ R+L +GS+IGK G+ + +R+E+ AR+ + +
Sbjct: 1 MNTKDTKVTEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--SCP 58
Query: 81 DRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAV-----ANATDNDKK 135
+R+VTI DA+ K + IA A+ T++
Sbjct: 59 ERIVTI----------------------TGPTDAIFKAFSMIALKFEEDINASMTNSTVT 96
Query: 136 RKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFV 195
K ++++P+SQ ++IGK G+ IK +R T ++V T + V
Sbjct: 97 SKPPVTLRLVIPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNST-------ERAV 149
Query: 196 LISGESEAVKKALFAISAIMYKFSPR-EDIPLETTVREAPPSIII--------------- 239
ISG +A+ + + I +M + P+ IP AP II
Sbjct: 150 TISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASAP--IIFAGGQVRADTLLASAG 207
Query: 240 -------PSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTWPVYSTG 292
P P + G Y P + S V L + +P L P ++
Sbjct: 208 NHAVLAQPQTAPAFTIQGQYAIPHPDVSSMHVLYFL-YSLLPSLTKLHQLAMQHPPFTPL 266
Query: 293 LSLVSGLVG-----ASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTK 347
G G + S EL I P + IG +IG+ G I IRQ SGAQI + +
Sbjct: 267 GQTTPGFPGLDASTPASSHELTI----PNDLIGCIIGRQGSKINEIRQMSGAQIKIANAT 322
Query: 348 DNRDECVITVTAIESPDDI 366
+ E +T+T SP +I
Sbjct: 323 EGSAERQVTITG--SPANI 339
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+TIRLL+ K +G IIGK G + ++R+ + A + IS+G P + +V + G
Sbjct: 16 TLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGSCP------ERIVTITGPTD 69
Query: 448 SVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
++ A I L+ +D ++ + + PPV
Sbjct: 70 AIFKAFSMIALKFEEDINASMTNSTVTSKPPV 101
>gi|356576359|ref|XP_003556300.1| PREDICTED: RNA-binding protein Nova-1-like [Glycine max]
Length = 337
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 147/328 (44%), Gaps = 48/328 (14%)
Query: 303 SQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD----NRDECVITVT 358
S+ + IR L + G VIGKGG TI + SGA+I + + D ++
Sbjct: 31 SEEKPTYIRFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSRNHEFFPGTTDRIIMVSG 90
Query: 359 AIESPDDIKSMAVEAVL-LLQTKINDEDDD----TVTIRLLVSSKVIGCIIGKSGSIINE 413
AI ++I+ AVE +L L ++++ EDD+ +RL+V + G IIGK G I
Sbjct: 91 AI---NEIQR-AVELILSKLLSELHSEDDNDAEPKTKVRLVVPNGSCGGIIGKGGVTIRS 146
Query: 414 IRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRN 473
+ ++A ++IS D ND LV + G A+ I+ +L +D + S N
Sbjct: 147 FIEDSQAGIKISPQDNNYYGQ-NDRLVMLTGTFDEQMRAIELIVSKLAEDPHYAQ--SMN 203
Query: 474 PPVGADHIYSSG-TGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMG 532
P +Y SG G+ +LPS+ P + R + +G G L +S SL+MG
Sbjct: 204 SPFSYPGVYFSGYQGVPYTYVLPSVAPPAYNAVNYRPNGTAG-GKLQNSKEERSNSLTMG 262
Query: 533 DSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDS 592
V +G V+G+ G N+ I ++SGA I++SD
Sbjct: 263 ---------------------------VADEHIGLVVGRGGRNIMEISQVSGARIKISDR 295
Query: 593 K---SSRGDRVALISGTPEQKRAAENLI 617
S DR I+G+ R AE++I
Sbjct: 296 GDYISGTTDRKVTITGSQRAIRTAESMI 323
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 135/320 (42%), Gaps = 57/320 (17%)
Query: 33 NEESVIY-RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV---DPFPGAKDRVVTIYS 88
+EE Y R L + GSVIGK G I + ++ AR+++ + FPG DR++ +
Sbjct: 31 SEEKPTYIRFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSRNHEFFPGTTDRIIMVSG 90
Query: 89 HVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPS 148
+ + Q A+ + + + + + + DND + K K +++VP+
Sbjct: 91 AINE------------------IQRAVELILSKLLSELHSEDDNDAEPKTK--VRLVVPN 130
Query: 149 SQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKAL 208
IIGK G TI+ ++ IK++P+D ++ + D V+++G + +
Sbjct: 131 GSCGGIIGKGGVTIRSFIEDSQAGIKISPQD-----NNYYGQNDRLVMLTG---TFDEQM 182
Query: 209 FAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSIL 268
AI I+ K + ED P + P PG + + + +PS+
Sbjct: 183 RAIELIVSKLA--ED-----------PHYAQSMNSPFSYPGVYFSGYQGVPYTYVLPSVA 229
Query: 269 GAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGG 328
A + N P + G L + +S L + V IG V+G+GG
Sbjct: 230 PPA--------YNAVNYRPNGTAGGKLQNS--KEERSNSLTMGVAD--EHIGLVVGRGGR 277
Query: 329 TIKSIRQASGAQIDVDDTKD 348
I I Q SGA+I + D D
Sbjct: 278 NIMEISQVSGARIKISDRGD 297
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 383 DEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEV 442
D ++ IR LVS+ G +IGK GS I + + ++ A +++S+ + D ++ V
Sbjct: 30 DSEEKPTYIRFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSR-NHEFFPGTTDRIIMV 88
Query: 443 VGEVGSVRDALVQIILRLRDDALKDRDGSRNP 474
G + ++ A+ I+ +L + + D P
Sbjct: 89 SGAINEIQRAVELILSKLLSELHSEDDNDAEP 120
Score = 38.9 bits (89), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Query: 553 PLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS---SRGDRVALISGT-PE 608
P + LV +A G VIGK GS + + + SGA I++S + DR+ ++SG E
Sbjct: 35 PTYIRFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSRNHEFFPGTTDRIIMVSGAINE 94
Query: 609 QKRAAENLIQAFI 621
+RA E ++ +
Sbjct: 95 IQRAVELILSKLL 107
>gi|118792630|ref|XP_320427.3| AGAP012103-PA [Anopheles gambiae str. PEST]
gi|116116989|gb|EAA00333.3| AGAP012103-PA [Anopheles gambiae str. PEST]
Length = 494
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 143/319 (44%), Gaps = 46/319 (14%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSM 369
+RVL +G +IG+ G TI+ I Q S A++DV KDN +T +P++ +M
Sbjct: 67 LRVLVQSEMVGAIIGRQGSTIRHITQQSRARVDVHR-KDNVGSVEKAITIYGNPENC-TM 124
Query: 370 AVEAVL-LLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGD 428
A + +L ++Q + N + + +++L + +IG IIGKSG+ I I + T + +S +
Sbjct: 125 ACKKILEVMQQEANSTNKGEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITVSSIN 184
Query: 429 KPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSGTGI 488
+ + ++ V G + ++ QI +LR D
Sbjct: 185 DISSFNL-ERIITVKGSIENMSKGESQISAKLRQSYENDLQ------------------- 224
Query: 489 SMPPLLPSIPPVGPLGYDQRADSGSGI-GMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLY 547
++ P P + P+ A +G G G + ++ GS + G +Y
Sbjct: 225 ALAPQTIMFPGLHPMAMMSTAGNGMGFTGRTAGATASASGSGATG-------------MY 271
Query: 548 GGLPPPL----TLEVLVPANAVGKVIGKAGSNLANIRKISGATI-----EMSDSKSSRGD 598
G P+ T + +P NAVG +IG G ++ NI + SGA++ E + + +
Sbjct: 272 PGSNFPIEVQETTYLYIPNNAVGAIIGTKGLHIRNIIRFSGASVKIAPLEADKPQEQQTE 331
Query: 599 RVALISGTPEQKRAAENLI 617
R I GTPE + A+ LI
Sbjct: 332 RKVTIIGTPEAQWKAQYLI 350
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 109/431 (25%), Positives = 178/431 (41%), Gaps = 86/431 (19%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDP-FPGAKDRVVTIYSHVKDKEDVEV 98
R+L ++G++IG+ G I I Q++RARV V G+ ++ +TIY
Sbjct: 68 RVLVQSEMVGAIIGRQGSTIRHITQQSRARVDVHRKDNVGSVEKAITIYG---------- 117
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEEC-QILVPSSQSANIIGK 157
+ E A +L+V AN+ + E C +IL ++ IIGK
Sbjct: 118 -----NPENCTMACKKILEVMQQEANST----------NKGEICLKILAHNNLIGRIIGK 162
Query: 158 AGATIKRLRSKTRTSIKVTP-KDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMY 216
+G TIKR+ T T I V+ D S + + + + G E + K ISA +
Sbjct: 163 SGNTIKRIMQDTDTKITVSSINDIS------SFNLERIITVKGSIENMSKGESQISAKLR 216
Query: 217 KFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDL 276
+ + L AP +I+ P GL+P A + S G
Sbjct: 217 QSYENDLQAL------APQTIMFP---------GLHPMA--------MMSTAG------- 246
Query: 277 QGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRV------LCPFNKIGRVIGKGGGTI 330
G TG T +T + SG G I V P N +G +IG G I
Sbjct: 247 NGMGFTGRT--AGATASASGSGATGMYPGSNFPIEVQETTYLYIPNNAVGAIIGTKGLHI 304
Query: 331 KSIRQASGAQIDV---DDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKINDE--- 384
++I + SGA + + + K + VT I +P+ +A L+ K+ +E
Sbjct: 305 RNIIRFSGASVKIAPLEADKPQEQQTERKVTIIGTPE----AQWKAQYLIFEKMREEGFV 360
Query: 385 ---DDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVE 441
DD +T+ + V S +G IIGK G + E+++ T + +++ + D + V
Sbjct: 361 SGTDDVRLTVEIFVPSAQVGRIIGKGGQNVRELQRVTGSIIKLPEHTASAPVD-EETTVH 419
Query: 442 VVGEVGSVRDA 452
++G SV+ A
Sbjct: 420 IIGPFFSVQSA 430
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 31/42 (73%)
Query: 554 LTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSS 595
LT+E+ VP+ VG++IGK G N+ +++++G+ I++ + +S
Sbjct: 368 LTVEIFVPSAQVGRIIGKGGQNVRELQRVTGSIIKLPEHTAS 409
>gi|224115590|ref|XP_002332094.1| predicted protein [Populus trichocarpa]
gi|222874914|gb|EEF12045.1| predicted protein [Populus trichocarpa]
Length = 460
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 154/354 (43%), Gaps = 54/354 (15%)
Query: 38 IYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVE 97
++R++ P +GS+IG+ G+++ + ETRAR+++++ G DR+V I KE+ E
Sbjct: 54 VFRLIVPVSKVGSIIGRKGELVKKMCDETRARIRILEGPLGITDRIVLI----SGKEEPE 109
Query: 98 VDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEE-----CQI--LVPSSQ 150
PL A DA+L+V ++ DN C I LV SSQ
Sbjct: 110 A--------PLSPAMDAVLRVFKRVSGLSPGEGDNTGSAAAAAAAGSAFCSIRLLVASSQ 161
Query: 151 SANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFA 210
+ N+IGK G+ IK ++ T ++V +D PT++ + E V I GE+ V KAL A
Sbjct: 162 AINLIGKQGSIIKSIQENTGVVVRVMAED-DIPTYATSDE--RIVEIHGEAMKVFKALEA 218
Query: 211 ISAIMYKFSPRED-IPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSI-- 267
+ + KF IP+ A S+ P+D NA P L S P+
Sbjct: 219 VIGHLRKFLVDHSVIPIFEKTYNATISLERPAD-------ACADNAQPSL--HSAPAFSS 269
Query: 268 -------LGAARVPDLQGYADTGNTWPVYSTGLSLVS--GLVGASQS----------EEL 308
L R P + + +T + G SL GLVG + ++
Sbjct: 270 GIISDYSLSLKRDPSIYEH-ETHFEHKISQPGFSLYGDPGLVGLRSTGLGRATAPIVTQV 328
Query: 309 VIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIES 362
+ P + +IG G I IR+ SGA + + +++ DE + + S
Sbjct: 329 TQTMQVPLSYAEDIIGVAGSNIAYIRRTSGAILSIQESRGLPDEITVEIKGTSS 382
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 160/352 (45%), Gaps = 49/352 (13%)
Query: 309 VIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKS 368
V R++ P +K+G +IG+ G +K + + A+I + + + ++ ++ E P+ S
Sbjct: 54 VFRLIVPVSKVGSIIGRKGELVKKMCDETRARIRILEGPLGITDRIVLISGKEEPEAPLS 113
Query: 369 MAVEAVLLLQTKIN----DEDDDT-------------VTIRLLVSSKVIGCIIGKSGSII 411
A++AVL + +++ E D+T +IRLLV+S +IGK GSII
Sbjct: 114 PAMDAVLRVFKRVSGLSPGEGDNTGSAAAAAAAGSAFCSIRLLVASSQAINLIGKQGSII 173
Query: 412 NEIRKRTKADVRI-SKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDG 470
I++ T VR+ ++ D P A +++ +VE+ GE V AL +I LR + D
Sbjct: 174 KSIQENTGVVVRVMAEDDIPTYATSDERIVEIHGEAMKVFKALEAVIGHLRKFLV---DH 230
Query: 471 SRNPPVGADHIYSSGTGISMP---------PLLPSIPPVGPLGYDQRADSGSGIGMLSSS 521
S P + Y++ + P P L S P + S + +
Sbjct: 231 SVIPIF--EKTYNATISLERPADACADNAQPSLHSAP-----AFSSGIISDYSLSLKRDP 283
Query: 522 SLYGYGSL------SMGDSPYG--SMSSYSSKLYGGLPPPLTLEVL----VPANAVGKVI 569
S+Y + + G S YG + S G P+ +V VP + +I
Sbjct: 284 SIYEHETHFEHKISQPGFSLYGDPGLVGLRSTGLGRATAPIVTQVTQTMQVPLSYAEDII 343
Query: 570 GKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFI 621
G AGSN+A IR+ SGA + + +S+ + I GT Q + A+ LIQ FI
Sbjct: 344 GVAGSNIAYIRRTSGAILSIQESRGLPDEITVEIKGTSSQVQMAQQLIQEFI 395
>gi|242020720|ref|XP_002430800.1| predicted protein [Pediculus humanus corporis]
gi|212515997|gb|EEB18062.1| predicted protein [Pediculus humanus corporis]
Length = 515
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 146/321 (45%), Gaps = 43/321 (13%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSM 369
+R+L + +G +IG+ G TI+ I Q + A++DV KDN +T +PD+ +
Sbjct: 116 LRILVQSDMVGAIIGRQGTTIRQITQQTRARVDVHR-KDNVGSLEKAITIYGNPDNCTNA 174
Query: 370 AVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDK 429
+ + ++Q + ++ + +++++L + +IG IIGK G+ I I + T + + +S +
Sbjct: 175 CKKILEVMQAEASNTNKGEISLKILAHNNLIGRIIGKGGNTIKRIMQDTDSKITVSSIND 234
Query: 430 PKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSGTGIS 489
+ + ++ V G + ++ A +I +LR D +
Sbjct: 235 INSFNL-ERIITVKGTIDNMSRAESEISAKLRQSYENDLQ-------------------A 274
Query: 490 MPP---LLPSIPPVG-----PLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSS 541
M P + P + P+ +GY R + G+ YG G+ Y
Sbjct: 275 MAPQTMMFPGLHPMAMMSTNNMGYSSRPGAFGGV--------YGSGAPIPYSPIYPPAGP 326
Query: 542 YSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRG---- 597
GG T + +P +AVG +IG G+++ NI + SGA+++++ + +G
Sbjct: 327 QQGPSQGGDSQETTF-LFIPNSAVGAIIGTKGTHIRNIIRFSGASVKIASLEQEKGTEPP 385
Query: 598 -DRVALISGTPEQKRAAENLI 617
+R I GTPE + A+ LI
Sbjct: 386 AERKVTIVGTPESQWKAQYLI 406
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 103/437 (23%), Positives = 181/437 (41%), Gaps = 95/437 (21%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDP-FPGAKDRVVTIYSHVKDKEDVEV 98
RIL ++G++IG+ G I I Q+TRARV V G+ ++ +TIY + +
Sbjct: 117 RILVQSDMVGAIIGRQGTTIRQITQQTRARVDVHRKDNVGSLEKAITIYGNPDN------ 170
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
C +A K+ + +N + K IL ++ IIGK
Sbjct: 171 ----------CT--NACKKILEVMQAEASNTNKGEISLK------ILAHNNLIGRIIGKG 212
Query: 159 GATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKF 218
G TIKR+ T + I V S + + + + G + + +A ISA + +
Sbjct: 213 GNTIKRIMQDTDSKITV-----SSINDINSFNLERIITVKGTIDNMSRAESEISAKLRQ- 266
Query: 219 SPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQG 278
S D+ AP +++ P GL+P A ++ + ++ G
Sbjct: 267 SYENDLQA-----MAPQTMMFP---------GLHPMA--MMSTNNM-------------G 297
Query: 279 YADT-GNTWPVYSTGLSLVSGLV--------GASQ---SEELVIRVLCPFNKIGRVIGKG 326
Y+ G VY +G + + G SQ S+E + P + +G +IG
Sbjct: 298 YSSRPGAFGGVYGSGAPIPYSPIYPPAGPQQGPSQGGDSQETTF-LFIPNSAVGAIIGTK 356
Query: 327 GGTIKSIRQASGAQIDV---DDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKIND 383
G I++I + SGA + + + K VT + +P+ +A L+ K+ +
Sbjct: 357 GTHIRNIIRFSGASVKIASLEQEKGTEPPAERKVTIVGTPES----QWKAQYLIFEKMRE 412
Query: 384 E-------DDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRI-SKGDKPKCADA 435
E DD +T+ +LV G IIGK G + E++ T + +++ +G P +
Sbjct: 413 EGFIGSGNDDVKLTVEILV-----GRIIGKGGQNVRELQHATGSIIKLPEQGAAPPAQE- 466
Query: 436 NDELVEVVGEVGSVRDA 452
+ V ++G SV+ A
Sbjct: 467 -ETTVHIIGPFFSVQSA 482
>gi|47222225|emb|CAG11104.1| unnamed protein product [Tetraodon nigroviridis]
Length = 580
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 145/314 (46%), Gaps = 29/314 (9%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSM 369
+R+L P +G +IGK G TI+++ + + ++ID+ K+N +T +P+ S
Sbjct: 169 LRMLVPTQFVGAIIGKQGDTIRNLTKQTHSKIDIHR-KENAGAAEKPITIHSTPEG-SSN 226
Query: 370 AVEAVLLLQTK--INDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKG 427
A ++ + K I+ + + + +++LV + +G +IGK G + +I + T + IS
Sbjct: 227 ACRTIMDIMQKEAIDTKFTEEIPLKILVHNNFVGRLIGKEGRNLKKIEQDTGTKITISSL 286
Query: 428 DKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSGTG 487
+ + + V G + + A +++ ++R+ D V A ++ S+
Sbjct: 287 QDLTLYNP-ERTITVKGSIEACGRAEEEVMKKIREAYESD--------VAAMNLQSN--- 334
Query: 488 ISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYG-------SMS 540
L+P + + LG G G M S +G S G SPYG SM
Sbjct: 335 -----LIPGLN-LNALGLFPSGSPGMGPSMSSVPPPGAHGGCSFGCSPYGVEGPLWASMM 388
Query: 541 SYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRV 600
S S + G P T+ + +P AVG +IGK G ++ + +GA+I+ S R+
Sbjct: 389 SASGQTLAGSPESETVHLFIPTLAVGAIIGKQGQHIKQLSHFAGASIKASRKGMDPKHRM 448
Query: 601 ALISGTPEQKRAAE 614
+I G PE + A+
Sbjct: 449 VIIVGPPEAQFKAQ 462
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 95/422 (22%), Positives = 173/422 (40%), Gaps = 68/422 (16%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKEDVEV 98
R+L P +G++IGK G I ++ ++T +++ + GA ++ +TI+S + +
Sbjct: 170 RMLVPTQFVGAIIGKQGDTIRNLTKQTHSKIDIHRKENAGAAEKPITIHSTPEGSSNA-- 227
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
C +++ A D K E+ +ILV ++ +IGK
Sbjct: 228 ----------CRTIMDIMQKEAI-----------DTKFTEEIPLKILVHNNFVGRLIGKE 266
Query: 159 GATIKRLRSKTRTSIKVTP-KDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYK 217
G +K++ T T I ++ +D + + + + G EA +A +M K
Sbjct: 267 GRNLKKIEQDTGTKITISSLQDLT------LYNPERTITVKGSIEACGRAE---EEVMKK 317
Query: 218 FSPREDIPLETTVREAPPSIIIPSDVPIYPPG------GLYPNADPIL-PSRSV---PSI 267
RE + ++I PG GL+P+ P + PS S P
Sbjct: 318 I--REAYESDVAAMNLQSNLI---------PGLNLNALGLFPSGSPGMGPSMSSVPPPGA 366
Query: 268 LGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGG 327
G G + G P++++ +S SG A E + + P +G +IGK G
Sbjct: 367 HGGCSF----GCSPYGVEGPLWASMMS-ASGQTLAGSPESETVHLFIPTLAVGAIIGKQG 421
Query: 328 GTIKSIRQASGAQIDVDDT-KDNRDECVITVTAIESPDDIKSMA-VEAVLLLQTKINDED 385
IK + +GA I D + VI V E+ K+ + L + ++
Sbjct: 422 QHIKQLSHFAGASIKASRKGMDPKHRMVIIVGPPEA--QFKAQCRIFGKLKEENFFGPKE 479
Query: 386 DDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDE-LVEVVG 444
+ + + V S G +IGK G +NE++ T A+V + + P D D+ +V+++G
Sbjct: 480 EVKLEAHIKVPSFAAGRVIGKGGKTVNELQNLTCAEVVVPRDQTP---DEKDQVIVKIIG 536
Query: 445 EV 446
Sbjct: 537 HF 538
Score = 40.0 bits (92), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 56/150 (37%), Gaps = 23/150 (15%)
Query: 32 GNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVK 91
G+ ES + P +G++IGK G+ I + A +K K R+V I
Sbjct: 397 GSPESETVHLFIPTLAVGAIIGKQGQHIKQLSHFAGASIKASRKGMDPKHRMVII----- 451
Query: 92 DKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQS 151
+A K I + K + K E I VPS +
Sbjct: 452 -----------------VGPPEAQFKAQCRIFGKLKEENFFGPKEEVKLEAHIKVPSFAA 494
Query: 152 ANIIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+IGK G T+ L++ T + V P+D +
Sbjct: 495 GRVIGKGGKTVNELQNLTCAEV-VVPRDQT 523
>gi|432092458|gb|ELK25073.1| Poly(rC)-binding protein 4 [Myotis davidii]
Length = 403
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 158/329 (48%), Gaps = 52/329 (15%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
L +R+L ++G +IGK G T+K IR+ S A+I + + + E + T+T
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE--GSCPERITTITGS------T 69
Query: 368 SMAVEAVLLLQTKINDEDDDT------------VTIRLLVSSKVIGCIIGKSGSIINEIR 415
+ AV ++ K+ DED + VT+RL++ + G +IGK+G+ I EIR
Sbjct: 70 AAVFHAVSMIAFKL-DEDLCSAPANGGTVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIR 128
Query: 416 KRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPP 475
+ T A V+++ P ++ + V V G V DA++ + ++ L+ +PP
Sbjct: 129 ETTGAQVQVAGDLLP---NSTERAVTVSG----VPDAIILCVRQICAVILE------SPP 175
Query: 476 VGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSP 535
GA Y +S+ +L L +Q S G ++ + + LS P
Sbjct: 176 KGATIPYHPS--LSLGTVL--------LSANQGFSVQSQYGGVTPAEVTKLQQLSGHAVP 225
Query: 536 YGSMSSYSSKLYGGLPPPL---TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDS 592
+GS S + GL P + E LVP + +G VIG+ GS ++ IR++SGA I++ +
Sbjct: 226 FGSPS-----MVPGLDPGAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQ 280
Query: 593 KSSRGDRVALISGTPEQKRAAENLIQAFI 621
G+R I+G+P A+ LI A +
Sbjct: 281 AEGAGERHVTITGSPVSIALAQYLITACL 309
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 136/325 (41%), Gaps = 51/325 (15%)
Query: 36 SVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKED 95
++ R+L +GS+IGK G+ + IR+++ AR+ + + +R+ TI
Sbjct: 17 TLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGSTAAVFH 74
Query: 96 VEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANII 155
F E LC+A + + ++++P+SQ ++I
Sbjct: 75 AVSMIAFKLDEDLCSA-----------------PANGGTVSRPPVTLRLVIPASQCGSLI 117
Query: 156 GKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIM 215
GKAG IK +R T ++V T + V +SG +A+ + I A++
Sbjct: 118 GKAGTKIKEIRETTGAQVQVAGDLLPNST-------ERAVTVSGVPDAIILCVRQICAVI 170
Query: 216 YKFSPR-EDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVP 274
+ P+ IP PS+ + G + +A+ +S + A V
Sbjct: 171 LESPPKGATIPYH-------PSLSL---------GTVLLSANQGFSVQSQYGGVTPAEVT 214
Query: 275 DLQGYADTGNTWPVYSTGLSLVSGL-VGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSI 333
LQ +G+ P S S+V GL GA S + L P + IG VIG+ G I I
Sbjct: 215 KLQQL--SGHAVPFGSP--SMVPGLDPGAQTSSQ---EFLVPNDLIGCVIGRQGSKISEI 267
Query: 334 RQASGAQIDVDDTKDNRDECVITVT 358
RQ SGA I + + + E +T+T
Sbjct: 268 RQMSGAHIKIGNQAEGAGERHVTIT 292
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 384 EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVV 443
E T+T+R+L+ K +G IIGK G + IR+++ A + IS+G P + + +
Sbjct: 13 ELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCP------ERITTIT 66
Query: 444 GEVGSVRDALVQIILRLRDD 463
G +V A+ I +L +D
Sbjct: 67 GSTAAVFHAVSMIAFKLDED 86
>gi|12597878|gb|AAG60186.1|AC084763_6 putative nucleic acid binding protein [Oryza sativa Japonica Group]
gi|31433543|gb|AAP55041.1| KH domain-containing protein, putative, expressed [Oryza sativa
Japonica Group]
gi|125532979|gb|EAY79544.1| hypothetical protein OsI_34673 [Oryza sativa Indica Group]
gi|125575714|gb|EAZ16998.1| hypothetical protein OsJ_32483 [Oryza sativa Japonica Group]
gi|215769329|dbj|BAH01558.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 458
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 103/184 (55%), Gaps = 17/184 (9%)
Query: 38 IYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVE 97
++R++ P +GS+IG+ G++I + +ET+A+V+V++ GA +R+V V KED
Sbjct: 57 VFRLVVPVLKVGSIIGRKGELIKRLVEETKAKVRVLEGPVGATERIVL----VSGKEDPA 112
Query: 98 VDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEEC--QILVPSSQSANII 155
++ L A DAL++V ++ A + + C ++LVP +Q+ N+I
Sbjct: 113 LE--------LPPAMDALMRVFKRVSGITDGAAEGTQAATAPGVCAARLLVPGAQAINLI 164
Query: 156 GKAGATIKRLRSKTRTSIKVTPKDASE-PTHSCAMEFDNFVLISGESEAVKKALFAISAI 214
GK GA+IK ++ T +I+V D E P + +E + V I GE+E V KAL A+S
Sbjct: 165 GKQGASIKAIQEGTGATIRVISIDERERPFY--VIEDERIVEIQGETEKVLKALQAVSNH 222
Query: 215 MYKF 218
+ KF
Sbjct: 223 LRKF 226
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 144/347 (41%), Gaps = 45/347 (12%)
Query: 309 VIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKS 368
V R++ P K+G +IG+ G IK + + + A++ V + E ++ V+ E P
Sbjct: 57 VFRLVVPVLKVGSIIGRKGELIKRLVEETKAKVRVLEGPVGATERIVLVSGKEDPALELP 116
Query: 369 MAVEAVLLLQTKINDEDDDTV------------TIRLLVSSKVIGCIIGKSGSIINEIRK 416
A++A++ + +++ D RLLV +IGK G+ I I++
Sbjct: 117 PAMDALMRVFKRVSGITDGAAEGTQAATAPGVCAARLLVPGAQAINLIGKQGASIKAIQE 176
Query: 417 RTKADVR---ISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLR----DDALKDRD 469
T A +R I + ++P ++ +VE+ GE V AL + LR D ++
Sbjct: 177 GTGATIRVISIDERERPFYVIEDERIVEIQGETEKVLKALQAVSNHLRKFLVDHSVLPLF 236
Query: 470 GSRNPPVGADHIYSSGTGISMPPLLPSI----PPVG-----PLGYDQRADSGSGIGMLSS 520
N V D + T IS P ++ + PPV P+ D L
Sbjct: 237 EKTNATVTQDRSTDAWTDISHPSIVSAQINQPPPVVDEYILPMKRDPL--------FLER 288
Query: 521 SSLYGYGSLSMGDSPYGSMSSYSSKLYGGL---------PPPLTLEVLVPANAVGKVIGK 571
L + G S YG + S+ G+ +T + +P +IG
Sbjct: 289 EPLIDHNIHRSGVSLYGRDPALSTLRTSGIHGGGPGGPLLSQITQTMQIPLTYAEDIIGV 348
Query: 572 AGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQ 618
G+N+A IR SGA + + +S S D + GT Q +AA LIQ
Sbjct: 349 KGANIAYIRANSGAVVTIQESLGSPDDITVEMKGTSSQVQAAYQLIQ 395
>gi|449265657|gb|EMC76819.1| Poly(rC)-binding protein 3 [Columba livia]
Length = 343
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 146/334 (43%), Gaps = 30/334 (8%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
L IR+L ++G +IGK G T+K +R+ SGA+I++ + C + I P D
Sbjct: 17 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE-----GSCPERIVTITGPTDAI 71
Query: 368 SMAVEAVLL-LQTKINDEDDDT-------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
A + L + IN ++ VT+RL+V + G +IGK GS I EIR+ T
Sbjct: 72 FKAFSMIALKFEEDINASMTNSTVTSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 131
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGAD 479
A V+++ P ++ + V + G ++ + QI + + + K P +
Sbjct: 132 AQVQVAGDMLP---NSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASA 188
Query: 480 HIYSSGTGISMPPLLPSIPPVGPLGYDQRAD------------SGSGIGMLSSSSLYGYG 527
I +G + +L S L D + G + L
Sbjct: 189 PIIFAGGQVRADTILASAGNHTELRLSYLTDLCLNCACCFQAFTIQGQYAIPHPDLTKLH 248
Query: 528 SLSMGDSPYGSMSSYSSKLYG--GLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGA 585
L+M P+ + + G P + E+ +P + +G +IG+ GS + IR++SGA
Sbjct: 249 QLAMQHPPFTPLGQTTPGFPGLDATTPTSSHELTIPNDLIGCIIGRQGSKINEIRQMSGA 308
Query: 586 TIEMSDSKSSRGDRVALISGTPEQKRAAENLIQA 619
I+++++ +R I+G+P A+ LI A
Sbjct: 309 QIKIANATEGSAERQVTITGSPANISLAQYLINA 342
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 96/381 (25%), Positives = 151/381 (39%), Gaps = 87/381 (22%)
Query: 25 INEKDEKGNEE----SVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAK 80
+N KD K E ++ R+L +GS+IGK G+ + +R+E+ AR+ + +
Sbjct: 1 MNTKDTKATEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--SCP 58
Query: 81 DRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIA-----NAVANATDNDKK 135
+R+VTI DA+ K + IA + A+ T++
Sbjct: 59 ERIVTIT----------------------GPTDAIFKAFSMIALKFEEDINASMTNSTVT 96
Query: 136 RKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFV 195
K +++VP+SQ ++IGK G+ IK +R T ++V T + V
Sbjct: 97 SKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNST-------ERAV 149
Query: 196 LISGESEAVKKALFAISAIMYKFSPR-EDIPLETTVREAPPSIIIPSDVPIYPPGGLYPN 254
ISG +A+ + + I +M + P+ IP P+ PI GG
Sbjct: 150 TISGTPDAIIQCVKQICVVMLESPPKGATIPYRPK----------PASAPIIFAGGQV-R 198
Query: 255 ADPILPSR----------------------SVPSILGAARV--PDLQGYADTGNTWPVYS 290
AD IL S +I G + PDL P ++
Sbjct: 199 ADTILASAGNHTELRLSYLTDLCLNCACCFQAFTIQGQYAIPHPDLTKLHQLAMQHPPFT 258
Query: 291 TGLSLVSGLVGA-----SQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDD 345
G G + S EL I P + IG +IG+ G I IRQ SGAQI + +
Sbjct: 259 PLGQTTPGFPGLDATTPTSSHELTI----PNDLIGCIIGRQGSKINEIRQMSGAQIKIAN 314
Query: 346 TKDNRDECVITVTAIESPDDI 366
+ E +T+T SP +I
Sbjct: 315 ATEGSAERQVTITG--SPANI 333
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+TIRLL+ K +G IIGK G + ++R+ + A + IS+G P + +V + G
Sbjct: 16 TLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGSCP------ERIVTITGPTD 69
Query: 448 SVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
++ A I L+ +D ++ + + PPV
Sbjct: 70 AIFKAFSMIALKFEEDINASMTNSTVTSKPPV 101
>gi|449442959|ref|XP_004139248.1| PREDICTED: poly(rC)-binding protein 3-like [Cucumis sativus]
Length = 483
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 100/194 (51%), Gaps = 15/194 (7%)
Query: 25 INEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVV 84
++EK G ++R+L P +GS+IG+ G+ I I +ETRAR+K++D PG +R V
Sbjct: 73 VSEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAV 132
Query: 85 TIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQI 144
+ + KD+ D A D LL+VH I + + + K ++
Sbjct: 133 MVSA--KDEPD----------SAFPPAVDGLLRVHKRIVDGLEGDNAHAPNAGSKVSTRL 180
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAV 204
LV +SQ+ ++IGK G T+K ++ ++ ++V SE A++ D V + G+ V
Sbjct: 181 LVAASQAGSLIGKQGGTVKSIQEESNCIVRVL---GSEDLPVFALQDDRVVEVLGDPAGV 237
Query: 205 KKALFAISAIMYKF 218
KA+ I++ + KF
Sbjct: 238 HKAVELIASHLRKF 251
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 84/166 (50%), Gaps = 11/166 (6%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
E V R+L P K+G +IG+ G IK I + + A+I + D E + V+A + PD
Sbjct: 84 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMVSAKDEPDSA 143
Query: 367 KSMAVEAVLLLQTKIND--EDDDT--------VTIRLLVSSKVIGCIIGKSGSIINEIRK 416
AV+ +L + +I D E D+ V+ RLLV++ G +IGK G + I++
Sbjct: 144 FPPAVDGLLRVHKRIVDGLEGDNAHAPNAGSKVSTRLLVAASQAGSLIGKQGGTVKSIQE 203
Query: 417 RTKADVRI-SKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLR 461
+ VR+ D P A +D +VEV+G+ V A+ I LR
Sbjct: 204 ESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHLR 249
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 53/89 (59%)
Query: 533 DSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDS 592
++P G ++ +++ + T ++ +P + VIG AG++++ IR+ SGAT+ + ++
Sbjct: 342 EAPMGVHAASNAQSAPSIVTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQET 401
Query: 593 KSSRGDRVALISGTPEQKRAAENLIQAFI 621
+ G+ +SGT Q +AA+ LIQ F+
Sbjct: 402 RGVPGEMTVEMSGTASQVQAAQQLIQNFM 430
>gi|432906521|ref|XP_004077571.1| PREDICTED: poly(rC)-binding protein 3-like [Oryzias latipes]
Length = 434
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 143/325 (44%), Gaps = 40/325 (12%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTA-----IES 362
L +R+L ++G +IGK G T+K +R+ SGA+I++ + + E ++T+T +
Sbjct: 17 LTLRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GSSPERIVTITGPTEGIFRA 74
Query: 363 PDDIKSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADV 422
I E + T N VT+RL+ G +IGK GS I EIR+ T A V
Sbjct: 75 FSMIAQKFEEDITAAMTNSNVTSKPPVTLRLVFPGSQCGSLIGKGGSKIKEIRETTGAQV 134
Query: 423 RISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIY 482
+++ P D+ + V + G A+ Q + + L+ +PP GA
Sbjct: 135 QVAGDMLP---DSTERAVTISG----TPQAITQCVRHICSVMLE------SPPKGAT--- 178
Query: 483 SSGTGISMPPLLPSIPPVGPLG-----YDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYG 537
P P I P G + A + G + L L+M P
Sbjct: 179 --------IPYRPKILPAGAHAVLAPQHSAHAFAIPGQYAFAHQDLTKLHQLAMQHIPLP 230
Query: 538 SMSSYSSKLYGGL---PPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS 594
S+ S+ + GL T E+ +P + +G +IG+ GS + IR++SGA I+++ +
Sbjct: 231 SLGQ-SNPTFPGLDSSASTSTQELAIPNDLIGCIIGRQGSKINEIRQVSGAHIKIASATD 289
Query: 595 SRGDRVALISGTPEQKRAAENLIQA 619
R I+G+P A+ LI A
Sbjct: 290 GSAVRQVTITGSPASISIAQYLINA 314
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 82/363 (22%), Positives = 149/363 (41%), Gaps = 59/363 (16%)
Query: 25 INEKDEKGNEESV----IYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAK 80
+++K+E ++ S+ R+L +GS+IGK G+ + +R+E+ AR+ + + +
Sbjct: 1 MSDKEEMASDGSLNVTLTLRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--SSP 58
Query: 81 DRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAV-----ANATDNDKK 135
+R+VTI + + + + IA A T+++
Sbjct: 59 ERIVTI----------------------TGPTEGIFRAFSMIAQKFEEDITAAMTNSNVT 96
Query: 136 RKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFV 195
K +++ P SQ ++IGK G+ IK +R T ++V + T + V
Sbjct: 97 SKPPVTLRLVFPGSQCGSLIGKGGSKIKEIRETTGAQVQVAGDMLPDST-------ERAV 149
Query: 196 LISGESEAVKKALFAISAIMYKFSPR-EDIPLETTVREA-PPSIIIPSD-VPIYPPGGLY 252
ISG +A+ + + I ++M + P+ IP + A +++ P + G Y
Sbjct: 150 TISGTPQAITQCVRHICSVMLESPPKGATIPYRPKILPAGAHAVLAPQHSAHAFAIPGQY 209
Query: 253 PNADPILPSRSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRV 312
A L L +P L + T+P + S + ++EL I
Sbjct: 210 AFAHQDLTKLHQ---LAMQHIP-LPSLGQSNPTFPGLDSSAS--------TSTQELAI-- 255
Query: 313 LCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVE 372
P + IG +IG+ G I IRQ SGA I + D +T+T + I +
Sbjct: 256 --PNDLIGCIIGRQGSKINEIRQVSGAHIKIASATDGSAVRQVTITGSPASISIAQYLIN 313
Query: 373 AVL 375
A L
Sbjct: 314 ASL 316
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 9/92 (9%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+T+RLL+ K +G IIGK G + ++R+ + A + IS+G P + +V + G
Sbjct: 16 TLTLRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGSSP------ERIVTITGPTE 69
Query: 448 SVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
+ A I + +D A+ + + + PPV
Sbjct: 70 GIFRAFSMIAQKFEEDITAAMTNSNVTSKPPV 101
>gi|296189557|ref|XP_002742821.1| PREDICTED: poly(rC)-binding protein 1 isoform 1 [Callithrix
jacchus]
Length = 375
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 95/346 (27%), Positives = 156/346 (45%), Gaps = 49/346 (14%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
L IR+L ++G +IGK G ++K IR+ SGA+I + + N E +IT+T P +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIRKESGARIKI--LEGNCPERIITLTG---PTNAI 68
Query: 368 SMAVEAVLL-LQTKINDEDDDT------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTKA 420
A ++ L+ IN + VT+RL+V + G +IGK G I EIRK T A
Sbjct: 69 FKAFAMIIYKLEEDINSSMTKSTAASRLVTLRLVVPATQCGSLIGKGGCKIKEIRKSTGA 128
Query: 421 DVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDG---------- 470
V+++ P ++ + + + G SV + QI L + + G
Sbjct: 129 QVQVAGDMLP---NSTERAITIAGVPQSVTKCVKQICLVMLETLSHSPQGKVKTILYQPM 185
Query: 471 -SRNPPV---GADHI-----YSSGTG-ISMPPL-------LPSIPPVGPLGYDQRADSGS 513
SR+P G D Y T + PPL +I P+ +Q A S
Sbjct: 186 PSRSPVTCAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISPLNLAKLNQVARQQS 245
Query: 514 GIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAG 573
M+ + G+ + DS + Y + L +T E+ +P N +G +IG+ G
Sbjct: 246 HFAMMHGGT--GFAGI---DSSSPEVKGYWASLDAS--TQITHELTIPNNLIGCIIGRQG 298
Query: 574 SNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQA 619
+N+ IR++SGA I++++ R I+G+ A+ LI+A
Sbjct: 299 TNINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLIKA 344
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 85/378 (22%), Positives = 150/378 (39%), Gaps = 70/378 (18%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH 89
E G ++ R+L +GS+IGK G+ + IR+E+ AR+K+++ +R++T
Sbjct: 7 ESGLNVTLTIRLLMHGKEVGSIIGKKGESVKRIRKESGARIKILEG--NCPERIIT---- 60
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEE----CQIL 145
L +A+ K A I + ++ + +++
Sbjct: 61 ------------------LTGPTNAIFKAFAMIIYKLEEDINSSMTKSTAASRLVTLRLV 102
Query: 146 VPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVK 205
VP++Q ++IGK G IK +R T ++V T + + I+G ++V
Sbjct: 103 VPATQCGSLIGKGGCKIKEIRKSTGAQVQVAGDMLPNST-------ERAITIAGVPQSVT 155
Query: 206 KALFAISAIMYK---FSPREDIPLETTVREAPPSIIIPSDVPIYPPGGL--------YPN 254
K + I +M + SP+ + T+ P +PS P+ GG YP+
Sbjct: 156 KCVKQICLVMLETLSHSPQGKV---KTILYQP----MPSRSPVTCAGGQDRCSDAAGYPH 208
Query: 255 ADPIL--PSRSVPSILGAARV-----PDLQGYADTGNTWPVYSTGLSL---------VSG 298
A L P SI G + L A + + + G V G
Sbjct: 209 ATHDLEGPPLDAYSIQGQHTISPLNLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKG 268
Query: 299 LVGA-SQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITV 357
+ S ++ + P N IG +IG+ G I IRQ SGAQI + + + +T+
Sbjct: 269 YWASLDASTQITHELTIPNNLIGCIIGRQGTNINEIRQMSGAQIKIANPVEGSSGRQVTI 328
Query: 358 TAIESPDDIKSMAVEAVL 375
T + + ++A L
Sbjct: 329 TGSAASISLAQYLIKARL 346
>gi|449266969|gb|EMC77947.1| Insulin-like growth factor 2 mRNA-binding protein 2, partial
[Columba livia]
Length = 522
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 157/338 (46%), Gaps = 51/338 (15%)
Query: 301 GASQSEELV--IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
G+SQ ++L +R+L P +G +IGK G TIK++ + + +++D+ K+N +T
Sbjct: 106 GSSQPKQLEFPLRMLVPTQFVGAIIGKEGLTIKNLTKQTQSKVDIHR-KENAGAAEKPIT 164
Query: 359 AIESPDDIKSMAVEAVLLLQTKINDEDD--DTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
+P+ S A +L + K DE + + +++L + ++G +IGK G + +I +
Sbjct: 165 IHATPEGC-SEACRMILDIMQKEADETKSAEEIPLKILAHNSLVGRLIGKEGRNLKKIEQ 223
Query: 417 RTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKD-----RDGS 471
T + IS + + + V G + A V+I+ +LR+ D + +
Sbjct: 224 DTGTKITISPLQDLTIYNP-ERTITVKGSTEACSKAQVEIMKKLREAYENDVVAVNQQAN 282
Query: 472 RNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSM 531
P + + + TG+SM LPS P G +++ Y
Sbjct: 283 LIPGLNLNALGIFSTGLSM---LPSTP-----------------GARGAAAATPY----- 317
Query: 532 GDSPYGSMSSYSSKLYGG-----------LPPPLTLEVLVPANAVGKVIGKAGSNLANIR 580
P+ S S+Y S LYG LP + + +P AVG +IGK G ++ +
Sbjct: 318 --HPFASSSAYLSGLYGAPPGSAFPHQHPLPEQEVVNLFIPTQAVGAIIGKKGQHIKQLA 375
Query: 581 KISGATIEMSDSKS-SRGDRVALISGTPEQKRAAENLI 617
+ +GA+I+++ ++ +R+ +I+G PE + A+ I
Sbjct: 376 RFAGASIKIAPAEGPDASERMVIITGPPEAQFKAQGRI 413
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 102/441 (23%), Positives = 183/441 (41%), Gaps = 86/441 (19%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKEDVEV 98
R+L P +G++IGK G I ++ ++T+++V + GA ++ +TI++
Sbjct: 118 RMLVPTQFVGAIIGKEGLTIKNLTKQTQSKVDIHRKENAGAAEKPITIHA---------- 167
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
E A +L + A ++ K E+ +IL +S +IGK
Sbjct: 168 -----TPEGCSEACRMILDIMQKEA--------DETKSAEEIPLKILAHNSLVGRLIGKE 214
Query: 159 GATIKRLRSKTRTSIKVTP-KDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYK 217
G +K++ T T I ++P +D + + + + G +EA KA IM K
Sbjct: 215 GRNLKKIEQDTGTKITISPLQDLT------IYNPERTITVKGSTEACSKAQV---EIMKK 265
Query: 218 FSPREDIPLETTVREAPPSIIIPSDVPIYPPG------GLYPNADPILPSRSVPSILGAA 271
RE + ++I PG G++ +LP S P GAA
Sbjct: 266 L--REAYENDVVAVNQQANLI---------PGLNLNALGIFSTGLSMLP--STPGARGAA 312
Query: 272 RVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQS----------EELVIRVLCPFNKIGR 321
+A + + +SGL GA E+ V+ + P +G
Sbjct: 313 AATPYHPFASSS----------AYLSGLYGAPPGSAFPHQHPLPEQEVVNLFIPTQAVGA 362
Query: 322 VIGKGGGTIKSIRQASGAQIDVDDTK--DNRDECVITVTAIESPDDIKSMA---VEAVLL 376
+IGK G IK + + +GA I + + D + VI I P + + A + L
Sbjct: 363 IIGKKGQHIKQLARFAGASIKIAPAEGPDASERMVI----ITGPPEAQFKAQGRIFGKLK 418
Query: 377 LQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADAN 436
+ N +++ + + V S G +IGK G +NE++ T A+V + + P D N
Sbjct: 419 EENFFNPKEEVKLEAHIKVPSFAAGRVIGKGGKTVNELQNLTSAEVIVPRDQTP---DEN 475
Query: 437 DE-LVEVVGEVGSVRDALVQI 456
+E +V+++G + + A +I
Sbjct: 476 EEVIVKIIGHFFASQTAQRKI 496
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 59/148 (39%), Gaps = 24/148 (16%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPF-PGAKDRVVTIYSHVKDK 93
E + + P +G++IGK G+ I + + A +K+ P A +R+V I
Sbjct: 347 EQEVVNLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAEGPDASERMVII------- 399
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
+A K I + + K + K E I VPS +
Sbjct: 400 ---------------TGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIKVPSFAAGR 444
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+IGK G T+ L++ T + + P+D +
Sbjct: 445 VIGKGGKTVNELQNLTSAEV-IVPRDQT 471
>gi|226528431|ref|NP_001149906.1| nucleic acid binding protein [Zea mays]
gi|195635381|gb|ACG37159.1| nucleic acid binding protein [Zea mays]
Length = 448
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 103/184 (55%), Gaps = 17/184 (9%)
Query: 38 IYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVE 97
++R++ P +GS+IG+ G++I + +ET+ARV++++ GA +R+V V KED +
Sbjct: 47 VFRLVVPVLKVGSIIGRKGELIKRLVEETKARVRILEGPVGATERIVL----VSGKEDPD 102
Query: 98 VDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEEC--QILVPSSQSANII 155
++ L A DAL++V + A + + + C ++LVP +Q+ N+I
Sbjct: 103 LE--------LPPAMDALMRVFKXVTGITDGAAEXTQAAATPDVCAARLLVPGAQAINLI 154
Query: 156 GKAGATIKRLRSKTRTSIKVTPKDASE-PTHSCAMEFDNFVLISGESEAVKKALFAISAI 214
GK GATIK ++ T +I+V D E P + + + V I G++E V KAL A+S
Sbjct: 155 GKQGATIKAIQESTSATIRVISVDEHERPFY--VTDDERIVEIQGDTEKVLKALQAVSNH 212
Query: 215 MYKF 218
+ KF
Sbjct: 213 LRKF 216
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 147/348 (42%), Gaps = 40/348 (11%)
Query: 309 VIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKS 368
V R++ P K+G +IG+ G IK + + + A++ + + E ++ V+ E PD
Sbjct: 47 VFRLVVPVLKVGSIIGRKGELIKRLVEETKARVRILEGPVGATERIVLVSGKEDPDLELP 106
Query: 369 MAVEAVLLLQTKINDEDD------------DTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
A++A++ + + D D RLLV +IGK G+ I I++
Sbjct: 107 PAMDALMRVFKXVTGITDGAAEXTQAAATPDVCAARLLVPGAQAINLIGKQGATIKAIQE 166
Query: 417 RTKADVRI---SKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLR----DDALKDRD 469
T A +R+ + ++P ++ +VE+ G+ V AL + LR D ++
Sbjct: 167 STSATIRVISVDEHERPFYVTDDERIVEIQGDTEKVLKALQAVSNHLRKFLVDHSVLPLF 226
Query: 470 GSRNPPVGADHIYSSGTGISMPPL-------LPSI-------PPVGPLGYDQRADSGSGI 515
N V D + +S P + LPS+ PL ++ + I
Sbjct: 227 EKTNTTVSQDRNGDGWSDMSRPSIGSAQVNQLPSVLDDYILQVKRDPLYLERESLVDHNI 286
Query: 516 GMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSN 575
S SLYG D ++ + G L +T + +P +IG G+N
Sbjct: 287 HR-SGVSLYGR------DPALSTLRPSAVHGAGSLLTQITQTMQIPLTYAEDIIGVKGAN 339
Query: 576 LANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFIMA 623
+A IR SGA + + +S S D I GT Q +AA+ LIQ + A
Sbjct: 340 IAYIRANSGAVVTIQESLGSPDDITVEIKGTSSQVQAAQQLIQDSLAA 387
>gi|149728835|ref|XP_001494599.1| PREDICTED: poly(rC)-binding protein 4-like isoform 1 [Equus
caballus]
Length = 403
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 92/329 (27%), Positives = 156/329 (47%), Gaps = 52/329 (15%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
L +R+L ++G +IGK G T+K IR+ S A+I + + + E + T+T
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE--GSCPERITTITGS------T 69
Query: 368 SMAVEAVLLLQTKINDED------------DDTVTIRLLVSSKVIGCIIGKSGSIINEIR 415
+ AV ++ K+ DED VT+RL++ + G +IGK+G+ I EIR
Sbjct: 70 AAVFHAVSMIAFKL-DEDLCAAPTNGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIR 128
Query: 416 KRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPP 475
+ T A V+++ P ++ + V V G V DA++ + ++ L+ +PP
Sbjct: 129 ETTGAQVQVAGDLLP---NSTERAVTVSG----VPDAIILCVRQICAVILE------SPP 175
Query: 476 VGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSP 535
GA Y +S+ +L L +Q G ++S+ + LS P
Sbjct: 176 KGATIPYHPS--LSLGTVL--------LSANQGFSVQGQYGAVTSAEVTKLQQLSGHAVP 225
Query: 536 YGSMSSYSSKLYGGLPPPL---TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDS 592
+ S S + GL P + E LVP + +G VIG+ GS ++ IR++SGA I++ +
Sbjct: 226 FASPS-----MVPGLDPGAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQ 280
Query: 593 KSSRGDRVALISGTPEQKRAAENLIQAFI 621
G+R I+G+P A+ LI A +
Sbjct: 281 AEGAGERHVTITGSPVSIALAQYLITACL 309
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 137/325 (42%), Gaps = 51/325 (15%)
Query: 36 SVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKED 95
++ R+L +GS+IGK G+ + IR+++ AR+ + + +R+ TI
Sbjct: 17 TLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGSTAAVFH 74
Query: 96 VEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANII 155
F E LCAA T+ + ++++P+SQ ++I
Sbjct: 75 AVSMIAFKLDEDLCAA-----------------PTNGGSVSRPPVTLRLVIPASQCGSLI 117
Query: 156 GKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIM 215
GKAG IK +R T ++V T + V +SG +A+ + I A++
Sbjct: 118 GKAGTKIKEIRETTGAQVQVAGDLLPNST-------ERAVTVSGVPDAIILCVRQICAVI 170
Query: 216 YKFSPR-EDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVP 274
+ P+ IP PS+ + G + +A+ + + +A V
Sbjct: 171 LESPPKGATIPYH-------PSLSL---------GTVLLSANQGFSVQGQYGAVTSAEVT 214
Query: 275 DLQGYADTGNTWPVYSTGLSLVSGL-VGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSI 333
LQ +G+ P S S+V GL GA S + L P + IG VIG+ G I I
Sbjct: 215 KLQQL--SGHAVPFASP--SMVPGLDPGAQTSSQ---EFLVPNDLIGCVIGRQGSKISEI 267
Query: 334 RQASGAQIDVDDTKDNRDECVITVT 358
RQ SGA I + + + E +T+T
Sbjct: 268 RQMSGAHIKIGNQAEGAGERHVTIT 292
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 9/96 (9%)
Query: 384 EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVV 443
E T+T+R+L+ K +G IIGK G + IR+++ A + IS+G P + + +
Sbjct: 13 ELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCP------ERITTIT 66
Query: 444 GEVGSVRDALVQIILRLRDD--ALKDRDGS-RNPPV 476
G +V A+ I +L +D A GS PPV
Sbjct: 67 GSTAAVFHAVSMIAFKLDEDLCAAPTNGGSVSRPPV 102
>gi|356505941|ref|XP_003521747.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 443
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 94/359 (26%), Positives = 158/359 (44%), Gaps = 38/359 (10%)
Query: 25 INEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVV 84
+ EK G ++R+L P +G +IG+ G+ I I +ETRARVK++D PG R V
Sbjct: 32 VAEKKWPGWPGESVFRMLVPAQKVGGIIGRKGEFIKKIVEETRARVKILDGPPGTVQRAV 91
Query: 85 TIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAV-ANATDNDKKRKEKEECQ 143
I +E P A D LL++H I + + ++ T K +
Sbjct: 92 MI----------SAKEEPGSSVP--PAVDGLLRIHKRIIDGLESDFTHAPSGVAGKVSTK 139
Query: 144 ILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEA 203
+LVP+SQ+ ++IGK G T+K ++ + ++V +E A++ D V + G+
Sbjct: 140 LLVPASQAGSLIGKQGGTVKSIQEASNCIVRVL---GAEDLPIFALQDDRVVEVVGDPAG 196
Query: 204 VKKALFAISAIMYKF-SPREDIPL-ETTVREAPPSIIIPSDVPIYPPGG----------- 250
V KAL I++ + KF R IP+ E ++ A P +P + G
Sbjct: 197 VHKALELIASHLRKFLVDRGVIPIFEMNMQTANPHHA--EHMPPHQSWGPSQGLPPNVGG 254
Query: 251 ---LYPNADPILPSRSVPSILGAARVP---DLQGYADTGNTWPVYSTGLSLVSGLVGA-S 303
P + + P R + S +A +P D Q + S G+ S A S
Sbjct: 255 GPGFGPPSQYMPPPRQLDSYYPSAEMPPPVDRQPHQGISAYGRDASIGVHASSNTQSAPS 314
Query: 304 QSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIES 362
++ ++ P + VIG G +I IR+ASGA + + + + E + ++ S
Sbjct: 315 IVTQITQQMQIPLSYADAVIGTAGASISYIRRASGATVTIQEARGVPGEMTVEISGTAS 373
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 43/68 (63%)
Query: 554 LTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAA 613
+T ++ +P + VIG AG++++ IR+ SGAT+ + +++ G+ ISGT Q + A
Sbjct: 319 ITQQMQIPLSYADAVIGTAGASISYIRRASGATVTIQEARGVPGEMTVEISGTASQVQTA 378
Query: 614 ENLIQAFI 621
+ LIQ F+
Sbjct: 379 QQLIQNFM 386
>gi|357147442|ref|XP_003574345.1| PREDICTED: LOW QUALITY PROTEIN: poly(rC)-binding protein 1-like
[Brachypodium distachyon]
Length = 447
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 102/185 (55%), Gaps = 18/185 (9%)
Query: 38 IYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVE 97
++R++ P +GS+IG+ G++I + +ET+ARV+V+D GA +RVV V KE+
Sbjct: 48 VFRMVVPVXKVGSIIGRKGELIKRLVEETKARVRVLDGPVGATERVVL----VSGKEEPG 103
Query: 98 VDDEFNDKEPLCAAQDALLKVHA---AIANAVANATDNDKKRKEKEECQILVPSSQSANI 154
+D L A DAL++V I + A++T ++LVP +Q+ N+
Sbjct: 104 LD--------LPPAMDALIRVFKRVNGITDVAADSTTQTAAPPGVCAARLLVPGAQAINL 155
Query: 155 IGKAGATIKRLRSKTRTSIKVTPKDASE-PTHSCAMEFDNFVLISGESEAVKKALFAISA 213
IGK GA+IK ++ T +I+V D E P + + + V I GE+E V KAL A+S
Sbjct: 156 IGKQGASIKAIQEGTGATIRVISIDERERPFY--VTDDERIVEIQGETEKVLKALQAVSN 213
Query: 214 IMYKF 218
+ KF
Sbjct: 214 HLRKF 218
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 144/343 (41%), Gaps = 39/343 (11%)
Query: 309 VIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKS 368
V R++ P K+G +IG+ G IK + + + A++ V D E V+ V+ E P
Sbjct: 48 VFRMVVPVXKVGSIIGRKGELIKRLVEETKARVRVLDGPVGATERVVLVSGKEEPGLDLP 107
Query: 369 MAVEAVLLLQTKINDEDD---DTVT----------IRLLVSSKVIGCIIGKSGSIINEIR 415
A++A++ + ++N D D+ T RLLV +IGK G+ I I+
Sbjct: 108 PAMDALIRVFKRVNGITDVAADSTTQTAAPPGVCAARLLVPGAQAINLIGKQGASIKAIQ 167
Query: 416 KRTKADVR---ISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLR----DDALKDR 468
+ T A +R I + ++P ++ +VE+ GE V AL + LR D ++
Sbjct: 168 EGTGATIRVISIDERERPFYVTDDERIVEIQGETEKVLKALQAVSNHLRKFLVDHSVLPL 227
Query: 469 DGSRNPPVGAD----------HIYSSGTGISMPPLLPS---IPPVGPLGYDQRADSGSGI 515
N PV D H T ++ P + +P Y +R
Sbjct: 228 FEKTNAPVSQDRSADTWADMPHHSIVSTQVNQQPEVRDEYILPMKREHLYLEREPLVDHN 287
Query: 516 GMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSN 575
S SLYG P G S G L +T + +P +IG G+N
Sbjct: 288 IHRSGVSLYGRDPALSALRPSGMHS------VGPLLTQITQTMQIPLTYAEDIIGVKGAN 341
Query: 576 LANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQ 618
+A IR SGA + + +S S D I GT Q +AA+ LIQ
Sbjct: 342 IAYIRANSGAVVTIQESLGSPDDITVEIKGTSSQVQAAQQLIQ 384
>gi|74215286|dbj|BAE41861.1| unnamed protein product [Mus musculus]
Length = 530
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 148/327 (45%), Gaps = 49/327 (14%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSM 369
+R+L P +G +IGK G TIK+I + + +++D+ K+N VT +P+ S
Sbjct: 127 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHR-KENSGAAEKPVTIHATPEGT-SE 184
Query: 370 AVEAVLLLQTKINDEDD--DTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKG 427
A +L + K DE + V +++L + +G +IGK G + +I T + IS
Sbjct: 185 ACRMILEIMQKEADETKLAEEVPLKILAHNGFVGRLIGKEGRNLKKIEHETGTKITISSL 244
Query: 428 DKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKD-----RDGSRNPPVGADHIY 482
+ + + V G + + +A ++I+ +LR+ D + + P + +
Sbjct: 245 QDLSIYNP-ERTITVRGTIEACANAEIEIMKKLREAFENDMLAVNQQANLIPGLNLSALG 303
Query: 483 SSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSY 542
TG+S+ P PP GP G + S Y P+ + S Y
Sbjct: 304 IFSTGLSVLP-----PPAGPRG-------------VPPSPPY---------HPFATHSGY 336
Query: 543 SSKLYG-----------GLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSD 591
S LY P T+ + +P AVG +IGK G+++ + + +GA+I+++
Sbjct: 337 FSSLYPHHHFGPFPHHHSYPEQETVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAP 396
Query: 592 SKSSR-GDRVALISGTPEQKRAAENLI 617
++ +R+ +I+G PE + A+ I
Sbjct: 397 AEGPDVSERMVIITGPPEAQFKAQGRI 423
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 92/423 (21%), Positives = 171/423 (40%), Gaps = 58/423 (13%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKEDVEV 98
RIL P +G++IGK G I +I ++T++RV + GA ++ VTI++
Sbjct: 128 RILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHA---------- 177
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
E A +L++ A+ + K E+ +IL + +IGK
Sbjct: 178 -----TPEGTSEACRMILEIMQKEAD--------ETKLAEEVPLKILAHNGFVGRLIGKE 224
Query: 159 GATIKRLRSKTRTSIKVTP-KDAS--EPTHSCAMEFDNFVLISGESEAVKKALFAISAIM 215
G +K++ +T T I ++ +D S P + + + E E +KK A M
Sbjct: 225 GRNLKKIEHETGTKITISSLQDLSIYNPERTITVRGTIEACANAEIEIMKKLREAFENDM 284
Query: 216 YKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPD 275
+ + ++ P + + + G++ +LP + P G P
Sbjct: 285 LAVNQQANLI---------PGLNLSAL-------GIFSTGLSVLPPPAGPR--GVPPSPP 326
Query: 276 LQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQ 335
+A + S E+ + + P +G +IGK G IK + +
Sbjct: 327 YHPFATHSGYFSSLYPHHHFGPFPHHHSYPEQETVSLFIPTQAVGAIIGKKGAHIKQLAR 386
Query: 336 ASGAQIDVDDTK--DNRDECVITVTAIESPDDIKSMA---VEAVLLLQTKINDEDDDTVT 390
+GA I + + D + VI I P + + A + L + N +++ +
Sbjct: 387 FAGASIKIAPAEGPDVSERMVI----ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLE 442
Query: 391 IRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDE-LVEVVGEVGSV 449
+ V S G +IGK G +NE++ T A+V + + P D N+E +V ++G +
Sbjct: 443 AHIRVPSSTAGRVIGKGGKTVNELQNLTSAEVIVPRDQTP---DENEEVIVRIIGHFFAS 499
Query: 450 RDA 452
+ A
Sbjct: 500 QTA 502
>gi|223949173|gb|ACN28670.1| unknown [Zea mays]
gi|238010644|gb|ACR36357.1| unknown [Zea mays]
gi|413924015|gb|AFW63947.1| transcribed sequence 1087 protein [Zea mays]
Length = 344
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 147/322 (45%), Gaps = 30/322 (9%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD---NRDECVITVTAIESPDDI 366
+R L G +IGKGG TI + SGA+I + + + ++ +I V+ + + +
Sbjct: 43 LRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSNEFFPGTNDRIIMVSGLFD-EVM 101
Query: 367 KSMA-VEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRIS 425
K+M + LL + + +E + +RL+V + G IIGK G+ I + + A ++IS
Sbjct: 102 KAMELILEKLLAEGEEFNEAEARPKVRLVVPNSSCGGIIGKGGATIKSFIEESHAGIKIS 161
Query: 426 KGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSG 485
D +D LV + G + +A+ I+ +L +D + S P A + S
Sbjct: 162 PQDN-NYVGLHDRLVTITGTFDNQMNAIDLILKKLSEDVHYPPNLSSPFPY-AGLTFPSY 219
Query: 486 TGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSK 545
G+ + ++P +P Y + G GYG + P M S +S
Sbjct: 220 PGVPVGYMIPQVP------YSNAVNYGPN---------NGYGGRYQNNKPTTPMRSPASN 264
Query: 546 LYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSK---SSRGDRVAL 602
+L + + +G V+G+AG N+ I + SGA I++SD S DR
Sbjct: 265 -----EAQESLTIGIADEHIGAVVGRAGRNITEIIQASGARIKISDRGDYISGTSDRKVT 319
Query: 603 ISGTPEQKRAAENLIQAFIMAT 624
I+GTPE R AE++I + A+
Sbjct: 320 ITGTPEAIRTAESMIMQRVSAS 341
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 132/331 (39%), Gaps = 64/331 (19%)
Query: 27 EKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV---DPFPGAKDRV 83
E D+K E+ R L + G +IGK G IN + ++ AR+++ + FPG DR+
Sbjct: 33 EGDDK--EKPTHLRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSNEFFPGTNDRI 90
Query: 84 VTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQ 143
+ + D ++K I + + + + + + +
Sbjct: 91 IMV----------------------SGLFDEVMKAMELILEKLLAEGEEFNEAEARPKVR 128
Query: 144 ILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEA 203
++VP+S IIGK GATIK ++ IK++P+D ++ D V I+G
Sbjct: 129 LVVPNSSCGGIIGKGGATIKSFIEESHAGIKISPQD-----NNYVGLHDRLVTITG---T 180
Query: 204 VKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRS 263
+ AI I+ K S ED+ PP++ P +P A P S
Sbjct: 181 FDNQMNAIDLILKKLS--EDV-------HYPPNLSSP-----------FPYAGLTFP--S 218
Query: 264 VPSILGAARVPDLQGYADTGNTWP------VYSTGLSLVSGLVGASQSEELVIRVLCPFN 317
P + +P + Y++ N P Y AS + + +
Sbjct: 219 YPGVPVGYMIPQVP-YSNAVNYGPNNGYGGRYQNNKPTTPMRSPASNEAQESLTIGIADE 277
Query: 318 KIGRVIGKGGGTIKSIRQASGAQIDVDDTKD 348
IG V+G+ G I I QASGA+I + D D
Sbjct: 278 HIGAVVGRAGRNITEIIQASGARIKISDRGD 308
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 383 DEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEV 442
D+ + +R LVS+ GCIIGK GS IN+ + ++ A +++S+ ++ ND ++ V
Sbjct: 35 DDKEKPTHLRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSNE-FFPGTNDRIIMV 93
Query: 443 VGEVGSVRDALVQIILRLRDDALKDRDGSRNPPV 476
G V A+ I+ +L + + + P V
Sbjct: 94 SGLFDEVMKAMELILEKLLAEGEEFNEAEARPKV 127
Score = 39.3 bits (90), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 553 PLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS---SRGDRVALISGTPEQ 609
P L LV A G +IGK GS + + + SGA I++S S DR+ ++SG ++
Sbjct: 40 PTHLRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSNEFFPGTNDRIIMVSGLFDE 99
Query: 610 KRAAENLIQAFIMA 623
A LI ++A
Sbjct: 100 VMKAMELILEKLLA 113
>gi|195439130|ref|XP_002067484.1| GK16164 [Drosophila willistoni]
gi|194163569|gb|EDW78470.1| GK16164 [Drosophila willistoni]
Length = 587
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 152/333 (45%), Gaps = 49/333 (14%)
Query: 298 GLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITV 357
G+ G + + +R+L +G +IG+ G TI++I Q S A++DV K+N ++
Sbjct: 75 GMPGPGRQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVH-RKENVGSLEKSI 133
Query: 358 TAIESPDDIKSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKR 417
T +P++ + + ++Q + N + + +++L + +IG IIGKSG+ I I +
Sbjct: 134 TIYGNPENCTNACKRILEVMQQEANSTNKGEICLKILAHNNLIGRIIGKSGNTIKRIMQD 193
Query: 418 TKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVG 477
T + +S + + + ++ V G + ++ A QI +LR D
Sbjct: 194 TDTKITVSSINDINSFNL-ERIITVKGLIENMSRAENQISTKLRQSYENDLQ-------- 244
Query: 478 ADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYG 537
+M P P + P+ S G GM+ ++S+ P+
Sbjct: 245 -----------AMAPQSLMFPGLHPMAM----MSTPGNGMVFNTSM-----------PFP 278
Query: 538 SMSSYS-SKLYGGLPPPL-------TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEM 589
S ++ SK + PP+ T + +P NAVG +IG GS++ +I + S A++++
Sbjct: 279 SCQGFAMSKTPANVVPPVFPNDMQETTYLYIPNNAVGAIIGTKGSHIRSIMRFSNASLKI 338
Query: 590 SDSKS-----SRGDRVALISGTPEQKRAAENLI 617
+ + + +R I GTPE + A+ +I
Sbjct: 339 APIDADKPLDQQTERKVTIVGTPEGQWKAQYMI 371
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 112/459 (24%), Positives = 199/459 (43%), Gaps = 75/459 (16%)
Query: 12 RDNDRDGKNQKRRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVK 71
++ R +NQ+ G + RIL ++G++IG+ G I +I Q++RARV
Sbjct: 60 KNQRRSQRNQRNPYPGMPGPGRQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVD 119
Query: 72 VV-DPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANAT 130
V G+ ++ +TIY + E A +L+V AN+
Sbjct: 120 VHRKENVGSLEKSITIYG---------------NPENCTNACKRILEVMQQEANST---- 160
Query: 131 DNDKKRKEKEEC-QILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAM 189
+ E C +IL ++ IIGK+G TIKR+ T T I V S +
Sbjct: 161 ------NKGEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITV-----SSINDINSF 209
Query: 190 EFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPG 249
+ + + G E + +A IS + + S D+ AP S++ P ++P
Sbjct: 210 NLERIITVKGLIENMSRAENQISTKLRQ-SYENDLQA-----MAPQSLMFPG---LHPMA 260
Query: 250 GLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELV 309
+ + ++ + S+P P QG+A + T ++V + E
Sbjct: 261 MMSTPGNGMVFNTSMP-------FPSCQGFA-------MSKTPANVVPPVFPNDMQETTY 306
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQ-----IDVDDTKDNRDECVITVTAIESPD 364
+ + P N +G +IG G I+SI + S A ID D D + E +T+ + +P+
Sbjct: 307 LYI--PNNAVGAIIGTKGSHIRSIMRFSNASLKIAPIDADKPLDQQTERKVTI--VGTPE 362
Query: 365 DIKSMAVEAVLLLQTKINDE------DDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRT 418
+A ++ K+ +E DD +TI LLV+S +G IIGK G + E+++ T
Sbjct: 363 G----QWKAQYMIFEKMREEGFMCGTDDVRLTIELLVASSQVGRIIGKGGQNVRELQRVT 418
Query: 419 KADVRISKGDKPKCADANDEL-VEVVGEVGSVRDALVQI 456
+ +++ + + ++E V ++G SV+ A +I
Sbjct: 419 GSVIKLPEHALAPPSGGDEETPVHIIGPFYSVQSAQRRI 457
Score = 38.9 bits (89), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 30/38 (78%)
Query: 554 LTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSD 591
LT+E+LV ++ VG++IGK G N+ +++++G+ I++ +
Sbjct: 389 LTIELLVASSQVGRIIGKGGQNVRELQRVTGSVIKLPE 426
>gi|213511793|ref|NP_001133381.1| poly(rC)-binding protein 2 [Salmo salar]
gi|209152662|gb|ACI33123.1| PolyrC-binding protein 2 [Salmo salar]
Length = 327
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 159/338 (47%), Gaps = 40/338 (11%)
Query: 297 SGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVIT 356
SG++ + L IR+L ++G +IGK G ++K +R+ SGA+I++ + N E +IT
Sbjct: 3 SGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIIT 60
Query: 357 V----TAIESPDDIKSMAVEAVLLLQTKINDEDDDT-------VTIRLLVSSKVIGCIIG 405
+ TAI SM +E L+ I+ ++ VT+R++V + G +IG
Sbjct: 61 LAGPTTAI---FKAFSMIIEK---LEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIG 114
Query: 406 KSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDAL 465
K G I EIR+ T A V+++ P ++ + + + G S+ + + QI + + +
Sbjct: 115 KGGCKIKEIRESTGAQVQVAGDMLP---NSTERAITIAGTPQSIIECVKQICVVMLESPP 171
Query: 466 KDRDGSRNP-PVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLY 524
K P P G+ I++ G ++ G Q S + I S L
Sbjct: 172 KGVTIPYRPKPSGSPVIFAGGQAYAVQ---------GQHAIPQPDSSSASI----SPQLT 218
Query: 525 GYGSLSMGDSPYGSMSSYSSKLYGGLPPPL---TLEVLVPANAVGKVIGKAGSNLANIRK 581
L+M SP+ M + GG+ + E+ +P + +G +IG+ GS + IR+
Sbjct: 219 KLHQLAMQQSPF-PMGPNNPGFQGGMDASAQTSSHEMTIPNDLIGCIIGRQGSKINEIRQ 277
Query: 582 ISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQA 619
+SGA I++++ DR I+G+ AE LI A
Sbjct: 278 MSGAQIKIANPVEGSADRQVTITGSAASISLAEYLINA 315
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 144/341 (42%), Gaps = 59/341 (17%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH 89
E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R++T
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIIT---- 60
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAV-----ANATDNDKKRKEKEECQI 144
L A+ K + I + ++ T++ K +I
Sbjct: 61 ------------------LAGPTTAIFKAFSMIIEKLEEDISSSMTNSTATSKPPVTLRI 102
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAV 204
+VP+SQ ++IGK G IK +R T ++V T + + I+G +++
Sbjct: 103 VVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNST-------ERAITIAGTPQSI 155
Query: 205 KKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLY-----PNADPIL 259
+ + I +M + P+ T+ P PS P+ GG +A P
Sbjct: 156 IECVKQICVVMLESPPK-----GVTIPYRPK----PSGSPVIFAGGQAYAVQGQHAIP-Q 205
Query: 260 PSRSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQ--SEELVIRVLCPFN 317
P S SI + ++ L A + +P+ G+ ++Q S E+ I P +
Sbjct: 206 PDSSSASI--SPQLTKLHQLAMQQSPFPMGPNNPGFQGGMDASAQTSSHEMTI----PND 259
Query: 318 KIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
IG +IG+ G I IRQ SGAQI + + + + +T+T
Sbjct: 260 LIGCIIGRQGSKINEIRQMSGAQIKIANPVEGSADRQVTIT 300
>gi|148665206|gb|EDK97622.1| insulin-like growth factor 2 mRNA binding protein 2, isoform CRA_c
[Mus musculus]
Length = 543
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 148/327 (45%), Gaps = 49/327 (14%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSM 369
+R+L P +G +IGK G TIK+I + + +++D+ K+N VT +P+ S
Sbjct: 140 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHR-KENSGAAEKPVTIHATPEGT-SE 197
Query: 370 AVEAVLLLQTKINDEDD--DTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKG 427
A +L + K DE + V +++L + +G +IGK G + +I T + IS
Sbjct: 198 ACRMILEIMQKEADETKLAEEVPLKILAHNGFVGRLIGKEGRNLKKIEHETGTKITISSL 257
Query: 428 DKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKD-----RDGSRNPPVGADHIY 482
+ + + V G + + +A ++I+ +LR+ D + + P + +
Sbjct: 258 QDLSIYNP-ERTITVRGTIEACANAEIEIMKKLREAFENDMLAVNQQANLIPGLNLSALG 316
Query: 483 SSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSY 542
TG+S+ P PP GP G + S Y P+ + S Y
Sbjct: 317 IFSTGLSVLP-----PPAGPRG-------------VPPSPPY---------HPFATHSGY 349
Query: 543 SSKLYG-----------GLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSD 591
S LY P T+ + +P AVG +IGK G+++ + + +GA+I+++
Sbjct: 350 FSSLYPHHHFGPFPHHHSYPEQETVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAP 409
Query: 592 SKS-SRGDRVALISGTPEQKRAAENLI 617
++ +R+ +I+G PE + A+ I
Sbjct: 410 AEGPDVSERMVIITGPPEAQFKAQGRI 436
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 93/427 (21%), Positives = 173/427 (40%), Gaps = 58/427 (13%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKEDVEV 98
RIL P +G++IGK G I +I ++T++RV + GA ++ VTI++
Sbjct: 141 RILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHA---------- 190
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
E A +L++ A+ + K E+ +IL + +IGK
Sbjct: 191 -----TPEGTSEACRMILEIMQKEAD--------ETKLAEEVPLKILAHNGFVGRLIGKE 237
Query: 159 GATIKRLRSKTRTSIKVTP-KDAS--EPTHSCAMEFDNFVLISGESEAVKKALFAISAIM 215
G +K++ +T T I ++ +D S P + + + E E +KK A M
Sbjct: 238 GRNLKKIEHETGTKITISSLQDLSIYNPERTITVRGTIEACANAEIEIMKKLREAFENDM 297
Query: 216 YKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPD 275
+ + ++ P + + + G++ +LP + P G P
Sbjct: 298 LAVNQQANLI---------PGLNLSAL-------GIFSTGLSVLPPPAGPR--GVPPSPP 339
Query: 276 LQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQ 335
+A + S E+ + + P +G +IGK G IK + +
Sbjct: 340 YHPFATHSGYFSSLYPHHHFGPFPHHHSYPEQETVSLFIPTQAVGAIIGKKGAHIKQLAR 399
Query: 336 ASGAQIDVDDTK--DNRDECVITVTAIESPDDIKSMA---VEAVLLLQTKINDEDDDTVT 390
+GA I + + D + VI I P + + A + L + N +++ +
Sbjct: 400 FAGASIKIAPAEGPDVSERMVI----ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLE 455
Query: 391 IRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDE-LVEVVGEVGSV 449
+ V S G +IGK G +NE++ T A+V + + P D N+E +V ++G +
Sbjct: 456 AHIRVPSSTAGRVIGKGGKTVNELQNLTSAEVIVPRDQTP---DENEEVIVRIIGHFFAS 512
Query: 450 RDALVQI 456
+ A +I
Sbjct: 513 QTAQRKI 519
>gi|328720738|ref|XP_001949210.2| PREDICTED: poly(rC)-binding protein 3-like [Acyrthosiphon pisum]
Length = 436
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 149/325 (45%), Gaps = 27/325 (8%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT----AIESP 363
L IR+L ++G VIGKGG T+K+IR SGA++ + D + E ++T+T AI
Sbjct: 21 LTIRILFHGREVGNVIGKGGETVKNIRDQSGARVLISD--GSTPERIVTITGTTNAICKA 78
Query: 364 DDIKSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVR 423
++ + VE Q + +T +L+V + G IIGK G I EIR+ + A ++
Sbjct: 79 TELIGLKVEEFFERQNGDWNGPKAPLTFKLIVPASQCGFIIGKGGCKIKEIRESSGAAIQ 138
Query: 424 ISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYS 483
++ P ++ + LV + G G++ + Q+ L D + +P S
Sbjct: 139 VASDMLP---NSTERLVSITGTTGTISQCVYQVCNVLLDSPPRSATIPYDPRSKTSGFAS 195
Query: 484 SGTGISMPPLLPS-IPPVGPLGYDQRADSG---SGIGMLSSSSL-YGYGSLSMGDSPYGS 538
S G + + + LG + G + + L+ S L G G + +
Sbjct: 196 SAVGNDFGRQRTNPLASLAALGLGTASTGGINPAALAALAGSQLRTGNRQNRNGSGEHKN 255
Query: 539 MSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSR-- 596
+S S+ T+ + VP + +G VIG+ GS +A IR+ISGA + ++ + +
Sbjct: 256 QNSNSNT--------ETISMTVPNDLIGCVIGRRGSKIAEIRQISGALVHIAKGEGTHEN 307
Query: 597 ---GDRVALISGTPEQKRAAENLIQ 618
DR I+G + A+ LI+
Sbjct: 308 GENEDRHITITGNKDSISVAKYLIE 332
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 50/97 (51%), Gaps = 7/97 (7%)
Query: 379 TKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDE 438
+ ND +D +TIR+L + +G +IGK G + IR ++ A V IS G P +
Sbjct: 11 SSFNDYNDVNLTIRILFHGREVGNVIGKGGETVKNIRDQSGARVLISDGSTP------ER 64
Query: 439 LVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPP 475
+V + G ++ A I L++ ++ + ++G N P
Sbjct: 65 IVTITGTTNAICKATELIGLKV-EEFFERQNGDWNGP 100
>gi|115497150|ref|NP_001068751.1| poly(rC)-binding protein 4 [Bos taurus]
gi|119390858|sp|Q0VCU0.1|PCBP4_BOVIN RecName: Full=Poly(rC)-binding protein 4; AltName: Full=Alpha-CP4
gi|111304931|gb|AAI20010.1| Poly(rC) binding protein 4 [Bos taurus]
gi|296474781|tpg|DAA16896.1| TPA: poly(rC)-binding protein 4 [Bos taurus]
Length = 403
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 155/329 (47%), Gaps = 52/329 (15%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
L +R+L ++G +IGK G T+K IR+ S A+I + + + E + T+T
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE--GSCPERITTITGS------T 69
Query: 368 SMAVEAVLLLQTKINDED------------DDTVTIRLLVSSKVIGCIIGKSGSIINEIR 415
+ AV ++ K+ DED VT+RL++ + G +IGK+G+ I EIR
Sbjct: 70 AAVFHAVSMIAFKL-DEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIR 128
Query: 416 KRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPP 475
+ T A V+++ P ++ + V V G V DA++ + ++ L+ +PP
Sbjct: 129 ETTGAQVQVAGDLLP---NSTERAVTVSG----VPDAIILCVRQICAVILE------SPP 175
Query: 476 VGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSP 535
GA Y +S+ +L L +Q G ++ + + LS P
Sbjct: 176 KGATIPYHPS--LSLGTVL--------LSTNQGFSVQGQYGTVTPAEVTKLQQLSGHAVP 225
Query: 536 YGSMSSYSSKLYGGLPPPL---TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDS 592
+ S S + GL P + E LVP + +G VIG+ GS ++ IR++SGA I++ +
Sbjct: 226 FASPS-----MVPGLDPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQ 280
Query: 593 KSSRGDRVALISGTPEQKRAAENLIQAFI 621
G+R I+G+P A+ LI A +
Sbjct: 281 AEGAGERHVTITGSPVSIALAQYLITACL 309
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 133/324 (41%), Gaps = 49/324 (15%)
Query: 36 SVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKED 95
++ R+L +GS+IGK G+ + IR+++ AR+ + + +R+ TI
Sbjct: 17 TLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGSTAAVFH 74
Query: 96 VEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANII 155
F E LCAA + + ++++P+SQ ++I
Sbjct: 75 AVSMIAFKLDEDLCAA-----------------PANGGNVSRPPVTLRLVIPASQCGSLI 117
Query: 156 GKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIM 215
GKAG IK +R T ++V T + V +SG +A+ + I A++
Sbjct: 118 GKAGTKIKEIRETTGAQVQVAGDLLPNST-------ERAVTVSGVPDAIILCVRQICAVI 170
Query: 216 YKFSPR-EDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVP 274
+ P+ IP ++ ++ S + G Y P A V
Sbjct: 171 LESPPKGATIPYHPSLSLG---TVLLSTNQGFSVQGQYGTVTP-------------AEVT 214
Query: 275 DLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIR 334
LQ +G+ P S S+V GL ++Q+ L P + IG VIG+ G I IR
Sbjct: 215 KLQQL--SGHAVPFASP--SMVPGLDPSTQTSSQ--EFLVPNDLIGCVIGRQGSKISEIR 268
Query: 335 QASGAQIDVDDTKDNRDECVITVT 358
Q SGA I + + + E +T+T
Sbjct: 269 QMSGAHIKIGNQAEGAGERHVTIT 292
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 384 EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVV 443
E T+T+R+L+ K +G IIGK G + IR+++ A + IS+G P + + +
Sbjct: 13 ELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCP------ERITTIT 66
Query: 444 GEVGSVRDALVQIILRLRDD 463
G +V A+ I +L +D
Sbjct: 67 GSTAAVFHAVSMIAFKLDED 86
>gi|148665204|gb|EDK97620.1| insulin-like growth factor 2 mRNA binding protein 2, isoform CRA_a
[Mus musculus]
Length = 596
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 150/327 (45%), Gaps = 49/327 (14%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSM 369
+R+L P +G +IGK G TIK+I + + +++D+ K+N VT +P+ S
Sbjct: 193 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHR-KENSGAAEKPVTIHATPEGT-SE 250
Query: 370 AVEAVLLLQTKINDEDD--DTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKG 427
A +L + K DE + V +++L + +G +IGK G + +I T + IS
Sbjct: 251 ACRMILEIMQKEADETKLAEEVPLKILAHNGFVGRLIGKEGRNLKKIEHETGTKITISSL 310
Query: 428 DKPKCADANDELVEVVGEVGSVRDALVQIILRLRD----DALK-DRDGSRNPPVGADHIY 482
+ + + V G + + +A ++I+ +LR+ D L ++ + P + +
Sbjct: 311 QDLSIYNP-ERTITVRGTIEACANAEIEIMKKLREAFENDMLAVNQQANLIPGLNLSALG 369
Query: 483 SSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSY 542
TG+S+ P PP GP G + S Y P+ + S Y
Sbjct: 370 IFSTGLSVLP-----PPAGPRG-------------VPPSPPY---------HPFATHSGY 402
Query: 543 SSKLYG-----------GLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSD 591
S LY P T+ + +P AVG +IGK G+++ + + +GA+I+++
Sbjct: 403 FSSLYPHHHFGPFPHHHSYPEQETVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAP 462
Query: 592 SKS-SRGDRVALISGTPEQKRAAENLI 617
++ +R+ +I+G PE + A+ I
Sbjct: 463 AEGPDVSERMVIITGPPEAQFKAQGRI 489
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 93/427 (21%), Positives = 173/427 (40%), Gaps = 58/427 (13%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKEDVEV 98
RIL P +G++IGK G I +I ++T++RV + GA ++ VTI++
Sbjct: 194 RILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHA---------- 243
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
E A +L++ A+ + K E+ +IL + +IGK
Sbjct: 244 -----TPEGTSEACRMILEIMQKEAD--------ETKLAEEVPLKILAHNGFVGRLIGKE 290
Query: 159 GATIKRLRSKTRTSIKVTP-KDAS--EPTHSCAMEFDNFVLISGESEAVKKALFAISAIM 215
G +K++ +T T I ++ +D S P + + + E E +KK A M
Sbjct: 291 GRNLKKIEHETGTKITISSLQDLSIYNPERTITVRGTIEACANAEIEIMKKLREAFENDM 350
Query: 216 YKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPD 275
+ + ++ P + + + G++ +LP + P G P
Sbjct: 351 LAVNQQANLI---------PGLNLSAL-------GIFSTGLSVLPPPAGPR--GVPPSPP 392
Query: 276 LQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQ 335
+A + S E+ + + P +G +IGK G IK + +
Sbjct: 393 YHPFATHSGYFSSLYPHHHFGPFPHHHSYPEQETVSLFIPTQAVGAIIGKKGAHIKQLAR 452
Query: 336 ASGAQIDVDDTK--DNRDECVITVTAIESPDDIKSMA---VEAVLLLQTKINDEDDDTVT 390
+GA I + + D + VI I P + + A + L + N +++ +
Sbjct: 453 FAGASIKIAPAEGPDVSERMVI----ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLE 508
Query: 391 IRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDE-LVEVVGEVGSV 449
+ V S G +IGK G +NE++ T A+V + + P D N+E +V ++G +
Sbjct: 509 AHIRVPSSTAGRVIGKGGKTVNELQNLTSAEVIVPRDQTP---DENEEVIVRIIGHFFAS 565
Query: 450 RDALVQI 456
+ A +I
Sbjct: 566 QTAQRKI 572
>gi|410920039|ref|XP_003973491.1| PREDICTED: poly(rC)-binding protein 2-like [Takifugu rubripes]
Length = 327
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 152/320 (47%), Gaps = 27/320 (8%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITV----TAI-ES 362
L IR+L ++G +IGK G ++K +R+ SGA+I++ + N E +IT+ TAI ++
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLAGPTTAIFKA 71
Query: 363 PDDIKSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADV 422
I E + T VT+R++V + G +IGK G I EIR+ T A V
Sbjct: 72 FSMIIDKLEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQV 131
Query: 423 RISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNP-PVGADHI 481
+++ P ++ + + + G S+ + + QI + + + K P P G+ I
Sbjct: 132 QVAGDMLP---NSTERAITIAGTAHSIIECVKQICVVMLESPPKGVTIPYRPKPSGSPVI 188
Query: 482 YSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSS 541
++ G ++ G Q S + I S L L+M P+ M++
Sbjct: 189 FAGGQAYAVQ---------GQHAIPQPDSSSAAI----SPQLSKLHQLAMQQGPF-PMAT 234
Query: 542 YSSKLYG--GLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDR 599
+ G + E+ +P + +G +IG+ G+ ++ IR++SGA I++++ DR
Sbjct: 235 CNQGFTGMDASAQACSHEMTIPNDLIGCIIGRQGAKISEIRQMSGAQIKIANPVDGSTDR 294
Query: 600 VALISGTPEQKRAAENLIQA 619
I+G+P AE LI+A
Sbjct: 295 QVTITGSPASIGLAEYLIKA 314
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 80/346 (23%), Positives = 145/346 (41%), Gaps = 56/346 (16%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH 89
E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R++T
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIIT---- 60
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAV-----ANATDNDKKRKEKEECQI 144
L A+ K + I + + ++ T++ K +I
Sbjct: 61 ------------------LAGPTTAIFKAFSMIIDKLEEDISSSMTNSTATSKPPVTLRI 102
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAV 204
+VP+SQ ++IGK G IK +R T ++V T + + I+G + ++
Sbjct: 103 VVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNST-------ERAITIAGTAHSI 155
Query: 205 KKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGG--LYPNADPILPSR 262
+ + I +M + P+ T+ P PS P+ GG +P
Sbjct: 156 IECVKQICVVMLESPPKG-----VTIPYRPK----PSGSPVIFAGGQAYAVQGQHAIPQP 206
Query: 263 SVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQ--SEELVIRVLCPFNKIG 320
S + ++ L A +P+ + +G+ ++Q S E+ I P + IG
Sbjct: 207 DSSSAAISPQLSKLHQLAMQQGPFPMATCNQGF-TGMDASAQACSHEMTI----PNDLIG 261
Query: 321 RVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
+IG+ G I IRQ SGAQI + + D + +T+T SP I
Sbjct: 262 CIIGRQGAKISEIRQMSGAQIKIANPVDGSTDRQVTITG--SPASI 305
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 51/92 (55%), Gaps = 9/92 (9%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+TIRLL+ K +G IIGK G + ++R+ + A + IS+G+ P + ++ + G
Sbjct: 13 TLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCP------ERIITLAGPTT 66
Query: 448 SVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
++ A II +L +D ++ + + PPV
Sbjct: 67 AIFKAFSMIIDKLEEDISSSMTNSTATSKPPV 98
>gi|356530005|ref|XP_003533576.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 385
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 148/335 (44%), Gaps = 76/335 (22%)
Query: 303 SQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIES 362
++ ++++ R++ P +IG+VIGK G I+ IR+ + A I + D +E VI +++ ++
Sbjct: 97 AKGQDVIFRIVVPSRQIGKVIGKEGHRIQKIREDTKATIKIADAIARHEERVIIISSKDN 156
Query: 363 PDDIKSMAVEAVLLLQTKINDEDDDTV-------------TIRLLVSSKVIGCIIGKSGS 409
D+ + A +A+ + I EDD ++ TIRLL++ G +IG SG
Sbjct: 157 -DEKVTDAEKALEQIAHLILKEDDSSLDASKVTAGHVAANTIRLLIAGSQAGGLIGMSGQ 215
Query: 410 IINEIRKRTKADVRISKGDK-PKCADAN--DELVEVVGEVGSVRDALVQIILRLRDDALK 466
I ++R + A + + ++ P CA A+ D +V++ G+V +V AL +I +LR+
Sbjct: 216 NIEKLRDSSGASITVLAPNQLPLCASAHESDRVVQLSGDVPAVMKALEEIGCQLRE---- 271
Query: 467 DRDGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGY 526
NPP + S + + PS P + P D
Sbjct: 272 ------NPP---RQVISISPTYNYAAIRPSQPYLDPTSVDY------------------- 303
Query: 527 GSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGAT 586
+T E+L+ VG +IG+ GSN++ IR SGA
Sbjct: 304 ---------------------------VTFEMLISETMVGGLIGRCGSNISRIRNESGAM 336
Query: 587 IEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFI 621
I++ K + R G+ +Q A+ + +I
Sbjct: 337 IKVYGGKGEQKHRQIQFGGSAQQVALAKQRVDEYI 371
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 110/232 (47%), Gaps = 19/232 (8%)
Query: 4 SGKRYRSQRDNDRDGK-NQKRRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSI 62
SGKR +RD++ G + + K KG + VI+RI+ P IG VIGK G I I
Sbjct: 73 SGKR---RRDDENSGTASAPEQSAAKRAKGQD--VIFRIVVPSRQIGKVIGKEGHRIQKI 127
Query: 63 RQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQ-DALLKVHAA 121
R++T+A +K+ D ++RV+ I S D++ + + L + D+ L
Sbjct: 128 REDTKATIKIADAIARHEERVIIISSKDNDEKVTDAEKALEQIAHLILKEDDSSLDASKV 187
Query: 122 IANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDAS 181
A VA T ++L+ SQ+ +IG +G I++LR + SI V +
Sbjct: 188 TAGHVAANT-----------IRLLIAGSQAGGLIGMSGQNIEKLRDSSGASITVLAPN-Q 235
Query: 182 EPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREA 233
P + A E D V +SG+ AV KAL I + + PR+ I + T A
Sbjct: 236 LPLCASAHESDRVVQLSGDVPAVMKALEEIGCQLRENPPRQVISISPTYNYA 287
>gi|449531912|ref|XP_004172929.1| PREDICTED: poly(rC)-binding protein 3-like [Cucumis sativus]
Length = 453
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 100/194 (51%), Gaps = 15/194 (7%)
Query: 25 INEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVV 84
++EK G ++R+L P +GS+IG+ G+ I I +ETRAR+K++D PG +R V
Sbjct: 73 VSEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAV 132
Query: 85 TIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQI 144
+ + KD+ D A D LL+VH I + + + K ++
Sbjct: 133 MVSA--KDEPD----------SAFPPAVDGLLRVHKRIVDGLEGDNAHAPNAGSKVSTRL 180
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAV 204
LV +SQ+ ++IGK G T+K ++ ++ ++V SE A++ D V + G+ V
Sbjct: 181 LVAASQAGSLIGKQGGTVKSIQEESNCIVRVL---GSEDLPVFALQDDRVVEVLGDPAGV 237
Query: 205 KKALFAISAIMYKF 218
KA+ I++ + KF
Sbjct: 238 HKAVELIASHLRKF 251
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 84/166 (50%), Gaps = 11/166 (6%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
E V R+L P K+G +IG+ G IK I + + A+I + D E + V+A + PD
Sbjct: 84 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMVSAKDEPDSA 143
Query: 367 KSMAVEAVLLLQTKIND--EDDDT--------VTIRLLVSSKVIGCIIGKSGSIINEIRK 416
AV+ +L + +I D E D+ V+ RLLV++ G +IGK G + I++
Sbjct: 144 FPPAVDGLLRVHKRIVDGLEGDNAHAPNAGSKVSTRLLVAASQAGSLIGKQGGTVKSIQE 203
Query: 417 RTKADVRI-SKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLR 461
+ VR+ D P A +D +VEV+G+ V A+ I LR
Sbjct: 204 ESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHLR 249
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 55/92 (59%)
Query: 533 DSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDS 592
++P G ++ +++ + T ++ +P + VIG AG++++ IR+ SGAT+ + ++
Sbjct: 342 EAPMGVHAASNAQSAPSIVTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQET 401
Query: 593 KSSRGDRVALISGTPEQKRAAENLIQAFIMAT 624
+ G+ +SGT Q +AA+ LIQA I ++
Sbjct: 402 RGVPGEMTVEMSGTASQVQAAQQLIQAIIFSS 433
>gi|451855342|gb|EMD68634.1| hypothetical protein COCSADRAFT_350318 [Cochliobolus sativus
ND90Pr]
Length = 488
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 93/367 (25%), Positives = 165/367 (44%), Gaps = 67/367 (18%)
Query: 304 QSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESP 363
++ L +R ++ +IGKGG + IR+ SGA+ V D E ++TV+
Sbjct: 125 ETNWLHVRACIGTSEAATIIGKGGENVTQIRRLSGAKCTVSDYSRGAVERILTVSG---- 180
Query: 364 DDIKSMAVEAVLLLQTKINDEDDDTVT--------IRLLVSSKVIGCIIGKSGSIINEIR 415
+ +++ L+++T +N ED +T + +RLL+ +IG IIGK+G I EI+
Sbjct: 181 -QVDAVSKAFGLIVRT-LNQEDLETPSTSTSKAYPMRLLIPHILIGSIIGKAGVRIREIQ 238
Query: 416 KRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPP 475
+ + A + S P ++ + + V+G +V A+ + L + L +R G P
Sbjct: 239 EASNAKLNASDTLLP---NSGERSLIVLGVADAVHIAVYYVAQTLVEQ-LTERFGG---P 291
Query: 476 VGADHIYSSGT-------GISMPPLLPSIPPVGPLGYDQR-----------ADSGSGI-- 515
+ + SG G+S+ P +P P G + Q A G G
Sbjct: 292 AASQYATRSGMAANVVPGGMSVQPYVPQ-PAGGQYSHPQNFRRQEPAQRTPAHGGYGAPH 350
Query: 516 --GMLSSSSLYG-----YGSLSMGDSPYGSMSSYS-----------------SKLYGGLP 551
G S YG YG+ S PYG ++ + G +P
Sbjct: 351 MHGQPPQQSPYGHPNMPYGAASPSRGPYGGPAAPTPYGAHPAAAPVAHGAAPHAPVGAIP 410
Query: 552 -PPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQK 610
PLT ++ +P + VG +IGK G+ + IR++SG+ I++++ + +R+ I+GT E
Sbjct: 411 GQPLTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPTDNSNERLVTITGTQECN 470
Query: 611 RAAENLI 617
+ A ++
Sbjct: 471 QMALYML 477
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 78/380 (20%), Positives = 152/380 (40%), Gaps = 82/380 (21%)
Query: 50 SVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLC 109
++IGK G+ + IR+ + A+ V D GA +R++T+ V
Sbjct: 142 TIIGKGGENVTQIRRLSGAKCTVSDYSRGAVERILTVSGQV------------------- 182
Query: 110 AAQDALLKVHAAIANAVANATDNDKKRKEKEEC---QILVPSSQSANIIGKAGATIKRLR 166
DA+ K I + N D + + ++L+P +IIGKAG I+ ++
Sbjct: 183 ---DAVSKAFGLIVRTL-NQEDLETPSTSTSKAYPMRLLIPHILIGSIIGKAGVRIREIQ 238
Query: 167 SKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAIS-AIMYKFSPREDIP 225
+ K+ D P + +++ G ++AV A++ ++ ++ + + R P
Sbjct: 239 EASNA--KLNASDTLLPNSG-----ERSLIVLGVADAVHIAVYYVAQTLVEQLTERFGGP 291
Query: 226 L--ETTVREAPPSIIIPSDVPIYP-----PGGLYPNADPIL---PSRSVPSILGAARVPD 275
+ R + ++P + + P GG Y + P++ P+ G P
Sbjct: 292 AASQYATRSGMAANVVPGGMSVQPYVPQPAGGQYSHPQNFRRQEPAQRTPA-HGGYGAPH 350
Query: 276 LQGYADTGNTW--PVYSTGLSLVS-----------------------------GLVGASQ 304
+ G + + P G + S VGA
Sbjct: 351 MHGQPPQQSPYGHPNMPYGAASPSRGPYGGPAAPTPYGAHPAAAPVAHGAAPHAPVGAIP 410
Query: 305 SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPD 364
+ L ++ P + +G +IGKGG I IRQ SG+ I +++ DN +E ++T+T + +
Sbjct: 411 GQPLTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPTDNSNERLVTITGTQECN 470
Query: 365 DIKSMAVEAVLLLQTKINDE 384
+ A+ +L +++ E
Sbjct: 471 QM------ALYMLYSRLESE 484
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 34/52 (65%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTI 86
+ + +I P+ ++G++IGK G IN IRQ + + +K+ +P + +R+VTI
Sbjct: 412 QPLTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPTDNSNERLVTI 463
>gi|145207996|ref|NP_898850.2| insulin-like growth factor 2 mRNA-binding protein 2 [Mus musculus]
gi|81889459|sp|Q5SF07.1|IF2B2_MOUSE RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 2;
Short=IGF2 mRNA-binding protein 2; Short=IMP-2; AltName:
Full=IGF-II mRNA-binding protein 2; AltName: Full=VICKZ
family member 2
gi|46577878|gb|AAT01428.1| insulin-like growth factor 2 mRNA-binding protein 2 [Mus musculus]
Length = 592
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 150/327 (45%), Gaps = 49/327 (14%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSM 369
+R+L P +G +IGK G TIK+I + + +++D+ K+N VT +P+ S
Sbjct: 189 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHR-KENSGAAEKPVTIHATPEGT-SE 246
Query: 370 AVEAVLLLQTKINDEDD--DTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKG 427
A +L + K DE + V +++L + +G +IGK G + +I T + IS
Sbjct: 247 ACRMILEIMQKEADETKLAEEVPLKILAHNGFVGRLIGKEGRNLKKIEHETGTKITISSL 306
Query: 428 DKPKCADANDELVEVVGEVGSVRDALVQIILRLRD----DALK-DRDGSRNPPVGADHIY 482
+ + + V G + + +A ++I+ +LR+ D L ++ + P + +
Sbjct: 307 QDLSIYNP-ERTITVRGTIEACANAEIEIMKKLREAFENDMLAVNQQANLIPGLNLSALG 365
Query: 483 SSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSY 542
TG+S+ P PP GP G + S Y P+ + S Y
Sbjct: 366 IFSTGLSVLP-----PPAGPRG-------------VPPSPPY---------HPFATHSGY 398
Query: 543 SSKLYG-----------GLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSD 591
S LY P T+ + +P AVG +IGK G+++ + + +GA+I+++
Sbjct: 399 FSSLYPHHHFGPFPHHHSYPEQETVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAP 458
Query: 592 SKS-SRGDRVALISGTPEQKRAAENLI 617
++ +R+ +I+G PE + A+ I
Sbjct: 459 AEGPDVSERMVIITGPPEAQFKAQGRI 485
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 93/427 (21%), Positives = 173/427 (40%), Gaps = 58/427 (13%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKEDVEV 98
RIL P +G++IGK G I +I ++T++RV + GA ++ VTI++
Sbjct: 190 RILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHA---------- 239
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
E A +L++ A+ + K E+ +IL + +IGK
Sbjct: 240 -----TPEGTSEACRMILEIMQKEAD--------ETKLAEEVPLKILAHNGFVGRLIGKE 286
Query: 159 GATIKRLRSKTRTSIKVTP-KDAS--EPTHSCAMEFDNFVLISGESEAVKKALFAISAIM 215
G +K++ +T T I ++ +D S P + + + E E +KK A M
Sbjct: 287 GRNLKKIEHETGTKITISSLQDLSIYNPERTITVRGTIEACANAEIEIMKKLREAFENDM 346
Query: 216 YKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPD 275
+ + ++ P + + + G++ +LP + P G P
Sbjct: 347 LAVNQQANLI---------PGLNLSAL-------GIFSTGLSVLPPPAGPR--GVPPSPP 388
Query: 276 LQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQ 335
+A + S E+ + + P +G +IGK G IK + +
Sbjct: 389 YHPFATHSGYFSSLYPHHHFGPFPHHHSYPEQETVSLFIPTQAVGAIIGKKGAHIKQLAR 448
Query: 336 ASGAQIDVDDTK--DNRDECVITVTAIESPDDIKSMA---VEAVLLLQTKINDEDDDTVT 390
+GA I + + D + VI I P + + A + L + N +++ +
Sbjct: 449 FAGASIKIAPAEGPDVSERMVI----ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLE 504
Query: 391 IRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDE-LVEVVGEVGSV 449
+ V S G +IGK G +NE++ T A+V + + P D N+E +V ++G +
Sbjct: 505 AHIRVPSSTAGRVIGKGGKTVNELQNLTSAEVIVPRDQTP---DENEEVIVRIIGHFFAS 561
Query: 450 RDALVQI 456
+ A +I
Sbjct: 562 QTAQRKI 568
>gi|348519757|ref|XP_003447396.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 1 [Oreochromis niloticus]
Length = 611
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 152/326 (46%), Gaps = 30/326 (9%)
Query: 304 QSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESP 363
+ + +R+L P +G +IGK G TIK + + + +++D+ K+N +T +P
Sbjct: 195 RQHDFPLRMLVPTQFVGAIIGKEGNTIKDVTKQTQSKVDI-HRKENAGAAEKPITIHSTP 253
Query: 364 DDIKSMAVEAVLLLQTKINDEDDDT--VTIRLLVSSKVIGCIIGKSGSIINEIRKRTKAD 421
+ S A +L + K +E T + +++L + ++G +IGK G + +I + T
Sbjct: 254 EGC-SAACRMILDIMQKEANETKTTEDIPLKILAHNSLVGRLIGKEGRNLKKIEEDTGTK 312
Query: 422 VRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLR-----DDALKDRDGSRNP-- 474
+ IS + + + V G + + A V+I +LR D A ++ + P
Sbjct: 313 ITISSLQDLTIYNP-ERTITVKGSIDACCKAEVEITKKLREAYENDIAAINQQANLIPGL 371
Query: 475 PVGADHIYSSGTGISMPPLLP--SIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMG 532
+ A I+SSG + P P ++P V P GY+ S + S LYG S
Sbjct: 372 NLNALGIFSSGLPVLPPAAGPRSAVPAVAPAGYNPFLSHSSHL-----SGLYGVPPASAI 426
Query: 533 DSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDS 592
+ + +Y + +P AVG +IGK G ++ + +GA+I+++ +
Sbjct: 427 PHQHSQQAPEQEVVY----------LFIPTQAVGALIGKKGQHIKQLAHFAGASIKIAPA 476
Query: 593 KSSR-GDRVALISGTPEQKRAAENLI 617
+S +R+ +I+GTPE + A+ I
Sbjct: 477 ESPDVTERMVIITGTPEAQFKAQGRI 502
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 109/471 (23%), Positives = 188/471 (39%), Gaps = 100/471 (21%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKEDVEV 98
R+L P +G++IGK G I + ++T+++V + GA ++ +TI+S
Sbjct: 202 RMLVPTQFVGAIIGKEGNTIKDVTKQTQSKVDIHRKENAGAAEKPITIHS---------- 251
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
E AA +L + A N+ K E +IL +S +IGK
Sbjct: 252 -----TPEGCSAACRMILDIMQKEA--------NETKTTEDIPLKILAHNSLVGRLIGKE 298
Query: 159 GATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKF 218
G +K++ T T I + S + + + G +A KA I+ + +
Sbjct: 299 GRNLKKIEEDTGTKITI-----SSLQDLTIYNPERTITVKGSIDACCKAEVEITKKLRE- 352
Query: 219 SPREDIPLETTVREAPPSI------IIPSDVPIYPPGGLYPNADPILPSRSVPSILGAAR 272
+ DI P + I S +P+ PP P +VP++ A
Sbjct: 353 AYENDIAAINQQANLIPGLNLNALGIFSSGLPVLPPAA--------GPRSAVPAVAPA-- 402
Query: 273 VPDLQGYADTGNTWPVYSTGLSLVSGLVGAS---------QSEELVIRVLCPFNKIGRVI 323
GY N + +S+ LS + G+ AS E+ V+ + P +G +I
Sbjct: 403 -----GY----NPFLSHSSHLSGLYGVPPASAIPHQHSQQAPEQEVVYLFIPTQAVGALI 453
Query: 324 GKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAV-----EAVLLLQ 378
GK G IK + +GA I + ESPD + M + EA Q
Sbjct: 454 GKKGQHIKQLAHFAGASIK--------------IAPAESPDVTERMVIITGTPEAQFKAQ 499
Query: 379 TKI----------NDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGD 428
+I + +++ + + V S G +IGK G +NE++ T A+V + +
Sbjct: 500 GRIFGKLKEENFFSAKEEVKLETHIKVPSSAAGRVIGKGGKTVNELQNLTSAEVIVPRDQ 559
Query: 429 KPKCADANDE-LVEVVGEVGSVRDA---LVQIILRLRDDALKDRDGSRNPP 475
P D NDE V++ G + + A + +II +++ K + G+ P
Sbjct: 560 TP---DENDEVFVKISGHFFASQTAQRKIREIIQQVKQQEQKHQQGAAVSP 607
Score = 47.4 bits (111), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 80/199 (40%), Gaps = 30/199 (15%)
Query: 26 NEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDP-FPGAKDRVV 84
++ ++ E+ V+Y + P +G++IGK G+ I + A +K+ P +R+V
Sbjct: 428 HQHSQQAPEQEVVY-LFIPTQAVGALIGKKGQHIKQLAHFAGASIKIAPAESPDVTERMV 486
Query: 85 TIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQI 144
I +A K I + K + K E I
Sbjct: 487 II----------------------TGTPEAQFKAQGRIFGKLKEENFFSAKEEVKLETHI 524
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAV 204
VPSS + +IGK G T+ L++ T + + P+D + + + FV ISG A
Sbjct: 525 KVPSSAAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPDEND-----EVFVKISGHFFAS 578
Query: 205 KKALFAISAIMYKFSPRED 223
+ A I I+ + +E
Sbjct: 579 QTAQRKIREIIQQVKQQEQ 597
>gi|167614344|gb|ABZ89744.1| IGF-II mRNA-binding protein 2a [Danio rerio]
Length = 607
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 161/330 (48%), Gaps = 31/330 (9%)
Query: 300 VGASQSE-ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
+G+ Q + + +R+L P +G +IGK G TIK+I + + +++D+ K+N +T
Sbjct: 189 LGSRQKQPDFPLRMLVPTQFVGAIIGKEGLTIKNITKQTQSKVDIHR-KENAGAAEKPIT 247
Query: 359 AIESPDDIKSMAVEAVLLLQTK--INDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
+P+ S A ++ + K ++ + + + +++L + ++G +IGK G + +I +
Sbjct: 248 IHSTPEGC-STACHMIMDIMQKEAVDTKVTEDIPLKILAHNSLVGRLIGKEGRNLKKIEE 306
Query: 417 RTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLR-----DDALKDRDGS 471
T+ + IS + ++ V G + + A V+I+ +LR D A ++ +
Sbjct: 307 DTETKITISSLQDLTIYNPERTII-VKGSIEACCRAEVEIMKKLREAYENDVAAINQQSN 365
Query: 472 RNP--PVGADHIYSSGTGISMPPLLP-SIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGS 528
P + A I+S+G + P P IPPV P GY+ S +G LYG
Sbjct: 366 LIPGLSLSALGIFSTGLSVLPPAAGPRGIPPVPPTGYNPFLGHSSQLG-----GLYGV-- 418
Query: 529 LSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIE 588
P +S ++ P + + +P AVG +IGK G ++ + + +GA+I+
Sbjct: 419 -----PPASGISHQHTQA----PEQEVVYLFIPTQAVGAIIGKKGQHIKQLARFAGASIK 469
Query: 589 MSDSKS-SRGDRVALISGTPEQKRAAENLI 617
++ ++S R+ +I+G PE + A+ I
Sbjct: 470 IAPAESPDVTQRMVIITGPPEAQFKAQGRI 499
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 106/469 (22%), Positives = 183/469 (39%), Gaps = 98/469 (20%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKEDVEV 98
R+L P +G++IGK G I +I ++T+++V + GA ++ +TI+S
Sbjct: 201 RMLVPTQFVGAIIGKEGLTIKNITKQTQSKVDIHRKENAGAAEKPITIHS---------- 250
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
E A ++ + A D K E +IL +S +IGK
Sbjct: 251 -----TPEGCSTACHMIMDIMQKEAV--------DTKVTEDIPLKILAHNSLVGRLIGKE 297
Query: 159 GATIKRLRSKTRTSIKVTP-KDAS--EPTHSCAMEFDNFVLISGESEAVKKALFAISAIM 215
G +K++ T T I ++ +D + P + ++ E E +KK A +
Sbjct: 298 GRNLKKIEEDTETKITISSLQDLTIYNPERTIIVKGSIEACCRAEVEIMKKLREAYENDV 357
Query: 216 YKFSPRED-IP---------LETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVP 265
+ + + IP T + PP+ P +P PP G +P L S
Sbjct: 358 AAINQQSNLIPGLSLSALGIFSTGLSVLPPAAG-PRGIPPVPPTGY----NPFLGHSS-- 410
Query: 266 SILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGK 325
+ G VP G + P E+ V+ + P +G +IGK
Sbjct: 411 QLGGLYGVPPASGISHQHTQAP------------------EQEVVYLFIPTQAVGAIIGK 452
Query: 326 GGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAV-----EAVLLLQTK 380
G IK + + +GA I + ESPD + M + EA Q +
Sbjct: 453 KGQHIKQLARFAGASIKI--------------APAESPDVTQRMVIITGPPEAQFKAQGR 498
Query: 381 I----------NDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKP 430
I +++ + + V S G +IGK G +NE++ T A+V + + P
Sbjct: 499 IFGKLKEENFFTAKEEVKLETHIKVPSSAAGRVIGKGGKTVNELQNLTSAEVIVPRDQTP 558
Query: 431 KCADANDE-LVEVVGEVGSVRDA---LVQIILRLRDDALKDRDGSRNPP 475
D NDE V++ G + + A + +II +++ K + G+ P
Sbjct: 559 ---DENDEVFVKISGHFFASQTAQRKIREIIQQVKQQEQKHQQGAPTTP 604
Score = 46.6 bits (109), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 80/200 (40%), Gaps = 30/200 (15%)
Query: 25 INEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDP-FPGAKDRV 83
I+ + + E+ V+Y + P +G++IGK G+ I + + A +K+ P R+
Sbjct: 424 ISHQHTQAPEQEVVY-LFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAESPDVTQRM 482
Query: 84 VTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQ 143
V I +A K I + K + K E
Sbjct: 483 VII----------------------TGPPEAQFKAQGRIFGKLKEENFFTAKEEVKLETH 520
Query: 144 ILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEA 203
I VPSS + +IGK G T+ L++ T + + P+D + + + FV ISG A
Sbjct: 521 IKVPSSAAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPDEND-----EVFVKISGHFFA 574
Query: 204 VKKALFAISAIMYKFSPRED 223
+ A I I+ + +E
Sbjct: 575 SQTAQRKIREIIQQVKQQEQ 594
>gi|238836386|gb|ACR61401.1| IGF-II mRNA-binding protein 2a variant B [Danio rerio]
Length = 542
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 161/330 (48%), Gaps = 31/330 (9%)
Query: 300 VGASQSE-ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
+G+ Q + + +R+L P +G +IGK G TIK+I + + +++D+ K+N +T
Sbjct: 189 LGSRQKQPDFPLRMLVPTQFVGAIIGKEGLTIKNITKQTQSKVDIHR-KENAGAAEKPIT 247
Query: 359 AIESPDDIKSMAVEAVLLLQTK--INDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
+P+ S A ++ + K ++ + + + +++L + ++G +IGK G + +I +
Sbjct: 248 IHSTPEGC-STACHMIMDIMQKEAVDTKVTEDIPLKILAHNSLVGRLIGKEGRNLKKIEE 306
Query: 417 RTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLR-----DDALKDRDGS 471
T+ + IS + ++ V G + + A V+I+ +LR D A ++ +
Sbjct: 307 DTETKITISSLQDLTIYNPERTII-VKGSIEACCRAEVEIMKKLREAYENDVAAINQQSN 365
Query: 472 RNP--PVGADHIYSSGTGISMPPLLP-SIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGS 528
P + A I+S+G + P P IPPV P GY+ S +G LYG
Sbjct: 366 LIPGLSLSALGIFSTGLSVLPPAAGPRGIPPVPPTGYNPFLGHSSQLG-----GLYGV-- 418
Query: 529 LSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIE 588
P +S ++ P + + +P AVG +IGK G ++ + + +GA+I+
Sbjct: 419 -----PPASGISHQHTQA----PEQEVVYLFIPTQAVGAIIGKKGQHIKQLARFAGASIK 469
Query: 589 MSDSKS-SRGDRVALISGTPEQKRAAENLI 617
++ ++S R+ +I+G PE + A+ I
Sbjct: 470 IAPAESPDVTQRMVIITGPPEAQFKAQGRI 499
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 88/401 (21%), Positives = 149/401 (37%), Gaps = 91/401 (22%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKEDVEV 98
R+L P +G++IGK G I +I ++T+++V + GA ++ +TI+S
Sbjct: 201 RMLVPTQFVGAIIGKEGLTIKNITKQTQSKVDIHRKENAGAAEKPITIHS---------- 250
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
E A ++ + A D K E +IL +S +IGK
Sbjct: 251 -----TPEGCSTACHMIMDIMQKEA--------VDTKVTEDIPLKILAHNSLVGRLIGKE 297
Query: 159 GATIKRLRSKTRTSIKVTP-KDAS--EPTHSCAMEFDNFVLISGESEAVKKALFAISAIM 215
G +K++ T T I ++ +D + P + ++ E E +KK A +
Sbjct: 298 GRNLKKIEEDTETKITISSLQDLTIYNPERTIIVKGSIEACCRAEVEIMKKLREAYENDV 357
Query: 216 YKFSPRED-IP---------LETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVP 265
+ + + IP T + PP+ P +P PP G +P L S
Sbjct: 358 AAINQQSNLIPGLSLSALGIFSTGLSVLPPA-AGPRGIPPVPPTGY----NPFLGHSS-- 410
Query: 266 SILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGK 325
+ G VP G + P E+ V+ + P +G +IGK
Sbjct: 411 QLGGLYGVPPASGISHQHTQAP------------------EQEVVYLFIPTQAVGAIIGK 452
Query: 326 GGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAV-----EAVLLLQTK 380
G IK + + +GA I + ESPD + M + EA Q +
Sbjct: 453 KGQHIKQLARFAGASIK--------------IAPAESPDVTQRMVIITGPPEAQFKAQGR 498
Query: 381 I----------NDEDDDTVTIRLLVSSKVIGCIIGKSGSII 411
I +++ + + V S G +IGK G +
Sbjct: 499 IFGKLKEENFFTAKEEVKLETHIKVPSSAAGRVIGKGGKTV 539
Score = 38.9 bits (89), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 55/140 (39%), Gaps = 24/140 (17%)
Query: 25 INEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDP-FPGAKDRV 83
I+ + + E+ V+Y + P +G++IGK G+ I + + A +K+ P R+
Sbjct: 424 ISHQHTQAPEQEVVY-LFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAESPDVTQRM 482
Query: 84 VTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQ 143
V I +A K I + K + K E
Sbjct: 483 VII----------------------TGPPEAQFKAQGRIFGKLKEENFFTAKEEVKLETH 520
Query: 144 ILVPSSQSANIIGKAGATIK 163
I VPSS + +IGK G T++
Sbjct: 521 IKVPSSAAGRVIGKGGKTVR 540
>gi|148665207|gb|EDK97623.1| insulin-like growth factor 2 mRNA binding protein 2, isoform CRA_d
[Mus musculus]
Length = 603
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 148/327 (45%), Gaps = 49/327 (14%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSM 369
+R+L P +G +IGK G TIK+I + + +++D+ K+N VT +P+ S
Sbjct: 200 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHR-KENSGAAEKPVTIHATPEGT-SE 257
Query: 370 AVEAVLLLQTKINDEDD--DTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKG 427
A +L + K DE + V +++L + +G +IGK G + +I T + IS
Sbjct: 258 ACRMILEIMQKEADETKLAEEVPLKILAHNGFVGRLIGKEGRNLKKIEHETGTKITISSL 317
Query: 428 DKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKD-----RDGSRNPPVGADHIY 482
+ + + V G + + +A ++I+ +LR+ D + + P + +
Sbjct: 318 QDLSIYNP-ERTITVRGTIEACANAEIEIMKKLREAFENDMLAVNQQANLIPGLNLSALG 376
Query: 483 SSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSY 542
TG+S+ P PP GP G + S Y P+ + S Y
Sbjct: 377 IFSTGLSVLP-----PPAGPRG-------------VPPSPPY---------HPFATHSGY 409
Query: 543 SSKLYG-----------GLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSD 591
S LY P T+ + +P AVG +IGK G+++ + + +GA+I+++
Sbjct: 410 FSSLYPHHHFGPFPHHHSYPEQETVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAP 469
Query: 592 SKSSR-GDRVALISGTPEQKRAAENLI 617
++ +R+ +I+G PE + A+ I
Sbjct: 470 AEGPDVSERMVIITGPPEAQFKAQGRI 496
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 93/427 (21%), Positives = 173/427 (40%), Gaps = 58/427 (13%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKEDVEV 98
RIL P +G++IGK G I +I ++T++RV + GA ++ VTI++
Sbjct: 201 RILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHA---------- 250
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
E A +L++ A+ + K E+ +IL + +IGK
Sbjct: 251 -----TPEGTSEACRMILEIMQKEAD--------ETKLAEEVPLKILAHNGFVGRLIGKE 297
Query: 159 GATIKRLRSKTRTSIKVTP-KDAS--EPTHSCAMEFDNFVLISGESEAVKKALFAISAIM 215
G +K++ +T T I ++ +D S P + + + E E +KK A M
Sbjct: 298 GRNLKKIEHETGTKITISSLQDLSIYNPERTITVRGTIEACANAEIEIMKKLREAFENDM 357
Query: 216 YKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPD 275
+ + ++ P + + + G++ +LP + P G P
Sbjct: 358 LAVNQQANLI---------PGLNLSAL-------GIFSTGLSVLPPPAGPR--GVPPSPP 399
Query: 276 LQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQ 335
+A + S E+ + + P +G +IGK G IK + +
Sbjct: 400 YHPFATHSGYFSSLYPHHHFGPFPHHHSYPEQETVSLFIPTQAVGAIIGKKGAHIKQLAR 459
Query: 336 ASGAQIDVDDTK--DNRDECVITVTAIESPDDIKSMA---VEAVLLLQTKINDEDDDTVT 390
+GA I + + D + VI I P + + A + L + N +++ +
Sbjct: 460 FAGASIKIAPAEGPDVSERMVI----ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLE 515
Query: 391 IRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDE-LVEVVGEVGSV 449
+ V S G +IGK G +NE++ T A+V + + P D N+E +V ++G +
Sbjct: 516 AHIRVPSSTAGRVIGKGGKTVNELQNLTSAEVIVPRDQTP---DENEEVIVRIIGHFFAS 572
Query: 450 RDALVQI 456
+ A +I
Sbjct: 573 QTAQRKI 579
>gi|384248562|gb|EIE22046.1| hypothetical protein COCSUDRAFT_43031 [Coccomyxa subellipsoidea
C-169]
Length = 243
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 89/185 (48%), Gaps = 19/185 (10%)
Query: 11 QRDNDRDGKNQKRRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARV 70
+R +DRDG +R +G + +YR+L +GSVIGK+G ++ +IR ET AR+
Sbjct: 77 RRYDDRDGPPDAKRQAIGAAEGPQTETVYRLLVQSKKVGSVIGKAGTIVKAIRDETGARI 136
Query: 71 KVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANAT 130
+VV+ P +RV+ I + + AAQ+AL KVHA V
Sbjct: 137 RVVEGVPNCDERVIVISARSDAARHTD------------AAQEALFKVHA----RVHEHE 180
Query: 131 DNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAME 190
+ ++LV +Q+ +IGKAGA IK +R + IK+ P + P C +
Sbjct: 181 EGPHPPPANATTRMLVCHTQAGCLIGKAGAIIKEIREASGAHIKILPAEDLPP---CGLS 237
Query: 191 FDNFV 195
D V
Sbjct: 238 NDRVV 242
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 83/151 (54%), Gaps = 9/151 (5%)
Query: 300 VGASQ--SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITV 357
+GA++ E V R+L K+G VIGK G +K+IR +GA+I V + N DE VI +
Sbjct: 93 IGAAEGPQTETVYRLLVQSKKVGSVIGKAGTIVKAIRDETGARIRVVEGVPNCDERVIVI 152
Query: 358 TAIESPDDIKSMAVEAVLLLQTKINDEDDD------TVTIRLLVSSKVIGCIIGKSGSII 411
+A A EA+ + ++++ ++ T R+LV GC+IGK+G+II
Sbjct: 153 SARSDAARHTDAAQEALFKVHARVHEHEEGPHPPPANATTRMLVCHTQAGCLIGKAGAII 212
Query: 412 NEIRKRTKADVRISKG-DKPKCADANDELVE 441
EIR+ + A ++I D P C +ND +V+
Sbjct: 213 KEIREASGAHIKILPAEDLPPCGLSNDRVVQ 243
>gi|242040159|ref|XP_002467474.1| hypothetical protein SORBIDRAFT_01g028800 [Sorghum bicolor]
gi|241921328|gb|EER94472.1| hypothetical protein SORBIDRAFT_01g028800 [Sorghum bicolor]
Length = 452
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 101/184 (54%), Gaps = 17/184 (9%)
Query: 38 IYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVE 97
++R++ P +GS+IG+ G++I + +ET+ARV++++ GA +R+V V KED
Sbjct: 51 VFRLVVPVLKVGSIIGRKGELIKRLVEETKARVRILEGPVGATERIVL----VSGKEDPG 106
Query: 98 VDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEEC--QILVPSSQSANII 155
++ L A DAL++V + A + + C ++LVP +Q+ N+I
Sbjct: 107 LE--------LPPAMDALMRVFKRVIGITDGAAEGTQAAATPGVCAARLLVPGAQAINLI 158
Query: 156 GKAGATIKRLRSKTRTSIKVTPKDASE-PTHSCAMEFDNFVLISGESEAVKKALFAISAI 214
GK GATIK ++ T +I+V D E P + + + + I G++E V KAL A+S
Sbjct: 159 GKQGATIKAIQESTGATIRVISVDERERPFY--VTDDERIIEIQGDTEKVLKALQAVSNH 216
Query: 215 MYKF 218
+ KF
Sbjct: 217 LRKF 220
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 86/349 (24%), Positives = 145/349 (41%), Gaps = 52/349 (14%)
Query: 309 VIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKS 368
V R++ P K+G +IG+ G IK + + + A++ + + E ++ V+ E P
Sbjct: 51 VFRLVVPVLKVGSIIGRKGELIKRLVEETKARVRILEGPVGATERIVLVSGKEDPGLELP 110
Query: 369 MAVEAVLLLQTKINDEDDDTV------------TIRLLVSSKVIGCIIGKSGSIINEIRK 416
A++A++ + ++ D RLLV +IGK G+ I I++
Sbjct: 111 PAMDALMRVFKRVIGITDGAAEGTQAAATPGVCAARLLVPGAQAINLIGKQGATIKAIQE 170
Query: 417 RTKADVRISKGD---KPKCADANDELVEVVGEVGSVRDALVQIILRLR----DDAL---- 465
T A +R+ D +P ++ ++E+ G+ V AL + LR D ++
Sbjct: 171 STGATIRVISVDERERPFYVTDDERIIEIQGDTEKVLKALQAVSNHLRKFLVDHSVLPLF 230
Query: 466 --------KDRDGS-----RNPPVGADHIYSSGTGISMPPLL--PSIPPVGPLG-YDQRA 509
+DR+G +P +G+ + + PP + I PV Y +R
Sbjct: 231 EKTNTTVSQDRNGDGWSDMSHPSIGSAQV-------NQPPSVVDEYILPVKRESLYLERE 283
Query: 510 DSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVI 569
S SLYG P G + G L +T + +P +I
Sbjct: 284 PLVDHNIHRSGVSLYGRDPALSTLRPSGIHGA------GPLLTQITQTMQIPLTYAEDII 337
Query: 570 GKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQ 618
G G+N+A IR SGA + + +S S D I GT Q +AA+ LIQ
Sbjct: 338 GVKGANIAYIRANSGAVVTIQESLGSPDDITVEIKGTSSQVQAAQQLIQ 386
>gi|417410720|gb|JAA51826.1| Putative polyc-binding alphacp-1, partial [Desmodus rotundus]
Length = 440
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 156/332 (46%), Gaps = 52/332 (15%)
Query: 305 SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPD 364
S L +R+L ++G +IGK G T+K IR+ S A+I + + + E + T+T
Sbjct: 52 SVTLTLRMLMQGKEVGSIIGKKGETVKRIREQSSARITISE--GSCPERITTITGS---- 105
Query: 365 DIKSMAVEAVLLLQTKINDED------------DDTVTIRLLVSSKVIGCIIGKSGSIIN 412
+ AV ++ K+ DED VT+RL++ + G +IGK+G+ I
Sbjct: 106 --TAAVFHAVSMIAFKL-DEDLCSAPANGGTVSRPPVTLRLVIPASQCGSLIGKAGTKIK 162
Query: 413 EIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSR 472
EIR+ T A V+++ P ++ + V V G V DA++ + ++ L+
Sbjct: 163 EIRETTGAQVQVAGDLLP---NSTERAVTVSG----VPDAIILCVRQICAVILE------ 209
Query: 473 NPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMG 532
+PP GA Y +S+ +L L +Q G ++ + + LS
Sbjct: 210 SPPKGATIPYHPS--LSLGTVL--------LSANQGFSVQGQYGAVTPAEVTKLQQLSGH 259
Query: 533 DSPYGSMSSYSSKLYGGLPPPL---TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEM 589
P+ S S + GL P + E LVP + +G VIG+ GS ++ IR++SGA I++
Sbjct: 260 AVPFASPS-----MVPGLDPGAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI 314
Query: 590 SDSKSSRGDRVALISGTPEQKRAAENLIQAFI 621
+ G+R I+G+P A+ LI A +
Sbjct: 315 GNQAEGAGERHVTITGSPVSIALAQYLITACL 346
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 139/342 (40%), Gaps = 56/342 (16%)
Query: 24 RINEKDEKGNEE-----SVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPG 78
R++ D EE ++ R+L +GS+IGK G+ + IR+++ AR+ + +
Sbjct: 37 RMSSSDAGLEEEPELSVTLTLRMLMQGKEVGSIIGKKGETVKRIREQSSARITISEG--S 94
Query: 79 AKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKE 138
+R+ TI F E LC+A + +
Sbjct: 95 CPERITTITGSTAAVFHAVSMIAFKLDEDLCSA-----------------PANGGTVSRP 137
Query: 139 KEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLIS 198
++++P+SQ ++IGKAG IK +R T ++V T + V +S
Sbjct: 138 PVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNST-------ERAVTVS 190
Query: 199 GESEAVKKALFAISAIMYKFSPR-EDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADP 257
G +A+ + I A++ + P+ IP ++ ++ S + G Y P
Sbjct: 191 GVPDAIILCVRQICAVILESPPKGATIPYHPSLSLG---TVLLSANQGFSVQGQYGAVTP 247
Query: 258 ILPSRSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGL-VGASQSEELVIRVLCPF 316
A V LQ +G+ P S S+V GL GA S + L P
Sbjct: 248 -------------AEVTKLQQL--SGHAVPFASP--SMVPGLDPGAQTSSQ---EFLVPN 287
Query: 317 NKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
+ IG VIG+ G I IRQ SGA I + + + E +T+T
Sbjct: 288 DLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTIT 329
>gi|351698877|gb|EHB01796.1| Poly(rC)-binding protein 4 [Heterocephalus glaber]
Length = 443
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 155/329 (47%), Gaps = 52/329 (15%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
L +R+L ++G +IGK G T+K IR+ S A+I + + + E + T+T
Sbjct: 58 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE--GSCPERITTITGS------T 109
Query: 368 SMAVEAVLLLQTKINDED------------DDTVTIRLLVSSKVIGCIIGKSGSIINEIR 415
+ AV ++ K+ DED VT+RL++ + G +IGK+G+ I EIR
Sbjct: 110 AAVFHAVSMIAFKL-DEDLCAAPANGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIR 168
Query: 416 KRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPP 475
+ T A V+++ P ++ + V V G V DA++ + ++ L+ +PP
Sbjct: 169 ETTGAQVQVAGDLLP---NSTERAVTVSG----VPDAIILCVRQICAVILE------SPP 215
Query: 476 VGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSP 535
GA Y +S+ +L L +Q G ++ + + LS P
Sbjct: 216 KGATIPYHPS--LSLGTVL--------LSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVP 265
Query: 536 YGSMSSYSSKLYGGLPPPL---TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDS 592
+ S S + GL P + E LVP + +G VIG+ GS ++ IR++SGA I++ +
Sbjct: 266 FASPS-----VVPGLDPSAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQ 320
Query: 593 KSSRGDRVALISGTPEQKRAAENLIQAFI 621
G+R I+G+P A+ LI A +
Sbjct: 321 AEGAGERHVTITGSPVSIALAQYLITACL 349
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 139/341 (40%), Gaps = 54/341 (15%)
Query: 24 RINEKDEKGNEE-----SVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPG 78
R++ D EE ++ R+L +GS+IGK G+ + IR+++ AR+ + +
Sbjct: 40 RMSSSDAGLEEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--S 97
Query: 79 AKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKE 138
+R+ TI F E LCAA + +
Sbjct: 98 CPERITTITGSTAAVFHAVSMIAFKLDEDLCAA-----------------PANGGSVSRP 140
Query: 139 KEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLIS 198
++++P+SQ ++IGKAG IK +R T ++V T + V +S
Sbjct: 141 PVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNST-------ERAVTVS 193
Query: 199 GESEAVKKALFAISAIMYKFSPR-EDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADP 257
G +A+ + I A++ + P+ IP ++ ++ S + G Y P
Sbjct: 194 GVPDAIILCVRQICAVILESPPKGATIPYHPSLSLG---TVLLSANQGFSVQGQYGAVTP 250
Query: 258 ILPSRSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFN 317
A V LQ +G+ P S S+V GL ++Q+ L P +
Sbjct: 251 -------------AEVTKLQQL--SGHAVPFASP--SVVPGLDPSAQTSSQ--EFLVPND 291
Query: 318 KIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
IG VIG+ G I IRQ SGA I + + + E +T+T
Sbjct: 292 LIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTIT 332
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 384 EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVV 443
E T+T+R+L+ K +G IIGK G + IR+++ A + IS+G P + + +
Sbjct: 53 ELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCP------ERITTIT 106
Query: 444 GEVGSVRDALVQIILRLRDD 463
G +V A+ I +L +D
Sbjct: 107 GSTAAVFHAVSMIAFKLDED 126
>gi|356549146|ref|XP_003542958.1| PREDICTED: poly(rC)-binding protein 3-like [Glycine max]
Length = 436
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 102/196 (52%), Gaps = 23/196 (11%)
Query: 27 EKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTI 86
EK G ++R++ P +GS+IG+ G++I +ET+AR++V+D G DR+V I
Sbjct: 36 EKRWPGWPGHCVFRLIVPVLKVGSIIGRKGELIKKTCEETKARIRVLDGAVGTSDRIVLI 95
Query: 87 YSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKE----EC 142
KED+E PL A DA+++V V+ ++ D K K
Sbjct: 96 ----SGKEDLEA--------PLSPAMDAVIRVF----KRVSGFSEIDAKNKASAVAFCSV 139
Query: 143 QILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESE 202
++LV S+Q+ N+IGK G+ IK ++ T S++V D P ++ A E V + GE+
Sbjct: 140 RLLVASTQAINLIGKQGSLIKSIQENTGASVRVLSGD-EVPFYAAADE--RIVELQGEAM 196
Query: 203 AVKKALFAISAIMYKF 218
V KAL A+ + KF
Sbjct: 197 KVLKALEAVVGHLRKF 212
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 94/341 (27%), Positives = 160/341 (46%), Gaps = 36/341 (10%)
Query: 309 VIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKS 368
V R++ P K+G +IG+ G IK + + A+I V D + ++ ++ E + S
Sbjct: 47 VFRLIVPVLKVGSIIGRKGELIKKTCEETKARIRVLDGAVGTSDRIVLISGKEDLEAPLS 106
Query: 369 MAVEAVLLLQTKINDEDD----------DTVTIRLLVSSKVIGCIIGKSGSIINEIRKRT 418
A++AV+ + +++ + ++RLLV+S +IGK GS+I I++ T
Sbjct: 107 PAMDAVIRVFKRVSGFSEIDAKNKASAVAFCSVRLLVASTQAINLIGKQGSLIKSIQENT 166
Query: 419 KADVRISKGDK-PKCADANDELVEVVGEVGSVRDALVQIILRLR-----DDALKDRDGSR 472
A VR+ GD+ P A A++ +VE+ GE V AL ++ LR + L + +
Sbjct: 167 GASVRVLSGDEVPFYAAADERIVELQGEAMKVLKALEAVVGHLRKFLVDNSVLPLFEKTY 226
Query: 473 NPPVGADHIYSSGTGISMPPL----LPSIPPVGPLGYDQ---RADSGSGI-GMLSSSSLY 524
N + + + T + P L PSI PL + AD S + +L S++
Sbjct: 227 NATISQER-QADTTWVDKPSLHSASQPSIVTDIPLSTKRDSLFADRESQLDSLLPPSTMS 285
Query: 525 GYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVL----VPANAVGKVIGKAGSNLANIR 580
YG DS + SS L PP+ V+ +P + +IG G+N+ IR
Sbjct: 286 MYGQ----DSSLSGLR--SSALSRPSAPPIVTTVIQTMQIPLSYAEDIIGIQGTNIEYIR 339
Query: 581 KISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFI 621
+ SGA + + +S+ + + I GT Q + A+ LIQ I
Sbjct: 340 RTSGAILTVQESRVP-DEIIVEIKGTSSQVQTAQQLIQEVI 379
>gi|195972875|ref|NP_001108030.2| insulin-like growth factor 2 mRNA-binding protein 2 [Danio rerio]
gi|124021198|gb|ABM88867.1| IGF2 mRNA-binding protein 2 [Danio rerio]
Length = 607
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 161/330 (48%), Gaps = 31/330 (9%)
Query: 300 VGASQSE-ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
+G+ Q + + +R+L P +G +IGK G TIK+I + + +++D+ K+N +T
Sbjct: 189 LGSRQKQPDFPLRMLVPTQFVGAIIGKEGLTIKNITKQTQSKVDIHR-KENAGAAEKPIT 247
Query: 359 AIESPDDIKSMAVEAVLLLQTK--INDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
+P+ S A ++ + K ++ + + + +++L + ++G +IGK G + +I +
Sbjct: 248 IHSTPEGC-STACHMIMDIMQKEAVDTKVTEDIPLKILAHNSLVGRLIGKEGRNLKKIEE 306
Query: 417 RTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLR-----DDALKDRDGS 471
T+ + IS + ++ V G + + A V+I+ +LR D A ++ +
Sbjct: 307 DTETKITISSLQDLTIYNPERTII-VKGSIEACCRAEVEIMKKLREAYENDVAAINQQSN 365
Query: 472 RNP--PVGADHIYSSGTGISMPPLLP-SIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGS 528
P + A I+S+G + P P IPPV P GY+ S +G LYG
Sbjct: 366 LIPGLSLSALGIFSTGLSVLPPAAGPRGIPPVPPTGYNPFLGHSSQLG-----GLYGV-- 418
Query: 529 LSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIE 588
P +S ++ P + + +P AVG +IGK G ++ + + +GA+I+
Sbjct: 419 -----PPASGISHQHTQA----PEQEVVYLFIPTQAVGAIIGKKGQHIKQLARFAGASIK 469
Query: 589 MSDSKS-SRGDRVALISGTPEQKRAAENLI 617
++ ++S R+ +I+G PE + A+ I
Sbjct: 470 IAPAESPDVTQRMVIITGPPEAQFKAQGRI 499
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 106/469 (22%), Positives = 183/469 (39%), Gaps = 98/469 (20%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKEDVEV 98
R+L P +G++IGK G I +I ++T+++V + GA ++ +TI+S
Sbjct: 201 RMLVPTQFVGAIIGKEGLTIKNITKQTQSKVDIHRKENAGAAEKPITIHS---------- 250
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
E A ++ + A D K E +IL +S +IGK
Sbjct: 251 -----TPEGCSTACHMIMDIMQKEAV--------DTKVTEDIPLKILAHNSLVGRLIGKE 297
Query: 159 GATIKRLRSKTRTSIKVTP-KDAS--EPTHSCAMEFDNFVLISGESEAVKKALFAISAIM 215
G +K++ T T I ++ +D + P + ++ E E +KK A +
Sbjct: 298 GRNLKKIEEDTETKITISSLQDLTIYNPERTIIVKGSIEACCRAEVEIMKKLREAYENDV 357
Query: 216 YKFSPRED-IP---------LETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVP 265
+ + + IP T + PP+ P +P PP G +P L S
Sbjct: 358 AAINQQSNLIPGLSLSALGIFSTGLSVLPPAAG-PRGIPPVPPTGY----NPFLGHSS-- 410
Query: 266 SILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGK 325
+ G VP G + P E+ V+ + P +G +IGK
Sbjct: 411 QLGGLYGVPPASGISHQHTQAP------------------EQEVVYLFIPTQAVGAIIGK 452
Query: 326 GGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAV-----EAVLLLQTK 380
G IK + + +GA I + ESPD + M + EA Q +
Sbjct: 453 KGQHIKQLARFAGASIKI--------------APAESPDVTQRMVIITGPPEAQFKAQGR 498
Query: 381 I----------NDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKP 430
I +++ + + V S G +IGK G +NE++ T A+V + + P
Sbjct: 499 IFGKLKEENFFTAKEEVKLETHIKVPSSAAGRVIGKGGKTVNELQNLTSAEVIVPRDQTP 558
Query: 431 KCADANDE-LVEVVGEVGSVRDA---LVQIILRLRDDALKDRDGSRNPP 475
D NDE V++ G + + A + +II +++ K + G+ P
Sbjct: 559 ---DENDEVFVKISGHFFASQTAQRKIREIIQQVKQQEQKHQQGAPTTP 604
Score = 46.6 bits (109), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 80/200 (40%), Gaps = 30/200 (15%)
Query: 25 INEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDP-FPGAKDRV 83
I+ + + E+ V+Y + P +G++IGK G+ I + + A +K+ P R+
Sbjct: 424 ISHQHTQAPEQEVVY-LFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAESPDVTQRM 482
Query: 84 VTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQ 143
V I +A K I + K + K E
Sbjct: 483 VII----------------------TGPPEAQFKAQGRIFGKLKEENFFTAKEEVKLETH 520
Query: 144 ILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEA 203
I VPSS + +IGK G T+ L++ T + + P+D + + + FV ISG A
Sbjct: 521 IKVPSSAAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPDEND-----EVFVKISGHFFA 574
Query: 204 VKKALFAISAIMYKFSPRED 223
+ A I I+ + +E
Sbjct: 575 SQTAQRKIREIIQQVKQQEQ 594
>gi|195481990|ref|XP_002101863.1| GE15370 [Drosophila yakuba]
gi|194189387|gb|EDX02971.1| GE15370 [Drosophila yakuba]
Length = 566
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 152/333 (45%), Gaps = 49/333 (14%)
Query: 298 GLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITV 357
G+ G + + +R+L +G +IG+ G TI++I Q S A++DV K+N ++
Sbjct: 69 GMPGPGRQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHR-KENVGSLEKSI 127
Query: 358 TAIESPDDIKSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKR 417
T +P++ + + ++Q + + + +++L + +IG IIGKSG+ I I +
Sbjct: 128 TIYGNPENCTNACKRILEVMQQEALSTNKGEICLKILAHNNLIGRIIGKSGNTIKRIMQD 187
Query: 418 TKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVG 477
T + +S + + + ++ V G + ++ A QI +LR D
Sbjct: 188 TDTKITVSSINDINSFNL-ERIITVKGLIENMSRAENQISTKLRQSYENDLQ-------- 238
Query: 478 ADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYG 537
+M P P + P+ S G GM+ ++S+ P+
Sbjct: 239 -----------AMAPQSLMFPGLHPMAM----MSTPGNGMVFNTSM-----------PFP 272
Query: 538 SMSSYS-SKLYGGLPPPL-------TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEM 589
S S++ SK + PP+ T + +P NAVG +IG GS++ +I + S A++++
Sbjct: 273 SCQSFAMSKTPASVVPPVFPNDLQETTYLYIPNNAVGAIIGTKGSHIRSIMRFSNASLKI 332
Query: 590 SDSKS-----SRGDRVALISGTPEQKRAAENLI 617
+ + + +R I GTPE + A+ +I
Sbjct: 333 APLDADKPLDQQTERKVTIVGTPEGQWKAQYMI 365
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 105/455 (23%), Positives = 197/455 (43%), Gaps = 75/455 (16%)
Query: 12 RDNDRDGKNQKRRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVK 71
++ R +NQ+ G + RIL ++G++IG+ G I +I Q++RARV
Sbjct: 54 KNQRRSQRNQRNPYPGMPGPGRQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVD 113
Query: 72 VV-DPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANAT 130
V G+ ++ +TIY + ++ + C +++ A N
Sbjct: 114 VHRKENVGSLEKSITIYGNPENCTNA------------CKRILEVMQQEALSTN------ 155
Query: 131 DNDKKRKEKEEC-QILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAM 189
+ E C +IL ++ IIGK+G TIKR+ T T I V+ + +
Sbjct: 156 -------KGEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITVSSINDIN-----SF 203
Query: 190 EFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPG 249
+ + + G E + +A IS + + S D+ AP S++ P ++P
Sbjct: 204 NLERIITVKGLIENMSRAENQISTKLRQ-SYENDLQAM-----APQSLMFPG---LHPMA 254
Query: 250 GLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELV 309
+ + ++ + S+P P Q +A + T S+V + E
Sbjct: 255 MMSTPGNGMVFNTSMP-------FPSCQSFA-------MSKTPASVVPPVFPNDLQETTY 300
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQI-----DVDDTKDNRDECVITVTAIESPD 364
+ + P N +G +IG G I+SI + S A + D D D + E +T+ + +P+
Sbjct: 301 LYI--PNNAVGAIIGTKGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTI--VGTPE 356
Query: 365 DIKSMAVEAVLLLQTKINDE------DDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRT 418
+A ++ K+ +E DD +T+ LLV+S +G IIGK G + E+++ T
Sbjct: 357 G----QWKAQYMIFEKMREEGFMCGTDDVRLTVELLVASSQVGRIIGKGGQNVRELQRVT 412
Query: 419 KADVRISKGDKPKCADANDEL-VEVVGEVGSVRDA 452
+ +++ + + ++E V ++G SV+ A
Sbjct: 413 GSVIKLPEHALAPPSGGDEETPVHIIGPFYSVQSA 447
Score = 38.9 bits (89), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 30/38 (78%)
Query: 554 LTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSD 591
LT+E+LV ++ VG++IGK G N+ +++++G+ I++ +
Sbjct: 383 LTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIKLPE 420
>gi|195350752|ref|XP_002041902.1| GM11285 [Drosophila sechellia]
gi|194123707|gb|EDW45750.1| GM11285 [Drosophila sechellia]
Length = 566
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 152/333 (45%), Gaps = 49/333 (14%)
Query: 298 GLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITV 357
G+ G + + +R+L +G +IG+ G TI++I Q S A++DV K+N ++
Sbjct: 68 GMPGPGRQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHR-KENVGSLEKSI 126
Query: 358 TAIESPDDIKSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKR 417
T +P++ + + ++Q + + + +++L + +IG IIGKSG+ I I +
Sbjct: 127 TIYGNPENCTNACKRILEVMQQEAISTNKGEICLKILAHNNLIGRIIGKSGNTIKRIMQD 186
Query: 418 TKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVG 477
T + +S + + + ++ V G + ++ A QI +LR D
Sbjct: 187 TDTKITVSSINDINSFNL-ERIITVKGLIENMSRAENQISTKLRQSYENDLQ-------- 237
Query: 478 ADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYG 537
+M P P + P+ S G GM+ ++S+ P+
Sbjct: 238 -----------AMAPQSLMFPGLHPMAM----MSTPGNGMVFNTSM-----------PFP 271
Query: 538 SMSSYS-SKLYGGLPPPL-------TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEM 589
S S++ SK + PP+ T + +P NAVG +IG GS++ +I + S A++++
Sbjct: 272 SCQSFAMSKTPASVVPPVFPNDLQETTYLYIPNNAVGAIIGTKGSHIRSIMRFSNASLKI 331
Query: 590 SDSKS-----SRGDRVALISGTPEQKRAAENLI 617
+ + + +R I GTPE + A+ +I
Sbjct: 332 APLDADKPLDQQTERKVTIVGTPEGQWKAQYMI 364
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 105/455 (23%), Positives = 197/455 (43%), Gaps = 75/455 (16%)
Query: 12 RDNDRDGKNQKRRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVK 71
++ R +NQ+ G + RIL ++G++IG+ G I +I Q++RARV
Sbjct: 53 KNQRRSQRNQRNPYPGMPGPGRQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVD 112
Query: 72 VV-DPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANAT 130
V G+ ++ +TIY + ++ + C +++ A N
Sbjct: 113 VHRKENVGSLEKSITIYGNPENCTNA------------CKRILEVMQQEAISTN------ 154
Query: 131 DNDKKRKEKEEC-QILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAM 189
+ E C +IL ++ IIGK+G TIKR+ T T I V+ + +
Sbjct: 155 -------KGEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITVSSINDIN-----SF 202
Query: 190 EFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPG 249
+ + + G E + +A IS + + S D+ AP S++ P ++P
Sbjct: 203 NLERIITVKGLIENMSRAENQISTKLRQ-SYENDLQAM-----APQSLMFPG---LHPMA 253
Query: 250 GLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELV 309
+ + ++ + S+P P Q +A + T S+V + E
Sbjct: 254 MMSTPGNGMVFNTSMP-------FPSCQSFA-------MSKTPASVVPPVFPNDLQETTY 299
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQI-----DVDDTKDNRDECVITVTAIESPD 364
+ + P N +G +IG G I+SI + S A + D D D + E +T+ + +P+
Sbjct: 300 LYI--PNNAVGAIIGTKGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTI--VGTPE 355
Query: 365 DIKSMAVEAVLLLQTKINDE------DDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRT 418
+A ++ K+ +E DD +T+ LLV+S +G IIGK G + E+++ T
Sbjct: 356 G----QWKAQYMIFEKMREEGFMCGTDDVRLTVELLVASSQVGRIIGKGGQNVRELQRVT 411
Query: 419 KADVRISKGDKPKCADANDEL-VEVVGEVGSVRDA 452
+ +++ + + ++E V ++G SV+ A
Sbjct: 412 GSVIKLPEHALAPPSGGDEETPVHIIGLFYSVQSA 446
Score = 38.9 bits (89), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 30/38 (78%)
Query: 554 LTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSD 591
LT+E+LV ++ VG++IGK G N+ +++++G+ I++ +
Sbjct: 382 LTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIKLPE 419
>gi|194889982|ref|XP_001977205.1| GG18899 [Drosophila erecta]
gi|190648854|gb|EDV46132.1| GG18899 [Drosophila erecta]
Length = 568
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 152/333 (45%), Gaps = 49/333 (14%)
Query: 298 GLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITV 357
G+ G + + +R+L +G +IG+ G TI++I Q S A++DV K+N ++
Sbjct: 69 GMPGPGRQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHR-KENVGSLEKSI 127
Query: 358 TAIESPDDIKSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKR 417
T +P++ + + ++Q + + + +++L + +IG IIGKSG+ I I +
Sbjct: 128 TIYGNPENCTNACKRILEVMQQEALSTNKGEICLKILAHNNLIGRIIGKSGNTIKRIMQD 187
Query: 418 TKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVG 477
T + +S + + + ++ V G + ++ A QI +LR D
Sbjct: 188 TDTKITVSSINDINSFNL-ERIITVKGLIENMSRAENQISTKLRQSYENDLQ-------- 238
Query: 478 ADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYG 537
+M P P + P+ S G GM+ ++S+ P+
Sbjct: 239 -----------AMAPQSLMFPGLHPMAM----MSTPGNGMVFNTSM-----------PFP 272
Query: 538 SMSSYS-SKLYGGLPPPL-------TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEM 589
S S++ SK + PP+ T + +P NAVG +IG GS++ +I + S A++++
Sbjct: 273 SCQSFAMSKTPASVVPPVFPNDLQETTYLYIPNNAVGAIIGTKGSHIRSIMRFSNASLKI 332
Query: 590 SDSKS-----SRGDRVALISGTPEQKRAAENLI 617
+ + + +R I GTPE + A+ +I
Sbjct: 333 APLDADKPLDQQTERKVTIVGTPEGQWKAQFMI 365
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 112/478 (23%), Positives = 205/478 (42%), Gaps = 84/478 (17%)
Query: 12 RDNDRDGKNQKRRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVK 71
++ R +NQ+ G + RIL ++G++IG+ G I +I Q++RARV
Sbjct: 54 KNQRRSQRNQRNPYPGMPGPGRQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVD 113
Query: 72 VV-DPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANAT 130
V G+ ++ +TIY + ++ + C +++ A N
Sbjct: 114 VHRKENVGSLEKSITIYGNPENCTNA------------CKRILEVMQQEALSTN------ 155
Query: 131 DNDKKRKEKEEC-QILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAM 189
+ E C +IL ++ IIGK+G TIKR+ T T I V+ + +
Sbjct: 156 -------KGEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITVSSINDIN-----SF 203
Query: 190 EFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPG 249
+ + + G E + +A IS + + S D+ AP S++ P ++P
Sbjct: 204 NLERIITVKGLIENMSRAENQISTKLRQ-SYENDLQAM-----APQSLMFPG---LHPMA 254
Query: 250 GLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELV 309
+ + ++ + S+P P Q +A + T S+V + E
Sbjct: 255 MMSTPGNGMVFNTSMP-------FPSCQSFA-------MSKTPASVVPPVFPNDLQETTY 300
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQI-----DVDDTKDNRDECVITVTAIESPD 364
+ + P N +G +IG G I+SI + S A + D D D + E +T+ + +P+
Sbjct: 301 LYI--PNNAVGAIIGTKGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTI--VGTPE 356
Query: 365 DIKSMAVEAVLLLQTKINDE------DDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRT 418
+A ++ K+ +E DD +T+ LLV+S +G IIGK G + E+++ T
Sbjct: 357 G----QWKAQFMIFEKMREEGFMCGTDDVRLTVELLVASSQVGRIIGKGGQNVRELQRVT 412
Query: 419 KADVRISKGDKPKCADANDEL-VEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPP 475
+ +++ + + ++E V ++G SV+ A R+R L S NPP
Sbjct: 413 GSVIKLPEHALAPPSGGDEETPVHIIGPFYSVQSAQ----RRIRAMML-----STNPP 461
Score = 38.5 bits (88), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 30/38 (78%)
Query: 554 LTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSD 591
LT+E+LV ++ VG++IGK G N+ +++++G+ I++ +
Sbjct: 383 LTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIKLPE 420
>gi|443687982|gb|ELT90806.1| hypothetical protein CAPTEDRAFT_1308 [Capitella teleta]
Length = 333
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 156/347 (44%), Gaps = 51/347 (14%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI- 366
+ +R++ + G +IGK G +K R+ SGA+I++ D+ + E ++TVT + D I
Sbjct: 2 VTLRMIMQGKEAGSIIGKKGDNVKKFREDSGAKINISDS--SCPERIVTVTG--TTDQIF 57
Query: 367 KSMAVEAVLLLQTKINDEDDDT-----VTIRLLVSSKVIGCIIGKSGSIINEIRKRTKAD 421
K+ + + +N + T VT+RL+V + G +IGK G+ I EIR+ T A
Sbjct: 58 KAFTMICKKFEEDIVNTHNSTTLPKPPVTLRLIVPASQCGSLIGKGGAKIKEIRELTGAS 117
Query: 422 VRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKD-----RDGSRNPPV 476
++++ P ++ + V V G+ ++ + I + + K R PPV
Sbjct: 118 IQVASEMLP---NSTERAVTVSGQADAITQCIYNICCVMLESPPKGATIPYRPKPCVPPV 174
Query: 477 ------GADHIYSSGTGISMPPLLPS------------IPPVGPLGYDQRADSGSGIGML 518
G G I +PP P+ +PP + R + S I ++
Sbjct: 175 MLPSSCGGQAFSIQGQQILLPPSHPNATQPDVSPHCVPLPPPCFISLRARLQTHSLICII 234
Query: 519 SSSSLYGYGSLSMGDSPY------GSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKA 572
G + P G ++ S++ T E+ +P + +G +IG+
Sbjct: 235 IRDVYPGMNAAMAAGIPQFAPRQAGPGANMSAQ---------THEMTIPNDLIGCIIGRG 285
Query: 573 GSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQA 619
G+ + IR++SGATI+++++ DR I G+ E AA+ +I A
Sbjct: 286 GAKINEIRQLSGATIKIANADEGSSDRKVTIMGSLETIHAAQYMINA 332
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 79/340 (23%), Positives = 141/340 (41%), Gaps = 68/340 (20%)
Query: 49 GSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPL 108
GS+IGK G + R+++ A++ + D +R+VT+ D F
Sbjct: 14 GSIIGKKGDNVKKFREDSGAKINISDS--SCPERIVTVTG--------TTDQIFK----- 58
Query: 109 CAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSK 168
A + + N ++ K +++VP+SQ ++IGK GA IK +R
Sbjct: 59 -----AFTMICKKFEEDIVNTHNSTTLPKPPVTLRLIVPASQCGSLIGKGGAKIKEIREL 113
Query: 169 TRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPR-EDIPLE 227
T SI+V + T + V +SG+++A+ + ++ I +M + P+ IP
Sbjct: 114 TGASIQVASEMLPNST-------ERAVTVSGQADAITQCIYNICCVMLESPPKGATIPYR 166
Query: 228 TTVREAPPSIIIPSDVP-----------IYPPGGLYPNA-DPILPSRSVPSILGAARVPD 275
+ P +++PS + PP +PNA P + VP L
Sbjct: 167 P--KPCVPPVMLPSSCGGQAFSIQGQQILLPPS--HPNATQPDVSPHCVP--LPPPCFIS 220
Query: 276 LQGYADTG--------NTWP----VYSTGLSLVS------GLVGASQSEELVIRVLCPFN 317
L+ T + +P + G+ + G ++Q+ E+ I P +
Sbjct: 221 LRARLQTHSLICIIIRDVYPGMNAAMAAGIPQFAPRQAGPGANMSAQTHEMTI----PND 276
Query: 318 KIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITV 357
IG +IG+GG I IRQ SGA I + + + + +T+
Sbjct: 277 LIGCIIGRGGAKINEIRQLSGATIKIANADEGSSDRKVTI 316
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Query: 390 TIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSV 449
T + + + +IGCIIG+ G+ INEIR+ + A ++I+ D+ ++D V ++G + ++
Sbjct: 268 THEMTIPNDLIGCIIGRGGAKINEIRQLSGATIKIANADE----GSSDRKVTIMGSLETI 323
Query: 450 RDALVQIILR 459
A I R
Sbjct: 324 HAAQYMINAR 333
Score = 40.0 bits (92), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 32 GNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIY 87
N + + + P+ +IG +IG+ G IN IRQ + A +K+ + G+ DR VTI
Sbjct: 262 ANMSAQTHEMTIPNDLIGCIIGRGGAKINEIRQLSGATIKIANADEGSSDRKVTIM 317
>gi|189194345|ref|XP_001933511.1| Poly(rC)-binding protein 4 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187979075|gb|EDU45701.1| Poly(rC)-binding protein 4 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 434
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 160/332 (48%), Gaps = 43/332 (12%)
Query: 304 QSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESP 363
++ L +R ++ +IGKGG + IR+ SGA+ V D E ++TV+
Sbjct: 122 ETNWLHVRACIGTSEAATIIGKGGENVTQIRRLSGAKCTVSDYSRGAVERILTVSG---- 177
Query: 364 DDIKSMAVEAVLLLQTKINDEDDDTVT--------IRLLVSSKVIGCIIGKSGSIINEIR 415
+ +++ L+++T +N ED +T + +RLL+ +IG IIGK+G I EI+
Sbjct: 178 -QVDAVSKAFGLIVRT-LNQEDLETPSTSTSKAYPMRLLIPHILIGSIIGKAGVRIREIQ 235
Query: 416 KRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPP 475
+ + A + S P ++ + + V+G +V A+ + L + L +R G P
Sbjct: 236 EASNAKLNASDTLLP---NSGERSLIVLGVADAVHIAVYYVAQTLVEQ-LTERFGG---P 288
Query: 476 VGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSP 535
+ + SG ++ P S+ P P Q A +GS S YG + +P
Sbjct: 289 AASQYATRSGMAANVVPGGMSVQPYVP----QPAGAGS-----PSRGPYGGPA---APTP 336
Query: 536 YGSMSSYSSKL---------YGGLP-PPLTLEVLVPANAVGKVIGKAGSNLANIRKISGA 585
YG+ + + G +P PLT ++ +P + VG +IGK G+ + IR++SG+
Sbjct: 337 YGAHPAAAPVAHGGAAPHAAVGAMPGQPLTQQIFIPNDMVGAIIGKGGAKINEIRQLSGS 396
Query: 586 TIEMSDSKSSRGDRVALISGTPEQKRAAENLI 617
I++++ + +R+ I+GT E + A ++
Sbjct: 397 VIKINEPTDNSNERLVTITGTQECNQMALYML 428
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 76/349 (21%), Positives = 141/349 (40%), Gaps = 52/349 (14%)
Query: 23 RRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDR 82
R +N+ + + R ++IGK G+ + IR+ + A+ V D GA +R
Sbjct: 112 RPVNQNQQVDETNWLHVRACIGTSEAATIIGKGGENVTQIRRLSGAKCTVSDYSRGAVER 171
Query: 83 VVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEEC 142
++T+ V DA+ K I + N D + +
Sbjct: 172 ILTVSGQV----------------------DAVSKAFGLIVRTL-NQEDLETPSTSTSKA 208
Query: 143 ---QILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISG 199
++L+P +IIGKAG I+ ++ + K+ D P + +++ G
Sbjct: 209 YPMRLLIPHILIGSIIGKAGVRIREIQEASNA--KLNASDTLLPNSG-----ERSLIVLG 261
Query: 200 ESEAVKKALFAIS-AIMYKFSPREDIPL--ETTVREAPPSIIIPSDVPIYP----PGGLY 252
++AV A++ ++ ++ + + R P + R + ++P + + P P G
Sbjct: 262 VADAVHIAVYYVAQTLVEQLTERFGGPAASQYATRSGMAANVVPGGMSVQPYVPQPAGAG 321
Query: 253 PNADPILPSRSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRV 312
PSR G P G + G + VGA + L ++
Sbjct: 322 S------PSRGP---YGGPAAPTPYGAHPAAAP---VAHGGAAPHAAVGAMPGQPLTQQI 369
Query: 313 LCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIE 361
P + +G +IGKGG I IRQ SG+ I +++ DN +E ++T+T +
Sbjct: 370 FIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPTDNSNERLVTITGTQ 418
>gi|12837891|dbj|BAB23990.1| unnamed protein product [Mus musculus]
Length = 403
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 93/336 (27%), Positives = 157/336 (46%), Gaps = 52/336 (15%)
Query: 301 GASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAI 360
G S L +R+L ++G +IGK G T+K IR+ S A+I + + + E + T+T
Sbjct: 11 GPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE--GSCPERITTITGS 68
Query: 361 ESPDDIKSMAVEAVLLLQTKINDED------------DDTVTIRLLVSSKVIGCIIGKSG 408
+ AV ++ K+ DED VT+RL++ + G +IGK+G
Sbjct: 69 ------TAAVFHAVSMIAFKL-DEDLCAAPANGGSVSRPPVTLRLVIPASQCGSLIGKAG 121
Query: 409 SIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDR 468
+ I EIR+ T A V+++ P ++ + V V G V DA++ + ++ L+
Sbjct: 122 TKIKEIRETTGAQVQVAGDLLP---NSTERAVTVSG----VPDAIILCVRQICAVILE-- 172
Query: 469 DGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGS 528
+PP GA Y +S+ +L L +Q G ++ + +
Sbjct: 173 ----SPPKGATIPYHPS--LSLGTVL--------LSANQGFSVQGQYGAVTPAEVTKLQQ 218
Query: 529 LSMGDSPYGSMSSYSSKLYGGLPPPL---TLEVLVPANAVGKVIGKAGSNLANIRKISGA 585
LS P+ S S + GL P + E LVP + +G VIG+ GS ++ IR++SGA
Sbjct: 219 LSGHAVPFASPS-----VVPGLDPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGA 273
Query: 586 TIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFI 621
I++ + G+R I+G+P A+ LI A +
Sbjct: 274 HIKIGNQAEGAGERHVTITGSPVSIALAQYLITACL 309
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 137/332 (41%), Gaps = 51/332 (15%)
Query: 30 EKGNEESVIY--RILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIY 87
E+G E S+ R+L +GS+IGK G+ + IR+++ AR+ + + +R+ TI
Sbjct: 9 EEGPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTIT 66
Query: 88 SHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVP 147
F E LCAA + + ++++P
Sbjct: 67 GSTAAVFHAVSMIAFKLDEDLCAA-----------------PANGGSVSRPPVTLRLVIP 109
Query: 148 SSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKA 207
+SQ ++IGKAG IK +R T ++V T + V +SG +A+
Sbjct: 110 ASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNST-------ERAVTVSGVPDAIILC 162
Query: 208 LFAISAIMYKFSPR-EDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPS 266
+ I A++ + P+ IP ++ ++ S + G Y P
Sbjct: 163 VRQICAVILESPPKGATIPYHPSLSLG---TVLLSANQGFSVQGQYGAVTP--------- 210
Query: 267 ILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKG 326
A V LQ +G+ P S S+V GL ++Q+ L P + IG VIG+
Sbjct: 211 ----AEVTKLQQL--SGHAVPFASP--SVVPGLDPSTQTSSQ--EFLVPNDLIGCVIGRQ 260
Query: 327 GGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
G I IRQ SGA I + + + E +T+T
Sbjct: 261 GSKISEIRQMSGAHIKIGNQAEGAGERHVTIT 292
>gi|335299138|ref|XP_003358505.1| PREDICTED: poly(rC)-binding protein 4-like isoform 1 [Sus scrofa]
Length = 403
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 155/329 (47%), Gaps = 52/329 (15%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
L +R+L ++G +IGK G T+K IR+ S A+I + + + E + T+T
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE--GSCPERITTITGS------T 69
Query: 368 SMAVEAVLLLQTKINDED------------DDTVTIRLLVSSKVIGCIIGKSGSIINEIR 415
+ AV ++ K+ DED VT+RL++ + G +IGK+G+ I EIR
Sbjct: 70 AAVFHAVSMIAFKL-DEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIR 128
Query: 416 KRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPP 475
+ T A V+++ P ++ + V V G V DA++ + ++ L+ +PP
Sbjct: 129 ETTGAQVQVAGDLLP---NSTERAVTVSG----VPDAIILCVRQICAVILE------SPP 175
Query: 476 VGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSP 535
GA Y +S+ +L L +Q G ++ + + LS P
Sbjct: 176 KGATIPYHPS--LSLGTVL--------LSTNQGFSVQGQYGAVTPAEVTKLQQLSGHAVP 225
Query: 536 YGSMSSYSSKLYGGLPPPL---TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDS 592
+ S S + GL P + E LVP + +G VIG+ GS ++ IR++SGA I++ +
Sbjct: 226 FASPS-----MVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQ 280
Query: 593 KSSRGDRVALISGTPEQKRAAENLIQAFI 621
G+R I+G+P A+ LI A +
Sbjct: 281 AEGAGERHVTITGSPVSIALAQYLITACL 309
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 132/324 (40%), Gaps = 49/324 (15%)
Query: 36 SVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKED 95
++ R+L +GS+IGK G+ + IR+++ AR+ + + +R+ TI
Sbjct: 17 TLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGSTAAVFH 74
Query: 96 VEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANII 155
F E LCAA + + ++++P+SQ ++I
Sbjct: 75 AVSMIAFKLDEDLCAA-----------------PANGGNVSRPPVTLRLVIPASQCGSLI 117
Query: 156 GKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIM 215
GKAG IK +R T ++V T + V +SG +A+ + I A++
Sbjct: 118 GKAGTKIKEIRETTGAQVQVAGDLLPNST-------ERAVTVSGVPDAIILCVRQICAVI 170
Query: 216 YKFSPR-EDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVP 274
+ P+ IP ++ ++ S + G Y P A V
Sbjct: 171 LESPPKGATIPYHPSLSLG---TVLLSTNQGFSVQGQYGAVTP-------------AEVT 214
Query: 275 DLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIR 334
LQ +G+ P S S+V GL +Q+ L P + IG VIG+ G I IR
Sbjct: 215 KLQQL--SGHAVPFASP--SMVPGLDPGTQTSSQ--EFLVPNDLIGCVIGRQGSKISEIR 268
Query: 335 QASGAQIDVDDTKDNRDECVITVT 358
Q SGA I + + + E +T+T
Sbjct: 269 QMSGAHIKIGNQAEGAGERHVTIT 292
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 384 EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVV 443
E T+T+R+L+ K +G IIGK G + IR+++ A + IS+G P + + +
Sbjct: 13 ELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCP------ERITTIT 66
Query: 444 GEVGSVRDALVQIILRLRDD 463
G +V A+ I +L +D
Sbjct: 67 GSTAAVFHAVSMIAFKLDED 86
>gi|427785521|gb|JAA58212.1| Putative igf-ii mrna-binding protein imp [Rhipicephalus pulchellus]
Length = 657
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 114/434 (26%), Positives = 184/434 (42%), Gaps = 66/434 (15%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKEDVEV 98
RIL ++G++IG++G I I Q++RARV V G+ ++V+TIY + ++
Sbjct: 209 RILVLSDMVGAIIGRAGGTIRQITQQSRARVDVHRKENAGSLEKVITIYGNPEN------ 262
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
C+ A K+ + +N D K IL ++ IIGK+
Sbjct: 263 ----------CST--ACQKILEVMQQEASNTNRGDVPLK------ILAHNNLIGRIIGKS 304
Query: 159 GATIKRLRSKTRTSIKVTP-KDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYK 217
G TIKR+ +T T I V+ D S A+ + + I G+ E V +A +SA + +
Sbjct: 305 GNTIKRIMEQTDTKITVSSLHDGS------ALHLERVITIKGKPEGVCRAEQLVSAKLRQ 358
Query: 218 FSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQ 277
+ L AP S++ P GL+P A P AR P +
Sbjct: 359 SYESDLAAL------APQSLMFP---------GLHPMAMMSAYPPPPPPHGPPARPPHYR 403
Query: 278 GYADTGNTWPVYSTGLSLVSGLV----GASQS------EELVIRVLCPFNKIGRVIGKGG 327
G G + G + G V G S E ++ + P +G +IG GG
Sbjct: 404 GGGGGGPYPHPPAVGGGYMGGAVHGPMGGYMSPSHGGVERELVCLYIPNTAVGAIIGTGG 463
Query: 328 GTIKSIRQASGAQIDV-----DDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKIN 382
+I+ + SGA I V DD D + V V E +SM V N
Sbjct: 464 SSIRDMIMLSGASIKVAQPNKDDPADAHERKVTIVGTPECQWRAQSMIFNKVCYEGCMGN 523
Query: 383 DEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEV 442
D T+ + + V S +G IIGK G + E+++ T+A +++ ++ + A+ + V +
Sbjct: 524 --PDGTLRVEIFVPSNQVGRIIGKGGQTVRELQRLTRALIKLP--EESQNANTEETPVHI 579
Query: 443 VGEVGSVRDALVQI 456
+G+ S A QI
Sbjct: 580 LGDFFSTHAAQRQI 593
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 67/116 (57%), Gaps = 1/116 (0%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSM 369
+R+L + +G +IG+ GGTI+ I Q S A++DV K+N +T +P++ +
Sbjct: 208 LRILVLSDMVGAIIGRAGGTIRQITQQSRARVDVHR-KENAGSLEKVITIYGNPENCSTA 266
Query: 370 AVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRIS 425
+ + ++Q + ++ + V +++L + +IG IIGKSG+ I I ++T + +S
Sbjct: 267 CQKILEVMQQEASNTNRGDVPLKILAHNNLIGRIIGKSGNTIKRIMEQTDTKITVS 322
>gi|227497228|ref|NP_067542.3| poly(rC)-binding protein 4 [Mus musculus]
gi|14715061|gb|AAH10694.1| Poly(rC) binding protein 4 [Mus musculus]
Length = 403
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 93/336 (27%), Positives = 157/336 (46%), Gaps = 52/336 (15%)
Query: 301 GASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAI 360
G S L +R+L ++G +IGK G T+K IR+ S A+I + + + E + T+T
Sbjct: 11 GPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE--GSCPERITTITGS 68
Query: 361 ESPDDIKSMAVEAVLLLQTKINDED------------DDTVTIRLLVSSKVIGCIIGKSG 408
+ AV ++ K+ DED VT+RL++ + G +IGK+G
Sbjct: 69 ------TAAVFHAVSMIAFKL-DEDLCAAPANGGSVSRPPVTLRLVIPASQCGSLIGKAG 121
Query: 409 SIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDR 468
+ I EIR+ T A V+++ P ++ + V V G V DA++ + ++ L+
Sbjct: 122 TKIKEIRETTGAQVQVAGDLLP---NSTERAVTVSG----VPDAIILCVRQICAVILE-- 172
Query: 469 DGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGS 528
+PP GA Y +S+ +L L +Q G ++ + +
Sbjct: 173 ----SPPKGATIPYHPS--LSLGTVL--------LSANQGFSVQGQYGAVTPAEVTKLQQ 218
Query: 529 LSMGDSPYGSMSSYSSKLYGGLPPPL---TLEVLVPANAVGKVIGKAGSNLANIRKISGA 585
LS P+ S S + GL P + E LVP + +G VIG+ GS ++ IR++SGA
Sbjct: 219 LSGHAVPFASPS-----VVPGLDPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGA 273
Query: 586 TIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFI 621
I++ + G+R I+G+P A+ LI A +
Sbjct: 274 HIKIGNQAEGAGERHVTITGSPVSIALAQYLITACL 309
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 137/332 (41%), Gaps = 51/332 (15%)
Query: 30 EKGNEESVIY--RILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIY 87
E+G E S+ R+L +GS+IGK G+ + IR+++ AR+ + + +R+ TI
Sbjct: 9 EEGPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTIT 66
Query: 88 SHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVP 147
F E LCAA + + ++++P
Sbjct: 67 GSTAAVFHAVSMIAFKLDEDLCAA-----------------PANGGSVSRPPVTLRLVIP 109
Query: 148 SSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKA 207
+SQ ++IGKAG IK +R T ++V T + V +SG +A+
Sbjct: 110 ASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNST-------ERAVTVSGVPDAIILC 162
Query: 208 LFAISAIMYKFSPR-EDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPS 266
+ I A++ + P+ IP ++ ++ S + G Y P
Sbjct: 163 VRQICAVILESPPKGATIPYHPSLSLG---TVLLSANQGFSVQGQYGAVTP--------- 210
Query: 267 ILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKG 326
A V LQ +G+ P S S+V GL ++Q+ L P + IG VIG+
Sbjct: 211 ----AEVTKLQQL--SGHAVPFASP--SVVPGLDPSTQTSSQ--EFLVPNDLIGCVIGRQ 260
Query: 327 GGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
G I IRQ SGA I + + + E +T+T
Sbjct: 261 GSKISEIRQMSGAHIKIGNQAEGAGERHVTIT 292
>gi|238836388|gb|ACR61402.1| IGF-II mRNA-binding protein 2a variant C [Danio rerio]
Length = 453
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 161/330 (48%), Gaps = 31/330 (9%)
Query: 300 VGASQSE-ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
+G+ Q + + +R+L P +G +IGK G TIK+I + + +++D+ K+N +T
Sbjct: 35 LGSRQKQPDFPLRMLVPTQFVGAIIGKEGLTIKNITKQTQSKVDIHR-KENAGAAEKPIT 93
Query: 359 AIESPDDIKSMAVEAVLLLQTK--INDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
+P+ S A ++ + K ++ + + + +++L + ++G +IGK G + +I +
Sbjct: 94 IHSTPEGC-STACHMIMDIMQKEAVDTKVTEDIPLKILAHNSLVGRLIGKEGRNLKKIEE 152
Query: 417 RTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLR-----DDALKDRDGS 471
T+ + IS + ++ V G + + A V+I+ +LR D A ++ +
Sbjct: 153 DTETKITISSLQDLTIYNPERTII-VKGSIEACCRAEVEIMKKLREAYENDVAAINQQSN 211
Query: 472 RNP--PVGADHIYSSGTGISMPPLLP-SIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGS 528
P + A I+S+G + P P IPPV P GY+ S +G LYG
Sbjct: 212 LIPGLSLSALGIFSTGLSVLPPAAGPRGIPPVPPTGYNPFLGHSSQLG-----GLYGV-- 264
Query: 529 LSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIE 588
P +S ++ P + + +P AVG +IGK G ++ + + +GA+I+
Sbjct: 265 -----PPASGISHQHTQA----PEQEVVYLFIPTQAVGAIIGKKGQHIKQLARFAGASIK 315
Query: 589 MSDSKSSR-GDRVALISGTPEQKRAAENLI 617
++ ++S R+ +I+G PE + A+ I
Sbjct: 316 IAPAESPDVTQRMVIITGPPEAQFKAQGRI 345
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 106/469 (22%), Positives = 183/469 (39%), Gaps = 98/469 (20%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKEDVEV 98
R+L P +G++IGK G I +I ++T+++V + GA ++ +TI+S
Sbjct: 47 RMLVPTQFVGAIIGKEGLTIKNITKQTQSKVDIHRKENAGAAEKPITIHS---------- 96
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
E A ++ + A D K E +IL +S +IGK
Sbjct: 97 -----TPEGCSTACHMIMDIMQKEAV--------DTKVTEDIPLKILAHNSLVGRLIGKE 143
Query: 159 GATIKRLRSKTRTSIKVTP-KDAS--EPTHSCAMEFDNFVLISGESEAVKKALFAISAIM 215
G +K++ T T I ++ +D + P + ++ E E +KK A +
Sbjct: 144 GRNLKKIEEDTETKITISSLQDLTIYNPERTIIVKGSIEACCRAEVEIMKKLREAYENDV 203
Query: 216 YKFSPRED-IP---------LETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVP 265
+ + + IP T + PP+ P +P PP G +P L S
Sbjct: 204 AAINQQSNLIPGLSLSALGIFSTGLSVLPPAAG-PRGIPPVPPTGY----NPFLGHSS-- 256
Query: 266 SILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGK 325
+ G VP G + P E+ V+ + P +G +IGK
Sbjct: 257 QLGGLYGVPPASGISHQHTQAP------------------EQEVVYLFIPTQAVGAIIGK 298
Query: 326 GGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAV-----EAVLLLQTK 380
G IK + + +GA I + ESPD + M + EA Q +
Sbjct: 299 KGQHIKQLARFAGASIKI--------------APAESPDVTQRMVIITGPPEAQFKAQGR 344
Query: 381 I----------NDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKP 430
I +++ + + V S G +IGK G +NE++ T A+V + + P
Sbjct: 345 IFGKLKEENFFTAKEEVKLETHIKVPSSAAGRVIGKGGKTVNELQNLTSAEVIVPRDQTP 404
Query: 431 KCADANDE-LVEVVGEVGSVRDA---LVQIILRLRDDALKDRDGSRNPP 475
D NDE V++ G + + A + +II +++ K + G+ P
Sbjct: 405 ---DENDEVFVKISGHFFASQTAQRKIREIIQQVKQQEQKHQQGAPTTP 450
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 80/200 (40%), Gaps = 30/200 (15%)
Query: 25 INEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDP-FPGAKDRV 83
I+ + + E+ V+Y + P +G++IGK G+ I + + A +K+ P R+
Sbjct: 270 ISHQHTQAPEQEVVY-LFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAESPDVTQRM 328
Query: 84 VTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQ 143
V I +A K I + K + K E
Sbjct: 329 VII----------------------TGPPEAQFKAQGRIFGKLKEENFFTAKEEVKLETH 366
Query: 144 ILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEA 203
I VPSS + +IGK G T+ L++ T + + P+D + + + FV ISG A
Sbjct: 367 IKVPSSAAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPDEND-----EVFVKISGHFFA 420
Query: 204 VKKALFAISAIMYKFSPRED 223
+ A I I+ + +E
Sbjct: 421 SQTAQRKIREIIQQVKQQEQ 440
>gi|17530887|ref|NP_511111.1| IGF-II mRNA-binding protein, isoform A [Drosophila melanogaster]
gi|24641108|ref|NP_727456.1| IGF-II mRNA-binding protein, isoform B [Drosophila melanogaster]
gi|24641110|ref|NP_727457.1| IGF-II mRNA-binding protein, isoform C [Drosophila melanogaster]
gi|7533029|gb|AAF63331.1|AF241237_1 IGF-II mRNA-binding protein [Drosophila melanogaster]
gi|17862978|gb|AAL39966.1| SD07045p [Drosophila melanogaster]
gi|22832057|gb|AAF47958.2| IGF-II mRNA-binding protein, isoform A [Drosophila melanogaster]
gi|22832058|gb|AAN09274.1| IGF-II mRNA-binding protein, isoform B [Drosophila melanogaster]
gi|22832059|gb|AAN09275.1| IGF-II mRNA-binding protein, isoform C [Drosophila melanogaster]
gi|220947510|gb|ACL86298.1| Imp-PA [synthetic construct]
gi|220956906|gb|ACL90996.1| Imp-PA [synthetic construct]
Length = 566
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 152/333 (45%), Gaps = 49/333 (14%)
Query: 298 GLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITV 357
G+ G + + +R+L +G +IG+ G TI++I Q S A++DV K+N ++
Sbjct: 68 GMPGPGRQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHR-KENVGSLEKSI 126
Query: 358 TAIESPDDIKSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKR 417
T +P++ + + ++Q + + + +++L + +IG IIGKSG+ I I +
Sbjct: 127 TIYGNPENCTNACKRILEVMQQEAISTNKGEICLKILAHNNLIGRIIGKSGNTIKRIMQD 186
Query: 418 TKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVG 477
T + +S + + + ++ V G + ++ A QI +LR D
Sbjct: 187 TDTKITVSSINDINSFNL-ERIITVKGLIENMSRAENQISTKLRQSYENDLQ-------- 237
Query: 478 ADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYG 537
+M P P + P+ S G GM+ ++S+ P+
Sbjct: 238 -----------AMAPQSLMFPGLHPMAM----MSTPGNGMVFNTSM-----------PFP 271
Query: 538 SMSSYS-SKLYGGLPPPL-------TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEM 589
S S++ SK + PP+ T + +P NAVG +IG GS++ +I + S A++++
Sbjct: 272 SCQSFAMSKTPASVVPPVFPNDLQETTYLYIPNNAVGAIIGTRGSHIRSIMRFSNASLKI 331
Query: 590 SDSKS-----SRGDRVALISGTPEQKRAAENLI 617
+ + + +R I GTPE + A+ +I
Sbjct: 332 APLDADKPLDQQTERKVTIVGTPEGQWKAQYMI 364
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 105/455 (23%), Positives = 197/455 (43%), Gaps = 75/455 (16%)
Query: 12 RDNDRDGKNQKRRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVK 71
++ R +NQ+ G + RIL ++G++IG+ G I +I Q++RARV
Sbjct: 53 KNQRRSQRNQRNPYPGMPGPGRQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVD 112
Query: 72 VV-DPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANAT 130
V G+ ++ +TIY + ++ + C +++ A N
Sbjct: 113 VHRKENVGSLEKSITIYGNPENCTNA------------CKRILEVMQQEAISTN------ 154
Query: 131 DNDKKRKEKEEC-QILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAM 189
+ E C +IL ++ IIGK+G TIKR+ T T I V+ + +
Sbjct: 155 -------KGEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITVSSINDIN-----SF 202
Query: 190 EFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPG 249
+ + + G E + +A IS + + S D+ AP S++ P ++P
Sbjct: 203 NLERIITVKGLIENMSRAENQISTKLRQ-SYENDLQAM-----APQSLMFPG---LHPMA 253
Query: 250 GLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELV 309
+ + ++ + S+P P Q +A + T S+V + E
Sbjct: 254 MMSTPGNGMVFNTSMP-------FPSCQSFA-------MSKTPASVVPPVFPNDLQETTY 299
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQI-----DVDDTKDNRDECVITVTAIESPD 364
+ + P N +G +IG G I+SI + S A + D D D + E +T+ + +P+
Sbjct: 300 LYI--PNNAVGAIIGTRGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTI--VGTPE 355
Query: 365 DIKSMAVEAVLLLQTKINDE------DDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRT 418
+A ++ K+ +E DD +T+ LLV+S +G IIGK G + E+++ T
Sbjct: 356 G----QWKAQYMIFEKMREEGFMCGTDDVRLTVELLVASSQVGRIIGKGGQNVRELQRVT 411
Query: 419 KADVRISKGDKPKCADANDEL-VEVVGEVGSVRDA 452
+ +++ + + ++E V ++G SV+ A
Sbjct: 412 GSVIKLPEHALAPPSGGDEETPVHIIGLFYSVQSA 446
Score = 38.9 bits (89), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 30/38 (78%)
Query: 554 LTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSD 591
LT+E+LV ++ VG++IGK G N+ +++++G+ I++ +
Sbjct: 382 LTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIKLPE 419
>gi|356556240|ref|XP_003546434.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 442
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 98/194 (50%), Gaps = 17/194 (8%)
Query: 27 EKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTI 86
EK G ++R++ P G +GS+IG+ G++I + +ETR+R++V+D G DR+V
Sbjct: 42 EKRWPGWPGDCVFRLIVPVGKVGSIIGRKGELIKKMCEETRSRIRVLDAPLGTPDRIVL- 100
Query: 87 YSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQI-- 144
V KE+ E L A DA++++ ++ +N + C I
Sbjct: 101 ---VSGKEEPEA--------ALSPAMDAVVRIFKRVSGLSETDAENKESAAGLAFCSIRL 149
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAV 204
LV S+Q+ N+IGK G+ IK ++ T S++V D S A + V I GE+ V
Sbjct: 150 LVASTQAINLIGKQGSLIKSIQENTSASVRVLSGDE---VQSYATVDERIVEIQGEALKV 206
Query: 205 KKALFAISAIMYKF 218
KAL A+ + KF
Sbjct: 207 LKALEAVVGHLRKF 220
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 158/341 (46%), Gaps = 36/341 (10%)
Query: 309 VIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKS 368
V R++ P K+G +IG+ G IK + + + ++I V D + ++ V+ E P+ S
Sbjct: 53 VFRLIVPVGKVGSIIGRKGELIKKMCEETRSRIRVLDAPLGTPDRIVLVSGKEEPEAALS 112
Query: 369 MAVEAVLLLQTKI------NDEDDDTV------TIRLLVSSKVIGCIIGKSGSIINEIRK 416
A++AV+ + ++ + E+ ++ +IRLLV+S +IGK GS+I I++
Sbjct: 113 PAMDAVVRIFKRVSGLSETDAENKESAAGLAFCSIRLLVASTQAINLIGKQGSLIKSIQE 172
Query: 417 RTKADVRISKGDKPKC-ADANDELVEVVGEVGSVRDALVQIILRLR-----DDALKDRDG 470
T A VR+ GD+ + A ++ +VE+ GE V AL ++ LR L +
Sbjct: 173 NTSASVRVLSGDEVQSYATVDERIVEIQGEALKVLKALEAVVGHLRKFLVDHSVLPLFEK 232
Query: 471 SRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQR-----ADSGSGI-GMLSSSSLY 524
+ N D + + S+ + Y + AD S + L SS++
Sbjct: 233 TYNASTSQDRQAETWSDKSLLHTTSRTSIFADIPYSTKRDSVLADRESQLDSFLPSSTMS 292
Query: 525 GYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVL----VPANAVGKVIGKAGSNLANIR 580
YG S S+S S G + P+ V+ +P + +IG G+N+ IR
Sbjct: 293 LYGQDS-------SLSGVRSSALGRVGAPIVTTVIQTMQIPLSYAEDIIGIQGTNIEYIR 345
Query: 581 KISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFI 621
+ SGA + + +S+ + V I GT + + A+ LIQ I
Sbjct: 346 RTSGAILTVQESRVP-DEIVVEIKGTSSEVQTAQQLIQDVI 385
>gi|300798415|ref|NP_001178812.1| poly(rC)-binding protein 4 [Rattus norvegicus]
Length = 403
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 155/329 (47%), Gaps = 52/329 (15%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
L +R+L ++G +IGK G T+K IR+ S A+I + + + E + T+T
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE--GSCPERITTITGS------T 69
Query: 368 SMAVEAVLLLQTKINDED------------DDTVTIRLLVSSKVIGCIIGKSGSIINEIR 415
+ AV ++ K+ DED VT+RL++ + G +IGK+G+ I EIR
Sbjct: 70 AAVFHAVSMIAFKL-DEDLCAAPANGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIR 128
Query: 416 KRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPP 475
+ T A V+++ P ++ + V V G V DA++ + ++ L+ +PP
Sbjct: 129 ETTGAQVQVAGDLLP---NSTERAVTVSG----VPDAIILCVRQICAVILE------SPP 175
Query: 476 VGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSP 535
GA Y +S+ +L L +Q G ++ + + LS P
Sbjct: 176 KGATIPYHPS--LSLGTVL--------LSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVP 225
Query: 536 YGSMSSYSSKLYGGLPPPL---TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDS 592
+ S S + GL P + E LVP + +G VIG+ GS ++ IR++SGA I++ +
Sbjct: 226 FASPS-----VVPGLDPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQ 280
Query: 593 KSSRGDRVALISGTPEQKRAAENLIQAFI 621
G+R I+G+P A+ LI A +
Sbjct: 281 AEGAGERHVTITGSPVSIALAQYLITACL 309
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 133/324 (41%), Gaps = 49/324 (15%)
Query: 36 SVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKED 95
++ R+L +GS+IGK G+ + IR+++ AR+ + + +R+ TI
Sbjct: 17 TLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGSTAAVFH 74
Query: 96 VEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANII 155
F E LCAA + + ++++P+SQ ++I
Sbjct: 75 AVSMIAFKLDEDLCAA-----------------PANGGSVSRPPVTLRLVIPASQCGSLI 117
Query: 156 GKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIM 215
GKAG IK +R T ++V T + V +SG +A+ + I A++
Sbjct: 118 GKAGTKIKEIRETTGAQVQVAGDLLPNST-------ERAVTVSGVPDAIILCVRQICAVI 170
Query: 216 YKFSPR-EDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVP 274
+ P+ IP ++ ++ S + G Y P A V
Sbjct: 171 LESPPKGATIPYHPSLSLG---TVLLSANQGFSVQGQYGAVTP-------------AEVT 214
Query: 275 DLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIR 334
LQ +G+ P S S+V GL ++Q+ L P + IG VIG+ G I IR
Sbjct: 215 KLQQL--SGHAVPFASP--SVVPGLDPSTQTSSQ--EFLVPNDLIGCVIGRQGSKISEIR 268
Query: 335 QASGAQIDVDDTKDNRDECVITVT 358
Q SGA I + + + E +T+T
Sbjct: 269 QMSGAHIKIGNQAEGAGERHVTIT 292
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 384 EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVV 443
E T+T+R+L+ K +G IIGK G + IR+++ A + IS+G P + + +
Sbjct: 13 ELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCP------ERITTIT 66
Query: 444 GEVGSVRDALVQIILRLRDD 463
G +V A+ I +L +D
Sbjct: 67 GSTAAVFHAVSMIAFKLDED 86
>gi|255574127|ref|XP_002527979.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223532605|gb|EEF34391.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 416
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 96/184 (52%), Gaps = 18/184 (9%)
Query: 38 IYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVE 97
+YR++ P +GS+IG+ G++I + ETRAR++++D P DR+V I KE+ E
Sbjct: 28 VYRLIVPVAKVGSIIGRKGELIKKMCVETRARIRILDGPPSISDRIVLI----SGKEEPE 83
Query: 98 VDDEFNDKEPLCAAQDALLKVH---AAIANAVANATDNDKKRKEKEECQILVPSSQSANI 154
L A DA+L+V + ++ A+A + ++LV SSQ+ N+
Sbjct: 84 A--------ALSPAMDAVLRVFKRVSGLSAGEADAMGSAVAGAAFSSVKLLVASSQAINL 135
Query: 155 IGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAI 214
IGK G+TIK ++ T +++V A E S A + V I GE+ V KAL +
Sbjct: 136 IGKQGSTIKSIQESTAATVRVL---AEEEAPSYATSDERIVEIHGEASKVLKALEGVIGQ 192
Query: 215 MYKF 218
+ KF
Sbjct: 193 LRKF 196
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 96/358 (26%), Positives = 162/358 (45%), Gaps = 59/358 (16%)
Query: 309 VIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKS 368
V R++ P K+G +IG+ G IK + + A+I + D + + ++ ++ E P+ S
Sbjct: 28 VYRLIVPVAKVGSIIGRKGELIKKMCVETRARIRILDGPPSISDRIVLISGKEEPEAALS 87
Query: 369 MAVEAVLLLQTKIN-------DEDDDTV------TIRLLVSSKVIGCIIGKSGSIINEIR 415
A++AVL + +++ D V +++LLV+S +IGK GS I I+
Sbjct: 88 PAMDAVLRVFKRVSGLSAGEADAMGSAVAGAAFSSVKLLVASSQAINLIGKQGSTIKSIQ 147
Query: 416 KRTKADVRI-SKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDR-----D 469
+ T A VR+ ++ + P A +++ +VE+ GE V AL +I +LR + +
Sbjct: 148 ESTAATVRVLAEEEAPSYATSDERIVEIHGEASKVLKALEGVIGQLRKFLVDHTVVPIFE 207
Query: 470 GSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSL 529
+ N + D + + P SIP + L + +G+ S SL SL
Sbjct: 208 KTHNAIISQDRSADARADKTQP----SIPSLTAL----HSAPAPQVGIGSEYSL----SL 255
Query: 530 SMGDSPYGSMSSYSSKL-------------YGGLPPP------------LTLEVLVPANA 564
S Y S K+ GGL P +T + VP +
Sbjct: 256 KRDPSIYDRESHLDQKIPQSGLLLFGQDSSLGGLRPTGLGRAAAPIVTQMTQTMQVPLSY 315
Query: 565 VGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVAL-ISGTPEQKRAAENLIQAFI 621
+IG GSN+A IR+ SGA + + +S++ D + + I GT Q + A+ LIQ FI
Sbjct: 316 AEDIIGVGGSNIAYIRRTSGAILTIQESRTP--DEITVEIKGTASQVQMAQQLIQEFI 371
>gi|354476373|ref|XP_003500399.1| PREDICTED: poly(rC)-binding protein 4 [Cricetulus griseus]
gi|344252773|gb|EGW08877.1| Poly(rC)-binding protein 4 [Cricetulus griseus]
Length = 403
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 155/329 (47%), Gaps = 52/329 (15%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
L +R+L ++G +IGK G T+K IR+ S A+I + + + E + T+T
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE--GSCPERITTITGS------T 69
Query: 368 SMAVEAVLLLQTKINDED------------DDTVTIRLLVSSKVIGCIIGKSGSIINEIR 415
+ AV ++ K+ DED VT+RL++ + G +IGK+G+ I EIR
Sbjct: 70 AAVFHAVSMIAFKL-DEDLCAAPANGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIR 128
Query: 416 KRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPP 475
+ T A V+++ P ++ + V V G V DA++ + ++ L+ +PP
Sbjct: 129 ETTGAQVQVAGDLLP---NSTERAVTVSG----VPDAIILCVRQICAVILE------SPP 175
Query: 476 VGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSP 535
GA Y +S+ +L L +Q G ++ + + LS P
Sbjct: 176 KGATIPYHPS--LSLGTVL--------LSTNQGFSVQGQYGAVAPAEVTKLQQLSGHAVP 225
Query: 536 YGSMSSYSSKLYGGLPPPL---TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDS 592
+ S S + GL P + E LVP + +G VIG+ GS ++ IR++SGA I++ +
Sbjct: 226 FASPS-----VVPGLDPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQ 280
Query: 593 KSSRGDRVALISGTPEQKRAAENLIQAFI 621
G+R I+G+P A+ LI A +
Sbjct: 281 AEGAGERHVTITGSPVSIALAQYLITACL 309
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 133/324 (41%), Gaps = 49/324 (15%)
Query: 36 SVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKED 95
++ R+L +GS+IGK G+ + IR+++ AR+ + + +R+ TI
Sbjct: 17 TLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGSTAAVFH 74
Query: 96 VEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANII 155
F E LCAA + + ++++P+SQ ++I
Sbjct: 75 AVSMIAFKLDEDLCAA-----------------PANGGSVSRPPVTLRLVIPASQCGSLI 117
Query: 156 GKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIM 215
GKAG IK +R T ++V T + V +SG +A+ + I A++
Sbjct: 118 GKAGTKIKEIRETTGAQVQVAGDLLPNST-------ERAVTVSGVPDAIILCVRQICAVI 170
Query: 216 YKFSPR-EDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVP 274
+ P+ IP ++ ++ S + G Y P A V
Sbjct: 171 LESPPKGATIPYHPSLSLG---TVLLSTNQGFSVQGQYGAVAP-------------AEVT 214
Query: 275 DLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIR 334
LQ +G+ P S S+V GL ++Q+ L P + IG VIG+ G I IR
Sbjct: 215 KLQQL--SGHAVPFASP--SVVPGLDPSTQTSSQ--EFLVPNDLIGCVIGRQGSKISEIR 268
Query: 335 QASGAQIDVDDTKDNRDECVITVT 358
Q SGA I + + + E +T+T
Sbjct: 269 QMSGAHIKIGNQAEGAGERHVTIT 292
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 384 EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVV 443
E T+T+R+L+ K +G IIGK G + IR+++ A + IS+G P + + +
Sbjct: 13 ELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCP------ERITTIT 66
Query: 444 GEVGSVRDALVQIILRLRDD 463
G +V A+ I +L +D
Sbjct: 67 GSTAAVFHAVSMIAFKLDED 86
>gi|147841628|emb|CAN73066.1| hypothetical protein VITISV_020074 [Vitis vinifera]
Length = 505
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 50/69 (72%), Gaps = 2/69 (2%)
Query: 267 ILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKG 326
L A VP QGY D G+TWPVYS+ L +VSG GAS+SEEL+IRV PF+KIG +G+G
Sbjct: 379 FLAAIHVPTFQGYLDMGSTWPVYSSNLPMVSGH-GASRSEELIIRVFHPFDKIG-CVGRG 436
Query: 327 GGTIKSIRQ 335
G +IK RQ
Sbjct: 437 GSSIKIFRQ 445
>gi|410982764|ref|XP_003997718.1| PREDICTED: RNA-binding protein Nova-2 [Felis catus]
Length = 372
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 151/338 (44%), Gaps = 51/338 (15%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD-----NRDECVITVTAIE 361
E ++VL P G +IGKGG TI +++ +GA I + +KD C++ TA E
Sbjct: 40 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTA-E 98
Query: 362 SPDDIKSMAVEAVL-------------LLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSG 408
+ + + S E V +LQ + D +L+V + G IIGK G
Sbjct: 99 ALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGG 158
Query: 409 SIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDD----- 463
+ + + +++ A V++S+ KP+ + + +V V GE V A+ I+ ++++D
Sbjct: 159 ATVKAVMEQSGAWVQLSQ--KPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSS 216
Query: 464 ALKDRDGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSL 523
L + PV S P P P L A + + G+L + L
Sbjct: 217 CLNISYANVAGPVAN----------SNPTGSPYASPADVLPAAAAASAAAASGLLGPAGL 266
Query: 524 YGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKIS 583
G G+ P S + + +L +E+ VP N VG ++GK G L ++++
Sbjct: 267 AGVGAFPAA-LPAFSGTDLAKEL---------VEIAVPENLVGAILGKGGKTLVEYQELT 316
Query: 584 GATIEMSDS----KSSRGDRVALISGTPEQKRAAENLI 617
GA I++S +R RV I+G+P +AA+ LI
Sbjct: 317 GARIQISKKGEFLPGTRNRRVT-ITGSPAATQAAQYLI 353
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 144/318 (45%), Gaps = 31/318 (9%)
Query: 29 DEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV---DPFPGAKDRVVT 85
D G E ++L P GS+IGK G+ I +++ET A +K+ D +PG +RV
Sbjct: 33 DRDGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCL 92
Query: 86 IYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQIL 145
+ E + F E + A+ K + N + T + R ++ +++
Sbjct: 93 VQGTA---EALNAVHSF-IAEKVREIPQAMTKPE--VVNILQPQTTMNPDR--AKQAKLI 144
Query: 146 VPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVK 205
VP+S + IIGK GAT+K + ++ ++++ K + V +SGE E V
Sbjct: 145 VPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQ------ERVVTVSGEPEQVH 198
Query: 206 KALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVP 265
K A+SAI+ K +ED P ++ + + P G Y + +LP+ +
Sbjct: 199 K---AVSAIVQKV--QED-PQSSSCLNISYANVAGPVANSNPTGSPYASPADVLPAAAAA 252
Query: 266 SILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGK 325
S A+ + G A G +P S G ++ELV + P N +G ++GK
Sbjct: 253 SAAAASGLLGPAGLAGVG-AFPAALPAFS------GTDLAKELV-EIAVPENLVGAILGK 304
Query: 326 GGGTIKSIRQASGAQIDV 343
GG T+ ++ +GA+I +
Sbjct: 305 GGKTLVEYQELTGARIQI 322
>gi|410951299|ref|XP_003982335.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Felis catus]
Length = 403
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 155/329 (47%), Gaps = 52/329 (15%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
L +R+L ++G +IGK G T+K IR+ S A+I + + + E + T+T
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE--GSCPERITTITGS------T 69
Query: 368 SMAVEAVLLLQTKINDED------------DDTVTIRLLVSSKVIGCIIGKSGSIINEIR 415
+ AV ++ K+ DED VT+RL++ + G +IGK+G+ I EIR
Sbjct: 70 AAVFHAVSMIAFKL-DEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIR 128
Query: 416 KRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPP 475
+ T A V+++ P ++ + V V G V DA++ + ++ L+ +PP
Sbjct: 129 ETTGAQVQVAGDLLP---NSTERAVTVSG----VPDAIILCVRQICAVILE------SPP 175
Query: 476 VGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSP 535
GA Y +S+ +L L +Q G ++ + + LS P
Sbjct: 176 KGATIPYHPS--LSLGTVL--------LSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVP 225
Query: 536 YGSMSSYSSKLYGGLPPPL---TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDS 592
+ S S + GL P + E LVP + +G VIG+ GS ++ IR++SGA I++ +
Sbjct: 226 FASPS-----MVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQ 280
Query: 593 KSSRGDRVALISGTPEQKRAAENLIQAFI 621
G+R I+G+P A+ LI A +
Sbjct: 281 AEGAGERHVTITGSPVSIALAQYLITACL 309
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 132/324 (40%), Gaps = 49/324 (15%)
Query: 36 SVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKED 95
++ R+L +GS+IGK G+ + IR+++ AR+ + + +R+ TI
Sbjct: 17 TLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGSTAAVFH 74
Query: 96 VEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANII 155
F E LCAA + + ++++P+SQ ++I
Sbjct: 75 AVSMIAFKLDEDLCAA-----------------PANGGNVSRPPVTLRLVIPASQCGSLI 117
Query: 156 GKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIM 215
GKAG IK +R T ++V T + V +SG +A+ + I A++
Sbjct: 118 GKAGTKIKEIRETTGAQVQVAGDLLPNST-------ERAVTVSGVPDAIILCVRQICAVI 170
Query: 216 YKFSPR-EDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVP 274
+ P+ IP ++ ++ S + G Y P A V
Sbjct: 171 LESPPKGATIPYHPSLSLG---TVLLSANQGFSVQGQYGAVTP-------------AEVT 214
Query: 275 DLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIR 334
LQ +G+ P S S+V GL +Q+ L P + IG VIG+ G I IR
Sbjct: 215 KLQQL--SGHAVPFASP--SMVPGLDPGTQTSSQ--EFLVPNDLIGCVIGRQGSKISEIR 268
Query: 335 QASGAQIDVDDTKDNRDECVITVT 358
Q SGA I + + + E +T+T
Sbjct: 269 QMSGAHIKIGNQAEGAGERHVTIT 292
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 384 EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVV 443
E T+T+R+L+ K +G IIGK G + IR+++ A + IS+G P + + +
Sbjct: 13 ELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCP------ERITTIT 66
Query: 444 GEVGSVRDALVQIILRLRDD 463
G +V A+ I +L +D
Sbjct: 67 GSTAAVFHAVSMIAFKLDED 86
>gi|71895775|ref|NP_001025686.1| neuro-oncological ventral antigen 2 [Xenopus (Silurana) tropicalis]
gi|62205009|gb|AAH93475.1| neuro-oncological ventral antigen 2 [Xenopus (Silurana) tropicalis]
Length = 413
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 108/389 (27%), Positives = 165/389 (42%), Gaps = 95/389 (24%)
Query: 302 ASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD-----NRDECVIT 356
A + EL ++VL P G +IGKGG TI +++ +GA I + +KD C++
Sbjct: 28 AGEDGELFLKVLIPSYAAGSIIGKGGQTIVQLQRETGATIKLSKSKDFYPGTTERVCLVQ 87
Query: 357 VTAIESPDDIKSMAVEAV-------------LLL--QTKINDEDDDTVTIRLLVSSKVIG 401
+A ES + + E V +LL QT IN E +L+V + G
Sbjct: 88 GSA-ESLLSVHNFIAEKVREVPQGGTKNDLGVLLPPQTTINAERAKQA--KLIVPNTTAG 144
Query: 402 CIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLR 461
IIGK G+ + I + + A V++S+ KP + ++ +V V GE V+ A+ II + R
Sbjct: 145 LIIGKGGATVRSIMEESGAWVQLSQ--KPAGPNLHERVVTVSGEPSQVQKAIRSIIHKSR 202
Query: 462 DDALKDRDGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPL------------------ 503
+D PP G H+ S T S P+ S P P
Sbjct: 203 ED----------PPQGTTHLNISYTN-SQGPVANSNPTGSPYAGGSAEQVLTPFQPAPPA 251
Query: 504 -----GYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPY-GSMSSYSSKL---YGGLPPPL 554
G D A S + L++ + YGY S MG +P G + + L Y G P
Sbjct: 252 PPAITGGDLLAISAA----LNTLASYGY-STGMGFNPLVGGVHPAAVNLLASYTGEAGPA 306
Query: 555 ----------------------TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDS 592
TLE+ VP VG ++GK G L ++++GA I++S
Sbjct: 307 LGLGGGGILLEKMGAESVTGKETLEMAVPETLVGAILGKGGKTLVEYQELTGARIQISKK 366
Query: 593 K----SSRGDRVALISGTPEQKRAAENLI 617
+R +V I+G P +AA+ LI
Sbjct: 367 GEFVPGTRSRKVT-ITGPPGATQAAQYLI 394
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 94/383 (24%), Positives = 159/383 (41%), Gaps = 102/383 (26%)
Query: 23 RRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV---DPFPGA 79
+R N E G + ++L P GS+IGK G+ I +++ET A +K+ D +PG
Sbjct: 23 KRSNTAGEDGE---LFLKVLIPSYAAGSIIGKGGQTIVQLQRETGATIKLSKSKDFYPGT 79
Query: 80 KDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAV----ANATDNDK- 134
+RV + + ++LL VH IA V T ND
Sbjct: 80 TERVCLVQ----------------------GSAESLLSVHNFIAEKVREVPQGGTKNDLG 117
Query: 135 ---------KRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTH 185
+ ++ +++VP++ + IIGK GAT++ + ++ ++++ K A H
Sbjct: 118 VLLPPQTTINAERAKQAKLIVPNTTAGLIIGKGGATVRSIMEESGAWVQLSQKPAGPNLH 177
Query: 186 SCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLET-------TVREAPPSII 238
+ V +SGE V+KA I +I++K RED P T T + P +
Sbjct: 178 ------ERVVTVSGEPSQVQKA---IRSIIHK--SREDPPQGTTHLNISYTNSQGPVANS 226
Query: 239 IPSDVPIYPPGGLYPNADPIL-PSRSVPSILGAARVPDLQGYADTGNTWPVY--STGLS- 294
P+ P Y G +A+ +L P + P A DL + NT Y STG+
Sbjct: 227 NPTGSP-YAGG----SAEQVLTPFQPAPPAPPAITGGDLLAISAALNTLASYGYSTGMGF 281
Query: 295 --LVSGL------------------------------VGA-SQSEELVIRVLCPFNKIGR 321
LV G+ +GA S + + + + P +G
Sbjct: 282 NPLVGGVHPAAVNLLASYTGEAGPALGLGGGGILLEKMGAESVTGKETLEMAVPETLVGA 341
Query: 322 VIGKGGGTIKSIRQASGAQIDVD 344
++GKGG T+ ++ +GA+I +
Sbjct: 342 ILGKGGKTLVEYQELTGARIQIS 364
>gi|345309017|ref|XP_001516066.2| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Ornithorhynchus anatinus]
Length = 679
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 153/327 (46%), Gaps = 49/327 (14%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSM 369
+R+L P +G +IGK G TIK++ + + +++D+ K+N +T +P+ S
Sbjct: 274 LRILVPTQFVGAIIGKEGLTIKNLTKQTQSKVDIHR-KENAGAAEKPITIHATPEG-SSE 331
Query: 370 AVEAVLLLQTKINDEDD--DTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKG 427
A +L + K DE + + +++L + ++G +IGK G + +I + T + IS
Sbjct: 332 ACRLILEIMQKEADETKSAEEIPLKILAHNSLVGRLIGKEGRNLKKIEQDTGTKITISPL 391
Query: 428 DKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKD-----RDGSRNPPVGADHIY 482
+ + + V G + + +A V+I+ +LR+ D + + P + +
Sbjct: 392 QDLTIYNP-ERTITVKGSIEACSNAEVEIMKKLREAYENDVVAVNQQANLIPGLNLSALG 450
Query: 483 SSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSY 542
TG+SM LPS GP G +++S Y +P+ S S Y
Sbjct: 451 IFSTGLSM---LPST--AGPHG-------------ATAASPY---------NPFASHSPY 483
Query: 543 SSKLYGG-----------LPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSD 591
S LYG +P + + +P AVG +IGK G ++ + + +GA+I+++
Sbjct: 484 LSGLYGASRVGAFPHQHSVPEQEVVNLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAP 543
Query: 592 SKS-SRGDRVALISGTPEQKRAAENLI 617
++ +R+ +I+G PE + A+ I
Sbjct: 544 AEGPDASERMVIITGPPEAQFKAQGRI 570
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 99/436 (22%), Positives = 184/436 (42%), Gaps = 76/436 (17%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVK-DKEDVE 97
RIL P +G++IGK G I ++ ++T+++V + GA ++ +TI++ + E
Sbjct: 275 RILVPTQFVGAIIGKEGLTIKNLTKQTQSKVDIHRKENAGAAEKPITIHATPEGSSEACR 334
Query: 98 VDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGK 157
+ E KE ++ K E+ +IL +S +IGK
Sbjct: 335 LILEIMQKE------------------------ADETKSAEEIPLKILAHNSLVGRLIGK 370
Query: 158 AGATIKRLRSKTRTSIKVTP-KDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMY 216
G +K++ T T I ++P +D + + + + G EA A I M
Sbjct: 371 EGRNLKKIEQDTGTKITISPLQDLT------IYNPERTITVKGSIEACSNAEVEI---MK 421
Query: 217 KFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDL 276
K RE + ++I ++ G++ +LPS + P AA
Sbjct: 422 KL--REAYENDVVAVNQQANLIPGLNLSAL---GIFSTGLSMLPSTAGPHGATAA----- 471
Query: 277 QGYADTGNTWPVYSTGLSLVSGLVGASQ----------SEELVIRVLCPFNKIGRVIGKG 326
+ + +++ +SGL GAS+ E+ V+ + P +G +IGK
Sbjct: 472 -------SPYNPFASHSPYLSGLYGASRVGAFPHQHSVPEQEVVNLFIPTQAVGAIIGKK 524
Query: 327 GGTIKSIRQASGAQIDVDDTK--DNRDECVITVTAIESPDDIKSMA---VEAVLLLQTKI 381
G IK + + +GA I + + D + VI I P + + A + L +
Sbjct: 525 GQHIKQLARFAGASIKIAPAEGPDASERMVI----ITGPPEAQFKAQGRIFGKLKEENFF 580
Query: 382 NDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDE-LV 440
N +++ + + V S G +IGK G +NE++ T A+V + + P D N+E +V
Sbjct: 581 NPKEEVKLEAHIKVPSSAAGRVIGKGGKTVNELQNLTSAEVIVPRDQTP---DENEEVIV 637
Query: 441 EVVGEVGSVRDALVQI 456
+++G + + A +I
Sbjct: 638 KIIGHFFASQTAQRKI 653
Score = 43.1 bits (100), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 60/148 (40%), Gaps = 24/148 (16%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPF-PGAKDRVVTIYSHVKDK 93
E + + P +G++IGK G+ I + + A +K+ P A +R+V I
Sbjct: 504 EQEVVNLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAEGPDASERMVII------- 556
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
+A K I + + K + K E I VPSS +
Sbjct: 557 ---------------TGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIKVPSSAAGR 601
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+IGK G T+ L++ T + + P+D +
Sbjct: 602 VIGKGGKTVNELQNLTSAEV-IVPRDQT 628
>gi|238836390|gb|ACR61403.1| IGF-II mRNA-binding protein 2a variant D [Danio rerio]
Length = 388
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 161/330 (48%), Gaps = 31/330 (9%)
Query: 300 VGASQSE-ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
+G+ Q + + +R+L P +G +IGK G TIK+I + + +++D+ K+N +T
Sbjct: 35 LGSRQKQPDFPLRMLVPTQFVGAIIGKEGLTIKNITKQTQSKVDIHR-KENAGAAEKPIT 93
Query: 359 AIESPDDIKSMAVEAVLLLQTK--INDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
+P+ S A ++ + K ++ + + + +++L + ++G +IGK G + +I +
Sbjct: 94 IHSTPEGC-STACHMIMDIMQKEAVDTKVTEDIPLKILAHNSLVGRLIGKEGRNLKKIEE 152
Query: 417 RTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLR-----DDALKDRDGS 471
T+ + IS + ++ V G + + A V+I+ +LR D A ++ +
Sbjct: 153 DTETKITISSLQDLTIYNPERTII-VKGSIEACCRAEVEIMKKLREAYENDVAAINQQSN 211
Query: 472 RNP--PVGADHIYSSGTGISMPPLLP-SIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGS 528
P + A I+S+G + P P IPPV P GY+ S +G LYG
Sbjct: 212 LIPGLSLSALGIFSTGLSVLPPAAGPRGIPPVPPTGYNPFLGHSSQLG-----GLYGV-- 264
Query: 529 LSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIE 588
P +S ++ P + + +P AVG +IGK G ++ + + +GA+I+
Sbjct: 265 -----PPASGISHQHTQA----PEQEVVYLFIPTQAVGAIIGKKGQHIKQLARFAGASIK 315
Query: 589 MSDSKSSR-GDRVALISGTPEQKRAAENLI 617
++ ++S R+ +I+G PE + A+ I
Sbjct: 316 IAPAESPDVTQRMVIITGPPEAQFKAQGRI 345
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 88/401 (21%), Positives = 149/401 (37%), Gaps = 91/401 (22%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKEDVEV 98
R+L P +G++IGK G I +I ++T+++V + GA ++ +TI+S
Sbjct: 47 RMLVPTQFVGAIIGKEGLTIKNITKQTQSKVDIHRKENAGAAEKPITIHS---------- 96
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
E A ++ + A D K E +IL +S +IGK
Sbjct: 97 -----TPEGCSTACHMIMDIMQKEA--------VDTKVTEDIPLKILAHNSLVGRLIGKE 143
Query: 159 GATIKRLRSKTRTSIKVTP-KDAS--EPTHSCAMEFDNFVLISGESEAVKKALFAISAIM 215
G +K++ T T I ++ +D + P + ++ E E +KK A +
Sbjct: 144 GRNLKKIEEDTETKITISSLQDLTIYNPERTIIVKGSIEACCRAEVEIMKKLREAYENDV 203
Query: 216 YKFSPRED-IP---------LETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVP 265
+ + + IP T + PP+ P +P PP G +P L S
Sbjct: 204 AAINQQSNLIPGLSLSALGIFSTGLSVLPPA-AGPRGIPPVPPTGY----NPFLGHSS-- 256
Query: 266 SILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGK 325
+ G VP G + P E+ V+ + P +G +IGK
Sbjct: 257 QLGGLYGVPPASGISHQHTQAP------------------EQEVVYLFIPTQAVGAIIGK 298
Query: 326 GGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAV-----EAVLLLQTK 380
G IK + + +GA I + ESPD + M + EA Q +
Sbjct: 299 KGQHIKQLARFAGASIKIAPA--------------ESPDVTQRMVIITGPPEAQFKAQGR 344
Query: 381 I----------NDEDDDTVTIRLLVSSKVIGCIIGKSGSII 411
I +++ + + V S G +IGK G +
Sbjct: 345 IFGKLKEENFFTAKEEVKLETHIKVPSSAAGRVIGKGGKTV 385
Score = 38.9 bits (89), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 55/140 (39%), Gaps = 24/140 (17%)
Query: 25 INEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDP-FPGAKDRV 83
I+ + + E+ V+Y + P +G++IGK G+ I + + A +K+ P R+
Sbjct: 270 ISHQHTQAPEQEVVY-LFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAESPDVTQRM 328
Query: 84 VTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQ 143
V I +A K I + K + K E
Sbjct: 329 VII----------------------TGPPEAQFKAQGRIFGKLKEENFFTAKEEVKLETH 366
Query: 144 ILVPSSQSANIIGKAGATIK 163
I VPSS + +IGK G T++
Sbjct: 367 IKVPSSAAGRVIGKGGKTVR 386
>gi|363543195|ref|NP_001241811.1| RNA-binding protein Nova-1 [Zea mays]
gi|195659123|gb|ACG49029.1| RNA-binding protein Nova-1 [Zea mays]
Length = 344
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 151/331 (45%), Gaps = 30/331 (9%)
Query: 301 GASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD---NRDECVITV 357
G + + + +R L G +IGKGG TI + SGA+I + + + ++ +I V
Sbjct: 33 GDDKEKPIHLRFLVSNASAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRIIMV 92
Query: 358 TAIESPDDIKSMA-VEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
+ + + +K+M + LL + + +E + +RL+V + G IIGK G+ I +
Sbjct: 93 SGLFG-EVMKAMELILEKLLAEGEEFNEAEARPKVRLVVPNNSCGGIIGKGGATIKSFIE 151
Query: 417 RTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPV 476
+ A ++IS D +D LV V G + +A+ I+ +L +D + S P
Sbjct: 152 ESHAGIKISPQDN-NYVGLHDRLVTVTGTFDNQMNAIDLILKKLSEDVHYPANLSSPFPY 210
Query: 477 GADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPY 536
A + S G+ + ++P +P Y+ + G GYG + P
Sbjct: 211 -AGLTFPSYPGVPVGYMIPQVP------YNNAVNYGPN---------NGYGGRYQNNKPS 254
Query: 537 GSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSK--- 593
M S +S +L + + +G V+G+AG N+ I + SGA I++SD
Sbjct: 255 TPMRSPASN-----EAQESLTIGIADEHIGAVVGRAGRNITEIIQASGARIKISDRGDFI 309
Query: 594 SSRGDRVALISGTPEQKRAAENLIQAFIMAT 624
S DR I+GT E R AE++I + A+
Sbjct: 310 SGTSDRKVTITGTSEAIRTAESMIMQRVSAS 340
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 133/327 (40%), Gaps = 56/327 (17%)
Query: 27 EKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV---DPFPGAKDRV 83
E D+K E+ + R L + G +IGK G IN + ++ AR+++ + FPG DR+
Sbjct: 32 EGDDK--EKPIHLRFLVSNASAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRI 89
Query: 84 VTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQ 143
+ + + ++K I + + + + + + +
Sbjct: 90 IMVSGLFGE----------------------VMKAMELILEKLLAEGEEFNEAEARPKVR 127
Query: 144 ILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEA 203
++VP++ IIGK GATIK ++ IK++P+D ++ D V ++G
Sbjct: 128 LVVPNNSCGGIIGKGGATIKSFIEESHAGIKISPQD-----NNYVGLHDRLVTVTG---T 179
Query: 204 VKKALFAISAIMYKFSPREDIPLETTVREAPP--SIIIPSDVPIYPPGGLYPNADPILPS 261
+ AI I+ K S ED+ + P + PS P P G + P
Sbjct: 180 FDNQMNAIDLILKKLS--EDVHYPANLSSPFPYAGLTFPS-YPGVPVGYMIPQ------- 229
Query: 262 RSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGR 321
VP P+ GY G + + S +Q E L I + IG
Sbjct: 230 --VPYNNAVNYGPN-NGY---GGRYQNNKPSTPMRSPASNEAQ-ESLTIGIAD--EHIGA 280
Query: 322 VIGKGGGTIKSIRQASGAQIDVDDTKD 348
V+G+ G I I QASGA+I + D D
Sbjct: 281 VVGRAGRNITEIIQASGARIKISDRGD 307
>gi|73985377|ref|XP_849987.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Canis lupus
familiaris]
gi|301767222|ref|XP_002919000.1| PREDICTED: poly(rC)-binding protein 4-like isoform 1 [Ailuropoda
melanoleuca]
Length = 403
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 155/329 (47%), Gaps = 52/329 (15%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
L +R+L ++G +IGK G T+K IR+ S A+I + + + E + T+T
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE--GSCPERITTITGS------T 69
Query: 368 SMAVEAVLLLQTKINDED------------DDTVTIRLLVSSKVIGCIIGKSGSIINEIR 415
+ AV ++ K+ DED VT+RL++ + G +IGK+G+ I EIR
Sbjct: 70 AAVFHAVSMIAFKL-DEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIR 128
Query: 416 KRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPP 475
+ T A V+++ P ++ + V V G V DA++ + ++ L+ +PP
Sbjct: 129 ETTGAQVQVAGDLLP---NSTERAVTVSG----VPDAIILCVRQICAVILE------SPP 175
Query: 476 VGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSP 535
GA Y +S+ +L L +Q G ++ + + LS P
Sbjct: 176 KGATIPYHPS--LSLGTVL--------LSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVP 225
Query: 536 YGSMSSYSSKLYGGLPPPL---TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDS 592
+ S S + GL P + E LVP + +G VIG+ GS ++ IR++SGA I++ +
Sbjct: 226 FASPS-----MVPGLDPGAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQ 280
Query: 593 KSSRGDRVALISGTPEQKRAAENLIQAFI 621
G+R I+G+P A+ LI A +
Sbjct: 281 AEGAGERHVTITGSPVSIALAQYLITACL 309
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 133/325 (40%), Gaps = 51/325 (15%)
Query: 36 SVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKED 95
++ R+L +GS+IGK G+ + IR+++ AR+ + + +R+ TI
Sbjct: 17 TLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGSTAAVFH 74
Query: 96 VEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANII 155
F E LCAA + + ++++P+SQ ++I
Sbjct: 75 AVSMIAFKLDEDLCAA-----------------PANGGNVSRPPVTLRLVIPASQCGSLI 117
Query: 156 GKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIM 215
GKAG IK +R T ++V T + V +SG +A+ + I A++
Sbjct: 118 GKAGTKIKEIRETTGAQVQVAGDLLPNST-------ERAVTVSGVPDAIILCVRQICAVI 170
Query: 216 YKFSPR-EDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVP 274
+ P+ IP ++ ++ S + G Y P A V
Sbjct: 171 LESPPKGATIPYHPSLSLG---TVLLSANQGFSVQGQYGAVTP-------------AEVT 214
Query: 275 DLQGYADTGNTWPVYSTGLSLVSGL-VGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSI 333
LQ +G+ P S S+V GL GA S + L P + IG VIG+ G I I
Sbjct: 215 KLQQL--SGHAVPFASP--SMVPGLDPGAQTSSQ---EFLVPNDLIGCVIGRQGSKISEI 267
Query: 334 RQASGAQIDVDDTKDNRDECVITVT 358
RQ SGA I + + + E +T+T
Sbjct: 268 RQMSGAHIKIGNQAEGAGERHVTIT 292
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 384 EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVV 443
E T+T+R+L+ K +G IIGK G + IR+++ A + IS+G P + + +
Sbjct: 13 ELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCP------ERITTIT 66
Query: 444 GEVGSVRDALVQIILRLRDD 463
G +V A+ I +L +D
Sbjct: 67 GSTAAVFHAVSMIAFKLDED 86
>gi|330914909|ref|XP_003296833.1| hypothetical protein PTT_07029 [Pyrenophora teres f. teres 0-1]
gi|311330863|gb|EFQ95085.1| hypothetical protein PTT_07029 [Pyrenophora teres f. teres 0-1]
Length = 485
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 165/368 (44%), Gaps = 68/368 (18%)
Query: 304 QSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESP 363
++ L +R ++ +IGKGG + IR+ SGA+ V D E ++TV+
Sbjct: 126 ETNWLHVRACIGTSEAATIIGKGGENVTQIRRLSGAKCTVSDYSRGAVERILTVSG---- 181
Query: 364 DDIKSMAVEAVLLLQTKINDEDDDTVT--------IRLLVSSKVIGCIIGKSGSIINEIR 415
+ +++ L+++T +N ED +T + +RLL+ +IG IIGK+G I EI+
Sbjct: 182 -QVDAVSKAFGLIVRT-LNQEDLETPSTSTSKAYPMRLLIPHILIGSIIGKAGIRIREIQ 239
Query: 416 KRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPP 475
+ + A + S P ++ + + V+G +V A+ + L + L +R G P
Sbjct: 240 EASNAKLNASDTLLP---NSGERSLIVLGVADAVHIAVYYVAQTLVEQ-LTERFGG---P 292
Query: 476 VGADHIYSSGT-------GISMPPLLPSIPPVGPLGYDQR-----------ADSGSGI-- 515
+ + SG G+S+ P +P P G + Q A G G
Sbjct: 293 AASQYATRSGMAANVVPGGMSVQPYVPQ-PAGGQYSHPQNFRRQEPPQRTPAHGGYGAPH 351
Query: 516 --GMLSSSSLYG-----YGSLSMGDSPYGSMSSYS------------------SKLYGGL 550
G S YG YG+ S PYG ++ + G +
Sbjct: 352 MHGQPPQQSPYGHPNMPYGAGSPSRGPYGGPAAPTPYGAHPAAAPVAHGGAAPHAAVGAM 411
Query: 551 P-PPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQ 609
P PLT ++ +P + VG +IGK G+ + IR++SG+ I++++ + +R+ I+GT E
Sbjct: 412 PGQPLTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPTDNSNERLVTITGTQEC 471
Query: 610 KRAAENLI 617
+ A ++
Sbjct: 472 NQMALYML 479
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 75/359 (20%), Positives = 137/359 (38%), Gaps = 79/359 (22%)
Query: 50 SVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLC 109
++IGK G+ + IR+ + A+ V D GA +R++T+ V
Sbjct: 143 TIIGKGGENVTQIRRLSGAKCTVSDYSRGAVERILTVSGQV------------------- 183
Query: 110 AAQDALLKVHAAIANAVANATDNDKKRKEKEEC---QILVPSSQSANIIGKAGATIKRLR 166
DA+ K I + N D + + ++L+P +IIGKAG I+ ++
Sbjct: 184 ---DAVSKAFGLIVRTL-NQEDLETPSTSTSKAYPMRLLIPHILIGSIIGKAGIRIREIQ 239
Query: 167 SKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAIS-AIMYKFSPREDIP 225
+ K+ D P + +++ G ++AV A++ ++ ++ + + R P
Sbjct: 240 EASNA--KLNASDTLLPNSG-----ERSLIVLGVADAVHIAVYYVAQTLVEQLTERFGGP 292
Query: 226 L--ETTVREAPPSIIIPSDVPIYP-----PGGLY-----------PNADPILPSRSVPSI 267
+ R + ++P + + P GG Y P P P +
Sbjct: 293 AASQYATRSGMAANVVPGGMSVQPYVPQPAGGQYSHPQNFRRQEPPQRTPAHGGYGAPHM 352
Query: 268 LGAARVPDLQGYADTGNTWPVYSTGLSLVSG-------------------------LVGA 302
G + P Y + S G VGA
Sbjct: 353 HG--QPPQQSPYGHPNMPYGAGSPSRGPYGGPAAPTPYGAHPAAAPVAHGGAAPHAAVGA 410
Query: 303 SQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIE 361
+ L ++ P + +G +IGKGG I IRQ SG+ I +++ DN +E ++T+T +
Sbjct: 411 MPGQPLTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPTDNSNERLVTITGTQ 469
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 34/52 (65%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTI 86
+ + +I P+ ++G++IGK G IN IRQ + + +K+ +P + +R+VTI
Sbjct: 414 QPLTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPTDNSNERLVTI 465
>gi|341894976|gb|EGT50911.1| hypothetical protein CAEBREN_13773 [Caenorhabditis brenneri]
Length = 397
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 95/361 (26%), Positives = 157/361 (43%), Gaps = 54/361 (14%)
Query: 298 GLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITV 357
G A Q + +R+L G +IGKGG IK +R A + V D+ N E V TV
Sbjct: 40 GFTEAIQQGKFEVRLLVSSKSAGAIIGKGGENIKRLRAEFNAHVQVPDS--NTPERVCTV 97
Query: 358 TAIESPDDIKSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKR 417
TA D+ + + +L + + N + D +R+L+ G +IG++GS I E+R++
Sbjct: 98 TA----DEKTVLNILKDVLPRLEDNFSERDPCEVRMLIHQSHAGALIGRNGSKIKELREK 153
Query: 418 TKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVG 477
A ++I G P + D ++ GE +V + +++ L++ +K GS P +
Sbjct: 154 CSARLKIFTGCAP---GSTDRVLITSGEQKNVLAIIEEVMRELKEIPIK---GSATPYLP 207
Query: 478 ADHIYSSGTGISMPPLLP-SIPPVGPLGYDQRADSGSGIGMLSSSSLYGYG--------- 527
+ H S IS P ++ GP + R S G YG
Sbjct: 208 SFHYDPS--NISEYGGFPGTMSSGGPP--NSRGPSQQRGGQGPPGGPRSYGGAVTPGGGP 263
Query: 528 -SLSMGDSPY---GSMSSYSSKL---------YGGLPPP--------------LTLEVLV 560
S GD G + Y+ +GG PP T +V +
Sbjct: 264 RSFEAGDFQQFRGGPVQGYAMNAPGYPPQQGQFGGAPPANTGYGYGPGGGGPVTTAQVTI 323
Query: 561 PANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAF 620
P++ G +IG+ G +A IR+ SGA I + S + + +R+ I GT +Q +A+ L+Q
Sbjct: 324 PSDLGGTIIGRGGERIARIRQDSGAQITLEPS-NGQPERIITIKGTEQQIHSAQYLLQQC 382
Query: 621 I 621
+
Sbjct: 383 V 383
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 92/409 (22%), Positives = 154/409 (37%), Gaps = 102/409 (24%)
Query: 3 DSGKRYRSQRDND---RDGKNQKRRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVI 59
DS K + + DND R ++++ + + E + R+L G++IGK G+ I
Sbjct: 13 DSPKAMKREHDNDEADRTARHKRPKTDGFTEAIQQGKFEVRLLVSSKSAGAIIGKGGENI 72
Query: 60 NSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDV------EVDDEFNDKEPLCAAQD 113
+R E A V+V D +RV T+ + K ++ ++D F++++P
Sbjct: 73 KRLRAEFNAHVQVPD--SNTPERVCTVTADEKTVLNILKDVLPRLEDNFSERDPC----- 125
Query: 114 ALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSI 173
E ++L+ S + +IG+ G+ IK LR K +
Sbjct: 126 ---------------------------EVRMLIHQSHAGALIGRNGSKIKELREKCSARL 158
Query: 174 KVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREA 233
K+ A T D ++ SGE K L I +M + ++IP++ +
Sbjct: 159 KIFTGCAPGST-------DRVLITSGEQ---KNVLAIIEEVMREL---KEIPIKGSATPY 205
Query: 234 PPSIII-PSDVPIY-----------PP----------------------GGLYPNADPIL 259
PS PS++ Y PP G + P P
Sbjct: 206 LPSFHYDPSNISEYGGFPGTMSSGGPPNSRGPSQQRGGQGPPGGPRSYGGAVTPGGGP-- 263
Query: 260 PSRSVPSI-LGAARVPDLQGYADTGNTWPVYSTGL------SLVSGLVGASQSEELVIRV 312
RS + R +QGYA +P + G +V
Sbjct: 264 --RSFEAGDFQQFRGGPVQGYAMNAPGYPPQQGQFGGAPPANTGYGYGPGGGGPVTTAQV 321
Query: 313 LCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIE 361
P + G +IG+GG I IRQ SGAQI ++ + + + E +IT+ E
Sbjct: 322 TIPSDLGGTIIGRGGERIARIRQDSGAQITLEPS-NGQPERIITIKGTE 369
>gi|387915508|gb|AFK11363.1| alphaCP-3 [Callorhinchus milii]
Length = 349
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 156/339 (46%), Gaps = 42/339 (12%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDD-- 365
L IR+L ++G +IGK G T+K +R+ SGA+I++ + N E ++T+T P D
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG---PTDAI 68
Query: 366 IKSMAVEAVLLLQTKINDEDDDT-------VTIRLLVSSKVIGCIIGKSGSIINEIRKRT 418
K+ A+ A + IN+ ++ VT+RL+V + G +IGK GS I EIR+ T
Sbjct: 69 FKAFAMIA-FKFEEDINNSMTNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIREST 127
Query: 419 KADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNP-PVG 477
A V+++ P ++ + V + G ++ + QI + + + K P P
Sbjct: 128 GAQVQVAGDMLP---NSTERAVTISGMPDAIIQCVKQICVVMLESPPKGATIPYRPKPAS 184
Query: 478 ADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYG 537
A I++ G ++ +IP D + +S+L+ L+ S
Sbjct: 185 APVIFAGGQAYTIQGQC-AIP-----HPDDACLLSAEYKTALTSTLWRSPQLAHPSSQLK 238
Query: 538 SMSSYSSKLYGGL-----------------PPPLTLEVLVPANAVGKVIGKAGSNLANIR 580
+ L G + P T E+ +P + +G +IG+ G+ + IR
Sbjct: 239 EAAWRPESLRGKMELKNCNEESENWGMDANPQASTHELTIPNDLIGCIIGRQGTKINEIR 298
Query: 581 KISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQA 619
++SGA I+++++ +R I+G+P A+ LI A
Sbjct: 299 QMSGAQIKIANATEGSTERQITITGSPANISLAQYLINA 337
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 93/370 (25%), Positives = 143/370 (38%), Gaps = 81/370 (21%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH 89
E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R+VTI
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTIT-- 62
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVA-----NATDNDKKRKEKEECQI 144
DA+ K A IA + T++ K ++
Sbjct: 63 --------------------GPTDAIFKAFAMIAFKFEEDINNSMTNSPATSKPPVTLRL 102
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAV 204
+VP+SQ ++IGK G+ IK +R T ++V T + V ISG +A+
Sbjct: 103 VVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNST-------ERAVTISGMPDAI 155
Query: 205 KKALFAISAIMYKFSPR-EDIPLETTVREAP------PSIIIPSDVPIYPP------GGL 251
+ + I +M + P+ IP AP + I I P
Sbjct: 156 IQCVKQICVVMLESPPKGATIPYRPKPASAPVIFAGGQAYTIQGQCAIPHPDDACLLSAE 215
Query: 252 YPNA-------DPILPSRSVPSILGAARVPDLQGYADTGNT------WPVYSTGLSLVSG 298
Y A P L S A R L+G + N W G
Sbjct: 216 YKTALTSTLWRSPQLAHPSSQLKEAAWRPESLRGKMELKNCNEESENW-----------G 264
Query: 299 LVGASQ--SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVIT 356
+ Q + EL I P + IG +IG+ G I IRQ SGAQI + + + E IT
Sbjct: 265 MDANPQASTHELTI----PNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSTERQIT 320
Query: 357 VTAIESPDDI 366
+T SP +I
Sbjct: 321 ITG--SPANI 328
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+TIRLL+ K +G IIGK G + ++R+ + A + IS+G+ P + +V + G
Sbjct: 13 TLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCP------ERIVTITGPTD 66
Query: 448 SVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
++ A I + +D ++ + + PPV
Sbjct: 67 AIFKAFAMIAFKFEEDINNSMTNSPATSKPPV 98
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Query: 10 SQRDNDRDGKNQKRRINEKDEK----GNEESVIYRILCPDGVIGSVIGKSGKVINSIRQE 65
+ R GK + + NE+ E N ++ + + P+ +IG +IG+ G IN IRQ
Sbjct: 241 AWRPESLRGKMELKNCNEESENWGMDANPQASTHELTIPNDLIGCIIGRQGTKINEIRQM 300
Query: 66 TRARVKVVDPFPGAKDRVVTI 86
+ A++K+ + G+ +R +TI
Sbjct: 301 SGAQIKIANATEGSTERQITI 321
>gi|194701786|gb|ACF84977.1| unknown [Zea mays]
Length = 344
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 151/331 (45%), Gaps = 30/331 (9%)
Query: 301 GASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD---NRDECVITV 357
G + + + +R L G +IGKGG TI + SGA+I + + + ++ +I V
Sbjct: 33 GDDKEKPIHLRFLVSNASAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRIIMV 92
Query: 358 TAIESPDDIKSMA-VEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
+ + + +K+M + LL + + +E + +RL+V + G IIGK G+ I +
Sbjct: 93 SGLFG-EVMKAMELILEKLLAEGEEFNEAEARPKVRLVVPNSSCGGIIGKGGATIKSFIE 151
Query: 417 RTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPV 476
+ A ++IS D +D LV V G + +A+ I+ +L +D + S P
Sbjct: 152 ESHAGIKISPQDN-NYVGLHDRLVTVTGTFDNQMNAIDLILKKLSEDVHYPANLSSPFPY 210
Query: 477 GADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPY 536
A + S G+ + ++P +P Y+ + G GYG + P
Sbjct: 211 -AGLTFPSYPGVPVGYMIPQVP------YNNAVNYGPN---------NGYGGRYQNNKPS 254
Query: 537 GSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSK--- 593
M S +S +L + + +G V+G+AG N+ I + SGA I++SD
Sbjct: 255 TPMRSPASN-----EAQESLTIGIADEHIGAVVGRAGRNITEIIQASGARIKISDRGDFI 309
Query: 594 SSRGDRVALISGTPEQKRAAENLIQAFIMAT 624
S DR I+GT E R AE++I + A+
Sbjct: 310 SGTSDRKVTITGTSEAIRTAESMIMQRVSAS 340
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 133/327 (40%), Gaps = 56/327 (17%)
Query: 27 EKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV---DPFPGAKDRV 83
E D+K E+ + R L + G +IGK G IN + ++ AR+++ + FPG DR+
Sbjct: 32 EGDDK--EKPIHLRFLVSNASAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRI 89
Query: 84 VTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQ 143
+ + + ++K I + + + + + + +
Sbjct: 90 IMVSGLFGE----------------------VMKAMELILEKLLAEGEEFNEAEARPKVR 127
Query: 144 ILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEA 203
++VP+S IIGK GATIK ++ IK++P+D ++ D V ++G
Sbjct: 128 LVVPNSSCGGIIGKGGATIKSFIEESHAGIKISPQD-----NNYVGLHDRLVTVTG---T 179
Query: 204 VKKALFAISAIMYKFSPREDIPLETTVREAPP--SIIIPSDVPIYPPGGLYPNADPILPS 261
+ AI I+ K S ED+ + P + PS P P G + P
Sbjct: 180 FDNQMNAIDLILKKLS--EDVHYPANLSSPFPYAGLTFPS-YPGVPVGYMIPQ------- 229
Query: 262 RSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGR 321
VP P+ GY G + + S +Q E L I + IG
Sbjct: 230 --VPYNNAVNYGPN-NGY---GGRYQNNKPSTPMRSPASNEAQ-ESLTIGIAD--EHIGA 280
Query: 322 VIGKGGGTIKSIRQASGAQIDVDDTKD 348
V+G+ G I I QASGA+I + D D
Sbjct: 281 VVGRAGRNITEIIQASGARIKISDRGD 307
>gi|397495989|ref|XP_003818826.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Pan paniscus]
gi|397495991|ref|XP_003818827.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Pan paniscus]
Length = 403
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 155/329 (47%), Gaps = 52/329 (15%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
L +R+L ++G +IGK G T+K IR+ S A+I + + + E + T+T
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE--GSCPERITTITGS------T 69
Query: 368 SMAVEAVLLLQTKINDED------------DDTVTIRLLVSSKVIGCIIGKSGSIINEIR 415
+ AV ++ K+ DED VT+RL++ + G +IGK+G+ I EIR
Sbjct: 70 AAVFHAVSMIAFKL-DEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIR 128
Query: 416 KRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPP 475
+ T A V+++ P ++ + V V G V DA++ + ++ L+ +PP
Sbjct: 129 ETTGAQVQVAGDLLP---NSTERAVTVSG----VPDAIILCVRQICAVILE------SPP 175
Query: 476 VGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSP 535
GA Y +S+ +L L +Q G ++ + + LS P
Sbjct: 176 KGATIPYHPS--LSLGTVL--------LSANQGFSVQGQYGAVTPAEVTKLQQLSSHAVP 225
Query: 536 YGSMSSYSSKLYGGLPPPL---TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDS 592
+ + S + GL P + E LVP + +G VIG+ GS ++ IR++SGA I++ +
Sbjct: 226 FATPS-----MVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQ 280
Query: 593 KSSRGDRVALISGTPEQKRAAENLIQAFI 621
G+R I+G+P A+ LI A +
Sbjct: 281 AEGAGERHVTITGSPVSIALAQYLITACL 309
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 133/339 (39%), Gaps = 79/339 (23%)
Query: 36 SVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKED 95
++ R+L +GS+IGK G+ + IR+++ AR+ + + +R+ TI
Sbjct: 17 TLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGSTAAVFH 74
Query: 96 VEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANII 155
F E LCAA + + ++++P+SQ ++I
Sbjct: 75 AVSMIAFKLDEDLCAA-----------------PANGGNVSRPPVTLRLVIPASQCGSLI 117
Query: 156 GKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIM 215
GKAG IK +R T ++V T + V +SG +A+ + I A++
Sbjct: 118 GKAGTKIKEIRETTGAQVQVAGDLLPNST-------ERAVTVSGVPDAIILCVRQICAVI 170
Query: 216 YKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPD 275
+ P+ + +P + PS S+ ++L +A
Sbjct: 171 LESPPKG------------------ATIPYH-------------PSLSLGTVLLSAN--- 196
Query: 276 LQGYA---DTGNTWPVYSTGL-------------SLVSGLVGASQSEELVIRVLCPFNKI 319
QG++ G P T L S+V GL +Q+ L P + I
Sbjct: 197 -QGFSVQGQYGAVTPAEVTKLQQLSSHAVPFATPSMVPGLDPGTQTSSQ--EFLVPNDLI 253
Query: 320 GRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
G VIG+ G I IRQ SGA I + + + E +T+T
Sbjct: 254 GCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTIT 292
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 384 EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVV 443
E T+T+R+L+ K +G IIGK G + IR+++ A + IS+G P + + +
Sbjct: 13 ELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCP------ERITTIT 66
Query: 444 GEVGSVRDALVQIILRLRDD 463
G +V A+ I +L +D
Sbjct: 67 GSTAAVFHAVSMIAFKLDED 86
>gi|126336339|ref|XP_001367908.1| PREDICTED: poly(rC)-binding protein 4-like isoform 1 [Monodelphis
domestica]
Length = 410
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 155/329 (47%), Gaps = 52/329 (15%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
L +R++ ++G +IGK G T+K IR+ S A+I + + + E + T+T
Sbjct: 18 LTLRMIMHGKEVGSIIGKKGETVKRIREQSSARITISE--GSCPERITTITGS------T 69
Query: 368 SMAVEAVLLLQTKINDEDDDT------------VTIRLLVSSKVIGCIIGKSGSIINEIR 415
AV ++ K+ DED T VT+RL++ + G +IGK+G+ I EIR
Sbjct: 70 GAVFHAVSMIAFKL-DEDLCTGPPNGGSISKPPVTLRLVIPASQCGSLIGKAGTKIKEIR 128
Query: 416 KRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPP 475
+ T A V+++ P ++ + V V G V DA++ + ++ L+ +PP
Sbjct: 129 ETTGAQVQVAGDLLP---NSTERAVTVSG----VPDAIILCVRQICAVILE------SPP 175
Query: 476 VGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSP 535
GA Y +S+ +L L +Q G ++ + + LS P
Sbjct: 176 KGATIPYHPS--LSLGTVL--------LSANQGFSVQGQYGTVTPAEVSKLQQLSGHPVP 225
Query: 536 YGSMSSYSSKLYGGLPPPL---TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDS 592
+ S S + GL P + E LVP + +G VIG+ GS ++ IR++SGA I++ +
Sbjct: 226 FASPS-----VVPGLDPSAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQ 280
Query: 593 KSSRGDRVALISGTPEQKRAAENLIQAFI 621
G+R I+G+P A+ LI A +
Sbjct: 281 AEGSGERHVTITGSPVSIALAQYLITACL 309
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 131/324 (40%), Gaps = 49/324 (15%)
Query: 36 SVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKED 95
++ R++ +GS+IGK G+ + IR+++ AR+ + + +R+ TI
Sbjct: 17 TLTLRMIMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGSTGAVFH 74
Query: 96 VEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANII 155
F E LC + K ++++P+SQ ++I
Sbjct: 75 AVSMIAFKLDEDLCTGPP-----------------NGGSISKPPVTLRLVIPASQCGSLI 117
Query: 156 GKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIM 215
GKAG IK +R T ++V T + V +SG +A+ + I A++
Sbjct: 118 GKAGTKIKEIRETTGAQVQVAGDLLPNST-------ERAVTVSGVPDAIILCVRQICAVI 170
Query: 216 YKFSPR-EDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVP 274
+ P+ IP ++ ++ S + G Y P A V
Sbjct: 171 LESPPKGATIPYHPSLSLG---TVLLSANQGFSVQGQYGTVTP-------------AEVS 214
Query: 275 DLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIR 334
LQ +G+ P S S+V GL ++Q+ L P + IG VIG+ G I IR
Sbjct: 215 KLQQL--SGHPVPFASP--SVVPGLDPSAQTSSQ--EFLVPNDLIGCVIGRQGSKISEIR 268
Query: 335 QASGAQIDVDDTKDNRDECVITVT 358
Q SGA I + + + E +T+T
Sbjct: 269 QMSGAHIKIGNQAEGSGERHVTIT 292
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 20/110 (18%)
Query: 384 EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVV 443
E T+T+R+++ K +G IIGK G + IR+++ A + IS+G P + + +
Sbjct: 13 ELSITLTLRMIMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCP------ERITTIT 66
Query: 444 GEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSGTGISMPPL 493
G G+V A+ I +L D D PP G IS PP+
Sbjct: 67 GSTGAVFHAVSMIAFKL------DEDLCTGPPNGGS--------ISKPPV 102
>gi|348581993|ref|XP_003476761.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Cavia porcellus]
Length = 403
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 155/329 (47%), Gaps = 52/329 (15%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
L +R+L ++G +IGK G T+K IR+ S A+I + + + E + T+T
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE--GSCPERITTITGS------T 69
Query: 368 SMAVEAVLLLQTKINDED------------DDTVTIRLLVSSKVIGCIIGKSGSIINEIR 415
+ AV ++ K+ DED VT+RL++ + G +IGK+G+ I EIR
Sbjct: 70 AAVFHAVSMIAFKL-DEDLCAAPANGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIR 128
Query: 416 KRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPP 475
+ T A V+++ P ++ + V V G V DA++ + ++ L+ +PP
Sbjct: 129 ETTGAQVQVAGDLLP---NSTERAVTVSG----VPDAIILCVRQICAVILE------SPP 175
Query: 476 VGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSP 535
GA Y +S+ +L L +Q G ++ + + LS P
Sbjct: 176 KGATIPYHPS--LSLGTVL--------LSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVP 225
Query: 536 YGSMSSYSSKLYGGLPPPL---TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDS 592
+ S S + GL P + E LVP + +G VIG+ GS ++ IR++SGA I++ +
Sbjct: 226 FASPS-----VVPGLDPAAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQ 280
Query: 593 KSSRGDRVALISGTPEQKRAAENLIQAFI 621
G+R I+G+P A+ LI A +
Sbjct: 281 AEGAGERHITITGSPVSIALAQYLITACL 309
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 133/324 (41%), Gaps = 49/324 (15%)
Query: 36 SVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKED 95
++ R+L +GS+IGK G+ + IR+++ AR+ + + +R+ TI
Sbjct: 17 TLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGSTAAVFH 74
Query: 96 VEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANII 155
F E LCAA + + ++++P+SQ ++I
Sbjct: 75 AVSMIAFKLDEDLCAA-----------------PANGGSVSRPPVTLRLVIPASQCGSLI 117
Query: 156 GKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIM 215
GKAG IK +R T ++V T + V +SG +A+ + I A++
Sbjct: 118 GKAGTKIKEIRETTGAQVQVAGDLLPNST-------ERAVTVSGVPDAIILCVRQICAVI 170
Query: 216 YKFSPR-EDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVP 274
+ P+ IP ++ ++ S + G Y P A V
Sbjct: 171 LESPPKGATIPYHPSLSLG---TVLLSANQGFSVQGQYGAVTP-------------AEVT 214
Query: 275 DLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIR 334
LQ +G+ P S S+V GL A+Q+ L P + IG VIG+ G I IR
Sbjct: 215 KLQQL--SGHAVPFASP--SVVPGLDPAAQTSSQ--EFLVPNDLIGCVIGRQGSKISEIR 268
Query: 335 QASGAQIDVDDTKDNRDECVITVT 358
Q SGA I + + + E IT+T
Sbjct: 269 QMSGAHIKIGNQAEGAGERHITIT 292
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 384 EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVV 443
E T+T+R+L+ K +G IIGK G + IR+++ A + IS+G P + + +
Sbjct: 13 ELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCP------ERITTIT 66
Query: 444 GEVGSVRDALVQIILRLRDD 463
G +V A+ I +L +D
Sbjct: 67 GSTAAVFHAVSMIAFKLDED 86
>gi|417410101|gb|JAA51528.1| Putative polyc-binding alphacp-1, partial [Desmodus rotundus]
Length = 365
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 95/362 (26%), Positives = 165/362 (45%), Gaps = 50/362 (13%)
Query: 293 LSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDE 352
L++ +G+ + + L IR+L ++G +IGK G ++K IR+ SGA+I++ + N E
Sbjct: 8 LAMDAGVTESGLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPE 65
Query: 353 CVITVTAIESPDDIKSMAVEAVL-LLQTKINDEDDDT-------VTIRLLVSSKVIGCII 404
+IT+T P + A ++ L+ IN ++ VT+RL+V + G +I
Sbjct: 66 RIITLTG---PTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLI 122
Query: 405 GKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDA 464
GK G I EIR+ T A V+++ P ++ + + + G SV + + QI L + +
Sbjct: 123 GKGGCKIKEIRESTGAQVQVAGDMLP---NSTERAITIAGVPQSVTECVKQICLVMLETL 179
Query: 465 LKDRDGS----------RNPPV----GADHI-----YSSGTG-ISMPPL-------LPSI 497
+ G + PV G D Y T + PPL +I
Sbjct: 180 SQSPQGRVMTIPYQPMPASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTI 239
Query: 498 PPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLE 557
P+ +Q A S M+ + G+ + DS + Y + L T E
Sbjct: 240 SPLDLAKLNQVARQQSHFAMMHGGT--GFAGI---DSSSPEVKGYWASLDAST--QTTHE 292
Query: 558 VLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLI 617
+ +P N +G +IG+ G+N+ IR++SGA I++++ R I+G+ A+ LI
Sbjct: 293 LTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLI 352
Query: 618 QA 619
A
Sbjct: 353 NA 354
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 82/366 (22%), Positives = 146/366 (39%), Gaps = 79/366 (21%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH 89
E G ++ R+L +GS+IGK G+ + IR+E+ AR+ + + +R++T
Sbjct: 16 ESGLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIIT---- 69
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAV-----ANATDNDKKRKEKEECQI 144
L +A+ K A I + + ++ T++ + ++
Sbjct: 70 ------------------LTGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRL 111
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAV 204
+VP++Q ++IGK G IK +R T ++V T + + I+G ++V
Sbjct: 112 VVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNST-------ERAITIAGVPQSV 164
Query: 205 KKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGL--------YPNAD 256
+ + I +M + + T+ P +P+ P+ GG YP+A
Sbjct: 165 TECVKQICLVMLETLSQSPQGRVMTIPYQP----MPASSPVICAGGQDRCSDAAGYPHAT 220
Query: 257 PIL--PSRSVPSILGAARVPDL---------------------QGYADTGNTWPVYSTGL 293
L P SI G + L G+A ++ P
Sbjct: 221 HDLEGPPLDAYSIQGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVK--- 277
Query: 294 SLVSGLVGASQ-SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDE 352
+ L ++Q + EL I P N IG +IG+ G I IRQ SGAQI + + +
Sbjct: 278 GYWASLDASTQTTHELTI----PNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSG 333
Query: 353 CVITVT 358
+T+T
Sbjct: 334 RQVTIT 339
>gi|449281891|gb|EMC88850.1| Poly(rC)-binding protein 3 [Columba livia]
Length = 330
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 152/341 (44%), Gaps = 54/341 (15%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQA--SGAQIDVDDTKDNRDECVITVTAIESPDD 365
L IR+L ++G +IGK + KS+ + SGA+I++ + N E ++T+T P D
Sbjct: 14 LTIRLLMHGKEVGSIIGKVRMSFKSLPFSFQSGARINISE--GNCPERIVTITG---PTD 68
Query: 366 --IKSMAVEAVLLLQTKINDEDDDT------VTIRLLVSSKVIGCIIGKSGSIINEIRKR 417
K+ A+ A + N + T VT+RL+V + G +IGK GS I EIR+
Sbjct: 69 AIFKAFAMIAYKFEEDITNSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRES 128
Query: 418 TKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNP-PV 476
T A V+++ P ++ + V + G ++ + QI + + + K P P
Sbjct: 129 TGAQVQVAGDMLP---NSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPA 185
Query: 477 GADHIYSSGTG--------ISMPPLLPSI-------PPVGPLGYDQRADSGSGIGMLSSS 521
I++ G I P L + P PLG A G + + SS
Sbjct: 186 STPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFTPLGQTTPAFPGEKLPLHSSE 245
Query: 522 SLYGYGSLSMGDSPYGSMSSYSSKLYGGL---PPPLTLEVLVPANAVGKVIGKAGSNLAN 578
MG S GL PP T E+ +P + +G +IG+ G+ +
Sbjct: 246 EAQNL----MGQS-------------SGLDASPPASTHELTIPNDLIGCIIGRQGTKINE 288
Query: 579 IRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQA 619
IR++SGA I+++++ +R I+GTP A+ LI A
Sbjct: 289 IRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINA 329
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 91/363 (25%), Positives = 148/363 (40%), Gaps = 73/363 (20%)
Query: 29 DEKGNEESVIYRILCPDGVIGSVIGKSGKVINSI--RQETRARVKVVDPFPGAKDRVVTI 86
E G ++ R+L +GS+IGK S+ ++ AR+ + + +R+VTI
Sbjct: 6 SEGGLNVTLTIRLLMHGKEVGSIIGKVRMSFKSLPFSFQSGARINISEG--NCPERIVTI 63
Query: 87 YSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIA--------NAVANATDNDKKRKE 138
DA+ K A IA N+++N+T K
Sbjct: 64 ----------------------TGPTDAIFKAFAMIAYKFEEDITNSMSNSTATSKP--- 98
Query: 139 KEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLIS 198
+++VP+SQ ++IGK G+ IK +R T ++V T + V IS
Sbjct: 99 PVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNST-------ERAVTIS 151
Query: 199 GESEAVKKALFAISAIMYKFSPR-EDIPLETTVREAPPSIIIPSDVPIYPPGGLY--PNA 255
G +A+ + + I +M + P+ IP P +I + Y G Y P+
Sbjct: 152 GTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTP---VIFAGGQAYTIQGQYAIPHP 208
Query: 256 DPI-----LPSRSVPSILGAARVPDLQGYADTGNTWPVYSTG-----LSLVSGLVGA--S 303
D + L + P P A G P++S+ + SGL + +
Sbjct: 209 DQLTKLHQLAMQQTPFTPLGQTTP-----AFPGEKLPLHSSEEAQNLMGQSSGLDASPPA 263
Query: 304 QSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESP 363
+ EL I P + IG +IG+ G I IRQ SGAQI + + + E IT+T +P
Sbjct: 264 STHELTI----PNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITG--TP 317
Query: 364 DDI 366
+I
Sbjct: 318 ANI 320
>gi|24641097|ref|NP_727451.1| IGF-II mRNA-binding protein, isoform D [Drosophila melanogaster]
gi|24641099|ref|NP_727452.1| IGF-II mRNA-binding protein, isoform E [Drosophila melanogaster]
gi|24641101|ref|NP_727453.1| IGF-II mRNA-binding protein, isoform F [Drosophila melanogaster]
gi|24641103|ref|NP_727454.1| IGF-II mRNA-binding protein, isoform G [Drosophila melanogaster]
gi|24641105|ref|NP_727455.1| IGF-II mRNA-binding protein, isoform H [Drosophila melanogaster]
gi|22832052|gb|AAN09269.1| IGF-II mRNA-binding protein, isoform D [Drosophila melanogaster]
gi|22832053|gb|AAN09270.1| IGF-II mRNA-binding protein, isoform E [Drosophila melanogaster]
gi|22832054|gb|AAN09271.1| IGF-II mRNA-binding protein, isoform F [Drosophila melanogaster]
gi|22832055|gb|AAN09272.1| IGF-II mRNA-binding protein, isoform G [Drosophila melanogaster]
gi|22832056|gb|AAN09273.1| IGF-II mRNA-binding protein, isoform H [Drosophila melanogaster]
Length = 573
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 152/333 (45%), Gaps = 49/333 (14%)
Query: 298 GLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITV 357
G+ G + + +R+L +G +IG+ G TI++I Q S A++DV K+N ++
Sbjct: 75 GMPGPGRQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDV-HRKENVGSLEKSI 133
Query: 358 TAIESPDDIKSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKR 417
T +P++ + + ++Q + + + +++L + +IG IIGKSG+ I I +
Sbjct: 134 TIYGNPENCTNACKRILEVMQQEAISTNKGEICLKILAHNNLIGRIIGKSGNTIKRIMQD 193
Query: 418 TKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVG 477
T + +S + + + ++ V G + ++ A QI +LR D
Sbjct: 194 TDTKITVSSINDINSFNL-ERIITVKGLIENMSRAENQISTKLRQSYENDLQ-------- 244
Query: 478 ADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYG 537
+M P P + P+ S G GM+ ++S+ P+
Sbjct: 245 -----------AMAPQSLMFPGLHPMAM----MSTPGNGMVFNTSM-----------PFP 278
Query: 538 SMSSYS-SKLYGGLPPPL-------TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEM 589
S S++ SK + PP+ T + +P NAVG +IG GS++ +I + S A++++
Sbjct: 279 SCQSFAMSKTPASVVPPVFPNDLQETTYLYIPNNAVGAIIGTRGSHIRSIMRFSNASLKI 338
Query: 590 SDSKS-----SRGDRVALISGTPEQKRAAENLI 617
+ + + +R I GTPE + A+ +I
Sbjct: 339 APLDADKPLDQQTERKVTIVGTPEGQWKAQYMI 371
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 107/459 (23%), Positives = 198/459 (43%), Gaps = 75/459 (16%)
Query: 12 RDNDRDGKNQKRRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVK 71
++ R +NQ+ G + RIL ++G++IG+ G I +I Q++RARV
Sbjct: 60 KNQRRSQRNQRNPYPGMPGPGRQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVD 119
Query: 72 VV-DPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANAT 130
V G+ ++ +TIY + ++ + C +++ A N
Sbjct: 120 VHRKENVGSLEKSITIYGNPENCTNA------------CKRILEVMQQEAISTN------ 161
Query: 131 DNDKKRKEKEEC-QILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAM 189
+ E C +IL ++ IIGK+G TIKR+ T T I V S +
Sbjct: 162 -------KGEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITV-----SSINDINSF 209
Query: 190 EFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPG 249
+ + + G E + +A IS + + S D+ AP S++ P ++P
Sbjct: 210 NLERIITVKGLIENMSRAENQISTKLRQ-SYENDLQAM-----APQSLMFPG---LHPMA 260
Query: 250 GLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELV 309
+ + ++ + S+P P Q +A + T S+V + E
Sbjct: 261 MMSTPGNGMVFNTSMP-------FPSCQSFA-------MSKTPASVVPPVFPNDLQETTY 306
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQI-----DVDDTKDNRDECVITVTAIESPD 364
+ + P N +G +IG G I+SI + S A + D D D + E +T+ + +P+
Sbjct: 307 LYI--PNNAVGAIIGTRGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTI--VGTPE 362
Query: 365 DIKSMAVEAVLLLQTKINDE------DDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRT 418
+A ++ K+ +E DD +T+ LLV+S +G IIGK G + E+++ T
Sbjct: 363 G----QWKAQYMIFEKMREEGFMCGTDDVRLTVELLVASSQVGRIIGKGGQNVRELQRVT 418
Query: 419 KADVRISKGDKPKCADANDEL-VEVVGEVGSVRDALVQI 456
+ +++ + + ++E V ++G SV+ A +I
Sbjct: 419 GSVIKLPEHALAPPSGGDEETPVHIIGLFYSVQSAQRRI 457
Score = 38.9 bits (89), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 30/38 (78%)
Query: 554 LTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSD 591
LT+E+LV ++ VG++IGK G N+ +++++G+ I++ +
Sbjct: 389 LTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIKLPE 426
>gi|452004384|gb|EMD96840.1| hypothetical protein COCHEDRAFT_1220374 [Cochliobolus
heterostrophus C5]
Length = 489
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 94/369 (25%), Positives = 166/369 (44%), Gaps = 70/369 (18%)
Query: 304 QSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESP 363
++ L IR ++ +IGKGG + IR+ SGA+ V D E ++TV+
Sbjct: 125 ETNWLHIRACIGTSEAATIIGKGGENVTQIRRLSGAKCTVSDYSRGAVERILTVSG---- 180
Query: 364 DDIKSMAVEAVLLLQTKINDEDDDTVT--------IRLLVSSKVIGCIIGKSGSIINEIR 415
+ +++ L+++T +N ED +T + +RLL+ +IG IIGK+G I EI+
Sbjct: 181 -QVDAVSKAFGLIVRT-LNQEDLETPSTSTSKAYPMRLLIPHILIGSIIGKAGVRIREIQ 238
Query: 416 KRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPP 475
+ + A + S P ++ + + V+G +V A+ + L + L +R G P
Sbjct: 239 EASNAKLNASDTLLP---NSGERSLIVLGVADAVHIAVYYVAQTLVEQ-LTERFGG---P 291
Query: 476 VGADHIYSSGT-------GISMPPLLPSIPPVG-----PLGY-----DQRADSGSG---- 514
+ + SG G+S+ P +P P G P + QR + G
Sbjct: 292 AASQYATRSGMAANVVPGGMSVQPYVPQ--PAGGQYSHPQNFRRQEPAQRTPAHGGGYGA 349
Query: 515 ---IGMLSSSSLYG-----YGSLSMGDSPYGSMSSYS-----------------SKLYGG 549
G S YG YG+ S PYG ++ + G
Sbjct: 350 PHMHGQPPQQSPYGHPNMPYGAASPSRGPYGGPAAPTPYGAHPAAAPVAHGAAPHAPVGS 409
Query: 550 LP-PPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPE 608
+P PLT ++ +P + VG +IGK G+ + IR++SG+ I++++ + +R+ I+GT E
Sbjct: 410 IPGQPLTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPTDNSNERLVTITGTQE 469
Query: 609 QKRAAENLI 617
+ A ++
Sbjct: 470 CNQMALYML 478
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 77/380 (20%), Positives = 150/380 (39%), Gaps = 81/380 (21%)
Query: 50 SVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLC 109
++IGK G+ + IR+ + A+ V D GA +R++T+ V
Sbjct: 142 TIIGKGGENVTQIRRLSGAKCTVSDYSRGAVERILTVSGQV------------------- 182
Query: 110 AAQDALLKVHAAIANAVANATDNDKKRKEKEEC---QILVPSSQSANIIGKAGATIKRLR 166
DA+ K I + N D + + ++L+P +IIGKAG I+ ++
Sbjct: 183 ---DAVSKAFGLIVRTL-NQEDLETPSTSTSKAYPMRLLIPHILIGSIIGKAGVRIREIQ 238
Query: 167 SKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAIS-AIMYKFSPREDIP 225
+ K+ D P + +++ G ++AV A++ ++ ++ + + R P
Sbjct: 239 EASNA--KLNASDTLLPNSG-----ERSLIVLGVADAVHIAVYYVAQTLVEQLTERFGGP 291
Query: 226 L--ETTVREAPPSIIIPSDVPIYP-----PGGLYPNADPIL---PSRSVPSILGAARVPD 275
+ R + ++P + + P GG Y + P++ P+ G P
Sbjct: 292 AASQYATRSGMAANVVPGGMSVQPYVPQPAGGQYSHPQNFRRQEPAQRTPAHGGGYGAPH 351
Query: 276 LQG-------YADTGNTWPVYSTGLSLVSGL------------------------VGASQ 304
+ G Y + S G VG+
Sbjct: 352 MHGQPPQQSPYGHPNMPYGAASPSRGPYGGPAAPTPYGAHPAAAPVAHGAAPHAPVGSIP 411
Query: 305 SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPD 364
+ L ++ P + +G +IGKGG I IRQ SG+ I +++ DN +E ++T+T + +
Sbjct: 412 GQPLTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPTDNSNERLVTITGTQECN 471
Query: 365 DIKSMAVEAVLLLQTKINDE 384
+ A+ +L +++ E
Sbjct: 472 QM------ALYMLYSRLESE 485
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 34/52 (65%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTI 86
+ + +I P+ ++G++IGK G IN IRQ + + +K+ +P + +R+VTI
Sbjct: 413 QPLTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPTDNSNERLVTI 464
>gi|12230430|sp|P57724.1|PCBP4_MOUSE RecName: Full=Poly(rC)-binding protein 4; AltName: Full=Alpha-CP4
gi|9957163|gb|AAG09239.1|AF176328_1 alphaCP-4 [Mus musculus]
Length = 403
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 92/336 (27%), Positives = 157/336 (46%), Gaps = 52/336 (15%)
Query: 301 GASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAI 360
G S L +R+L ++G +IGK G T+K IR+ S A+I + + + E + T+T
Sbjct: 11 GPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE--GSCPERITTITGS 68
Query: 361 ESPDDIKSMAVEAVLLLQTKINDED------------DDTVTIRLLVSSKVIGCIIGKSG 408
+ AV ++ K+ DED VT+RL++ + G +IGK+G
Sbjct: 69 ------TAAVFHAVSMIAFKL-DEDLCAAPANGGSVSRPPVTLRLVIPASQCGSLIGKAG 121
Query: 409 SIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDR 468
+ I EIR+ T A V+++ P ++ + V V G V DA++ + ++ L+
Sbjct: 122 TKIKEIRETTGAQVQVAGDLLP---NSTERAVTVSG----VPDAIILCVRQICAVILE-- 172
Query: 469 DGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGS 528
+PP GA Y +S+ +L L +Q G ++ + +
Sbjct: 173 ----SPPKGATIPYHPS--LSLGTVL--------LSANQGFSVQGQYGAVTPAEVTKLQQ 218
Query: 529 LSMGDSPYGSMSSYSSKLYGGLPPPL---TLEVLVPANAVGKVIGKAGSNLANIRKISGA 585
LS P+ S S + G+ P + E LVP + +G VIG+ GS ++ IR++SGA
Sbjct: 219 LSGHAVPFASPS-----VVPGMDPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGA 273
Query: 586 TIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFI 621
I++ + G+R I+G+P A+ LI A +
Sbjct: 274 HIKIGNQAEGAGERHVTITGSPVSIALAQYLITACL 309
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 137/332 (41%), Gaps = 51/332 (15%)
Query: 30 EKGNEESVIY--RILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIY 87
E+G E S+ R+L +GS+IGK G+ + IR+++ AR+ + + +R+ TI
Sbjct: 9 EEGPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTIT 66
Query: 88 SHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVP 147
F E LCAA + + ++++P
Sbjct: 67 GSTAAVFHAVSMIAFKLDEDLCAA-----------------PANGGSVSRPPVTLRLVIP 109
Query: 148 SSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKA 207
+SQ ++IGKAG IK +R T ++V T + V +SG +A+
Sbjct: 110 ASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNST-------ERAVTVSGVPDAIILC 162
Query: 208 LFAISAIMYKFSPR-EDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPS 266
+ I A++ + P+ IP ++ ++ S + G Y P
Sbjct: 163 VRQICAVILESPPKGATIPYHPSLSLG---TVLLSANQGFSVQGQYGAVTP--------- 210
Query: 267 ILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKG 326
A V LQ +G+ P S S+V G+ ++Q+ L P + IG VIG+
Sbjct: 211 ----AEVTKLQQL--SGHAVPFASP--SVVPGMDPSTQTSSQ--EFLVPNDLIGCVIGRQ 260
Query: 327 GGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
G I IRQ SGA I + + + E +T+T
Sbjct: 261 GSKISEIRQMSGAHIKIGNQAEGAGERHVTIT 292
>gi|194762728|ref|XP_001963486.1| GF20264 [Drosophila ananassae]
gi|190629145|gb|EDV44562.1| GF20264 [Drosophila ananassae]
Length = 590
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 152/333 (45%), Gaps = 49/333 (14%)
Query: 298 GLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITV 357
G+ G + + +R+L +G +IG+ G TI++I Q S A++DV K+N ++
Sbjct: 75 GMPGPGRQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDV-HRKENVGSVEKSI 133
Query: 358 TAIESPDDIKSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKR 417
T +P++ + + ++Q + + + +++L + +IG IIGKSG+ I I +
Sbjct: 134 TIYGNPENCTNACKRILEVMQQEALSTNKGEICLKILAHNNLIGRIIGKSGNTIKRIMQD 193
Query: 418 TKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVG 477
T + +S + + + ++ V G + ++ A QI +LR D
Sbjct: 194 TDTKITVSSINDINSFNL-ERIITVKGLIENMSRAENQISTKLRQSYENDLQ-------- 244
Query: 478 ADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYG 537
+M P P + P+ S G GM+ ++S+ P+
Sbjct: 245 -----------AMAPQSLMFPGLHPMAM----MSTPGNGMVFNTSM-----------PFP 278
Query: 538 SMSSYS-SKLYGGLPPPL-------TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEM 589
S S++ SK + PP+ T + +P NAVG +IG GS++ +I + S A++++
Sbjct: 279 SCQSFAMSKTPASVVPPVFPNDLQETTFLYIPNNAVGAIIGTKGSHIRSIMRFSNASLKI 338
Query: 590 SDSKS-----SRGDRVALISGTPEQKRAAENLI 617
+ + + +R I GTPE + A+ +I
Sbjct: 339 APLDADKPLDQQTERKVTIVGTPEGQWKAQYMI 371
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 107/459 (23%), Positives = 198/459 (43%), Gaps = 75/459 (16%)
Query: 12 RDNDRDGKNQKRRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVK 71
++ R +NQ+ G + RIL ++G++IG+ G I +I Q++RARV
Sbjct: 60 KNQRRSQRNQRNPYPGMPGPGRQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVD 119
Query: 72 VV-DPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANAT 130
V G+ ++ +TIY + ++ + C +++ A N
Sbjct: 120 VHRKENVGSVEKSITIYGNPENCTNA------------CKRILEVMQQEALSTN------ 161
Query: 131 DNDKKRKEKEEC-QILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAM 189
+ E C +IL ++ IIGK+G TIKR+ T T I V S +
Sbjct: 162 -------KGEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITV-----SSINDINSF 209
Query: 190 EFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPG 249
+ + + G E + +A IS + + S D+ AP S++ P ++P
Sbjct: 210 NLERIITVKGLIENMSRAENQISTKLRQ-SYENDLQAM-----APQSLMFPG---LHPMA 260
Query: 250 GLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELV 309
+ + ++ + S+P P Q +A + T S+V + E
Sbjct: 261 MMSTPGNGMVFNTSMP-------FPSCQSFA-------MSKTPASVVPPVFPNDLQETTF 306
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQI-----DVDDTKDNRDECVITVTAIESPD 364
+ + P N +G +IG G I+SI + S A + D D D + E +T+ + +P+
Sbjct: 307 LYI--PNNAVGAIIGTKGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTI--VGTPE 362
Query: 365 DIKSMAVEAVLLLQTKINDE------DDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRT 418
+A ++ K+ +E DD +T+ LLV+S +G IIGK G + E+++ T
Sbjct: 363 G----QWKAQYMIFEKMREEGFMCGTDDVRLTVELLVASSQVGRIIGKGGQNVRELQRVT 418
Query: 419 KADVRISKGDKPKCADANDEL-VEVVGEVGSVRDALVQI 456
+ +++ + + ++E V ++G SV+ A +I
Sbjct: 419 GSVIKLPEHALAPPSGGDEETPVHIIGPFYSVQSAQRRI 457
>gi|397493518|ref|XP_003817651.1| PREDICTED: RNA-binding protein Nova-2 [Pan paniscus]
Length = 349
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 153/341 (44%), Gaps = 45/341 (13%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD-----NRDECVITVTAIE 361
E ++VL P G +IGKGG TI +++ +GA I + +KD C++ TA E
Sbjct: 5 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTA-E 63
Query: 362 SPDDIKSMAVEAVL-------------LLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSG 408
+ + + S E V +LQ + D +L+V + G IIGK G
Sbjct: 64 ALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGG 123
Query: 409 SIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDD----- 463
+ + + +++ A V++S+ KP+ + + +V V GE V A+ I+ ++++D
Sbjct: 124 ATVKAVMEQSGAWVQLSQ--KPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSS 181
Query: 464 ALKDRDGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSL 523
L + PV + P P P L A + + G+L + L
Sbjct: 182 CLNISYANVAGPVANSN----------PTGSPYASPADVLPAAAAASAAAASGLLGPAGL 231
Query: 524 YGYGSL-SMGDSPYGSMSSY--SSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIR 580
G G+ + G+ + + KL L +E+ VP N VG ++GK G L +
Sbjct: 232 AGVGAFPAXXXXXAGAAGGFLTAEKLAAESAKEL-VEIAVPENLVGAILGKGGKTLVEYQ 290
Query: 581 KISGATIEMSDS----KSSRGDRVALISGTPEQKRAAENLI 617
+++GA I++S +R RV I+G+P +AA+ LI
Sbjct: 291 ELTGARIQISKKGEFLPGTRNRRVT-ITGSPAATQAAQYLI 330
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 146/320 (45%), Gaps = 31/320 (9%)
Query: 34 EESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV---DPFPGAKDRVVTIYSHV 90
E ++L P GS+IGK G+ I +++ET A +K+ D +PG +RV +
Sbjct: 3 EGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQG-- 60
Query: 91 KDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQ 150
E + F E + A+ K + N + T + R + + +++VP+S
Sbjct: 61 -TAEALNAVHSF-IAEKVREIPQAMTKPE--VVNILQPQTTMNPDRAK--QAKLIVPNST 114
Query: 151 SANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFA 210
+ IIGK GAT+K + ++ ++++ K + V +SGE E V KA
Sbjct: 115 AGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQ------ERVVTVSGEPEQVHKA--- 165
Query: 211 ISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGA 270
+SAI+ K +ED P ++ + + P G Y + +LP+ + S A
Sbjct: 166 VSAIVQKV--QED-PQSSSCLNISYANVAGPVANSNPTGSPYASPADVLPAAAAASAAAA 222
Query: 271 ARVPDLQGYADTGNTWPVY------STGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIG 324
+ + G A G +P + G L + + A ++ELV + P N +G ++G
Sbjct: 223 SGLLGPAGLAGVG-AFPAXXXXXAGAAGGFLTAEKLAAESAKELV-EIAVPENLVGAILG 280
Query: 325 KGGGTIKSIRQASGAQIDVD 344
KGG T+ ++ +GA+I +
Sbjct: 281 KGGKTLVEYQELTGARIQIS 300
>gi|395832731|ref|XP_003789409.1| PREDICTED: poly(rC)-binding protein 4 [Otolemur garnettii]
Length = 403
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 155/329 (47%), Gaps = 52/329 (15%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
L +R+L ++G +IGK G T+K IR+ S A+I + + + E + T+T
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE--GSCPERITTITGS------T 69
Query: 368 SMAVEAVLLLQTKINDED------------DDTVTIRLLVSSKVIGCIIGKSGSIINEIR 415
+ AV ++ K+ DED VT+RL++ + G +IGK+G+ I EIR
Sbjct: 70 AAVFHAVSMIAFKL-DEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIR 128
Query: 416 KRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPP 475
+ T A V+++ P ++ + V V G V DA++ + ++ L+ +PP
Sbjct: 129 ETTGAQVQVAGDLLP---NSTERAVTVSG----VPDAIILCVRQICAVILE------SPP 175
Query: 476 VGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSP 535
GA Y +S+ +L L +Q G ++ + + LS P
Sbjct: 176 KGATIPYHPS--LSLGTVL--------LSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVP 225
Query: 536 YGSMSSYSSKLYGGLPPPL---TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDS 592
+ S S + GL P + E LVP + +G VIG+ GS ++ IR++SGA I++ +
Sbjct: 226 FASPS-----VVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQ 280
Query: 593 KSSRGDRVALISGTPEQKRAAENLIQAFI 621
G+R I+G+P A+ LI A +
Sbjct: 281 AEGAGERHVTITGSPVSIALAQYLITACL 309
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 132/324 (40%), Gaps = 49/324 (15%)
Query: 36 SVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKED 95
++ R+L +GS+IGK G+ + IR+++ AR+ + + +R+ TI
Sbjct: 17 TLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGSTAAVFH 74
Query: 96 VEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANII 155
F E LCAA + + ++++P+SQ ++I
Sbjct: 75 AVSMIAFKLDEDLCAA-----------------PANGGNVSRPPVTLRLVIPASQCGSLI 117
Query: 156 GKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIM 215
GKAG IK +R T ++V T + V +SG +A+ + I A++
Sbjct: 118 GKAGTKIKEIRETTGAQVQVAGDLLPNST-------ERAVTVSGVPDAIILCVRQICAVI 170
Query: 216 YKFSPR-EDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVP 274
+ P+ IP ++ ++ S + G Y P A V
Sbjct: 171 LESPPKGATIPYHPSLSLG---TVLLSANQGFSVQGQYGAVTP-------------AEVT 214
Query: 275 DLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIR 334
LQ +G+ P S S+V GL +Q+ L P + IG VIG+ G I IR
Sbjct: 215 KLQQL--SGHAVPFASP--SVVPGLDPGTQTSSQ--EFLVPNDLIGCVIGRQGSKISEIR 268
Query: 335 QASGAQIDVDDTKDNRDECVITVT 358
Q SGA I + + + E +T+T
Sbjct: 269 QMSGAHIKIGNQAEGAGERHVTIT 292
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 384 EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVV 443
E T+T+R+L+ K +G IIGK G + IR+++ A + IS+G P + + +
Sbjct: 13 ELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCP------ERITTIT 66
Query: 444 GEVGSVRDALVQIILRLRDD 463
G +V A+ I +L +D
Sbjct: 67 GSTAAVFHAVSMIAFKLDED 86
>gi|440907813|gb|ELR57910.1| Poly(rC)-binding protein 1 [Bos grunniens mutus]
Length = 356
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 158/347 (45%), Gaps = 50/347 (14%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
L IR+L ++G +IGK G ++K IR+ SGA+I++ + N E +IT+T P +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIITLTG---PTNAI 68
Query: 368 SMAVEAVL-LLQTKINDEDDDT-------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
A ++ L+ IN ++ VT+RL+V + G +IGK G I EIR+ T
Sbjct: 69 FKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTG 128
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDG--------- 470
A V+++ P ++ + + + G SV + + QI L + + + G
Sbjct: 129 AQVQVAGDMLP---NSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQP 185
Query: 471 --SRNPPV---GADHI-----YSSGTG-ISMPPL-------LPSIPPVGPLGYDQRADSG 512
+ +P + G D Y T + PPL +I P+ +Q A
Sbjct: 186 MPASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISPLDLAKLNQVARQQ 245
Query: 513 SGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKA 572
S M+ + G+ + DS + Y + L T E+ +P N +G +IG+
Sbjct: 246 SHFAMMHGGT--GFAGI---DSSSPEVKGYWASLDAST--QTTHELTIPNNLIGCIIGRQ 298
Query: 573 GSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQA 619
GSN+ IR++SGA I++++ R I+G+ A+ LI A
Sbjct: 299 GSNINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLINA 345
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 82/366 (22%), Positives = 146/366 (39%), Gaps = 79/366 (21%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH 89
E G ++ R+L +GS+IGK G+ + IR+E+ AR+ + + +R++T
Sbjct: 7 ESGLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIIT---- 60
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAV-----ANATDNDKKRKEKEECQI 144
L +A+ K A I + + ++ T++ + ++
Sbjct: 61 ------------------LTGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRL 102
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAV 204
+VP++Q ++IGK G IK +R T ++V T + + I+G ++V
Sbjct: 103 VVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNST-------ERAITIAGVPQSV 155
Query: 205 KKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGL--------YPNAD 256
+ + I +M + + T+ P +P+ P+ GG YP+A
Sbjct: 156 TECVKQICLVMLETLSQSPQGRVMTIPYQP----MPASSPVICAGGQDRCSDAAGYPHAT 211
Query: 257 PIL--PSRSVPSILGAARVPDL---------------------QGYADTGNTWPVYSTGL 293
L P SI G + L G+A ++ P
Sbjct: 212 HDLEGPPLDAYSIQGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVK--- 268
Query: 294 SLVSGLVGASQ-SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDE 352
+ L ++Q + EL I P N IG +IG+ G I IRQ SGAQI + + +
Sbjct: 269 GYWASLDASTQTTHELTI----PNNLIGCIIGRQGSNINEIRQMSGAQIKIANPVEGSSG 324
Query: 353 CVITVT 358
+T+T
Sbjct: 325 RQVTIT 330
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 9/92 (9%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+TIRLL+ K +G IIGK G + IR+ + A + IS+G+ P + ++ + G
Sbjct: 13 TLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCP------ERIITLTGPTN 66
Query: 448 SVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
++ A II +L +D ++ + + PPV
Sbjct: 67 AIFKAFAMIIDKLEEDINSSMTNSTAASRPPV 98
>gi|226502036|ref|NP_001148766.1| nucleic acid binding protein [Zea mays]
gi|195621990|gb|ACG32825.1| nucleic acid binding protein [Zea mays]
Length = 441
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 100/184 (54%), Gaps = 17/184 (9%)
Query: 38 IYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVE 97
++R++ P +GS+IG+ G++I + + T+ARV++++ GA +R+V V KED
Sbjct: 41 VFRLVVPVLKVGSIIGRKGELIKRLVEGTKARVRILEGPVGATERIVL----VSGKEDPG 96
Query: 98 VDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEEC--QILVPSSQSANII 155
++ L A DAL++V + A + + C ++LVP +Q+ N+I
Sbjct: 97 LE--------LSPAMDALMRVFKRVIGITDGAAEGTQAAATPGVCAARLLVPGAQAINLI 148
Query: 156 GKAGATIKRLRSKTRTSIKVTPKDASE-PTHSCAMEFDNFVLISGESEAVKKALFAISAI 214
GK GATIK ++ T +I+V D E P + + + V I G++E V KAL A+S
Sbjct: 149 GKQGATIKAIQESTGATIRVISVDEHERPFY--VTDDERIVEIQGDTEKVLKALQAVSNH 206
Query: 215 MYKF 218
+ KF
Sbjct: 207 LRKF 210
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 146/343 (42%), Gaps = 41/343 (11%)
Query: 309 VIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKS 368
V R++ P K+G +IG+ G IK + + + A++ + + E ++ V+ E P S
Sbjct: 41 VFRLVVPVLKVGSIIGRKGELIKRLVEGTKARVRILEGPVGATERIVLVSGKEDPGLELS 100
Query: 369 MAVEAVLLLQTKINDEDDDTV------------TIRLLVSSKVIGCIIGKSGSIINEIRK 416
A++A++ + ++ D RLLV +IGK G+ I I++
Sbjct: 101 PAMDALMRVFKRVIGITDGAAEGTQAAATPGVCAARLLVPGAQAINLIGKQGATIKAIQE 160
Query: 417 RTKADVR---ISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLR----DDALKDRD 469
T A +R + + ++P ++ +VE+ G+ V AL + LR D ++
Sbjct: 161 STGATIRVISVDEHERPFYVTDDERIVEIQGDTEKVLKALQAVSNHLRKFLVDHSVLPLF 220
Query: 470 GSRNPPVGADHI--YSSGTGISMPPLLPSIPP------VGPLGYDQRADSGSGIGMLSSS 521
N V DH +S + S+ + PP + P+ D L
Sbjct: 221 EKTNTAVSQDHNVGWSDMSHPSIGSAQVNQPPSVVDEYILPVKRDTL--------YLERE 272
Query: 522 SLYGYGSLSMGDSPYGSMSSYSS----KLYGGLP--PPLTLEVLVPANAVGKVIGKAGSN 575
L + G S YG + S+ ++G P +T + +P +IG G+N
Sbjct: 273 PLLDHNIHRSGVSLYGRDPALSTLRPPGIHGAGPLLTQITQTMQIPLTYAEDIIGVKGAN 332
Query: 576 LANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQ 618
+A IR SGA + + +S S D I GT Q +AA+ LIQ
Sbjct: 333 IAYIRANSGAVVTIQESLGSPDDITVEIKGTSSQVQAAQQLIQ 375
>gi|198469242|ref|XP_001354960.2| GA14212 [Drosophila pseudoobscura pseudoobscura]
gi|198146781|gb|EAL32016.2| GA14212 [Drosophila pseudoobscura pseudoobscura]
Length = 521
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/347 (23%), Positives = 156/347 (44%), Gaps = 59/347 (17%)
Query: 284 NTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDV 343
NT+P G+ G + + +R+L +G +IG+ G TI++I Q S A++DV
Sbjct: 71 NTYP----------GMPGPGRQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDV 120
Query: 344 DDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCI 403
K+N ++T +P++ + + ++Q + + + +++L + +IG I
Sbjct: 121 -HRKENVGSLEKSITIYGNPENCTNACKRILEVMQQEALSTNKGEICLKILAHNNLIGRI 179
Query: 404 IGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDD 463
IGKSG+ I I + T + +S + + + ++ V G + ++ A QI +LR
Sbjct: 180 IGKSGNTIKRIMQDTDTKITVSSINDINSFNL-ERIITVKGLIENMSRAENQISTKLRQS 238
Query: 464 ALKDRDGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSL 523
D +M P P + P+ S G GM+ ++S+
Sbjct: 239 YENDLQ-------------------AMAPQSLMFPGLHPMAM----MSTPGNGMVFNTSM 275
Query: 524 YGYGSLSMGDSPYGSMSSYS-SKLYGGLPPPL-------TLEVLVPANAVGKVIGKAGSN 575
P+ S S++ SK + PP+ T + +P NAVG +IG GS+
Sbjct: 276 -----------PFPSCQSFAMSKTPASVVPPVFPNDLQETTYLYIPNNAVGAIIGTKGSH 324
Query: 576 LANIRKISGATIEMSDSKS-----SRGDRVALISGTPEQKRAAENLI 617
+ +I + S A+++++ + + +R I GTPE + A+ +I
Sbjct: 325 IRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGTPEGQWKAQYMI 371
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 105/453 (23%), Positives = 196/453 (43%), Gaps = 75/453 (16%)
Query: 12 RDNDRDGKNQKRRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVK 71
++ R +NQ+ G + RIL ++G++IG+ G I +I Q++RARV
Sbjct: 60 KNQRRSQRNQRNTYPGMPGPGRQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVD 119
Query: 72 VV-DPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANAT 130
V G+ ++ +TIY + ++ + C +++ A N
Sbjct: 120 VHRKENVGSLEKSITIYGNPENCTNA------------CKRILEVMQQEALSTN------ 161
Query: 131 DNDKKRKEKEEC-QILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAM 189
+ E C +IL ++ IIGK+G TIKR+ T T I V+ + +
Sbjct: 162 -------KGEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITVSSINDIN-----SF 209
Query: 190 EFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPG 249
+ + + G E + +A IS + + S D+ AP S++ P ++P
Sbjct: 210 NLERIITVKGLIENMSRAENQISTKLRQ-SYENDLQAM-----APQSLMFPG---LHPMA 260
Query: 250 GLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELV 309
+ + ++ + S+P P Q +A + T S+V + E
Sbjct: 261 MMSTPGNGMVFNTSMP-------FPSCQSFA-------MSKTPASVVPPVFPNDLQETTY 306
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQI-----DVDDTKDNRDECVITVTAIESPD 364
+ + P N +G +IG G I+SI + S A + D D D + E +T+ + +P+
Sbjct: 307 LYI--PNNAVGAIIGTKGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTI--VGTPE 362
Query: 365 DIKSMAVEAVLLLQTKINDE------DDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRT 418
+A ++ K+ +E DD +T+ LLV+S +G IIGK G + E+++ T
Sbjct: 363 G----QWKAQYMIFEKMREEGFMCGTDDVRLTVELLVASSQVGRIIGKGGQNVRELQRVT 418
Query: 419 KADVRISKGDKPKCADANDEL-VEVVGEVGSVR 450
+ +++ + A ++E V ++G SV+
Sbjct: 419 GSVIKLPEHALAPPAGGDEETPVHIIGPFYSVQ 451
Score = 38.5 bits (88), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 30/38 (78%)
Query: 554 LTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSD 591
LT+E+LV ++ VG++IGK G N+ +++++G+ I++ +
Sbjct: 389 LTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIKLPE 426
>gi|397521888|ref|XP_003831016.1| PREDICTED: poly(rC)-binding protein 1 [Pan paniscus]
Length = 455
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 157/347 (45%), Gaps = 50/347 (14%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
L IR+L ++G +IGK G ++K IR+ SGA+I++ + N E +IT+T P +
Sbjct: 113 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIITLTG---PTNAI 167
Query: 368 SMAVEAVL-LLQTKINDEDDDT-------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
A ++ L+ IN ++ VT+RL+V + G +IGK G I EIR+ T
Sbjct: 168 FKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTG 227
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGS-------- 471
A V+++ P ++ + + + G SV + + QI L + + + G
Sbjct: 228 AQVQVAGDMLP---NSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQP 284
Query: 472 --RNPPV----GADHI-----YSSGTG-ISMPPL-------LPSIPPVGPLGYDQRADSG 512
+ PV G D Y T + PPL +I P+ +Q A
Sbjct: 285 MPASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISPLDLAKLNQVARQQ 344
Query: 513 SGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKA 572
S M+ + G+ + DS + Y + L T E+ +P N +G +IG+
Sbjct: 345 SHFAMMHGGT--GFAGI---DSSSPEVKGYWASLDAST--QTTHELTIPNNLIGCIIGRQ 397
Query: 573 GSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQA 619
G+N+ IR++SGA I++++ R I+G+ A+ LI A
Sbjct: 398 GANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLINA 444
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 80/360 (22%), Positives = 144/360 (40%), Gaps = 79/360 (21%)
Query: 36 SVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKED 95
++ R+L +GS+IGK G+ + IR+E+ AR+ + + +R++T
Sbjct: 112 TLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIIT---------- 159
Query: 96 VEVDDEFNDKEPLCAAQDALLKVHAAIANAV-----ANATDNDKKRKEKEECQILVPSSQ 150
L +A+ K A I + + ++ T++ + +++VP++Q
Sbjct: 160 ------------LTGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQ 207
Query: 151 SANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFA 210
++IGK G IK +R T ++V T + + I+G ++V + +
Sbjct: 208 CGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNST-------ERAITIAGVPQSVTECVKQ 260
Query: 211 ISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGL--------YPNADPIL--P 260
I +M + + T+ P +P+ P+ GG YP+A L P
Sbjct: 261 ICLVMLETLSQSPQGRVMTIPYQP----MPASSPVICAGGQDRCSDAAGYPHATHDLEGP 316
Query: 261 SRSVPSILGAARVPDL---------------------QGYADTGNTWPVYSTGLSLVSGL 299
SI G + L G+A ++ P + L
Sbjct: 317 PLDAYSIQGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVK---GYWASL 373
Query: 300 VGASQ-SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
++Q + EL I P N IG +IG+ G I IRQ SGAQI + + + +T+T
Sbjct: 374 DASTQTTHELTI----PNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTIT 429
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 55/100 (55%), Gaps = 12/100 (12%)
Query: 383 DEDDD---TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDEL 439
DE+++ T+TIRLL+ K +G IIGK G + IR+ + A + IS+G+ P + +
Sbjct: 104 DEENELNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCP------ERI 157
Query: 440 VEVVGEVGSVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
+ + G ++ A II +L +D ++ + + PPV
Sbjct: 158 ITLTGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPV 197
>gi|392340090|ref|XP_002726454.2| PREDICTED: poly(rC)-binding protein 1, partial [Rattus norvegicus]
Length = 365
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 157/347 (45%), Gaps = 50/347 (14%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
L IR+L ++G +IGK G ++K IR+ SGA+I++ + N E +IT+T P +
Sbjct: 23 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIITLTG---PTNAI 77
Query: 368 SMAVEAVL-LLQTKINDEDDDT-------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
A ++ L+ IN ++ VT+RL+V + G +IGK G I EIR+ T
Sbjct: 78 FKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTG 137
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGS-------- 471
A V+++ P ++ + + + G SV + + QI L + + + G
Sbjct: 138 AQVQVAGDMLP---NSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQP 194
Query: 472 --RNPPV----GADHI-----YSSGTG-ISMPPL-------LPSIPPVGPLGYDQRADSG 512
+ PV G D Y T + PPL +I P+ +Q A
Sbjct: 195 MPASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISPLDLAKLNQVARQQ 254
Query: 513 SGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKA 572
S M+ + G+ + DS + Y + L T E+ +P N +G +IG+
Sbjct: 255 SHFAMMHGGT--GFAGI---DSSSPEVKGYWASLDAST--QTTHELTIPNNLIGCIIGRQ 307
Query: 573 GSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQA 619
G+N+ IR++SGA I++++ R I+G+ A+ LI A
Sbjct: 308 GANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLINA 354
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 83/371 (22%), Positives = 148/371 (39%), Gaps = 79/371 (21%)
Query: 25 INEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVV 84
+N E G ++ R+L +GS+IGK G+ + IR+E+ AR+ + + +R++
Sbjct: 11 VNRVTESGLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERII 68
Query: 85 TIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAV-----ANATDNDKKRKEK 139
T L +A+ K A I + + ++ T++ +
Sbjct: 69 T----------------------LTGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPP 106
Query: 140 EECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISG 199
+++VP++Q ++IGK G IK +R T ++V T + + I+G
Sbjct: 107 VTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNST-------ERAITIAG 159
Query: 200 ESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGL-------- 251
++V + + I +M + + T+ P +P+ P+ GG
Sbjct: 160 VPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQP----MPASSPVICAGGQDRCSDAAG 215
Query: 252 YPNADPIL--PSRSVPSILGAARVPDL---------------------QGYADTGNTWPV 288
YP+A L P SI G + L G+A ++ P
Sbjct: 216 YPHATHDLEGPPLDAYSIQGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPE 275
Query: 289 YSTGLSLVSGLVGASQ-SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTK 347
+ L ++Q + EL I P N IG +IG+ G I IRQ SGAQI + +
Sbjct: 276 VK---GYWASLDASTQTTHELTI----PNNLIGCIIGRQGANINEIRQMSGAQIKIANPV 328
Query: 348 DNRDECVITVT 358
+ +T+T
Sbjct: 329 EGSSGRQVTIT 339
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 9/92 (9%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+TIRLL+ K +G IIGK G + IR+ + A + IS+G+ P + ++ + G
Sbjct: 22 TLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCP------ERIITLTGPTN 75
Query: 448 SVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
++ A II +L +D ++ + + PPV
Sbjct: 76 AIFKAFAMIIDKLEEDINSSMTNSTAASRPPV 107
>gi|26346528|dbj|BAC36915.1| unnamed protein product [Mus musculus]
Length = 403
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 93/336 (27%), Positives = 156/336 (46%), Gaps = 52/336 (15%)
Query: 301 GASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAI 360
G S L +R+L ++G +IGK G T+K IR+ S A+I + + + E + T+T
Sbjct: 11 GPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE--GSCPERITTITGS 68
Query: 361 ESPDDIKSMAVEAVLLLQTKINDED------------DDTVTIRLLVSSKVIGCIIGKSG 408
+ AV ++ K+ DED VT+RL++ + G +IGK+G
Sbjct: 69 ------TAAVFHAVSMIAFKL-DEDLCAAPANGGSVSRPPVTLRLVIPASQCGSLIGKAG 121
Query: 409 SIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDR 468
+ I EIR+ T A V+++ P ++ + V V G V DA++ + ++ L
Sbjct: 122 TKIKEIRETTGAQVQVAGDLLP---NSTERAVTVSG----VPDAIILCVRQICAVILG-- 172
Query: 469 DGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGS 528
+PP GA Y +S+ +L L +Q G ++ + +
Sbjct: 173 ----SPPKGATIPYHPS--LSLGTVL--------LSANQGFSVQGQYGAVTPAEVTKLQQ 218
Query: 529 LSMGDSPYGSMSSYSSKLYGGLPPPL---TLEVLVPANAVGKVIGKAGSNLANIRKISGA 585
LS P+ S S + GL P + E LVP + +G VIG+ GS ++ IR++SGA
Sbjct: 219 LSGHAVPFASPS-----VVPGLDPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGA 273
Query: 586 TIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFI 621
I++ + G+R I+G+P A+ LI A +
Sbjct: 274 HIKIGNQAEGAGERHVTITGSPVSIALAQYLITACL 309
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 136/332 (40%), Gaps = 51/332 (15%)
Query: 30 EKGNEESVIY--RILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIY 87
E+G E S+ R+L +GS+IGK G+ + IR+++ AR+ + + +R+ TI
Sbjct: 9 EEGPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTIT 66
Query: 88 SHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVP 147
F E LCAA + + ++++P
Sbjct: 67 GSTAAVFHAVSMIAFKLDEDLCAA-----------------PANGGSVSRPPVTLRLVIP 109
Query: 148 SSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKA 207
+SQ ++IGKAG IK +R T ++V T + V +SG +A+
Sbjct: 110 ASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNST-------ERAVTVSGVPDAIILC 162
Query: 208 LFAISAIMYKFSPR-EDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPS 266
+ I A++ P+ IP ++ ++ S + G Y P
Sbjct: 163 VRQICAVILGSPPKGATIPYHPSLSLG---TVLLSANQGFSVQGQYGAVTP--------- 210
Query: 267 ILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKG 326
A V LQ +G+ P S S+V GL ++Q+ L P + IG VIG+
Sbjct: 211 ----AEVTKLQQL--SGHAVPFASP--SVVPGLDPSTQTSSQ--EFLVPNDLIGCVIGRQ 260
Query: 327 GGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
G I IRQ SGA I + + + E +T+T
Sbjct: 261 GSKISEIRQMSGAHIKIGNQAEGAGERHVTIT 292
>gi|226292229|gb|EEH47649.1| Poly(rC)-binding protein [Paracoccidioides brasiliensis Pb18]
Length = 495
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 163/366 (44%), Gaps = 66/366 (18%)
Query: 304 QSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESP 363
+S + IR + + IGKGG + IR+ SGA+ V D E ++TV+ ++
Sbjct: 133 ESGWIHIRAVISSAEAATCIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSGMQD- 191
Query: 364 DDIKSMAVEAVLLLQTKINDE--------DDDTVTIRLLVSSKVIGCIIGKSGSIINEIR 415
+A L+ +N+E T +RLL+ +IG IIGKSG I EI+
Sbjct: 192 -----AVAKAFGLIIRTLNNEPLEAPSTAQSKTYPLRLLIPHLLIGSIIGKSGVRIREIQ 246
Query: 416 KRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPP 475
+ + A + S P + + + ++G +V A + + L + L +R G P
Sbjct: 247 EASGARLNASDSCLPL---STERTLIILGVADAVHIATYYVAVTLVEQ-LTERFGG---P 299
Query: 476 VGADHIYSSGTG-------ISMPPLLPSIPPVGPLGY----------DQRADSGSGIGM- 517
+ + SG + + P +P P G G+ RA S G G+
Sbjct: 300 AASAYATRSGGPAGVVPGGMQVVPYIPQ-PAGGQYGHPDTFKRHQPQGTRAVSTGGYGVP 358
Query: 518 -----------------LSSSSLYGY-GSLSMGDSPYGS------MSSYSSKLYGGLPP- 552
+SS GY G+ SPYG+ + SS+ GG+ P
Sbjct: 359 YVHGQPGQPQMPQQALHYGASSRPGYTGAGPHQPSPYGAPQQSQVHGAPSSQPVGGVVPG 418
Query: 553 -PLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKR 611
P+T ++ +P + VG +IGK G+ + IR +SG+ I++++ + + +R+ I+GTPE +
Sbjct: 419 APVTQQIFIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQDNSNERLVTITGTPECNQ 478
Query: 612 AAENLI 617
A ++
Sbjct: 479 MALYML 484
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 32/50 (64%)
Query: 37 VIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTI 86
V +I P+ ++G++IGK G IN IR + + +K+ +P + +R+VTI
Sbjct: 421 VTQQIFIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQDNSNERLVTI 470
Score = 38.9 bits (89), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 303 SQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDT 346
+QS+ +R+L P IG +IGK G I+ I++ASGA+++ D+
Sbjct: 215 AQSKTYPLRLLIPHLLIGSIIGKSGVRIREIQEASGARLNASDS 258
>gi|426340771|ref|XP_004034301.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Gorilla gorilla
gorilla]
gi|426340773|ref|XP_004034302.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Gorilla gorilla
gorilla]
gi|426340775|ref|XP_004034303.1| PREDICTED: poly(rC)-binding protein 4 isoform 3 [Gorilla gorilla
gorilla]
Length = 403
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 155/329 (47%), Gaps = 52/329 (15%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
L +R+L ++G +IGK G T+K IR+ S A+I + + + E + T+T
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE--GSCPERITTITGS------T 69
Query: 368 SMAVEAVLLLQTKINDED------------DDTVTIRLLVSSKVIGCIIGKSGSIINEIR 415
+ AV ++ K+ DED VT+RL++ + G +IGK+G+ I EIR
Sbjct: 70 AAVFHAVSMIAFKL-DEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIR 128
Query: 416 KRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPP 475
+ T A V+++ P ++ + V V G V DA++ + ++ L+ +PP
Sbjct: 129 ETTGAQVQVAGDLLP---NSTERAVTVSG----VPDAIILCVRQICAVILE------SPP 175
Query: 476 VGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSP 535
GA Y +S+ +L L +Q G ++ + + LS P
Sbjct: 176 KGATIPYHPS--LSLGTVL--------LSANQGFSVQGQYGAVTPTEVTKLQQLSSHAVP 225
Query: 536 YGSMSSYSSKLYGGLPPPL---TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDS 592
+ + S + GL P + E LVP + +G VIG+ GS ++ IR++SGA I++ +
Sbjct: 226 FATPS-----VVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQ 280
Query: 593 KSSRGDRVALISGTPEQKRAAENLIQAFI 621
G+R I+G+P A+ LI A +
Sbjct: 281 AEGAGERHVTITGSPVSIALAQYLITACL 309
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 77/339 (22%), Positives = 133/339 (39%), Gaps = 79/339 (23%)
Query: 36 SVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKED 95
++ R+L +GS+IGK G+ + IR+++ AR+ + + +R+ TI
Sbjct: 17 TLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGSTAAVFH 74
Query: 96 VEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANII 155
F E LCAA + + ++++P+SQ ++I
Sbjct: 75 AVSMIAFKLDEDLCAA-----------------PANGGNVSRPPVTLRLVIPASQCGSLI 117
Query: 156 GKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIM 215
GKAG IK +R T ++V T + V +SG +A+ + I A++
Sbjct: 118 GKAGTKIKEIRETTGAQVQVAGDLLPNST-------ERAVTVSGVPDAIILCVRQICAVI 170
Query: 216 YKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPD 275
+ P+ + +P + PS S+ ++L +A
Sbjct: 171 LESPPKG------------------ATIPYH-------------PSLSLGTVLLSAN--- 196
Query: 276 LQGYADTGNTWPVYSTGL----------------SLVSGLVGASQSEELVIRVLCPFNKI 319
QG++ G V T + S+V GL +Q+ L P + I
Sbjct: 197 -QGFSVQGQYGAVTPTEVTKLQQLSSHAVPFATPSVVPGLDPGTQTSSQ--EFLVPNDLI 253
Query: 320 GRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
G VIG+ G I IRQ SGA I + + + E +T+T
Sbjct: 254 GCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTIT 292
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 384 EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVV 443
E T+T+R+L+ K +G IIGK G + IR+++ A + IS+G P + + +
Sbjct: 13 ELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCP------ERITTIT 66
Query: 444 GEVGSVRDALVQIILRLRDD 463
G +V A+ I +L +D
Sbjct: 67 GSTAAVFHAVSMIAFKLDED 86
>gi|413955216|gb|AFW87865.1| nucleic acid binding protein [Zea mays]
Length = 441
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 100/184 (54%), Gaps = 17/184 (9%)
Query: 38 IYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVE 97
++R++ P +GS+IG+ G++I + + T+ARV++++ GA +R+V V KED
Sbjct: 41 VFRLVVPVLKVGSIIGRKGELIKRLVEGTKARVRILEGPVGATERIVL----VSGKEDPG 96
Query: 98 VDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEEC--QILVPSSQSANII 155
++ L A DAL++V + A + + C ++LVP +Q+ N+I
Sbjct: 97 LE--------LSPAMDALMRVFKRVIGITDGAAEGTQAAATPGVCAARLLVPGAQAINLI 148
Query: 156 GKAGATIKRLRSKTRTSIKVTPKDASE-PTHSCAMEFDNFVLISGESEAVKKALFAISAI 214
GK GATIK ++ T +I+V D E P + + + V I G++E V KAL A+S
Sbjct: 149 GKQGATIKAIQESTGATIRVISVDEHERPFY--VTDDERIVEIQGDTEKVLKALQAVSNH 206
Query: 215 MYKF 218
+ KF
Sbjct: 207 LRKF 210
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 147/343 (42%), Gaps = 41/343 (11%)
Query: 309 VIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKS 368
V R++ P K+G +IG+ G IK + + + A++ + + E ++ V+ E P S
Sbjct: 41 VFRLVVPVLKVGSIIGRKGELIKRLVEGTKARVRILEGPVGATERIVLVSGKEDPGLELS 100
Query: 369 MAVEAVLLLQTKINDEDDDTV------------TIRLLVSSKVIGCIIGKSGSIINEIRK 416
A++A++ + ++ D RLLV +IGK G+ I I++
Sbjct: 101 PAMDALMRVFKRVIGITDGAAEGTQAAATPGVCAARLLVPGAQAINLIGKQGATIKAIQE 160
Query: 417 RTKADVR---ISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLR----DDALKDRD 469
T A +R + + ++P ++ +VE+ G+ V AL + LR D ++
Sbjct: 161 STGATIRVISVDEHERPFYVTDDERIVEIQGDTEKVLKALQAVSNHLRKFLVDHSVLPLF 220
Query: 470 GSRNPPVGADHI--YSSGTGISMPPLLPSIPP------VGPLGYDQRADSGSGIGMLSSS 521
N V DH +S + S+ + PP + P+ D L
Sbjct: 221 EKTNTAVSQDHNVGWSDMSHPSIGSAQVNQPPSVVDEYILPVKRDTL--------YLERE 272
Query: 522 SLYGYGSLSMGDSPYGSMSSYSS----KLYGGLP--PPLTLEVLVPANAVGKVIGKAGSN 575
+L + G S YG + S+ ++G P +T + +P +IG G+N
Sbjct: 273 TLLDHNIHRSGVSLYGRDPALSTLRPPGIHGAGPLLTQITQTMQIPLTYAEDIIGVKGAN 332
Query: 576 LANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQ 618
+A IR SGA + + +S S D I GT Q +AA+ LIQ
Sbjct: 333 IAYIRANSGAVVTIQESLGSPDDITVEIKGTSSQVQAAQQLIQ 375
>gi|14670369|ref|NP_127501.1| poly(rC)-binding protein 4 isoform c [Homo sapiens]
gi|14670373|ref|NP_127503.1| poly(rC)-binding protein 4 isoform c [Homo sapiens]
gi|291575148|ref|NP_001167571.1| poly(rC)-binding protein 4 isoform c [Homo sapiens]
gi|114587184|ref|XP_001170982.1| PREDICTED: poly(rC)-binding protein 4 isoform 12 [Pan troglodytes]
gi|114587188|ref|XP_001171026.1| PREDICTED: poly(rC)-binding protein 4 isoform 14 [Pan troglodytes]
gi|410037040|ref|XP_003950173.1| PREDICTED: poly(rC)-binding protein 4 [Pan troglodytes]
gi|12230429|sp|P57723.1|PCBP4_HUMAN RecName: Full=Poly(rC)-binding protein 4; AltName: Full=Alpha-CP4
gi|9957167|gb|AAG09241.1|AF176330_1 alphaCP-4 [Homo sapiens]
gi|10436225|dbj|BAB14761.1| unnamed protein product [Homo sapiens]
gi|12804299|gb|AAH03008.1| Poly(rC) binding protein 4 [Homo sapiens]
gi|13278756|gb|AAH04153.1| Poly(rC) binding protein 4 [Homo sapiens]
gi|119585571|gb|EAW65167.1| poly(rC) binding protein 4, isoform CRA_c [Homo sapiens]
gi|119585572|gb|EAW65168.1| poly(rC) binding protein 4, isoform CRA_c [Homo sapiens]
gi|119585573|gb|EAW65169.1| poly(rC) binding protein 4, isoform CRA_c [Homo sapiens]
gi|119585576|gb|EAW65172.1| poly(rC) binding protein 4, isoform CRA_c [Homo sapiens]
gi|119585577|gb|EAW65173.1| poly(rC) binding protein 4, isoform CRA_c [Homo sapiens]
gi|261861404|dbj|BAI47224.1| poly(rC) binding protein 4 [synthetic construct]
gi|410227440|gb|JAA10939.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410227442|gb|JAA10940.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410227444|gb|JAA10941.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410262892|gb|JAA19412.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410262894|gb|JAA19413.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410262896|gb|JAA19414.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410301312|gb|JAA29256.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410301314|gb|JAA29257.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410350315|gb|JAA41761.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410350319|gb|JAA41763.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410350321|gb|JAA41764.1| poly(rC) binding protein 4 [Pan troglodytes]
Length = 403
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 155/329 (47%), Gaps = 52/329 (15%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
L +R+L ++G +IGK G T+K IR+ S A+I + + + E + T+T
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE--GSCPERITTITGS------T 69
Query: 368 SMAVEAVLLLQTKINDED------------DDTVTIRLLVSSKVIGCIIGKSGSIINEIR 415
+ AV ++ K+ DED VT+RL++ + G +IGK+G+ I EIR
Sbjct: 70 AAVFHAVSMIAFKL-DEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIR 128
Query: 416 KRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPP 475
+ T A V+++ P ++ + V V G V DA++ + ++ L+ +PP
Sbjct: 129 ETTGAQVQVAGDLLP---NSTERAVTVSG----VPDAIILCVRQICAVILE------SPP 175
Query: 476 VGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSP 535
GA Y +S+ +L L +Q G ++ + + LS P
Sbjct: 176 KGATIPYHPS--LSLGTVL--------LSANQGFSVQGQYGAVTPAEVTKLQQLSSHAVP 225
Query: 536 YGSMSSYSSKLYGGLPPPL---TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDS 592
+ + S + GL P + E LVP + +G VIG+ GS ++ IR++SGA I++ +
Sbjct: 226 FATPS-----VVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQ 280
Query: 593 KSSRGDRVALISGTPEQKRAAENLIQAFI 621
G+R I+G+P A+ LI A +
Sbjct: 281 AEGAGERHVTITGSPVSIALAQYLITACL 309
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 133/339 (39%), Gaps = 79/339 (23%)
Query: 36 SVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKED 95
++ R+L +GS+IGK G+ + IR+++ AR+ + + +R+ TI
Sbjct: 17 TLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGSTAAVFH 74
Query: 96 VEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANII 155
F E LCAA + + ++++P+SQ ++I
Sbjct: 75 AVSMIAFKLDEDLCAA-----------------PANGGNVSRPPVTLRLVIPASQCGSLI 117
Query: 156 GKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIM 215
GKAG IK +R T ++V T + V +SG +A+ + I A++
Sbjct: 118 GKAGTKIKEIRETTGAQVQVAGDLLPNST-------ERAVTVSGVPDAIILCVRQICAVI 170
Query: 216 YKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPD 275
+ P+ + +P + PS S+ ++L +A
Sbjct: 171 LESPPKG------------------ATIPYH-------------PSLSLGTVLLSAN--- 196
Query: 276 LQGYA---DTGNTWPVYSTGL-------------SLVSGLVGASQSEELVIRVLCPFNKI 319
QG++ G P T L S+V GL +Q+ L P + I
Sbjct: 197 -QGFSVQGQYGAVTPAEVTKLQQLSSHAVPFATPSVVPGLDPGTQTSSQ--EFLVPNDLI 253
Query: 320 GRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
G VIG+ G I IRQ SGA I + + + E +T+T
Sbjct: 254 GCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTIT 292
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 384 EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVV 443
E T+T+R+L+ K +G IIGK G + IR+++ A + IS+G P + + +
Sbjct: 13 ELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCP------ERITTIT 66
Query: 444 GEVGSVRDALVQIILRLRDD 463
G +V A+ I +L +D
Sbjct: 67 GSTAAVFHAVSMIAFKLDED 86
>gi|296225349|ref|XP_002758447.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Callithrix
jacchus]
gi|296225353|ref|XP_002758449.1| PREDICTED: poly(rC)-binding protein 4 isoform 3 [Callithrix
jacchus]
gi|297671175|ref|XP_002813714.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Pongo abelii]
gi|297671177|ref|XP_002813715.1| PREDICTED: poly(rC)-binding protein 4 isoform 3 [Pongo abelii]
gi|395733705|ref|XP_003776278.1| PREDICTED: poly(rC)-binding protein 4 [Pongo abelii]
Length = 403
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 155/329 (47%), Gaps = 52/329 (15%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
L +R+L ++G +IGK G T+K IR+ S A+I + + + E + T+T
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE--GSCPERITTITGS------T 69
Query: 368 SMAVEAVLLLQTKINDED------------DDTVTIRLLVSSKVIGCIIGKSGSIINEIR 415
+ AV ++ K+ DED VT+RL++ + G +IGK+G+ I EIR
Sbjct: 70 AAVFHAVSMIAFKL-DEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIR 128
Query: 416 KRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPP 475
+ T A V+++ P ++ + V V G V DA++ + ++ L+ +PP
Sbjct: 129 ETTGAQVQVAGDLLP---NSTERAVTVSG----VPDAIILCVRQICAVILE------SPP 175
Query: 476 VGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSP 535
GA Y +S+ +L L +Q G ++ + + LS P
Sbjct: 176 KGATIPYHPS--LSLGTVL--------LSANQGFSVQGQYGAVTPAEVTKLQQLSSHAVP 225
Query: 536 YGSMSSYSSKLYGGLPPPL---TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDS 592
+ + S + GL P + E LVP + +G VIG+ GS ++ IR++SGA I++ +
Sbjct: 226 FATPS-----VVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQ 280
Query: 593 KSSRGDRVALISGTPEQKRAAENLIQAFI 621
G+R I+G+P A+ LI A +
Sbjct: 281 AEGAGERHVTITGSPVSIALAQYLITACL 309
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 133/339 (39%), Gaps = 79/339 (23%)
Query: 36 SVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKED 95
++ R+L +GS+IGK G+ + IR+++ AR+ + + +R+ TI
Sbjct: 17 TLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGSTAAVFH 74
Query: 96 VEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANII 155
F E LCAA + + ++++P+SQ ++I
Sbjct: 75 AVSMIAFKLDEDLCAA-----------------PANGGNVSRPPVTLRLVIPASQCGSLI 117
Query: 156 GKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIM 215
GKAG IK +R T ++V T + V +SG +A+ + I A++
Sbjct: 118 GKAGTKIKEIRETTGAQVQVAGDLLPNST-------ERAVTVSGVPDAIILCVRQICAVI 170
Query: 216 YKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPD 275
+ P+ + +P + PS S+ ++L +A
Sbjct: 171 LESPPKG------------------ATIPYH-------------PSLSLGTVLLSAN--- 196
Query: 276 LQGYA---DTGNTWPVYSTGL-------------SLVSGLVGASQSEELVIRVLCPFNKI 319
QG++ G P T L S+V GL +Q+ L P + I
Sbjct: 197 -QGFSVQGQYGAVTPAEVTKLQQLSSHAVPFATPSVVPGLDPGTQTSSQ--EFLVPNDLI 253
Query: 320 GRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
G VIG+ G I IRQ SGA I + + + E +T+T
Sbjct: 254 GCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTIT 292
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 384 EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVV 443
E T+T+R+L+ K +G IIGK G + IR+++ A + IS+G P + + +
Sbjct: 13 ELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCP------ERITTIT 66
Query: 444 GEVGSVRDALVQIILRLRDD 463
G +V A+ I +L +D
Sbjct: 67 GSTAAVFHAVSMIAFKLDED 86
>gi|295673384|ref|XP_002797238.1| Poly(rC)-binding protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226282610|gb|EEH38176.1| Poly(rC)-binding protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 495
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 163/366 (44%), Gaps = 66/366 (18%)
Query: 304 QSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESP 363
+S + IR + + IGKGG + IR+ SGA+ V D E ++TV+ ++
Sbjct: 133 ESGWIHIRAVISSAEAATCIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSGMQD- 191
Query: 364 DDIKSMAVEAVLLLQTKINDE--------DDDTVTIRLLVSSKVIGCIIGKSGSIINEIR 415
+A L+ +N+E T +RLL+ +IG IIGKSG I EI+
Sbjct: 192 -----AVAKAFGLIIRTLNNEPLEAPSTAQSKTYPLRLLIPHLLIGSIIGKSGVRIREIQ 246
Query: 416 KRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPP 475
+ + A + S P + + + ++G +V A + + L + L +R G P
Sbjct: 247 EASGARLNASDSCLPL---STERTLIILGVADAVHIATYYVAVTLVEQ-LTERFGG---P 299
Query: 476 VGADHIYSSGTG-------ISMPPLLPSIPPVGPLGY----------DQRADSGSGIGM- 517
+ + SG + + P +P P G G+ RA S G G+
Sbjct: 300 AASAYATRSGGPAGVVPGGMQVVPYIPQ-PAGGQYGHPDTFKRHQPQGTRAVSTGGYGVP 358
Query: 518 -----------------LSSSSLYGY-GSLSMGDSPYGS------MSSYSSKLYGGLPP- 552
+SS GY G+ SPYG+ + SS+ GG+ P
Sbjct: 359 YVHGQPGQPQMPQQALHYGASSRPGYTGAGPHQPSPYGAPQPGQVHGAPSSQPVGGVVPG 418
Query: 553 -PLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKR 611
P+T ++ +P + VG +IGK G+ + IR +SG+ I++++ + + +R+ I+GTPE +
Sbjct: 419 APVTQQIFIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQDNSNERLVTITGTPECNQ 478
Query: 612 AAENLI 617
A ++
Sbjct: 479 MALYML 484
Score = 40.0 bits (92), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 32/50 (64%)
Query: 37 VIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTI 86
V +I P+ ++G++IGK G IN IR + + +K+ +P + +R+VTI
Sbjct: 421 VTQQIFIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQDNSNERLVTI 470
Score = 38.9 bits (89), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 303 SQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDT 346
+QS+ +R+L P IG +IGK G I+ I++ASGA+++ D+
Sbjct: 215 AQSKTYPLRLLIPHLLIGSIIGKSGVRIREIQEASGARLNASDS 258
>gi|225681071|gb|EEH19355.1| Poly(rC)-binding protein [Paracoccidioides brasiliensis Pb03]
Length = 495
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 163/366 (44%), Gaps = 66/366 (18%)
Query: 304 QSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESP 363
+S + IR + + IGKGG + IR+ SGA+ V D E ++TV+ ++
Sbjct: 133 ESGWIHIRAVISSAEAATCIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSGMQD- 191
Query: 364 DDIKSMAVEAVLLLQTKINDE--------DDDTVTIRLLVSSKVIGCIIGKSGSIINEIR 415
+A L+ +N+E T +RLL+ +IG IIGKSG I EI+
Sbjct: 192 -----AVAKAFGLIIRTLNNEPLEAPSTAQSKTYPLRLLIPHLLIGSIIGKSGVRIREIQ 246
Query: 416 KRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPP 475
+ + A + S P + + + ++G +V A + + L + L +R G P
Sbjct: 247 EASGARLNASDSCLPL---STERTLIILGVADAVHIATYYVAVTLVEQ-LTERFGG---P 299
Query: 476 VGADHIYSSGTG-------ISMPPLLPSIPPVGPLGY----------DQRADSGSGIGM- 517
+ + SG + + P +P P G G+ RA S G G+
Sbjct: 300 AASAYATRSGGPAGVVPGGMQVVPYIPQ-PAGGQYGHPDTFKRHQPQGTRAVSTGGYGVP 358
Query: 518 -----------------LSSSSLYGY-GSLSMGDSPYGS------MSSYSSKLYGGLPP- 552
+SS GY G+ SPYG+ + SS+ GG+ P
Sbjct: 359 YVHGQPGQPQMPQQALHYGASSRPGYTGAGPHQPSPYGAPQPSQVHGAPSSQPVGGVVPG 418
Query: 553 -PLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKR 611
P+T ++ +P + VG +IGK G+ + IR +SG+ I++++ + + +R+ I+GTPE +
Sbjct: 419 APVTQQIFIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQDNSNERLVTITGTPECNQ 478
Query: 612 AAENLI 617
A ++
Sbjct: 479 MALYML 484
Score = 40.0 bits (92), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 32/50 (64%)
Query: 37 VIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTI 86
V +I P+ ++G++IGK G IN IR + + +K+ +P + +R+VTI
Sbjct: 421 VTQQIFIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQDNSNERLVTI 470
Score = 38.9 bits (89), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 303 SQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDT 346
+QS+ +R+L P IG +IGK G I+ I++ASGA+++ D+
Sbjct: 215 AQSKTYPLRLLIPHLLIGSIIGKSGVRIREIQEASGARLNASDS 258
>gi|359479585|ref|XP_002275698.2| PREDICTED: uncharacterized protein LOC100266515 [Vitis vinifera]
Length = 858
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 97/210 (46%), Gaps = 26/210 (12%)
Query: 269 GAARVPDLQGYADT---GNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGK 325
G P+ QG D G WP G G E V R+L P K+G +IG+
Sbjct: 13 GNCHPPEKQGLNDGSGGGEKWP----------GWPG-----ENVFRMLIPVQKVGYIIGR 57
Query: 326 GGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKINDED 385
G IK + + + A+I + D E + V+A E PD + A++ +L + I D +
Sbjct: 58 KGEHIKKLSEETKARIKILDGPPGTSERAVMVSAKEEPDAPIAPAIDGLLRVHKCIMDVE 117
Query: 386 DDT-------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDE 438
D V+ RLLV + G +IGK G+ I I++ + VR+ + P A ND
Sbjct: 118 SDVPSAAGVMVSTRLLVVAAQAGSLIGKQGATIKSIQEASNCIVRVLGENLPLFALQNDT 177
Query: 439 LVEVVGEVGSVRDALVQIILRLRDDALKDR 468
+VE+ GE SV A+ I LR L DR
Sbjct: 178 VVEIQGEPASVHKAVELIASNLR-KFLVDR 206
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 95/181 (52%), Gaps = 19/181 (10%)
Query: 38 IYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVE 97
++R+L P +G +IG+ G+ I + +ET+AR+K++D PG +R V + + K++ D
Sbjct: 41 VFRMLIPVQKVGYIIGRKGEHIKKLSEETKARIKILDGPPGTSERAVMVSA--KEEPDA- 97
Query: 98 VDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGK 157
P+ A D LL+VH I + +D ++LV ++Q+ ++IGK
Sbjct: 98 ---------PIAPAIDGLLRVHKCIMDV---ESDVPSAAGVMVSTRLLVVAAQAGSLIGK 145
Query: 158 AGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYK 217
GATIK ++ + ++V E A++ D V I GE +V KA+ I++ + K
Sbjct: 146 QGATIKSIQEASNCIVRVL----GENLPLFALQNDTVVEIQGEPASVHKAVELIASNLRK 201
Query: 218 F 218
F
Sbjct: 202 F 202
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%)
Query: 554 LTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAA 613
+T + VP + VIG +G N++ +R+ SGATI + ++K G+ I+G+ Q + A
Sbjct: 733 ITQYMQVPLSYADAVIGASGVNISYVRRTSGATIAIEETKGVPGEMTVEINGSVSQVQTA 792
Query: 614 ENLIQAFI 621
+ LIQ F+
Sbjct: 793 QQLIQNFM 800
>gi|291393785|ref|XP_002713277.1| PREDICTED: poly(rC) binding protein 4 [Oryctolagus cuniculus]
Length = 403
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 155/329 (47%), Gaps = 52/329 (15%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
L +R+L ++G +IGK G T+K IR+ S A+I + + + E + T+T
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE--GSCPERITTITGS------T 69
Query: 368 SMAVEAVLLLQTKINDED------------DDTVTIRLLVSSKVIGCIIGKSGSIINEIR 415
+ AV ++ K+ DED VT+RL++ + G +IGK+G+ I EIR
Sbjct: 70 AAVFHAVSMIAFKL-DEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIR 128
Query: 416 KRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPP 475
+ T A V+++ P ++ + V V G V DA++ + ++ L+ +PP
Sbjct: 129 ETTGAQVQVAGDLLP---NSTERAVTVSG----VPDAIILCVRQICAVILE------SPP 175
Query: 476 VGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSP 535
GA Y +S+ +L L +Q G ++ + + LS P
Sbjct: 176 KGATIPYHPS--LSLGTVL--------LSANQGFPVQGQYGAVTPAEVTKLQQLSGHAVP 225
Query: 536 YGSMSSYSSKLYGGLPPPL---TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDS 592
+ S S + GL P + E LVP + +G VIG+ GS ++ IR++SGA I++ +
Sbjct: 226 FASPS-----VVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQ 280
Query: 593 KSSRGDRVALISGTPEQKRAAENLIQAFI 621
G+R I+G+P A+ LI A +
Sbjct: 281 AEGAGERHVTITGSPVSIALAQYLITACL 309
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 133/324 (41%), Gaps = 49/324 (15%)
Query: 36 SVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKED 95
++ R+L +GS+IGK G+ + IR+++ AR+ + + +R+ TI
Sbjct: 17 TLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGSTAAVFH 74
Query: 96 VEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANII 155
F E LCAA + + ++++P+SQ ++I
Sbjct: 75 AVSMIAFKLDEDLCAA-----------------PANGGNVSRPPVTLRLVIPASQCGSLI 117
Query: 156 GKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIM 215
GKAG IK +R T ++V T + V +SG +A+ + I A++
Sbjct: 118 GKAGTKIKEIRETTGAQVQVAGDLLPNST-------ERAVTVSGVPDAIILCVRQICAVI 170
Query: 216 YKFSPR-EDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVP 274
+ P+ IP ++ ++ S +P G Y P A V
Sbjct: 171 LESPPKGATIPYHPSLSLG---TVLLSANQGFPVQGQYGAVTP-------------AEVT 214
Query: 275 DLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIR 334
LQ +G+ P S S+V GL +Q+ L P + IG VIG+ G I IR
Sbjct: 215 KLQQL--SGHAVPFASP--SVVPGLDPGTQTSSQ--EFLVPNDLIGCVIGRQGSKISEIR 268
Query: 335 QASGAQIDVDDTKDNRDECVITVT 358
Q SGA I + + + E +T+T
Sbjct: 269 QMSGAHIKIGNQAEGAGERHVTIT 292
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 384 EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVV 443
E T+T+R+L+ K +G IIGK G + IR+++ A + IS+G P + + +
Sbjct: 13 ELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCP------ERITTIT 66
Query: 444 GEVGSVRDALVQIILRLRDD 463
G +V A+ I +L +D
Sbjct: 67 GSTAAVFHAVSMIAFKLDED 86
>gi|41055221|ref|NP_957486.1| poly(rC)-binding protein 2 [Danio rerio]
gi|28279638|gb|AAH45508.1| Poly(rC) binding protein 2 [Danio rerio]
gi|37681899|gb|AAQ97827.1| poly(rC) binding protein 2 [Danio rerio]
gi|42744604|gb|AAH66603.1| Pcbp2 protein [Danio rerio]
Length = 318
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 87/338 (25%), Positives = 157/338 (46%), Gaps = 49/338 (14%)
Query: 297 SGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVIT 356
SG++ + L IR+L ++G +IGK G ++K +R+ SGA+I++ + N E +IT
Sbjct: 3 SGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIIT 60
Query: 357 V----TAIESPDDIKSMAVEAVLLLQTKINDEDDDT-------VTIRLLVSSKVIGCIIG 405
+ TAI SM +E L+ I+ ++ VT+R++V + G +IG
Sbjct: 61 LAGPTTAI---FKAFSMIIEK---LEEDISSSMSNSTATSKPPVTLRIVVPASQCGSLIG 114
Query: 406 KSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDAL 465
K G I EIR+ T A V+++ P ++ + + + G S+ + + QI + + +
Sbjct: 115 KGGCKIKEIRESTGAQVQVAGDMLP---NSTERAITIAGTPLSIIECVKQICVVMLESPP 171
Query: 466 KDRDGSRNP-PVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLY 524
K P P G+ I++ G +A + G + L
Sbjct: 172 KGVTIPYRPKPSGSPVIFAGG----------------------QAYAVQGQHAIPQPDLT 209
Query: 525 GYGSLSMGDSPYGSMSSYSSKLYGGLPPPL---TLEVLVPANAVGKVIGKAGSNLANIRK 581
L+M SP+ ++ S G+ + E+ +P + +G +IG+ G+ + IR+
Sbjct: 210 KLHQLAMQQSPF-PLAPSSQGFTAGMDASAQTGSHELTIPNDLIGCIIGRQGAKINEIRQ 268
Query: 582 ISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQA 619
+SGA I++++ DR I+G+P AE LI A
Sbjct: 269 MSGAQIKIANPVEGSSDRQVTITGSPASISLAEYLINA 306
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 82/342 (23%), Positives = 149/342 (43%), Gaps = 56/342 (16%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH 89
E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R++T+
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLAG- 63
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSS 149
+ F+ + K+ I+++++N+T K +I+VP+S
Sbjct: 64 ----PTTAIFKAFS---------MIIEKLEEDISSSMSNSTATSKP---PVTLRIVVPAS 107
Query: 150 QSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALF 209
Q ++IGK G IK +R T ++V T + + I+G ++ + +
Sbjct: 108 QCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNST-------ERAITIAGTPLSIIECVK 160
Query: 210 AISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILG 269
I +M + P+ T+ P PS P+ GG A + ++P
Sbjct: 161 QICVVMLESPPK-----GVTIPYRPK----PSGSPVIFAGG---QAYAVQGQHAIPQ--- 205
Query: 270 AARVPD---LQGYADTGNTWPVYSTGLSLVSGLVGASQ--SEELVIRVLCPFNKIGRVIG 324
PD L A + +P+ + +G+ ++Q S EL I P + IG +IG
Sbjct: 206 ----PDLTKLHQLAMQQSPFPLAPSSQGFTAGMDASAQTGSHELTI----PNDLIGCIIG 257
Query: 325 KGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
+ G I IRQ SGAQI + + + + +T+T SP I
Sbjct: 258 RQGAKINEIRQMSGAQIKIANPVEGSSDRQVTITG--SPASI 297
>gi|386780909|ref|NP_001247796.1| poly(rC)-binding protein 4 [Macaca mulatta]
gi|332216103|ref|XP_003257183.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Nomascus
leucogenys]
gi|332216105|ref|XP_003257184.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Nomascus
leucogenys]
gi|332216107|ref|XP_003257185.1| PREDICTED: poly(rC)-binding protein 4 isoform 3 [Nomascus
leucogenys]
gi|402859923|ref|XP_003894386.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Papio anubis]
gi|402859925|ref|XP_003894387.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Papio anubis]
gi|402859927|ref|XP_003894388.1| PREDICTED: poly(rC)-binding protein 4 isoform 3 [Papio anubis]
gi|403291118|ref|XP_003936646.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Saimiri
boliviensis boliviensis]
gi|403291120|ref|XP_003936647.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Saimiri
boliviensis boliviensis]
gi|355559585|gb|EHH16313.1| hypothetical protein EGK_11579 [Macaca mulatta]
gi|355746662|gb|EHH51276.1| hypothetical protein EGM_10621 [Macaca fascicularis]
gi|380788331|gb|AFE66041.1| poly(rC)-binding protein 4 isoform c [Macaca mulatta]
gi|380788333|gb|AFE66042.1| poly(rC)-binding protein 4 isoform c [Macaca mulatta]
gi|383414707|gb|AFH30567.1| poly(rC)-binding protein 4 isoform c [Macaca mulatta]
gi|384943104|gb|AFI35157.1| poly(rC)-binding protein 4 isoform c [Macaca mulatta]
Length = 403
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 155/329 (47%), Gaps = 52/329 (15%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
L +R+L ++G +IGK G T+K IR+ S A+I + + + E + T+T
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE--GSCPERITTITGS------T 69
Query: 368 SMAVEAVLLLQTKINDED------------DDTVTIRLLVSSKVIGCIIGKSGSIINEIR 415
+ AV ++ K+ DED VT+RL++ + G +IGK+G+ I EIR
Sbjct: 70 AAVFHAVSMIAFKL-DEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIR 128
Query: 416 KRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPP 475
+ T A V+++ P ++ + V V G V DA++ + ++ L+ +PP
Sbjct: 129 ETTGAQVQVAGDLLP---NSTERAVTVSG----VPDAIILCVRQICAVILE------SPP 175
Query: 476 VGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSP 535
GA Y +S+ +L L +Q G ++ + + LS P
Sbjct: 176 KGATIPYHPS--LSLGTVL--------LSANQGFSVQGQYGAVTPAEVTKLQQLSSHAVP 225
Query: 536 YGSMSSYSSKLYGGLPPPL---TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDS 592
+ + S + GL P + E LVP + +G VIG+ GS ++ IR++SGA I++ +
Sbjct: 226 FATPS-----VVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQ 280
Query: 593 KSSRGDRVALISGTPEQKRAAENLIQAFI 621
G+R I+G+P A+ LI A +
Sbjct: 281 AEGAGERHVTITGSPVSIALAQYLITACL 309
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 133/339 (39%), Gaps = 79/339 (23%)
Query: 36 SVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKED 95
++ R+L +GS+IGK G+ + IR+++ AR+ + + +R+ TI
Sbjct: 17 TLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGSTAAVFH 74
Query: 96 VEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANII 155
F E LCAA + + ++++P+SQ ++I
Sbjct: 75 AVSMIAFKLDEDLCAA-----------------PANGGNVSRPPVTLRLVIPASQCGSLI 117
Query: 156 GKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIM 215
GKAG IK +R T ++V T + V +SG +A+ + I A++
Sbjct: 118 GKAGTKIKEIRETTGAQVQVAGDLLPNST-------ERAVTVSGVPDAIILCVRQICAVI 170
Query: 216 YKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPD 275
+ P+ + +P + PS S+ ++L +A
Sbjct: 171 LESPPKG------------------ATIPYH-------------PSLSLGTVLLSAN--- 196
Query: 276 LQGYA---DTGNTWPVYSTGL-------------SLVSGLVGASQSEELVIRVLCPFNKI 319
QG++ G P T L S+V GL +Q+ L P + I
Sbjct: 197 -QGFSVQGQYGAVTPAEVTKLQQLSSHAVPFATPSVVPGLDPGTQTSSQ--EFLVPNDLI 253
Query: 320 GRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
G VIG+ G I IRQ SGA I + + + E +T+T
Sbjct: 254 GCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTIT 292
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 384 EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVV 443
E T+T+R+L+ K +G IIGK G + IR+++ A + IS+G P + + +
Sbjct: 13 ELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCP------ERITTIT 66
Query: 444 GEVGSVRDALVQIILRLRDD 463
G +V A+ I +L +D
Sbjct: 67 GSTAAVFHAVSMIAFKLDED 86
>gi|410355313|gb|JAA44260.1| poly(rC) binding protein 1 [Pan troglodytes]
Length = 356
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 158/347 (45%), Gaps = 50/347 (14%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
L IR+L ++G +IGK G ++K IR+ SGA+I++ + N E +IT+T P +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIITLTG---PTNAI 68
Query: 368 SMAVEAVL-LLQTKINDEDDDT-------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
A ++ L+ IN ++ VT+RL+V + G +IGK G I EIR+ T
Sbjct: 69 FKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTG 128
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDG--------- 470
A V+++ P ++ + + + G SV + + QI L + + + G
Sbjct: 129 AQVQVAGDMLP---NSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQP 185
Query: 471 --SRNPPV---GADHI-----YSSGTG-ISMPPL-------LPSIPPVGPLGYDQRADSG 512
+ +P + G D Y T + PPL +I P+ +Q A
Sbjct: 186 MPASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISPLDLAKLNQVARQQ 245
Query: 513 SGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKA 572
S M+ + G+ + DS + Y + L T E+ +P N +G +IG+
Sbjct: 246 SHFAMMHGGT--GFAGI---DSSSPEVKGYWASLDAST--QTTHELTIPNNLIGYIIGRQ 298
Query: 573 GSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQA 619
G+N+ IR++SGA I++++ R I+G+ A+ LI A
Sbjct: 299 GANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLINA 345
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 82/366 (22%), Positives = 146/366 (39%), Gaps = 79/366 (21%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH 89
E G ++ R+L +GS+IGK G+ + IR+E+ AR+ + + +R++T
Sbjct: 7 ESGLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIIT---- 60
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAV-----ANATDNDKKRKEKEECQI 144
L +A+ K A I + + ++ T++ + ++
Sbjct: 61 ------------------LTGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRL 102
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAV 204
+VP++Q ++IGK G IK +R T ++V T + + I+G ++V
Sbjct: 103 VVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNST-------ERAITIAGVPQSV 155
Query: 205 KKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGL--------YPNAD 256
+ + I +M + + T+ P +P+ P+ GG YP+A
Sbjct: 156 TECVKQICLVMLETLSQSPQGRVMTIPYQP----MPASSPVICAGGQDRCSDAAGYPHAT 211
Query: 257 PIL--PSRSVPSILGAARVPDL---------------------QGYADTGNTWPVYSTGL 293
L P SI G + L G+A ++ P
Sbjct: 212 HDLEGPPLDAYSIQGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVK--- 268
Query: 294 SLVSGLVGASQ-SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDE 352
+ L ++Q + EL I P N IG +IG+ G I IRQ SGAQI + + +
Sbjct: 269 GYWASLDASTQTTHELTI----PNNLIGYIIGRQGANINEIRQMSGAQIKIANPVEGSSG 324
Query: 353 CVITVT 358
+T+T
Sbjct: 325 RQVTIT 330
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 9/92 (9%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+TIRLL+ K +G IIGK G + IR+ + A + IS+G+ P + ++ + G
Sbjct: 13 TLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCP------ERIITLTGPTN 66
Query: 448 SVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
++ A II +L +D ++ + + PPV
Sbjct: 67 AIFKAFAMIIDKLEEDINSSMTNSTAASRPPV 98
>gi|209156062|gb|ACI34263.1| PolyrC-binding protein 2 [Salmo salar]
Length = 318
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 156/338 (46%), Gaps = 49/338 (14%)
Query: 297 SGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVIT 356
SG++ + L IR+L ++G +IGK G ++K +R+ SGA+I++ + N E +IT
Sbjct: 3 SGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIIT 60
Query: 357 V----TAIESPDDIKSMAVEAVLLLQTKINDEDDDT-------VTIRLLVSSKVIGCIIG 405
+ TAI SM +E L+ I+ ++ VT+R++V + G +IG
Sbjct: 61 LAGPTTAI---FKAFSMIIEK---LEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIG 114
Query: 406 KSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDAL 465
K G I EIR+ T A V+++ P ++ + + + G S+ + + QI + + +
Sbjct: 115 KGGCKIKEIRESTGAQVQVAGDMLP---NSTERAITIAGTPQSIIECVKQICVVMLESPP 171
Query: 466 KDRDGSRNP-PVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLY 524
K P P G+ I++ G +A + G + L
Sbjct: 172 KGVTIPYRPKPSGSPVIFAGG----------------------QAYAVQGQHAIPQPDLT 209
Query: 525 GYGSLSMGDSPYGSMSSYSSKLYGGLPPPL---TLEVLVPANAVGKVIGKAGSNLANIRK 581
L+M SP+ M + GG+ + E+ +P + +G +IG+ GS + IR+
Sbjct: 210 KLHQLAMQQSPF-PMGPNNPGFQGGMDASAQTSSHEMTIPNDLIGCIIGRQGSKINEIRQ 268
Query: 582 ISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQA 619
+SGA I++++ DR I+G+ AE LI A
Sbjct: 269 MSGAQIKIANPVEGSADRQVTITGSAASISLAEYLINA 306
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 141/339 (41%), Gaps = 64/339 (18%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH 89
E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R++T
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIIT---- 60
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAV-----ANATDNDKKRKEKEECQI 144
L A+ K + I + ++ T++ K +I
Sbjct: 61 ------------------LAGPTTAIFKAFSMIIEKLEEDISSSMTNSTATSKPPVTLRI 102
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAV 204
+VP+SQ ++IGK G IK +R T ++V T + + I+G +++
Sbjct: 103 VVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNST-------ERAITIAGTPQSI 155
Query: 205 KKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSV 264
+ + I +M + P+ T+ P PS P+ GG A + ++
Sbjct: 156 IECVKQICVVMLESPPK-----GVTIPYRPK----PSGSPVIFAGG---QAYAVQGQHAI 203
Query: 265 PSILGAARVPD---LQGYADTGNTWPVYSTGLSLVSGLVGASQ--SEELVIRVLCPFNKI 319
P PD L A + +P+ G+ ++Q S E+ I P + I
Sbjct: 204 PQ-------PDLTKLHQLAMQQSPFPMGPNNPGFQGGMDASAQTSSHEMTI----PNDLI 252
Query: 320 GRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
G +IG+ G I IRQ SGAQI + + + + +T+T
Sbjct: 253 GCIIGRQGSKINEIRQMSGAQIKIANPVEGSADRQVTIT 291
>gi|148665205|gb|EDK97621.1| insulin-like growth factor 2 mRNA binding protein 2, isoform CRA_b
[Mus musculus]
Length = 564
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 147/320 (45%), Gaps = 49/320 (15%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSM 369
+R+L P +G +IGK G TIK+I + + +++D+ K+N VT +P+ S
Sbjct: 207 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHR-KENSGAAEKPVTIHATPEGT-SE 264
Query: 370 AVEAVLLLQTKINDEDD--DTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKG 427
A +L + K DE + V +++L + +G +IGK G + +I T + IS
Sbjct: 265 ACRMILEIMQKEADETKLAEEVPLKILAHNGFVGRLIGKEGRNLKKIEHETGTKITISSL 324
Query: 428 DKPKCADANDELVEVVGEVGSVRDALVQIILRLRD----DALK-DRDGSRNPPVGADHIY 482
+ + + V G + + +A ++I+ +LR+ D L ++ + P + +
Sbjct: 325 QDLSIYNP-ERTITVRGTIEACANAEIEIMKKLREAFENDMLAVNQQANLIPGLNLSALG 383
Query: 483 SSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSY 542
TG+S+ P PP GP G + S Y P+ + S Y
Sbjct: 384 IFSTGLSVLP-----PPAGPRG-------------VPPSPPY---------HPFATHSGY 416
Query: 543 SSKLYG-----------GLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSD 591
S LY P T+ + +P AVG +IGK G+++ + + +GA+I+++
Sbjct: 417 FSSLYPHHHFGPFPHHHSYPEQETVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAP 476
Query: 592 SKSSR-GDRVALISGTPEQK 610
++ +R+ +I+G PE +
Sbjct: 477 AEGPDVSERMVIITGPPEAQ 496
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 63/308 (20%), Positives = 120/308 (38%), Gaps = 45/308 (14%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKEDVEV 98
RIL P +G++IGK G I +I ++T++RV + GA ++ VTI++ + +
Sbjct: 208 RILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTSEA-- 265
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
C +++ A ++ K E+ +IL + +IGK
Sbjct: 266 ----------CRMILEIMQKEA-----------DETKLAEEVPLKILAHNGFVGRLIGKE 304
Query: 159 GATIKRLRSKTRTSIKVTP-KDAS--EPTHSCAMEFDNFVLISGESEAVKKALFAISAIM 215
G +K++ +T T I ++ +D S P + + + E E +KK A M
Sbjct: 305 GRNLKKIEHETGTKITISSLQDLSIYNPERTITVRGTIEACANAEIEIMKKLREAFENDM 364
Query: 216 YKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPD 275
+ + ++ P + + + G++ +LP + P G P
Sbjct: 365 LAVNQQANL---------IPGLNLSAL-------GIFSTGLSVLPPPAGPR--GVPPSPP 406
Query: 276 LQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQ 335
+A + S E+ + + P +G +IGK G IK + +
Sbjct: 407 YHPFATHSGYFSSLYPHHHFGPFPHHHSYPEQETVSLFIPTQAVGAIIGKKGAHIKQLAR 466
Query: 336 ASGAQIDV 343
+GA I +
Sbjct: 467 FAGASIKI 474
>gi|126314788|ref|XP_001377551.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 2,
partial [Monodelphis domestica]
Length = 504
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 151/336 (44%), Gaps = 50/336 (14%)
Query: 301 GASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAI 360
G ++ + +R+L P +G +IGK G TIK++ + + +++D+ K+N VT
Sbjct: 88 GQAKPPDFPLRILVPTQFVGAIIGKEGLTIKNLTKQTQSKVDIHR-KENAGASEKPVTIH 146
Query: 361 ESPDDIKSMAVEAVLLLQTKINDEDD--DTVTIRLLVSSKVIGCIIGKSGSIINEIRKRT 418
SP+ S A +L + K DE + V +++L + ++G +IGK G + +I + T
Sbjct: 147 ASPEG-SSEACRRILEIMQKEADETKAVEEVPLKILAHNSLVGRLIGKEGRNLKKIEQDT 205
Query: 419 KADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRD----DALK-DRDGSRN 473
+ IS + + + V G + + A V+I+ +LR+ D L ++ GS
Sbjct: 206 GTKITISPLQDLTIYNP-ERTITVKGTIEACSSAEVEIMRKLREAYENDMLTVNQQGSLI 264
Query: 474 PPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGD 533
P + + TG+SM P Y+
Sbjct: 265 PGLNLSALGIFSTGLSMLPSAAGPRGAAAASYN--------------------------- 297
Query: 534 SPYGSMSSYSSKLYGG-----------LPPPLTLEVLVPANAVGKVIGKAGSNLANIRKI 582
P+ S S+Y S LYG +P + + +P AVG +IGK G ++ + +
Sbjct: 298 -PFASHSAYLSGLYGAPQIGVFPHQHPVPEQEVVYLFIPTQAVGAIIGKKGHHIKQLARF 356
Query: 583 SGATIEMSDSKSSR-GDRVALISGTPEQKRAAENLI 617
+ A+I+++ ++ G+R+ +I+G PE + A+ I
Sbjct: 357 ARASIKIAPAEGPDVGERMVIITGPPEAQFKAQGRI 392
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 101/462 (21%), Positives = 191/462 (41%), Gaps = 90/462 (19%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKEDVEV 98
RIL P +G++IGK G I ++ ++T+++V + GA ++ VTI++ + +
Sbjct: 98 RILVPTQFVGAIIGKEGLTIKNLTKQTQSKVDIHRKENAGASEKPVTIHASPEGSSEA-- 155
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
C +++ A AV E+ +IL +S +IGK
Sbjct: 156 ----------CRRILEIMQKEADETKAV-----------EEVPLKILAHNSLVGRLIGKE 194
Query: 159 GATIKRLRSKTRTSIKVTP-KDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYK 217
G +K++ T T I ++P +D + + + + G EA A I M K
Sbjct: 195 GRNLKKIEQDTGTKITISPLQDLT------IYNPERTITVKGTIEACSSAEVEI---MRK 245
Query: 218 FSPREDIPLETTVREAPPSIIIPSDVPIYPPG------GLYPNADPILPSRSVPSILGAA 271
+ + T ++ S+I PG G++ +LPS + P
Sbjct: 246 LREAYENDMLTVNQQG--SLI---------PGLNLSALGIFSTGLSMLPSAAGPR----- 289
Query: 272 RVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQ----------SEELVIRVLCPFNKIGR 321
++ +++ + +SGL GA Q E+ V+ + P +G
Sbjct: 290 --------GAAAASYNPFASHSAYLSGLYGAPQIGVFPHQHPVPEQEVVYLFIPTQAVGA 341
Query: 322 VIGKGGGTIKSIRQASGAQIDVDDTK--DNRDECVITVTAIESPDDIKSMA---VEAVLL 376
+IGK G IK + + + A I + + D + VI I P + + A + L
Sbjct: 342 IIGKKGHHIKQLARFARASIKIAPAEGPDVGERMVI----ITGPPEAQFKAQGRIFGKLK 397
Query: 377 LQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADAN 436
+ N +++ + + V S G +IGK G +NE++ T A+V + + P D N
Sbjct: 398 EENFFNPKEEVKLKAHIRVPSSAAGRVIGKGGKTVNELQNLTSAEVIVPRDQTP---DEN 454
Query: 437 DE-LVEVVGEVGSVRDA---LVQIILRLRDDALKDRDGSRNP 474
+E +V+++G + + A + +I+ ++ K G+ P
Sbjct: 455 EEVIVKIIGHFFASQTAQRKIREIVQQVNQQEQKHPQGAALP 496
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 62/149 (41%), Gaps = 25/149 (16%)
Query: 34 EESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPF-PGAKDRVVTIYSHVKD 92
E+ V+Y + P +G++IGK G I + + RA +K+ P +R+V I
Sbjct: 326 EQEVVY-LFIPTQAVGAIIGKKGHHIKQLARFARASIKIAPAEGPDVGERMVII------ 378
Query: 93 KEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSA 152
+A K I + + K + K + I VPSS +
Sbjct: 379 ----------------TGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLKAHIRVPSSAAG 422
Query: 153 NIIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+IGK G T+ L++ T + + P+D +
Sbjct: 423 RVIGKGGKTVNELQNLTSAEV-IVPRDQT 450
>gi|367019960|ref|XP_003659265.1| hypothetical protein MYCTH_2296066 [Myceliophthora thermophila ATCC
42464]
gi|347006532|gb|AEO54020.1| hypothetical protein MYCTH_2296066 [Myceliophthora thermophila ATCC
42464]
Length = 482
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 89/365 (24%), Positives = 152/365 (41%), Gaps = 63/365 (17%)
Query: 304 QSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESP 363
++ + +R + + +IGKGG + IRQ SGA+ V D + E ++TV+ I
Sbjct: 119 ETSWIHVRAVISSPEAATIIGKGGENVSKIRQMSGAKCTVSDYQKGAVERILTVSGI--- 175
Query: 364 DDIKSMAVEAVLLLQTKIND-------EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
+ ++A L+++T N+ + T +RLL+ +IG IIGK G+ I EI++
Sbjct: 176 --VDAVAKAFGLIIRTLNNEPLNEPSSQHSKTYPLRLLIPHILIGSIIGKGGARIKEIQE 233
Query: 417 RTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGS----- 471
+ A R++ D C + E VV V + + L +R G
Sbjct: 234 ASGA--RLNASDS--CLPLSTERSLVVMGVADAVHIATYYVGSTLLEQLNERFGGAAASA 289
Query: 472 --------------------RNP-PVGA-----DHIYSSGT---GISMPPLLPSIP---- 498
NP P G D+ Y + MPP P
Sbjct: 290 YATRSGGPAGAVPGGMQVIPYNPQPAGGNYGNRDNYYRARADPRAHHMPPQAYPPPYGHP 349
Query: 499 ------PVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPP 552
P P+ Y + G G G+ + P+G ++ + G
Sbjct: 350 HPAHPGPAVPMPYGAHPAAAYGAGPHVQPHPVGHAGPHVATGPHGQPMPGAAHVPGA--- 406
Query: 553 PLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRA 612
PLT ++ +P + VG +IGK G + IR+ISG+ I++++ + + +R+ I+GT E R
Sbjct: 407 PLTQQIYIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQDNSNERLVTITGTEECNRM 466
Query: 613 AENLI 617
A ++
Sbjct: 467 ALYML 471
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 86/384 (22%), Positives = 158/384 (41%), Gaps = 90/384 (23%)
Query: 50 SVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLC 109
++IGK G+ ++ IRQ + A+ V D GA +R++T+ V
Sbjct: 136 TIIGKGGENVSKIRQMSGAKCTVSDYQKGAVERILTVSGIV------------------- 176
Query: 110 AAQDALLKVHAAIANAVANATDNDKKRKEKEE--CQILVPSSQSANIIGKAGATIKRLRS 167
DA+ K I + N N+ + + ++L+P +IIGK GA IK ++
Sbjct: 177 ---DAVAKAFGLIIRTLNNEPLNEPSSQHSKTYPLRLLIPHILIGSIIGKGGARIKEIQE 233
Query: 168 KTRTSIKVTPKDASEPTHSC-AMEFDNFVLISGESEAVKKALFAISAIMY-----KFSPR 221
+ + +AS+ SC + + +++ G ++AV A + + + + +F
Sbjct: 234 ASGARL-----NASD---SCLPLSTERSLVVMGVADAVHIATYYVGSTLLEQLNERFGGA 285
Query: 222 EDIPLETTVREAPPSIIIPSDVPIY---PPGGLYPNADPILPSR---------------- 262
T ++ V Y P GG Y N D +R
Sbjct: 286 AASAYATRSGGPAGAVPGGMQVIPYNPQPAGGNYGNRDNYYRARADPRAHHMPPQAYPPP 345
Query: 263 -----------SVPSILGAARV------PDLQGYADTGNTWPVYSTG-----LSLVSGLV 300
+VP GA P +Q + G+ P +TG + + +
Sbjct: 346 YGHPHPAHPGPAVPMPYGAHPAAAYGAGPHVQPH-PVGHAGPHVATGPHGQPMPGAAHVP 404
Query: 301 GASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAI 360
GA ++++ I P + +G +IGKGG I IRQ SG+ I +++ +DN +E ++T+T
Sbjct: 405 GAPLTQQIYI----PNDMVGAIIGKGGQKINEIRQISGSVIKINEPQDNSNERLVTITGT 460
Query: 361 ESPDDIKSMAVEAVLLLQTKINDE 384
E + + A+ +L +++ E
Sbjct: 461 EECNRM------ALYMLYSRLESE 478
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 33/47 (70%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTI 86
+I P+ ++G++IGK G+ IN IRQ + + +K+ +P + +R+VTI
Sbjct: 411 QIYIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQDNSNERLVTI 457
>gi|195042483|ref|XP_001991440.1| GH12054 [Drosophila grimshawi]
gi|193901198|gb|EDW00065.1| GH12054 [Drosophila grimshawi]
Length = 611
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 152/333 (45%), Gaps = 49/333 (14%)
Query: 298 GLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITV 357
G+ G + + +R+L +G +IG+ G TI++I Q S A++DV K+N ++
Sbjct: 75 GMPGPGRQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHR-KENVGSLEKSI 133
Query: 358 TAIESPDDIKSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKR 417
T +PD+ + + ++Q + + + +++L + +IG IIGKSG+ I I +
Sbjct: 134 TIYGNPDNCTNACKRILEVMQQEALSTNKGEICLKILAHNNLIGRIIGKSGNTIKRIMQD 193
Query: 418 TKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVG 477
T + +S + + + ++ V G + ++ A QI +LR D +
Sbjct: 194 TDTKITVSSINDINSYNL-ERIITVKGLIENMSRAENQISTKLRQSYENDLQA-----IA 247
Query: 478 ADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYG 537
+ + P + P+ + S G GM+ ++S+ P+
Sbjct: 248 PQSL-----------MFPGLHPMAMM-------STPGNGMVFNTSM-----------PFP 278
Query: 538 SMSSYS-SKLYGGLPPPL-------TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEM 589
S S++ SK + PP T + +P NAVG +IG GS++ +I + S A++++
Sbjct: 279 SCQSFAMSKTPASVVPPAFPNDMQETTYLYIPNNAVGAIIGTKGSHIRSIMRFSSASLKI 338
Query: 590 SDSKS-----SRGDRVALISGTPEQKRAAENLI 617
+ + + +R I GTPE + A+ +I
Sbjct: 339 APLDADKPLDQQTERKVTIVGTPEGQWKAQYMI 371
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 110/459 (23%), Positives = 199/459 (43%), Gaps = 82/459 (17%)
Query: 19 KNQKRRI-NEKDEK------GNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVK 71
KNQ+R I N+++ G + RIL ++G++IG+ G I +I Q++RARV
Sbjct: 60 KNQRRSIRNQRNPYPGMPGPGRQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVD 119
Query: 72 VV-DPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANAT 130
V G+ ++ +TIY + + + C +++ A N
Sbjct: 120 VHRKENVGSLEKSITIYGNPDNCTNA------------CKRILEVMQQEALSTN------ 161
Query: 131 DNDKKRKEKEEC-QILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAM 189
+ E C +IL ++ IIGK+G TIKR+ T T I V S +
Sbjct: 162 -------KGEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITV-----SSINDINSY 209
Query: 190 EFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPG 249
+ + + G E + +A IS K + L+ AP S++ P ++P
Sbjct: 210 NLERIITVKGLIENMSRAENQIST---KLRQSYENDLQAI---APQSLMFPG---LHPMA 260
Query: 250 GLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELV 309
+ + ++ + S+P P Q +A + T S+V E
Sbjct: 261 MMSTPGNGMVFNTSMP-------FPSCQSFA-------MSKTPASVVPPAFPNDMQETTY 306
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQI-----DVDDTKDNRDECVITVTAIESPD 364
+ + P N +G +IG G I+SI + S A + D D D + E +T+ + +P+
Sbjct: 307 LYI--PNNAVGAIIGTKGSHIRSIMRFSSASLKIAPLDADKPLDQQTERKVTI--VGTPE 362
Query: 365 DIKSMAVEAVLLLQTKINDE------DDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRT 418
+A ++ K+ +E DD +T+ LLV+S +G IIGK G + E+++ T
Sbjct: 363 G----QWKAQYMIFEKMREEGFMCGTDDVRLTVELLVASSQVGRIIGKGGQNVRELQRVT 418
Query: 419 KADVRISKGDKPKCADANDEL-VEVVGEVGSVRDALVQI 456
+ +++ + + ++E V ++G+ SV+ A +I
Sbjct: 419 GSVIKLPEHALAPPSGGDEETPVHIIGQFYSVQSAQRRI 457
>gi|242063550|ref|XP_002453064.1| hypothetical protein SORBIDRAFT_04g037690 [Sorghum bicolor]
gi|241932895|gb|EES06040.1| hypothetical protein SORBIDRAFT_04g037690 [Sorghum bicolor]
Length = 343
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 147/322 (45%), Gaps = 30/322 (9%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD---NRDECVITVTAIESPDDI 366
+R L G +IGKGG TI + SGA+I + + + ++ +I V+ + + +
Sbjct: 42 LRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRIIMVSGLFD-EVM 100
Query: 367 KSMA-VEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRIS 425
K+M + LL + + +E + +RL+V + G IIGK G+ I + + A ++IS
Sbjct: 101 KAMELILEKLLAEGEEFNEAEARPKVRLVVPNSSCGGIIGKGGATIKSFIEESHAGIKIS 160
Query: 426 KGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSG 485
D +D LV V G + +A+ I+ +L +D + S P A + +
Sbjct: 161 PQDN-NYVGLHDRLVTVTGTFDNQMNAIDLILKKLSEDVHYPPNLSSPFPY-AGLTFPNY 218
Query: 486 TGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSK 545
G+ + ++P +P Y+ + G GYG + P M S +S
Sbjct: 219 PGVPVGYMIPQVP------YNNAVNYGPN---------NGYGGRYQNNKPSTPMRSPASN 263
Query: 546 LYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSK---SSRGDRVAL 602
+L + + +G V+G+AG N+ I + SGA I++SD S DR
Sbjct: 264 -----EAQESLTIGIADEHIGAVVGRAGRNITEIIQASGARIKISDRGDFISGTSDRKVT 318
Query: 603 ISGTPEQKRAAENLIQAFIMAT 624
I+GT E R AE++I + A+
Sbjct: 319 ITGTSEAIRTAESMIMQRVSAS 340
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 130/326 (39%), Gaps = 54/326 (16%)
Query: 27 EKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV---DPFPGAKDRV 83
E D+K E+ R L + G +IGK G IN + ++ AR+++ + FPG DR+
Sbjct: 32 EGDDK--EKPTHLRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRI 89
Query: 84 VTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQ 143
+ + D ++K I + + + + + + +
Sbjct: 90 IMV----------------------SGLFDEVMKAMELILEKLLAEGEEFNEAEARPKVR 127
Query: 144 ILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEA 203
++VP+S IIGK GATIK ++ IK++P+D ++ D V ++G
Sbjct: 128 LVVPNSSCGGIIGKGGATIKSFIEESHAGIKISPQD-----NNYVGLHDRLVTVTG---T 179
Query: 204 VKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGL-YPNADPILPSR 262
+ AI I+ K S ED+ PP++ P +P GL +PN P
Sbjct: 180 FDNQMNAIDLILKKLS--EDV-------HYPPNLSSP-----FPYAGLTFPN----YPGV 221
Query: 263 SVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRV 322
V ++ + Y Y AS + + + IG V
Sbjct: 222 PVGYMIPQVPYNNAVNYGPNNGYGGRYQNNKPSTPMRSPASNEAQESLTIGIADEHIGAV 281
Query: 323 IGKGGGTIKSIRQASGAQIDVDDTKD 348
+G+ G I I QASGA+I + D D
Sbjct: 282 VGRAGRNITEIIQASGARIKISDRGD 307
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 383 DEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEV 442
D+ + +R LVS+ GCIIGK GS IN+ + ++ A +++S+ + ND ++ V
Sbjct: 34 DDKEKPTHLRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSHE-FFPGTNDRIIMV 92
Query: 443 VGEVGSVRDALVQIILRLRDDALKDRDGSRNPPV 476
G V A+ I+ +L + + + P V
Sbjct: 93 SGLFDEVMKAMELILEKLLAEGEEFNEAEARPKV 126
Score = 39.7 bits (91), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 553 PLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS---SRGDRVALISGTPEQ 609
P L LV A G +IGK GS + + + SGA I++S S DR+ ++SG ++
Sbjct: 39 PTHLRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRIIMVSGLFDE 98
Query: 610 KRAAENLIQAFIMA 623
A LI ++A
Sbjct: 99 VMKAMELILEKLLA 112
>gi|195394077|ref|XP_002055672.1| GJ18657 [Drosophila virilis]
gi|194150182|gb|EDW65873.1| GJ18657 [Drosophila virilis]
Length = 650
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 151/333 (45%), Gaps = 49/333 (14%)
Query: 298 GLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITV 357
G+ G + + +R+L +G +IG+ G TI++I Q S A++DV K+N ++
Sbjct: 133 GMPGPGRQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHR-KENVGSLEKSI 191
Query: 358 TAIESPDDIKSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKR 417
T +P++ + + ++Q + + + +++L + +IG IIGKSG+ I I +
Sbjct: 192 TIYGNPENCTNACKRILEVMQQEALSTNKGEICLKILAHNNLIGRIIGKSGNTIKRIMQD 251
Query: 418 TKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVG 477
T + +S + + + ++ V G + ++ A QI +LR D
Sbjct: 252 TDTKITVSSINDINSFNL-ERIITVKGLIENMSRAENQISTKLRQSYENDLQ-------- 302
Query: 478 ADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYG 537
+M P P + P+ S G GM+ ++S+ P+
Sbjct: 303 -----------AMAPQSLMFPGLHPMAM----MSTPGNGMVFNTSM-----------PFP 336
Query: 538 SMSSYS-SKLYGGLPPPL-------TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEM 589
S S++ SK + PP T + +P NAVG +IG GS++ +I + S A++++
Sbjct: 337 SCQSFAMSKTPASVVPPAFPNDMQETTYLYIPNNAVGAIIGTKGSHIRSIMRFSSASLKI 396
Query: 590 SDSKS-----SRGDRVALISGTPEQKRAAENLI 617
+ + + +R I GTPE + A+ +I
Sbjct: 397 APLDADKPLDQQTERKVTIVGTPEGQWKAQYMI 429
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 116/478 (24%), Positives = 206/478 (43%), Gaps = 91/478 (19%)
Query: 19 KNQKRRI-NEKDEK------GNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVK 71
KNQ+R I N+++ G + RIL ++G++IG+ G I +I Q++RARV
Sbjct: 118 KNQRRSIRNQRNPYPGMPGPGRQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVD 177
Query: 72 VV-DPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANAT 130
V G+ ++ +TIY + ++ + C +++ A N
Sbjct: 178 VHRKENVGSLEKSITIYGNPENCTNA------------CKRILEVMQQEALSTN------ 219
Query: 131 DNDKKRKEKEEC-QILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAM 189
+ E C +IL ++ IIGK+G TIKR+ T T I V S +
Sbjct: 220 -------KGEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITV-----SSINDINSF 267
Query: 190 EFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPG 249
+ + + G E + +A IS + + S D+ AP S++ P ++P
Sbjct: 268 NLERIITVKGLIENMSRAENQISTKLRQ-SYENDLQAM-----APQSLMFPG---LHPMA 318
Query: 250 GLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELV 309
+ + ++ + S+P P Q +A + T S+V E
Sbjct: 319 MMSTPGNGMVFNTSMP-------FPSCQSFA-------MSKTPASVVPPAFPNDMQETTY 364
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQI-----DVDDTKDNRDECVITVTAIESPD 364
+ + P N +G +IG G I+SI + S A + D D D + E +T+ + +P+
Sbjct: 365 LYI--PNNAVGAIIGTKGSHIRSIMRFSSASLKIAPLDADKPLDQQTERKVTI--VGTPE 420
Query: 365 DIKSMAVEAVLLLQTKINDE------DDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRT 418
+A ++ K+ +E DD +T+ LLV+S +G IIGK G + E+++ T
Sbjct: 421 G----QWKAQYMIFEKMREEGFMCGTDDVRLTVELLVASSQVGRIIGKGGQNVRELQRVT 476
Query: 419 KADVRISKGDKPKCADANDEL-VEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPP 475
+ +++ + + ++E V ++G SV+ A R+R L S NPP
Sbjct: 477 GSVIKLPEHALAPPSGGDEETPVHIIGPFYSVQSAQ----RRIRAMML-----STNPP 525
Score = 38.5 bits (88), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 30/38 (78%)
Query: 554 LTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSD 591
LT+E+LV ++ VG++IGK G N+ +++++G+ I++ +
Sbjct: 447 LTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIKLPE 484
>gi|351714348|gb|EHB17267.1| Poly(rC)-binding protein 1 [Heterocephalus glaber]
Length = 355
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 157/347 (45%), Gaps = 50/347 (14%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
L IR+L ++G +IGK G ++K IR+ SGA+I++ + N E +IT+T P +
Sbjct: 13 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIITLTG---PTNAI 67
Query: 368 SMAVEAVL-LLQTKINDEDDDT-------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
A ++ L+ IN ++ VT+RL+V + G +IGK G I EIR+ T
Sbjct: 68 FKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTG 127
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGS-------- 471
A V+++ P ++ + + + G SV + + QI L + + + G
Sbjct: 128 AQVQVAGDMLP---NSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQP 184
Query: 472 --RNPPV----GADHI-----YSSGTG-ISMPPL-------LPSIPPVGPLGYDQRADSG 512
+ PV G D Y T + PPL +I P+ +Q A
Sbjct: 185 MPASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISPLDLAKLNQVARQQ 244
Query: 513 SGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKA 572
S M+ + G+ + DS + Y + L T E+ +P N +G +IG+
Sbjct: 245 SHFAMMHGGT--GFAGI---DSSSPEVKGYWASLDAST--QTTHELTIPNNLIGCIIGRQ 297
Query: 573 GSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQA 619
G+N+ IR++SGA I++++ R I+G+ A+ LI A
Sbjct: 298 GANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLINA 344
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 80/362 (22%), Positives = 145/362 (40%), Gaps = 73/362 (20%)
Query: 31 KGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHV 90
+G ++ R+L +GS+IGK G+ + IR+E+ AR+ + + +R++T
Sbjct: 7 EGLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIIT----- 59
Query: 91 KDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAV-----ANATDNDKKRKEKEECQIL 145
L +A+ K A I + + ++ T++ + +++
Sbjct: 60 -----------------LTGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLV 102
Query: 146 VPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVK 205
VP++Q ++IGK G IK +R T ++V T + + I+G ++V
Sbjct: 103 VPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNST-------ERAITIAGVPQSVT 155
Query: 206 KALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGL--------YPNADP 257
+ + I +M + + T+ P +P+ P+ GG YP+A
Sbjct: 156 ECVKQICLVMLETLSQSPQGRVMTIPYQP----MPASSPVICAGGQDRCSDAAGYPHATH 211
Query: 258 IL--PSRSVPSILGAARV-----PDLQGYADTGNTWPVYSTGLSLV-------------S 297
L P SI G + L A + + + G +
Sbjct: 212 DLEGPPLDAYSIQGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWA 271
Query: 298 GLVGASQ-SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVIT 356
L ++Q + EL I P N IG +IG+ G I IRQ SGAQI + + + +T
Sbjct: 272 SLDASTQTTHELTI----PNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVT 327
Query: 357 VT 358
+T
Sbjct: 328 IT 329
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 9/92 (9%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+TIRLL+ K +G IIGK G + IR+ + A + IS+G+ P + ++ + G
Sbjct: 12 TLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCP------ERIITLTGPTN 65
Query: 448 SVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
++ A II +L +D ++ + + PPV
Sbjct: 66 AIFKAFAMIIDKLEEDINSSMTNSTAASRPPV 97
>gi|392347468|ref|XP_003749842.1| PREDICTED: poly(rC)-binding protein 1 [Rattus norvegicus]
Length = 516
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 157/347 (45%), Gaps = 50/347 (14%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
L IR+L ++G +IGK G ++K IR+ SGA+I++ + N E +IT+T P +
Sbjct: 174 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIITLTG---PTNAI 228
Query: 368 SMAVEAVL-LLQTKINDEDDDT-------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
A ++ L+ IN ++ VT+RL+V + G +IGK G I EIR+ T
Sbjct: 229 FKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTG 288
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGS-------- 471
A V+++ P ++ + + + G SV + + QI L + + + G
Sbjct: 289 AQVQVAGDMLP---NSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQP 345
Query: 472 --RNPPV----GADHI-----YSSGTG-ISMPPL-------LPSIPPVGPLGYDQRADSG 512
+ PV G D Y T + PPL +I P+ +Q A
Sbjct: 346 MPASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISPLDLAKLNQVARQQ 405
Query: 513 SGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKA 572
S M+ + G+ + DS + Y + L T E+ +P N +G +IG+
Sbjct: 406 SHFAMMHGGT--GFAGI---DSSSPEVKGYWASLDAST--QTTHELTIPNNLIGCIIGRQ 458
Query: 573 GSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQA 619
G+N+ IR++SGA I++++ R I+G+ A+ LI A
Sbjct: 459 GANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLINA 505
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 82/366 (22%), Positives = 146/366 (39%), Gaps = 79/366 (21%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH 89
E G ++ R+L +GS+IGK G+ + IR+E+ AR+ + + +R++T
Sbjct: 167 ESGLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIIT---- 220
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAV-----ANATDNDKKRKEKEECQI 144
L +A+ K A I + + ++ T++ + ++
Sbjct: 221 ------------------LTGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRL 262
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAV 204
+VP++Q ++IGK G IK +R T ++V T + + I+G ++V
Sbjct: 263 VVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNST-------ERAITIAGVPQSV 315
Query: 205 KKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGL--------YPNAD 256
+ + I +M + + T+ P +P+ P+ GG YP+A
Sbjct: 316 TECVKQICLVMLETLSQSPQGRVMTIPYQP----MPASSPVICAGGQDRCSDAAGYPHAT 371
Query: 257 PIL--PSRSVPSILGAARVPDL---------------------QGYADTGNTWPVYSTGL 293
L P SI G + L G+A ++ P
Sbjct: 372 HDLEGPPLDAYSIQGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVK--- 428
Query: 294 SLVSGLVGASQ-SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDE 352
+ L ++Q + EL I P N IG +IG+ G I IRQ SGAQI + + +
Sbjct: 429 GYWASLDASTQTTHELTI----PNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSG 484
Query: 353 CVITVT 358
+T+T
Sbjct: 485 RQVTIT 490
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 9/92 (9%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+TIRLL+ K +G IIGK G + IR+ + A + IS+G+ P + ++ + G
Sbjct: 173 TLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCP------ERIITLTGPTN 226
Query: 448 SVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
++ A II +L +D ++ + + PPV
Sbjct: 227 AIFKAFAMIIDKLEEDINSSMTNSTAASRPPV 258
>gi|154319404|ref|XP_001559019.1| hypothetical protein BC1G_02183 [Botryotinia fuckeliana B05.10]
Length = 453
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 88/336 (26%), Positives = 157/336 (46%), Gaps = 39/336 (11%)
Query: 304 QSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESP 363
+S + +R + + VIGKGG + +R+ SGA+ V D + E ++TV+ +
Sbjct: 122 ESGWIHVRSVITSAEAATVIGKGGENVSLVRKLSGAKCTVSDYQKGAVERILTVSGV--- 178
Query: 364 DDIKSMAVEAVLLLQTKIN-------DEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
+ ++A L+++T N D T +RLL+ +IG IIGK G I EI++
Sbjct: 179 --VDAVAKAFGLIIRTLNNEPLEAPSDSTSKTYPLRLLIPHILIGSIIGKGGVRIKEIQE 236
Query: 417 RTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPV 476
+ A R++ D LV V+G +V A + L + L +R G P
Sbjct: 237 ASGA--RLNASDSYLPLSTERSLV-VLGVADAVHIATYYVGSTLFEQ-LTERFG--GPAA 290
Query: 477 GADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGI-----GMLSSSSLYGYGSL-- 529
A S G +P +P+ R + S + G +S ++ GYG +
Sbjct: 291 SAYASRSGGPAGVVPGAMPN------HTVKDRHLTNSQLPLHITGGHASPAVGGYGGVGP 344
Query: 530 ----SMGDS---PYGSMSSYSSKLYGGLP-PPLTLEVLVPANAVGKVIGKAGSNLANIRK 581
G + P+G+ + G +P PLT ++ +P + VG +IGK G+ + IR+
Sbjct: 345 QQPQQAGHAVPQPHGATGPQGQPMPGAIPGQPLTQQIFIPNDMVGAIIGKGGAKINEIRQ 404
Query: 582 ISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLI 617
+SG+ I++++ + + +R+ I+GT E + A ++
Sbjct: 405 LSGSVIKINEPQDNSNERLVTITGTAECNQMALYML 440
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 84/357 (23%), Positives = 155/357 (43%), Gaps = 70/357 (19%)
Query: 50 SVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFN------ 103
+VIGK G+ ++ +R+ + A+ V D GA +R++T+ S V D V F
Sbjct: 139 TVIGKGGENVSLVRKLSGAKCTVSDYQKGAVERILTV-SGVVDA----VAKAFGLIIRTL 193
Query: 104 DKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIK 163
+ EPL A D+ K + ++L+P +IIGK G IK
Sbjct: 194 NNEPLEAPSDSTSKTYP---------------------LRLLIPHILIGSIIGKGGVRIK 232
Query: 164 RLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMY-KFSPRE 222
++ + + + D+ P + + +++ G ++AV A + + + ++ + + R
Sbjct: 233 EIQEASGARLNAS--DSYLP-----LSTERSLVVLGVADAVHIATYYVGSTLFEQLTERF 285
Query: 223 DIPLETTV--REAPPSIIIPSDVPIYPPGGLYPNA---DPILPSRSVP-SILGAARVPDL 276
P + R P+ ++P G PN D L + +P I G P +
Sbjct: 286 GGPAASAYASRSGGPAGVVP---------GAMPNHTVKDRHLTNSQLPLHITGGHASPAV 336
Query: 277 QGYADTGNTWPVYS-------TGLSLVSG--LVGASQSEELVIRVLCPFNKIGRVIGKGG 327
GY G P + G + G + GA + L ++ P + +G +IGKGG
Sbjct: 337 GGYGGVGPQQPQQAGHAVPQPHGATGPQGQPMPGAIPGQPLTQQIFIPNDMVGAIIGKGG 396
Query: 328 GTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKINDE 384
I IRQ SG+ I +++ +DN +E ++T+T + + A+ +L +++ E
Sbjct: 397 AKINEIRQLSGSVIKINEPQDNSNERLVTITGTAECNQM------ALYMLYSRLESE 447
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 34/52 (65%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTI 86
+ + +I P+ ++G++IGK G IN IRQ + + +K+ +P + +R+VTI
Sbjct: 375 QPLTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQDNSNERLVTI 426
>gi|6754994|ref|NP_035995.1| poly(rC)-binding protein 1 [Mus musculus]
gi|62751650|ref|NP_001015565.1| poly(rC)-binding protein 1 [Bos taurus]
gi|126723096|ref|NP_001075593.1| poly(rC)-binding protein 1 [Oryctolagus cuniculus]
gi|222352151|ref|NP_006187.2| poly(rC)-binding protein 1 [Homo sapiens]
gi|379642963|ref|NP_001243850.1| poly(rC)-binding protein 1 [Equus caballus]
gi|114577924|ref|XP_515530.2| PREDICTED: poly(rC)-binding protein 1 isoform 3 [Pan troglodytes]
gi|296223628|ref|XP_002757702.1| PREDICTED: poly(rC)-binding protein 1-like [Callithrix jacchus]
gi|297667414|ref|XP_002811975.1| PREDICTED: poly(rC)-binding protein 1 isoform 1 [Pongo abelii]
gi|301758216|ref|XP_002914950.1| PREDICTED: poly(rC)-binding protein 1-like [Ailuropoda melanoleuca]
gi|332226765|ref|XP_003262561.1| PREDICTED: poly(rC)-binding protein 1 [Nomascus leucogenys]
gi|348566575|ref|XP_003469077.1| PREDICTED: poly(rC)-binding protein 1-like [Cavia porcellus]
gi|354491739|ref|XP_003508012.1| PREDICTED: poly(rC)-binding protein 1-like [Cricetulus griseus]
gi|395731716|ref|XP_003775951.1| PREDICTED: poly(rC)-binding protein 1 isoform 2 [Pongo abelii]
gi|395841306|ref|XP_003793486.1| PREDICTED: poly(rC)-binding protein 1 [Otolemur garnettii]
gi|402891162|ref|XP_003908824.1| PREDICTED: poly(rC)-binding protein 1 [Papio anubis]
gi|410954989|ref|XP_003984141.1| PREDICTED: poly(rC)-binding protein 1 [Felis catus]
gi|426223390|ref|XP_004005858.1| PREDICTED: poly(rC)-binding protein 1 [Ovis aries]
gi|426335835|ref|XP_004029412.1| PREDICTED: poly(rC)-binding protein 1 [Gorilla gorilla gorilla]
gi|12230408|sp|O19048.1|PCBP1_RABIT RecName: Full=Poly(rC)-binding protein 1; AltName: Full=Alpha-CP1;
AltName: Full=Heterogeneous nuclear ribonucleoprotein
E1; Short=hnRNP E1
gi|42559420|sp|P60335.1|PCBP1_MOUSE RecName: Full=Poly(rC)-binding protein 1; AltName: Full=Alpha-CP1;
AltName: Full=Heterogeneous nuclear ribonucleoprotein
E1; Short=hnRNP E1
gi|42560548|sp|Q15365.2|PCBP1_HUMAN RecName: Full=Poly(rC)-binding protein 1; AltName: Full=Alpha-CP1;
AltName: Full=Heterogeneous nuclear ribonucleoprotein
E1; Short=hnRNP E1; AltName: Full=Nucleic acid-binding
protein SUB2.3
gi|75040221|sp|Q5E9A3.1|PCBP1_BOVIN RecName: Full=Poly(rC)-binding protein 1; AltName: Full=Alpha-CP1
gi|2134737|pir||S58529 alpha-complex protein 1 - human
gi|5805273|gb|AAD51920.1|AF139894_1 RNA-binding protein alpha-CP1 [Mus musculus]
gi|5805275|gb|AAD51921.1|AF139895_1 RNA-binding protein alpha-CP1 [Mus musculus]
gi|1215671|gb|AAA91317.1| alpha-CP1 [Homo sapiens]
gi|2644966|emb|CAA05814.1| hnRNP-E1 protein [Oryctolagus cuniculus]
gi|13435897|gb|AAH04793.1| Poly(rC) binding protein 1 [Mus musculus]
gi|24980783|gb|AAH39742.1| Poly(rC) binding protein 1 [Homo sapiens]
gi|47124405|gb|AAH69915.1| Poly(rC) binding protein 1 [Mus musculus]
gi|59858399|gb|AAX09034.1| poly(rC) binding protein 1 [Bos taurus]
gi|62702265|gb|AAX93191.1| unknown [Homo sapiens]
gi|119620240|gb|EAW99834.1| poly(rC) binding protein 1 [Homo sapiens]
gi|148666767|gb|EDK99183.1| mCG130511 [Mus musculus]
gi|189054893|dbj|BAG36897.1| unnamed protein product [Homo sapiens]
gi|208968661|dbj|BAG74169.1| poly(rC) binding protein 1 [synthetic construct]
gi|281346699|gb|EFB22283.1| hypothetical protein PANDA_002891 [Ailuropoda melanoleuca]
gi|296482414|tpg|DAA24529.1| TPA: poly(rC)-binding protein 1 [Bos taurus]
gi|312151908|gb|ADQ32466.1| poly(rC) binding protein 1 [synthetic construct]
gi|344250809|gb|EGW06913.1| Poly(rC)-binding protein 1 [Cricetulus griseus]
gi|355565760|gb|EHH22189.1| hypothetical protein EGK_05412 [Macaca mulatta]
gi|355751386|gb|EHH55641.1| hypothetical protein EGM_04885 [Macaca fascicularis]
gi|380813262|gb|AFE78505.1| poly(rC)-binding protein 1 [Macaca mulatta]
gi|380813264|gb|AFE78506.1| poly(rC)-binding protein 1 [Macaca mulatta]
gi|383418769|gb|AFH32598.1| poly(rC)-binding protein 1 [Macaca mulatta]
gi|384940310|gb|AFI33760.1| poly(rC)-binding protein 1 [Macaca mulatta]
gi|384947378|gb|AFI37294.1| poly(rC)-binding protein 1 [Macaca mulatta]
gi|410262902|gb|JAA19417.1| poly(rC) binding protein 1 [Pan troglodytes]
gi|431912608|gb|ELK14626.1| Poly(rC)-binding protein 1 [Pteropus alecto]
gi|444723406|gb|ELW64063.1| Poly(rC)-binding protein 1 [Tupaia chinensis]
Length = 356
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 158/347 (45%), Gaps = 50/347 (14%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
L IR+L ++G +IGK G ++K IR+ SGA+I++ + N E +IT+T P +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIITLTG---PTNAI 68
Query: 368 SMAVEAVL-LLQTKINDEDDDT-------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
A ++ L+ IN ++ VT+RL+V + G +IGK G I EIR+ T
Sbjct: 69 FKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTG 128
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDG--------- 470
A V+++ P ++ + + + G SV + + QI L + + + G
Sbjct: 129 AQVQVAGDMLP---NSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQP 185
Query: 471 --SRNPPV---GADHI-----YSSGTG-ISMPPL-------LPSIPPVGPLGYDQRADSG 512
+ +P + G D Y T + PPL +I P+ +Q A
Sbjct: 186 MPASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISPLDLAKLNQVARQQ 245
Query: 513 SGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKA 572
S M+ + G+ + DS + Y + L T E+ +P N +G +IG+
Sbjct: 246 SHFAMMHGGT--GFAGI---DSSSPEVKGYWASLDAST--QTTHELTIPNNLIGCIIGRQ 298
Query: 573 GSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQA 619
G+N+ IR++SGA I++++ R I+G+ A+ LI A
Sbjct: 299 GANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLINA 345
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 81/363 (22%), Positives = 145/363 (39%), Gaps = 73/363 (20%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH 89
E G ++ R+L +GS+IGK G+ + IR+E+ AR+ + + +R++T
Sbjct: 7 ESGLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIIT---- 60
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAV-----ANATDNDKKRKEKEECQI 144
L +A+ K A I + + ++ T++ + ++
Sbjct: 61 ------------------LTGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRL 102
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAV 204
+VP++Q ++IGK G IK +R T ++V T + + I+G ++V
Sbjct: 103 VVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNST-------ERAITIAGVPQSV 155
Query: 205 KKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGL--------YPNAD 256
+ + I +M + + T+ P +P+ P+ GG YP+A
Sbjct: 156 TECVKQICLVMLETLSQSPQGRVMTIPYQP----MPASSPVICAGGQDRCSDAAGYPHAT 211
Query: 257 PIL--PSRSVPSILGAARV-----PDLQGYADTGNTWPVYSTGLSLV------------- 296
L P SI G + L A + + + G
Sbjct: 212 HDLEGPPLDAYSIQGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYW 271
Query: 297 SGLVGASQ-SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVI 355
+ L ++Q + EL I P N IG +IG+ G I IRQ SGAQI + + + +
Sbjct: 272 ASLDASTQTTHELTI----PNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQV 327
Query: 356 TVT 358
T+T
Sbjct: 328 TIT 330
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 9/92 (9%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+TIRLL+ K +G IIGK G + IR+ + A + IS+G+ P + ++ + G
Sbjct: 13 TLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCP------ERIITLTGPTN 66
Query: 448 SVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
++ A II +L +D ++ + + PPV
Sbjct: 67 AIFKAFAMIIDKLEEDINSSMTNSTAASRPPV 98
>gi|460771|emb|CAA55016.1| hnRNP-E1 [Homo sapiens]
Length = 356
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 158/347 (45%), Gaps = 50/347 (14%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
L IR+L ++G +IGK G ++K IR+ SGA+I++ + N E +IT+T P +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIITLTG---PTNAI 68
Query: 368 SMAVEAVL-LLQTKINDEDDDT-------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
A ++ L+ IN ++ VT+RL+V + G +IGK G I EIR+ T
Sbjct: 69 FKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTG 128
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDG--------- 470
A V+++ P ++ + + + G SV + + QI L + + + G
Sbjct: 129 AQVQVAGDMLP---NSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQP 185
Query: 471 --SRNPPV---GADHI-----YSSGTG-ISMPPL-------LPSIPPVGPLGYDQRADSG 512
+ +P + G D Y T + PPL +I P+ +Q A
Sbjct: 186 MPASSPVICAGGQDRCSDAVGYPHATHDLEGPPLDAYSIQGQHTISPLDLAKLNQVARQQ 245
Query: 513 SGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKA 572
S M+ + G+ + DS + Y + L T E+ +P N +G +IG+
Sbjct: 246 SHFAMMHGGT--GFAGI---DSSSPEVKGYWASLDAST--QTTHELTIPNNLIGCIIGRQ 298
Query: 573 GSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQA 619
G+N+ IR++SGA I++++ R I+G+ A+ LI A
Sbjct: 299 GANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLINA 345
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 82/366 (22%), Positives = 146/366 (39%), Gaps = 79/366 (21%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH 89
E G ++ R+L +GS+IGK G+ + IR+E+ AR+ + + +R++T
Sbjct: 7 ESGLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIIT---- 60
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAV-----ANATDNDKKRKEKEECQI 144
L +A+ K A I + + ++ T++ + ++
Sbjct: 61 ------------------LTGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRL 102
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAV 204
+VP++Q ++IGK G IK +R T ++V T + + I+G ++V
Sbjct: 103 VVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNST-------ERAITIAGVPQSV 155
Query: 205 KKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGL--------YPNAD 256
+ + I +M + + T+ P +P+ P+ GG YP+A
Sbjct: 156 TECVKQICLVMLETLSQSPQGRVMTIPYQP----MPASSPVICAGGQDRCSDAVGYPHAT 211
Query: 257 PIL--PSRSVPSILGAARVPDL---------------------QGYADTGNTWPVYSTGL 293
L P SI G + L G+A ++ P
Sbjct: 212 HDLEGPPLDAYSIQGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVK--- 268
Query: 294 SLVSGLVGASQ-SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDE 352
+ L ++Q + EL I P N IG +IG+ G I IRQ SGAQI + + +
Sbjct: 269 GYWASLDASTQTTHELTI----PNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSG 324
Query: 353 CVITVT 358
+T+T
Sbjct: 325 RQVTIT 330
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 9/92 (9%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+TIRLL+ K +G IIGK G + IR+ + A + IS+G+ P + ++ + G
Sbjct: 13 TLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCP------ERIITLTGPTN 66
Query: 448 SVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
++ A II +L +D ++ + + PPV
Sbjct: 67 AIFKAFAMIIDKLEEDINSSMTNSTAASRPPV 98
>gi|48716278|dbj|BAD22893.1| KH domain-containing protein NOVA-like [Oryza sativa Japonica
Group]
gi|48716520|dbj|BAD23125.1| KH domain-containing protein NOVA-like [Oryza sativa Japonica
Group]
Length = 343
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 150/326 (46%), Gaps = 39/326 (11%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD---NRDECVITVTAIESPDDI 366
+R L G +IGKGG TI + SGA+I + + + ++ +I V+ + + I
Sbjct: 43 LRFLVSNTAAGCIIGKGGSTINEFQSQSGARIQLSRSHEFFPGTNDRIIMVSGLFD-EVI 101
Query: 367 KSMA-VEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRIS 425
K+M + LL + + ++E + +RL+V + G IIGK GS I + + A ++IS
Sbjct: 102 KAMELILEKLLAEGEESNEAEARPKVRLVVPNSSCGGIIGKGGSTIKSFIEDSHAGIKIS 161
Query: 426 KGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSG 485
D +D LV V G + A+ I+ +L +D + S P A + S
Sbjct: 162 PQDN-NFVGLHDRLVTVTGPLDHQMRAIYLILSKLSEDVHYPPNLSSPFPY-AGLGFPSY 219
Query: 486 TGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSK 545
G+ + ++P +P Y+ + G GYG + P M S ++
Sbjct: 220 PGVPVGYMIPQVP------YNNAVNYGPN----------GYGGRYQNNKPSTPMRSPANN 263
Query: 546 LYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVA---- 601
+L + + +G V+G+AG N+ I + SGA I++SD RGD +A
Sbjct: 264 -----DAQDSLTIGIADEHIGAVVGRAGRNITEIIQASGARIKISD----RGDFIAGTSE 314
Query: 602 ---LISGTPEQKRAAENLIQAFIMAT 624
I+GT E +AAE++I + A+
Sbjct: 315 RKVTITGTSEAIQAAESMIMQRVTAS 340
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 133/337 (39%), Gaps = 81/337 (24%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV---DPFPGAKDRVVTI 86
E E+ R L + G +IGK G IN + ++ AR+++ + FPG DR++ +
Sbjct: 34 EDDKEKPTHLRFLVSNTAAGCIIGKGGSTINEFQSQSGARIQLSRSHEFFPGTNDRIIMV 93
Query: 87 YSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILV 146
D ++K I + + + + + + +++V
Sbjct: 94 ----------------------SGLFDEVIKAMELILEKLLAEGEESNEAEARPKVRLVV 131
Query: 147 PSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKK 206
P+S IIGK G+TIK + IK++P+D ++ D V ++G +
Sbjct: 132 PNSSCGGIIGKGGSTIKSFIEDSHAGIKISPQD-----NNFVGLHDRLVTVTG---PLDH 183
Query: 207 ALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGL-YPNADPILPSRSVP 265
+ AI I+ K S ED+ PP++ P +P GL +P S P
Sbjct: 184 QMRAIYLILSKLS--EDV-------HYPPNLSSP-----FPYAGLGFP---------SYP 220
Query: 266 SILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFN-------- 317
+ +P + Y + N P +G G Q+ + + P N
Sbjct: 221 GVPVGYMIPQVP-YNNAVNYGP---------NGYGGRYQNNKPSTPMRSPANNDAQDSLT 270
Query: 318 ------KIGRVIGKGGGTIKSIRQASGAQIDVDDTKD 348
IG V+G+ G I I QASGA+I + D D
Sbjct: 271 IGIADEHIGAVVGRAGRNITEIIQASGARIKISDRGD 307
>gi|431913482|gb|ELK15157.1| Poly(rC)-binding protein 4 [Pteropus alecto]
Length = 403
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 155/329 (47%), Gaps = 52/329 (15%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
L +R+L ++G +IGK G T+K IR+ S A+I + + + E + T+T
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE--GSCPERITTITGS------T 69
Query: 368 SMAVEAVLLLQTKINDEDDDT------------VTIRLLVSSKVIGCIIGKSGSIINEIR 415
+ AV ++ K+ DED + VT+RL++ + G +IGK+G+ I EIR
Sbjct: 70 AAVFHAVSMIAFKL-DEDLCSATANGGNISRPPVTLRLVIPASQCGSLIGKAGTKIKEIR 128
Query: 416 KRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPP 475
+ T A V+++ P ++ + V V G V DA++ + ++ L+ +PP
Sbjct: 129 ETTGAQVQVAGDLLP---NSTERAVTVSG----VPDAIILCVRQICAVILE------SPP 175
Query: 476 VGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSP 535
GA Y +S+ +L L +Q G ++ + + LS P
Sbjct: 176 KGATIPYHPS--LSLGTVL--------LSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVP 225
Query: 536 YGSMSSYSSKLYGGLPPPL---TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDS 592
+ S + GL P + E LVP + +G VIG+ GS ++ IR++SGA I++ +
Sbjct: 226 FAS-----PGMVPGLDPGAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQ 280
Query: 593 KSSRGDRVALISGTPEQKRAAENLIQAFI 621
G+R I+G+P A+ LI A +
Sbjct: 281 AEGAGERHVTITGSPVSIALAQYLITACL 309
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 137/333 (41%), Gaps = 51/333 (15%)
Query: 28 KDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIY 87
++E G ++ R+L +GS+IGK G+ + IR+++ AR+ + + +R+ TI
Sbjct: 9 EEEPGLSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE--GSCPERITTIT 66
Query: 88 SHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVP 147
F E LC+A + + ++++P
Sbjct: 67 GSTAAVFHAVSMIAFKLDEDLCSA-----------------TANGGNISRPPVTLRLVIP 109
Query: 148 SSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKA 207
+SQ ++IGKAG IK +R T ++V T + V +SG +A+
Sbjct: 110 ASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNST-------ERAVTVSGVPDAIILC 162
Query: 208 LFAISAIMYKFSPR-EDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPS 266
+ I A++ + P+ IP ++ ++ S + G Y P
Sbjct: 163 VRQICAVILESPPKGATIPYHPSLSLG---TVLLSANQGFSVQGQYGAVTP--------- 210
Query: 267 ILGAARVPDLQGYADTGNTWPVYSTGLSLVSGL-VGASQSEELVIRVLCPFNKIGRVIGK 325
A V LQ +G+ P S G +V GL GA S + L P + IG VIG+
Sbjct: 211 ----AEVTKLQQL--SGHAVPFASPG--MVPGLDPGAQTSSQ---EFLVPNDLIGCVIGR 259
Query: 326 GGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
G I IRQ SGA I + + + E +T+T
Sbjct: 260 QGSKISEIRQMSGAHIKIGNQAEGAGERHVTIT 292
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 9/92 (9%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+T+R+L+ K +G IIGK G + IR+++ A + IS+G P + + + G
Sbjct: 17 TLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCP------ERITTITGSTA 70
Query: 448 SVRDALVQIILRLRDDALKDRDGSRN---PPV 476
+V A+ I +L +D N PPV
Sbjct: 71 AVFHAVSMIAFKLDEDLCSATANGGNISRPPV 102
>gi|169617928|ref|XP_001802378.1| hypothetical protein SNOG_12147 [Phaeosphaeria nodorum SN15]
gi|111059439|gb|EAT80559.1| hypothetical protein SNOG_12147 [Phaeosphaeria nodorum SN15]
Length = 485
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 102/392 (26%), Positives = 172/392 (43%), Gaps = 75/392 (19%)
Query: 285 TWPVYSTGLSLVSGLVGASQSEE---LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQI 341
T P+ ST + L + Q +E L +R ++ +IGKGG + IR+ SGA+
Sbjct: 101 TQPIQSTSGANGRPLSHSQQVDETNWLHLRACIGTSEAATIIGKGGENVTQIRRLSGAKC 160
Query: 342 DVDDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKINDED--------DDTVTIRL 393
V D E ++TV+ + +++ L+++T +N ED +RL
Sbjct: 161 TVSDYSRGAVERILTVSG-----QVDAVSKAFGLIVRT-LNQEDLEAPSTSTSKAYPMRL 214
Query: 394 LVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDAL 453
L+ +IG IIGK+G I EI++ + A + S P ++ + + V+G +V A+
Sbjct: 215 LIPHILIGSIIGKAGVRIREIQEASNAKLNASDTLLP---NSGERSLVVLGVADAVHIAV 271
Query: 454 VQIILRLRDDALKDRDGSRNPPVGADHIYSSGT-------GISMPPLLPSIPPVG----- 501
+ L + L +R G P + + SG G+S+ P +P P G
Sbjct: 272 YYVAQTLVEQ-LTERFGG---PAASQYATRSGMAANVVPGGMSVQPYVPQ--PAGGQYQQ 325
Query: 502 PLGY----DQRADSGSGIGMLS--------SSSLYG-----YGSLSMGDSPYGSMSSYSS 544
P + QR + G G S YG YG+ S G + YG
Sbjct: 326 PNNFRRQEPQRTPAHGGYGAAPHMQPGAPVHPSPYGQPQMPYGAGSPGRAHYGGPPQQPG 385
Query: 545 KLYG---------GLPP----------PLTLEVLVPANAVGKVIGKAGSNLANIRKISGA 585
YG G PP PLT ++ +P + VG +IGK G+ + IR++SG+
Sbjct: 386 P-YGAPQGAPVPHGGPPNQPPVSMPGQPLTQQIFIPNDMVGAIIGKGGAKINEIRQLSGS 444
Query: 586 TIEMSDSKSSRGDRVALISGTPEQKRAAENLI 617
I++++ + +R+ I+GT E + A ++
Sbjct: 445 VIKINEPTDNSNERLVTITGTQECNQMALYML 476
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 34/52 (65%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTI 86
+ + +I P+ ++G++IGK G IN IRQ + + +K+ +P + +R+VTI
Sbjct: 411 QPLTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPTDNSNERLVTI 462
>gi|57093423|ref|XP_538537.1| PREDICTED: poly(rC)-binding protein 1 isoform 1 [Canis lupus
familiaris]
Length = 356
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 157/347 (45%), Gaps = 50/347 (14%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
L IR+L ++G +IGK G ++K IR+ SGA+I++ + N E +IT+T P +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIITLTG---PTNAI 68
Query: 368 SMAVEAVL-LLQTKINDEDDDT-------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
A ++ L+ IN ++ VT+RL+V + G +IGK G I EIR+ T
Sbjct: 69 FKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTG 128
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGS-------- 471
A V+++ P ++ + + + G SV + + QI L + + + G
Sbjct: 129 AQVQVAGDMLP---NSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQP 185
Query: 472 --RNPPV----GADHI-----YSSGTG-ISMPPL-------LPSIPPVGPLGYDQRADSG 512
+ PV G D Y T + PPL +I P+ +Q A
Sbjct: 186 MPASSPVICAGGQDRCGDAAGYPHATHDLEGPPLDAYSIQGQHTISPLDLAKLNQVARQQ 245
Query: 513 SGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKA 572
S M+ + G+ + DS + Y + L T E+ +P N +G +IG+
Sbjct: 246 SHFAMMHGGT--GFAGI---DSSSPEVKGYWASLDAST--QTTHELTIPNNLIGCIIGRQ 298
Query: 573 GSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQA 619
G+N+ IR++SGA I++++ R I+G+ A+ LI A
Sbjct: 299 GANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLINA 345
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 82/366 (22%), Positives = 146/366 (39%), Gaps = 79/366 (21%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH 89
E G ++ R+L +GS+IGK G+ + IR+E+ AR+ + + +R++T
Sbjct: 7 ESGLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIIT---- 60
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAV-----ANATDNDKKRKEKEECQI 144
L +A+ K A I + + ++ T++ + ++
Sbjct: 61 ------------------LTGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRL 102
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAV 204
+VP++Q ++IGK G IK +R T ++V T + + I+G ++V
Sbjct: 103 VVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNST-------ERAITIAGVPQSV 155
Query: 205 KKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGL--------YPNAD 256
+ + I +M + + T+ P +P+ P+ GG YP+A
Sbjct: 156 TECVKQICLVMLETLSQSPQGRVMTIPYQP----MPASSPVICAGGQDRCGDAAGYPHAT 211
Query: 257 PIL--PSRSVPSILGAARVPDL---------------------QGYADTGNTWPVYSTGL 293
L P SI G + L G+A ++ P
Sbjct: 212 HDLEGPPLDAYSIQGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVK--- 268
Query: 294 SLVSGLVGASQ-SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDE 352
+ L ++Q + EL I P N IG +IG+ G I IRQ SGAQI + + +
Sbjct: 269 GYWASLDASTQTTHELTI----PNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSG 324
Query: 353 CVITVT 358
+T+T
Sbjct: 325 RQVTIT 330
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 9/92 (9%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+TIRLL+ K +G IIGK G + IR+ + A + IS+G+ P + ++ + G
Sbjct: 13 TLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCP------ERIITLTGPTN 66
Query: 448 SVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
++ A II +L +D ++ + + PPV
Sbjct: 67 AIFKAFAMIIDKLEEDINSSMTNSTAASRPPV 98
>gi|392884376|gb|AFM91020.1| poly(rC) binding protein 3, isoform CRAb [Callorhinchus milii]
Length = 349
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 153/339 (45%), Gaps = 42/339 (12%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDD-- 365
L IR+L ++G +IGK G T+K +R SGA+I++ + N E ++T+T P D
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMRVESGARINISE--GNCPERIVTITG---PTDAI 68
Query: 366 IKSMAVEAVLLLQTKINDEDDDT-------VTIRLLVSSKVIGCIIGKSGSIINEIRKRT 418
K+ A+ A + IN+ ++ VT+RL+V + G +IGK GS I EIR+ T
Sbjct: 69 FKAFAMIA-FKFEEDINNSMTNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIREST 127
Query: 419 KADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNP-PVG 477
A V+++ P ++ + V + G ++ + QI + + + K P P
Sbjct: 128 GAQVQVAGDMLP---NSTERAVTISGMPDAIIQCVKQICVVMLESPPKGATIPYRPKPAS 184
Query: 478 ADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYG 537
A I++ G ++ P D + +S+L+ L+ S
Sbjct: 185 APVIFAGGQAYTIQGQYAIPHP------DDACLLSAEYKTALTSTLWRSPQLAHPSSQLK 238
Query: 538 SMSSYSSKLYGGL-----------------PPPLTLEVLVPANAVGKVIGKAGSNLANIR 580
+ L G + P T E+ +P + +G +IG+ G+ + IR
Sbjct: 239 EAAWRPESLRGKMELKNCNEESENWGMDANPQASTHELTIPNDLIGCIIGRQGTKINEIR 298
Query: 581 KISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQA 619
++SGA I+++++ +R I+G+P A+ LI A
Sbjct: 299 QMSGAQIKIANATEGSTERQITITGSPANISLAQYLINA 337
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 94/373 (25%), Positives = 145/373 (38%), Gaps = 87/373 (23%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH 89
E G ++ R+L +GS+IGK G+ + +R E+ AR+ + + +R+VTI
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMRVESGARINISEG--NCPERIVTIT-- 62
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVA-----NATDNDKKRKEKEECQI 144
DA+ K A IA + T++ K ++
Sbjct: 63 --------------------GPTDAIFKAFAMIAFKFEEDINNSMTNSPATSKPPVTLRL 102
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAV 204
+VP+SQ ++IGK G+ IK +R T ++V T + V ISG +A+
Sbjct: 103 VVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNST-------ERAVTISGMPDAI 155
Query: 205 KKALFAISAIMYKFSPR-EDIPLETTVREAPPSIIIPSDVPIYPPGGLY--PNAD----- 256
+ + I +M + P+ IP AP +I + Y G Y P+ D
Sbjct: 156 IQCVKQICVVMLESPPKGATIPYRPKPASAP---VIFAGGQAYTIQGQYAIPHPDDACLL 212
Query: 257 ---------------PILPSRSVPSILGAARVPDLQGYADTGN------TWPVYSTGLSL 295
P L S A R L+G + N W
Sbjct: 213 SAEYKTALTSTLWRSPQLAHPSSQLKEAAWRPESLRGKMELKNCNEESENW--------- 263
Query: 296 VSGLVGASQ--SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDEC 353
G+ Q + EL I P + IG +IG+ G I IRQ SGAQI + + + E
Sbjct: 264 --GMDANPQASTHELTI----PNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSTER 317
Query: 354 VITVTAIESPDDI 366
IT+T SP +I
Sbjct: 318 QITITG--SPANI 328
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 9/92 (9%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+TIRLL+ K +G IIGK G + ++R + A + IS+G+ P + +V + G
Sbjct: 13 TLTIRLLMHGKEVGSIIGKKGETVKKMRVESGARINISEGNCP------ERIVTITGPTD 66
Query: 448 SVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
++ A I + +D ++ + + PPV
Sbjct: 67 AIFKAFAMIAFKFEEDINNSMTNSPATSKPPV 98
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Query: 10 SQRDNDRDGKNQKRRINEKDEK----GNEESVIYRILCPDGVIGSVIGKSGKVINSIRQE 65
+ R GK + + NE+ E N ++ + + P+ +IG +IG+ G IN IRQ
Sbjct: 241 AWRPESLRGKMELKNCNEESENWGMDANPQASTHELTIPNDLIGCIIGRQGTKINEIRQM 300
Query: 66 TRARVKVVDPFPGAKDRVVTI 86
+ A++K+ + G+ +R +TI
Sbjct: 301 SGAQIKIANATEGSTERQITI 321
Score = 39.3 bits (90), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 383 DEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEV 442
D + T L + + +IGCIIG+ G+ INEIR+ + A ++I+ + + + + +
Sbjct: 266 DANPQASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE----GSTERQITI 321
Query: 443 VGEVGSVRDALVQIILRLRDD 463
G ++ A I RL +
Sbjct: 322 TGSPANISLAQYLINARLTSE 342
>gi|410227970|gb|JAA11204.1| poly(rC) binding protein 1 [Pan troglodytes]
Length = 356
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 158/349 (45%), Gaps = 54/349 (15%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
L IR+L ++G +IGK G ++K IR+ SGA+I++ + N E +IT+T P +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIITLTG---PTNAI 68
Query: 368 SMAVEAVL-LLQTKINDEDDDT-------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
A ++ L+ IN ++ VT+RL+V + G +IGK G I EIR+ T
Sbjct: 69 FKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTG 128
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGS-------- 471
A V+++ P ++ + + + G SV + + QI L + + + G
Sbjct: 129 AQVQVAGDMLP---NSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQP 185
Query: 472 --RNPPV----GADHI-----YSSGTG-ISMPPL-------LPSIPPVGPLGYDQRADSG 512
+ PV G D Y T + PPL +I P+ +Q A
Sbjct: 186 MPASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISPLDLAKLNQVARQQ 245
Query: 513 SGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGL--PPPLTLEVLVPANAVGKVIG 570
S M+ + G+ + DS + Y + GL T E+ +P N +G +IG
Sbjct: 246 SHFAMMHGGT--GFAGI---DSSSPEVKGY----WAGLDASTQTTHELTIPNNLIGCIIG 296
Query: 571 KAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQA 619
+ G+N+ IR++SGA I++++ R I+G+ A+ LI A
Sbjct: 297 RQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLINA 345
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 83/366 (22%), Positives = 147/366 (40%), Gaps = 79/366 (21%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH 89
E G ++ R+L +GS+IGK G+ + IR+E+ AR+ + + +R++T
Sbjct: 7 ESGLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIIT---- 60
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAV-----ANATDNDKKRKEKEECQI 144
L +A+ K A I + + ++ T++ + ++
Sbjct: 61 ------------------LTGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRL 102
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAV 204
+VP++Q ++IGK G IK +R T ++V T + + I+G ++V
Sbjct: 103 VVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNST-------ERAITIAGVPQSV 155
Query: 205 KKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGL--------YPNAD 256
+ + I +M + + T+ P +P+ P+ GG YP+A
Sbjct: 156 TECVKQICLVMLETLSQSPQGRVMTIPYQP----MPASSPVICAGGQDRCSDAAGYPHAT 211
Query: 257 PIL--PSRSVPSILGAARVPDL---------------------QGYADTGNTWPVYSTGL 293
L P SI G + L G+A ++ P
Sbjct: 212 HDLEGPPLDAYSIQGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVK--- 268
Query: 294 SLVSGLVGASQ-SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDE 352
+GL ++Q + EL I P N IG +IG+ G I IRQ SGAQI + + +
Sbjct: 269 GYWAGLDASTQTTHELTI----PNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSG 324
Query: 353 CVITVT 358
+T+T
Sbjct: 325 RQVTIT 330
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 9/92 (9%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+TIRLL+ K +G IIGK G + IR+ + A + IS+G+ P + ++ + G
Sbjct: 13 TLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCP------ERIITLTGPTN 66
Query: 448 SVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
++ A II +L +D ++ + + PPV
Sbjct: 67 AIFKAFAMIIDKLEEDINSSMTNSTAASRPPV 98
>gi|449509689|ref|XP_002192903.2| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
[Taeniopygia guttata]
Length = 531
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 158/338 (46%), Gaps = 43/338 (12%)
Query: 301 GASQSEEL--VIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
G+ Q ++L +R+L P +G +IGK G TIK++ + + +++D+ K+N +T
Sbjct: 108 GSWQPKQLDFPLRMLVPTQFVGAIIGKEGLTIKNLTKQTQSKVDIHR-KENAGAAEKPIT 166
Query: 359 AIESPDDIKSMAVEAVLLLQTKINDEDD--DTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
+P+ S A +L + K DE + V +++L + ++G +IGK G + +I +
Sbjct: 167 IHATPEGC-SEACRMILDIMQKEADETKSAEEVPLKILAHNSLVGRLIGKEGRNLKKIEQ 225
Query: 417 RTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKD-----RDGS 471
T + IS + + + V G + +A V+I+ +LR+ D + +
Sbjct: 226 DTGTKITISPLQDLTIYNP-ERTITVKGSTEACSNAEVEIMKKLREAYENDVVAVNQQAN 284
Query: 472 RNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSM 531
P + + TG+SM LPS P G +++ + + S
Sbjct: 285 LIPGLNLSALGIFSTGLSM---LPSTP--------------GARGAAAATPYHPFAQQS- 326
Query: 532 GDSPYGSMSSYSSKLYGG-----------LPPPLTLEVLVPANAVGKVIGKAGSNLANIR 580
G GS S+Y S LYG LP + + +P AVG +IGK G ++ +
Sbjct: 327 GRRRTGS-SAYLSSLYGAPPAGAFPHQHPLPEQEVVNLFIPTQAVGAIIGKKGQHIKQLA 385
Query: 581 KISGATIEMSDSKS-SRGDRVALISGTPEQKRAAENLI 617
+ +GA+I+++ ++ +R+ +I+G PE + A+ I
Sbjct: 386 RFAGASIKIAPAEGPDASERMVIITGPPEAQFKAQGRI 423
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 103/459 (22%), Positives = 191/459 (41%), Gaps = 81/459 (17%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKEDVEV 98
R+L P +G++IGK G I ++ ++T+++V + GA ++ +TI++
Sbjct: 120 RMLVPTQFVGAIIGKEGLTIKNLTKQTQSKVDIHRKENAGAAEKPITIHA---------- 169
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
E A +L + A ++ K E+ +IL +S +IGK
Sbjct: 170 -----TPEGCSEACRMILDIMQKEA--------DETKSAEEVPLKILAHNSLVGRLIGKE 216
Query: 159 GATIKRLRSKTRTSIKVTP-KDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYK 217
G +K++ T T I ++P +D + + + + G +EA A IM K
Sbjct: 217 GRNLKKIEQDTGTKITISPLQDLT------IYNPERTITVKGSTEACSNAEV---EIMKK 267
Query: 218 FSPREDIPLETTVREAPPSIIIPSDVPIYPPG------GLYPNADPILPSRSVPSILGAA 271
RE + ++I PG G++ +LP S P GAA
Sbjct: 268 L--REAYENDVVAVNQQANLI---------PGLNLSALGIFSTGLSMLP--STPGARGAA 314
Query: 272 RVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQS----------EELVIRVLCPFNKIGR 321
+A S+ + +S L GA + E+ V+ + P +G
Sbjct: 315 AATPYHPFAQQSGRRRTGSS--AYLSSLYGAPPAGAFPHQHPLPEQEVVNLFIPTQAVGA 372
Query: 322 VIGKGGGTIKSIRQASGAQIDVDDTK--DNRDECVITVTAIESPDDIKSMA---VEAVLL 376
+IGK G IK + + +GA I + + D + VI I P + + A + L
Sbjct: 373 IIGKKGQHIKQLARFAGASIKIAPAEGPDASERMVI----ITGPPEAQFKAQGRIFGKLK 428
Query: 377 LQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADAN 436
+ N +++ + + V S G +IGK G +NE++ T A+V + + P D N
Sbjct: 429 EENFFNPKEEVKLEAHIKVPSFAAGRVIGKGGKTVNELQNLTSAEVIVPRDQTP---DEN 485
Query: 437 DE-LVEVVGEVGSVRDA---LVQIILRLRDDALKDRDGS 471
+E +V+++G + + A + +I+ +++ K G+
Sbjct: 486 EEVVVKIIGHFFASQTAQRKIREIVQQVKQQEHKHAQGA 524
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 59/148 (39%), Gaps = 24/148 (16%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPF-PGAKDRVVTIYSHVKDK 93
E + + P +G++IGK G+ I + + A +K+ P A +R+V I
Sbjct: 357 EQEVVNLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAEGPDASERMVII------- 409
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
+A K I + + K + K E I VPS +
Sbjct: 410 ---------------TGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIKVPSFAAGR 454
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+IGK G T+ L++ T + + P+D +
Sbjct: 455 VIGKGGKTVNELQNLTSAEV-IVPRDQT 481
>gi|340722697|ref|XP_003399740.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
isoform 1 [Bombus terrestris]
Length = 627
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 149/333 (44%), Gaps = 47/333 (14%)
Query: 297 SGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVIT 356
SG+ G+ + + +R+L +G +IG+ G TI+ I Q + A++DV KD+
Sbjct: 176 SGVSGSGRQADFPLRILVQSEMVGAIIGRQGSTIRQITQMTRARVDVHR-KDSLGAAEKA 234
Query: 357 VTAIESPDDIKSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
+T +P++ + + + + Q + +++R+L + +IG IIGK G+ I +I +
Sbjct: 235 ITIYGNPENCTNACKKIMEVTQQEAYGLSKGEISLRILAHNNLIGRIIGKGGTTIKKIMQ 294
Query: 417 RTKADVRISKGDKPKCADANDE-LVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPP 475
T D +I+ + N E ++ V G + ++ A I +LR D
Sbjct: 295 DT--DTKITVSSINDINNFNLERIITVKGSIDNMSKAESMISSKLRQSYENDLQ------ 346
Query: 476 VGADHIYSSGTGISMPP---LLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMG 532
+M P + P + P+ + S G G+ YGS G
Sbjct: 347 -------------AMAPQSLMFPGLHPMAMMSTAGMGYSSRGPGL--------YGS---G 382
Query: 533 DSPYGSMSSYSSKLYGGLPPPLTLE---VLVPANAVGKVIGKAGSNLANIRKISGAT--- 586
+PY +S ++ G+P T E + +P +VG +IG GS++ NI + SGA+
Sbjct: 383 PAPYPYQTSLPTQQ--GIPIGDTQETAFLYIPNTSVGAIIGSKGSHIRNIIRFSGASVKI 440
Query: 587 --IEMSDSKSSRGDRVALISGTPEQKRAAENLI 617
IE + DR I G+PE + A+ LI
Sbjct: 441 APIEQDKPVEQQNDRKVTIVGSPESQWKAQYLI 473
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 110/430 (25%), Positives = 185/430 (43%), Gaps = 82/430 (19%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV--DPFPGAKDRVVTIYSHVKDKEDVE 97
RIL ++G++IG+ G I I Q TRARV V D GA ++ +TIY
Sbjct: 190 RILVQSEMVGAIIGRQGSTIRQITQMTRARVDVHRKDSL-GAAEKAITIY---------- 238
Query: 98 VDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGK 157
+ E A +++V A ++ K + +IL ++ IIGK
Sbjct: 239 -----GNPENCTNACKKIMEVTQQEAYGLS---------KGEISLRILAHNNLIGRIIGK 284
Query: 158 AGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVL-----ISGESEAVKKALFAIS 212
G TIK++ T T I V S + +NF L + G + + KA IS
Sbjct: 285 GGTTIKKIMQDTDTKITV----------SSINDINNFNLERIITVKGSIDNMSKAESMIS 334
Query: 213 AIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAAR 272
+ + + S D+ AP S++ P GL+P + S + ++R
Sbjct: 335 SKLRQ-SYENDLQAM-----APQSLMFP---------GLHP-----MAMMSTAGMGYSSR 374
Query: 273 VPDLQGYADTGNTWPVYSTGLSLVSGL-VGASQSEELVIRVLCPFNKIGRVIGKGGGTIK 331
P L Y +P Y T L G+ +G +Q + P +G +IG G I+
Sbjct: 375 GPGL--YGSGPAPYP-YQTSLPTQQGIPIGDTQETAFL---YIPNTSVGAIIGSKGSHIR 428
Query: 332 SIRQASGAQIDV---DDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKINDE---- 384
+I + SGA + + + K + VT + SP+ +A L+ K+ +E
Sbjct: 429 NIIRFSGASVKIAPIEQDKPVEQQNDRKVTIVGSPES----QWKAQYLIFEKMREEGFVG 484
Query: 385 --DDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEV 442
+D +TI +LV S +G IIGK G + E+++ T + +++S+ + + V++
Sbjct: 485 GTEDVRLTIEILVPSTQVGRIIGKGGQNVRELQRVTGSIIKLSEQQSTSPSADEEATVQI 544
Query: 443 VGEVGSVRDA 452
+G SV+ A
Sbjct: 545 IGPFFSVQSA 554
Score = 46.6 bits (109), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 34/42 (80%)
Query: 554 LTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSS 595
LT+E+LVP+ VG++IGK G N+ +++++G+ I++S+ +S+
Sbjct: 491 LTIEILVPSTQVGRIIGKGGQNVRELQRVTGSIIKLSEQQST 532
>gi|351712813|gb|EHB15732.1| Poly(rC)-binding protein 1 [Heterocephalus glaber]
Length = 355
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 157/347 (45%), Gaps = 50/347 (14%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
L IR+L ++G +IGK G ++K IR+ SGA+I++ + N E +IT+T P +
Sbjct: 13 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIITLTG---PTNAI 67
Query: 368 SMAVEAVL-LLQTKINDEDDDT-------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
A ++ L+ IN ++ VT+RL+V + G +IGK G I EIR+ T
Sbjct: 68 FKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTG 127
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGS-------- 471
A V+++ P ++ + + + G SV + + QI L + + + G
Sbjct: 128 AQVQVAGDMLP---NSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQP 184
Query: 472 --RNPPV----GADHI-----YSSGTG-ISMPPL-------LPSIPPVGPLGYDQRADSG 512
+ PV G D Y T + PPL +I P+ +Q A
Sbjct: 185 MPASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISPLDLAKLNQVARQQ 244
Query: 513 SGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKA 572
S M+ + G+ + DS + Y + L T E+ +P N +G +IG+
Sbjct: 245 SHFAMMHGGT--GFAGI---DSSSPEVKGYWASLDAST--QTTHELTIPNNLIGCIIGRQ 297
Query: 573 GSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQA 619
G+N+ IR++SGA I++++ R I+G+ A+ LI A
Sbjct: 298 GANINEIRQMSGAQIKIANPVEGSSGRQITITGSAASISLAQYLINA 344
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 81/362 (22%), Positives = 145/362 (40%), Gaps = 73/362 (20%)
Query: 31 KGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHV 90
+G ++ R+L +GS+IGK G+ + IR+E+ AR+ + + +R++T
Sbjct: 7 EGLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIIT----- 59
Query: 91 KDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAV-----ANATDNDKKRKEKEECQIL 145
L +A+ K A I + + ++ T++ + +++
Sbjct: 60 -----------------LTGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLV 102
Query: 146 VPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVK 205
VP++Q ++IGK G IK +R T ++V T + + I+G ++V
Sbjct: 103 VPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNST-------ERAITIAGVPQSVT 155
Query: 206 KALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGL--------YPNADP 257
+ + I +M + + T+ P +P+ P+ GG YP+A
Sbjct: 156 ECVKQICLVMLETLSQSPQGRVMTIPYQP----MPASSPVICAGGQDRCSDAAGYPHATH 211
Query: 258 IL--PSRSVPSILGAARV-----PDLQGYADTGNTWPVYSTGLSLV-------------S 297
L P SI G + L A + + + G +
Sbjct: 212 DLEGPPLDAYSIQGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWA 271
Query: 298 GLVGASQ-SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVIT 356
L ++Q + EL I P N IG +IG+ G I IRQ SGAQI + + + IT
Sbjct: 272 SLDASTQTTHELTI----PNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQIT 327
Query: 357 VT 358
+T
Sbjct: 328 IT 329
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 9/92 (9%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+TIRLL+ K +G IIGK G + IR+ + A + IS+G+ P + ++ + G
Sbjct: 12 TLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCP------ERIITLTGPTN 65
Query: 448 SVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
++ A II +L +D ++ + + PPV
Sbjct: 66 AIFKAFAMIIDKLEEDINSSMTNSTAASRPPV 97
>gi|387017714|gb|AFJ50975.1| Poly(rC)-binding protein 2-like [Crotalus adamanteus]
Length = 347
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 162/341 (47%), Gaps = 30/341 (8%)
Query: 297 SGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVIT 356
+G++ + L IR+L ++G +IGK G ++K +R+ SGA+I++ + N E +IT
Sbjct: 3 TGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIIT 60
Query: 357 VTAIESPDDIKSMAVEAVL-LLQTKINDEDDDT-------VTIRLLVSSKVIGCIIGKSG 408
+ P + A ++ L+ I+ ++ VT+RL+V + G +IGK G
Sbjct: 61 LAG---PTNAIFKAFAMIIDKLEEDISSSMTNSTASSRPPVTLRLVVPASQCGSLIGKGG 117
Query: 409 SIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKD- 467
I EIR+ T A V+++ P ++ + + + G S+ + + QI + + + K
Sbjct: 118 CKIKEIRESTGAQVQVAGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLESPPKGV 174
Query: 468 ----RDGSRNPPV---GADHIYSSGTGISMPPLLPSIPPVGPL-GYDQRADSGSGIGMLS 519
R + PV G YSSG+ S P PS+ L G Q A + G +
Sbjct: 175 TIPYRPKPSSSPVIFAGGQDRYSSGSA-SYPHTAPSMCLNSDLEGPPQEAYTIQGQYAIP 233
Query: 520 SSSLYGYGSLSMGDSPYGSMSSYSSKLYGGL---PPPLTLEVLVPANAVGKVIGKAGSNL 576
L L+M S + MS ++ GL + E+ +P + +G +IG+ G+ +
Sbjct: 234 QPDLTKLHQLAMQQSHF-PMSHGNTGFSAGLDASAQTTSHELTIPNDLIGCIIGRQGAKI 292
Query: 577 ANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLI 617
IR++SGA I++++ DR I+G+ A+ LI
Sbjct: 293 NEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLI 333
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 82/358 (22%), Positives = 149/358 (41%), Gaps = 73/358 (20%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH 89
E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R++T
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIIT---- 60
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAV-----ANATDNDKKRKEKEECQI 144
L +A+ K A I + + ++ T++ + ++
Sbjct: 61 ------------------LAGPTNAIFKAFAMIIDKLEEDISSSMTNSTASSRPPVTLRL 102
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAV 204
+VP+SQ ++IGK G IK +R T ++V T + + I+G +++
Sbjct: 103 VVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNST-------ERAITIAGIPQSI 155
Query: 205 KKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGL---------YPNA 255
+ + I +M + P+ T+ P PS P+ GG YP+
Sbjct: 156 IECVKQICVVMLESPPK-----GVTIPYRPK----PSSSPVIFAGGQDRYSSGSASYPHT 206
Query: 256 DPIL--------PSRSVPSILGAARVPD-----LQGYADTGNTWPVYSTGLSLVSGLVGA 302
P + P + +I G +P L A + +P+ +GL +
Sbjct: 207 APSMCLNSDLEGPPQEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMSHGNTGFSAGLDAS 266
Query: 303 SQ--SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
+Q S EL I P + IG +IG+ G I IRQ SGAQI + + + + +T+T
Sbjct: 267 AQTTSHELTI----PNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTIT 320
>gi|350424346|ref|XP_003493765.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Bombus impatiens]
Length = 626
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 151/334 (45%), Gaps = 49/334 (14%)
Query: 297 SGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVIT 356
SG+ G+ + + +R+L +G +IG+ G TI+ I Q + A++DV KD+
Sbjct: 176 SGVSGSGRQADFPLRILVQSEMVGAIIGRQGSTIRQITQMTRARVDVHR-KDSLGAAEKA 234
Query: 357 VTAIESPDDIKSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
+T +P++ + + + + Q + +++R+L + +IG IIGK G+ I +I +
Sbjct: 235 ITIYGNPENCTNACKKIMEVTQQEAYGLSKGEISLRILAHNNLIGRIIGKGGTTIKKIMQ 294
Query: 417 RTKADVRISKGDKPKCADANDE-LVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPP 475
T D +I+ + N E ++ V G + ++ A I +LR D
Sbjct: 295 DT--DTKITVSSINDINNFNLERIITVKGSIDNMSKAESMISSKLRQSYENDLQ------ 346
Query: 476 VGADHIYSSGTGISMPP---LLPSIPPVGPLGYDQRADSGSGIGMLSSS-SLYGYGSLSM 531
+M P + P + P+ + S +G+G S LYG
Sbjct: 347 -------------AMAPQSLMFPGLHPMAMM-------STAGMGYSSRGPGLYG-----T 381
Query: 532 GDSPYGSMSSYSSKLYGGLPPPLTLE---VLVPANAVGKVIGKAGSNLANIRKISGAT-- 586
G +PY +S ++ G+P T E + +P +VG +IG GS++ NI + SGA+
Sbjct: 382 GPAPYPYQTSLPTQQ--GIPIGDTQETAFLYIPNTSVGAIIGSKGSHIRNIIRFSGASVK 439
Query: 587 ---IEMSDSKSSRGDRVALISGTPEQKRAAENLI 617
IE + DR I G+PE + A+ LI
Sbjct: 440 IAPIEQDKPVEQQNDRKVTIVGSPESQWKAQYLI 473
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 111/430 (25%), Positives = 185/430 (43%), Gaps = 82/430 (19%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV--DPFPGAKDRVVTIYSHVKDKEDVE 97
RIL ++G++IG+ G I I Q TRARV V D GA ++ +TIY
Sbjct: 190 RILVQSEMVGAIIGRQGSTIRQITQMTRARVDVHRKDSL-GAAEKAITIY---------- 238
Query: 98 VDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGK 157
+ E A +++V A ++ K + +IL ++ IIGK
Sbjct: 239 -----GNPENCTNACKKIMEVTQQEAYGLS---------KGEISLRILAHNNLIGRIIGK 284
Query: 158 AGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVL-----ISGESEAVKKALFAIS 212
G TIK++ T T I V S + +NF L + G + + KA IS
Sbjct: 285 GGTTIKKIMQDTDTKITV----------SSINDINNFNLERIITVKGSIDNMSKAESMIS 334
Query: 213 AIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAAR 272
+ + + S D+ AP S++ P GL+P + S + ++R
Sbjct: 335 SKLRQ-SYENDLQAM-----APQSLMFP---------GLHP-----MAMMSTAGMGYSSR 374
Query: 273 VPDLQGYADTGNTWPVYSTGLSLVSGL-VGASQSEELVIRVLCPFNKIGRVIGKGGGTIK 331
P L G TG Y T L G+ +G +Q + P +G +IG G I+
Sbjct: 375 GPGLYG---TGPAPYPYQTSLPTQQGIPIGDTQETAFL---YIPNTSVGAIIGSKGSHIR 428
Query: 332 SIRQASGAQIDV---DDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKINDE---- 384
+I + SGA + + + K + VT + SP+ +A L+ K+ +E
Sbjct: 429 NIIRFSGASVKIAPIEQDKPVEQQNDRKVTIVGSPES----QWKAQYLIFEKMREEGFVG 484
Query: 385 --DDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEV 442
+D +TI +LV S +G IIGK G + E+++ T + +++S+ + + V++
Sbjct: 485 GTEDVRLTIEILVPSTQVGRIIGKGGQNVRELQRVTGSIIKLSEQQSTSPSADEEATVQI 544
Query: 443 VGEVGSVRDA 452
+G SV+ A
Sbjct: 545 IGPFFSVQSA 554
Score = 46.6 bits (109), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 34/42 (80%)
Query: 554 LTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSS 595
LT+E+LVP+ VG++IGK G N+ +++++G+ I++S+ +S+
Sbjct: 491 LTIEILVPSTQVGRIIGKGGQNVRELQRVTGSIIKLSEQQST 532
>gi|410900550|ref|XP_003963759.1| PREDICTED: poly(rC)-binding protein 3-like [Takifugu rubripes]
Length = 434
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 149/332 (44%), Gaps = 54/332 (16%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
L +R+L ++G +IGK G T+K +R+ SGA+I++ + + E ++T+T
Sbjct: 17 LTLRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GSSPERIVTITG-------- 66
Query: 368 SMAVEAVL----LLQTKINDE-----------DDDTVTIRLLVSSKVIGCIIGKSGSIIN 412
A EA+ ++ K ++ VT+RL+ G +IGK GS I
Sbjct: 67 --ATEAIFRAFAMIAQKFEEDISAAMSNSSVTSKPPVTLRLVFPGSQCGSLIGKGGSKIK 124
Query: 413 EIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSR 472
EIR+ T A V+++ GD D+ + V + G A+ Q + + L+
Sbjct: 125 EIRETTGAQVQVA-GDM--LPDSTERAVTISG----TPQAITQCVRHICSVMLE------ 171
Query: 473 NPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGS--GIGMLSSSSLYGYGSLS 530
+PP GA Y P ++ L Q A + + G + L L+
Sbjct: 172 SPPKGATIPYR--------PKAVTVGVHAVLAPQQSAHAFAIPGQYTFAHQDLTKLHQLA 223
Query: 531 MGDSPYGSMSSYSSKLYGGL---PPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATI 587
M P S+ S+ + GL P + E+ +P + +G +IG+ GS + IR++SGA I
Sbjct: 224 MQHIPLPSLGQ-SNPTFPGLDPSAPTSSQEMAIPNDFIGCIIGRQGSKINEIRQVSGAHI 282
Query: 588 EMSDSKSSRGDRVALISGTPEQKRAAENLIQA 619
+++ + R I+G+P A+ LI A
Sbjct: 283 KIASTTDGSAVRQVTITGSPASINVAQYLINA 314
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 83/367 (22%), Positives = 152/367 (41%), Gaps = 67/367 (18%)
Query: 25 INEKDEKGNEESV----IYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAK 80
+++K+E ++ S+ R+L +GS+IGK G+ + +R+E+ AR+ + + +
Sbjct: 1 MSDKEEMSSDGSLNVTLTLRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--SSP 58
Query: 81 DRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAV-----ANATDNDKK 135
+R+VTI A +A+ + A IA A +++
Sbjct: 59 ERIVTI----------------------TGATEAIFRAFAMIAQKFEEDISAAMSNSSVT 96
Query: 136 RKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFV 195
K +++ P SQ ++IGK G+ IK +R T ++V + T + V
Sbjct: 97 SKPPVTLRLVFPGSQCGSLIGKGGSKIKEIRETTGAQVQVAGDMLPDST-------ERAV 149
Query: 196 LISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNA 255
ISG +A+ + + I ++M E P T+ P ++ + + P + A
Sbjct: 150 TISGTPQAITQCVRHICSVML-----ESPPKGATIPYRPKAVTVGVHAVLAPQQSAHAFA 204
Query: 256 DP---ILPSRSVPSI--LGAARVPDLQGYADTGNTWPVYSTGLSLVSGL--VGASQSEEL 308
P + + + L +P L + T+P GL + S+E+
Sbjct: 205 IPGQYTFAHQDLTKLHQLAMQHIP-LPSLGQSNPTFP----------GLDPSAPTSSQEM 253
Query: 309 VIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKS 368
I P + IG +IG+ G I IRQ SGA I + T D +T+T + ++
Sbjct: 254 AI----PNDFIGCIIGRQGSKINEIRQVSGAHIKIASTTDGSAVRQVTITGSPASINVAQ 309
Query: 369 MAVEAVL 375
+ A L
Sbjct: 310 YLINASL 316
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 9/92 (9%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+T+RLL+ K +G IIGK G + ++R+ + A + IS+G P + +V + G
Sbjct: 16 TLTLRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGSSP------ERIVTITGATE 69
Query: 448 SVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
++ A I + +D A+ + + PPV
Sbjct: 70 AIFRAFAMIAQKFEEDISAAMSNSSVTSKPPV 101
Score = 40.0 bits (92), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 8/75 (10%)
Query: 548 GGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTP 607
G L LTL +L+ VG +IGK G + +R+ SGA I +S+ S +R+ I+G
Sbjct: 11 GSLNVTLTLRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGSSP--ERIVTITG-- 66
Query: 608 EQKRAAENLIQAFIM 622
A E + +AF M
Sbjct: 67 ----ATEAIFRAFAM 77
>gi|222623934|gb|EEE58066.1| hypothetical protein OsJ_08922 [Oryza sativa Japonica Group]
Length = 313
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 150/326 (46%), Gaps = 39/326 (11%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD---NRDECVITVTAIESPDDI 366
+R L G +IGKGG TI + SGA+I + + + ++ +I V+ + + I
Sbjct: 13 LRFLVSNTAAGCIIGKGGSTINEFQSQSGARIQLSRSHEFFPGTNDRIIMVSGLFD-EVI 71
Query: 367 KSMA-VEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRIS 425
K+M + LL + + ++E + +RL+V + G IIGK GS I + + A ++IS
Sbjct: 72 KAMELILEKLLAEGEESNEAEARPKVRLVVPNSSCGGIIGKGGSTIKSFIEDSHAGIKIS 131
Query: 426 KGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSG 485
D +D LV V G + A+ I+ +L +D + S P A + S
Sbjct: 132 PQDN-NFVGLHDRLVTVTGPLDHQMRAIYLILSKLSEDVHYPPNLSSPFPY-AGLGFPSY 189
Query: 486 TGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSK 545
G+ + ++P +P Y+ + G GYG + P M S ++
Sbjct: 190 PGVPVGYMIPQVP------YNNAVNYGPN----------GYGGRYQNNKPSTPMRSPANN 233
Query: 546 LYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVA---- 601
+L + + +G V+G+AG N+ I + SGA I++SD RGD +A
Sbjct: 234 -----DAQDSLTIGIADEHIGAVVGRAGRNITEIIQASGARIKISD----RGDFIAGTSE 284
Query: 602 ---LISGTPEQKRAAENLIQAFIMAT 624
I+GT E +AAE++I + A+
Sbjct: 285 RKVTITGTSEAIQAAESMIMQRVTAS 310
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 86/372 (23%), Positives = 153/372 (41%), Gaps = 87/372 (23%)
Query: 25 INEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV---DPFPGAKD 81
++++D+K E+ R L + G +IGK G IN + ++ AR+++ + FPG D
Sbjct: 1 MSKRDDK--EKPTHLRFLVSNTAAGCIIGKGGSTINEFQSQSGARIQLSRSHEFFPGTND 58
Query: 82 RVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEE 141
R++ + D ++K I + + + + + +
Sbjct: 59 RIIMV----------------------SGLFDEVIKAMELILEKLLAEGEESNEAEARPK 96
Query: 142 CQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGES 201
+++VP+S IIGK G+TIK + IK++P+D ++ D V ++G
Sbjct: 97 VRLVVPNSSCGGIIGKGGSTIKSFIEDSHAGIKISPQD-----NNFVGLHDRLVTVTGPL 151
Query: 202 EAVKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGL-YPNADPILP 260
+ +A++ I+ K S ED+ PP++ P +P GL +P
Sbjct: 152 DHQMRAIY---LILSKLS--EDV-------HYPPNLSSP-----FPYAGLGFP------- 187
Query: 261 SRSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFN--- 317
S P + +P + Y + N P +G G Q+ + + P N
Sbjct: 188 --SYPGVPVGYMIPQVP-YNNAVNYGP---------NGYGGRYQNNKPSTPMRSPANNDA 235
Query: 318 -----------KIGRVIGKGGGTIKSIRQASGAQIDVDDTKD---NRDECVITVTAI-ES 362
IG V+G+ G I I QASGA+I + D D E +T+T E+
Sbjct: 236 QDSLTIGIADEHIGAVVGRAGRNITEIIQASGARIKISDRGDFIAGTSERKVTITGTSEA 295
Query: 363 PDDIKSMAVEAV 374
+SM ++ V
Sbjct: 296 IQAAESMIMQRV 307
>gi|321455006|gb|EFX66153.1| hypothetical protein DAPPUDRAFT_2216 [Daphnia pulex]
Length = 388
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 145/332 (43%), Gaps = 54/332 (16%)
Query: 301 GASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAI 360
G + + +RVL +G +IG+ GGTI+ I Q + A++DV K+N +T
Sbjct: 4 GPQRQPDFPLRVLVASEMVGAIIGRQGGTIRQITQQTRARVDVHR-KENVGSLEKAITIY 62
Query: 361 ESPDDIKSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKA 420
+P++ + + ++Q + ++ + +++++L + +IG IIGK GS I + T+
Sbjct: 63 GNPENCTNACRRVLEVMQQEADNTNKGEISLKILAHNNLIGRIIGKGGSTIKRVMLETET 122
Query: 421 DVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADH 480
+ +S + + + ++ + G + ++ A I +LR D
Sbjct: 123 KITVSSLNDVSSFNM-ERVITIKGTIDNMSRAEGMISAKLRQSYESDLQ----------- 170
Query: 481 IYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGY------GSLSMGDS 534
+M P P + P+ S +GM S S+ G G G +
Sbjct: 171 --------AMAPQSMMFPGLHPMAMM------STVGMGFSPSVRGTPPAAAPGMYPPGAA 216
Query: 535 PYGSMS----SYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMS 590
PY +S LY +P +AVG +IG GS++ NI + SGA+++++
Sbjct: 217 PYAQAGPAGVGETSFLY------------IPNSAVGAIIGTRGSHIRNIIRFSGASVKIT 264
Query: 591 D-----SKSSRGDRVALISGTPEQKRAAENLI 617
+ + +R I GTPE + A+ LI
Sbjct: 265 SLPEGTTAEPQAERKVTIVGTPEAQWKAQYLI 296
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 103/431 (23%), Positives = 186/431 (43%), Gaps = 88/431 (20%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKEDVEV 98
R+L ++G++IG+ G I I Q+TRARV V G+ ++ +TIY + ++
Sbjct: 14 RVLVASEMVGAIIGRQGGTIRQITQQTRARVDVHRKENVGSLEKAITIYGNPEN------ 67
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
C +A +V + + D K + +IL ++ IIGK
Sbjct: 68 ----------CT--NACRRVLEVMQQ------EADNTNKGEISLKILAHNNLIGRIIGKG 109
Query: 159 GATIKRLRSKTRTSIKVTP-KDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYK 217
G+TIKR+ +T T I V+ D S + + + I G + + +A ISA K
Sbjct: 110 GSTIKRVMLETETKITVSSLNDVS------SFNMERVITIKGTIDNMSRAEGMISA---K 160
Query: 218 FSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQ 277
+ L+ AP S++ P GL+P A + S +G P ++
Sbjct: 161 LRQSYESDLQAM---APQSMMFP---------GLHPMA--------MMSTVGMGFSPSVR 200
Query: 278 GYADTGNTWPVYSTGLS-------LVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTI 330
G T P + G+ +G G ++ L I P + +G +IG G I
Sbjct: 201 G------TPPAAAPGMYPPGAAPYAQAGPAGVGETSFLYI----PNSAVGAIIGTRGSHI 250
Query: 331 KSIRQASGAQIDVDDTKDNRD---ECVITVTAIESPDDIKSMAVEAVLLLQTKINDE--- 384
++I + SGA + + + + VT + +P+ +A L+ K+ +E
Sbjct: 251 RNIIRFSGASVKITSLPEGTTAEPQAERKVTIVGTPEA----QWKAQYLIFEKMREEGFM 306
Query: 385 ---DDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVE 441
+D +T+ LLV+S +G IIGK G + E+++ T + +++ + + + V
Sbjct: 307 PAGEDVRLTVELLVASSQVGRIIGKGGQNVREMQRTTSSVIKLPEQG---ASTGEETTVH 363
Query: 442 VVGEVGSVRDA 452
++G +V+ A
Sbjct: 364 IIGNFFAVQSA 374
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 78/194 (40%), Gaps = 41/194 (21%)
Query: 34 EESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAK-----DRVVTIYS 88
E S +Y P+ +G++IG G I +I + + A VK+ G +R VTI
Sbjct: 228 ETSFLY---IPNSAVGAIIGTRGSHIRNIIRFSGASVKITSLPEGTTAEPQAERKVTIVG 284
Query: 89 --HVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILV 146
+ K + ++ ++ + A +D L V ++LV
Sbjct: 285 TPEAQWKAQYLIFEKMREEGFMPAGEDVRLTV------------------------ELLV 320
Query: 147 PSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKK 206
SSQ IIGK G ++ ++ T + IK+ + AS + NF AV+
Sbjct: 321 ASSQVGRIIGKGGQNVREMQRTTSSVIKLPEQGASTGEETTVHIIGNFF-------AVQS 373
Query: 207 ALFAISAIMYKFSP 220
A I A+M + P
Sbjct: 374 AQRRIRAMMSQQQP 387
>gi|312382238|gb|EFR27763.1| hypothetical protein AND_05166 [Anopheles darlingi]
Length = 738
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 145/338 (42%), Gaps = 58/338 (17%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSM 369
+RVL +G +IG+ G TI+ I Q S A++DV KDN +T +P++ +M
Sbjct: 270 LRVLVQSEMVGAIIGRQGSTIRHITQQSRARVDVHR-KDNVGSVEKAITIYGNPENC-TM 327
Query: 370 AVEAVL-LLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGD 428
A + +L ++Q + N + + +++L + +IG IIGKSG+ I I + T + +S +
Sbjct: 328 ACKKILEVMQQEANSTNKGEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITVSSIN 387
Query: 429 KPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSGTGI 488
+ + ++ V G + ++ QI +LR D
Sbjct: 388 DISSFNL-ERIITVKGTIENMSKGESQISAKLRQSYENDLQ------------------- 427
Query: 489 SMPPLLPSIPPVGPLGYDQRAD------------------SGSGIGMLSSSSLYGYGSLS 530
++ P P + P+ A + G G + +Y +
Sbjct: 428 ALAPQSIMFPGLHPMAMMSTAGNGMGFTGRTGGGGGGGVPTAPGAGAGGAGGMYPGSNFP 487
Query: 531 MGDSPYGSMSSYSSKLYGGLPPPLTLEV------LVPANAVGKVIGKAGSNLANIRKISG 584
M P G ++ GG+PP + EV +P NAVG +IG G ++ NI + SG
Sbjct: 488 MYQPPTGGPAT------GGVPPGGSSEVQETTYLYIPNNAVGAIIGTKGLHIRNIIRFSG 541
Query: 585 ATI-----EMSDSKSSRGDRVALISGTPEQKRAAENLI 617
A++ E + + +R I GTPE + A+ LI
Sbjct: 542 ASVKIAPLEADKPQEQQTERKVTIIGTPEAQWKAQYLI 579
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 98/388 (25%), Positives = 158/388 (40%), Gaps = 83/388 (21%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDP-FPGAKDRVVTIYSHVKDKEDVEV 98
R+L ++G++IG+ G I I Q++RARV V G+ ++ +TIY
Sbjct: 271 RVLVQSEMVGAIIGRQGSTIRHITQQSRARVDVHRKDNVGSVEKAITIYG---------- 320
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEEC-QILVPSSQSANIIGK 157
+ E A +L+V AN+ + E C +IL ++ IIGK
Sbjct: 321 -----NPENCTMACKKILEVMQQEANST----------NKGEICLKILAHNNLIGRIIGK 365
Query: 158 AGATIKRLRSKTRTSIKVTP-KDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMY 216
+G TIKR+ T T I V+ D S + + + + G E + K ISA +
Sbjct: 366 SGNTIKRIMQDTDTKITVSSINDIS------SFNLERIITVKGTIENMSKGESQISAKLR 419
Query: 217 KFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNA--------------DPILPSR 262
+ + L AP SI+ P GL+P A
Sbjct: 420 QSYENDLQAL------APQSIMFP---------GLHPMAMMSTAGNGMGFTGRTGGGGGG 464
Query: 263 SVPSILGAARVPDLQGYADTGNTWPVYS--TGLSLVSGLV--GASQSEELVIRVLCPFNK 318
VP+ GA Y G+ +P+Y TG G+ G+S+ +E + P N
Sbjct: 465 GVPTAPGAGAGGAGGMYP--GSNFPMYQPPTGGPATGGVPPGGSSEVQETTY-LYIPNNA 521
Query: 319 IGRVIGKGGGTIKSIRQASGAQIDV---DDTKDNRDECVITVTAIESPDDIKSMAVEAVL 375
+G +IG G I++I + SGA + + + K + VT I +P+ +A
Sbjct: 522 VGAIIGTKGLHIRNIIRFSGASVKIAPLEADKPQEQQTERKVTIIGTPE----AQWKAQY 577
Query: 376 LLQTKINDE------DDDTVTIRLLVSS 397
L+ K+ +E DD +T+ + V S
Sbjct: 578 LIFEKMREEGFVSGTDDVRLTVEIFVPS 605
>gi|354484184|ref|XP_003504270.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 1 [Cricetulus griseus]
gi|344239809|gb|EGV95912.1| Insulin-like growth factor 2 mRNA-binding protein 2 [Cricetulus
griseus]
Length = 530
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 80/343 (23%), Positives = 154/343 (44%), Gaps = 55/343 (16%)
Query: 297 SGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVIT 356
SG ++ + +R+L P +G +IGK G TIK+I + + +++D+ K+N
Sbjct: 114 SGSSSQTRQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHR-KENSGAAEKP 172
Query: 357 VTAIESPDDIKSMAVEAVLLLQTKINDEDDDT-----VTIRLLVSSKVIGCIIGKSGSII 411
VT +P+ EA ++ + E +DT V +++L + ++G +IGK G +
Sbjct: 173 VTIHATPEGTS----EACRMILEIMQKEAEDTKLAEEVPLKILAHNGLVGRLIGKEGRNL 228
Query: 412 NEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRD----DALK- 466
+I T + IS + + + V G + + +A ++I+ +LR+ D L
Sbjct: 229 KKIEHETGTKITISSLQDLSIYNP-ERTITVKGTIDACANAEMEIMKKLREAFENDMLAV 287
Query: 467 DRDGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGY 526
++ + P + + TG+S+ P PP GP G
Sbjct: 288 NQQANLIPGLNLSALGIFSTGLSVLP-----PPAGPRGVPP------------------- 323
Query: 527 GSLSMGDSPYGSMSSYSSKLYG-----------GLPPPLTLEVLVPANAVGKVIGKAGSN 575
S+ P+ S S Y +Y P T+ + +P AVG +IGK G++
Sbjct: 324 ---SVPYHPFASHSGYFPNMYPHHHFGPFPHHHSYPEQETVNLFIPTQAVGAIIGKKGAH 380
Query: 576 LANIRKISGATIEMSDSKS-SRGDRVALISGTPEQKRAAENLI 617
+ + + +GA+I+++ ++ +R+ +I+G PE + A+ I
Sbjct: 381 IKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKAQGRI 423
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 102/433 (23%), Positives = 175/433 (40%), Gaps = 70/433 (16%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKEDVEV 98
RIL P +G++IGK G I +I ++T++RV + GA ++ VTI++
Sbjct: 128 RILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHA---------- 177
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
E A +L++ A D K E+ +IL + +IGK
Sbjct: 178 -----TPEGTSEACRMILEIMQKEAE--------DTKLAEEVPLKILAHNGLVGRLIGKE 224
Query: 159 GATIKRLRSKTRTSIKVTP-KDAS--EPTHSCAMEFDNFVLISGESEAVKKALFAISAIM 215
G +K++ +T T I ++ +D S P + ++ + E E +KK A M
Sbjct: 225 GRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGTIDACANAEMEIMKKLREAFENDM 284
Query: 216 YKFSPREDIPLETTVREAPPSIIIP----SDVPIYPPG--GLYPNADPILPSRSVPSILG 269
+ + ++ IP S + I+ G L P A P R VP
Sbjct: 285 LAVNQQANL--------------IPGLNLSALGIFSTGLSVLPPPAGP----RGVP---- 322
Query: 270 AARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGT 329
VP +A +P S E+ + + P +G +IGK G
Sbjct: 323 -PSVP-YHPFASHSGYFPNMYPHHHFGPFPHHHSYPEQETVNLFIPTQAVGAIIGKKGAH 380
Query: 330 IKSIRQASGAQIDVDDTK--DNRDECVITVTAIESPDDIKSMA---VEAVLLLQTKINDE 384
IK + + +GA I + + D + VI I P + + A + L + N +
Sbjct: 381 IKQLARFAGASIKIAPAEGPDVSERMVI----ITGPPEAQFKAQGRIFGKLKEENFFNPK 436
Query: 385 DDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDE-LVEVV 443
++ + + V S G +IGK G +NE++ T A+V + + P D N E +V ++
Sbjct: 437 EEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEVIVPRDQTP---DENAEVIVRII 493
Query: 444 GEVGSVRDALVQI 456
G + + A +I
Sbjct: 494 GHFFASQTAQRKI 506
>gi|328787572|ref|XP_393878.3| PREDICTED: IGF-II mRNA-binding protein [Apis mellifera]
gi|380027404|ref|XP_003697415.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Apis florea]
Length = 626
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 149/333 (44%), Gaps = 47/333 (14%)
Query: 297 SGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVIT 356
SG+ G+ + + +R+L +G +IG+ G TI+ I Q + A++DV KD+
Sbjct: 176 SGVSGSGRQADFPLRILVQSEMVGAIIGRQGSTIRQITQMTRARVDVHR-KDSLGAAEKA 234
Query: 357 VTAIESPDDIKSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
+T +P++ + + + + Q + +++R+L + +IG IIGK G+ I +I +
Sbjct: 235 ITIYGNPENCTNACKKIMEVTQQEAYGLSKGEISLRILAHNNLIGRIIGKGGTTIKKIMQ 294
Query: 417 RTKADVRISKGDKPKCADANDE-LVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPP 475
T D +I+ + N E ++ V G + ++ A I +LR D
Sbjct: 295 DT--DTKITVSSINDINNFNLERIITVKGSIDNMSKAESMISNKLRQSYENDLQ------ 346
Query: 476 VGADHIYSSGTGISMPP---LLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMG 532
+M P + P + P+ + S G G+ YGS G
Sbjct: 347 -------------AMAPQSLMFPGLHPMAMMSTAGMGYSSRGPGL--------YGS---G 382
Query: 533 DSPYGSMSSYSSKLYGGLPPPLTLE---VLVPANAVGKVIGKAGSNLANIRKISGAT--- 586
+PY +S ++ G+P T E + +P +VG +IG GS++ NI + SGA+
Sbjct: 383 PAPYPYQASLPTQQ--GIPIGDTQETAFLYIPNTSVGAIIGSKGSHIRNIIRFSGASVKI 440
Query: 587 --IEMSDSKSSRGDRVALISGTPEQKRAAENLI 617
IE + DR I G+PE + A+ LI
Sbjct: 441 APIEQDKPVDQQNDRKVTIVGSPESQWKAQYLI 473
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 110/436 (25%), Positives = 188/436 (43%), Gaps = 86/436 (19%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV--DPFPGAKDRVVTIYSHVKDKEDVE 97
RIL ++G++IG+ G I I Q TRARV V D GA ++ +TIY
Sbjct: 190 RILVQSEMVGAIIGRQGSTIRQITQMTRARVDVHRKDSL-GAAEKAITIY---------- 238
Query: 98 VDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGK 157
+ E A +++V A ++ K + +IL ++ IIGK
Sbjct: 239 -----GNPENCTNACKKIMEVTQQEAYGLS---------KGEISLRILAHNNLIGRIIGK 284
Query: 158 AGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVL-----ISGESEAVKKALFAIS 212
G TIK++ T T I V S + +NF L + G + + KA IS
Sbjct: 285 GGTTIKKIMQDTDTKITV----------SSINDINNFNLERIITVKGSIDNMSKAESMIS 334
Query: 213 AIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAAR 272
+ + S D+ AP S++ P GL+P + S + ++R
Sbjct: 335 NKLRQ-SYENDLQAM-----APQSLMFP---------GLHP-----MAMMSTAGMGYSSR 374
Query: 273 VPDLQGYADTGNTWPVYSTGLSLVSGL-VGASQSEELVIRVLCPFNKIGRVIGKGGGTIK 331
P L Y +P Y L G+ +G +Q + P +G +IG G I+
Sbjct: 375 GPGL--YGSGPAPYP-YQASLPTQQGIPIGDTQETAFL---YIPNTSVGAIIGSKGSHIR 428
Query: 332 SIRQASGAQIDV-----DDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKINDE-- 384
+I + SGA + + D D +++ +T+ + SP+ +A L+ K+ +E
Sbjct: 429 NIIRFSGASVKIAPIEQDKPVDQQNDRKVTI--VGSPES----QWKAQYLIFEKMREEGF 482
Query: 385 ----DDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELV 440
+D +TI +LV S +G IIGK G + E+++ T + +++S+ + + V
Sbjct: 483 VAGTEDVRLTIEILVPSTQVGRIIGKGGQNVRELQRVTGSIIKLSEQQSTSPSADEEATV 542
Query: 441 EVVGEVGSVRDALVQI 456
+++G SV+ A +I
Sbjct: 543 QIIGPFFSVQSAQRRI 558
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 34/42 (80%)
Query: 554 LTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSS 595
LT+E+LVP+ VG++IGK G N+ +++++G+ I++S+ +S+
Sbjct: 491 LTIEILVPSTQVGRIIGKGGQNVRELQRVTGSIIKLSEQQST 532
>gi|225707620|gb|ACO09656.1| PolyrC-binding protein 2 [Osmerus mordax]
Length = 318
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 159/337 (47%), Gaps = 47/337 (13%)
Query: 297 SGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVIT 356
SG++ + L IR+L ++G +IGK G ++K +R+ SGA+I++ + N E +IT
Sbjct: 3 SGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIIT 60
Query: 357 V----TAIESPDDIKSMAVEAVLLLQTKINDEDDDT-------VTIRLLVSSKVIGCIIG 405
+ TAI SM +E L+ I+ ++ VT+R++V + G +IG
Sbjct: 61 LAGPTTAI---FKAFSMIIEK---LEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIG 114
Query: 406 KSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDAL 465
K G I EIR+ T A V+++ P ++ + + + G S+ + + QI + + +
Sbjct: 115 KGGCKIKEIRESTGAQVQVAGDMLP---NSTERAITIAGTPQSIIECVKQICVVMLE--- 168
Query: 466 KDRDGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYG 525
++PP G Y PS PV G A G + L
Sbjct: 169 ------QSPPKGVTIPYRPK---------PSGSPVIFAGGQAYAVQGQH--AIPQPDLTK 211
Query: 526 YGSLSMGDSPYGSMSSYSSKLYGGLPPPL---TLEVLVPANAVGKVIGKAGSNLANIRKI 582
L+M SP+ + +++ + G+ + E+ +P + +G +IG+ GS + IR++
Sbjct: 212 LHQLAMQQSPFPI--APNNQGFTGMDASAQTSSHEMTIPNDLIGCIIGRQGSKINEIRQM 269
Query: 583 SGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQA 619
SGA I++++ DR I+G+P AE LI A
Sbjct: 270 SGAQIKIANPVDGSADRQVTITGSPASISLAEYLINA 306
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 146/347 (42%), Gaps = 66/347 (19%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH 89
E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R++T
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIIT---- 60
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAV-----ANATDNDKKRKEKEECQI 144
L A+ K + I + ++ T++ K +I
Sbjct: 61 ------------------LAGPTTAIFKAFSMIIEKLEEDISSSMTNSTATSKPPVTLRI 102
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAV 204
+VP+SQ ++IGK G IK +R T ++V T + + I+G +++
Sbjct: 103 VVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNST-------ERAITIAGTPQSI 155
Query: 205 KKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSV 264
+ + I +M + SP P T+ P PS P+ GG A + ++
Sbjct: 156 IECVKQICVVMLEQSP----PKGVTIPYRPK----PSGSPVIFAGG---QAYAVQGQHAI 204
Query: 265 PSILGAARVPDL---QGYADTGNTWPVYSTGLSLVSGLVGASQ--SEELVIRVLCPFNKI 319
P PDL A + +P+ +G+ ++Q S E+ I P + I
Sbjct: 205 PQ-------PDLTKLHQLAMQQSPFPIAPNNQGF-TGMDASAQTSSHEMTI----PNDLI 252
Query: 320 GRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
G +IG+ G I IRQ SGAQI + + D + +T+T SP I
Sbjct: 253 GCIIGRQGSKINEIRQMSGAQIKIANPVDGSADRQVTITG--SPASI 297
>gi|261195190|ref|XP_002623999.1| KH domain RNA binding protein [Ajellomyces dermatitidis SLH14081]
gi|239587871|gb|EEQ70514.1| KH domain RNA binding protein [Ajellomyces dermatitidis SLH14081]
gi|239610640|gb|EEQ87627.1| KH domain RNA binding protein [Ajellomyces dermatitidis ER-3]
gi|327348926|gb|EGE77783.1| KH domain RNA binding protein [Ajellomyces dermatitidis ATCC 18188]
Length = 496
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 93/366 (25%), Positives = 163/366 (44%), Gaps = 66/366 (18%)
Query: 304 QSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESP 363
+S + IR + + IGKGG + IR+ SGA+ V D E ++TV+ ++
Sbjct: 134 ESGWIHIRAVISSAEAATCIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSGMQD- 192
Query: 364 DDIKSMAVEAVLLLQTKINDE--------DDDTVTIRLLVSSKVIGCIIGKSGSIINEIR 415
+A L+ +N+E T +RLL+ +IG IIGKSG I EI+
Sbjct: 193 -----AVAKAFGLIIRTLNNEPLEAPSTAQSKTYPLRLLIPHLLIGSIIGKSGVRIREIQ 247
Query: 416 KRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPP 475
+ + A + S P + + + ++G +V A + + L + L +R G P
Sbjct: 248 EASGARLNASDSCLPL---STERTLVILGVADAVHIATYYVAVTLVEQ-LTERFGG---P 300
Query: 476 VGADHIYSSGTG-------ISMPPLLPSIPPVGPLGYD----------QRADSGSGIGM- 517
+ + SG + + P +P P G G+ RA S G G+
Sbjct: 301 AASAYATRSGGPAGVVPGGMQVVPYIPQ-PAGGQYGHPDTFKRHQPQANRAVSTGGYGVP 359
Query: 518 -----------------LSSSSLYGY-GSLSMGDSPYGS------MSSYSSKLYGGLPP- 552
SSS GY G+ +PYG+ + +++ GG+ P
Sbjct: 360 YVHGQPGQPQMPHQALHYGSSSRPGYTGAGPHQPAPYGAPQPTQVHGAPTAQPAGGVVPG 419
Query: 553 -PLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKR 611
P+T ++ +P + VG +IGK G+ + IR +SG+ I++++ + + +R+ I+GTPE +
Sbjct: 420 APVTQQIFIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQDNSNERLVTITGTPECNQ 479
Query: 612 AAENLI 617
A ++
Sbjct: 480 MALYML 485
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 87/421 (20%), Positives = 165/421 (39%), Gaps = 94/421 (22%)
Query: 13 DNDRDGKNQKRRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKV 72
NDR + +DE G + R + + IGK G+ ++ IR+ + A+ V
Sbjct: 117 QNDRSSSQPPSQQATQDESG---WIHIRAVISSAEAATCIGKGGENVSQIRRLSGAKCTV 173
Query: 73 VDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANA--T 130
D GA +R++T+ QDA+ K I + N
Sbjct: 174 SDYSRGAVERILTV----------------------SGMQDAVAKAFGLIIRTLNNEPLE 211
Query: 131 DNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSC-AM 189
+ + ++L+P +IIGK+G I+ ++ + + +AS+ SC +
Sbjct: 212 APSTAQSKTYPLRLLIPHLLIGSIIGKSGVRIREIQEASGARL-----NASD---SCLPL 263
Query: 190 EFDNFVLISGESEAVKKALFAIS-AIMYKFSPREDIPLETTVREAPPSI---------II 239
+ ++I G ++AV A + ++ ++ + + R P + ++
Sbjct: 264 STERTLVILGVADAVHIATYYVAVTLVEQLTERFGGPAASAYATRSGGPAGVVPGGMQVV 323
Query: 240 PSDVPIYPPGGLYPNADPILPSR------------SVPSILGAARVPDL----------- 276
P +P P GG Y + D + VP + G P +
Sbjct: 324 PY-IP-QPAGGQYGHPDTFKRHQPQANRAVSTGGYGVPYVHGQPGQPQMPHQALHYGSSS 381
Query: 277 -QGYADTGNTWP----------VYSTGLSLVSGLV--GASQSEELVIRVLCPFNKIGRVI 323
GY G P V+ + +G V GA ++++ I P + +G +I
Sbjct: 382 RPGYTGAGPHQPAPYGAPQPTQVHGAPTAQPAGGVVPGAPVTQQIFI----PNDMVGAII 437
Query: 324 GKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKIND 383
GKGG I IR SG+ I +++ +DN +E ++T+T + + A+ +L +++
Sbjct: 438 GKGGAKINEIRHLSGSVIKINEPQDNSNERLVTITGTPECNQM------ALYMLYSRLES 491
Query: 384 E 384
E
Sbjct: 492 E 492
>gi|340722699|ref|XP_003399741.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
isoform 2 [Bombus terrestris]
Length = 577
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 149/333 (44%), Gaps = 47/333 (14%)
Query: 297 SGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVIT 356
SG+ G+ + + +R+L +G +IG+ G TI+ I Q + A++DV KD+
Sbjct: 126 SGVSGSGRQADFPLRILVQSEMVGAIIGRQGSTIRQITQMTRARVDVHR-KDSLGAAEKA 184
Query: 357 VTAIESPDDIKSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
+T +P++ + + + + Q + +++R+L + +IG IIGK G+ I +I +
Sbjct: 185 ITIYGNPENCTNACKKIMEVTQQEAYGLSKGEISLRILAHNNLIGRIIGKGGTTIKKIMQ 244
Query: 417 RTKADVRISKGDKPKCADANDE-LVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPP 475
T D +I+ + N E ++ V G + ++ A I +LR D
Sbjct: 245 DT--DTKITVSSINDINNFNLERIITVKGSIDNMSKAESMISSKLRQSYENDLQ------ 296
Query: 476 VGADHIYSSGTGISMPP---LLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMG 532
+M P + P + P+ + S G G+ YGS G
Sbjct: 297 -------------AMAPQSLMFPGLHPMAMMSTAGMGYSSRGPGL--------YGS---G 332
Query: 533 DSPYGSMSSYSSKLYGGLPPPLTLE---VLVPANAVGKVIGKAGSNLANIRKISGAT--- 586
+PY +S ++ G+P T E + +P +VG +IG GS++ NI + SGA+
Sbjct: 333 PAPYPYQTSLPTQQ--GIPIGDTQETAFLYIPNTSVGAIIGSKGSHIRNIIRFSGASVKI 390
Query: 587 --IEMSDSKSSRGDRVALISGTPEQKRAAENLI 617
IE + DR I G+PE + A+ LI
Sbjct: 391 APIEQDKPVEQQNDRKVTIVGSPESQWKAQYLI 423
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 110/430 (25%), Positives = 185/430 (43%), Gaps = 82/430 (19%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV--DPFPGAKDRVVTIYSHVKDKEDVE 97
RIL ++G++IG+ G I I Q TRARV V D GA ++ +TIY
Sbjct: 140 RILVQSEMVGAIIGRQGSTIRQITQMTRARVDVHRKDSL-GAAEKAITIY---------- 188
Query: 98 VDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGK 157
+ E A +++V A ++ K + +IL ++ IIGK
Sbjct: 189 -----GNPENCTNACKKIMEVTQQEAYGLS---------KGEISLRILAHNNLIGRIIGK 234
Query: 158 AGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVL-----ISGESEAVKKALFAIS 212
G TIK++ T T I V S + +NF L + G + + KA IS
Sbjct: 235 GGTTIKKIMQDTDTKITV----------SSINDINNFNLERIITVKGSIDNMSKAESMIS 284
Query: 213 AIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAAR 272
+ + + S D+ AP S++ P GL+P + S + ++R
Sbjct: 285 SKLRQ-SYENDLQAM-----APQSLMFP---------GLHP-----MAMMSTAGMGYSSR 324
Query: 273 VPDLQGYADTGNTWPVYSTGLSLVSGL-VGASQSEELVIRVLCPFNKIGRVIGKGGGTIK 331
P L Y +P Y T L G+ +G +Q + P +G +IG G I+
Sbjct: 325 GPGL--YGSGPAPYP-YQTSLPTQQGIPIGDTQETAFL---YIPNTSVGAIIGSKGSHIR 378
Query: 332 SIRQASGAQIDV---DDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKINDE---- 384
+I + SGA + + + K + VT + SP+ +A L+ K+ +E
Sbjct: 379 NIIRFSGASVKIAPIEQDKPVEQQNDRKVTIVGSPES----QWKAQYLIFEKMREEGFVG 434
Query: 385 --DDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEV 442
+D +TI +LV S +G IIGK G + E+++ T + +++S+ + + V++
Sbjct: 435 GTEDVRLTIEILVPSTQVGRIIGKGGQNVRELQRVTGSIIKLSEQQSTSPSADEEATVQI 494
Query: 443 VGEVGSVRDA 452
+G SV+ A
Sbjct: 495 IGPFFSVQSA 504
Score = 46.6 bits (109), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 34/42 (80%)
Query: 554 LTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSS 595
LT+E+LVP+ VG++IGK G N+ +++++G+ I++S+ +S+
Sbjct: 441 LTIEILVPSTQVGRIIGKGGQNVRELQRVTGSIIKLSEQQST 482
>gi|410970839|ref|XP_003991884.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 3 [Felis catus]
Length = 542
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 150/329 (45%), Gaps = 33/329 (10%)
Query: 301 GASQSEE--LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
G+SQ+ + +R+L P +G +IGK G TIK+I + + +++D+ K+N VT
Sbjct: 128 GSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHR-KENSGAAEKPVT 186
Query: 359 AIESPDDIKSMAVEAVLLLQTKINDEDD--DTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
+P+ S A +L + K DE + + +++L + ++G +IGK G + +I
Sbjct: 187 IHATPEGT-SEACRMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEH 245
Query: 417 RTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRD----DALKDRDGSR 472
T + IS + + + V G V + +A V+I+ +LR+ D L +
Sbjct: 246 ETGTKITISSLQDLSIYNP-ERTITVKGTVEACANAEVEIMKKLREAFENDMLAVNQQAN 304
Query: 473 NPP---VGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSL 529
P + A I+S+G + +PP Y A L +G
Sbjct: 305 LIPGLNLSALGIFSTGLSV-LPPPTGPRGAPPAPPYHPFATHSGYFSSLYPPHQFG---- 359
Query: 530 SMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEM 589
P+ SY P + + +P AVG +IGK G+++ + + +GA+I++
Sbjct: 360 -----PFPHHHSY--------PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI 406
Query: 590 SDSKS-SRGDRVALISGTPEQKRAAENLI 617
+ ++ +R+ +I+G PE + A+ I
Sbjct: 407 APAEGPDVSERMVIITGPPEAQFKAQGRI 435
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 89/396 (22%), Positives = 156/396 (39%), Gaps = 97/396 (24%)
Query: 142 CQILVPSSQSANIIGKAGATIKRLRSKTRT-----------------SIKVTPKDASEPT 184
+ILVP+ IIGK G TIK + +T++ +I TP+ SE
Sbjct: 139 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTSE-- 196
Query: 185 HSCAMEFDNFVLISGESEAVKKA------LFAISAIMYKFSPREDIPLETTVREAPPSII 238
+C M + ++ E++ K A + A + ++ + +E L+ E I
Sbjct: 197 -ACRMILE---IMQKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKIT 252
Query: 239 IPS--DVPIYPP-------GGLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTWP-- 287
I S D+ IY P G + A+ + + L A D+ N P
Sbjct: 253 ISSLQDLSIYNPERTITVKGTVEACANAEV---EIMKKLREAFENDMLAVNQQANLIPGL 309
Query: 288 ------VYSTGLSLV---------------------SGLVGA--------------SQSE 306
++STGLS++ SG + S E
Sbjct: 310 NLSALGIFSTGLSVLPPPTGPRGAPPAPPYHPFATHSGYFSSLYPPHQFGPFPHHHSYPE 369
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTK--DNRDECVITVTAIESPD 364
+ ++ + P +G +IGK G IK + + +GA I + + D + VI I P
Sbjct: 370 QEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVI----ITGPP 425
Query: 365 DIKSMA---VEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKAD 421
+ + A + L + N +++ + + V S G +IGK G +NE++ T A+
Sbjct: 426 EAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAE 485
Query: 422 VRISKGDKPKCADANDE-LVEVVGEVGSVRDALVQI 456
V + + P D N+E +V ++G + + A +I
Sbjct: 486 VIVPRDQTP---DENEEVIVRIIGHFFASQTAQRKI 518
Score = 45.8 bits (107), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 83/388 (21%), Positives = 152/388 (39%), Gaps = 93/388 (23%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKEDVEV 98
RIL P +G++IGK G I +I ++T++RV + GA ++ VTI++
Sbjct: 140 RILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHA---------- 189
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
E A +L++ A ++ K E+ +IL + +IGK
Sbjct: 190 -----TPEGTSEACRMILEIMQKEA--------DETKLAEEIPLKILAHNGLVGRLIGKE 236
Query: 159 GATIKRLRSKTRTSIKVTP-KDAS--EPTHSCAMEFDNFVLISGESEAVKKALFAISAIM 215
G +K++ +T T I ++ +D S P + ++ + E E +KK A M
Sbjct: 237 GRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGTVEACANAEVEIMKKLREAFENDM 296
Query: 216 YKFSPRED-IP---------LETTVREAPP------------------------SIIIPS 241
+ + + IP T + PP S+ P
Sbjct: 297 LAVNQQANLIPGLNLSALGIFSTGLSVLPPPTGPRGAPPAPPYHPFATHSGYFSSLYPPH 356
Query: 242 DVPIYPPGGLYPNADPI---LPSRSVPSILG--AARVPDLQGYADTG-----NTWPVYST 291
+P YP + + +P+++V +I+G A + L +A P S
Sbjct: 357 QFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSE 416
Query: 292 GLSLVSG-----------LVGASQSE---------ELVIRVLCPFNKIGRVIGKGGGTIK 331
+ +++G + G + E +L + P + GRVIGKGG T+
Sbjct: 417 RMVIITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVN 476
Query: 332 SIRQASGAQIDV--DDTKDNRDECVITV 357
++ + A++ V D T D +E ++ +
Sbjct: 477 ELQNLTSAEVIVPRDQTPDENEEVIVRI 504
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 58/148 (39%), Gaps = 24/148 (16%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPF-PGAKDRVVTIYSHVKDK 93
E I + P +G++IGK G I + + A +K+ P +R+V I
Sbjct: 369 EQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII------- 421
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
+A K I + + K + K E I VPSS +
Sbjct: 422 ---------------TGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGR 466
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+IGK G T+ L++ T + + P+D +
Sbjct: 467 VIGKGGKTVNELQNLTSAEV-IVPRDQT 493
>gi|58266068|ref|XP_570190.1| cytoplasm protein [Cryptococcus neoformans var. neoformans JEC21]
gi|134110914|ref|XP_775921.1| hypothetical protein CNBD3280 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50258587|gb|EAL21274.1| hypothetical protein CNBD3280 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57226423|gb|AAW42883.1| cytoplasm protein, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 365
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 92/336 (27%), Positives = 154/336 (45%), Gaps = 49/336 (14%)
Query: 306 EELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDD 365
+L +R L + G +IGK G TI +IR ++G + V + V++VT +
Sbjct: 29 HQLSLRSLVSTKEAGIIIGKSGATIATIRDSTGVKAGVSKVVQGVQDRVLSVTG--DLEG 86
Query: 366 IKSMAVE-AVLLLQTKINDED------DDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRT 418
+ S E A LLL+T ++D +IRLL+S ++G +IG+SG I +I+ +
Sbjct: 87 VASAYAEVARLLLETPLSDSSLPPPPVGSFTSIRLLISHNLMGTVIGRSGLKIKQIQDMS 146
Query: 419 KADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSR---NPP 475
A + SK P+ + + +VEV G V +++ A+++I L +D DR +P
Sbjct: 147 GARMVASKEMLPQ---STERVVEVQGSVDAIKTAVLEIGKCLLED--WDRGAGTVLYHPG 201
Query: 476 VGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSP 535
D +G G +A +GS G+ +S G+G S P
Sbjct: 202 AAGDAGVLAG------------------GLGAQAVTGSTGGIRRTSVAAGFGGYSGDRRP 243
Query: 536 Y--GSMS-----------SYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKI 582
GS+S S ++ P T + +P++ VG +IG+ GS + IR++
Sbjct: 244 SRGGSISGPSGVSGERRPSEGPQVNLNDPNLRTQNISIPSDMVGCIIGRGGSKITEIRRL 303
Query: 583 SGATIEMSD-SKSSRGDRVALISGTPEQKRAAENLI 617
SG+ I ++ G+R+ I GTPE A L+
Sbjct: 304 SGSRISIAKVPHDETGERMFTIQGTPEATERALMLL 339
>gi|224137186|ref|XP_002327061.1| predicted protein [Populus trichocarpa]
gi|222835376|gb|EEE73811.1| predicted protein [Populus trichocarpa]
Length = 357
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 149/337 (44%), Gaps = 82/337 (24%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIE----S 362
+++ R++ P KIG+VIGK G I+ IR+ + A I + D +E VI +++ E +
Sbjct: 50 DVIFRIVVPSGKIGKVIGKQGHRIQKIREDTKATIKIADAVARHEERVIIISSKENENGA 109
Query: 363 PDDIKSMAVEAVLLLQTK---------------INDEDDDTVTIRLLVSSKVIGCIIGKS 407
D ++ A L+L +N TIRLL++ G +IG S
Sbjct: 110 TDAENALQRIAELILNEDDGGSSAGGGVEIGKLVNAGHVAANTIRLLIAGSQAGSLIGMS 169
Query: 408 GSIINEIRKRTKADVRISKGDK-PKCADA--NDELVEVVGEVGSVRDALVQIILRLRDDA 464
G I ++R + A + + ++ P CA A +D +V++ G+V V AL +I +LR+
Sbjct: 170 GQNIVKLRNSSGAMITVLAPNQLPLCASAYESDRVVQISGDVPVVLKALEEIGCQLRE-- 227
Query: 465 LKDRDGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLY 524
NPP ++S S Y
Sbjct: 228 --------NPPK---------------------------------------QVISISPSY 240
Query: 525 GYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISG 584
Y ++ P+ + ++ Y +T+E++VP +G +IG++GSN++ IR SG
Sbjct: 241 NYSAV-----PFQQYAPQAAADY------VTMEMMVPETMMGGLIGRSGSNISRIRVESG 289
Query: 585 ATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFI 621
A I++ K ++ R ++G+ +Q A+ + +I
Sbjct: 290 AVIKVHGGKGAQKHRHIQLAGSSQQVALAKQRVDEYI 326
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 94/200 (47%), Gaps = 24/200 (12%)
Query: 37 VIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDV 96
VI+RI+ P G IG VIGK G I IR++T+A +K+ D ++RV+ I S K+ E+
Sbjct: 51 VIFRIVVPSGKIGKVIGKQGHRIQKIREDTKATIKIADAVARHEERVIIISS--KENENG 108
Query: 97 EVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDN----------DKKRKEKEECQILV 146
D A++AL ++ I N + + ++L+
Sbjct: 109 ATD-----------AENALQRIAELILNEDDGGSSAGGGVEIGKLVNAGHVAANTIRLLI 157
Query: 147 PSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKK 206
SQ+ ++IG +G I +LR+ + I V + P + A E D V ISG+ V K
Sbjct: 158 AGSQAGSLIGMSGQNIVKLRNSSGAMITVLAPN-QLPLCASAYESDRVVQISGDVPVVLK 216
Query: 207 ALFAISAIMYKFSPREDIPL 226
AL I + + P++ I +
Sbjct: 217 ALEEIGCQLRENPPKQVISI 236
>gi|405120191|gb|AFR94962.1| cytoplasmic protein [Cryptococcus neoformans var. grubii H99]
Length = 365
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 92/336 (27%), Positives = 154/336 (45%), Gaps = 49/336 (14%)
Query: 306 EELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDD 365
+L +R L + G +IGK G TI +IR ++G + V + V++VT +
Sbjct: 29 HQLSLRSLVSTKEAGIIIGKSGATIATIRDSTGVKAGVSKVVQGVQDRVLSVTG--DLEG 86
Query: 366 IKSMAVE-AVLLLQTKINDED------DDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRT 418
+ S E A LLL+T ++D +IRLL+S ++G +IG+SG I +I+ +
Sbjct: 87 VASAYAEVARLLLETPLSDSSLPPPPVGSFTSIRLLISHNLMGTVIGRSGLKIKQIQDMS 146
Query: 419 KADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSR---NPP 475
A + SK P+ + + +VEV G V +++ A+++I L +D DR +P
Sbjct: 147 GARMVASKEMLPQ---STERVVEVQGSVDAIKTAVLEIGKCLLEDW--DRGAGTVLYHPG 201
Query: 476 VGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSP 535
D +G G +A +GS G+ +S G+G S P
Sbjct: 202 AAGDAGVLAG------------------GLGAQAVTGSTGGIRRTSVAAGFGGYSGDRRP 243
Query: 536 Y--GSMS-----------SYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKI 582
GS+S S ++ P T + +P++ VG +IG+ GS + IR++
Sbjct: 244 SRGGSISGPSGVSGERRPSEGPQVNLNDPNLRTQNISIPSDMVGCIIGRGGSKITEIRRL 303
Query: 583 SGATIEMSD-SKSSRGDRVALISGTPEQKRAAENLI 617
SG+ I ++ G+R+ I GTPE A L+
Sbjct: 304 SGSRISIAKVPHDETGERMFTIQGTPEATERALMLL 339
>gi|317418810|emb|CBN80848.1| PolyrC-binding protein 2 [Dicentrarchus labrax]
Length = 306
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 87/338 (25%), Positives = 159/338 (47%), Gaps = 50/338 (14%)
Query: 297 SGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVIT 356
SG++ + L IR+L ++G +IGK G ++K +R+ SGA+I++ + N E +IT
Sbjct: 3 SGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIIT 60
Query: 357 V----TAIESPDDIKSMAVEAVLLLQTKINDEDDDT-------VTIRLLVSSKVIGCIIG 405
+ TAI SM +E L+ I+ ++ VT+R++V + G +IG
Sbjct: 61 LAGPTTAI---FKAFSMIIEK---LEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIG 114
Query: 406 KSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDAL 465
K G I EIR+ T A V+++ P ++ + + + G S+ + + QI + + +
Sbjct: 115 KGGCKIKEIRESTGAQVQVAGDMLP---NSTERAITIAGTPQSIIECVKQICVVMLESPP 171
Query: 466 KDRDGSRNP-PVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLY 524
K P P G+ I++ G +A + G + L
Sbjct: 172 KGVTIPYRPKPSGSPVIFAGG----------------------QAYAVQGQHAIPQPDLT 209
Query: 525 GYGSLSMGDSPYGSMSSYSSKLYGGLPPPL---TLEVLVPANAVGKVIGKAGSNLANIRK 581
L+M SP+ + S++ + G+ + E+ +P + +G +IG+ G+ + IR+
Sbjct: 210 KLHQLAMQQSPFPI--APSNQGFTGIDASAQTSSHEMTIPNDLIGCIIGRQGAKINEIRQ 267
Query: 582 ISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQA 619
+SGA I++++ DR I+G+P AE LI A
Sbjct: 268 MSGAQIKIANPVDGSTDRQVTITGSPASISLAEYLINA 305
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 82/347 (23%), Positives = 146/347 (42%), Gaps = 67/347 (19%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH 89
E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R++T
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIIT---- 60
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAV-----ANATDNDKKRKEKEECQI 144
L A+ K + I + ++ T++ K +I
Sbjct: 61 ------------------LAGPTTAIFKAFSMIIEKLEEDISSSMTNSTATSKPPVTLRI 102
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAV 204
+VP+SQ ++IGK G IK +R T ++V T + + I+G +++
Sbjct: 103 VVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNST-------ERAITIAGTPQSI 155
Query: 205 KKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSV 264
+ + I +M + P+ T+ P PS P+ GG A + ++
Sbjct: 156 IECVKQICVVMLESPPK-----GVTIPYRPK----PSGSPVIFAGG---QAYAVQGQHAI 203
Query: 265 PSILGAARVPD---LQGYADTGNTWPVYSTGLSLVSGLVGASQ--SEELVIRVLCPFNKI 319
P PD L A + +P+ + +G+ ++Q S E+ I P + I
Sbjct: 204 PQ-------PDLTKLHQLAMQQSPFPIAPSNQGF-TGIDASAQTSSHEMTI----PNDLI 251
Query: 320 GRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
G +IG+ G I IRQ SGAQI + + D + +T+T SP I
Sbjct: 252 GCIIGRQGAKINEIRQMSGAQIKIANPVDGSTDRQVTITG--SPASI 296
>gi|33150676|gb|AAP97216.1|AF092441_1 CBP [Homo sapiens]
Length = 397
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 154/329 (46%), Gaps = 52/329 (15%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
L +R+L ++G +IGK G T+K IR+ S A+I + + + E + T+T
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE--GSFLERITTITGS------T 69
Query: 368 SMAVEAVLLLQTKINDED------------DDTVTIRLLVSSKVIGCIIGKSGSIINEIR 415
+ AV ++ K+ DED VT+RL++ + G +IG++G+ I EIR
Sbjct: 70 AAVFHAVSMIAFKL-DEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGQAGTKIKEIR 128
Query: 416 KRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPP 475
+ T A V+++ P ++ + V V G V DA++ + ++ L+ +PP
Sbjct: 129 ETTGAQVQVAGDLFP---NSTERAVTVSG----VPDAIILCVRQICAVILE------SPP 175
Query: 476 VGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSP 535
GA Y +S+ +L L +Q G ++ + LS P
Sbjct: 176 KGATIPYHPS--LSLGTVL--------LSANQGFSVQGQYGAVTQREVTKLQQLSSHAVP 225
Query: 536 YGSMSSYSSKLYGGLPPPL---TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDS 592
+ + S + GL P + E LVP + +G VIG+ GS ++ IR++SGA I++ +
Sbjct: 226 FATPS-----VVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQ 280
Query: 593 KSSRGDRVALISGTPEQKRAAENLIQAFI 621
G+R I+G+P A+ LI A +
Sbjct: 281 AEGAGERHVTITGSPVSIALAQYLITACL 309
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 138/342 (40%), Gaps = 85/342 (24%)
Query: 36 SVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKED 95
++ R+L +GS+IGK G+ + IR+++ AR+ + + +R+ TI
Sbjct: 17 TLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SFLERITTITGSTAAVFH 74
Query: 96 VEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANII 155
F E LCAA + + ++++P+SQ ++I
Sbjct: 75 AVSMIAFKLDEDLCAA-----------------PANGGNVSRPPVTLRLVIPASQCGSLI 117
Query: 156 GKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIM 215
G+AG IK +R T ++V T + V +SG +A+ + I A++
Sbjct: 118 GQAGTKIKEIRETTGAQVQVAGDLFPNST-------ERAVTVSGVPDAIILCVRQICAVI 170
Query: 216 YKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPD 275
E+PP + +P + PS S+ ++L +A
Sbjct: 171 L---------------ESPPK---GATIPYH-------------PSLSLGTVLLSAN--- 196
Query: 276 LQGYADTGNTWPV-----------------YSTGLSLVSGLVGASQ--SEELVIRVLCPF 316
QG++ G V ++T S+V GL +Q S+E ++ P
Sbjct: 197 -QGFSVQGQYGAVTQREVTKLQQLSSHAVPFATP-SVVPGLDPGTQTSSQEFLV----PN 250
Query: 317 NKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
+ IG VIG+ G I IRQ SGA I + + + E +T+T
Sbjct: 251 DLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTIT 292
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 6/80 (7%)
Query: 384 EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVV 443
E T+T+R+L+ K +G IIGK G + IR+++ A + IS+G + + +
Sbjct: 13 ELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG------SFLERITTIT 66
Query: 444 GEVGSVRDALVQIILRLRDD 463
G +V A+ I +L +D
Sbjct: 67 GSTAAVFHAVSMIAFKLDED 86
>gi|318054596|ref|NP_001188110.1| poly(rC)-binding protein 2 [Ictalurus punctatus]
gi|308322769|gb|ADO28522.1| poly(rc)-binding protein 2 [Ictalurus punctatus]
Length = 318
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 149/324 (45%), Gaps = 43/324 (13%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
L IR+L ++G +IGK G ++K +R+ SGA+I++ + N E +IT+ P
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLAG---PTTAI 68
Query: 368 SMAVEAVL-LLQTKINDEDDDT-------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
A ++ L+ I+ ++ VT+R++V + G +IGK G I EIR+ T
Sbjct: 69 FKAFSMIIDKLEEDISSSMSNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTG 128
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNP-PVGA 478
A V+++ P ++ + + + G S+ + + QI + + + K P P G+
Sbjct: 129 AQVQVAGDMLP---NSTERAITIAGTPLSIIECVKQICVVMLESPPKGVTIPYRPKPSGS 185
Query: 479 DHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGS 538
I++ G +A + G + L L+M SP+
Sbjct: 186 PVIFAGG----------------------QAYAVQGQHAIPQPDLTKLHQLAMQQSPF-P 222
Query: 539 MSSYSSKLYGGLPPPL---TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSS 595
++ S G+ + E+ +P + +G +IG+ G+ + IR++SGA I++++
Sbjct: 223 LAPSSQGFTAGMDATTQTGSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEG 282
Query: 596 RGDRVALISGTPEQKRAAENLIQA 619
DR I+G+P AE LI A
Sbjct: 283 SNDRQVTITGSPASISLAEYLINA 306
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 148/346 (42%), Gaps = 64/346 (18%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH 89
E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R++T+
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLAG- 63
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALL----KVHAAIANAVANATDNDKKRKEKEECQIL 145
P A A K+ I+++++N+T K +I+
Sbjct: 64 -----------------PTTAIFKAFSMIIDKLEEDISSSMSNSTATSKP---PVTLRIV 103
Query: 146 VPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVK 205
VP+SQ ++IGK G IK +R T ++V T + + I+G ++
Sbjct: 104 VPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNST-------ERAITIAGTPLSII 156
Query: 206 KALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVP 265
+ + I +M + P+ T+ P PS P+ GG A + ++P
Sbjct: 157 ECVKQICVVMLESPPK-----GVTIPYRPK----PSGSPVIFAGG---QAYAVQGQHAIP 204
Query: 266 SILGAARVPD---LQGYADTGNTWPVYSTGLSLVSGLVGASQ--SEELVIRVLCPFNKIG 320
PD L A + +P+ + +G+ +Q S EL I P + IG
Sbjct: 205 Q-------PDLTKLHQLAMQQSPFPLAPSSQGFTAGMDATTQTGSHELTI----PNDLIG 253
Query: 321 RVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
+IG+ G I IRQ SGAQI + + + ++ +T+T SP I
Sbjct: 254 CIIGRQGAKINEIRQMSGAQIKIANPVEGSNDRQVTITG--SPASI 297
>gi|449274935|gb|EMC83962.1| Poly(rC)-binding protein 4 [Columba livia]
Length = 324
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 148/337 (43%), Gaps = 59/337 (17%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
L +R+L +IG +IGK G T+K IR+ S A+I + + C +T I D
Sbjct: 23 LTLRMLMHGKEIGSIIGKKGETVKRIREQSSARITISE-----GSCPERITTITGSTDAV 77
Query: 368 SMAVEAVLL-LQTKINDEDDDT------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTKA 420
AV + L+ + D VT+RL++ + G +IGK+G+ I EIR+ T A
Sbjct: 78 FRAVSMIAFKLEEDLGAGSDGAAVGRSPVTLRLVIPASQCGSLIGKAGAKIREIRESTGA 137
Query: 421 DVRISKGDKPKCADANDELVEVVGEVGSVRDALVQI---ILRLRDD-------ALKDRDG 470
V+++ P ++ + V V G ++ + QI IL + + A + G
Sbjct: 138 QVQVAGDLLP---NSTERAVTVSGVPDTIIHCVRQICAVILEVPTESPTQAWGAFPHQHG 194
Query: 471 SRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLS 530
P + I S PP P VG + D+ Y Y +
Sbjct: 195 YLPPKMTLSLISWSPCTHQSPPN----PAVGKHWHPIMTDA------------YSYWRPT 238
Query: 531 MGDSPYGSMSSYSSKLYGGLPPPL-------TLEVLVPANAVGKVIGKAGSNLANIRKIS 583
+P ++S S LPP L + E LVP + +G +IG+ GS ++ IR++S
Sbjct: 239 ---TPL--LTSLS------LPPGLDTSSQNSSQEFLVPNDLIGCIIGRHGSKISEIRQMS 287
Query: 584 GATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAF 620
GA I++ + +R I+G+P A+ LI A+
Sbjct: 288 GAHIKIGNQTEGSSERHVTITGSPVSITVAQYLITAW 324
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 142/345 (41%), Gaps = 80/345 (23%)
Query: 36 SVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKED 95
++ R+L IGS+IGK G+ + IR+++ AR+ + + +R+ TI
Sbjct: 22 TLTLRMLMHGKEIGSIIGKKGETVKRIREQSSARITISEG--SCPERITTI--------- 70
Query: 96 VEVDDEFNDKEPLCAAQDALLKVHAAIA----NAVANATDNDKKRKEKEECQILVPSSQS 151
+ DA+ + + IA + +D + ++++P+SQ
Sbjct: 71 -------------TGSTDAVFRAVSMIAFKLEEDLGAGSDGAAVGRSPVTLRLVIPASQC 117
Query: 152 ANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAI 211
++IGKAGA I+ +R T ++V T + V +SG + + + I
Sbjct: 118 GSLIGKAGAKIREIRESTGAQVQVAGDLLPNST-------ERAVTVSGVPDTIIHCVRQI 170
Query: 212 SAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSIL--- 268
A++ ++P E+ + G +P+ LP + S++
Sbjct: 171 CAVIL------EVPTESPTQAW----------------GAFPHQHGYLPPKMTLSLISWS 208
Query: 269 ------------GAARVPDLQ-GYADTGNTWPVYSTGLSLVSGLVGASQ--SEELVIRVL 313
G P + Y+ T P+ T LSL GL +SQ S+E ++
Sbjct: 209 PCTHQSPPNPAVGKHWHPIMTDAYSYWRPTTPLL-TSLSLPPGLDTSSQNSSQEFLV--- 264
Query: 314 CPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
P + IG +IG+ G I IRQ SGA I + + + E +T+T
Sbjct: 265 -PNDLIGCIIGRHGSKISEIRQMSGAHIKIGNQTEGSSERHVTIT 308
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Query: 382 NDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVE 441
+ E T+T+R+L+ K IG IIGK G + IR+++ A + IS+G P + +
Sbjct: 16 DTELSITLTLRMLMHGKEIGSIIGKKGETVKRIREQSSARITISEGSCP------ERITT 69
Query: 442 VVGEVGSVRDALVQIILRLRDDALKDRDGS 471
+ G +V A+ I +L +D DG+
Sbjct: 70 ITGSTDAVFRAVSMIAFKLEEDLGAGSDGA 99
>gi|348528761|ref|XP_003451884.1| PREDICTED: poly(rC)-binding protein 2-like [Oreochromis niloticus]
Length = 317
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 87/338 (25%), Positives = 159/338 (47%), Gaps = 50/338 (14%)
Query: 297 SGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVIT 356
SG++ + L IR+L ++G +IGK G ++K +R+ SGA+I++ + N E +IT
Sbjct: 3 SGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIIT 60
Query: 357 V----TAIESPDDIKSMAVEAVLLLQTKINDEDDDT-------VTIRLLVSSKVIGCIIG 405
+ TAI SM +E L+ I+ ++ VT+R++V + G +IG
Sbjct: 61 LAGPTTAI---FKAFSMIIEK---LEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIG 114
Query: 406 KSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDAL 465
K G I EIR+ T A V+++ P ++ + + + G S+ + + QI + + +
Sbjct: 115 KGGCKIKEIRESTGAQVQVAGDMLP---NSTERAITIAGTPQSIIECVKQICVVMLESPP 171
Query: 466 KDRDGSRNP-PVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLY 524
K P P G+ I++ G +A + G + L
Sbjct: 172 KGVTIPYRPKPSGSPVIFAGG----------------------QAYAVQGQHAIPQPDLT 209
Query: 525 GYGSLSMGDSPYGSMSSYSSKLYGGLPPPL---TLEVLVPANAVGKVIGKAGSNLANIRK 581
L+M SP+ + S++ + G+ + E+ +P + +G +IG+ G+ + IR+
Sbjct: 210 KLHQLAMQQSPFPI--APSNQGFTGMDASAQTSSHEMTIPNDLIGCIIGRQGAKINEIRQ 267
Query: 582 ISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQA 619
+SGA I++++ DR I+G+P AE LI A
Sbjct: 268 MSGAQIKIANPVDGSTDRQVTITGSPASISLAEYLINA 305
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 82/347 (23%), Positives = 146/347 (42%), Gaps = 67/347 (19%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH 89
E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R++T
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIIT---- 60
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAV-----ANATDNDKKRKEKEECQI 144
L A+ K + I + ++ T++ K +I
Sbjct: 61 ------------------LAGPTTAIFKAFSMIIEKLEEDISSSMTNSTATSKPPVTLRI 102
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAV 204
+VP+SQ ++IGK G IK +R T ++V T + + I+G +++
Sbjct: 103 VVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNST-------ERAITIAGTPQSI 155
Query: 205 KKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSV 264
+ + I +M + P+ T+ P PS P+ GG A + ++
Sbjct: 156 IECVKQICVVMLESPPKG-----VTIPYRPK----PSGSPVIFAGG---QAYAVQGQHAI 203
Query: 265 PSILGAARVPDL---QGYADTGNTWPVYSTGLSLVSGLVGASQ--SEELVIRVLCPFNKI 319
P PDL A + +P+ + +G+ ++Q S E+ I P + I
Sbjct: 204 PQ-------PDLTKLHQLAMQQSPFPIAPSNQGF-TGMDASAQTSSHEMTI----PNDLI 251
Query: 320 GRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
G +IG+ G I IRQ SGAQI + + D + +T+T SP I
Sbjct: 252 GCIIGRQGAKINEIRQMSGAQIKIANPVDGSTDRQVTITG--SPASI 296
>gi|121710178|ref|XP_001272705.1| KH domain RNA binding protein [Aspergillus clavatus NRRL 1]
gi|119400855|gb|EAW11279.1| KH domain RNA binding protein [Aspergillus clavatus NRRL 1]
Length = 464
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 106/409 (25%), Positives = 176/409 (43%), Gaps = 83/409 (20%)
Query: 273 VPDL-QGYADTGNTWPVYSTGLSLVSGLVGASQSEE---------LVIRVLCPFNKIGRV 322
VPD G +G T P+ ST G +SQ E+ + IR + + V
Sbjct: 70 VPDAPNGKGASGETQPIQSTA---SHGDRASSQPEQHRPQDESSWIHIRAVISSQEAATV 126
Query: 323 IGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKIN 382
IGKGG + IR+ SGA+ V D E ++TV+ P D + A L+++T +N
Sbjct: 127 IGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSG---PQDAVAKAFG--LIIRT-LN 180
Query: 383 DEDDD--------TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCAD 434
+E D T +RLL+ +IG IIGK GS I EI++ + A + S P
Sbjct: 181 NEPLDAPSTAQSKTYPLRLLIPHILIGSIIGKGGSRIREIQEASGARLNASDACLPL--- 237
Query: 435 ANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSS-------GTG 487
+ + + ++G SV A + + L + L +R G P + + S G
Sbjct: 238 STERSLVILGVADSVHIATYYVAVTLVEQ-LTERFGG---PAASAYATRSGGPAGAVPGG 293
Query: 488 ISMPPLLPSIPPVGPLGYDQ----------RADSGS-GIGMLS--------SSSLYGYGS 528
+ + P +P P G G+ + RA +G+ G+ L + YG+
Sbjct: 294 MQVVPYVPQ-PAGGQYGHPETFKRHHPHPNRAAAGAYGVPYLHGQPAPAPVAQPALHYGA 352
Query: 529 LSMGDSPYGSMSSYSSKLYGGLPP--------------------PLTLEVLVPANAVGKV 568
+PY + YG P PLT ++ +P + VG +
Sbjct: 353 TP--HTPYAGAGPHQPAPYGAPQPAQSRGAPTPATPAGGVMPGQPLTQQIYIPNDMVGAI 410
Query: 569 IGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLI 617
IGK G+ + IR +SG+ I++++ + + +R+ I+GT E + A ++
Sbjct: 411 IGKGGAKINEIRHLSGSVIKINEPQENSNERLVTITGTQECNQMALYML 459
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 81/380 (21%), Positives = 151/380 (39%), Gaps = 76/380 (20%)
Query: 27 EKDEKGNEESVIY-RILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVT 85
E+ +E S I+ R + +VIGK G+ ++ IR+ + A+ V D GA +R++T
Sbjct: 101 EQHRPQDESSWIHIRAVISSQEAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILT 160
Query: 86 IYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEE--CQ 143
+ QDA+ K I + N + + + +
Sbjct: 161 V----------------------SGPQDAVAKAFGLIIRTLNNEPLDAPSTAQSKTYPLR 198
Query: 144 ILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEA 203
+L+P +IIGK G+ I+ ++ + + + DA P + + ++I G +++
Sbjct: 199 LLIPHILIGSIIGKGGSRIREIQEASGARLNAS--DACLP-----LSTERSLVILGVADS 251
Query: 204 VKKALFAIS-AIMYKFSPREDIPLETTVREAPPSI---------IIPSDVPIYPPGGLYP 253
V A + ++ ++ + + R P + ++P VP P GG Y
Sbjct: 252 VHIATYYVAVTLVEQLTERFGGPAASAYATRSGGPAGAVPGGMQVVPY-VP-QPAGGQYG 309
Query: 254 NADPILPSRSVP--SILGAARVPDLQG-------------YADTGNT------------- 285
+ + P + GA VP L G Y T +T
Sbjct: 310 HPETFKRHHPHPNRAAAGAYGVPYLHGQPAPAPVAQPALHYGATPHTPYAGAGPHQPAPY 369
Query: 286 ---WPVYSTGLSLVSGLVGASQ-SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQI 341
P S G + G + L ++ P + +G +IGKGG I IR SG+ I
Sbjct: 370 GAPQPAQSRGAPTPATPAGGVMPGQPLTQQIYIPNDMVGAIIGKGGAKINEIRHLSGSVI 429
Query: 342 DVDDTKDNRDECVITVTAIE 361
+++ ++N +E ++T+T +
Sbjct: 430 KINEPQENSNERLVTITGTQ 449
>gi|348537598|ref|XP_003456280.1| PREDICTED: poly(rC)-binding protein 4-like [Oreochromis niloticus]
Length = 593
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 157/342 (45%), Gaps = 57/342 (16%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
L +R+L ++G +IGK G T+K IR+ S A+I++ + + E +IT+T P D
Sbjct: 128 LTLRLLMHGKEVGSIIGKKGETVKRIREESSARINISE--GSCPERIITITG---PTDC- 181
Query: 368 SMAVEAVLLLQTKINDE-----------DDDTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
A ++ K+ ++ VT+RL++ + G +IGK GS I EIR+
Sbjct: 182 --VFRAFTMITFKLEEDLMALVANGTVTSKPPVTLRLVIPASQCGSLIGKGGSKIKEIRE 239
Query: 417 RTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPV 476
T A V+++ P ++ + V + G +DA++Q + + L+ +PP
Sbjct: 240 TTGAQVQVAGDLLP---NSTEREVTISGS----QDAIIQCVKLICTVILE------SPPK 286
Query: 477 GA-----------------DHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLS 519
GA + ++ + S P L S+ G + Q S G +
Sbjct: 287 GATIPYRPSPTPGTVLLAGNQVFEASDFGSHP--LFSVAQ-GGVDLQQTYAVQSHYG-IP 342
Query: 520 SSSLYGYGSLSMGDSPYGSMSSYSSK-LYGGLPP---PLTLEVLVPANAVGKVIGKAGSN 575
S L LSM +S +++ L GG+ + E+L+P + +G +IG+ G+
Sbjct: 343 HSELAKLHQLSMQQQGLAPISQSATQVLPGGVEANSQTTSQELLIPNDLIGSIIGRQGTK 402
Query: 576 LANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLI 617
+ IR++SGA I++ S DR ISGTP A+ LI
Sbjct: 403 INEIRQVSGAQIKIGSQIDSTSDRHVTISGTPIAINLAQYLI 444
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 146/341 (42%), Gaps = 54/341 (15%)
Query: 36 SVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKED 95
++ R+L +GS+IGK G+ + IR+E+ AR+ + + +R++TI
Sbjct: 127 TLTLRLLMHGKEVGSIIGKKGETVKRIREESSARINISEG--SCPERIITITG------- 177
Query: 96 VEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANII 155
D F A K+ + VAN T K ++++P+SQ ++I
Sbjct: 178 -PTDCVFR------AFTMITFKLEEDLMALVANGTVTSKP---PVTLRLVIPASQCGSLI 227
Query: 156 GKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIM 215
GK G+ IK +R T ++V T + V ISG +A+ + + I ++
Sbjct: 228 GKGGSKIKEIRETTGAQVQVAGDLLPNST-------EREVTISGSQDAIIQCVKLICTVI 280
Query: 216 YKFSPR------EDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILG 269
+ P+ P TV A + SD +P + + + +V S G
Sbjct: 281 LESPPKGATIPYRPSPTPGTVLLAGNQVFEASDFGSHPLFSVAQGGVDLQQTYAVQSHYG 340
Query: 270 -----AARVPDL----QGYADTGNTWPVYSTGLSLVSGLVGA---SQSEELVIRVLCPFN 317
A++ L QG A P+ + ++ G V A + S+EL+I P +
Sbjct: 341 IPHSELAKLHQLSMQQQGLA------PISQSATQVLPGGVEANSQTTSQELLI----PND 390
Query: 318 KIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
IG +IG+ G I IRQ SGAQI + D+ + +T++
Sbjct: 391 LIGSIIGRQGTKINEIRQVSGAQIKIGSQIDSTSDRHVTIS 431
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+T+RLL+ K +G IIGK G + IR+ + A + IS+G P + ++ + G
Sbjct: 127 TLTLRLLMHGKEVGSIIGKKGETVKRIREESSARINISEGSCP------ERIITITGPTD 180
Query: 448 SVRDALVQIILRLRDDAL 465
V A I +L +D +
Sbjct: 181 CVFRAFTMITFKLEEDLM 198
Score = 42.7 bits (99), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 33/56 (58%)
Query: 31 KGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTI 86
+ N ++ +L P+ +IGS+IG+ G IN IRQ + A++K+ DR VTI
Sbjct: 375 EANSQTTSQELLIPNDLIGSIIGRQGTKINEIRQVSGAQIKIGSQIDSTSDRHVTI 430
>gi|410970835|ref|XP_003991882.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 1 [Felis catus]
Length = 536
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 150/329 (45%), Gaps = 33/329 (10%)
Query: 301 GASQSEE--LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
G+SQ+ + +R+L P +G +IGK G TIK+I + + +++D+ K+N VT
Sbjct: 122 GSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHR-KENSGAAEKPVT 180
Query: 359 AIESPDDIKSMAVEAVLLLQTKINDEDD--DTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
+P+ S A +L + K DE + + +++L + ++G +IGK G + +I
Sbjct: 181 IHATPEGT-SEACRMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEH 239
Query: 417 RTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRD----DALKDRDGSR 472
T + IS + + + V G V + +A V+I+ +LR+ D L +
Sbjct: 240 ETGTKITISSLQDLSIYNP-ERTITVKGTVEACANAEVEIMKKLREAFENDMLAVNQQAN 298
Query: 473 NPP---VGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSL 529
P + A I+S+G + +PP Y A L +G
Sbjct: 299 LIPGLNLSALGIFSTGLSV-LPPPTGPRGAPPAPPYHPFATHSGYFSSLYPPHQFG---- 353
Query: 530 SMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEM 589
P+ SY P + + +P AVG +IGK G+++ + + +GA+I++
Sbjct: 354 -----PFPHHHSY--------PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI 400
Query: 590 SDSKS-SRGDRVALISGTPEQKRAAENLI 617
+ ++ +R+ +I+G PE + A+ I
Sbjct: 401 APAEGPDVSERMVIITGPPEAQFKAQGRI 429
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 89/396 (22%), Positives = 156/396 (39%), Gaps = 97/396 (24%)
Query: 142 CQILVPSSQSANIIGKAGATIKRLRSKTRT-----------------SIKVTPKDASEPT 184
+ILVP+ IIGK G TIK + +T++ +I TP+ SE
Sbjct: 133 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTSE-- 190
Query: 185 HSCAMEFDNFVLISGESEAVKKA------LFAISAIMYKFSPREDIPLETTVREAPPSII 238
+C M + ++ E++ K A + A + ++ + +E L+ E I
Sbjct: 191 -ACRMILE---IMQKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKIT 246
Query: 239 IPS--DVPIYPP-------GGLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTWP-- 287
I S D+ IY P G + A+ + + L A D+ N P
Sbjct: 247 ISSLQDLSIYNPERTITVKGTVEACANAEV---EIMKKLREAFENDMLAVNQQANLIPGL 303
Query: 288 ------VYSTGLSLV---------------------SGLVGA--------------SQSE 306
++STGLS++ SG + S E
Sbjct: 304 NLSALGIFSTGLSVLPPPTGPRGAPPAPPYHPFATHSGYFSSLYPPHQFGPFPHHHSYPE 363
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTK--DNRDECVITVTAIESPD 364
+ ++ + P +G +IGK G IK + + +GA I + + D + VI I P
Sbjct: 364 QEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVI----ITGPP 419
Query: 365 DIKSMA---VEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKAD 421
+ + A + L + N +++ + + V S G +IGK G +NE++ T A+
Sbjct: 420 EAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAE 479
Query: 422 VRISKGDKPKCADANDE-LVEVVGEVGSVRDALVQI 456
V + + P D N+E +V ++G + + A +I
Sbjct: 480 VIVPRDQTP---DENEEVIVRIIGHFFASQTAQRKI 512
Score = 45.4 bits (106), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 83/388 (21%), Positives = 152/388 (39%), Gaps = 93/388 (23%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKEDVEV 98
RIL P +G++IGK G I +I ++T++RV + GA ++ VTI++
Sbjct: 134 RILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHA---------- 183
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
E A +L++ A ++ K E+ +IL + +IGK
Sbjct: 184 -----TPEGTSEACRMILEIMQKEA--------DETKLAEEIPLKILAHNGLVGRLIGKE 230
Query: 159 GATIKRLRSKTRTSIKVTP-KDAS--EPTHSCAMEFDNFVLISGESEAVKKALFAISAIM 215
G +K++ +T T I ++ +D S P + ++ + E E +KK A M
Sbjct: 231 GRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGTVEACANAEVEIMKKLREAFENDM 290
Query: 216 YKFSPRED-IP---------LETTVREAPP------------------------SIIIPS 241
+ + + IP T + PP S+ P
Sbjct: 291 LAVNQQANLIPGLNLSALGIFSTGLSVLPPPTGPRGAPPAPPYHPFATHSGYFSSLYPPH 350
Query: 242 DVPIYPPGGLYPNADPI---LPSRSVPSILG--AARVPDLQGYADTG-----NTWPVYST 291
+P YP + + +P+++V +I+G A + L +A P S
Sbjct: 351 QFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSE 410
Query: 292 GLSLVSG-----------LVGASQSE---------ELVIRVLCPFNKIGRVIGKGGGTIK 331
+ +++G + G + E +L + P + GRVIGKGG T+
Sbjct: 411 RMVIITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVN 470
Query: 332 SIRQASGAQIDV--DDTKDNRDECVITV 357
++ + A++ V D T D +E ++ +
Sbjct: 471 ELQNLTSAEVIVPRDQTPDENEEVIVRI 498
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 58/148 (39%), Gaps = 24/148 (16%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPF-PGAKDRVVTIYSHVKDK 93
E I + P +G++IGK G I + + A +K+ P +R+V I
Sbjct: 363 EQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII------- 415
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
+A K I + + K + K E I VPSS +
Sbjct: 416 ---------------TGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGR 460
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+IGK G T+ L++ T + + P+D +
Sbjct: 461 VIGKGGKTVNELQNLTSAEV-IVPRDQT 487
>gi|147855522|emb|CAN83854.1| hypothetical protein VITISV_031103 [Vitis vinifera]
Length = 321
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 100/203 (49%), Gaps = 34/203 (16%)
Query: 17 DGKNQKRRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPF 76
D ++ KRR +D V++RI+ P IG VIGK G I IR+ET+A +K+ D
Sbjct: 47 DHRSPKRRAKNQD-------VLFRIVVPSRQIGKVIGKEGSRIQKIREETKATIKIADAI 99
Query: 77 PGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLK--------VHAAIANAVAN 128
++RV+ I S KD E+V D E L +LK + + + VAN
Sbjct: 100 ARHEERVIIISS--KDSENVISDAE----NALLQXASLILKEDDSNTDALKVGVGHVVAN 153
Query: 129 ATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCA 188
A ++L+ SQ+ +IG +G I++LR+ + +I + P++ P + A
Sbjct: 154 AI------------RLLIAGSQAGCLIGMSGQNIEKLRNSSGATITILPQN-QLPLCASA 200
Query: 189 MEFDNFVLISGESEAVKKALFAI 211
+ D V ISG+ AV KAL I
Sbjct: 201 HDSDRMVQISGDVPAVLKALEEI 223
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 98/179 (54%), Gaps = 17/179 (9%)
Query: 303 SQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIES 362
+++++++ R++ P +IG+VIGK G I+ IR+ + A I + D +E VI +++ +S
Sbjct: 55 AKNQDVLFRIVVPSRQIGKVIGKEGSRIQKIREETKATIKIADAIARHEERVIIISSKDS 114
Query: 363 PDDIKSMAVEAVLLLQTKINDEDDDTV-------------TIRLLVSSKVIGCIIGKSGS 409
+++ S A A+L + I EDD IRLL++ GC+IG SG
Sbjct: 115 -ENVISDAENALLQXASLILKEDDSNTDALKVGVGHVVANAIRLLIAGSQAGCLIGMSGQ 173
Query: 410 IINEIRKRTKADVRISKGDK-PKCADAN--DELVEVVGEVGSVRDALVQIILRLRDDAL 465
I ++R + A + I ++ P CA A+ D +V++ G+V +V AL +I +LR L
Sbjct: 174 NIEKLRNSSGATITILPQNQLPLCASAHDSDRMVQISGDVPAVLKALEEIGCQLRTTNL 232
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 111/259 (42%), Gaps = 64/259 (24%)
Query: 389 VTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADA---NDELVEVVGE 445
V R++V S+ IG +IGK GS I +IR+ TKA ++I ADA ++E V ++
Sbjct: 60 VLFRIVVPSRQIGKVIGKEGSRIQKIREETKATIKI--------ADAIARHEERVIIISS 111
Query: 446 ------VGSVRDALVQ---IILRLRD---DALKDRDGSRNPPVGADHIYSSGTGISMPPL 493
+ +AL+Q +IL+ D DALK VG H+ ++ L
Sbjct: 112 KDSENVISDAENALLQXASLILKEDDSNTDALK---------VGVGHVVANAI-----RL 157
Query: 494 LPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLY---GGL 550
L + G L SG I L +SS L P + + S ++ G +
Sbjct: 158 LIAGSQAGCL----IGMSGQNIEKLRNSSGATITILPQNQLPLCASAHDSDRMVQISGDV 213
Query: 551 PPPL--------------------TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMS 590
P L TL +++P VG +IG+ GSN++ IR SGA I++
Sbjct: 214 PAVLKALEEIGCQLRTTNLAADYVTLNMMIPETLVGGLIGRCGSNISRIRNESGAMIKVY 273
Query: 591 DSKSSRGDRVALISGTPEQ 609
K + R G+ +Q
Sbjct: 274 GGKGEQNHRQIQFGGSAQQ 292
Score = 40.0 bits (92), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 65/125 (52%), Gaps = 11/125 (8%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK-S 368
IR+L ++ G +IG G I+ +R +SGA I + +++ + +A +S ++ S
Sbjct: 155 IRLLIAGSQAGCLIGMSGQNIEKLRNSSGATITILP----QNQLPLCASAHDSDRMVQIS 210
Query: 369 MAVEAVLL------LQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADV 422
V AVL Q + + D VT+ +++ ++G +IG+ GS I+ IR + A +
Sbjct: 211 GDVPAVLKALEEIGCQLRTTNLAADYVTLNMMIPETLVGGLIGRCGSNISRIRNESGAMI 270
Query: 423 RISKG 427
++ G
Sbjct: 271 KVYGG 275
>gi|308321889|gb|ADO28082.1| poly(rc)-binding protein 2 [Ictalurus furcatus]
Length = 318
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 148/323 (45%), Gaps = 41/323 (12%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
L IR+L ++G +IGK G ++K +R+ SGA+I++ + N E +IT+ P
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLAG---PTTAI 68
Query: 368 SMAVEAVL-LLQTKINDEDDDT-------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
A ++ L+ I+ ++ VT+R++V + G +IGK G I EIR+ T
Sbjct: 69 FKAFSMIIDKLEEDISSSMSNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTG 128
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGAD 479
A V+++ P ++ + + + G S+ + + QI + + + +PP G
Sbjct: 129 AQVQVAGDMLP---NSTERAITIAGTPLSIIECVKQICVVMLE----------SPPKGVT 175
Query: 480 HIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSM 539
Y PS PV G A G + L L+M SP+ +
Sbjct: 176 IPYRPK---------PSGSPVTFAGGQAYAVQGQH--AIPQPDLTKLHQLAMQQSPF-PL 223
Query: 540 SSYSSKLYGGLPPPL---TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSR 596
+ S G+ + E+ +P + +G +IG+ G+ + IR++SGA I++++
Sbjct: 224 APSSQGFTAGMDATTQTGSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGS 283
Query: 597 GDRVALISGTPEQKRAAENLIQA 619
DR I+G+P AE LI A
Sbjct: 284 NDRQVTITGSPASISLAEYLINA 306
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 148/346 (42%), Gaps = 64/346 (18%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH 89
E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R++T+
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLAG- 63
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALL----KVHAAIANAVANATDNDKKRKEKEECQIL 145
P A A K+ I+++++N+T K +I+
Sbjct: 64 -----------------PTTAIFKAFSMIIDKLEEDISSSMSNSTATSKP---PVTLRIV 103
Query: 146 VPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVK 205
VP+SQ ++IGK G IK +R T ++V T + + I+G ++
Sbjct: 104 VPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNST-------ERAITIAGTPLSII 156
Query: 206 KALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVP 265
+ + I +M + P+ T+ P PS P+ GG A + ++P
Sbjct: 157 ECVKQICVVMLESPPK-----GVTIPYRPK----PSGSPVTFAGG---QAYAVQGQHAIP 204
Query: 266 SILGAARVPD---LQGYADTGNTWPVYSTGLSLVSGLVGASQ--SEELVIRVLCPFNKIG 320
PD L A + +P+ + +G+ +Q S EL I P + IG
Sbjct: 205 Q-------PDLTKLHQLAMQQSPFPLAPSSQGFTAGMDATTQTGSHELTI----PNDLIG 253
Query: 321 RVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
+IG+ G I IRQ SGAQI + + + ++ +T+T SP I
Sbjct: 254 CIIGRQGAKINEIRQMSGAQIKIANPVEGSNDRQVTITG--SPASI 297
>gi|357137683|ref|XP_003570429.1| PREDICTED: RNA-binding protein Nova-1-like [Brachypodium
distachyon]
Length = 349
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 144/338 (42%), Gaps = 62/338 (18%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD---NRDECVITVTAIESPDDI 366
+R L G +IGKGG TI + SGA+I + + + ++ +I V+ + + I
Sbjct: 48 LRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRIIMVSGLFD-EVI 106
Query: 367 KSMA-VEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRIS 425
K+M V LL + + +E + RL+V + G IIGK G+ I + + A ++IS
Sbjct: 107 KAMELVLEKLLAEGEEFNEAEARPKFRLVVPNSSCGGIIGKGGATIKAFIEDSHAGIKIS 166
Query: 426 KGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSG 485
D +D LV + G + A+ I+ +L +D PP + +G
Sbjct: 167 PQDN-NFVGLHDRLVTITGPFNNQMRAIYLILSKLSEDV-------HYPPNLSSPFPYAG 218
Query: 486 TGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSK 545
G PS P P+GY + PY + +Y
Sbjct: 219 LG------FPSYPAPVPVGY------------------------MIPQVPYNNAVNYGPN 248
Query: 546 LYGG----------LPPPLTLE------VLVPANAVGKVIGKAGSNLANIRKISGATIEM 589
YGG + P T + + V +G V+G+AG N+ I + SGA I++
Sbjct: 249 GYGGRYQNNKPGTPVRSPATNDAQESHTIGVADEHIGAVVGRAGRNITEIIQASGARIKI 308
Query: 590 SDSK---SSRGDRVALISGTPEQKRAAENLIQAFIMAT 624
SD + DR I+GTPE +AAE++I + A+
Sbjct: 309 SDRGDFIAGTSDRKVTITGTPEAIQAAESMIMQRVSAS 346
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 87/375 (23%), Positives = 149/375 (39%), Gaps = 85/375 (22%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV---DPFPGAKDRVVTI 86
E E+ R L + G +IGK G IN + ++ AR+++ + FPG DR++ +
Sbjct: 39 EDDKEKPTHLRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRIIMV 98
Query: 87 YSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILV 146
D ++K + + + + + + + +++V
Sbjct: 99 ----------------------SGLFDEVIKAMELVLEKLLAEGEEFNEAEARPKFRLVV 136
Query: 147 PSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKK 206
P+S IIGK GATIK + IK++P+D ++ D V I+G
Sbjct: 137 PNSSCGGIIGKGGATIKAFIEDSHAGIKISPQD-----NNFVGLHDRLVTITG---PFNN 188
Query: 207 ALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPS 266
+ AI I+ K S ED+ PP++ P +P A PS P
Sbjct: 189 QMRAIYLILSKLS--EDV-------HYPPNLSSP-----------FPYAGLGFPSYPAPV 228
Query: 267 ILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFN--------- 317
+G +P + Y + N P +G G Q+ + V P
Sbjct: 229 PVGYM-IPQVP-YNNAVNYGP---------NGYGGRYQNNKPGTPVRSPATNDAQESHTI 277
Query: 318 -----KIGRVIGKGGGTIKSIRQASGAQIDVDDTKD---NRDECVITVTAIESPDDIKSM 369
IG V+G+ G I I QASGA+I + D D + +T+T +P+ I+
Sbjct: 278 GVADEHIGAVVGRAGRNITEIIQASGARIKISDRGDFIAGTSDRKVTITG--TPEAIQ-- 333
Query: 370 AVEAVLLLQTKINDE 384
A E++++ + + E
Sbjct: 334 AAESMIMQRVSASSE 348
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 383 DEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEV 442
D+ + +R LVS+ GCIIGK GS IN+ + ++ A +++S+ + ND ++ V
Sbjct: 40 DDKEKPTHLRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSHE-FFPGTNDRIIMV 98
Query: 443 VGEVGSVRDALVQIILRL 460
G V A+ ++ +L
Sbjct: 99 SGLFDEVIKAMELVLEKL 116
>gi|432857624|ref|XP_004068722.1| PREDICTED: poly(rC)-binding protein 2-like [Oryzias latipes]
Length = 317
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 87/338 (25%), Positives = 159/338 (47%), Gaps = 50/338 (14%)
Query: 297 SGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVIT 356
SG++ + L IR+L ++G +IGK G ++K +R+ SGA+I++ + N E +IT
Sbjct: 3 SGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIIT 60
Query: 357 V----TAIESPDDIKSMAVEAVLLLQTKINDEDDDT-------VTIRLLVSSKVIGCIIG 405
+ TAI SM +E L+ I+ ++ VT+R++V + G +IG
Sbjct: 61 LAGPTTAI---FKAFSMIIEK---LEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIG 114
Query: 406 KSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDAL 465
K G I EIR+ T A V+++ P ++ + + + G S+ + + QI + + +
Sbjct: 115 KGGCKIKEIRESTGAQVQVAGDMLP---NSTERAITIAGTPQSIIECVKQICVVMLESPP 171
Query: 466 KDRDGSRNP-PVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLY 524
K P P G+ I++ G +A + G + L
Sbjct: 172 KGVTIPYRPKPSGSPVIFAGG----------------------QAYAVQGQHAIPQPDLT 209
Query: 525 GYGSLSMGDSPYGSMSSYSSKLYGGLPPPL---TLEVLVPANAVGKVIGKAGSNLANIRK 581
L+M SP+ + S++ + G+ + E+ +P + +G +IG+ G+ + IR+
Sbjct: 210 KLHQLAMQQSPFPI--APSNQGFTGIDASAQTSSHEMTIPNDLIGCIIGRQGAKINEIRQ 267
Query: 582 ISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQA 619
+SGA I++++ DR I+G+P AE LI A
Sbjct: 268 MSGAQIKIANPVDGSTDRQVTITGSPASISLAEYLINA 305
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 82/347 (23%), Positives = 146/347 (42%), Gaps = 67/347 (19%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH 89
E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R++T
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIIT---- 60
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAV-----ANATDNDKKRKEKEECQI 144
L A+ K + I + ++ T++ K +I
Sbjct: 61 ------------------LAGPTTAIFKAFSMIIEKLEEDISSSMTNSTATSKPPVTLRI 102
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAV 204
+VP+SQ ++IGK G IK +R T ++V T + + I+G +++
Sbjct: 103 VVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNST-------ERAITIAGTPQSI 155
Query: 205 KKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSV 264
+ + I +M + P+ T+ P PS P+ GG A + ++
Sbjct: 156 IECVKQICVVMLESPPKG-----VTIPYRPK----PSGSPVIFAGG---QAYAVQGQHAI 203
Query: 265 PSILGAARVPDL---QGYADTGNTWPVYSTGLSLVSGLVGASQ--SEELVIRVLCPFNKI 319
P PDL A + +P+ + +G+ ++Q S E+ I P + I
Sbjct: 204 PQ-------PDLTKLHQLAMQQSPFPIAPSNQGF-TGIDASAQTSSHEMTI----PNDLI 251
Query: 320 GRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
G +IG+ G I IRQ SGAQI + + D + +T+T SP I
Sbjct: 252 GCIIGRQGAKINEIRQMSGAQIKIANPVDGSTDRQVTITG--SPASI 296
>gi|414867455|tpg|DAA46012.1| TPA: hypothetical protein ZEAMMB73_887859 [Zea mays]
Length = 455
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 101/210 (48%), Gaps = 48/210 (22%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDT-KDNRDECVITVTAIESPDDIKS 368
IR+LC IG VIGK G ++ + Q +GA+I V + KD E +I V++ E P + S
Sbjct: 214 IRILCASELIGSVIGKSGANVRRVEQQTGARIKVQEIDKDASGERLIIVSSNEIPTEPIS 273
Query: 369 MAVEAVLLLQTKI--------------NDE----DDDTVTIRLLVSSKVIGCIIGKSGSI 410
+EA++LL K+ DE ++ +IR+L +S++IG +IGKSG+
Sbjct: 274 PTIEALILLHDKVLMAEVKRNHGGGMRCDELPVSENGDKSIRILCASELIGSVIGKSGAN 333
Query: 411 INEIRKRTKADVRISKGDKPKCADANDELV-------------------------EVVGE 445
+ + ++T A +++ + DK DA+ E + +V G
Sbjct: 334 VRRVEQQTGARIKVQEIDK----DASGERLIIVSSNEIPTEPISPTIEALILLHDKVAGP 389
Query: 446 VGSVRDALVQIILRLRDDALKDRDGSRNPP 475
R AL +I RLR L+D + NPP
Sbjct: 390 PAIARGALTEIASRLRTRTLRDTSTANNPP 419
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 75/153 (49%), Gaps = 23/153 (15%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAK-DRVVTIYSHVKDKEDVEV 98
RILC +IGSVIGKSG + + Q+T AR+KV + A +R++ + S+ E+
Sbjct: 215 RILCASELIGSVIGKSGANVRRVEQQTGARIKVQEIDKDASGERLIIVSSN-------EI 267
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEK--------EECQILVPSSQ 150
EP+ +AL+ +H + A R ++ + +IL S
Sbjct: 268 -----PTEPISPTIEALILLHDKVLMAEVKRNHGGGMRCDELPVSENGDKSIRILCASEL 322
Query: 151 SANIIGKAGATIKRLRSKTRTSIKVTP--KDAS 181
++IGK+GA ++R+ +T IKV KDAS
Sbjct: 323 IGSVIGKSGANVRRVEQQTGARIKVQEIDKDAS 355
>gi|403174064|ref|XP_003333074.2| hypothetical protein PGTG_14860, partial [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
gi|375170814|gb|EFP88655.2| hypothetical protein PGTG_14860, partial [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
Length = 365
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 97/372 (26%), Positives = 161/372 (43%), Gaps = 69/372 (18%)
Query: 284 NTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDV 343
N P+ STG GA + + +R L + G +IGKGG T+ IR+ +G + V
Sbjct: 4 NGVPINSTG-------AGADPASNVTLRALVSTKEAGVIIGKGGKTVAEIREQTGTKAGV 56
Query: 344 DDTKDNRDECVITVTA-IESPDDIKSMAVEAVLLLQTKINDED---------DDTVTIRL 393
+ + +V+ +E K+ A+ A +LQ + D T IR+
Sbjct: 57 SKAVQGVHDRIFSVSGGLEGVS--KAYAIVAEAILQNPLAATDPALTVPPPTATTTIIRV 114
Query: 394 LVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDAL 453
LVS ++G IIG+ GS I EI+ + + SK P+ + + +VEV G ++R A+
Sbjct: 115 LVSHNLMGSIIGRQGSKIKEIQDTSGVRMVASKEMLPQ---STERVVEVQGAPDAIRVAI 171
Query: 454 VQIILRLRDDALKDRDGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPL---------- 503
+I L DD + + GT + P L + P
Sbjct: 172 HEIGKCLMDDWER----------------AHGTVLYQPGALGAEGPSAAYPGGVLAGGFG 215
Query: 504 ----GYDQRADSGSGIGMLSSSSLYG-------YGSLSMGDSPYGSMSSYSSKLYGGLPP 552
G+ S + +G + + L G Y S ++ + P+ S L LPP
Sbjct: 216 GANQGFSNGRRSSAPLGNANGNPLSGGARRASNYNSTNIENPPH---RSREGSLGASLPP 272
Query: 553 PLTLEVL------VPANAVGKVIGKAGSNLANIRKISGATIEMSDS-KSSRGDRVALISG 605
T +VL +P++ VG +IGK G+ + IR++SG+ I ++ + G+R+ I G
Sbjct: 273 ASTDQVLRTQNISIPSDMVGCIIGKGGAKINEIRRLSGSKISIAKTPHDESGERMFTIIG 332
Query: 606 TPEQKRAAENLI 617
+PE A L+
Sbjct: 333 SPEANEKALFLL 344
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 81/375 (21%), Positives = 143/375 (38%), Gaps = 59/375 (15%)
Query: 36 SVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKD-KE 94
+V R L G +IGK GK + IR++T + V G DR+ ++ ++ +
Sbjct: 20 NVTLRALVSTKEAGVIIGKGGKTVAEIREQTGTKAGVSKAVQGVHDRIFSVSGGLEGVSK 79
Query: 95 DVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANI 154
+ E + PL A AL + ++LV + +I
Sbjct: 80 AYAIVAEAILQNPLAATDPALTVPPPTATTTI---------------IRVLVSHNLMGSI 124
Query: 155 IGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAI 214
IG+ G+ IK ++ + + + + + T + V + G +A++ A+ I
Sbjct: 125 IGRQGSKIKEIQDTSGVRMVASKEMLPQST-------ERVVEVQGAPDAIRVAIHEIGKC 177
Query: 215 MYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNA----------DPILPSRSV 264
+ ++ R + P + P YP R
Sbjct: 178 L----------MDDWERAHGTVLYQPGALGAEGPSAAYPGGVLAGGFGGANQGFSNGRRS 227
Query: 265 PSILGAARVPDLQGYADTGNTW--------PVYSTGLSLVSGLVGASQSEELVIR-VLCP 315
+ LG A L G A + + P S SL + L AS + L + + P
Sbjct: 228 SAPLGNANGNPLSGGARRASNYNSTNIENPPHRSREGSLGASLPPASTDQVLRTQNISIP 287
Query: 316 FNKIGRVIGKGGGTIKSIRQASGAQIDVDDT-KDNRDECVITVTAIESPDDIKSMAVEAV 374
+ +G +IGKGG I IR+ SG++I + T D E + T+ I SP+ + +A+
Sbjct: 288 SDMVGCIIGKGGAKINEIRRLSGSKISIAKTPHDESGERMFTI--IGSPEANE----KAL 341
Query: 375 LLLQTKINDEDDDTV 389
LL ++ E + V
Sbjct: 342 FLLYNQLESEKERRV 356
>gi|196016215|ref|XP_002117961.1| hypothetical protein TRIADDRAFT_61998 [Trichoplax adhaerens]
gi|190579434|gb|EDV19529.1| hypothetical protein TRIADDRAFT_61998 [Trichoplax adhaerens]
Length = 364
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 140/313 (44%), Gaps = 40/313 (12%)
Query: 320 GRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQT 379
GR+IGKGG IKS R+ S A+I++ D + E ++TV P D +A L+
Sbjct: 58 GRIIGKGGAKIKSFREQSTARINISD--GSLPERIVTVNG---PID---AVCKAFKLICQ 109
Query: 380 KINDED----------DDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDK 429
K+ DED + T+ LL+ IIGK G + EIR+ T A V I+
Sbjct: 110 KL-DEDFRIINNSSKSEPTIKFDLLIPVPHCRSIIGKGGGTVKEIRESTGAQVSIASNVL 168
Query: 430 PKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRN-----PPVGADHIYSS 484
P +++D ++ + G ++ + ++ L + L + PP +
Sbjct: 169 P---NSSDRVMTITGSSSAISKCIQRLSQLLSELPLGQHVPYQPKPPNVPPTAFQNGQVH 225
Query: 485 GTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSS 544
++P P IPP L Y G + +++ + Y S+ + +MS+
Sbjct: 226 ELTFAVPGPFP-IPPHAQLPY------GPPVPVITQIAPYSVDIPSIVTQNFSAMSN--- 275
Query: 545 KLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALIS 604
GG T + +P + +G +IG+ G + IR+ISGA I+++ R IS
Sbjct: 276 ---GGTFARSTQLLKIPHDLIGCIIGRGGVKINEIRQISGANIKIASPNGDTTGRQVTIS 332
Query: 605 GTPEQKRAAENLI 617
GTPE AA+ LI
Sbjct: 333 GTPESISAAQYLI 345
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 132/321 (41%), Gaps = 39/321 (12%)
Query: 49 GSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPL 108
G +IGK G I S R+++ AR+ + D +R+VT+ + +D + +
Sbjct: 58 GRIIGKGGAKIKSFREQSTARINISDG--SLPERIVTV--------NGPIDAVCKAFKLI 107
Query: 109 CAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSK 168
C D ++ +N K + + +L+P +IIGK G T+K +R
Sbjct: 108 CQKLDEDFRI-----------INNSSKSEPTIKFDLLIPVPHCRSIIGKGGGTVKEIRES 156
Query: 169 TRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLET 228
T + + P S D + I+G S A+ K + +S ++ + + +P +
Sbjct: 157 TGAQVSIA--SNVLPNSS-----DRVMTITGSSSAISKCIQRLSQLLSELPLGQHVPYQP 209
Query: 229 TVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTWP- 287
PP+ + ++ P PI P +P VP + A P
Sbjct: 210 KPPNVPPTAF--QNGQVHELTFAVPGPFPIPPHAQLPY---GPPVPVITQIAPYSVDIPS 264
Query: 288 VYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTK 347
+ + S +S ++S +L + P + IG +IG+GG I IRQ SGA I +
Sbjct: 265 IVTQNFSAMSNGGTFARSTQL---LKIPHDLIGCIIGRGGVKINEIRQISGANIKI--AS 319
Query: 348 DNRDECVITVTAIESPDDIKS 368
N D VT +P+ I +
Sbjct: 320 PNGDTTGRQVTISGTPESISA 340
>gi|440634730|gb|ELR04649.1| hypothetical protein GMDG_06931 [Geomyces destructans 20631-21]
Length = 473
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 95/362 (26%), Positives = 159/362 (43%), Gaps = 62/362 (17%)
Query: 304 QSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESP 363
+S + IR + + VIGKGG + IR+ SGA+ V D + E ++TV+ +
Sbjct: 115 ESSWIHIRAVISSAEAATVIGKGGENVTLIRKMSGAKCTVSDYQKGAVERILTVSGV--- 171
Query: 364 DDIKSMAVEAVLLLQTKINDEDDD--------TVTIRLLVSSKVIGCIIGKSGSIINEIR 415
A +A L+ +N E D T +RLLV +IG IIGK G I EI+
Sbjct: 172 ---VDAAAKAFGLIIRTLNGEPLDQPSTPQSRTYPLRLLVPHVLIGSIIGKGGVRIREIQ 228
Query: 416 KRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPP 475
+++ A + S P + + V V+G +V A + L + L +R G P
Sbjct: 229 EQSGARLNASDACLPLSTERS---VVVLGVADAVHIATYYVASTLLEQ-LTERFGG---P 281
Query: 476 VGADHIYSSGT-------GISMPPLLPSIPPVGPLG-------------------YDQRA 509
+ + SG G+ + P +P P G G Y Q
Sbjct: 282 TASAYATRSGGPAGVIPGGMQVVPYVPQ-PAGGNYGHPDNVRHNDIRSRQTPAAQYGQPY 340
Query: 510 DSGSGIGMLSSSSLYG------YGSLS------MGDSPYGSMSSYSSKLYGGLPP--PLT 555
G G +S YG YG ++ +G S + ++ G+ P PLT
Sbjct: 341 AQGPGPQQGGASMHYGGSPAAGYGGVAPQQPQQVGHGGPASHAGPPAQPMQGVVPGQPLT 400
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAEN 615
++ +P + VG +IGK G+ + IR++SG+ I++++ + + +R+ I+GT E + A
Sbjct: 401 QQIYIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQDNSNERLVTITGTAECNQMALY 460
Query: 616 LI 617
++
Sbjct: 461 ML 462
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 34/52 (65%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTI 86
+ + +I P+ ++G++IGK G IN IRQ + + +K+ +P + +R+VTI
Sbjct: 397 QPLTQQIYIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQDNSNERLVTI 448
>gi|326511144|dbj|BAJ87586.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 450
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 99/183 (54%), Gaps = 15/183 (8%)
Query: 38 IYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVE 97
++R++ P +GS+IG+ G++I + +ET+ARV+V++ GA +R+V V KED
Sbjct: 52 VFRMVVPVLKVGSIIGRKGELIKRLVEETKARVRVLEGPVGATERIVL----VSAKEDPG 107
Query: 98 VDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEEC--QILVPSSQSANII 155
++ L A DAL++V + A + + C +++VP +Q+ N+I
Sbjct: 108 LE--------LPPAMDALIRVFKRVNGISDGAAEGTQTSAAPGVCAARLVVPGAQAINLI 159
Query: 156 GKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIM 215
GK GA+IK ++ T +I+V D + + + V I GE+E V KAL A+S +
Sbjct: 160 GKQGASIKAIQEGTGATIRVISVDERDRPFYVT-DDERIVEIQGETEKVLKALQAVSNHL 218
Query: 216 YKF 218
KF
Sbjct: 219 RKF 221
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 148/351 (42%), Gaps = 46/351 (13%)
Query: 309 VIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKS 368
V R++ P K+G +IG+ G IK + + + A++ V + E ++ V+A E P
Sbjct: 52 VFRMVVPVLKVGSIIGRKGELIKRLVEETKARVRVLEGPVGATERIVLVSAKEDPGLELP 111
Query: 369 MAVEAVLLLQTKINDEDDDTV------------TIRLLVSSKVIGCIIGKSGSIINEIRK 416
A++A++ + ++N D RL+V +IGK G+ I I++
Sbjct: 112 PAMDALIRVFKRVNGISDGAAEGTQTSAAPGVCAARLVVPGAQAINLIGKQGASIKAIQE 171
Query: 417 RTKADVR---ISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLR----DDALKDRD 469
T A +R + + D+P ++ +VE+ GE V AL + LR D ++
Sbjct: 172 GTGATIRVISVDERDRPFYVTDDERIVEIQGETEKVLKALQAVSNHLRKFLVDHSVLPLF 231
Query: 470 GSRNPPVGADHIYSSGTGISMPPL---------LPSI--PPVGPLGYDQRADSGSGIGML 518
N PV D S+ T MP P + V P+ D L
Sbjct: 232 EKTNAPVSQDR--SAETWNDMPHHSIVSTQVNQQPEVRDEYVLPMKRDHL--------YL 281
Query: 519 SSSSLYGYGSLSMGDSPYGSMSSYS----SKLYGGLP--PPLTLEVLVPANAVGKVIGKA 572
L + G S YG + S S ++G P +T + +P +IG
Sbjct: 282 EREPLVEHNIHRSGVSLYGRDPALSALRPSGMHGAGPLLTQITQTMQIPLTYAEDIIGVK 341
Query: 573 GSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFIMA 623
G+N+A IR SGA + + +S S D I GT Q ++A+ LIQ + A
Sbjct: 342 GANIAYIRANSGAVVTIQESLGSPDDITVEIKGTSSQVQSAQQLIQDSLAA 392
>gi|255554418|ref|XP_002518248.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223542595|gb|EEF44134.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 451
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 102/374 (27%), Positives = 167/374 (44%), Gaps = 53/374 (14%)
Query: 38 IYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVE 97
++R++ P +GS+IG+ G +I + ETRAR++V+D G DRVV I KEDVE
Sbjct: 62 VFRLIVPVLKVGSIIGRKGDLIKKMCDETRARIRVLDAPIGTPDRVVLI----SGKEDVE 117
Query: 98 VDDEFNDKEPLCAAQDALLKVHAAIANA-VANATDNDKKRKEKEECQILVPSSQSANIIG 156
PL A DA+++V ++ NA + ++LV S+Q+ N+IG
Sbjct: 118 A--------PLSPAMDAVIRVFKRVSGLPEGNAQELGAAGIAFSSIRLLVASTQAINLIG 169
Query: 157 KAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMY 216
K G+ IK ++ T S++V ++ E A + + V + GE+ V +AL AI +
Sbjct: 170 KQGSIIKSIQESTGASVRVLSEN--EVPFYVATD-ERIVDLQGEAMKVLEALEAIVGHLR 226
Query: 217 KFSPREDI-PL---------------ETTVREAPPSIIIPSDVPI-YPPGGLYPNADPIL 259
KF + PL ET + + I YP G D +L
Sbjct: 227 KFLVDHSVLPLFEKNYNALISLDRQAETWSDRSSFHTTSQGRIDIDYPLSG---KRDALL 283
Query: 260 PSRSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKI 319
R P ++VP L + G P S+ S V ++ + P +
Sbjct: 284 LERETPF---ESQVP-LSRISLYGQD-PAISSVRSSVFNRSSVPIVTQVTQTMQVPISYA 338
Query: 320 GRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVL---L 376
+IG G I+ IR+ SGA I V++++ DE ++ +IK A E + L
Sbjct: 339 EEIIGIRGNNIEYIRRTSGAIITVNESRGLPDEIIV---------EIKGTASEVQMAQQL 389
Query: 377 LQTKINDEDDDTVT 390
+Q +++ + + VT
Sbjct: 390 IQEFLSNHNKEPVT 403
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 157/347 (45%), Gaps = 48/347 (13%)
Query: 309 VIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKS 368
V R++ P K+G +IG+ G IK + + A+I V D + V+ ++ E + S
Sbjct: 62 VFRLIVPVLKVGSIIGRKGDLIKKMCDETRARIRVLDAPIGTPDRVVLISGKEDVEAPLS 121
Query: 369 MAVEAVLLLQTKINDEDDDTV-----------TIRLLVSSKVIGCIIGKSGSIINEIRKR 417
A++AV+ + +++ + +IRLLV+S +IGK GSII I++
Sbjct: 122 PAMDAVIRVFKRVSGLPEGNAQELGAAGIAFSSIRLLVASTQAINLIGKQGSIIKSIQES 181
Query: 418 TKADVRI-SKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRD-------------- 462
T A VR+ S+ + P ++ +V++ GE V +AL I+ LR
Sbjct: 182 TGASVRVLSENEVPFYVATDERIVDLQGEAMKVLEALEAIVGHLRKFLVDHSVLPLFEKN 241
Query: 463 -DALKDRDGSRNPPVGADHIYSSGTGISMPPLLPSIPPVG---PLGYDQRADSGSGIGML 518
+AL D R +D SS S + P G L ++ S + L
Sbjct: 242 YNALISLD--RQAETWSDR--SSFHTTSQGRIDIDYPLSGKRDALLLERETPFESQVP-L 296
Query: 519 SSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVL----VPANAVGKVIGKAGS 574
S SLYG ++SS S ++ P+ +V VP + ++IG G+
Sbjct: 297 SRISLYGQDP---------AISSVRSSVFNRSSVPIVTQVTQTMQVPISYAEEIIGIRGN 347
Query: 575 NLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFI 621
N+ IR+ SGA I +++S+ + + I GT + + A+ LIQ F+
Sbjct: 348 NIEYIRRTSGAIITVNESRGLPDEIIVEIKGTASEVQMAQQLIQEFL 394
>gi|386764188|ref|NP_001036268.2| IGF-II mRNA-binding protein, isoform K [Drosophila melanogaster]
gi|383293323|gb|ABI30974.2| IGF-II mRNA-binding protein, isoform K [Drosophila melanogaster]
Length = 631
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 157/341 (46%), Gaps = 58/341 (17%)
Query: 298 GLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITV 357
G+ G + + +R+L +G +IG+ G TI++I Q S A++DV K+N ++
Sbjct: 126 GMPGPGRQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHR-KENVGSLEKSI 184
Query: 358 TAIESPDD--------IKSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGS 409
T +P++ ++ M EA+ + +++ E + + +++L + +IG IIGKSG+
Sbjct: 185 TIYGNPENCTNACKRILEVMQQEAISTNKGELSPECSE-ICLKILAHNNLIGRIIGKSGN 243
Query: 410 IINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRD 469
I I + T + +S + + + ++ V G + ++ A QI +LR D
Sbjct: 244 TIKRIMQDTDTKITVSSINDINSFNL-ERIITVKGLIENMSRAENQISTKLRQSYENDLQ 302
Query: 470 GSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSL 529
+M P P + P+ S G GM+ ++S+
Sbjct: 303 -------------------AMAPQSLMFPGLHPMAMM----STPGNGMVFNTSM------ 333
Query: 530 SMGDSPYGSMSSYS-SKLYGGLPPPL-------TLEVLVPANAVGKVIGKAGSNLANIRK 581
P+ S S++ SK + PP+ T + +P NAVG +IG GS++ +I +
Sbjct: 334 -----PFPSCQSFAMSKTPASVVPPVFPNDLQETTYLYIPNNAVGAIIGTRGSHIRSIMR 388
Query: 582 ISGATIEMSDSKS-----SRGDRVALISGTPEQKRAAENLI 617
S A+++++ + + +R I GTPE + A+ +I
Sbjct: 389 FSNASLKIAPLDADKPLDQQTERKVTIVGTPEGQWKAQYMI 429
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 104/455 (22%), Positives = 198/455 (43%), Gaps = 68/455 (14%)
Query: 12 RDNDRDGKNQKRRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVK 71
++ R +NQ+ G + RIL ++G++IG+ G I +I Q++RARV
Sbjct: 111 KNQRRSQRNQRNPYPGMPGPGRQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVD 170
Query: 72 VV-DPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANAT 130
V G+ ++ +TIY + ++ C +A ++ + +
Sbjct: 171 VHRKENVGSLEKSITIYGNPEN----------------CT--NACKRILEVMQQEAISTN 212
Query: 131 DNDKKRKEKEEC-QILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAM 189
+ + E C +IL ++ IIGK+G TIKR+ T T I V+ + +
Sbjct: 213 KGELSPECSEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITVSSINDIN-----SF 267
Query: 190 EFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPG 249
+ + + G E + +A IS + + S D+ AP S++ P ++P
Sbjct: 268 NLERIITVKGLIENMSRAENQISTKLRQ-SYENDLQA-----MAPQSLMFPG---LHPMA 318
Query: 250 GLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELV 309
+ + ++ + S+P P Q +A + T S+V + E
Sbjct: 319 MMSTPGNGMVFNTSMP-------FPSCQSFA-------MSKTPASVVPPVFPNDLQETTY 364
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQ-----IDVDDTKDNRDECVITVTAIESPD 364
+ + P N +G +IG G I+SI + S A +D D D + E +T+ + +P+
Sbjct: 365 LYI--PNNAVGAIIGTRGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTI--VGTPE 420
Query: 365 DIKSMAVEAVLLLQTKINDE------DDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRT 418
+A ++ K+ +E DD +T+ LLV+S +G IIGK G + E+++ T
Sbjct: 421 G----QWKAQYMIFEKMREEGFMCGTDDVRLTVELLVASSQVGRIIGKGGQNVRELQRVT 476
Query: 419 KADVRISKGDKPKCADANDEL-VEVVGEVGSVRDA 452
+ +++ + + ++E V ++G SV+ A
Sbjct: 477 GSVIKLPEHALAPPSGGDEETPVHIIGLFYSVQSA 511
Score = 38.9 bits (89), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 30/38 (78%)
Query: 554 LTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSD 591
LT+E+LV ++ VG++IGK G N+ +++++G+ I++ +
Sbjct: 447 LTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIKLPE 484
>gi|405977635|gb|EKC42074.1| Poly(rC)-binding protein 3 [Crassostrea gigas]
Length = 439
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 153/345 (44%), Gaps = 58/345 (16%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
L +R++ ++G +IGK G IK R+ SGA+I++ D + E ++TVT + + I
Sbjct: 12 LTVRMIMQGKEVGSIIGKKGDNIKKFREDSGAKINISD--GSCPERIVTVTG--TTECIH 67
Query: 368 SMAVEAVLLLQTKINDEDDDT-------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTKA 420
+A ++ K ++ +T VT+RL+V + G +IGK GS I EIR+ T A
Sbjct: 68 ----KAFTMICKKFEEDLQNTPTVPKPPVTLRLVVPASQCGSLIGKGGSKIKEIRETTGA 123
Query: 421 DVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNP-PVGAD 479
++++ P ++ + V V G ++ + I + + K P PV
Sbjct: 124 SIQVASEMLP---NSTERAVTVSGTADAITLCIQNICSIMLESPPKGATIQYRPKPVVPP 180
Query: 480 HIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSM 539
I++ G ++P + G GI + S L+ LS+G P +
Sbjct: 181 VIFAGGQAYTVPGQM--------QGVQASEKERLGIPKMELSKLH---QLSLGQ-PIPII 228
Query: 540 SSYSSKLYGGLPPPL---------------------------TLEVLVPANAVGKVIGKA 572
S +L P L T E+ +P + +G +IG+
Sbjct: 229 PCTSPQLIQATMPGLPHMAAAYPRATNTVPQALPAQPQQQQTTTEMAIPNDLIGCIIGRG 288
Query: 573 GSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLI 617
G + IR++SGA I++S+++ DR I+GTPE A+ LI
Sbjct: 289 GQKINEIRQMSGAMIKISNAEEGAPDRKVTITGTPETIGLAQYLI 333
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 76/345 (22%), Positives = 137/345 (39%), Gaps = 67/345 (19%)
Query: 48 IGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEP 107
+GS+IGK G I R+++ A++ + D +R+VT+
Sbjct: 23 VGSIIGKKGDNIKKFREDSGAKINISDG--SCPERIVTVT-------------------- 60
Query: 108 LCAAQDALLKVHAAIANAVANATDNDKK-RKEKEECQILVPSSQSANIIGKAGATIKRLR 166
+ + K I N K +++VP+SQ ++IGK G+ IK +R
Sbjct: 61 --GTTECIHKAFTMICKKFEEDLQNTPTVPKPPVTLRLVVPASQCGSLIGKGGSKIKEIR 118
Query: 167 SKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPL 226
T SI+V + T + V +SG ++A+ + I +IM + SP + +
Sbjct: 119 ETTGASIQVASEMLPNST-------ERAVTVSGTADAITLCIQNICSIMLE-SPPKGATI 170
Query: 227 ETTVREAPPSIIIPSDVPIYPPGGL------------YPNAD-------------PILPS 261
+ + P +I PG + P + PI+P
Sbjct: 171 QYRPKPVVPPVIFAGGQAYTVPGQMQGVQASEKERLGIPKMELSKLHQLSLGQPIPIIPC 230
Query: 262 RSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGR 321
S P ++ A + G +P + ++ L Q ++ + P + IG
Sbjct: 231 TS-PQLIQAT----MPGLPHMAAAYPRATN--TVPQALPAQPQQQQTTTEMAIPNDLIGC 283
Query: 322 VIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
+IG+GG I IRQ SGA I + + ++ + +T+T +P+ I
Sbjct: 284 IIGRGGQKINEIRQMSGAMIKISNAEEGAPDRKVTITG--TPETI 326
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 29/43 (67%)
Query: 44 PDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTI 86
P+ +IG +IG+ G+ IN IRQ + A +K+ + GA DR VTI
Sbjct: 277 PNDLIGCIIGRGGQKINEIRQMSGAMIKISNAEEGAPDRKVTI 319
>gi|325093144|gb|EGC46454.1| KH domain RNA binding protein [Ajellomyces capsulatus H88]
Length = 499
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 93/366 (25%), Positives = 161/366 (43%), Gaps = 66/366 (18%)
Query: 304 QSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESP 363
+S + IR + + IGKGG + IR+ SGA+ V D E ++TV+ ++
Sbjct: 133 ESGWIHIRAVISSAEAATCIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSGMQD- 191
Query: 364 DDIKSMAVEAVLLLQTKINDE--------DDDTVTIRLLVSSKVIGCIIGKSGSIINEIR 415
+A L+ +N+E T +RLL+ +IG IIGKSG I EI+
Sbjct: 192 -----AVAKAFGLIIRTLNNEPLEAPSTAQSKTYPLRLLIPHLLIGSIIGKSGVRIREIQ 246
Query: 416 KRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPP 475
+ + A + S P + + + ++G +V A + + L + L +R G P
Sbjct: 247 EASGARLNASDSCLPL---STERTLVILGVADAVHIATYYVAVTLVEQ-LTERFGG---P 299
Query: 476 VGADHIYSSGTG-------ISMPPLLPSIPPVGPLGY----------DQRADSGSGIGM- 517
+ + SG + + P +P P G G+ R S G G+
Sbjct: 300 AASAYATRSGGAAGVVPGGMQVVPYVPQ-PAGGQYGHPDTFKRHQPPGNRVVSTGGYGVP 358
Query: 518 -----------------LSSSSLYGY-GSLSMGDSPYGS------MSSYSSKLYGGLPP- 552
SSS GY G+ +PYG+ S++ GG+ P
Sbjct: 359 YVHGQPGQPQMPHQALHYGSSSRPGYSGAGPHQPAPYGAPQPAPVHGGPSAQPAGGVVPG 418
Query: 553 -PLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKR 611
P+T ++ +P + VG +IGK G+ + IR +SG+ I++++ + + +R+ I+GTPE +
Sbjct: 419 APVTQQIFIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQDNSNERLVTITGTPECNQ 478
Query: 612 AAENLI 617
A ++
Sbjct: 479 MALYML 484
Score = 40.0 bits (92), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 32/50 (64%)
Query: 37 VIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTI 86
V +I P+ ++G++IGK G IN IR + + +K+ +P + +R+VTI
Sbjct: 421 VTQQIFIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQDNSNERLVTI 470
>gi|147807331|emb|CAN73002.1| hypothetical protein VITISV_044056 [Vitis vinifera]
Length = 1121
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 86/169 (50%), Gaps = 8/169 (4%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
E V R+L P K+G +IG+ G IK + + + A+I + D E + V+A E PD
Sbjct: 39 ENVFRMLIPVQKVGYIIGRKGEHIKKLSEETKARIKILDGPPGTSERAVMVSAKEEPDAP 98
Query: 367 KSMAVEAVLLLQTKINDEDDDT-------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
+ A++ +L + I D + D V+ RLLV + G +IGK G+ I I++ +
Sbjct: 99 IAPAIDGLLRVHKCIMDVESDVPSAAGVMVSTRLLVVAAQAGSLIGKQGATIKSIQEASN 158
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDR 468
VR+ + P A ND +VE+ GE SV A+ I LR L DR
Sbjct: 159 CIVRVLGENLPLFALQNDTVVEIQGEPASVHKAVELIASNLR-KFLVDR 206
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 95/181 (52%), Gaps = 19/181 (10%)
Query: 38 IYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVE 97
++R+L P +G +IG+ G+ I + +ET+AR+K++D PG +R V + + K++ D
Sbjct: 41 VFRMLIPVQKVGYIIGRKGEHIKKLSEETKARIKILDGPPGTSERAVMVSA--KEEPDA- 97
Query: 98 VDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGK 157
P+ A D LL+VH I + +D ++LV ++Q+ ++IGK
Sbjct: 98 ---------PIAPAIDGLLRVHKCIMDV---ESDVPSAAGVMVSTRLLVVAAQAGSLIGK 145
Query: 158 AGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYK 217
GATIK ++ + ++V E A++ D V I GE +V KA+ I++ + K
Sbjct: 146 QGATIKSIQEASNCIVRVL----GENLPLFALQNDTVVEIQGEPASVHKAVELIASNLRK 201
Query: 218 F 218
F
Sbjct: 202 F 202
>gi|225563195|gb|EEH11474.1| KH domain RNA binding protein [Ajellomyces capsulatus G186AR]
gi|240275775|gb|EER39288.1| KH domain RNA-binding protein [Ajellomyces capsulatus H143]
Length = 495
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 93/366 (25%), Positives = 161/366 (43%), Gaps = 66/366 (18%)
Query: 304 QSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESP 363
+S + IR + + IGKGG + IR+ SGA+ V D E ++TV+ ++
Sbjct: 133 ESGWIHIRAVISSAEAATCIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSGMQD- 191
Query: 364 DDIKSMAVEAVLLLQTKINDE--------DDDTVTIRLLVSSKVIGCIIGKSGSIINEIR 415
+A L+ +N+E T +RLL+ +IG IIGKSG I EI+
Sbjct: 192 -----AVAKAFGLIIRTLNNEPLEAPSTAQSKTYPLRLLIPHLLIGSIIGKSGVRIREIQ 246
Query: 416 KRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPP 475
+ + A + S P + + + ++G +V A + + L + L +R G P
Sbjct: 247 EASGARLNASDSCLPL---STERTLVILGVADAVHIATYYVAVTLVEQ-LTERFGG---P 299
Query: 476 VGADHIYSSGTG-------ISMPPLLPSIPPVGPLGY----------DQRADSGSGIGM- 517
+ + SG + + P +P P G G+ R S G G+
Sbjct: 300 AASAYATRSGGAAGVVPGGMQVVPYVPQ-PAGGQYGHPDTFKRHQPPGNRVVSTGGYGVP 358
Query: 518 -----------------LSSSSLYGY-GSLSMGDSPYGS------MSSYSSKLYGGLPP- 552
SSS GY G+ +PYG+ S++ GG+ P
Sbjct: 359 YVHGQPGQPQMPHQALHYGSSSRPGYSGAGPHQPAPYGAPQPAPVHGGPSAQPAGGVVPG 418
Query: 553 -PLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKR 611
P+T ++ +P + VG +IGK G+ + IR +SG+ I++++ + + +R+ I+GTPE +
Sbjct: 419 APVTQQIFIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQDNSNERLVTITGTPECNQ 478
Query: 612 AAENLI 617
A ++
Sbjct: 479 MALYML 484
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 88/421 (20%), Positives = 166/421 (39%), Gaps = 94/421 (22%)
Query: 13 DNDRDGKNQKRRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKV 72
NDR + +DE G + R + + IGK G+ ++ IR+ + A+ V
Sbjct: 116 QNDRSSSQPPSQHATQDESG---WIHIRAVISSAEAATCIGKGGENVSQIRRLSGAKCTV 172
Query: 73 VDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANA--T 130
D GA +R++T+ QDA+ K I + N
Sbjct: 173 SDYSRGAVERILTV----------------------SGMQDAVAKAFGLIIRTLNNEPLE 210
Query: 131 DNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSC-AM 189
+ + ++L+P +IIGK+G I+ ++ + + +AS+ SC +
Sbjct: 211 APSTAQSKTYPLRLLIPHLLIGSIIGKSGVRIREIQEASGARL-----NASD---SCLPL 262
Query: 190 EFDNFVLISGESEAVKKALFAIS-AIMYKFSPREDIPLETTVREAPPSI---------II 239
+ ++I G ++AV A + ++ ++ + + R P + ++
Sbjct: 263 STERTLVILGVADAVHIATYYVAVTLVEQLTERFGGPAASAYATRSGGAAGVVPGGMQVV 322
Query: 240 PSDVPIYPPGGLYPNADPILPSR------------SVPSILGAARVPDL----------- 276
P VP P GG Y + D + VP + G P +
Sbjct: 323 PY-VP-QPAGGQYGHPDTFKRHQPPGNRVVSTGGYGVPYVHGQPGQPQMPHQALHYGSSS 380
Query: 277 -QGYADTG----------NTWPVYSTGLSLVSGLV--GASQSEELVIRVLCPFNKIGRVI 323
GY+ G PV+ + +G V GA ++++ I P + +G +I
Sbjct: 381 RPGYSGAGPHQPAPYGAPQPAPVHGGPSAQPAGGVVPGAPVTQQIFI----PNDMVGAII 436
Query: 324 GKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKIND 383
GKGG I IR SG+ I +++ +DN +E ++T+T + + A+ +L +++
Sbjct: 437 GKGGAKINEIRHLSGSVIKINEPQDNSNERLVTITGTPECNQM------ALYMLYSRLES 490
Query: 384 E 384
E
Sbjct: 491 E 491
>gi|55742577|ref|NP_998282.1| poly(rC)-binding protein 4 [Danio rerio]
gi|33604078|gb|AAH56323.1| Zgc:65870 [Danio rerio]
gi|41946775|gb|AAH65955.1| Zgc:65870 [Danio rerio]
Length = 442
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 158/348 (45%), Gaps = 61/348 (17%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDD--------TKDNRDECVI---T 356
L +R+L ++G +IGK G T+K IR+ S A+I++ + T ECV T
Sbjct: 5 LTLRLLMHGKEVGSIIGKKGETVKRIREESSARINISEGSCPERIITITGATECVFRAFT 64
Query: 357 VTAIESPDDIKSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
+ I+ +D+ ++ + VT+RL++ + G +IGK GS I EIR+
Sbjct: 65 MITIKLEEDLAALVANGTV--------TSKPPVTLRLVIPASQCGSLIGKGGSKIKEIRE 116
Query: 417 RTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPV 476
+T A V+++ P ++ + V + G +DA++Q + + L+ +PP
Sbjct: 117 KTGAQVQVAGDLLP---NSTERGVTISGS----QDAIIQCVKLICTVILE------SPPK 163
Query: 477 GA-----------------DHIYSSGTGISMPPLLPSIPPVGPLGYD-QRADSGSGIGML 518
GA + ++ + S P + V G D Q+A + +
Sbjct: 164 GATIPYRPSPAPGAVLLAGNQVFETSEFASHP-----LFSVAQGGLDLQQAYTVQNQYGI 218
Query: 519 SSSSLYGYGSLSM--GDSPYGSMSSYSSKLYGGL---PPPLTLEVLVPANAVGKVIGKAG 573
S L LSM G P + ++ + L G+ + E+L+P + +G +IG+ G
Sbjct: 219 PHSELAKLHQLSMQQGLGPI-AQATATQVLPAGIESSSQTASQELLIPNDLIGSIIGRQG 277
Query: 574 SNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFI 621
+ + IR++SGA I++ S DR I+G+P A+ LI + +
Sbjct: 278 TKINEIRQVSGAQIKIGSQLDSTSDRHVTITGSPISINLAQYLITSCL 325
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 152/339 (44%), Gaps = 50/339 (14%)
Query: 36 SVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKED 95
++ R+L +GS+IGK G+ + IR+E+ AR+ + + +R++TI
Sbjct: 4 TLTLRLLMHGKEVGSIIGKKGETVKRIREESSARINISEG--SCPERIITITG------- 54
Query: 96 VEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANII 155
+ F A +K+ +A VAN T K ++++P+SQ ++I
Sbjct: 55 -ATECVFR------AFTMITIKLEEDLAALVANGTVTSKP---PVTLRLVIPASQCGSLI 104
Query: 156 GKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIM 215
GK G+ IK +R KT ++V T + V ISG +A+ + + I ++
Sbjct: 105 GKGGSKIKEIREKTGAQVQVAGDLLPNST-------ERGVTISGSQDAIIQCVKLICTVI 157
Query: 216 YKFSPR-EDIPLETTVREAPPSIIIP-------SDVPIYP-----PGGL-YPNADPILPS 261
+ P+ IP + AP ++++ S+ +P GGL A +
Sbjct: 158 LESPPKGATIPYRPS--PAPGAVLLAGNQVFETSEFASHPLFSVAQGGLDLQQAYTVQNQ 215
Query: 262 RSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQ--SEELVIRVLCPFNKI 319
+P A++ L G +T + L +G+ +SQ S+EL+I P + I
Sbjct: 216 YGIPHS-ELAKLHQLSMQQGLGPIAQATATQV-LPAGIESSSQTASQELLI----PNDLI 269
Query: 320 GRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
G +IG+ G I IRQ SGAQI + D+ + +T+T
Sbjct: 270 GSIIGRQGTKINEIRQVSGAQIKIGSQLDSTSDRHVTIT 308
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 6/76 (7%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+T+RLL+ K +G IIGK G + IR+ + A + IS+G P + ++ + G
Sbjct: 4 TLTLRLLMHGKEVGSIIGKKGETVKRIREESSARINISEGSCP------ERIITITGATE 57
Query: 448 SVRDALVQIILRLRDD 463
V A I ++L +D
Sbjct: 58 CVFRAFTMITIKLEED 73
>gi|345311367|ref|XP_001520914.2| PREDICTED: poly(rC)-binding protein 4-like [Ornithorhynchus
anatinus]
Length = 447
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 97/359 (27%), Positives = 158/359 (44%), Gaps = 73/359 (20%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
L +R+L ++G +IGK G T+K IR+ S A+I + + + E + T+T
Sbjct: 17 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE--GSCPERITTITGS------T 68
Query: 368 SMAVEAVLLLQTKINDEDDDT------------VTIRLLVSSKVIGCIIGKSGSIINEIR 415
AV ++ K+ DED T VT+RL++ + G +IGK+G+ I EIR
Sbjct: 69 GAVFHAVSMIAFKL-DEDLCTGPPNGGSVSKPPVTLRLVIPASQCGSLIGKAGAKIKEIR 127
Query: 416 KRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPP 475
+ T A V+++ P ++ + V V G V DA++ + ++ L+ +PP
Sbjct: 128 ESTGAQVQVAGDLLP---NSTERAVTVSG----VPDAIILCVRQICAVILE------SPP 174
Query: 476 VGADHIYSSGTGISMPPLLPSIPPVGPLGYD----------QRADSGSGIGMLSSSSLYG 525
GA Y +S+ +L S V + + + GSG L G
Sbjct: 175 KGATIPYHPS--LSLGTVLLSTNQVANIAIQKQERGSNRQYHQVEHGSG----QPGKLRG 228
Query: 526 YG-------SLSMGDSPYGSMSSYSSKLYGGLPPPLT----------------LEVLVPA 562
G ++SMG P + G P P T E LVP
Sbjct: 229 NGQEAVEVAAVSMGPLPPPEPKVSKLQQLSGPPVPFTSPSVVPGLDPGAQTSSQEFLVPN 288
Query: 563 NAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFI 621
+ +G VIG+ GS ++ IR++SGA I++ + G+R I+G+P A+ LI A +
Sbjct: 289 DLIGCVIGRQGSKISEIRQMSGAHIKIGNQTEGSGERHVTITGSPVSIALAQYLITACL 347
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 80/196 (40%), Gaps = 26/196 (13%)
Query: 26 NEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVT 85
N DE ++ R+L +GS+IGK G+ + IR+++ AR+ + + +R+ T
Sbjct: 6 NGLDEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITT 63
Query: 86 IYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQIL 145
I F E LC + K +++
Sbjct: 64 ITGSTGAVFHAVSMIAFKLDEDLCTGPP-----------------NGGSVSKPPVTLRLV 106
Query: 146 VPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVK 205
+P+SQ ++IGKAGA IK +R T ++V T + V +SG +A+
Sbjct: 107 IPASQCGSLIGKAGAKIKEIRESTGAQVQVAGDLLPNST-------ERAVTVSGVPDAII 159
Query: 206 KALFAISAIMYKFSPR 221
+ I A++ + P+
Sbjct: 160 LCVRQICAVILESPPK 175
>gi|363747261|ref|XP_003643959.1| PREDICTED: poly(rC)-binding protein 2-like isoform 1 [Gallus
gallus]
Length = 348
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 166/352 (47%), Gaps = 40/352 (11%)
Query: 297 SGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVIT 356
+G++ + L IR+L ++G +IGK G ++K +R+ SGA+I++ + N E +IT
Sbjct: 3 TGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIIT 60
Query: 357 VTAIESPDDIKSMAVEAVL-LLQTKINDEDDDT-------VTIRLLVSSKVIGCIIGKSG 408
+ P + A ++ L+ I+ ++ VT+RL+V + G +IGK G
Sbjct: 61 LAG---PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGG 117
Query: 409 SIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKD- 467
I EIR+ T A V+++ P ++ + + + G S+ + + QI + + + K
Sbjct: 118 CKIKEIRESTGAQVQVAGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLESPPKGV 174
Query: 468 ----RDGSRNPPV---GADHIYSSGTGISMPPLLPSIPPVGPL-GYDQRADSGSGIGMLS 519
R + PV G YSSG+ S P PS+ L G Q A + G +
Sbjct: 175 TIPYRPKPSSSPVIFAGGQDRYSSGSA-SYPHTAPSMCLNSDLEGPPQEAYTIQGQYAIP 233
Query: 520 SSSLYGYGSLSM---------GDSPYGSMSSYSSKL--YGGL---PPPLTLEVLVPANAV 565
L L+M G++ + + S S ++ Y GL + E+ +P + +
Sbjct: 234 QPDLTKLHQLAMQQSHFPMSHGNTGFSGIESSSPEVKGYWGLDASAQTTSHELTIPNDLI 293
Query: 566 GKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLI 617
G +IG+ G+ + IR++SGA I++++ DR I+G+ A+ LI
Sbjct: 294 GCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLI 345
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 85/370 (22%), Positives = 153/370 (41%), Gaps = 85/370 (22%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH 89
E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R++T
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIIT---- 60
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAV-----ANATDNDKKRKEKEECQI 144
L +A+ K A I + + ++ T++ + ++
Sbjct: 61 ------------------LAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRL 102
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAV 204
+VP+SQ ++IGK G IK +R T ++V T + + I+G +++
Sbjct: 103 VVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNST-------ERAITIAGIPQSI 155
Query: 205 KKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGL---------YPNA 255
+ + I +M + P+ T+ P PS P+ GG YP+
Sbjct: 156 IECVKQICVVMLESPPK-----GVTIPYRPK----PSSSPVIFAGGQDRYSSGSASYPHT 206
Query: 256 DPIL--------PSRSVPSILGAARVPD-----LQGYADTGNTWPVY--STGLSLVS--- 297
P + P + +I G +P L A + +P+ +TG S +
Sbjct: 207 APSMCLNSDLEGPPQEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMSHGNTGFSGIESSS 266
Query: 298 -------GLVGASQ--SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD 348
GL ++Q S EL I P + IG +IG+ G I IRQ SGAQI + + +
Sbjct: 267 PEVKGYWGLDASAQTTSHELTI----PNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE 322
Query: 349 NRDECVITVT 358
+ +T+T
Sbjct: 323 GSTDRQVTIT 332
>gi|357479529|ref|XP_003610050.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355511105|gb|AES92247.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 431
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 102/195 (52%), Gaps = 18/195 (9%)
Query: 26 NEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVT 85
+EK G ++R++ P +G +IG+ G++I +ET AR++V+D G DR+V
Sbjct: 33 SEKRWPGWPGHCVFRLIVPVVKVGIIIGRKGELIKKTCEETHARIRVLDAPVGTPDRIVL 92
Query: 86 IYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQI- 144
I KED+E PL A DA+L++ ++ ++ +N+ C I
Sbjct: 93 I----SGKEDLEA--------PLSPAMDAILRIFKRVS-GLSETDNNNTAAAGVALCSIR 139
Query: 145 -LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEA 203
LV S+Q+ N+IGK G++IK ++ T I+V D P+++ A E + + GE+
Sbjct: 140 LLVASTQAINLIGKQGSSIKAIQENTGAVIRVLSGD-ELPSYAGADE--RIIDLQGETLK 196
Query: 204 VKKALFAISAIMYKF 218
V KAL A+ + KF
Sbjct: 197 VLKALEAVVGHLRKF 211
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 155/340 (45%), Gaps = 36/340 (10%)
Query: 309 VIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKS 368
V R++ P K+G +IG+ G IK + + A+I V D + ++ ++ E + S
Sbjct: 45 VFRLIVPVVKVGIIIGRKGELIKKTCEETHARIRVLDAPVGTPDRIVLISGKEDLEAPLS 104
Query: 369 MAVEAVLLLQTKIN--DEDDDTVT---------IRLLVSSKVIGCIIGKSGSIINEIRKR 417
A++A+L + +++ E D+ T IRLLV+S +IGK GS I I++
Sbjct: 105 PAMDAILRIFKRVSGLSETDNNNTAAAGVALCSIRLLVASTQAINLIGKQGSSIKAIQEN 164
Query: 418 TKADVRISKGDK-PKCADANDELVEVVGEVGSVRDALVQIILRLRD-------------- 462
T A +R+ GD+ P A A++ ++++ GE V AL ++ LR
Sbjct: 165 TGAVIRVLSGDELPSYAGADERIIDLQGETLKVLKALEAVVGHLRKFLVDSSVIPLFEKT 224
Query: 463 -DALKDRDGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSS 521
+A +D + +YS+ S P ++ IP + R + S+
Sbjct: 225 CNATISQDRQTDAWADKPSLYSA----SQPSIVADIPTKRDSFFADRESQLDSLLSSSTM 280
Query: 522 SLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRK 581
SLYG S S+ + + S+ + + + +P + +IG G+N+ IR+
Sbjct: 281 SLYGQDSSSISGLRSSAFNRASASIVTTVIQTMQ----IPLSYAEDIIGIQGTNIDYIRR 336
Query: 582 ISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFI 621
SGA + + +S+ + + I GT Q + A+ LIQ I
Sbjct: 337 TSGAILTVQESRVP-DEIIVEIKGTSTQVQTAQQLIQEVI 375
>gi|313245372|emb|CBY40123.1| unnamed protein product [Oikopleura dioica]
Length = 412
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 149/323 (46%), Gaps = 39/323 (12%)
Query: 300 VGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQA--SGAQIDVDDTKDNRDECVITV 357
GA S + +++L P + +G +IGKGG T++ I Q S A++DV + + V T+
Sbjct: 30 FGARGSPDTPLKMLVPASVVGAIIGKGGSTVRQITQLKDSRARVDVHRREGPGSDKVATI 89
Query: 358 TAIESPDDIKSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKR 417
+P+ + A+ +L+ +E D+ + +++L + +IG +IG+ G + ++ +
Sbjct: 90 YG--APE---ACGAAAIRILEIVRKEEKDNELPLKVLAHNALIGRLIGRDGRNLKHVQDK 144
Query: 418 TKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRD---DALKDRDGSRNP 474
T + IS + + D + + GEV + +A QI +LR D S P
Sbjct: 145 TGTRIAISSMHELSPYNM-DRTISIHGEVKGISEAEQQITEKLRQFETDMAAMSQQSLYP 203
Query: 475 PVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDS 534
+ + + M P L S P P Y+ +S Y + ++S
Sbjct: 204 GLNSQQM-------QMFPGLQS--PTAPPAYN-----------VSYQGSYFFKNVSQSVF 243
Query: 535 PYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS 594
G+ SS +++ T+ +L+P+ AVG +IG G+++ NI +I+GA+I + +
Sbjct: 244 FSGNSSSNNTQE--------TVTLLIPSGAVGAIIGSRGTHIRNISRIAGASIRIHVNAD 295
Query: 595 SRGDRVALISGTPEQKRAAENLI 617
I G PE + A+ I
Sbjct: 296 RDAKARVTIVGVPESQWKAQFCI 318
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 98/438 (22%), Positives = 180/438 (41%), Gaps = 82/438 (18%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQ--ETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVE 97
++L P V+G++IGK G + I Q ++RARV V D+V TIY
Sbjct: 41 KMLVPASVVGAIIGKGGSTVRQITQLKDSRARVDVHRREGPGSDKVATIY---------- 90
Query: 98 VDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEE----CQILVPSSQSAN 153
E AA +L++ RKE+++ ++L ++
Sbjct: 91 -----GAPEACGAAAIRILEI----------------VRKEEKDNELPLKVLAHNALIGR 129
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISA 213
+IG+ G +K ++ KT T I ++ P + D + I GE + + +A I+
Sbjct: 130 LIGRDGRNLKHVQDKTGTRIAISSMHELSPYN-----MDRTISIHGEVKGISEAEQQITE 184
Query: 214 IMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARV 273
+ +F ET + S +YP GL + P P+ A V
Sbjct: 185 KLRQF--------ETDMAAM-------SQQSLYP--GLNSQQMQMFPGLQSPTAPPAYNV 227
Query: 274 PDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSI 333
Y + V+ +G S +S + + + +L P +G +IG G I++I
Sbjct: 228 SYQGSYFFKNVSQSVFFSGNS-------SSNNTQETVTLLIPSGAVGAIIGSRGTHIRNI 280
Query: 334 RQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKINDEDDDTVTIRL 393
+ +GA I + D + +T+ + + L + +E+ +T ++
Sbjct: 281 SRIAGASIRIHVNADRDAKARVTIVGVPESQWKAQFCIFDKLKQEGWFGNEEGR-LTTQI 339
Query: 394 LVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADAN--DEL-VEVVGEVGS-- 448
+ K++G IIGK G + E+++ T ++V I P+ + N +E+ V + G S
Sbjct: 340 TIPGKLVGRIIGKGGVNVRELQRITSSEVTI-----PRQGELNTSEEIPVSITGTFFSNQ 394
Query: 449 -----VRDALVQIILRLR 461
+RD + + I R+R
Sbjct: 395 SAQRKIRDLVGREIARMR 412
>gi|70989551|ref|XP_749625.1| KH domain RNA binding protein [Aspergillus fumigatus Af293]
gi|66847256|gb|EAL87587.1| KH domain RNA binding protein [Aspergillus fumigatus Af293]
Length = 464
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 158/368 (42%), Gaps = 70/368 (19%)
Query: 304 QSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESP 363
+S + IR + + VIGKGG + IR+ SGA+ V D E ++TV+ P
Sbjct: 108 ESSWIHIRAVISSQEAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSG---P 164
Query: 364 DDIKSMAVEAVLLLQTKINDEDDD--------TVTIRLLVSSKVIGCIIGKSGSIINEIR 415
D + A L+++T +N+E D T +RLL+ +IG IIGK GS I EI+
Sbjct: 165 QDAVAKAFG--LIIRT-LNNEPLDAPSTAQSKTYPLRLLIPHLLIGSIIGKGGSRIREIQ 221
Query: 416 KRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPP 475
+ + A R++ D + LV ++G SV A + + L + L +R G P
Sbjct: 222 EASGA--RLNASDSCLPLSSERSLV-ILGVADSVHIATYYVAVTLVEQ-LTERFGG---P 274
Query: 476 VGADHIYSS-------GTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYG--- 525
+ + S G+ + P +P P G G+ + +++ YG
Sbjct: 275 AASAYATRSGGPAGAVPGGMQVVPYVPQ-PAGGQYGHPEHFKRHHHHPNRAAAGAYGVPY 333
Query: 526 ----------------YGSLSMGDSPYGSMSSYSSKLYGGLPP----------------- 552
YG+ +PY + YG P
Sbjct: 334 LHGQPAPAPVAQPALHYGAAP--HAPYAGAGPHQPAPYGAPQPAQARGAPTPATPVGGVM 391
Query: 553 ---PLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQ 609
PLT ++ +P + VG +IGK G+ + IR +SG+ I++++ + + +R+ I+GT E
Sbjct: 392 PGQPLTQQIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQENSNERLVTITGTQEC 451
Query: 610 KRAAENLI 617
+ A ++
Sbjct: 452 NQMALYML 459
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 81/381 (21%), Positives = 152/381 (39%), Gaps = 78/381 (20%)
Query: 27 EKDEKGNEESVIY-RILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVT 85
E+ +E S I+ R + +VIGK G+ ++ IR+ + A+ V D GA +R++T
Sbjct: 101 EQQRPQDESSWIHIRAVISSQEAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILT 160
Query: 86 IYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEE--CQ 143
+ QDA+ K I + N + + + +
Sbjct: 161 V----------------------SGPQDAVAKAFGLIIRTLNNEPLDAPSTAQSKTYPLR 198
Query: 144 ILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSC-AMEFDNFVLISGESE 202
+L+P +IIGK G+ I+ ++ + + +AS+ SC + + ++I G ++
Sbjct: 199 LLIPHLLIGSIIGKGGSRIREIQEASGARL-----NASD---SCLPLSSERSLVILGVAD 250
Query: 203 AVKKALFAIS-AIMYKFSPREDIPLETTVREAPPSI---------IIPSDVPIYPPGGLY 252
+V A + ++ ++ + + R P + ++P VP P GG Y
Sbjct: 251 SVHIATYYVAVTLVEQLTERFGGPAASAYATRSGGPAGAVPGGMQVVPY-VP-QPAGGQY 308
Query: 253 PNADPILPSRSVP--SILGAARVPDLQGY-----------------------------AD 281
+ + P + GA VP L G A
Sbjct: 309 GHPEHFKRHHHHPNRAAAGAYGVPYLHGQPAPAPVAQPALHYGAAPHAPYAGAGPHQPAP 368
Query: 282 TGNTWPVYSTGLSLVSGLVGASQ-SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQ 340
G P + G + VG + L ++ P + +G +IGKGG I IR SG+
Sbjct: 369 YGAPQPAQARGAPTPATPVGGVMPGQPLTQQIYIPNDMVGAIIGKGGAKINEIRHLSGSV 428
Query: 341 IDVDDTKDNRDECVITVTAIE 361
I +++ ++N +E ++T+T +
Sbjct: 429 IKINEPQENSNERLVTITGTQ 449
>gi|395839829|ref|XP_003792778.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 3 [Otolemur garnettii]
Length = 575
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 152/331 (45%), Gaps = 51/331 (15%)
Query: 297 SGLVGASQSEEL--VIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECV 354
G G+SQ+ ++ +R+L P +G +IGK G TIK+I + + +++D+ K+N
Sbjct: 179 QGHGGSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIH-RKENSGAAE 237
Query: 355 ITVTAIESPDDIKSMAVEAVLLLQTKINDEDD--DTVTIRLLVSSKVIGCIIGKSGSIIN 412
VT +P+ S A +L + K DE + + +++L + ++G +IGK G +
Sbjct: 238 KPVTIHATPEGT-SEACRMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLK 296
Query: 413 EIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRD----DALK-D 467
+I T + IS + + + V G V + +A ++I+ +LR+ D L +
Sbjct: 297 KIEHETGTKITISSLQDLSIYNP-ERTITVKGTVEACANAEIEIMKKLREAFENDMLAVN 355
Query: 468 RDGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYG 527
+ + P + + TG+S+ P PP GP G A
Sbjct: 356 QQANLIPGLNLSALGIFSTGLSVLP-----PPSGPRGAPPAA------------------ 392
Query: 528 SLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATI 587
PY + Y P + + +P AVG +IGK G+++ + + +GA+I
Sbjct: 393 -------PYHPFAQY--------PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASI 437
Query: 588 EMSDSKS-SRGDRVALISGTPEQKRAAENLI 617
+++ ++ +R+ +I+G PE + A+ I
Sbjct: 438 KIAPAEGPDVSERMVIITGPPEAQFKAQGRI 468
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 90/374 (24%), Positives = 156/374 (41%), Gaps = 75/374 (20%)
Query: 142 CQILVPSSQSANIIGKAGATIKRLRSKTRT-----------------SIKVTPKDASEPT 184
+ILVP+ IIGK G TIK + +T++ +I TP+ SE
Sbjct: 194 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTSE-- 251
Query: 185 HSCAMEFDNFVLISGESEAVKKA------LFAISAIMYKFSPREDIPLETTVREAPPSII 238
+C M + ++ E++ K A + A + ++ + +E L+ E I
Sbjct: 252 -ACRMILE---IMQKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKIT 307
Query: 239 IPS--DVPIYPP-------GGLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTWP-- 287
I S D+ IY P G + A+ + + L A D+ N P
Sbjct: 308 ISSLQDLSIYNPERTITVKGTVEACANAEI---EIMKKLREAFENDMLAVNQQANLIPGL 364
Query: 288 ------VYSTGLSLV---SGLVGA----------SQSEELVIRVLCPFNKIGRVIGKGGG 328
++STGLS++ SG GA E+ ++ + P +G +IGK G
Sbjct: 365 NLSALGIFSTGLSVLPPPSGPRGAPPAAPYHPFAQYPEQEIVNLFIPTQAVGAIIGKKGA 424
Query: 329 TIKSIRQASGAQIDVDDTK--DNRDECVITVTAIESPDDIKSMA---VEAVLLLQTKIND 383
IK + + +GA I + + D + VI I P + + A + L + N
Sbjct: 425 HIKQLARFAGASIKIAPAEGPDVSERMVI----ITGPPEAQFKAQGRIFGKLKEENFFNP 480
Query: 384 EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDE-LVEV 442
+++ + + V S G +IGK G +NE++ T A+V + + P D N+E +V +
Sbjct: 481 KEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEVIVPRDQTP---DENEEVIVRI 537
Query: 443 VGEVGSVRDALVQI 456
+G + + A +I
Sbjct: 538 IGHFFASQTAQRKI 551
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 89/404 (22%), Positives = 162/404 (40%), Gaps = 95/404 (23%)
Query: 9 RSQRDNDRDGKNQKRRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRA 68
S R+ G +Q R+I+ RIL P +G++IGK G I +I ++T++
Sbjct: 174 HSSREQGHGGSSQARQID----------FPLRILVPTQFVGAIIGKEGLTIKNITKQTQS 223
Query: 69 RVKVV-DPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVA 127
RV + GA ++ VTI++ E A +L++ A
Sbjct: 224 RVDIHRKENSGAAEKPVTIHA---------------TPEGTSEACRMILEIMQKEA---- 264
Query: 128 NATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTP-KDAS--EPT 184
++ K E+ +IL + +IGK G +K++ +T T I ++ +D S P
Sbjct: 265 ----DETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPE 320
Query: 185 HSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPRED-------------------IP 225
+ ++ + E E +KK A M + + + +P
Sbjct: 321 RTITVKGTVEACANAEIEIMKKLREAFENDMLAVNQQANLIPGLNLSALGIFSTGLSVLP 380
Query: 226 LETTVREAPPSIIIPSDVPIYPPGGLYPNADPI---LPSRSVPSILG--AARVPDLQGYA 280
+ R APP+ P Y P YP + + +P+++V +I+G A + L +A
Sbjct: 381 PPSGPRGAPPA------AP-YHPFAQYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFA 433
Query: 281 DTG-----NTWPVYSTGLSLVSG-----------LVGASQSE---------ELVIRVLCP 315
P S + +++G + G + E +L + P
Sbjct: 434 GASIKIAPAEGPDVSERMVIITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVP 493
Query: 316 FNKIGRVIGKGGGTIKSIRQASGAQIDV--DDTKDNRDECVITV 357
+ GRVIGKGG T+ ++ + A++ V D T D +E ++ +
Sbjct: 494 SSTAGRVIGKGGKTVNELQNLTSAEVIVPRDQTPDENEEVIVRI 537
>gi|403286483|ref|XP_003934516.1| PREDICTED: poly(rC)-binding protein 1-like isoform 1 [Saimiri
boliviensis boliviensis]
gi|403286485|ref|XP_003934517.1| PREDICTED: poly(rC)-binding protein 1-like isoform 2 [Saimiri
boliviensis boliviensis]
Length = 376
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 157/350 (44%), Gaps = 48/350 (13%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
L IR+L ++G +IGK ++K IR+ SGA+ + + N E +IT+T + K
Sbjct: 14 LTIRLLMHGKEVGSIIGKNEESVKRIREESGARFSISE--GNCPERIITLTG-PTCAIFK 70
Query: 368 SMAVEAVLLLQTKINDEDDDT-------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTKA 420
+ A+ + L+ IN ++ VT+RL+V + G +IGK G I EIR+ T A
Sbjct: 71 AFAM-MINKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGA 129
Query: 421 DVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNP----PV 476
V++S P ++ ++ + V SV + + QI L + + + G P P+
Sbjct: 130 QVQVSGDMLP---NSTEQAITVAVVPQSVTECVQQICLVMLETLPQCPQGRVMPIPYQPM 186
Query: 477 GADHIYSSGTG----------------ISMPPL-------LPSIPPVGPLGYDQRADSGS 513
A + G + +PPL +I P+ +Q A S
Sbjct: 187 PASSPVTCAGGQDRGSDAAGYPHATRDLGVPPLDACSTQGQHTISPLHLAKLNQVARQQS 246
Query: 514 GIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAG 573
I ML + G+ + +S + Y + L T E+ +P N +G +IG+ G
Sbjct: 247 HIAMLHGGT--GFAGI---ESSSPEVKGYRASLDASTQ--TTHELTIPNNLIGCIIGRQG 299
Query: 574 SNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFIMA 623
N+ IR++SGA I++++ R I+G+ A+ LI A + +
Sbjct: 300 VNINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLINARLFS 349
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 90/416 (21%), Positives = 162/416 (38%), Gaps = 90/416 (21%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH 89
E G ++ R+L +GS+IGK+ + + IR+E+ AR + + +R++T+
Sbjct: 7 ESGLNVTLTIRLLMHGKEVGSIIGKNEESVKRIREESGARFSISEG--NCPERIITLTG- 63
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAV-----ANATDNDKKRKEKEECQI 144
P CA + K A + N + ++ T++ + ++
Sbjct: 64 -----------------PTCA----IFKAFAMMINKLEEDINSSMTNSTAASRPPVTLRL 102
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAV 204
+VP++Q ++IGK G IK +R T ++V+ T + + ++ ++V
Sbjct: 103 VVPATQCGSLIGKGGCKIKEIRESTGAQVQVSGDMLPNST-------EQAITVAVVPQSV 155
Query: 205 KKALFAISAIMYKFSPREDIPLETTVREAP-PSIIIPSDVPIYPPGGL--------YPNA 255
+ + I +M E +P R P P +P+ P+ GG YP+A
Sbjct: 156 TECVQQICLVML-----ETLPQCPQGRVMPIPYQPMPASSPVTCAGGQDRGSDAAGYPHA 210
Query: 256 --DPILPSRSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGAS---------- 303
D +P S G + L + N + ++++ G G +
Sbjct: 211 TRDLGVPPLDACSTQGQHTISPL--HLAKLNQVARQQSHIAMLHGGTGFAGIESSSPEVK 268
Query: 304 -------QSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVIT 356
S + + P N IG +IG+ G I IRQ SGAQI + + + +T
Sbjct: 269 GYRASLDASTQTTHELTIPNNLIGCIIGRQGVNINEIRQMSGAQIKIANPVEGSSGRQVT 328
Query: 357 VTAIESPDDIKSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIIN 412
+T + ++ L Q IN L S K +GC GS+ N
Sbjct: 329 ITG----------SAASISLAQYLINAR---------LFSEKGMGCSYNNVGSLHN 365
Score = 46.6 bits (109), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+TIRLL+ K +G IIGK+ + IR+ + A IS+G+ P + ++ + G
Sbjct: 13 TLTIRLLMHGKEVGSIIGKNEESVKRIREESGARFSISEGNCP------ERIITLTGPTC 66
Query: 448 SVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
++ A +I +L +D ++ + + PPV
Sbjct: 67 AIFKAFAMMINKLEEDINSSMTNSTAASRPPV 98
>gi|386764191|ref|NP_001245616.1| IGF-II mRNA-binding protein, isoform L [Drosophila melanogaster]
gi|383293324|gb|AFH07330.1| IGF-II mRNA-binding protein, isoform L [Drosophila melanogaster]
Length = 638
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 157/341 (46%), Gaps = 58/341 (17%)
Query: 298 GLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITV 357
G+ G + + +R+L +G +IG+ G TI++I Q S A++DV K+N ++
Sbjct: 133 GMPGPGRQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHR-KENVGSLEKSI 191
Query: 358 TAIESPDD--------IKSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGS 409
T +P++ ++ M EA+ + +++ E + + +++L + +IG IIGKSG+
Sbjct: 192 TIYGNPENCTNACKRILEVMQQEAISTNKGELSPECSE-ICLKILAHNNLIGRIIGKSGN 250
Query: 410 IINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRD 469
I I + T + +S + + + ++ V G + ++ A QI +LR D
Sbjct: 251 TIKRIMQDTDTKITVSSINDINSFNL-ERIITVKGLIENMSRAENQISTKLRQSYENDLQ 309
Query: 470 GSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSL 529
+M P P + P+ S G GM+ ++S+
Sbjct: 310 -------------------AMAPQSLMFPGLHPMAMM----STPGNGMVFNTSM------ 340
Query: 530 SMGDSPYGSMSSYS-SKLYGGLPPPL-------TLEVLVPANAVGKVIGKAGSNLANIRK 581
P+ S S++ SK + PP+ T + +P NAVG +IG GS++ +I +
Sbjct: 341 -----PFPSCQSFAMSKTPASVVPPVFPNDLQETTYLYIPNNAVGAIIGTRGSHIRSIMR 395
Query: 582 ISGATIEMSDSKS-----SRGDRVALISGTPEQKRAAENLI 617
S A+++++ + + +R I GTPE + A+ +I
Sbjct: 396 FSNASLKIAPLDADKPLDQQTERKVTIVGTPEGQWKAQYMI 436
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 104/455 (22%), Positives = 198/455 (43%), Gaps = 68/455 (14%)
Query: 12 RDNDRDGKNQKRRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVK 71
++ R +NQ+ G + RIL ++G++IG+ G I +I Q++RARV
Sbjct: 118 KNQRRSQRNQRNPYPGMPGPGRQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVD 177
Query: 72 VV-DPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANAT 130
V G+ ++ +TIY + ++ C +A ++ + +
Sbjct: 178 VHRKENVGSLEKSITIYGNPEN----------------CT--NACKRILEVMQQEAISTN 219
Query: 131 DNDKKRKEKEEC-QILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAM 189
+ + E C +IL ++ IIGK+G TIKR+ T T I V+ + +
Sbjct: 220 KGELSPECSEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITVSSINDIN-----SF 274
Query: 190 EFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPG 249
+ + + G E + +A IS + + S D+ AP S++ P ++P
Sbjct: 275 NLERIITVKGLIENMSRAENQISTKLRQ-SYENDLQA-----MAPQSLMFPG---LHPMA 325
Query: 250 GLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELV 309
+ + ++ + S+P P Q +A + T S+V + E
Sbjct: 326 MMSTPGNGMVFNTSMP-------FPSCQSFA-------MSKTPASVVPPVFPNDLQETTY 371
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQ-----IDVDDTKDNRDECVITVTAIESPD 364
+ + P N +G +IG G I+SI + S A +D D D + E +T+ + +P+
Sbjct: 372 LYI--PNNAVGAIIGTRGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTI--VGTPE 427
Query: 365 DIKSMAVEAVLLLQTKINDE------DDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRT 418
+A ++ K+ +E DD +T+ LLV+S +G IIGK G + E+++ T
Sbjct: 428 G----QWKAQYMIFEKMREEGFMCGTDDVRLTVELLVASSQVGRIIGKGGQNVRELQRVT 483
Query: 419 KADVRISKGDKPKCADANDEL-VEVVGEVGSVRDA 452
+ +++ + + ++E V ++G SV+ A
Sbjct: 484 GSVIKLPEHALAPPSGGDEETPVHIIGLFYSVQSA 518
Score = 38.9 bits (89), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 30/38 (78%)
Query: 554 LTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSD 591
LT+E+LV ++ VG++IGK G N+ +++++G+ I++ +
Sbjct: 454 LTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIKLPE 491
>gi|412992928|emb|CCO16461.1| predicted protein [Bathycoccus prasinos]
Length = 703
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 107/204 (52%), Gaps = 29/204 (14%)
Query: 301 GASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNR-DECVITVTA 359
GA+++ L+ R+LCP + G VIGK G +K +++ SGA+I V+ D+ E VI + A
Sbjct: 260 GATRT--LLYRLLCPNARAGSVIGKNGEKVKQLQRDSGAKIKVEPPVDSTIAERVIAIEA 317
Query: 360 -------IESPDDIKSMAVEAVLLLQTKIN------DEDDDTVTIRLLVSSKVIGCIIGK 406
+ +P I + + ++L + N +E++ + IRLL+ S I +IG+
Sbjct: 318 QDVDDPTVWAPSQIALLRIVETIVLDAERNTTIGAAEENNGHIVIRLLLPSSQIRNVIGR 377
Query: 407 SGSIINEIRKRTKADVRI-SKGDKPKCADANDELVEVVGE-VGSVRDALVQIILRLRDDA 464
G++I IR + + VR+ + P+CA NDE++++ E + +V AL I +LR D
Sbjct: 378 FGNVIERIRVGSGSHVRVLPSSETPRCAKRNDEVLQISAESMENVASALAMITTQLRLD- 436
Query: 465 LKDRDGSRNPPVGADHIYSSGTGI 488
PPV A H GT +
Sbjct: 437 ---------PPVRA-HELPGGTKV 450
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 98/188 (52%), Gaps = 18/188 (9%)
Query: 29 DEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGA-KDRVVTIY 87
+ G +++YR+LCP+ GSVIGK+G+ + +++++ A++KV P +RV+ I
Sbjct: 257 ENHGATRTLLYRLLCPNARAGSVIGKNGEKVKQLQRDSGAKIKVEPPVDSTIAERVIAI- 315
Query: 88 SHVKDKEDVEVDDEFNDKEPLCAAQDALLK-VHAAIANAVANATDNDKKRKEKE-ECQIL 145
+ +DV +D +Q ALL+ V + +A N T + ++L
Sbjct: 316 ----EAQDV------DDPTVWAPSQIALLRIVETIVLDAERNTTIGAAEENNGHIVIRLL 365
Query: 146 VPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGES-EAV 204
+PSSQ N+IG+ G I+R+R + + ++V P S T CA D + IS ES E V
Sbjct: 366 LPSSQIRNVIGRFGNVIERIRVGSGSHVRVLP---SSETPRCAKRNDEVLQISAESMENV 422
Query: 205 KKALFAIS 212
AL I+
Sbjct: 423 ASALAMIT 430
>gi|281360685|ref|NP_001162717.1| IGF-II mRNA-binding protein, isoform J [Drosophila melanogaster]
gi|272506050|gb|ACZ95252.1| IGF-II mRNA-binding protein, isoform J [Drosophila melanogaster]
gi|383873394|gb|AFH55503.1| FI20063p1 [Drosophila melanogaster]
Length = 580
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 157/341 (46%), Gaps = 58/341 (17%)
Query: 298 GLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITV 357
G+ G + + +R+L +G +IG+ G TI++I Q S A++DV K+N ++
Sbjct: 75 GMPGPGRQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHR-KENVGSLEKSI 133
Query: 358 TAIESPDD--------IKSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGS 409
T +P++ ++ M EA+ + +++ E + + +++L + +IG IIGKSG+
Sbjct: 134 TIYGNPENCTNACKRILEVMQQEAISTNKGELSPECSE-ICLKILAHNNLIGRIIGKSGN 192
Query: 410 IINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRD 469
I I + T + +S + + + ++ V G + ++ A QI +LR D
Sbjct: 193 TIKRIMQDTDTKITVSSINDINSFNL-ERIITVKGLIENMSRAENQISTKLRQSYENDLQ 251
Query: 470 GSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSL 529
+M P P + P+ S G GM+ ++S+
Sbjct: 252 -------------------AMAPQSLMFPGLHPMAMM----STPGNGMVFNTSM------ 282
Query: 530 SMGDSPYGSMSSYS-SKLYGGLPPPL-------TLEVLVPANAVGKVIGKAGSNLANIRK 581
P+ S S++ SK + PP+ T + +P NAVG +IG GS++ +I +
Sbjct: 283 -----PFPSCQSFAMSKTPASVVPPVFPNDLQETTYLYIPNNAVGAIIGTRGSHIRSIMR 337
Query: 582 ISGATIEMSDSKS-----SRGDRVALISGTPEQKRAAENLI 617
S A+++++ + + +R I GTPE + A+ +I
Sbjct: 338 FSNASLKIAPLDADKPLDQQTERKVTIVGTPEGQWKAQYMI 378
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 105/459 (22%), Positives = 200/459 (43%), Gaps = 68/459 (14%)
Query: 12 RDNDRDGKNQKRRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVK 71
++ R +NQ+ G + RIL ++G++IG+ G I +I Q++RARV
Sbjct: 60 KNQRRSQRNQRNPYPGMPGPGRQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVD 119
Query: 72 VV-DPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANAT 130
V G+ ++ +TIY + ++ C +A ++ + +
Sbjct: 120 VHRKENVGSLEKSITIYGNPEN----------------CT--NACKRILEVMQQEAISTN 161
Query: 131 DNDKKRKEKEEC-QILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAM 189
+ + E C +IL ++ IIGK+G TIKR+ T T I V+ + +
Sbjct: 162 KGELSPECSEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITVSSINDIN-----SF 216
Query: 190 EFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPG 249
+ + + G E + +A IS + + S D+ AP S++ P ++P
Sbjct: 217 NLERIITVKGLIENMSRAENQISTKLRQ-SYENDLQA-----MAPQSLMFPG---LHPMA 267
Query: 250 GLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELV 309
+ + ++ + S+P P Q +A + T S+V + E
Sbjct: 268 MMSTPGNGMVFNTSMP-------FPSCQSFA-------MSKTPASVVPPVFPNDLQETTY 313
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQ-----IDVDDTKDNRDECVITVTAIESPD 364
+ + P N +G +IG G I+SI + S A +D D D + E +T+ + +P+
Sbjct: 314 LYI--PNNAVGAIIGTRGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTI--VGTPE 369
Query: 365 DIKSMAVEAVLLLQTKINDE------DDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRT 418
+A ++ K+ +E DD +T+ LLV+S +G IIGK G + E+++ T
Sbjct: 370 G----QWKAQYMIFEKMREEGFMCGTDDVRLTVELLVASSQVGRIIGKGGQNVRELQRVT 425
Query: 419 KADVRISKGDKPKCADANDEL-VEVVGEVGSVRDALVQI 456
+ +++ + + ++E V ++G SV+ A +I
Sbjct: 426 GSVIKLPEHALAPPSGGDEETPVHIIGLFYSVQSAQRRI 464
Score = 38.9 bits (89), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 30/38 (78%)
Query: 554 LTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSD 591
LT+E+LV ++ VG++IGK G N+ +++++G+ I++ +
Sbjct: 396 LTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIKLPE 433
>gi|63115359|gb|AAY33858.1| KH domain-containing protein [Betula platyphylla]
Length = 166
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 63/85 (74%), Gaps = 2/85 (2%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRI-SKGDKPKCADANDELVEVVGEV 446
+ T RLLV + IGC+IGK G+I+ E+R+ TKA++RI SK + PK A +DE+V++ G++
Sbjct: 5 SFTTRLLVPTSRIGCLIGKGGAIVTEMRRLTKANIRILSKENLPKVASEDDEMVQISGDL 64
Query: 447 GSVRDALVQIILRLRDDALKDRDGS 471
+DAL+Q++ RLR + L DR+G+
Sbjct: 65 DVAKDALMQVVTRLRAN-LFDREGA 88
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 143 QILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESE 202
++LVP+S+ +IGK GA + +R T+ +I++ K E A E D V ISG+ +
Sbjct: 9 RLLVPTSRIGCLIGKGGAIVTEMRRLTKANIRILSK---ENLPKVASEDDEMVQISGDLD 65
Query: 203 AVKKALFAI 211
K AL +
Sbjct: 66 VAKDALMQV 74
>gi|340521021|gb|EGR51256.1| predicted protein [Trichoderma reesei QM6a]
Length = 475
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 162/359 (45%), Gaps = 62/359 (17%)
Query: 304 QSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESP 363
+S + IR + + +IGKGG + +IR+ S A+ V D + E ++TV+ I
Sbjct: 115 ESSWIHIRAVISSPEAATIIGKGGENVSNIRKMSNAKCTVSDYQKGAVERILTVSGI--- 171
Query: 364 DDIKSMAVEAVLLLQTKINDE--------DDDTVTIRLLVSSKVIGCIIGKSGSIINEIR 415
+ ++A L+++T +N+E T +RLL+ +IG IIGK GS I EI+
Sbjct: 172 --VDAVAKAFGLIIRT-LNNEPLTEASTASSKTYPLRLLIPHILIGSIIGKGGSRIREIQ 228
Query: 416 KRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPP 475
+ + A + S P ++ + LV V+G +V A + L + L +R G P
Sbjct: 229 EASGARLNASDSCLPMSSERS--LV-VMGVADAVHIATYYVGSTLLEQ-LNERFGG---P 281
Query: 476 VGADHIYSSGTGI-SMPPLLPSIP--PVGPLGYDQRADS--------------------- 511
+ + SG + S+P + +P P G+ RA++
Sbjct: 282 AASAYATRSGAPVGSIPGGMQVVPYSPQPASGHYGRAENYGRHQERRPHHMPPAPYPQPY 341
Query: 512 --GSGIGMLSSSSLYGYG--------------SLSMGDSPYGSMSSYSSKLYGGLPP-PL 554
G+ G + YG G ++ P + ++ G+P P+
Sbjct: 342 AHGAPHGTPAMPMQYGAGQPAAYGAAAPHVQPHMAPHTGPQAHGAPQGQPMHAGMPGGPI 401
Query: 555 TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAA 613
T ++ +P + VG +IGK G + IR++SG+ I++++ + + +R+ I+GT E R A
Sbjct: 402 TQQIYIPNDMVGAIIGKGGQKINEIRQMSGSVIKINEPQDNSNERLVTITGTEECNRMA 460
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 85/381 (22%), Positives = 161/381 (42%), Gaps = 87/381 (22%)
Query: 50 SVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLC 109
++IGK G+ +++IR+ + A+ V D GA +R++T+ V
Sbjct: 132 TIIGKGGENVSNIRKMSNAKCTVSDYQKGAVERILTVSGIV------------------- 172
Query: 110 AAQDALLKVHAAIANAVANA--TDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRS 167
DA+ K I + N T+ + ++L+P +IIGK G+ I+ ++
Sbjct: 173 ---DAVAKAFGLIIRTLNNEPLTEASTASSKTYPLRLLIPHILIGSIIGKGGSRIREIQE 229
Query: 168 KTRTSIKVTPKDASEPTHSC-AMEFDNFVLISGESEAVKKALFAI-SAIMYKFSPREDIP 225
+ + +AS+ SC M + +++ G ++AV A + + S ++ + + R P
Sbjct: 230 ASGARL-----NASD---SCLPMSSERSLVVMGVADAVHIATYYVGSTLLEQLNERFGGP 281
Query: 226 LET--TVREAPPSIIIPSDVPI-----YPPGGLY-------------------------- 252
+ R P IP + + P G Y
Sbjct: 282 AASAYATRSGAPVGSIPGGMQVVPYSPQPASGHYGRAENYGRHQERRPHHMPPAPYPQPY 341
Query: 253 ----PNADPILPSR---SVPSILGAARVPDLQGYA--DTGNTWPVYSTGLSLVSGLVGAS 303
P+ P +P + P+ GAA P +Q + TG G + +G+ G
Sbjct: 342 AHGAPHGTPAMPMQYGAGQPAAYGAA-APHVQPHMAPHTGPQAHGAPQGQPMHAGMPGGP 400
Query: 304 QSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESP 363
++++ I P + +G +IGKGG I IRQ SG+ I +++ +DN +E ++T+T E
Sbjct: 401 ITQQIYI----PNDMVGAIIGKGGQKINEIRQMSGSVIKINEPQDNSNERLVTITGTEEC 456
Query: 364 DDIKSMAVEAVLLLQTKINDE 384
+ + A+ +L +++ E
Sbjct: 457 NRM------ALYMLYSRLESE 471
Score = 42.4 bits (98), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 34/50 (68%)
Query: 37 VIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTI 86
+ +I P+ ++G++IGK G+ IN IRQ + + +K+ +P + +R+VTI
Sbjct: 401 ITQQIYIPNDMVGAIIGKGGQKINEIRQMSGSVIKINEPQDNSNERLVTI 450
>gi|119480179|ref|XP_001260118.1| KH domain RNA binding protein [Neosartorya fischeri NRRL 181]
gi|119408272|gb|EAW18221.1| KH domain RNA binding protein [Neosartorya fischeri NRRL 181]
Length = 464
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 96/368 (26%), Positives = 162/368 (44%), Gaps = 70/368 (19%)
Query: 304 QSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESP 363
+S + IR + + VIGKGG + IR+ SGA+ V D E ++TV+ P
Sbjct: 108 ESSWIHIRAVISSQEAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSG---P 164
Query: 364 DDIKSMAVEAVLLLQTKINDEDDD--------TVTIRLLVSSKVIGCIIGKSGSIINEIR 415
D + A L+++T +N+E D T +RLL+ +IG IIGK GS I EI+
Sbjct: 165 QDAVAKAFG--LIIRT-LNNEPLDAPSTAQSKTYPLRLLIPHLLIGSIIGKGGSRIREIQ 221
Query: 416 KRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPP 475
+ + A R++ D + LV ++G SV A + + L + L +R G P
Sbjct: 222 EASGA--RLNASDSCLPLSSERSLV-ILGVADSVHIATYYVAVTLVEQ-LTERFGG---P 274
Query: 476 VGADHIYSS-------GTGISMPPLLPSIPPVGPLGYDQ----------RADSGS-GIGM 517
+ + S G+ + P +P P G G+ + RA +G+ G+
Sbjct: 275 AASAYATRSGGPAGAVPGGMQVVPYVPQ-PAGGQYGHPEHFKRHHPHPNRAAAGAYGVPY 333
Query: 518 LS--------SSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPP----------------- 552
L + YG+ +PY + YG P
Sbjct: 334 LHGQPAPAPVAQPALHYGAAP--HAPYAGAGPHQPAPYGAPQPAQARGAPTPATPVGGVM 391
Query: 553 ---PLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQ 609
PLT ++ +P + VG +IGK G+ + IR +SG+ I++++ + + +R+ I+GT E
Sbjct: 392 PGQPLTQQIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQENSNERLVTITGTQEC 451
Query: 610 KRAAENLI 617
+ A ++
Sbjct: 452 NQMALYML 459
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 81/380 (21%), Positives = 152/380 (40%), Gaps = 76/380 (20%)
Query: 27 EKDEKGNEESVIY-RILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVT 85
E+ +E S I+ R + +VIGK G+ ++ IR+ + A+ V D GA +R++T
Sbjct: 101 EQQRPQDESSWIHIRAVISSQEAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILT 160
Query: 86 IYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEE--CQ 143
+ QDA+ K I + N + + + +
Sbjct: 161 V----------------------SGPQDAVAKAFGLIIRTLNNEPLDAPSTAQSKTYPLR 198
Query: 144 ILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSC-AMEFDNFVLISGESE 202
+L+P +IIGK G+ I+ ++ + + +AS+ SC + + ++I G ++
Sbjct: 199 LLIPHLLIGSIIGKGGSRIREIQEASGARL-----NASD---SCLPLSSERSLVILGVAD 250
Query: 203 AVKKALFAIS-AIMYKFSPREDIPLETTV--------REAPPSIIIPSDVPIYPPGGLYP 253
+V A + ++ ++ + + R P + P + + VP P GG Y
Sbjct: 251 SVHIATYYVAVTLVEQLTERFGGPAASAYATRSGGPAGAVPGGMQVVPYVP-QPAGGQYG 309
Query: 254 NADPILPSRSVP--SILGAARVPDLQGY-----------------------------ADT 282
+ + P + GA VP L G A
Sbjct: 310 HPEHFKRHHPHPNRAAAGAYGVPYLHGQPAPAPVAQPALHYGAAPHAPYAGAGPHQPAPY 369
Query: 283 GNTWPVYSTGLSLVSGLVGASQ-SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQI 341
G P + G + VG + L ++ P + +G +IGKGG I IR SG+ I
Sbjct: 370 GAPQPAQARGAPTPATPVGGVMPGQPLTQQIYIPNDMVGAIIGKGGAKINEIRHLSGSVI 429
Query: 342 DVDDTKDNRDECVITVTAIE 361
+++ ++N +E ++T+T +
Sbjct: 430 KINEPQENSNERLVTITGTQ 449
>gi|159129031|gb|EDP54145.1| KH domain RNA binding protein [Aspergillus fumigatus A1163]
Length = 464
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 96/368 (26%), Positives = 162/368 (44%), Gaps = 70/368 (19%)
Query: 304 QSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESP 363
+S + IR + + VIGKGG + IR+ SGA+ V D E ++TV+ P
Sbjct: 108 ESSWIHIRAVISSQEAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSG---P 164
Query: 364 DDIKSMAVEAVLLLQTKINDEDDD--------TVTIRLLVSSKVIGCIIGKSGSIINEIR 415
D + A L+++T +N+E D T +RLL+ +IG IIGK GS I EI+
Sbjct: 165 QDAVAKAFG--LIIRT-LNNEPLDAPSTAQSKTYPLRLLIPHLLIGSIIGKGGSRIREIQ 221
Query: 416 KRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPP 475
+ + A R++ D + LV ++G SV A + + L + L +R G P
Sbjct: 222 EASGA--RLNASDSCLPLSSERSLV-ILGVADSVHIATYYVAVTLVEQ-LTERFGG---P 274
Query: 476 VGADHIYSS-------GTGISMPPLLPSIPPVGPLGYDQ----------RADSGS-GIGM 517
+ + S G+ + P +P P G G+ + RA +G+ G+
Sbjct: 275 AASAYATRSGGPAGAVPGGMQVVPYVPQ-PAGGQYGHPEHFKRHHPHPNRAAAGAYGVPY 333
Query: 518 LS--------SSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPP----------------- 552
L + YG+ +PY + YG P
Sbjct: 334 LHGQPAPAPVAQPALHYGAAP--HAPYAGAGPHQPAPYGAPQPAQARGAPTPATPVGGVM 391
Query: 553 ---PLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQ 609
PLT ++ +P + VG +IGK G+ + IR +SG+ I++++ + + +R+ I+GT E
Sbjct: 392 PGQPLTQQIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQENSNERLVTITGTQEC 451
Query: 610 KRAAENLI 617
+ A ++
Sbjct: 452 NQMALYML 459
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 81/380 (21%), Positives = 152/380 (40%), Gaps = 76/380 (20%)
Query: 27 EKDEKGNEESVIY-RILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVT 85
E+ +E S I+ R + +VIGK G+ ++ IR+ + A+ V D GA +R++T
Sbjct: 101 EQQRPQDESSWIHIRAVISSQEAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILT 160
Query: 86 IYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEE--CQ 143
+ QDA+ K I + N + + + +
Sbjct: 161 V----------------------SGPQDAVAKAFGLIIRTLNNEPLDAPSTAQSKTYPLR 198
Query: 144 ILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSC-AMEFDNFVLISGESE 202
+L+P +IIGK G+ I+ ++ + + +AS+ SC + + ++I G ++
Sbjct: 199 LLIPHLLIGSIIGKGGSRIREIQEASGARL-----NASD---SCLPLSSERSLVILGVAD 250
Query: 203 AVKKALFAIS-AIMYKFSPREDIPLETTV--------REAPPSIIIPSDVPIYPPGGLYP 253
+V A + ++ ++ + + R P + P + + VP P GG Y
Sbjct: 251 SVHIATYYVAVTLVEQLTERFGGPAASAYATRSGGPAGAVPGGMQVVPYVP-QPAGGQYG 309
Query: 254 NADPILPSRSVP--SILGAARVPDLQGY-----------------------------ADT 282
+ + P + GA VP L G A
Sbjct: 310 HPEHFKRHHPHPNRAAAGAYGVPYLHGQPAPAPVAQPALHYGAAPHAPYAGAGPHQPAPY 369
Query: 283 GNTWPVYSTGLSLVSGLVGASQ-SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQI 341
G P + G + VG + L ++ P + +G +IGKGG I IR SG+ I
Sbjct: 370 GAPQPAQARGAPTPATPVGGVMPGQPLTQQIYIPNDMVGAIIGKGGAKINEIRHLSGSVI 429
Query: 342 DVDDTKDNRDECVITVTAIE 361
+++ ++N +E ++T+T +
Sbjct: 430 KINEPQENSNERLVTITGTQ 449
>gi|348582424|ref|XP_003476976.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Cavia porcellus]
Length = 532
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 153/333 (45%), Gaps = 41/333 (12%)
Query: 301 GASQSEE--LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
G+SQ+ + +R+L P +G +IGK G TIK+I + + +++D+ K+N VT
Sbjct: 118 GSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHR-KENSGAAEKPVT 176
Query: 359 AIESPDDIKSMAVEAVLLLQTKINDEDD--DTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
+P+ S A +L + K DE + + +++L + ++G +IGK G + +I
Sbjct: 177 IHATPEGT-SEACRMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEH 235
Query: 417 RTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPV 476
T + IS + + + V G V + A V+I+ +LR+ D +
Sbjct: 236 ETGTKITISSLQDLSIYNP-ERTITVKGAVEACASAEVEIMKKLREAFEND--------M 286
Query: 477 GADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPY 536
A H ++ L+P + + LG +G+ +L + + P+
Sbjct: 287 LAVHQQAN--------LIPGLN-LSALGI-----FSTGLSVLPPPAGPRGAPPTAPYHPF 332
Query: 537 GSMSSYSSKLY-----------GGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGA 585
+ S Y S LY P + + +P AVG +IGK G+++ + + +GA
Sbjct: 333 ATHSGYFSSLYPHHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGA 392
Query: 586 TIEMSDSKS-SRGDRVALISGTPEQKRAAENLI 617
+I+++ ++ +R+ +I+G PE + A+ I
Sbjct: 393 SIKIAPAEGPDVSERMVIITGPPEAQFKAQGRI 425
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 89/396 (22%), Positives = 155/396 (39%), Gaps = 97/396 (24%)
Query: 142 CQILVPSSQSANIIGKAGATIKRLRSKTRT-----------------SIKVTPKDASEPT 184
+ILVP+ IIGK G TIK + +T++ +I TP+ SE
Sbjct: 129 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTSE-- 186
Query: 185 HSCAMEFDNFVLISGESEAVKKA------LFAISAIMYKFSPREDIPLETTVREAPPSII 238
+C M + ++ E++ K A + A + ++ + +E L+ E I
Sbjct: 187 -ACRMILE---IMQKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKIT 242
Query: 239 IPS--DVPIYPP-------GGLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTWP-- 287
I S D+ IY P G + A + + L A D+ N P
Sbjct: 243 ISSLQDLSIYNPERTITVKGAVEACASAEV---EIMKKLREAFENDMLAVHQQANLIPGL 299
Query: 288 ------VYSTGLSLV---------------------SGLVGA--------------SQSE 306
++STGLS++ SG + S E
Sbjct: 300 NLSALGIFSTGLSVLPPPAGPRGAPPTAPYHPFATHSGYFSSLYPHHQFGPFPHHHSYPE 359
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTK--DNRDECVITVTAIESPD 364
+ ++ + P +G +IGK G IK + + +GA I + + D + VI I P
Sbjct: 360 QEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVI----ITGPP 415
Query: 365 DIKSMA---VEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKAD 421
+ + A + L + N +++ + + V S G +IGK G +NE++ T A+
Sbjct: 416 EAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAE 475
Query: 422 VRISKGDKPKCADANDE-LVEVVGEVGSVRDALVQI 456
V + + P D N+E +V ++G + + A +I
Sbjct: 476 VIVPRDQTP---DENEEVIVRIIGHFFASQTAQRKI 508
Score = 43.5 bits (101), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 10/97 (10%)
Query: 138 EKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLI 197
E+E + +P+ IIGK GA IK+L SIK+ P + + + + V+I
Sbjct: 359 EQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVS-------ERMVII 411
Query: 198 SGESEAVKKALFAISAIMYK---FSPREDIPLETTVR 231
+G EA KA I + + F+P+E++ LE +R
Sbjct: 412 TGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIR 448
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 58/148 (39%), Gaps = 24/148 (16%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPF-PGAKDRVVTIYSHVKDK 93
E I + P +G++IGK G I + + A +K+ P +R+V I
Sbjct: 359 EQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII------- 411
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
+A K I + + K + K E I VPSS +
Sbjct: 412 ---------------TGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGR 456
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+IGK G T+ L++ T + + P+D +
Sbjct: 457 VIGKGGKTVNELQNLTSAEV-IVPRDQT 483
>gi|257831439|gb|ACV71020.1| UPA21 [Capsicum annuum]
Length = 433
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 157/347 (45%), Gaps = 56/347 (16%)
Query: 309 VIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKS 368
V R++ P K+G +IG+ G +K + + +GA+I V + + ++ ++ E PD S
Sbjct: 55 VYRLVVPLVKVGSIIGRKGELVKKMCEQTGARIRVLEGPLGNADRIVLISGREDPDAQVS 114
Query: 369 MAVEAVLLLQTKIND-EDDD---------TVTIRLLVSSKVIGCIIGKSGSIINEIRKRT 418
A++AV + ++ E D + +LL++S +IG+ GS I EI++R+
Sbjct: 115 PAMDAVFRVFKRVAGLEGGDPGAAAAGFAFCSFKLLMASSQAVHLIGRHGSTIKEIQERS 174
Query: 419 KADVRI-SKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRD--------------- 462
A +R+ S+ D A A++ +VE+ GE V DA ++ +LR
Sbjct: 175 GASLRVLSEDDVVPYATADERIVEIRGEGLKVLDAFEAVVRQLRKFLVDHSMIPIFEKTC 234
Query: 463 ------DALKDRDGSRNPPVGA--DHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSG 514
++ ++ S N GA D+ +S + L + DS
Sbjct: 235 SQDRPLESWAEKSQSLNSEAGAVSDYSFSMNRDTYL------------LDCEAAMDS--- 279
Query: 515 IGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGS 574
L S+L YG D +G + + + ++ G + +T + VP +IG G+
Sbjct: 280 --KLPRSTLSLYGQ----DPGHGGIRTSAGRI-GPVVTQMTKVMQVPLLYAEDIIGIGGT 332
Query: 575 NLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFI 621
N+A IR+ S A + + +S+ + I G+ + + AE LIQ FI
Sbjct: 333 NIAYIRRTSKAVLTVQESRGLPEEITIEIKGSSSEVQTAEQLIQEFI 379
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 89/181 (49%), Gaps = 15/181 (8%)
Query: 38 IYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVE 97
+YR++ P +GS+IG+ G+++ + ++T AR++V++ G DR+V I +ED +
Sbjct: 55 VYRLVVPLVKVGSIIGRKGELVKKMCEQTGARIRVLEGPLGNADRIVLI----SGREDPD 110
Query: 98 VDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGK 157
+ A DA+ +V +A ++L+ SSQ+ ++IG+
Sbjct: 111 AQ--------VSPAMDAVFRVFKRVAGLEGGDPGAAAAGFAFCSFKLLMASSQAVHLIGR 162
Query: 158 AGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYK 217
G+TIK ++ ++ S++V +D P A + V I GE V A A+ + K
Sbjct: 163 HGSTIKEIQERSGASLRVLSEDDVVPY---ATADERIVEIRGEGLKVLDAFEAVVRQLRK 219
Query: 218 F 218
F
Sbjct: 220 F 220
>gi|18858571|ref|NP_571566.1| insulin-like growth factor 2 mRNA-binding protein 3 [Danio rerio]
gi|82248267|sp|Q9PW80.1|IF2B3_DANRE RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 3;
Short=IGF2 mRNA-binding protein 3; Short=IMP-3; AltName:
Full=Decapentaplegic and Vg-related 1 RNA-binding
protein; AltName: Full=IGF-II mRNA-binding protein 3;
AltName: Full=VICKZ family member 3; AltName: Full=Vg1
RNA-binding protein; Short=Vg1-RBP
gi|5596632|gb|AAD45610.1|AF161270_1 Vg1 RNA binding protein [Danio rerio]
gi|28278436|gb|AAH45873.1| Insulin-like growth factor 2 mRNA binding protein 3 [Danio rerio]
gi|182889884|gb|AAI65768.1| Igf2bp3 protein [Danio rerio]
Length = 582
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 147/318 (46%), Gaps = 51/318 (16%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSM 369
+R+L P +G +IGK G TI++I + + ++ID+ K+N +T +P+ S
Sbjct: 197 LRLLVPTQFVGAIIGKEGATIRNITKQTHSKIDIH-RKENAGAAEKPITVHSTPEGCSSA 255
Query: 370 AVEAVLLLQ-----TKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRI 424
+ ++Q TKI +E + +++L + +G +IGK G + +I + T + I
Sbjct: 256 CRNIMEIMQKEAIDTKITEE----IPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITI 311
Query: 425 SKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSS 484
S + + + V G + + A +I+ ++R+ D V A H+ S+
Sbjct: 312 SPLQDLTLYNP-ERTITVKGTLDACAKAEEEIMKKVRESYEND--------VAAMHLQSN 362
Query: 485 GTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSS 544
L+P + + + +G+ ++ G + P G+ + Y S
Sbjct: 363 --------LIPGL-------------NLNALGLFPGAASGGISPSVVSGPPPGAQAGYQS 401
Query: 545 KLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMS-----DSKSSRGDR 599
+G T+ + +PA AVG +IGK G ++ + + +GA+I+++ D+K R
Sbjct: 402 --FGAQMESETVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPADGIDAK----QR 455
Query: 600 VALISGTPEQKRAAENLI 617
+ +ISG PE + A+ I
Sbjct: 456 MVIISGPPEAQFKAQGRI 473
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 94/415 (22%), Positives = 165/415 (39%), Gaps = 81/415 (19%)
Query: 37 VIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKED 95
V R+L P +G++IGK G I +I ++T +++ + GA ++ +T++S
Sbjct: 195 VPLRLLVPTQFVGAIIGKEGATIRNITKQTHSKIDIHRKENAGAAEKPITVHS------- 247
Query: 96 VEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANII 155
E +A ++++ A D K E+ +IL ++ +I
Sbjct: 248 --------TPEGCSSACRNIMEIMQKEAI--------DTKITEEIPLKILAHNNFVGRLI 291
Query: 156 GKAGATIKRLRSKTRTSIKVTP-KDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAI 214
GK G +K++ T T I ++P +D + + + + G +A KA I
Sbjct: 292 GKEGRNLKKIEQDTDTKITISPLQDLT------LYNPERTITVKGTLDACAKAE---EEI 342
Query: 215 MYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSV----PSILGA 270
M K RE + S +IP GL NA + P + PS++
Sbjct: 343 MKKV--RESYENDVAAMHLQ-SNLIP---------GLNLNALGLFPGAASGGISPSVVSG 390
Query: 271 ARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTI 330
GY G +Q E + + P +G +IGK G I
Sbjct: 391 PPPGAQAGYQSFG-------------------AQMESETVHLFIPALAVGAIIGKQGQHI 431
Query: 331 KSIRQASGAQIDVD--DTKDNRDECVITVTAIESPDDIKSMA---VEAVLLLQTKINDED 385
K + + +GA I + D D + VI I P + + A + L + ++
Sbjct: 432 KQLSRFAGASIKIAPADGIDAKQRMVI----ISGPPEAQFKAQGRIFGKLKEENFFGPKE 487
Query: 386 DDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELV 440
+ + + V S G +IGK G +NE++ T A+V + + P D ND++V
Sbjct: 488 EVKLEAHIKVPSFAAGRVIGKGGKTVNELQNLTSAEVVVPRDQTP---DENDQVV 539
Score = 40.0 bits (92), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 59/149 (39%), Gaps = 26/149 (17%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPG--AKDRVVTIYSHVKD 92
ES + P +G++IGK G+ I + + A +K+ P G AK R+V I
Sbjct: 407 ESETVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKIA-PADGIDAKQRMVII------ 459
Query: 93 KEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSA 152
+A K I + K + K E I VPS +
Sbjct: 460 ----------------SGPPEAQFKAQGRIFGKLKEENFFGPKEEVKLEAHIKVPSFAAG 503
Query: 153 NIIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+IGK G T+ L++ T + V P+D +
Sbjct: 504 RVIGKGGKTVNELQNLTSAEV-VVPRDQT 531
>gi|417410186|gb|JAA51570.1| Putative polyc-binding alphacp-1, partial [Desmodus rotundus]
Length = 376
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 170/365 (46%), Gaps = 44/365 (12%)
Query: 291 TGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNR 350
T L++ +G++ + L IR+L ++G +IGK G ++K +R+ SGA+I++ + N
Sbjct: 9 TLLNMDTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNC 66
Query: 351 DECVITVTAIESPDDIKSMAVEAVL-LLQTKINDEDDDT-------VTIRLLVSSKVIGC 402
E +IT+ P + A ++ L+ I+ ++ VT+RL+V + G
Sbjct: 67 PERIITLAG---PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGS 123
Query: 403 IIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRD 462
+IGK G I EIR+ T A V+++ P ++ + + + G S+ + + QI + + +
Sbjct: 124 LIGKGGCKIKEIRESTGAQVQVAGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLE 180
Query: 463 D---------ALKDRDGSRNPPV---GADHIYSSGT-GISMPPLLPSI--------PPVG 501
+ R + PV G YS+G+ S P PS+ PP+
Sbjct: 181 TLSQSPPKGVTIPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLE 240
Query: 502 PLGYD-QRADSGSGIGMLSSSSLY-GYGSLSMGDSPYGSMSSYSSKLYGGLP-----PPL 554
Q A + L ++ + ++ G++ + + S S ++ G
Sbjct: 241 AYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWASLDASTQT 300
Query: 555 TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAE 614
T E+ +P N +G +IG+ G+N+ IR++SGA I++++ R I+G+ A+
Sbjct: 301 THELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQ 360
Query: 615 NLIQA 619
LI A
Sbjct: 361 YLINA 365
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 85/377 (22%), Positives = 152/377 (40%), Gaps = 93/377 (24%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH 89
E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R++T
Sbjct: 19 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIIT---- 72
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAV-----ANATDNDKKRKEKEECQI 144
L +A+ K A I + + ++ T++ + ++
Sbjct: 73 ------------------LAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRL 114
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAV 204
+VP+SQ ++IGK G IK +R T ++V T + + I+G +++
Sbjct: 115 VVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNST-------ERAITIAGIPQSI 167
Query: 205 KKALFAISAIMYKFSPREDIPLETTVREAPPSIIIP-----SDVPIYPPGGL-------- 251
+ + I +M LET + P + IP S P+ GG
Sbjct: 168 IECVKQICVVM----------LETLSQSPPKGVTIPYRPKPSSSPVIFAGGQDRYSTGSD 217
Query: 252 ---YPNADPIL--------PSRSVPSILGAARVPD-----LQGYADTGNTWPVY--STGL 293
+P+ P + P +I G +P L A + +P+ +TG
Sbjct: 218 SASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGF 277
Query: 294 SLV-----------SGLVGASQS-EELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQI 341
S + + L ++Q+ EL I P N IG +IG+ G I IRQ SGAQI
Sbjct: 278 SGIESSSPEVKGYWASLDASTQTTHELTI----PNNLIGCIIGRQGANINEIRQMSGAQI 333
Query: 342 DVDDTKDNRDECVITVT 358
+ + + +T+T
Sbjct: 334 KIANPVEGSSGRQVTIT 350
>gi|417398902|gb|JAA46484.1| Putative polyc-binding alphacp-1 [Desmodus rotundus]
Length = 320
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 156/333 (46%), Gaps = 36/333 (10%)
Query: 297 SGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVIT 356
+G++ + L IR+L ++G +IGK G ++K +R+ SGA+I++ + N E +IT
Sbjct: 3 TGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIIT 60
Query: 357 VTAIESPDDIKSMAVEAVL-LLQTKINDEDDDT-------VTIRLLVSSKVIGCIIGKSG 408
+ P + A ++ L+ I+ ++ VT+RL+V + G +IGK G
Sbjct: 61 LAG---PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGG 117
Query: 409 SIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDR 468
I EIR+ T A V+++ P ++ + + + G S+ + + QI + + +
Sbjct: 118 CKIKEIRESTGAQVQVAGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLETL---- 170
Query: 469 DGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGS 528
S++PP G Y PS PV + +A + G + L
Sbjct: 171 --SQSPPKGVTIPYRPK---------PSSSPV--IFAGGQAYTIQGQYAIPQPDLTKLHQ 217
Query: 529 LSMGDSPYGSMSSYSSKLYGGL--PPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGAT 586
L+M S + M+ ++ L T E+ +P N +G +IG+ G+N+ IR++SGA
Sbjct: 218 LAMQQSHF-PMTHGNTGFSASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQ 276
Query: 587 IEMSDSKSSRGDRVALISGTPEQKRAAENLIQA 619
I++++ R I+G+ A+ LI A
Sbjct: 277 IKIANPVEGSSGRQVTITGSAASISLAQYLINA 309
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 143/341 (41%), Gaps = 65/341 (19%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH 89
E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R++T
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIIT---- 60
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAV-----ANATDNDKKRKEKEECQI 144
L +A+ K A I + + ++ T++ + ++
Sbjct: 61 ------------------LAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRL 102
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAV 204
+VP+SQ ++IGK G IK +R T ++V T + + I+G +++
Sbjct: 103 VVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNST-------ERAITIAGIPQSI 155
Query: 205 KKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADP-ILPSRS 263
+ + I +M LET + P + IP Y P P++ P I
Sbjct: 156 IECVKQICVVM----------LETLSQSPPKGVTIP-----YRP---KPSSSPVIFAGGQ 197
Query: 264 VPSILGAARVPD-----LQGYADTGNTWPVYSTGLSLVSGLVGASQS-EELVIRVLCPFN 317
+I G +P L A + +P+ + L ++Q+ EL I P N
Sbjct: 198 AYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSASLDASTQTTHELTI----PNN 253
Query: 318 KIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
IG +IG+ G I IRQ SGAQI + + + +T+T
Sbjct: 254 LIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTIT 294
>gi|311252459|ref|XP_003125105.1| PREDICTED: poly(rC)-binding protein 1-like [Sus scrofa]
Length = 356
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 159/355 (44%), Gaps = 66/355 (18%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
L IR+L ++G +IGK G ++K IR+ SGA+I++ + N E +IT+T P +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIITLTG---PTNAI 68
Query: 368 SMAVEAVL-LLQTKINDEDDDT-------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
A ++ L+ IN ++ VT+RL+V + G +IGK G I EIR+ T
Sbjct: 69 FKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTG 128
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGAD 479
A V+++ P ++ + + + G SV + + QI L + + S++P
Sbjct: 129 AQVQVAGDMLP---NSTERAITIAGVPQSVTECVKQICLVMLETL------SQSP----- 174
Query: 480 HIYSSGTGISMPPL-LPSIPPVGPLGYDQRADSGSGIGM---------LSSSSLYGYGSL 529
G +++P +P+ PV G R +G L + S+ G ++
Sbjct: 175 ----QGRVMTIPYQPMPASSPVICAGGQDRCSDAAGYPHATHDLEGTPLDAYSIQGQHTI 230
Query: 530 SMGD----SPYGSMSSYSSKLYGGL---------------------PPPLTLEVLVPANA 564
S D + S+ + ++GG T E+ +P N
Sbjct: 231 SPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNL 290
Query: 565 VGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQA 619
+G +IG+ G+N+ IR++SGA I++++ R I+G+ A+ LI A
Sbjct: 291 IGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLINA 345
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 80/363 (22%), Positives = 145/363 (39%), Gaps = 73/363 (20%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH 89
E G ++ R+L +GS+IGK G+ + IR+E+ AR+ + + +R++T
Sbjct: 7 ESGLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIIT---- 60
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAV-----ANATDNDKKRKEKEECQI 144
L +A+ K A I + + ++ T++ + ++
Sbjct: 61 ------------------LTGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRL 102
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAV 204
+VP++Q ++IGK G IK +R T ++V T + + I+G ++V
Sbjct: 103 VVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNST-------ERAITIAGVPQSV 155
Query: 205 KKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGL--------YPNAD 256
+ + I +M + + T+ P +P+ P+ GG YP+A
Sbjct: 156 TECVKQICLVMLETLSQSPQGRVMTIPYQP----MPASSPVICAGGQDRCSDAAGYPHAT 211
Query: 257 PILPSRSVP--SILGAARV-----PDLQGYADTGNTWPVYSTGLSLV------------- 296
L + SI G + L A + + + G
Sbjct: 212 HDLEGTPLDAYSIQGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYW 271
Query: 297 SGLVGASQ-SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVI 355
+ L ++Q + EL I P N IG +IG+ G I IRQ SGAQI + + + +
Sbjct: 272 ASLDASTQTTHELTI----PNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQV 327
Query: 356 TVT 358
T+T
Sbjct: 328 TIT 330
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 9/92 (9%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+TIRLL+ K +G IIGK G + IR+ + A + IS+G+ P + ++ + G
Sbjct: 13 TLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCP------ERIITLTGPTN 66
Query: 448 SVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
++ A II +L +D ++ + + PPV
Sbjct: 67 AIFKAFAMIIDKLEEDINSSMTNSTAASRPPV 98
>gi|301786262|ref|XP_002928556.1| PREDICTED: RNA-binding protein Nova-2-like [Ailuropoda melanoleuca]
Length = 329
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 147/333 (44%), Gaps = 76/333 (22%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD-----NRDECVITVTAIE 361
E ++VL P G +IGKGG TI +++ +GA I + +KD C++ TA E
Sbjct: 32 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTA-E 90
Query: 362 SPDDIKSMAVEAVL-------------LLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSG 408
+ + + S E V +LQ + D +L+V + G IIGK G
Sbjct: 91 ALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGG 150
Query: 409 SIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDR 468
+ + + +++ A V++S+ KP+ + + +V V GE V A+ I+ ++++D
Sbjct: 151 ATVKAVMEQSGAWVQLSQ--KPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQED----- 203
Query: 469 DGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGS 528
P + + S ++ P +++S+ G
Sbjct: 204 ------PQSSSCLNISYANVAGP--------------------------VANSNPTG--- 228
Query: 529 LSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIE 588
SPY S + +++ L +E+ VP N VG ++GK G L ++++GA I+
Sbjct: 229 -----SPYASPADLAAESAKEL-----VEIAVPENLVGAILGKGGKTLVEYQELTGARIQ 278
Query: 589 MSDS----KSSRGDRVALISGTPEQKRAAENLI 617
+S +R RV I+G+P +AA+ LI
Sbjct: 279 ISKKGEFLPGTRNRRVT-ITGSPAATQAAQYLI 310
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 142/323 (43%), Gaps = 68/323 (21%)
Query: 26 NEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV---DPFPGAKDR 82
++ G E ++L P GS+IGK G+ I +++ET A +K+ D +PG +R
Sbjct: 22 TKRSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTER 81
Query: 83 VVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEEC 142
V + E + F E + A+ K + N + T + R ++
Sbjct: 82 VCLVQG---TAEALNAVHSF-IAEKVREIPQAMTKPE--VVNILQPQTTMNPDR--AKQA 133
Query: 143 QILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESE 202
+++VP+S + IIGK GAT+K + ++ ++++ K ++ + V +SGE E
Sbjct: 134 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKP-----EGINLQ-ERVVTVSGEPE 187
Query: 203 AVKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPN-ADPILPS 261
V K A+SAI+ K V+E P S S + I Y N A P+
Sbjct: 188 QVHK---AVSAIVQK------------VQEDPQS---SSCLNIS-----YANVAGPV--- 221
Query: 262 RSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGR 321
A++ T Y++ L A++S + ++ + P N +G
Sbjct: 222 ------------------ANSNPTGSPYASPADL------AAESAKELVEIAVPENLVGA 257
Query: 322 VIGKGGGTIKSIRQASGAQIDVD 344
++GKGG T+ ++ +GA+I +
Sbjct: 258 ILGKGGKTLVEYQELTGARIQIS 280
>gi|402860705|ref|XP_003894763.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 4 [Papio anubis]
Length = 542
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 145/333 (43%), Gaps = 41/333 (12%)
Query: 301 GASQSEE--LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
G SQ+ + +R+L P +G +IGK G TIK+I + + +++D+ K+N VT
Sbjct: 128 GTSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHR-KENSGAAEKPVT 186
Query: 359 AIESPDDIKSMAVEAVLLLQTKINDEDD--DTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
+P+ S A +L + K DE + + +++L + ++G +IGK G + +I
Sbjct: 187 IHATPEGT-SEACRMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEH 245
Query: 417 RTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPV 476
T + IS + + + V G V + A ++I+ +LR+ D
Sbjct: 246 ETGTKITISSLQDLSIYNP-ERTITVKGTVEACASAEIEIMKKLREAFENDMLAVNQ--- 301
Query: 477 GADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPY 536
L+P L +G+ +LS + + P+
Sbjct: 302 -------------QANLIPG------LNLSALGIFSTGLSVLSPPAGPRGAPPAAPYHPF 342
Query: 537 GSMSSYSSKLY-----------GGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGA 585
+ S Y S LY P + + +P AVG +IGK G+++ + + +GA
Sbjct: 343 ATHSGYFSSLYPHHQFGPFPHHHSYPEQEVVNLFIPTQAVGAIIGKKGAHIKQLARFAGA 402
Query: 586 TIEMSDSKS-SRGDRVALISGTPEQKRAAENLI 617
+I+++ ++ +R+ +I+G PE + A+ I
Sbjct: 403 SIKIAPAEGPDVSERMVIITGPPEAQFKAQGRI 435
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 89/393 (22%), Positives = 153/393 (38%), Gaps = 91/393 (23%)
Query: 142 CQILVPSSQSANIIGKAGATIKRLRSKTRT-----------------SIKVTPKDASEPT 184
+ILVP+ IIGK G TIK + +T++ +I TP+ SE
Sbjct: 139 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTSE-- 196
Query: 185 HSCAMEFDNFVLISGESEAVKKA------LFAISAIMYKFSPREDIPLETTVREAPPSII 238
+C M + ++ E++ K A + A + ++ + +E L+ E I
Sbjct: 197 -ACRMILE---IMQKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKIT 252
Query: 239 IPS--DVPIYPPGGLYPNADPILPSRS----VPSILGAARVPDLQGYADTGNTWP----- 287
I S D+ IY P + S + L A D+ N P
Sbjct: 253 ISSLQDLSIYNPERTITVKGTVEACASAEIEIMKKLREAFENDMLAVNQQANLIPGLNLS 312
Query: 288 ---VYSTGLSLVS---------------------GLVGA--------------SQSEELV 309
++STGLS++S G + S E+ V
Sbjct: 313 ALGIFSTGLSVLSPPAGPRGAPPAAPYHPFATHSGYFSSLYPHHQFGPFPHHHSYPEQEV 372
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTK--DNRDECVITVTAIESPDDIK 367
+ + P +G +IGK G IK + + +GA I + + D + VI I P + +
Sbjct: 373 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVI----ITGPPEAQ 428
Query: 368 SMA---VEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRI 424
A + L + N +++ + + V S G +IGK G +NE++ T A+V +
Sbjct: 429 FKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEVIV 488
Query: 425 SKGDKPKCADANDE-LVEVVGEVGSVRDALVQI 456
+ P D N+E +V ++G + + A +I
Sbjct: 489 PRDQTP---DENEEVIVRIIGHFFASQTAQRKI 518
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 10/97 (10%)
Query: 138 EKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLI 197
E+E + +P+ IIGK GA IK+L SIK+ P + + + + V+I
Sbjct: 369 EQEVVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVS-------ERMVII 421
Query: 198 SGESEAVKKALFAISAIMYK---FSPREDIPLETTVR 231
+G EA KA I + + F+P+E++ LE +R
Sbjct: 422 TGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIR 458
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 58/148 (39%), Gaps = 24/148 (16%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPF-PGAKDRVVTIYSHVKDK 93
E + + P +G++IGK G I + + A +K+ P +R+V I
Sbjct: 369 EQEVVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII------- 421
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
+A K I + + K + K E I VPSS +
Sbjct: 422 ---------------TGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGR 466
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+IGK G T+ L++ T + + P+D +
Sbjct: 467 VIGKGGKTVNELQNLTSAEV-IVPRDQT 493
>gi|432866565|ref|XP_004070866.1| PREDICTED: poly(rC)-binding protein 2-like [Oryzias latipes]
Length = 318
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 153/335 (45%), Gaps = 43/335 (12%)
Query: 297 SGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVIT 356
S LV + L IR+L ++G +IGK G ++K +R+ SGA+I++ + N E +IT
Sbjct: 3 SSLVEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIIT 60
Query: 357 VTA-IESPDDIKSMAVEAVLLLQTKINDEDDDT-------VTIRLLVSSKVIGCIIGKSG 408
+ S SM +E L+ I++ ++ VT+RL+V + G +IGK G
Sbjct: 61 LAGPTTSIFKAFSMIIEK---LEEDISNSMTNSTATSKPPVTMRLVVPASQCGSLIGKGG 117
Query: 409 SIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDR 468
I EIR+ A V+++ P ++ + + V G S+ + + QI + + + K
Sbjct: 118 CKIKEIRESAGAQVQVAGDMLP---NSTERAITVAGTPQSIIECVKQICIVMLESPPKGV 174
Query: 469 DGSRNP-PVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYG 527
P P G+ I++ G +A + G + L
Sbjct: 175 TIPYRPKPSGSPVIFAGG----------------------QAYAVQGQHAIPQPDLTKLH 212
Query: 528 SLSMGDSPYGSMSSYSSKLYGGLPPPL---TLEVLVPANAVGKVIGKAGSNLANIRKISG 584
L+M SP+ ++ + G+ + E+ +P + +G +IG+ G+ + IR++SG
Sbjct: 213 QLAMQQSPF-PIAHSNQGFQAGMDASAQTGSHELTIPNDLIGCIIGRQGAKINEIRQMSG 271
Query: 585 ATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQA 619
A I++++ DR I+G+ AE LI A
Sbjct: 272 AQIKIANPVEGSTDRQVTITGSHASISLAEYLINA 306
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 145/334 (43%), Gaps = 54/334 (16%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH 89
E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R++T+
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLAG- 63
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSS 149
+ F+ + K+ I+N++ N+T K +++VP+S
Sbjct: 64 ----PTTSIFKAFS---------MIIEKLEEDISNSMTNSTATSKP---PVTMRLVVPAS 107
Query: 150 QSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALF 209
Q ++IGK G IK +R ++V T + + ++G +++ + +
Sbjct: 108 QCGSLIGKGGCKIKEIRESAGAQVQVAGDMLPNST-------ERAITVAGTPQSIIECVK 160
Query: 210 AISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILG 269
I +M + P+ T+ P PS P+ GG A + ++P
Sbjct: 161 QICIVMLESPPK-----GVTIPYRPK----PSGSPVIFAGG---QAYAVQGQHAIPQ--- 205
Query: 270 AARVPD---LQGYADTGNTWPVYSTGLSLVSGLVGASQ--SEELVIRVLCPFNKIGRVIG 324
PD L A + +P+ + +G+ ++Q S EL I P + IG +IG
Sbjct: 206 ----PDLTKLHQLAMQQSPFPIAHSNQGFQAGMDASAQTGSHELTI----PNDLIGCIIG 257
Query: 325 KGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
+ G I IRQ SGAQI + + + + +T+T
Sbjct: 258 RQGAKINEIRQMSGAQIKIANPVEGSTDRQVTIT 291
>gi|386771593|ref|NP_730700.2| mushroom-body expressed, isoform G [Drosophila melanogaster]
gi|442634089|ref|NP_001262197.1| mushroom-body expressed, isoform M [Drosophila melanogaster]
gi|383292066|gb|AAN12194.2| mushroom-body expressed, isoform G [Drosophila melanogaster]
gi|440216174|gb|AGB94890.1| mushroom-body expressed, isoform M [Drosophila melanogaster]
Length = 359
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 153/332 (46%), Gaps = 40/332 (12%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
L IR++ ++G +IGK G + R+ SGA+I++ D + E ++TV+ +
Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISD--GSCPERIVTVSGTTN----- 76
Query: 368 SMAVEAVLLLQTKINDEDDDT-------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTKA 420
A+ + L TK +E +D + IRL+V + G +IGKSGS I EIR+ T
Sbjct: 77 --AIFSAFTLITKKFEEFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGC 134
Query: 421 DVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADH 480
++++ P ++ + V + G + + QI L + + PP GA
Sbjct: 135 SIQVASEMLP---NSTERAVTLSGSAEQITQCIYQICLVMLES----------PPRGATI 181
Query: 481 IYSSGTGISMPPLLP---SIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYG 537
Y ++ P +L + G + + + + L++ L G S G +
Sbjct: 182 PYRPKPQVTGPVILANGQAFTIQGNYAVPTQEVAKNPLASLAALGLAGMNPASTGGINHT 241
Query: 538 SMSSYS-SKLYGGLPP----PLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDS 592
++++ + S+L P E+ V + +G +IGK G+ +A IR+ISGA I +S+
Sbjct: 242 ALAALAGSQLRTANPANRAQQQQHEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNC 301
Query: 593 KSSRG---DRVALISGTPEQKRAAENLIQAFI 621
+ G DR ISG P+ A+ LI I
Sbjct: 302 EEREGGNTDRTITISGNPDSVALAQYLINMRI 333
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 149/341 (43%), Gaps = 51/341 (14%)
Query: 36 SVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKED 95
++ R++ +GS+IGK G+++N R+E+ A++ + D +R+VT+
Sbjct: 23 TLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDG--SCPERIVTV--------- 71
Query: 96 VEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANII 155
+A+ I D K K + +++VP+SQ ++I
Sbjct: 72 -------------SGTTNAIFSAFTLITKKFEEFNDVGKVGKTQIPIRLIVPASQCGSLI 118
Query: 156 GKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIM 215
GK+G+ IK +R T SI+V + T + V +SG +E + + ++ I +M
Sbjct: 119 GKSGSKIKEIRQTTGCSIQVASEMLPNST-------ERAVTLSGSAEQITQCIYQICLVM 171
Query: 216 YKFSPR-EDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVP 274
+ PR IP + P I+ ++ + G Y +P++ V A+
Sbjct: 172 LESPPRGATIPYRPKPQVTGPVIL--ANGQAFTIQGNYA-----VPTQEVAKNPLASLAA 224
Query: 275 DLQGYADTGNTWPVYSTGLSLVSG-----LVGASQSEELVIRVLCPFNKIGRVIGKGGGT 329
+ +T + T L+ ++G A+++++ + + IG +IGKGG
Sbjct: 225 LGLAGMNPASTGGINHTALAALAGSQLRTANPANRAQQQQHEMTVSNDLIGCIIGKGGTK 284
Query: 330 IKSIRQASGAQIDVDDTKD----NRDECVITVTAIESPDDI 366
I IRQ SGA I + + ++ N D T+T +PD +
Sbjct: 285 IAEIRQISGAMIRISNCEEREGGNTDR---TITISGNPDSV 322
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 7/83 (8%)
Query: 381 INDEDDD-TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDEL 439
I ED T+TIRL++ K +G IIGK G I+N R+ + A + IS G P + +
Sbjct: 15 IKHEDPSVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCP------ERI 68
Query: 440 VEVVGEVGSVRDALVQIILRLRD 462
V V G ++ A I + +
Sbjct: 69 VTVSGTTNAIFSAFTLITKKFEE 91
>gi|395540426|ref|XP_003772156.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein
3-B-like [Sarcophilus harrisii]
Length = 587
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 152/326 (46%), Gaps = 43/326 (13%)
Query: 298 GLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITV 357
G G + ++ +R+L P +G +IGK G TI++I + + ++ID+ K+N +
Sbjct: 188 GAAGQNHQNDIPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDI-HRKENAGASEKPI 246
Query: 358 TAIESPDDIKSMAVEAVLLLQTKINDED-DDTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
T SP+ + + ++Q + D D + +++L + +G +IGK G + +I +
Sbjct: 247 TIHASPEGCSTACKIIMEIMQKEAQDTKFTDEIPLKILAHNNFVGRLIGKEGRNLKKIEQ 306
Query: 417 RTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPV 476
T + IS + + + + V G + + A +I+ ++R+ D +
Sbjct: 307 DTDTKITISPLQELTLYNP-ERTITVKGSIETCGKAEEEIMKKIRESYESD--------L 357
Query: 477 GADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSG----SGIGMLSSSSLYGYGSLSMG 532
A ++ + LLP + + LG + SG S +G+ S+++ Y
Sbjct: 358 SAMNLQAH--------LLPGL-NLNALGLFPASTSGIPSPSTLGVPSAAAATNY------ 402
Query: 533 DSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDS 592
PYG + T+ + +PA AVG +IGK G ++ + + +GA+I+++
Sbjct: 403 -LPYGQQAETE-----------TVHLFIPAMAVGAIIGKMGQHIKQLSRFAGASIKIAPP 450
Query: 593 KSSRG-DRVALISGTPEQKRAAENLI 617
++ +R+ +I+G PE + A+ I
Sbjct: 451 ETPDAKERMVIITGPPEAQFKAQGRI 476
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 94/437 (21%), Positives = 176/437 (40%), Gaps = 80/437 (18%)
Query: 31 KGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSH 89
+ ++ + R+L P +G++IGK G I +I ++T++++ + GA ++ +TI++
Sbjct: 192 QNHQNDIPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGASEKPITIHA- 250
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSS 149
E A ++++ A D K ++ +IL ++
Sbjct: 251 --------------SPEGCSTACKIIMEIMQKEAQ--------DTKFTDEIPLKILAHNN 288
Query: 150 QSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALF 209
+IGK G +K++ T T I ++P + + + G E KA
Sbjct: 289 FVGRLIGKEGRNLKKIEQDTDTKITISPLQ-----ELTLYNPERTITVKGSIETCGKAE- 342
Query: 210 AISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSV----P 265
IM K +RE+ S + ++ + GL NA + P+ + P
Sbjct: 343 --EEIMKK------------IRESYESDLSAMNLQAHLLPGLNLNALGLFPASTSGIPSP 388
Query: 266 SILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGK 325
S LG Y G Q+E + + P +G +IGK
Sbjct: 389 STLGVPSAAAATNYLPYGQ-------------------QAETETVHLFIPAMAVGAIIGK 429
Query: 326 GGGTIKSIRQASGAQIDVD--DTKDNRDECVITVTAIESPDDIKSMA---VEAVLLLQTK 380
G IK + + +GA I + +T D ++ VI I P + + A + L +
Sbjct: 430 MGQHIKQLSRFAGASIKIAPPETPDAKERMVI----ITGPPEAQFKAQGRIYGKLKEENF 485
Query: 381 INDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDE-L 439
+++ + + V S G +IGK G +NE++ T A+V + + P D NDE +
Sbjct: 486 FGPKEEVKLEAHIKVPSYAAGRVIGKGGKTVNELQNLTSAEVVVPRDQIP---DENDEVI 542
Query: 440 VEVVGEVGSVRDALVQI 456
V++ G + + A +I
Sbjct: 543 VKITGHFYACQLAQRKI 559
>gi|281341187|gb|EFB16771.1| hypothetical protein PANDA_007698 [Ailuropoda melanoleuca]
Length = 323
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 146/325 (44%), Gaps = 40/325 (12%)
Query: 327 GGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDD--IKSMAVEAVLLLQTKINDE 384
G T+K +R+ SGA+I++ + N E ++T+T P D K+ A+ A + IN
Sbjct: 6 GETVKKMREESGARINISE--GNCPERIVTITG---PTDAIFKAFAMIAYKFEEDIINSM 60
Query: 385 DDDT------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDE 438
+ VT+RL+V + G +IGK GS I EIR+ T A V+++ GD ++ +
Sbjct: 61 SNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVA-GDM--LPNSTER 117
Query: 439 LVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSGTGISMPPLLPSIP 498
V + G ++ + QI + + + K P + + +G + PL S
Sbjct: 118 AVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTPVIFAGGQVRADPLAASTA 177
Query: 499 --PVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSM----------------S 540
+ A + G + L L+M +P+ + S
Sbjct: 178 NLSLLLQPPPLPAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSS 237
Query: 541 SYSSKLYG---GL---PPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS 594
+ L G GL PP T E+ +P + +G +IG+ G+ + IR++SGA I+++++
Sbjct: 238 EEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE 297
Query: 595 SRGDRVALISGTPEQKRAAENLIQA 619
+R I+GTP A+ LI A
Sbjct: 298 GSSERQITITGTPANISLAQYLINA 322
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 137/350 (39%), Gaps = 91/350 (26%)
Query: 54 KSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQD 113
+ G+ + +R+E+ AR+ + + +R+VTI D
Sbjct: 4 QKGETVKKMREESGARINISEG--NCPERIVTI----------------------TGPTD 39
Query: 114 ALLKVHAAIA-----NAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSK 168
A+ K A IA + + + +++ K +++VP+SQ ++IGK G+ IK +R
Sbjct: 40 AIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRES 99
Query: 169 TRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPR-EDIPLE 227
T ++V T + V ISG +A+ + + I +M + P+ IP
Sbjct: 100 TGAQVQVAGDMLPNST-------ERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYR 152
Query: 228 TTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRS------------VPSILGAARV-- 273
P+ P+ GG ADP+ S + +I G +
Sbjct: 153 PK----------PASTPVIFAGGQV-RADPLAASTANLSLLLQPPPLPAYTIQGQYAIPH 201
Query: 274 PDLQG----------YADTGNTWPVY-STGLSLVS-----GLVGAS---------QSEEL 308
PDL + G T P + L L S L+G S + EL
Sbjct: 202 PDLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHEL 261
Query: 309 VIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
I P + IG +IG+ G I IRQ SGAQI + + + E IT+T
Sbjct: 262 TI----PNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITIT 307
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 40/66 (60%), Gaps = 3/66 (4%)
Query: 302 ASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDV-DDTKDNRDECVITVTAI 360
A+ + +R++ P ++ G +IGKGG IK IR+++GAQ+ V D N E +T++
Sbjct: 65 ATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISG- 123
Query: 361 ESPDDI 366
+PD I
Sbjct: 124 -TPDAI 128
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 31/48 (64%)
Query: 39 YRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTI 86
+ + P+ +IG +IG+ G IN IRQ + A++K+ + G+ +R +TI
Sbjct: 259 HELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITI 306
Score = 40.0 bits (92), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 37 VIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTI 86
V R++ P GS+IGK G I IR+ T A+V+V D P + +R VTI
Sbjct: 71 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTI 121
>gi|417399455|gb|JAA46731.1| Putative polyc-binding alphacp-1 [Desmodus rotundus]
Length = 351
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 162/354 (45%), Gaps = 47/354 (13%)
Query: 297 SGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVIT 356
+G++ + L IR+L ++G +IGK G ++K +R+ SGA+I++ + N E +IT
Sbjct: 3 TGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIIT 60
Query: 357 VTAIESPDDIKSMAVEAVL-LLQTKINDEDDDT-------VTIRLLVSSKVIGCIIGKSG 408
+ P + A ++ L+ I+ ++ VT+RL+V + G +IGK G
Sbjct: 61 LAG---PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGG 117
Query: 409 SIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDD----- 463
I EIR+ T A V+++ P ++ + + + G S+ + + QI + + +
Sbjct: 118 CKIKEIRESTGAQVQVAGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLETLSQSP 174
Query: 464 ----ALKDRDGSRNPPV---GADHIYSSGT-GISMPPLLPSI--------PPVGPLGYDQ 507
+ R + PV G YS+G+ S P PS+ PP+
Sbjct: 175 PKGVTIPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPL------- 227
Query: 508 RADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGL--PPPLTLEVLVPANAV 565
A + G + L L+M S + M+ ++ L T E+ +P N +
Sbjct: 228 EAYTIQGQYAIPQPDLTKLHQLAMQQSHF-PMTHGNTGFSASLDASTQTTHELTIPNNLI 286
Query: 566 GKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQA 619
G +IG+ G+N+ IR++SGA I++++ R I+G+ A+ LI A
Sbjct: 287 GCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLINA 340
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 82/364 (22%), Positives = 147/364 (40%), Gaps = 80/364 (21%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH 89
E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R++T
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIIT---- 60
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAV-----ANATDNDKKRKEKEECQI 144
L +A+ K A I + + ++ T++ + ++
Sbjct: 61 ------------------LAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRL 102
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAV 204
+VP+SQ ++IGK G IK +R T ++V T + + I+G +++
Sbjct: 103 VVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNST-------ERAITIAGIPQSI 155
Query: 205 KKALFAISAIMYKFSPREDIPLETTVREAPPSIIIP-----SDVPIYPPGGL-------- 251
+ + I +M LET + P + IP S P+ GG
Sbjct: 156 IECVKQICVVM----------LETLSQSPPKGVTIPYRPKPSSSPVIFAGGQDRYSTGSD 205
Query: 252 ---YPNADPIL--------PSRSVPSILGAARVPD-----LQGYADTGNTWPVYSTGLSL 295
+P+ P + P +I G +P L A + +P+
Sbjct: 206 SASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGF 265
Query: 296 VSGLVGASQS-EELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECV 354
+ L ++Q+ EL I P N IG +IG+ G I IRQ SGAQI + + +
Sbjct: 266 SASLDASTQTTHELTI----PNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQ 321
Query: 355 ITVT 358
+T+T
Sbjct: 322 VTIT 325
>gi|146336943|gb|ABQ23585.1| putative KH-domain containing protein [Medicago truncatula]
Length = 334
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 139/317 (43%), Gaps = 41/317 (12%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSM 369
+R L + G VIGKGG TI + SGA+I + + + + +
Sbjct: 38 VRFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSRNNEFFPGTTDRIIMVSGAINEVLR 97
Query: 370 AVEAVL-LLQTKINDEDDDTV----TIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRI 424
AVE +L L ++++ EDD+ V +RL+V + G IIGK G+ I + ++A ++I
Sbjct: 98 AVELILSKLLSELHSEDDNDVEPKTKVRLIVPNGSCGGIIGKGGATIRSFIEESQAGIKI 157
Query: 425 SKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSS 484
S D ND +V V G + + I+ +L +D S + P Y S
Sbjct: 158 SPQDNSYYGQ-NDRIVTVTGTLDEQMRGIDLIVSKLAEDPHYSH--SMSSPFTYSGAYVS 214
Query: 485 G-TGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYS 543
G G+ +LPS+ P G + R + G+G +S S+++G
Sbjct: 215 GYQGVPYTYVLPSVAPPAYNGVNYRPN-GTGAKFQNSKEDRS-NSMTIG----------- 261
Query: 544 SKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSK---SSRGDRV 600
V +G V+G+ G N+++I + SGA I++SD S DR
Sbjct: 262 ----------------VADEHIGLVVGRGGRNISDISQTSGAKIKISDRGDYISGTTDRK 305
Query: 601 ALISGTPEQKRAAENLI 617
I+G+ R AE++I
Sbjct: 306 VTITGSQRAIRTAESMI 322
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 134/320 (41%), Gaps = 61/320 (19%)
Query: 34 EESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV---DPFPGAKDRVVTIYSHV 90
E+ R L + GSVIGK G I + ++ AR+++ + FPG DR++ + +
Sbjct: 33 EKPTYVRFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSRNNEFFPGTTDRIIMVSGAI 92
Query: 91 KDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQ 150
E L A + L K + + + + DND + K K +++VP+
Sbjct: 93 N--------------EVLRAVELILSK----LLSELHSEDDNDVEPKTK--VRLIVPNGS 132
Query: 151 SANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFA 210
IIGK GATI+ +++ IK++P+D +S + D V ++G + + +
Sbjct: 133 CGGIIGKGGATIRSFIEESQAGIKISPQD-----NSYYGQNDRIVTVTG---TLDEQMRG 184
Query: 211 ISAIMYKFS--PREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSIL 268
I I+ K + P + + + + VP +LPS + P+
Sbjct: 185 IDLIVSKLAEDPHYSHSMSSPFTYSGAYVSGYQGVPY----------TYVLPSVAPPAYN 234
Query: 269 GAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGG 328
G P+ G A N+ S ++ +G + IG V+G+GG
Sbjct: 235 GVNYRPNGTG-AKFQNSKEDRSNSMT-----IGVADEH------------IGLVVGRGGR 276
Query: 329 TIKSIRQASGAQIDVDDTKD 348
I I Q SGA+I + D D
Sbjct: 277 NISDISQTSGAKIKISDRGD 296
Score = 40.0 bits (92), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 25 INEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV---DPFPGAKD 81
++ +D+ E R++ P+G G +IGK G I S +E++A +K+ + + G D
Sbjct: 110 LHSEDDNDVEPKTKVRLIVPNGSCGGIIGKGGATIRSFIEESQAGIKISPQDNSYYGQND 169
Query: 82 RVVTI 86
R+VT+
Sbjct: 170 RIVTV 174
>gi|402860703|ref|XP_003894762.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 3 [Papio anubis]
Length = 536
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 149/333 (44%), Gaps = 41/333 (12%)
Query: 301 GASQSEE--LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
G SQ+ + +R+L P +G +IGK G TIK+I + + +++D+ K+N VT
Sbjct: 122 GTSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHR-KENSGAAEKPVT 180
Query: 359 AIESPDDIKSMAVEAVLLLQTKINDEDD--DTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
+P+ S A +L + K DE + + +++L + ++G +IGK G + +I
Sbjct: 181 IHATPEGT-SEACRMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEH 239
Query: 417 RTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPV 476
T + IS + + + V G V + A ++I+ +LR+ A ++ + N
Sbjct: 240 ETGTKITISSLQDLSIYNP-ERTITVKGTVEACASAEIEIMKKLRE-AFENDMLAVNQQA 297
Query: 477 GADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPY 536
L+P L +G+ +LS + + P+
Sbjct: 298 N---------------LIPG------LNLSALGIFSTGLSVLSPPAGPRGAPPAAPYHPF 336
Query: 537 GSMSSYSSKLY-----------GGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGA 585
+ S Y S LY P + + +P AVG +IGK G+++ + + +GA
Sbjct: 337 ATHSGYFSSLYPHHQFGPFPHHHSYPEQEVVNLFIPTQAVGAIIGKKGAHIKQLARFAGA 396
Query: 586 TIEMSDSKS-SRGDRVALISGTPEQKRAAENLI 617
+I+++ ++ +R+ +I+G PE + A+ I
Sbjct: 397 SIKIAPAEGPDVSERMVIITGPPEAQFKAQGRI 429
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 89/393 (22%), Positives = 153/393 (38%), Gaps = 91/393 (23%)
Query: 142 CQILVPSSQSANIIGKAGATIKRLRSKTRT-----------------SIKVTPKDASEPT 184
+ILVP+ IIGK G TIK + +T++ +I TP+ SE
Sbjct: 133 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTSE-- 190
Query: 185 HSCAMEFDNFVLISGESEAVKKA------LFAISAIMYKFSPREDIPLETTVREAPPSII 238
+C M + ++ E++ K A + A + ++ + +E L+ E I
Sbjct: 191 -ACRMILE---IMQKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKIT 246
Query: 239 IPS--DVPIYPPGGLYPNADPILPSRS----VPSILGAARVPDLQGYADTGNTWP----- 287
I S D+ IY P + S + L A D+ N P
Sbjct: 247 ISSLQDLSIYNPERTITVKGTVEACASAEIEIMKKLREAFENDMLAVNQQANLIPGLNLS 306
Query: 288 ---VYSTGLSLVS---------------------GLVGA--------------SQSEELV 309
++STGLS++S G + S E+ V
Sbjct: 307 ALGIFSTGLSVLSPPAGPRGAPPAAPYHPFATHSGYFSSLYPHHQFGPFPHHHSYPEQEV 366
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTK--DNRDECVITVTAIESPDDIK 367
+ + P +G +IGK G IK + + +GA I + + D + VI I P + +
Sbjct: 367 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVI----ITGPPEAQ 422
Query: 368 SMA---VEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRI 424
A + L + N +++ + + V S G +IGK G +NE++ T A+V +
Sbjct: 423 FKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEVIV 482
Query: 425 SKGDKPKCADANDE-LVEVVGEVGSVRDALVQI 456
+ P D N+E +V ++G + + A +I
Sbjct: 483 PRDQTP---DENEEVIVRIIGHFFASQTAQRKI 512
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 10/97 (10%)
Query: 138 EKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLI 197
E+E + +P+ IIGK GA IK+L SIK+ P + + + + V+I
Sbjct: 363 EQEVVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVS-------ERMVII 415
Query: 198 SGESEAVKKALFAISAIMYK---FSPREDIPLETTVR 231
+G EA KA I + + F+P+E++ LE +R
Sbjct: 416 TGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIR 452
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 58/148 (39%), Gaps = 24/148 (16%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPF-PGAKDRVVTIYSHVKDK 93
E + + P +G++IGK G I + + A +K+ P +R+V I
Sbjct: 363 EQEVVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII------- 415
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
+A K I + + K + K E I VPSS +
Sbjct: 416 ---------------TGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGR 460
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+IGK G T+ L++ T + + P+D +
Sbjct: 461 VIGKGGKTVNELQNLTSAEV-IVPRDQT 487
>gi|363747263|ref|XP_003643960.1| PREDICTED: poly(rC)-binding protein 2-like isoform 2 [Gallus
gallus]
Length = 349
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 166/353 (47%), Gaps = 41/353 (11%)
Query: 297 SGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVIT 356
+G++ + L IR+L ++G +IGK G ++K +R+ SGA+I++ + N E +IT
Sbjct: 3 TGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIIT 60
Query: 357 VTAIESPDDIKSMAVEAVL-LLQTKINDEDDDT-------VTIRLLVSSKVIGCIIGKSG 408
+ P + A ++ L+ I+ ++ VT+RL+V + G +IGK G
Sbjct: 61 LAG---PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGG 117
Query: 409 SIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKD- 467
I EIR+ T A V+++ P ++ + + + G S+ + + QI + + + K
Sbjct: 118 CKIKEIRESTGAQVQVAGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLESPPKGV 174
Query: 468 ----RDGSRNPPV---GADHIYSSGTGISMPPLLPSIPPVGPL-GYDQRADSGSGIGMLS 519
R + PV G YSSG+ S P PS+ L G Q A + G +
Sbjct: 175 TIPYRPKPSSSPVIFAGGQDRYSSGSA-SYPHTAPSMCLNSDLEGPPQEAYTIQGQYAIP 233
Query: 520 SSSLYGYGSLSM---------GDSPYGSMSSYSSKL---YGGL---PPPLTLEVLVPANA 564
L L+M G++ + + S S ++ + GL + E+ +P +
Sbjct: 234 QPDLTKLHQLAMQQSHFPMSHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDL 293
Query: 565 VGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLI 617
+G +IG+ G+ + IR++SGA I++++ DR I+G+ A+ LI
Sbjct: 294 IGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLI 346
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 85/371 (22%), Positives = 154/371 (41%), Gaps = 86/371 (23%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH 89
E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R++T
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIIT---- 60
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAV-----ANATDNDKKRKEKEECQI 144
L +A+ K A I + + ++ T++ + ++
Sbjct: 61 ------------------LAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRL 102
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAV 204
+VP+SQ ++IGK G IK +R T ++V T + + I+G +++
Sbjct: 103 VVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNST-------ERAITIAGIPQSI 155
Query: 205 KKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGL---------YPNA 255
+ + I +M + P+ T+ P PS P+ GG YP+
Sbjct: 156 IECVKQICVVMLESPPK-----GVTIPYRPK----PSSSPVIFAGGQDRYSSGSASYPHT 206
Query: 256 DPIL--------PSRSVPSILGAARVPD-----LQGYADTGNTWPVY--STGLSLV---- 296
P + P + +I G +P L A + +P+ +TG S +
Sbjct: 207 APSMCLNSDLEGPPQEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMSHGNTGFSGIESSS 266
Query: 297 -------SGLVGASQ--SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTK 347
+GL ++Q S EL I P + IG +IG+ G I IRQ SGAQI + +
Sbjct: 267 PEVKGYWAGLDASAQTTSHELTI----PNDLIGCIIGRQGAKINEIRQMSGAQIKIANPV 322
Query: 348 DNRDECVITVT 358
+ + +T+T
Sbjct: 323 EGSTDRQVTIT 333
>gi|355559801|gb|EHH16529.1| hypothetical protein EGK_11818, partial [Macaca mulatta]
Length = 542
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 152/333 (45%), Gaps = 41/333 (12%)
Query: 301 GASQSEE--LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
G SQ+ + +R+L P +G +IGK G TIK+I + + +++D+ K+N VT
Sbjct: 128 GTSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHR-KENSGAAEKPVT 186
Query: 359 AIESPDDIKSMAVEAVLLLQTKINDEDD--DTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
+P+ S A +L + K DE + + +++L + ++G +IGK G + +I
Sbjct: 187 IHATPEGT-SEACRMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEH 245
Query: 417 RTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPV 476
T + IS + + + V G V + A ++I+ +LR+ A ++ + N
Sbjct: 246 ETGTKITISSLQDLSIYNP-ERTITVKGTVEACASAEIEIMKKLRE-AFENDMLAVNQQA 303
Query: 477 GADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPY 536
L+P + + LG +G+ +LS + + P+
Sbjct: 304 N---------------LIPGLN-LSALGI-----FSTGLSVLSPPAGPRGAPPAAPYHPF 342
Query: 537 GSMSSYSSKLY-----------GGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGA 585
+ S Y S LY P + + +P AVG +IGK G+++ + + +GA
Sbjct: 343 ATHSGYFSSLYPHHQFGPFPHHHSYPEQEVVNLFIPTQAVGAIIGKKGAHIKQLARFAGA 402
Query: 586 TIEMSDSKS-SRGDRVALISGTPEQKRAAENLI 617
+I+++ ++ +R+ +I+G PE + A+ I
Sbjct: 403 SIKIAPAEGPDVSERMVIITGPPEAQFKAQGRI 435
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 88/393 (22%), Positives = 152/393 (38%), Gaps = 91/393 (23%)
Query: 142 CQILVPSSQSANIIGKAGATIKRLRSKTRT-----------------SIKVTPKDASEPT 184
+ILVP+ IIGK G TIK + +T++ +I TP+ SE
Sbjct: 139 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTSE-- 196
Query: 185 HSCAMEFDNFVLISGESEAVKKA------LFAISAIMYKFSPREDIPLETTVREAPPSII 238
+C M + ++ E++ K A + A + ++ + +E L+ E I
Sbjct: 197 -ACRMILE---IMQKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKIT 252
Query: 239 IPS--DVPIYPPGGLYPNADPILPSRS----VPSILGAARVPDLQGYADTGNTWP----- 287
I S D+ IY P + S + L A D+ N P
Sbjct: 253 ISSLQDLSIYNPERTITVKGTVEACASAEIEIMKKLREAFENDMLAVNQQANLIPGLNLS 312
Query: 288 ---VYSTGLSLVS---------------------GLVGA--------------SQSEELV 309
++STGLS++S G + S E+ V
Sbjct: 313 ALGIFSTGLSVLSPPAGPRGAPPAAPYHPFATHSGYFSSLYPHHQFGPFPHHHSYPEQEV 372
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTK--DNRDECVITVTAIESPDDIK 367
+ + P +G +IGK G IK + + +GA I + + D + VI I P + +
Sbjct: 373 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVI----ITGPPEAQ 428
Query: 368 SMA---VEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRI 424
A + L + +++ + + V S G +IGK G +NE++ T A+V +
Sbjct: 429 FKAQGRIFGKLKEEKFFTPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEVIV 488
Query: 425 SKGDKPKCADANDE-LVEVVGEVGSVRDALVQI 456
+ P D N+E +V ++G + + A +I
Sbjct: 489 PRDQTP---DENEEVIVRIIGHFFASQTAQRKI 518
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 10/97 (10%)
Query: 138 EKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLI 197
E+E + +P+ IIGK GA IK+L SIK+ P + + + + V+I
Sbjct: 369 EQEVVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVS-------ERMVII 421
Query: 198 SGESEAVKKALFAISAIMYK---FSPREDIPLETTVR 231
+G EA KA I + + F+P+E++ LE +R
Sbjct: 422 TGPPEAQFKAQGRIFGKLKEEKFFTPKEEVKLEAHIR 458
Score = 39.3 bits (90), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 57/148 (38%), Gaps = 24/148 (16%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPF-PGAKDRVVTIYSHVKDK 93
E + + P +G++IGK G I + + A +K+ P +R+V I
Sbjct: 369 EQEVVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII------- 421
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
+A K I + K + K E I VPSS +
Sbjct: 422 ---------------TGPPEAQFKAQGRIFGKLKEEKFFTPKEEVKLEAHIRVPSSTAGR 466
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+IGK G T+ L++ T + + P+D +
Sbjct: 467 VIGKGGKTVNELQNLTSAEV-IVPRDQT 493
>gi|344282127|ref|XP_003412826.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Loxodonta africana]
Length = 599
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 149/333 (44%), Gaps = 41/333 (12%)
Query: 301 GASQSEE--LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
GASQ+ + +R+L P +G +IGK G TIK+I + + +++D+ K+N VT
Sbjct: 185 GASQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHR-KENSGAAEKPVT 243
Query: 359 AIESPDDIKSMAVEAVLLLQTKINDEDD--DTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
+P+ S A +L + K DE + + +++L + ++G +IGK G + +I
Sbjct: 244 IHATPEGT-SEACRMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEH 302
Query: 417 RTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPV 476
T + IS + + + V G V + A ++I+ +LR+ A ++ + N
Sbjct: 303 ETGTKITISSLQDLSIYNP-ERTITVKGTVEACATAEIEIMKKLRE-AFENDMLAVNQQA 360
Query: 477 GADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPY 536
L+P L +G+ +L + + P+
Sbjct: 361 N---------------LIPG------LNLSALGIFSTGLSVLPPPAGPRGAPPAPPYHPF 399
Query: 537 GSMSSYSSKLY-----------GGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGA 585
+ S Y S LY P + + +P AVG +IGK G+++ + + +GA
Sbjct: 400 ATHSGYFSSLYPPHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGA 459
Query: 586 TIEMSDSKS-SRGDRVALISGTPEQKRAAENLI 617
+I+++ ++ +R+ +I+G PE + A+ I
Sbjct: 460 SIKIAPAEGPDVSERMVIITGPPEAQFKAQGRI 492
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 76/160 (47%), Gaps = 13/160 (8%)
Query: 303 SQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTK--DNRDECVITVTAI 360
S E+ ++ + P +G +IGK G IK + + +GA I + + D + VI I
Sbjct: 423 SYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVI----I 478
Query: 361 ESPDDIKSMA---VEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKR 417
P + + A + L + N +++ + + V S G +IGK G +NE++
Sbjct: 479 TGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNL 538
Query: 418 TKADVRISKGDKPKCADANDE-LVEVVGEVGSVRDALVQI 456
T A+V + + P D N+E +V ++G + + A +I
Sbjct: 539 TSAEVIVPRDQTP---DENEEVIVRIIGHFFASQTAQRKI 575
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 58/148 (39%), Gaps = 24/148 (16%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPF-PGAKDRVVTIYSHVKDK 93
E I + P +G++IGK G I + + A +K+ P +R+V I
Sbjct: 426 EQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII------- 478
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
+A K I + + K + K E I VPSS +
Sbjct: 479 ---------------TGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGR 523
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+IGK G T+ L++ T + + P+D +
Sbjct: 524 VIGKGGKTVNELQNLTSAEV-IVPRDQT 550
Score = 38.9 bits (89), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 63/138 (45%), Gaps = 24/138 (17%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKEDVEV 98
RIL P +G++IGK G I +I ++T++RV + GA ++ VTI++
Sbjct: 197 RILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHA---------- 246
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
E A +L++ A ++ K E+ +IL + +IGK
Sbjct: 247 -----TPEGTSEACRMILEIMQKEA--------DETKLAEEIPLKILAHNGLVGRLIGKE 293
Query: 159 GATIKRLRSKTRTSIKVT 176
G +K++ +T T I ++
Sbjct: 294 GRNLKKIEHETGTKITIS 311
>gi|332215037|ref|XP_003256643.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 6 [Nomascus leucogenys]
Length = 542
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 152/333 (45%), Gaps = 41/333 (12%)
Query: 301 GASQSEE--LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
G SQ+ + +R+L P +G +IGK G TIK+I + + +++D+ K+N VT
Sbjct: 128 GTSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHR-KENSGAAEKPVT 186
Query: 359 AIESPDDIKSMAVEAVLLLQTKINDEDD--DTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
+P+ S A +L + K DE + + +++L + ++G +IGK G + +I
Sbjct: 187 IHATPEGT-SEACRMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEH 245
Query: 417 RTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPV 476
T + IS + + + V G V + A ++I+ +LR+ A ++ + N
Sbjct: 246 ETGTKITISSLQDLSIYNP-ERTITVKGTVEACASAEIEIMKKLRE-AFENDMLAVNQQA 303
Query: 477 GADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPY 536
L+P + + LG +G+ +LS + + P+
Sbjct: 304 N---------------LIPGLN-LSALGI-----FSTGLSVLSPPAGPRGAPPAAPYHPF 342
Query: 537 GSMSSYSSKLY-----------GGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGA 585
+ S Y S LY P + + +P AVG +IGK G+++ + + +GA
Sbjct: 343 ATHSGYFSSLYPHHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGA 402
Query: 586 TIEMSDSKS-SRGDRVALISGTPEQKRAAENLI 617
+I+++ ++ +R+ +I+G PE + A+ I
Sbjct: 403 SIKIAPAEGPDVSERMVIITGPPEAQFKAQGRI 435
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 88/393 (22%), Positives = 153/393 (38%), Gaps = 91/393 (23%)
Query: 142 CQILVPSSQSANIIGKAGATIKRLRSKTRT-----------------SIKVTPKDASEPT 184
+ILVP+ IIGK G TIK + +T++ +I TP+ SE
Sbjct: 139 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTSE-- 196
Query: 185 HSCAMEFDNFVLISGESEAVKKA------LFAISAIMYKFSPREDIPLETTVREAPPSII 238
+C M + ++ E++ K A + A + ++ + +E L+ E I
Sbjct: 197 -ACRMILE---IMQKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKIT 252
Query: 239 IPS--DVPIYPPGGLYPNADPILPSRS----VPSILGAARVPDLQGYADTGNTWP----- 287
I S D+ IY P + S + L A D+ N P
Sbjct: 253 ISSLQDLSIYNPERTITVKGTVEACASAEIEIMKKLREAFENDMLAVNQQANLIPGLNLS 312
Query: 288 ---VYSTGLSLVS---------------------GLVGA--------------SQSEELV 309
++STGLS++S G + S E+ +
Sbjct: 313 ALGIFSTGLSVLSPPAGPRGAPPAAPYHPFATHSGYFSSLYPHHQFGPFPHHHSYPEQEI 372
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTK--DNRDECVITVTAIESPDDIK 367
+ + P +G +IGK G IK + + +GA I + + D + VI I P + +
Sbjct: 373 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVI----ITGPPEAQ 428
Query: 368 SMA---VEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRI 424
A + L + N +++ + + V S G +IGK G +NE++ T A+V +
Sbjct: 429 FKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEVIV 488
Query: 425 SKGDKPKCADANDE-LVEVVGEVGSVRDALVQI 456
+ P D N+E +V ++G + + A +I
Sbjct: 489 PRDQTP---DENEEVIVRIIGHFFASQTAQRKI 518
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 10/97 (10%)
Query: 138 EKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLI 197
E+E + +P+ IIGK GA IK+L SIK+ P + + + + V+I
Sbjct: 369 EQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVS-------ERMVII 421
Query: 198 SGESEAVKKALFAISAIMYK---FSPREDIPLETTVR 231
+G EA KA I + + F+P+E++ LE +R
Sbjct: 422 TGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIR 458
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 58/148 (39%), Gaps = 24/148 (16%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPF-PGAKDRVVTIYSHVKDK 93
E I + P +G++IGK G I + + A +K+ P +R+V I
Sbjct: 369 EQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII------- 421
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
+A K I + + K + K E I VPSS +
Sbjct: 422 ---------------TGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGR 466
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+IGK G T+ L++ T + + P+D +
Sbjct: 467 VIGKGGKTVNELQNLTSAEV-IVPRDQT 493
>gi|313240346|emb|CBY32688.1| unnamed protein product [Oikopleura dioica]
Length = 568
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 149/323 (46%), Gaps = 39/323 (12%)
Query: 300 VGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQA--SGAQIDVDDTKDNRDECVITV 357
GA S + +++L P + +G +IGKGG T++ I Q S A++DV + + V T+
Sbjct: 186 FGARGSPDTPLKMLVPASVVGAIIGKGGSTVRQITQLKDSRARVDVHRREGPGSDKVATI 245
Query: 358 TAIESPDDIKSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKR 417
+P+ + A+ +L+ +E D+ + +++L + +IG +IG+ G + ++ +
Sbjct: 246 YG--APE---ACGAAAIRILEIVRKEEKDNELPLKVLAHNALIGRLIGRDGRNLKHVQDK 300
Query: 418 TKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRD---DALKDRDGSRNP 474
T + IS + + D + + GEV + +A QI +LR D S P
Sbjct: 301 TGTRIAISSMHELSPYNM-DRTISIHGEVKGISEAEQQITEKLRQFETDMAAMSQQSLYP 359
Query: 475 PVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDS 534
+ + + M P L S P P Y+ +S Y + ++S
Sbjct: 360 GLNSQQM-------QMFPGLQS--PTAPPAYN-----------VSYQGSYFFKNVSQSVF 399
Query: 535 PYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS 594
G+ SS +++ T+ +L+P+ AVG +IG G+++ NI +I+GA+I + +
Sbjct: 400 FSGNSSSNNTQE--------TVTLLIPSGAVGAIIGSRGTHIRNISRIAGASIRIHVNAD 451
Query: 595 SRGDRVALISGTPEQKRAAENLI 617
I G PE + A+ I
Sbjct: 452 RDAKARVTIVGVPESQWKAQFCI 474
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 87/391 (22%), Positives = 159/391 (40%), Gaps = 67/391 (17%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQ--ETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVE 97
++L P V+G++IGK G + I Q ++RARV V D+V TIY
Sbjct: 197 KMLVPASVVGAIIGKGGSTVRQITQLKDSRARVDVHRREGPGSDKVATIY---------- 246
Query: 98 VDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEE----CQILVPSSQSAN 153
E AA +L++ RKE+++ ++L ++
Sbjct: 247 -----GAPEACGAAAIRILEI----------------VRKEEKDNELPLKVLAHNALIGR 285
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISA 213
+IG+ G +K ++ KT T I ++ P D + I GE + + +A I+
Sbjct: 286 LIGRDGRNLKHVQDKTGTRIAISSMHELSP-----YNMDRTISIHGEVKGISEAEQQITE 340
Query: 214 IMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARV 273
+ +F ET + S +YP GL + P P+ A V
Sbjct: 341 KLRQF--------ETDMAAM-------SQQSLYP--GLNSQQMQMFPGLQSPTAPPAYNV 383
Query: 274 PDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSI 333
Y + V+ +G S +S + + + +L P +G +IG G I++I
Sbjct: 384 SYQGSYFFKNVSQSVFFSGNS-------SSNNTQETVTLLIPSGAVGAIIGSRGTHIRNI 436
Query: 334 RQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKINDEDDDTVTIRL 393
+ +GA I + D + +T+ + + L + +E+ +T ++
Sbjct: 437 SRIAGASIRIHVNADRDAKARVTIVGVPESQWKAQFCIFDKLKQEGWFGNEEG-RLTTQI 495
Query: 394 LVSSKVIGCIIGKSGSIINEIRKRTKADVRI 424
+ K++G IIGK G + E+++ T ++V I
Sbjct: 496 TIPGKLVGRIIGKGGVNVRELQRITSSEVTI 526
>gi|332215029|ref|XP_003256639.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 2 [Nomascus leucogenys]
Length = 536
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 152/333 (45%), Gaps = 41/333 (12%)
Query: 301 GASQSEE--LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
G SQ+ + +R+L P +G +IGK G TIK+I + + +++D+ K+N VT
Sbjct: 122 GTSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHR-KENSGAAEKPVT 180
Query: 359 AIESPDDIKSMAVEAVLLLQTKINDEDD--DTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
+P+ S A +L + K DE + + +++L + ++G +IGK G + +I
Sbjct: 181 IHATPEGT-SEACRMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEH 239
Query: 417 RTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPV 476
T + IS + + + V G V + A ++I+ +LR+ A ++ + N
Sbjct: 240 ETGTKITISSLQDLSIYNP-ERTITVKGTVEACASAEIEIMKKLRE-AFENDMLAVNQQA 297
Query: 477 GADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPY 536
L+P + + LG +G+ +LS + + P+
Sbjct: 298 N---------------LIPGLN-LSALGI-----FSTGLSVLSPPAGPRGAPPAAPYHPF 336
Query: 537 GSMSSYSSKLY-----------GGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGA 585
+ S Y S LY P + + +P AVG +IGK G+++ + + +GA
Sbjct: 337 ATHSGYFSSLYPHHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGA 396
Query: 586 TIEMSDSKS-SRGDRVALISGTPEQKRAAENLI 617
+I+++ ++ +R+ +I+G PE + A+ I
Sbjct: 397 SIKIAPAEGPDVSERMVIITGPPEAQFKAQGRI 429
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 88/393 (22%), Positives = 153/393 (38%), Gaps = 91/393 (23%)
Query: 142 CQILVPSSQSANIIGKAGATIKRLRSKTRT-----------------SIKVTPKDASEPT 184
+ILVP+ IIGK G TIK + +T++ +I TP+ SE
Sbjct: 133 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTSE-- 190
Query: 185 HSCAMEFDNFVLISGESEAVKKA------LFAISAIMYKFSPREDIPLETTVREAPPSII 238
+C M + ++ E++ K A + A + ++ + +E L+ E I
Sbjct: 191 -ACRMILE---IMQKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKIT 246
Query: 239 IPS--DVPIYPPGGLYPNADPILPSRS----VPSILGAARVPDLQGYADTGNTWP----- 287
I S D+ IY P + S + L A D+ N P
Sbjct: 247 ISSLQDLSIYNPERTITVKGTVEACASAEIEIMKKLREAFENDMLAVNQQANLIPGLNLS 306
Query: 288 ---VYSTGLSLVS---------------------GLVGA--------------SQSEELV 309
++STGLS++S G + S E+ +
Sbjct: 307 ALGIFSTGLSVLSPPAGPRGAPPAAPYHPFATHSGYFSSLYPHHQFGPFPHHHSYPEQEI 366
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTK--DNRDECVITVTAIESPDDIK 367
+ + P +G +IGK G IK + + +GA I + + D + VI I P + +
Sbjct: 367 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVI----ITGPPEAQ 422
Query: 368 SMA---VEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRI 424
A + L + N +++ + + V S G +IGK G +NE++ T A+V +
Sbjct: 423 FKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEVIV 482
Query: 425 SKGDKPKCADANDE-LVEVVGEVGSVRDALVQI 456
+ P D N+E +V ++G + + A +I
Sbjct: 483 PRDQTP---DENEEVIVRIIGHFFASQTAQRKI 512
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 10/97 (10%)
Query: 138 EKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLI 197
E+E + +P+ IIGK GA IK+L SIK+ P + + + + V+I
Sbjct: 363 EQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVS-------ERMVII 415
Query: 198 SGESEAVKKALFAISAIMYK---FSPREDIPLETTVR 231
+G EA KA I + + F+P+E++ LE +R
Sbjct: 416 TGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIR 452
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 58/148 (39%), Gaps = 24/148 (16%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPF-PGAKDRVVTIYSHVKDK 93
E I + P +G++IGK G I + + A +K+ P +R+V I
Sbjct: 363 EQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII------- 415
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
+A K I + + K + K E I VPSS +
Sbjct: 416 ---------------TGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGR 460
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+IGK G T+ L++ T + + P+D +
Sbjct: 461 VIGKGGKTVNELQNLTSAEV-IVPRDQT 487
>gi|281354032|gb|EFB29616.1| hypothetical protein PANDA_003725 [Ailuropoda melanoleuca]
Length = 434
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 150/333 (45%), Gaps = 41/333 (12%)
Query: 301 GASQSEE--LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
G+SQ+ + +R+L P +G +IGK G TIK+I + + +++D+ K+N VT
Sbjct: 50 GSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHR-KENSGAAEKPVT 108
Query: 359 AIESPDDIKSMAVEAVLLLQTKINDEDD--DTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
+P+ S A +L + K DE + + +++L + ++G +IGK G + +I
Sbjct: 109 IHATPEGT-SEACRMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEH 167
Query: 417 RTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPV 476
T + IS + + + V G V + +A V+I+ +LR+ A ++ + N
Sbjct: 168 ETGTKITISSLQDLSIYNP-ERTITVKGTVEACANAEVEIMKKLRE-AFENDMLAVNQQA 225
Query: 477 GADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPY 536
L+P L +G+ +L + + P+
Sbjct: 226 N---------------LIPG------LNLSALGIFSTGLSVLPPPAGPRGAPPAPPYHPF 264
Query: 537 GSMSSYSSKLY-----------GGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGA 585
+ S Y S LY P + + +P AVG +IGK G+++ + + +GA
Sbjct: 265 ATHSGYFSSLYPPHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGA 324
Query: 586 TIEMSDSKS-SRGDRVALISGTPEQKRAAENLI 617
+I+++ ++ +R+ +I+G PE + A+ I
Sbjct: 325 SIKIAPAEGPDVSERMVIITGPPEAQFKAQGRI 357
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 87/386 (22%), Positives = 151/386 (39%), Gaps = 97/386 (25%)
Query: 142 CQILVPSSQSANIIGKAGATIKRLRSKTRT-----------------SIKVTPKDASEPT 184
+ILVP+ IIGK G TIK + +T++ +I TP+ SE
Sbjct: 61 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTSE-- 118
Query: 185 HSCAMEFDNFVLISGESEAVKKA------LFAISAIMYKFSPREDIPLETTVREAPPSII 238
+C M + ++ E++ K A + A + ++ + +E L+ E I
Sbjct: 119 -ACRMILE---IMQKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKIT 174
Query: 239 IPS--DVPIYPP-------GGLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTWP-- 287
I S D+ IY P G + A+ + + L A D+ N P
Sbjct: 175 ISSLQDLSIYNPERTITVKGTVEACANAEV---EIMKKLREAFENDMLAVNQQANLIPGL 231
Query: 288 ------VYSTGLSLV---------------------SGLVGA--------------SQSE 306
++STGLS++ SG + S E
Sbjct: 232 NLSALGIFSTGLSVLPPPAGPRGAPPAPPYHPFATHSGYFSSLYPPHQFGPFPHHHSYPE 291
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTK--DNRDECVITVTAIESPD 364
+ ++ + P +G +IGK G IK + + +GA I + + D + VI I P
Sbjct: 292 QEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVI----ITGPP 347
Query: 365 DIKSMA---VEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKAD 421
+ + A + L + N +++ + + V S G +IGK G +NE++ T A+
Sbjct: 348 EAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAE 407
Query: 422 VRISKGDKPKCADANDE-LVEVVGEV 446
V + + P D N+E +V ++G
Sbjct: 408 VIVPRDQTP---DENEEVIVRIIGHF 430
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 58/148 (39%), Gaps = 24/148 (16%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPF-PGAKDRVVTIYSHVKDK 93
E I + P +G++IGK G I + + A +K+ P +R+V I
Sbjct: 291 EQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII------- 343
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
+A K I + + K + K E I VPSS +
Sbjct: 344 ---------------TGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGR 388
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+IGK G T+ L++ T + + P+D +
Sbjct: 389 VIGKGGKTVNELQNLTSAEV-IVPRDQT 415
Score = 39.3 bits (90), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 63/138 (45%), Gaps = 24/138 (17%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKEDVEV 98
RIL P +G++IGK G I +I ++T++RV + GA ++ VTI++
Sbjct: 62 RILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHA---------- 111
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
E A +L++ A ++ K E+ +IL + +IGK
Sbjct: 112 -----TPEGTSEACRMILEIMQKEA--------DETKLAEEIPLKILAHNGLVGRLIGKE 158
Query: 159 GATIKRLRSKTRTSIKVT 176
G +K++ +T T I ++
Sbjct: 159 GRNLKKIEHETGTKITIS 176
>gi|345796405|ref|XP_535832.3| PREDICTED: insulin-like growth factor 2 mRNA binding protein 2
isoform 2 [Canis lupus familiaris]
Length = 531
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 154/333 (46%), Gaps = 41/333 (12%)
Query: 301 GASQSEEL--VIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
G+SQ+ ++ +R+L P +G +IGK G TIK+I + + +++D+ K+N VT
Sbjct: 117 GSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHR-KENSGAAEKPVT 175
Query: 359 AIESPDDIKSMAVEAVLLLQTKINDEDD--DTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
+P+ S A +L + K DE + + +++L + ++G +IGK G + +I
Sbjct: 176 IHATPEGT-SEACRMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEH 234
Query: 417 RTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPV 476
T + IS + + + V G V + +A V+I+ +LR+ A ++ + N
Sbjct: 235 ETGTKITISSLQDLSIYNP-ERTITVKGTVEACANAEVEIMKKLRE-AFENDMLAVNQQA 292
Query: 477 GADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPY 536
L+P + + LG +G+ +L + + P+
Sbjct: 293 N---------------LIPGLN-LSALGI-----FSTGLSVLPPPAGPRGAPPAPPYHPF 331
Query: 537 GSMSSYSSKLY-----------GGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGA 585
+ S Y S LY P + + +P AVG +IGK G+++ + + +GA
Sbjct: 332 ATHSGYFSSLYPPHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGA 391
Query: 586 TIEMSDSKS-SRGDRVALISGTPEQKRAAENLI 617
+I+++ ++ +R+ +I+G PE + A+ I
Sbjct: 392 SIKIAPAEGPDVSERMVIITGPPEAQFKAQGRI 424
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 89/396 (22%), Positives = 156/396 (39%), Gaps = 97/396 (24%)
Query: 142 CQILVPSSQSANIIGKAGATIKRLRSKTRT-----------------SIKVTPKDASEPT 184
+ILVP+ IIGK G TIK + +T++ +I TP+ SE
Sbjct: 128 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTSE-- 185
Query: 185 HSCAMEFDNFVLISGESEAVKKA------LFAISAIMYKFSPREDIPLETTVREAPPSII 238
+C M + ++ E++ K A + A + ++ + +E L+ E I
Sbjct: 186 -ACRMILE---IMQKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKIT 241
Query: 239 IPS--DVPIYPP-------GGLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTWP-- 287
I S D+ IY P G + A+ + + L A D+ N P
Sbjct: 242 ISSLQDLSIYNPERTITVKGTVEACANAEV---EIMKKLREAFENDMLAVNQQANLIPGL 298
Query: 288 ------VYSTGLSLV---------------------SGLVGA--------------SQSE 306
++STGLS++ SG + S E
Sbjct: 299 NLSALGIFSTGLSVLPPPAGPRGAPPAPPYHPFATHSGYFSSLYPPHQFGPFPHHHSYPE 358
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTK--DNRDECVITVTAIESPD 364
+ ++ + P +G +IGK G IK + + +GA I + + D + VI I P
Sbjct: 359 QEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVI----ITGPP 414
Query: 365 DIKSMA---VEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKAD 421
+ + A + L + N +++ + + V S G +IGK G +NE++ T A+
Sbjct: 415 EAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAE 474
Query: 422 VRISKGDKPKCADANDE-LVEVVGEVGSVRDALVQI 456
V + + P D N+E +V ++G + + A +I
Sbjct: 475 VIVPRDQTP---DENEEVIVRIIGHFFASQTAQRKI 507
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 58/148 (39%), Gaps = 24/148 (16%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPF-PGAKDRVVTIYSHVKDK 93
E I + P +G++IGK G I + + A +K+ P +R+V I
Sbjct: 358 EQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII------- 410
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
+A K I + + K + K E I VPSS +
Sbjct: 411 ---------------TGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGR 455
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+IGK G T+ L++ T + + P+D +
Sbjct: 456 VIGKGGKTVNELQNLTSAEV-IVPRDQT 482
Score = 38.9 bits (89), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 63/138 (45%), Gaps = 24/138 (17%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKEDVEV 98
RIL P +G++IGK G I +I ++T++RV + GA ++ VTI++
Sbjct: 129 RILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHA---------- 178
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
E A +L++ A ++ K E+ +IL + +IGK
Sbjct: 179 -----TPEGTSEACRMILEIMQKEA--------DETKLAEEIPLKILAHNGLVGRLIGKE 225
Query: 159 GATIKRLRSKTRTSIKVT 176
G +K++ +T T I ++
Sbjct: 226 GRNLKKIEHETGTKITIS 243
>gi|115482006|ref|NP_001064596.1| Os10g0414700 [Oryza sativa Japonica Group]
gi|78708635|gb|ABB47610.1| KH domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|113639205|dbj|BAF26510.1| Os10g0414700 [Oryza sativa Japonica Group]
gi|215693240|dbj|BAG88622.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222612825|gb|EEE50957.1| hypothetical protein OsJ_31513 [Oryza sativa Japonica Group]
Length = 586
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 81/159 (50%), Gaps = 6/159 (3%)
Query: 309 VIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKS 368
V R+L P K+G VIG G ++ + + + A + V E + + A E PD+ K
Sbjct: 60 VFRMLIPATKVGAVIGHSGERLRRLCEETKACVRVIGGHFAAAERAVIIFAKEQPDEPKP 119
Query: 369 MAVEAVL-LLQTKINDEDDDT-----VTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADV 422
A++A+L + + IND+ D V R+L S+ +IG GS+IN I+K +K ++
Sbjct: 120 PAIDALLRVYECIINDDGLDVRYNNIVVARILTPSEQAASLIGDQGSVINYIKKASKTNI 179
Query: 423 RISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLR 461
+ GD P A +D ++E+ G V AL + LR
Sbjct: 180 HVIDGDLPPVALEDDMIIEIWGLPARVHQALELVACHLR 218
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 101/203 (49%), Gaps = 25/203 (12%)
Query: 27 EKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTI 86
E + G + ++R+L P +G+VIG SG+ + + +ET+A V+V+ A +R V I
Sbjct: 49 ENRDPGWPGTSVFRMLIPATKVGAVIGHSGERLRRLCEETKACVRVIGGHFAAAERAVII 108
Query: 87 YSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDN--DKKRKEKEECQI 144
++ K++ D EP A DALL+V+ I N D+ D + +I
Sbjct: 109 FA--KEQPD----------EPKPPAIDALLRVYECIIN------DDGLDVRYNNIVVARI 150
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAV 204
L PS Q+A++IG G+ I ++ ++T+I V D A+E D + I G V
Sbjct: 151 LTPSEQAASLIGDQGSVINYIKKASKTNIHVIDGDLP----PVALEDDMIIEIWGLPARV 206
Query: 205 KKALFAISAIMYKF-SPREDIPL 226
+AL ++ + K+ R IPL
Sbjct: 207 HQALELVACHLRKYLVHRSVIPL 229
>gi|146197849|dbj|BAF57636.1| hnRNP K protein [Dugesia japonica]
Length = 337
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 149/338 (44%), Gaps = 53/338 (15%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTA-IESPDDIKS 368
+R L P G VIGK G I+++R+ A+I++ D E ++++ A +++ +I +
Sbjct: 22 LRFLIPSKAAGSVIGKSGENIRNLRRMFMARINISDNSG--PERILSLEADLDTILEILT 79
Query: 369 MAVE----AVLLLQTKINDEDD--DTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADV 422
+E + L + D +D + V +R+LV+ ++G +IG+ G IN++R+ K D+
Sbjct: 80 QCLEKMEGCIPLPRAGSGDCNDSINHVDLRMLVNQSLVGALIGRGGGRINDLRE--KCDL 137
Query: 423 RISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKD----RDGSRNPPVGA 478
R+ K + C D+ D +V++VG + V D + +I+ ++ +++ D A
Sbjct: 138 RVLKVYQTVCPDSTDRIVQLVGAIPLVIDCIGKIVDMCKETPVREPKVNYDAQNYDHAAA 197
Query: 479 DH--------------IYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLY 524
+H + + G S P L YD Y
Sbjct: 198 NHYGGWAQNAIRPNNNLTTRSLGFSRPGFLKHQASYKNEHYD-----------------Y 240
Query: 525 GYGSLSMGDSPYGSM-SSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKIS 583
Y + Y M +S+ + Y E+ +P VG +IG GS + +R S
Sbjct: 241 SY------PNNYREMDTSFRNSHYDEQDNNEVQEIRLPHKVVGAIIGPGGSRIQQVRMDS 294
Query: 584 GATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFI 621
GA I +S + +RV ISG + + A ++I +
Sbjct: 295 GAHITISSPDRNPQERVVTISGNTQDVKRAFSMINECL 332
Score = 42.4 bits (98), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 28/41 (68%)
Query: 552 PPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDS 592
P + L L+P+ A G VIGK+G N+ N+R++ A I +SD+
Sbjct: 18 PCIELRFLIPSKAAGSVIGKSGENIRNLRRMFMARINISDN 58
Score = 39.3 bits (90), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 24 RINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRV 83
R + DE+ N E + I P V+G++IG G I +R ++ A + + P ++RV
Sbjct: 254 RNSHYDEQDNNE--VQEIRLPHKVVGAIIGPGGSRIQQVRMDSGAHITISSPDRNPQERV 311
Query: 84 VTIYSHVKD 92
VTI + +D
Sbjct: 312 VTISGNTQD 320
>gi|25012807|gb|AAN71494.1| RE72930p [Drosophila melanogaster]
Length = 580
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 158/341 (46%), Gaps = 58/341 (17%)
Query: 298 GLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITV 357
G+ G + + +R+L +G +IG+ G TI++I Q S A++DV K+N ++
Sbjct: 75 GMPGPGRQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHR-KENVGSLEKSI 133
Query: 358 TAIESPDD--------IKSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGS 409
T +P++ ++ M EA+ + +++ E + + +++L + +IG IIGKSG+
Sbjct: 134 TIYGNPENCTNACKRILEVMQQEAISTNKGELSPECSE-ICLKILAHNNLIGRIIGKSGN 192
Query: 410 IINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRD 469
I I + T + +S + + + ++ V G + ++ A QI +LR D
Sbjct: 193 TIKRIMQDTDTKITVSSINDINSFNL-ERIITVKGLIENMSRAENQISTKLRQSYENDLQ 251
Query: 470 GSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSL 529
+ + + P + P+ + S G GM+ ++S+
Sbjct: 252 A-----IAPQSL-----------MFPGLHPMAMM-------STPGNGMVFNTSM------ 282
Query: 530 SMGDSPYGSMSSYS-SKLYGGLPPPL-------TLEVLVPANAVGKVIGKAGSNLANIRK 581
P+ S S++ SK + PP+ T + +P NAVG +IG GS++ +I +
Sbjct: 283 -----PFPSCQSFAMSKTPASVVPPVFPNDLQETTYLYIPNNAVGAIIGTRGSHIRSIMR 337
Query: 582 ISGATIEMSDSKS-----SRGDRVALISGTPEQKRAAENLI 617
S A+++++ + + +R I GTPE + A+ +I
Sbjct: 338 FSNASLKIAPLDADKPLDQQTERKVTIVGTPEGQWKAQYMI 378
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 105/459 (22%), Positives = 199/459 (43%), Gaps = 68/459 (14%)
Query: 12 RDNDRDGKNQKRRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVK 71
++ R +NQ+ G + RIL ++G++IG+ G I +I Q++RARV
Sbjct: 60 KNQRRSQRNQRNPYPGMPGPGRQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVD 119
Query: 72 VV-DPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANAT 130
V G+ ++ +TIY + ++ C +A ++ + +
Sbjct: 120 VHRKENVGSLEKSITIYGNPEN----------------CT--NACKRILEVMQQEAISTN 161
Query: 131 DNDKKRKEKEEC-QILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAM 189
+ + E C +IL ++ IIGK+G TIKR+ T T I V+ + +
Sbjct: 162 KGELSPECSEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITVSSINDIN-----SF 216
Query: 190 EFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPG 249
+ + + G E + +A IS K + L+ AP S++ P ++P
Sbjct: 217 NLERIITVKGLIENMSRAENQIST---KLRQSYENDLQAI---APQSLMFPG---LHPMA 267
Query: 250 GLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELV 309
+ + ++ + S+P P Q +A + T S+V + E
Sbjct: 268 MMSTPGNGMVFNTSMP-------FPSCQSFA-------MSKTPASVVPPVFPNDLQETTY 313
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQ-----IDVDDTKDNRDECVITVTAIESPD 364
+ + P N +G +IG G I+SI + S A +D D D + E +T+ + +P+
Sbjct: 314 LYI--PNNAVGAIIGTRGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTI--VGTPE 369
Query: 365 DIKSMAVEAVLLLQTKINDE------DDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRT 418
+A ++ K+ +E DD +T+ LLV+S +G IIGK G + E+++ T
Sbjct: 370 G----QWKAQYMIFEKMREEGFMCGTDDVRLTVELLVASSQVGRIIGKGGQNVRELQRVT 425
Query: 419 KADVRISKGDKPKCADANDEL-VEVVGEVGSVRDALVQI 456
+ +++ + + ++E V ++G SV+ A +I
Sbjct: 426 GSVIKLPEHALAPPSGGDEETPVHIIGLFYSVQSAQRRI 464
Score = 38.9 bits (89), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 30/38 (78%)
Query: 554 LTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSD 591
LT+E+LV ++ VG++IGK G N+ +++++G+ I++ +
Sbjct: 396 LTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIKLPE 433
>gi|358400710|gb|EHK50036.1| hypothetical protein TRIATDRAFT_51252 [Trichoderma atroviride IMI
206040]
Length = 477
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 162/359 (45%), Gaps = 62/359 (17%)
Query: 304 QSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESP 363
+S + IR + + +IGKGG + +IR+ S A+ V D + E ++TV+ I
Sbjct: 114 ESSWIHIRAVISSPEAATIIGKGGENVSNIRKMSNAKCTVSDYQKGAVERILTVSGI--- 170
Query: 364 DDIKSMAVEAVLLLQTKINDE--------DDDTVTIRLLVSSKVIGCIIGKSGSIINEIR 415
+ ++A L+++T +N+E T +RLL+ +IG IIGK GS I EI+
Sbjct: 171 --VDAVAKAFGLIIRT-LNNEPLSEASTASSKTYPLRLLIPHILIGSIIGKGGSRIREIQ 227
Query: 416 KRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPP 475
+ + A + S P ++ + LV V+G +V A + L + L +R G P
Sbjct: 228 EASGARLNASDSCLPMSSERS--LV-VMGVADAVHIATYYVGSTLLEQ-LNERFGG---P 280
Query: 476 VGADHIYSSGTGI-SMPPLLPSIP--PVGPLGYDQRADS--------------------- 511
+ + SG + S+P + +P P G+ RA++
Sbjct: 281 GASAYATRSGAPVGSIPGGMQVVPYSPQPASGHYGRAENYGRHQERRPHHMPPAPYPQPY 340
Query: 512 --GSGIGMLSSSSLYGYG--------------SLSMGDSPYGSMSSYSSKLYGGLP-PPL 554
G+ G + YG G ++ P + ++ G+P P+
Sbjct: 341 AHGAPHGAPAIPMQYGAGQPAAYGAAAPHVQPHMAPHTGPQAHGAPQGQPMHAGMPGGPI 400
Query: 555 TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAA 613
T ++ +P + VG +IGK G + IR++SG+ I++++ + + +R+ I+GT E R A
Sbjct: 401 TQQIYIPNDMVGAIIGKGGQKINEIRQMSGSVIKINEPQDNSNERLVTITGTEECNRMA 459
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 87/387 (22%), Positives = 164/387 (42%), Gaps = 95/387 (24%)
Query: 50 SVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFN------ 103
++IGK G+ +++IR+ + A+ V D GA +R++T+ S + D V F
Sbjct: 131 TIIGKGGENVSNIRKMSNAKCTVSDYQKGAVERILTV-SGIVDA----VAKAFGLIIRTL 185
Query: 104 DKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIK 163
+ EPL A A K + ++L+P +IIGK G+ I+
Sbjct: 186 NNEPLSEASTASSKTYP---------------------LRLLIPHILIGSIIGKGGSRIR 224
Query: 164 RLRSKTRTSIKVTPKDASEPTHSC-AMEFDNFVLISGESEAVKKALFAI-SAIMYKFSPR 221
++ + + +AS+ SC M + +++ G ++AV A + + S ++ + + R
Sbjct: 225 EIQEASGARL-----NASD---SCLPMSSERSLVVMGVADAVHIATYYVGSTLLEQLNER 276
Query: 222 EDIPLETT--VREAPPSIIIPSDVPI-----YPPGGLY---------------------- 252
P + R P IP + + P G Y
Sbjct: 277 FGGPGASAYATRSGAPVGSIPGGMQVVPYSPQPASGHYGRAENYGRHQERRPHHMPPAPY 336
Query: 253 --------PNADPILPSR---SVPSILGAARVPDLQGYA--DTGNTWPVYSTGLSLVSGL 299
P+ P +P + P+ GAA P +Q + TG G + +G+
Sbjct: 337 PQPYAHGAPHGAPAIPMQYGAGQPAAYGAA-APHVQPHMAPHTGPQAHGAPQGQPMHAGM 395
Query: 300 VGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTA 359
G ++++ I P + +G +IGKGG I IRQ SG+ I +++ +DN +E ++T+T
Sbjct: 396 PGGPITQQIYI----PNDMVGAIIGKGGQKINEIRQMSGSVIKINEPQDNSNERLVTITG 451
Query: 360 IESPDDIKSMAVEAVLLLQTKINDEDD 386
E + + A+ +L +++ + +
Sbjct: 452 TEECNRM------ALYMLYSRLGETQN 472
Score = 42.4 bits (98), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 34/50 (68%)
Query: 37 VIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTI 86
+ +I P+ ++G++IGK G+ IN IRQ + + +K+ +P + +R+VTI
Sbjct: 400 ITQQIYIPNDMVGAIIGKGGQKINEIRQMSGSVIKINEPQDNSNERLVTI 449
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 43/72 (59%), Gaps = 4/72 (5%)
Query: 389 VTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGS 448
+T ++ + + ++G IIGK G INEIR+ + + ++I ++P+ ++N+ LV + G
Sbjct: 400 ITQQIYIPNDMVGAIIGKGGQKINEIRQMSGSVIKI---NEPQ-DNSNERLVTITGTEEC 455
Query: 449 VRDALVQIILRL 460
R AL + RL
Sbjct: 456 NRMALYMLYSRL 467
>gi|410900025|ref|XP_003963497.1| PREDICTED: poly(rC)-binding protein 2-like [Takifugu rubripes]
Length = 318
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 152/332 (45%), Gaps = 37/332 (11%)
Query: 297 SGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVIT 356
S LV + L IR+L ++G +IGK G ++K +R+ SGA+I++ + N E +IT
Sbjct: 3 SSLVEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIIT 60
Query: 357 VTA-IESPDDIKSMAVEAVLL-LQTKINDEDDDT---VTIRLLVSSKVIGCIIGKSGSII 411
+ S SM +E + + T + + + VTIRL+V + G +IGK G I
Sbjct: 61 LAGPTTSIFKAFSMIIEKLEEDISTSMTNSTATSKPPVTIRLVVPASQCGSLIGKGGCKI 120
Query: 412 NEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGS 471
EIR+ A V+++ P ++ + + + G S+ + + QI + + + K
Sbjct: 121 KEIRESAGAQVQVAGDMLP---NSTERAITIAGTPQSIIECVKQICVVMLESPPKGVTIP 177
Query: 472 RNP-PVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLS 530
P P G+ I++ G +A + G + L L+
Sbjct: 178 YRPKPSGSPVIFAGG----------------------QAYAVQGQHAIPQPDLTKLHQLA 215
Query: 531 MGDSPYGSMSSYSSKLYGGLPPPL---TLEVLVPANAVGKVIGKAGSNLANIRKISGATI 587
M SP+ ++ + G+ + E+ +P + +G +IG+ G+ + IR++SGA I
Sbjct: 216 MQQSPF-PIAHSNQGFQAGMDASAQTGSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQI 274
Query: 588 EMSDSKSSRGDRVALISGTPEQKRAAENLIQA 619
++++ DR I+G+ AE LI A
Sbjct: 275 KIANPVEGSTDRQVTITGSHASISLAEYLINA 306
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 144/334 (43%), Gaps = 54/334 (16%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH 89
E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R++T+
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAG- 63
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSS 149
+ F+ + K+ I+ ++ N+T K +++VP+S
Sbjct: 64 ----PTTSIFKAFSM---------IIEKLEEDISTSMTNSTATSKP---PVTIRLVVPAS 107
Query: 150 QSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALF 209
Q ++IGK G IK +R ++V T + + I+G +++ + +
Sbjct: 108 QCGSLIGKGGCKIKEIRESAGAQVQVAGDMLPNST-------ERAITIAGTPQSIIECVK 160
Query: 210 AISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILG 269
I +M + P+ T+ P PS P+ GG A + ++P
Sbjct: 161 QICVVMLESPPKG-----VTIPYRPK----PSGSPVIFAGG---QAYAVQGQHAIPQ--- 205
Query: 270 AARVPDL---QGYADTGNTWPVYSTGLSLVSGLVGASQ--SEELVIRVLCPFNKIGRVIG 324
PDL A + +P+ + +G+ ++Q S EL I P + IG +IG
Sbjct: 206 ----PDLTKLHQLAMQQSPFPIAHSNQGFQAGMDASAQTGSHELTI----PNDLIGCIIG 257
Query: 325 KGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
+ G I IRQ SGAQI + + + + +T+T
Sbjct: 258 RQGAKINEIRQMSGAQIKIANPVEGSTDRQVTIT 291
>gi|348502908|ref|XP_003439009.1| PREDICTED: poly(rC)-binding protein 2-like [Oreochromis niloticus]
Length = 324
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 156/332 (46%), Gaps = 31/332 (9%)
Query: 297 SGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVIT 356
S LV + L IR+L ++G +IGK G ++K +R+ SGA+I++ + N E +IT
Sbjct: 3 SSLVEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIIT 60
Query: 357 VTA-IESPDDIKSMAVEAVLL-LQTKINDEDDDT---VTIRLLVSSKVIGCIIGKSGSII 411
+ S SM +E + + T + + + VT+RL+V + G +IGK G I
Sbjct: 61 LAGPTTSIFKAFSMIIEKLEEDISTSMTNSTATSKPPVTMRLVVPASQCGSLIGKGGCKI 120
Query: 412 NEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGS 471
EIR+ A V+++ P ++ + + V G S+ + + QI + + + K
Sbjct: 121 KEIRESAGAQVQVAGDMLP---NSTERAITVAGTPQSIIECVKQICIVMLESPPKGVTIP 177
Query: 472 RNP-PVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLS 530
P P G+ I++ G ++ +IP + D G SL L+
Sbjct: 178 YRPKPSGSPVIFAGGQAYAVQGQH-AIP---------QPDVSEG------PSLTKLHQLA 221
Query: 531 MGDSPYGSMSSYSSKLYGGLPPPL---TLEVLVPANAVGKVIGKAGSNLANIRKISGATI 587
M SP+ ++ + G+ + E+ +P + +G +IG+ G+ + IR++SGA I
Sbjct: 222 MQQSPF-PIAHSNQGFQAGMDASAQTGSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQI 280
Query: 588 EMSDSKSSRGDRVALISGTPEQKRAAENLIQA 619
++++ DR I+G+ AE LI A
Sbjct: 281 KIANPVEGSTDRQVTITGSHASISLAEYLINA 312
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 74/333 (22%), Positives = 144/333 (43%), Gaps = 46/333 (13%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH 89
E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R++T+
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLAG- 63
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSS 149
+ F+ + K+ I+ ++ N+T K +++VP+S
Sbjct: 64 ----PTTSIFKAFS---------MIIEKLEEDISTSMTNSTATSKP---PVTMRLVVPAS 107
Query: 150 QSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALF 209
Q ++IGK G IK +R ++V T + + ++G +++ + +
Sbjct: 108 QCGSLIGKGGCKIKEIRESAGAQVQVAGDMLPNST-------ERAITVAGTPQSIIECVK 160
Query: 210 AISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPS--I 267
I +M + P+ T+ P PS P+ GG A + ++P +
Sbjct: 161 QICIVMLESPPK-----GVTIPYRPK----PSGSPVIFAGG---QAYAVQGQHAIPQPDV 208
Query: 268 LGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQ--SEELVIRVLCPFNKIGRVIGK 325
+ L A + +P+ + +G+ ++Q S EL I P + IG +IG+
Sbjct: 209 SEGPSLTKLHQLAMQQSPFPIAHSNQGFQAGMDASAQTGSHELTI----PNDLIGCIIGR 264
Query: 326 GGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
G I IRQ SGAQI + + + + +T+T
Sbjct: 265 QGAKINEIRQMSGAQIKIANPVEGSTDRQVTIT 297
>gi|357615456|gb|EHJ69667.1| putative igf2 mRNA binding protein [Danaus plexippus]
Length = 599
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 138/319 (43%), Gaps = 46/319 (14%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSM 369
+R+L + +G +IG+ G TI+ I Q S A++DV KDN +T +PD+ +
Sbjct: 141 LRLLVQSDMVGAIIGRQGSTIRLITQQSRARVDVH-RKDNVGSLEKAITIYGNPDNCTNA 199
Query: 370 AVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDK 429
+ ++Q + N+ + + +++L + +IG IIGK G+ I I + T + +S +
Sbjct: 200 CKRILEVMQQEANNTNKGEICLKILAHNNLIGRIIGKGGNTIKRIMQETDTKITVSSIND 259
Query: 430 PKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSGTGIS 489
+ + ++ V G + ++ A QI +LR Y + +
Sbjct: 260 INSFNL-ERIITVKGTIENMAKAESQISAKLRQS------------------YENDLQVL 300
Query: 490 MPP--LLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLY 547
P + P + P + M+S+ + Y ++
Sbjct: 301 APQSIMFPGLHP---------------MAMMSTGRGFCGAPPPFPPPIYAPLAGQGGAQQ 345
Query: 548 GGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMS---------DSKSSRGD 598
G T + +P NAVG +IG GS++ NI + S A+++++ S +++ +
Sbjct: 346 GAGDSQETTYLYIPNNAVGAIIGTKGSHIRNIIRFSNASVKIAPLEQDKVIEGSVAAQQE 405
Query: 599 RVALISGTPEQKRAAENLI 617
R I G+PE + A+ LI
Sbjct: 406 RKVTIVGSPEAQWKAQYLI 424
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 109/434 (25%), Positives = 186/434 (42%), Gaps = 91/434 (20%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDP-FPGAKDRVVTIYSHVKDKEDVEV 98
R+L ++G++IG+ G I I Q++RARV V G+ ++ +TIY
Sbjct: 142 RLLVQSDMVGAIIGRQGSTIRLITQQSRARVDVHRKDNVGSLEKAITIYG---------- 191
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEEC-QILVPSSQSANIIGK 157
+ + A +L+V AN + E C +IL ++ IIGK
Sbjct: 192 -----NPDNCTNACKRILEVMQQEAN----------NTNKGEICLKILAHNNLIGRIIGK 236
Query: 158 AGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYK 217
G TIKR+ +T T I V+ + + + + + G E + KA ISA + +
Sbjct: 237 GGNTIKRIMQETDTKITVSSINDIN-----SFNLERIITVKGTIENMAKAESQISAKLRQ 291
Query: 218 FSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQ 277
S D+ + AP SI+ P GL+P A ++ R
Sbjct: 292 -SYENDLQVL-----APQSIMFP---------GLHPMA-----------MMSTGR----- 320
Query: 278 GY--ADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQ 335
G+ A P+Y+ GA S+E + P N +G +IG G I++I +
Sbjct: 321 GFCGAPPPFPPPIYAPLAGQGGAQQGAGDSQE-TTYLYIPNNAVGAIIGTKGSHIRNIIR 379
Query: 336 ASGAQIDVDDTKDNRDECVIT----------VTAIESPDDIKSMAVEAVLLLQTKINDE- 384
S A + + + ++ VI VT + SP+ +A L+ K+ +E
Sbjct: 380 FSNASVKIAPLEQDK---VIEGSVAAQQERKVTIVGSPE----AQWKAQYLIFEKMREEG 432
Query: 385 -----DDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDE- 438
DD +T+ ++V+S +G IIGK G + E+++ T + +++ + +P A ND
Sbjct: 433 FMSGSDDVRLTVAIVVASSQVGRIIGKGGQNVRELQRVTGSLIKLPEQPQPPTAAGNDHE 492
Query: 439 -LVEVVGEVGSVRD 451
V +VG SV++
Sbjct: 493 TTVHIVGHFYSVQE 506
>gi|109042328|ref|XP_001095336.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 5 [Macaca mulatta]
gi|402860699|ref|XP_003894760.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 1 [Papio anubis]
Length = 599
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 152/333 (45%), Gaps = 41/333 (12%)
Query: 301 GASQSEE--LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
G SQ+ + +R+L P +G +IGK G TIK+I + + +++D+ K+N VT
Sbjct: 185 GTSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHR-KENSGAAEKPVT 243
Query: 359 AIESPDDIKSMAVEAVLLLQTKINDEDD--DTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
+P+ S A +L + K DE + + +++L + ++G +IGK G + +I
Sbjct: 244 IHATPEGT-SEACRMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEH 302
Query: 417 RTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPV 476
T + IS + + + V G V + A ++I+ +LR+ A ++ + N
Sbjct: 303 ETGTKITISSLQDLSIYNP-ERTITVKGTVEACASAEIEIMKKLRE-AFENDMLAVNQQA 360
Query: 477 GADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPY 536
L+P + + LG +G+ +LS + + P+
Sbjct: 361 N---------------LIPGLN-LSALGI-----FSTGLSVLSPPAGPRGAPPAAPYHPF 399
Query: 537 GSMSSYSSKLY-----------GGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGA 585
+ S Y S LY P + + +P AVG +IGK G+++ + + +GA
Sbjct: 400 ATHSGYFSSLYPHHQFGPFPHHHSYPEQEVVNLFIPTQAVGAIIGKKGAHIKQLARFAGA 459
Query: 586 TIEMSDSKS-SRGDRVALISGTPEQKRAAENLI 617
+I+++ ++ +R+ +I+G PE + A+ I
Sbjct: 460 SIKIAPAEGPDVSERMVIITGPPEAQFKAQGRI 492
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 89/393 (22%), Positives = 153/393 (38%), Gaps = 91/393 (23%)
Query: 142 CQILVPSSQSANIIGKAGATIKRLRSKTRT-----------------SIKVTPKDASEPT 184
+ILVP+ IIGK G TIK + +T++ +I TP+ SE
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTSE-- 253
Query: 185 HSCAMEFDNFVLISGESEAVKKA------LFAISAIMYKFSPREDIPLETTVREAPPSII 238
+C M + ++ E++ K A + A + ++ + +E L+ E I
Sbjct: 254 -ACRMILE---IMQKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKIT 309
Query: 239 IPS--DVPIYPPGGLYPNADPILPSRS----VPSILGAARVPDLQGYADTGNTWP----- 287
I S D+ IY P + S + L A D+ N P
Sbjct: 310 ISSLQDLSIYNPERTITVKGTVEACASAEIEIMKKLREAFENDMLAVNQQANLIPGLNLS 369
Query: 288 ---VYSTGLSLVS---------------------GLVGA--------------SQSEELV 309
++STGLS++S G + S E+ V
Sbjct: 370 ALGIFSTGLSVLSPPAGPRGAPPAAPYHPFATHSGYFSSLYPHHQFGPFPHHHSYPEQEV 429
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTK--DNRDECVITVTAIESPDDIK 367
+ + P +G +IGK G IK + + +GA I + + D + VI I P + +
Sbjct: 430 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVI----ITGPPEAQ 485
Query: 368 SMA---VEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRI 424
A + L + N +++ + + V S G +IGK G +NE++ T A+V +
Sbjct: 486 FKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEVIV 545
Query: 425 SKGDKPKCADANDE-LVEVVGEVGSVRDALVQI 456
+ P D N+E +V ++G + + A +I
Sbjct: 546 PRDQTP---DENEEVIVRIIGHFFASQTAQRKI 575
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 10/97 (10%)
Query: 138 EKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLI 197
E+E + +P+ IIGK GA IK+L SIK+ P + + + + V+I
Sbjct: 426 EQEVVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVS-------ERMVII 478
Query: 198 SGESEAVKKALFAISAIMYK---FSPREDIPLETTVR 231
+G EA KA I + + F+P+E++ LE +R
Sbjct: 479 TGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIR 515
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 58/148 (39%), Gaps = 24/148 (16%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPF-PGAKDRVVTIYSHVKDK 93
E + + P +G++IGK G I + + A +K+ P +R+V I
Sbjct: 426 EQEVVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII------- 478
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
+A K I + + K + K E I VPSS +
Sbjct: 479 ---------------TGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGR 523
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+IGK G T+ L++ T + + P+D +
Sbjct: 524 VIGKGGKTVNELQNLTSAEV-IVPRDQT 550
>gi|417399108|gb|JAA46584.1| Putative polyc-binding alphacp-1 [Desmodus rotundus]
Length = 333
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 160/343 (46%), Gaps = 43/343 (12%)
Query: 297 SGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVIT 356
+G++ + L IR+L ++G +IGK G ++K +R+ SGA+I++ + N E +IT
Sbjct: 3 TGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIIT 60
Query: 357 VTAIESPDDIKSMAVEAVL-LLQTKINDEDDDT-------VTIRLLVSSKVIGCIIGKSG 408
+ P + A ++ L+ I+ ++ VT+RL+V + G +IGK G
Sbjct: 61 LAG---PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGG 117
Query: 409 SIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDR 468
I EIR+ T A V+++ P ++ + + + G S+ + + QI + + +
Sbjct: 118 CKIKEIRESTGAQVQVAGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLETL---- 170
Query: 469 DGSRNPPVGADHIYSSGTGISMPPLLPSIPPV---GPLGYD---QRADSGSGIGMLSSSS 522
S++PP G Y PS PV G Y Q A + L +
Sbjct: 171 --SQSPPKGVTIPYRPK---------PSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLA 219
Query: 523 LY-GYGSLSMGDSPYGSMSSYSSKLYGGLP-----PPLTLEVLVPANAVGKVIGKAGSNL 576
+ + ++ G++ + + S S ++ G T E+ +P N +G +IG+ G+N+
Sbjct: 220 MQQSHFPMTHGNTGFSGIESSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQGANI 279
Query: 577 ANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQA 619
IR++SGA I++++ R I+G+ A+ LI A
Sbjct: 280 NEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLINA 322
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 148/354 (41%), Gaps = 78/354 (22%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH 89
E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R++T
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIIT---- 60
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAV-----ANATDNDKKRKEKEECQI 144
L +A+ K A I + + ++ T++ + ++
Sbjct: 61 ------------------LAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRL 102
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAV 204
+VP+SQ ++IGK G IK +R T ++V T + + I+G +++
Sbjct: 103 VVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNST-------ERAITIAGIPQSI 155
Query: 205 KKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADP-ILPSRS 263
+ + I +M LET + P + IP Y P P++ P I
Sbjct: 156 IECVKQICVVM----------LETLSQSPPKGVTIP-----YRP---KPSSSPVIFAGGQ 197
Query: 264 VPSILGAARVPD-----LQGYADTGNTWPVY--STGLSLV-----------SGLVGASQS 305
+I G +P L A + +P+ +TG S + + L ++Q+
Sbjct: 198 AYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWASLDASTQT 257
Query: 306 -EELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
EL I P N IG +IG+ G I IRQ SGAQI + + + +T+T
Sbjct: 258 THELTI----PNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTIT 307
>gi|196009850|ref|XP_002114790.1| hypothetical protein TRIADDRAFT_28388 [Trichoplax adhaerens]
gi|190582852|gb|EDV22924.1| hypothetical protein TRIADDRAFT_28388 [Trichoplax adhaerens]
Length = 360
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 154/339 (45%), Gaps = 32/339 (9%)
Query: 303 SQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDV---DDTKDNRDECVITVT- 358
S +++V+++L P G +IGKGG I ++ S +I + +DT E VI +T
Sbjct: 17 SSGDKVVLKLLIPNYAAGSIIGKGGDVINDLQNDSKTRIRLSHNNDTFPGTKERVIVITG 76
Query: 359 AIESPDDIKSMAVEAV-------LLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSII 411
+I + +E V +Q + D++ + ++++V + G IIGK GS I
Sbjct: 77 SIAGVRQVNRFILEKVSEEGKADKAIQYGVLDKNRNR-QLKMIVPNAAAGVIIGKGGSNI 135
Query: 412 NEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGS 471
EI+ ++ A V++S+ D + ++ V GE A II + L+D +
Sbjct: 136 KEIQDKSGAHVQVSQKKAQYAID--ERILTVTGEFNERLTAWELIIWK----CLEDINNL 189
Query: 472 RNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSM 531
N V H+ +GT P L S G D+ DS + +S Y ++
Sbjct: 190 PNTSVSYSHVEPAGT----LPALHSNYYGGGNANDRPMDSSAASYDPYTSERYSPTQVTQ 245
Query: 532 ---GDSPYGSMSSYSSKLYGGLPPPL---TLEVLVPANAVGKVIGKAGSNLANIRKISGA 585
D YG M SY P +++ VP + +G ++GK G +++I+ ISGA
Sbjct: 246 DAQADRQYG-MQSYPPTARNNRPSSYGETVIKIPVPDSIIGAILGKRGKVISDIQNISGA 304
Query: 586 TIEMS---DSKSSRGDRVALISGTPEQKRAAENLIQAFI 621
I++S D DR ++GT + A+ LI+ ++
Sbjct: 305 HIQVSQRGDYIPGTKDREVTVTGTNDAAHYADKLIKGYL 343
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 89/350 (25%), Positives = 149/350 (42%), Gaps = 64/350 (18%)
Query: 21 QKRRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV---DPFP 77
Q+R + + + V+ ++L P+ GS+IGK G VIN ++ +++ R+++ D FP
Sbjct: 6 QRRHTEIIKDNSSGDKVVLKLLIPNYAAGSIIGKGGDVINDLQNDSKTRIRLSHNNDTFP 65
Query: 78 GAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRK 137
G K+RV+ I + V + F + K AI V DK R
Sbjct: 66 GTKERVIVITGSIAGVRQV---NRF-----ILEKVSEEGKADKAIQYGVL-----DKNR- 111
Query: 138 EKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLI 197
+ +++VP++ + IIGK G+ IK ++ K+ ++V+ K A A++ + + +
Sbjct: 112 -NRQLKMIVPNAAAGVIIGKGGSNIKEIQDKSGAHVQVSQKKA-----QYAID-ERILTV 164
Query: 198 SGESEAVKKALFAISAIMYK-FSPREDIP-LETTVREAPPSIIIPSDVPIYPPGGLYPNA 255
+GE + L A I++K ++P + P+ +P+ Y GG NA
Sbjct: 165 TGE---FNERLTAWELIIWKCLEDINNLPNTSVSYSHVEPAGTLPALHSNYYGGG---NA 218
Query: 256 ------------DPILPSRSVPSIL----GAARVPDLQGYADTG-NTWPVYSTGLSLVSG 298
DP R P+ + A R +Q Y T N P
Sbjct: 219 NDRPMDSSAASYDPYTSERYSPTQVTQDAQADRQYGMQSYPPTARNNRP----------- 267
Query: 299 LVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD 348
S E VI++ P + IG ++GK G I I+ SGA I V D
Sbjct: 268 ----SSYGETVIKIPVPDSIIGAILGKRGKVISDIQNISGAHIQVSQRGD 313
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 41/67 (61%), Gaps = 9/67 (13%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV---DPFPGAKDRVVTIY---- 87
E+VI +I PD +IG+++GK GKVI+ I+ + A ++V D PG KDR VT+
Sbjct: 272 ETVI-KIPVPDSIIGAILGKRGKVISDIQNISGAHIQVSQRGDYIPGTKDREVTVTGTND 330
Query: 88 -SHVKDK 93
+H DK
Sbjct: 331 AAHYADK 337
>gi|301759723|ref|XP_002915742.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 1 [Ailuropoda melanoleuca]
Length = 599
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 150/333 (45%), Gaps = 41/333 (12%)
Query: 301 GASQSEE--LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
G+SQ+ + +R+L P +G +IGK G TIK+I + + +++D+ K+N VT
Sbjct: 185 GSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIH-RKENSGAAEKPVT 243
Query: 359 AIESPDDIKSMAVEAVLLLQTKINDEDD--DTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
+P+ S A +L + K DE + + +++L + ++G +IGK G + +I
Sbjct: 244 IHATPEGT-SEACRMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEH 302
Query: 417 RTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPV 476
T + IS + + + V G V + +A V+I+ +LR+ N +
Sbjct: 303 ETGTKITISSLQDLSIYNP-ERTITVKGTVEACANAEVEIMKKLRE-------AFENDML 354
Query: 477 GADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPY 536
+ + G+++ L +G+ +L + + P+
Sbjct: 355 AVNQQANLIPGLNLSAL---------------GIFSTGLSVLPPPAGPRGAPPAPPYHPF 399
Query: 537 GSMSSYSSKLY-----------GGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGA 585
+ S Y S LY P + + +P AVG +IGK G+++ + + +GA
Sbjct: 400 ATHSGYFSSLYPPHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGA 459
Query: 586 TIEMSDSKS-SRGDRVALISGTPEQKRAAENLI 617
+I+++ ++ +R+ +I+G PE + A+ I
Sbjct: 460 SIKIAPAEGPDVSERMVIITGPPEAQFKAQGRI 492
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 89/396 (22%), Positives = 156/396 (39%), Gaps = 97/396 (24%)
Query: 142 CQILVPSSQSANIIGKAGATIKRLRSKTRT-----------------SIKVTPKDASEPT 184
+ILVP+ IIGK G TIK + +T++ +I TP+ SE
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTSE-- 253
Query: 185 HSCAMEFDNFVLISGESEAVKKA------LFAISAIMYKFSPREDIPLETTVREAPPSII 238
+C M + ++ E++ K A + A + ++ + +E L+ E I
Sbjct: 254 -ACRMILE---IMQKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKIT 309
Query: 239 IPS--DVPIYPP-------GGLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTWP-- 287
I S D+ IY P G + A+ + + L A D+ N P
Sbjct: 310 ISSLQDLSIYNPERTITVKGTVEACANAEV---EIMKKLREAFENDMLAVNQQANLIPGL 366
Query: 288 ------VYSTGLSLV---------------------SGLVGA--------------SQSE 306
++STGLS++ SG + S E
Sbjct: 367 NLSALGIFSTGLSVLPPPAGPRGAPPAPPYHPFATHSGYFSSLYPPHQFGPFPHHHSYPE 426
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTK--DNRDECVITVTAIESPD 364
+ ++ + P +G +IGK G IK + + +GA I + + D + VI I P
Sbjct: 427 QEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVI----ITGPP 482
Query: 365 DIKSMA---VEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKAD 421
+ + A + L + N +++ + + V S G +IGK G +NE++ T A+
Sbjct: 483 EAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAE 542
Query: 422 VRISKGDKPKCADANDE-LVEVVGEVGSVRDALVQI 456
V + + P D N+E +V ++G + + A +I
Sbjct: 543 VIVPRDQTP---DENEEVIVRIIGHFFASQTAQRKI 575
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 58/148 (39%), Gaps = 24/148 (16%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPF-PGAKDRVVTIYSHVKDK 93
E I + P +G++IGK G I + + A +K+ P +R+V I
Sbjct: 426 EQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII------- 478
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
+A K I + + K + K E I VPSS +
Sbjct: 479 ---------------TGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGR 523
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+IGK G T+ L++ T + + P+D +
Sbjct: 524 VIGKGGKTVNELQNLTSAEV-IVPRDQT 550
Score = 39.3 bits (90), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 63/138 (45%), Gaps = 24/138 (17%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKEDVEV 98
RIL P +G++IGK G I +I ++T++RV + GA ++ VTI++
Sbjct: 197 RILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHA---------- 246
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
E A +L++ A ++ K E+ +IL + +IGK
Sbjct: 247 -----TPEGTSEACRMILEIMQKEA--------DETKLAEEIPLKILAHNGLVGRLIGKE 293
Query: 159 GATIKRLRSKTRTSIKVT 176
G +K++ +T T I ++
Sbjct: 294 GRNLKKIEHETGTKITIS 311
>gi|126345445|ref|XP_001362564.1| PREDICTED: poly(rC)-binding protein 2-like isoform 2 [Monodelphis
domestica]
Length = 338
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 162/349 (46%), Gaps = 44/349 (12%)
Query: 297 SGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVIT 356
+G++ + L IR+L ++G +IGK G ++K +R+ SGA+I++ + N E +IT
Sbjct: 3 TGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIIT 60
Query: 357 VTAIESPDDIKSMAVEAVL-LLQTKINDEDDDT-------VTIRLLVSSKVIGCIIGKSG 408
+ P + A ++ L+ I+ ++ VT+RL+V + G +IGK G
Sbjct: 61 LAG---PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGG 117
Query: 409 SIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKD- 467
I EIR+ T A V+++ P ++ + + + G S+ + + QI + + + K
Sbjct: 118 CKIKEIRESTGAQVQVAGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLESPPKGV 174
Query: 468 ----RDGSRNPPV---GADHIYSSGT-GISMPPLLPSI--------PPVGPLGYDQRADS 511
R + PV G YS+G+ S P PS+ PP+ A +
Sbjct: 175 TIPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPL-------EAYT 227
Query: 512 GSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGL---PPPLTLEVLVPANAVGKV 568
G + L L+M S + M+ ++ GL + E+ +P + +G +
Sbjct: 228 IQGQYAIPQPDLTKLHQLAMQQSHF-PMTHGNTGFSAGLDASAQTTSHELTIPNDLIGCI 286
Query: 569 IGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLI 617
IG+ G+ + IR++SGA I++++ DR I+G+ A+ LI
Sbjct: 287 IGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLI 335
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 81/360 (22%), Positives = 148/360 (41%), Gaps = 75/360 (20%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH 89
E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R++T
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIIT---- 60
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAV-----ANATDNDKKRKEKEECQI 144
L +A+ K A I + + ++ T++ + ++
Sbjct: 61 ------------------LAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRL 102
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAV 204
+VP+SQ ++IGK G IK +R T ++V T + + I+G +++
Sbjct: 103 VVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNST-------ERAITIAGIPQSI 155
Query: 205 KKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGL-----------YP 253
+ + I +M + P+ T+ P PS P+ GG +P
Sbjct: 156 IECVKQICVVMLESPPK-----GVTIPYRPK----PSSSPVIFAGGQDRYSTGSDSASFP 206
Query: 254 NADPIL--------PSRSVPSILGAARVPD-----LQGYADTGNTWPVYSTGLSLVSGLV 300
+ P + P +I G +P L A + +P+ +GL
Sbjct: 207 HTTPSMCLNPDLEGPPLEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSAGLD 266
Query: 301 GASQ--SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
++Q S EL I P + IG +IG+ G I IRQ SGAQI + + + + +T+T
Sbjct: 267 ASAQTTSHELTI----PNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTIT 322
>gi|147817258|emb|CAN62067.1| hypothetical protein VITISV_030085 [Vitis vinifera]
Length = 288
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 86/187 (45%), Gaps = 47/187 (25%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTA------- 359
+++ R+LCP K G VIGKGG I+ R+ +GA+I +DD+ DE VI + A
Sbjct: 99 QVLFRILCPATKTGGVIGKGGAIIRQFREDTGAKIRIDDSVLGCDERVILIVADAVKSKR 158
Query: 360 --------------------------IESPDDIKSMAVEAVLLLQTKI------------ 381
+ DD S A +A++ + +I
Sbjct: 159 EASAICGAEANDGEESANLRNSSPNPVAVDDDESSPAQQALVRVFERILKVDEEREEKEK 218
Query: 382 -NDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDK-PKCADANDEL 439
D + V RLL S +GC++G+ G I+ +IR+ + A +R+ D P CA DEL
Sbjct: 219 KEDLGNVAVCCRLLAPSNQVGCVLGRGGKIVEKIRQESGAQIRVLPKDHIPACASPGDEL 278
Query: 440 VEVVGEV 446
++VV ++
Sbjct: 279 IQVVHKL 285
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 81/167 (48%), Gaps = 24/167 (14%)
Query: 37 VIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYS-HVKDKED 95
V++RILCP G VIGK G +I R++T A++++ D G +RV+ I + VK K +
Sbjct: 100 VLFRILCPATKTGGVIGKGGAIIRQFREDTGAKIRIDDSVLGCDERVILIVADAVKSKRE 159
Query: 96 VE--VDDEFNDKE-----------PLCA-------AQDALLKVHAAIANAVANATDNDKK 135
E ND E P+ AQ AL++V I + +KK
Sbjct: 160 ASAICGAEANDGEESANLRNSSPNPVAVDDDESSPAQQALVRVFERILKVDEEREEKEKK 219
Query: 136 RKEKEE---CQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKD 179
C++L PS+Q ++G+ G ++++R ++ I+V PKD
Sbjct: 220 EDLGNVAVCCRLLAPSNQVGCVLGRGGKIVEKIRQESGAQIRVLPKD 266
Score = 39.3 bits (90), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 27/38 (71%)
Query: 36 SVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV 73
+V R+L P +G V+G+ GK++ IRQE+ A+++V+
Sbjct: 226 AVCCRLLAPSNQVGCVLGRGGKIVEKIRQESGAQIRVL 263
>gi|291400299|ref|XP_002716509.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 2-like
isoform 1 [Oryctolagus cuniculus]
Length = 599
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 151/333 (45%), Gaps = 41/333 (12%)
Query: 301 GASQSEE--LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
G+SQ+ + +R+L P +G +IGK G TIK+I + + +++D+ K+N VT
Sbjct: 185 GSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHR-KENSGAAEKPVT 243
Query: 359 AIESPDDIKSMAVEAVLLLQTKINDEDD--DTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
+P+ S A +L + K DE + + +++L + ++G +IGK G + +I
Sbjct: 244 IHATPEGT-SEACRMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEH 302
Query: 417 RTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPV 476
T + IS + + + V G V + A +I+ +LR+ A ++ + N
Sbjct: 303 ETGTKITISSLQDLSIYNP-ERTITVKGTVEACASAEAEIMKKLRE-AFENDMLAVNQQA 360
Query: 477 GADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPY 536
L+P + + LG +G+ ML + + P+
Sbjct: 361 N---------------LIPGLN-LSALGI-----FSTGLSMLPPPAGPRGAPPTAPYHPF 399
Query: 537 GSMSSYSSKLY-----------GGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGA 585
+ S Y S LY P + + +P AVG +IGK G+++ + + +GA
Sbjct: 400 ATHSGYFSSLYPHHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGA 459
Query: 586 TIEMSDSKS-SRGDRVALISGTPEQKRAAENLI 617
+I+++ ++ +R+ +I+G PE + A+ I
Sbjct: 460 SIKIAPAEGPDVSERMVIITGPPEAQFKAQGRI 492
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 88/393 (22%), Positives = 153/393 (38%), Gaps = 91/393 (23%)
Query: 142 CQILVPSSQSANIIGKAGATIKRLRSKTRT-----------------SIKVTPKDASEPT 184
+ILVP+ IIGK G TIK + +T++ +I TP+ SE
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTSE-- 253
Query: 185 HSCAMEFDNFVLISGESEAVKKA------LFAISAIMYKFSPREDIPLETTVREAPPSII 238
+C M + ++ E++ K A + A + ++ + +E L+ E I
Sbjct: 254 -ACRMILE---IMQKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKIT 309
Query: 239 IPS--DVPIYPPGGLYPNADPILPSRS----VPSILGAARVPDLQGYADTGNTWP----- 287
I S D+ IY P + S + L A D+ N P
Sbjct: 310 ISSLQDLSIYNPERTITVKGTVEACASAEAEIMKKLREAFENDMLAVNQQANLIPGLNLS 369
Query: 288 ---VYSTGLSLV---------------------SGLVGA--------------SQSEELV 309
++STGLS++ SG + S E+ +
Sbjct: 370 ALGIFSTGLSMLPPPAGPRGAPPTAPYHPFATHSGYFSSLYPHHQFGPFPHHHSYPEQEI 429
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTK--DNRDECVITVTAIESPDDIK 367
+ + P +G +IGK G IK + + +GA I + + D + VI I P + +
Sbjct: 430 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVI----ITGPPEAQ 485
Query: 368 SMA---VEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRI 424
A + L + N +++ + + V S G +IGK G +NE++ T A+V +
Sbjct: 486 FKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEVIV 545
Query: 425 SKGDKPKCADANDE-LVEVVGEVGSVRDALVQI 456
+ P D N+E +V ++G + + A +I
Sbjct: 546 PRDQTP---DENEEVIVRIIGHFFASQTAQRKI 575
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 10/97 (10%)
Query: 138 EKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLI 197
E+E + +P+ IIGK GA IK+L SIK+ P + + + + V+I
Sbjct: 426 EQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVS-------ERMVII 478
Query: 198 SGESEAVKKALFAISAIMYK---FSPREDIPLETTVR 231
+G EA KA I + + F+P+E++ LE +R
Sbjct: 479 TGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIR 515
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 58/148 (39%), Gaps = 24/148 (16%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPF-PGAKDRVVTIYSHVKDK 93
E I + P +G++IGK G I + + A +K+ P +R+V I
Sbjct: 426 EQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII------- 478
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
+A K I + + K + K E I VPSS +
Sbjct: 479 ---------------TGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGR 523
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+IGK G T+ L++ T + + P+D +
Sbjct: 524 VIGKGGKTVNELQNLTSAEV-IVPRDQT 550
>gi|332215027|ref|XP_003256638.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 1 [Nomascus leucogenys]
Length = 599
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 152/333 (45%), Gaps = 41/333 (12%)
Query: 301 GASQSEE--LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
G SQ+ + +R+L P +G +IGK G TIK+I + + +++D+ K+N VT
Sbjct: 185 GTSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHR-KENSGAAEKPVT 243
Query: 359 AIESPDDIKSMAVEAVLLLQTKINDEDD--DTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
+P+ S A +L + K DE + + +++L + ++G +IGK G + +I
Sbjct: 244 IHATPEGT-SEACRMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEH 302
Query: 417 RTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPV 476
T + IS + + + V G V + A ++I+ +LR+ A ++ + N
Sbjct: 303 ETGTKITISSLQDLSIYNP-ERTITVKGTVEACASAEIEIMKKLRE-AFENDMLAVNQQA 360
Query: 477 GADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPY 536
L+P + + LG +G+ +LS + + P+
Sbjct: 361 N---------------LIPGLN-LSALGI-----FSTGLSVLSPPAGPRGAPPAAPYHPF 399
Query: 537 GSMSSYSSKLY-----------GGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGA 585
+ S Y S LY P + + +P AVG +IGK G+++ + + +GA
Sbjct: 400 ATHSGYFSSLYPHHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGA 459
Query: 586 TIEMSDSKS-SRGDRVALISGTPEQKRAAENLI 617
+I+++ ++ +R+ +I+G PE + A+ I
Sbjct: 460 SIKIAPAEGPDVSERMVIITGPPEAQFKAQGRI 492
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 88/393 (22%), Positives = 153/393 (38%), Gaps = 91/393 (23%)
Query: 142 CQILVPSSQSANIIGKAGATIKRLRSKTRT-----------------SIKVTPKDASEPT 184
+ILVP+ IIGK G TIK + +T++ +I TP+ SE
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTSE-- 253
Query: 185 HSCAMEFDNFVLISGESEAVKKA------LFAISAIMYKFSPREDIPLETTVREAPPSII 238
+C M + ++ E++ K A + A + ++ + +E L+ E I
Sbjct: 254 -ACRMILE---IMQKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKIT 309
Query: 239 IPS--DVPIYPPGGLYPNADPILPSRS----VPSILGAARVPDLQGYADTGNTWP----- 287
I S D+ IY P + S + L A D+ N P
Sbjct: 310 ISSLQDLSIYNPERTITVKGTVEACASAEIEIMKKLREAFENDMLAVNQQANLIPGLNLS 369
Query: 288 ---VYSTGLSLVS---------------------GLVGA--------------SQSEELV 309
++STGLS++S G + S E+ +
Sbjct: 370 ALGIFSTGLSVLSPPAGPRGAPPAAPYHPFATHSGYFSSLYPHHQFGPFPHHHSYPEQEI 429
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTK--DNRDECVITVTAIESPDDIK 367
+ + P +G +IGK G IK + + +GA I + + D + VI I P + +
Sbjct: 430 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVI----ITGPPEAQ 485
Query: 368 SMA---VEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRI 424
A + L + N +++ + + V S G +IGK G +NE++ T A+V +
Sbjct: 486 FKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEVIV 545
Query: 425 SKGDKPKCADANDE-LVEVVGEVGSVRDALVQI 456
+ P D N+E +V ++G + + A +I
Sbjct: 546 PRDQTP---DENEEVIVRIIGHFFASQTAQRKI 575
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 10/97 (10%)
Query: 138 EKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLI 197
E+E + +P+ IIGK GA IK+L SIK+ P + + + + V+I
Sbjct: 426 EQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVS-------ERMVII 478
Query: 198 SGESEAVKKALFAISAIMYK---FSPREDIPLETTVR 231
+G EA KA I + + F+P+E++ LE +R
Sbjct: 479 TGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIR 515
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 58/148 (39%), Gaps = 24/148 (16%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPF-PGAKDRVVTIYSHVKDK 93
E I + P +G++IGK G I + + A +K+ P +R+V I
Sbjct: 426 EQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII------- 478
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
+A K I + + K + K E I VPSS +
Sbjct: 479 ---------------TGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGR 523
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+IGK G T+ L++ T + + P+D +
Sbjct: 524 VIGKGGKTVNELQNLTSAEV-IVPRDQT 550
>gi|350591798|ref|XP_003483335.1| PREDICTED: replication factor C (activator 1) 4, 37kDa [Sus scrofa]
Length = 578
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 149/333 (44%), Gaps = 41/333 (12%)
Query: 301 GASQSEE--LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
G+SQ+ + +R+L P +G +IGK G TIK+I + + +++D+ K+N VT
Sbjct: 164 GSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHR-KENSGAAEKPVT 222
Query: 359 AIESPDDIKSMAVEAVLLLQTKINDEDD--DTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
+P+ S A +L + K DE + + +++L + ++G +IGK G + +I
Sbjct: 223 IHATPEGT-SEACRMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEH 281
Query: 417 RTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPV 476
T + IS + + + V G V + +A ++I+ +LR+ D
Sbjct: 282 ETGTKITISSLQDLSIYNP-ERTITVKGTVEACANAEIEIMKKLREAFENDMLAVNQ--- 337
Query: 477 GADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPY 536
L+P + + LG +G+ +L + + P+
Sbjct: 338 -------------QANLIPGLN-LSALGI-----FSTGLSVLPPPAGPRGAPPAPPYHPF 378
Query: 537 GSMSSYSSKLY-----------GGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGA 585
+ S Y S LY P + + +P AVG +IGK G+++ + + +GA
Sbjct: 379 ATHSGYFSSLYPPHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGA 438
Query: 586 TIEMSDSKS-SRGDRVALISGTPEQKRAAENLI 617
+I+++ ++ +R+ +I+G PE + A+ I
Sbjct: 439 SIKIAPAEGPDVSERMVIITGPPEAQFKAQGRI 471
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 89/396 (22%), Positives = 156/396 (39%), Gaps = 97/396 (24%)
Query: 142 CQILVPSSQSANIIGKAGATIKRLRSKTRT-----------------SIKVTPKDASEPT 184
+ILVP+ IIGK G TIK + +T++ +I TP+ SE
Sbjct: 175 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTSE-- 232
Query: 185 HSCAMEFDNFVLISGESEAVKKA------LFAISAIMYKFSPREDIPLETTVREAPPSII 238
+C M + ++ E++ K A + A + ++ + +E L+ E I
Sbjct: 233 -ACRMILE---IMQKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKIT 288
Query: 239 IPS--DVPIYPP-------GGLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTWP-- 287
I S D+ IY P G + A+ + + L A D+ N P
Sbjct: 289 ISSLQDLSIYNPERTITVKGTVEACANAEI---EIMKKLREAFENDMLAVNQQANLIPGL 345
Query: 288 ------VYSTGLSLV---------------------SGLVGA--------------SQSE 306
++STGLS++ SG + S E
Sbjct: 346 NLSALGIFSTGLSVLPPPAGPRGAPPAPPYHPFATHSGYFSSLYPPHQFGPFPHHHSYPE 405
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTK--DNRDECVITVTAIESPD 364
+ ++ + P +G +IGK G IK + + +GA I + + D + VI I P
Sbjct: 406 QEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVI----ITGPP 461
Query: 365 DIKSMA---VEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKAD 421
+ + A + L + N +++ + + V S G +IGK G +NE++ T A+
Sbjct: 462 EAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAE 521
Query: 422 VRISKGDKPKCADANDE-LVEVVGEVGSVRDALVQI 456
V + + P D N+E +V ++G + + A +I
Sbjct: 522 VIVPRDQTP---DENEEVIVRIIGHFFASQTAQRKI 554
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 58/148 (39%), Gaps = 24/148 (16%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPF-PGAKDRVVTIYSHVKDK 93
E I + P +G++IGK G I + + A +K+ P +R+V I
Sbjct: 405 EQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII------- 457
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
+A K I + + K + K E I VPSS +
Sbjct: 458 ---------------TGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGR 502
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+IGK G T+ L++ T + + P+D +
Sbjct: 503 VIGKGGKTVNELQNLTSAEV-IVPRDQT 529
Score = 39.3 bits (90), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 63/138 (45%), Gaps = 24/138 (17%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKEDVEV 98
RIL P +G++IGK G I +I ++T++RV + GA ++ VTI++
Sbjct: 176 RILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHA---------- 225
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
E A +L++ A ++ K E+ +IL + +IGK
Sbjct: 226 -----TPEGTSEACRMILEIMQKEA--------DETKLAEEIPLKILAHNGLVGRLIGKE 272
Query: 159 GATIKRLRSKTRTSIKVT 176
G +K++ +T T I ++
Sbjct: 273 GRNLKKIEHETGTKITIS 290
>gi|348528027|ref|XP_003451520.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like
[Oreochromis niloticus]
Length = 429
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 103/392 (26%), Positives = 164/392 (41%), Gaps = 85/392 (21%)
Query: 302 ASQSEELV-IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAI 360
+ ++E+V +RVL G VIGKGG IK++R A + V D+ E +++V A
Sbjct: 37 SRNTDEMVELRVLLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSG--PERILSVNA- 93
Query: 361 ESPDDIKSMAVEAVLLLQTKINDED-DDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
S D I + ++ + L+ + D +RLL+ + G IIG G+ I E+R+ T+
Sbjct: 94 -SIDTIGEILLKIIPTLEEYQHYSGIDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQ 152
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDA-LKDRDGSRNP---- 474
+++ + C + D +V V G+ V + +++IL L +A +K R +P
Sbjct: 153 TTIKLFQ---ECCPHSTDRVVLVGGKPERVVEC-IKVILELVSEAPIKGRAQPYDPNFYD 208
Query: 475 ------------------PVGADHIYSSGTGISMPPLLPSIP-PVGPLGYD--------- 506
P+G I G MPP+ S P P YD
Sbjct: 209 ETYDYGGFTMLFEERGRRPIGGFPIRVRGGFERMPPVRGSRPMPPSRRDYDDMSPRRGPP 268
Query: 507 ---QRADSGS---------------GIGMLSSSSLYG---------------YGSLSMGD 533
R GS G S S +G Y S+S G
Sbjct: 269 PPLSRGRGGSRARNLPLPPPPPPRGGGDRFSHGSYHGSMDDRPSDRRGRGDRYDSMSGGG 328
Query: 534 SPYGSMSSYSSKLYGGLP-------PPLTLEVLVPANAVGKVIGKAGSNLANIRKISGAT 586
Y + SS+ GG P +T +V +P + G +IGK G + IR SGA+
Sbjct: 329 --YDNSSSWDHFQSGGRGSYSDIGGPVITTQVTIPKDLAGSIIGKGGQRIKQIRHESGAS 386
Query: 587 IEMSDSKSSRGDRVALISGTPEQKRAAENLIQ 618
I++ + DR+ I+GT +Q + A+ L+Q
Sbjct: 387 IKIDEPLEGSEDRIITITGTQDQIQNAQYLLQ 418
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 86/204 (42%), Gaps = 38/204 (18%)
Query: 13 DNDRDGKNQKRRINE----KDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRA 68
+ D +GK ++E K + +E V R+L G+VIGK GK I ++R + A
Sbjct: 16 NTDTNGKRPAEDMDEEQAFKRSRNTDEMVELRVLLQSKNAGAVIGKGGKNIKALRTDYNA 75
Query: 69 RVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVA- 127
V V P +R++++ + + ++ LLK+ +
Sbjct: 76 SVSV--PDSSGPERILSVNASIDTIGEI------------------LLKIIPTLEEYQHY 115
Query: 128 NATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSC 187
+ D D E ++L+ S + IIG GA IK LR T+T+IK+ C
Sbjct: 116 SGIDFDC------ELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLF-------QECC 162
Query: 188 AMEFDNFVLISGESEAVKKALFAI 211
D VL+ G+ E V + + I
Sbjct: 163 PHSTDRVVLVGGKPERVVECIKVI 186
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 33/50 (66%)
Query: 37 VIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTI 86
+ ++ P + GS+IGK G+ I IR E+ A +K+ +P G++DR++TI
Sbjct: 354 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITI 403
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 53/108 (49%), Gaps = 17/108 (15%)
Query: 278 GYADTGNTWPVYSTG----LSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSI 333
G D ++W + +G S + G V + +V P + G +IGKGG IK I
Sbjct: 327 GGYDNSSSWDHFQSGGRGSYSDIGGPV-------ITTQVTIPKDLAGSIIGKGGQRIKQI 379
Query: 334 RQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKI 381
R SGA I +D+ + ++ +IT+T + D I++ A LLQ +
Sbjct: 380 RHESGASIKIDEPLEGSEDRIITITGTQ--DQIQN----AQYLLQNSV 421
Score = 38.9 bits (89), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 42/81 (51%), Gaps = 10/81 (12%)
Query: 142 CQILVPSSQSANIIGKAGATIKRLRSKTRTSIKV-TPKDASEPTHSCAMEFDNFVLISGE 200
Q+ +P + +IIGK G IK++R ++ SIK+ P + SE D + I+G
Sbjct: 356 TQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSE---------DRIITITGT 406
Query: 201 SEAVKKALFAISAIMYKFSPR 221
+ ++ A + + + ++S R
Sbjct: 407 QDQIQNAQYLLQNSVRQYSGR 427
>gi|397470081|ref|XP_003806662.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 3 [Pan paniscus]
gi|179479866|gb|ACB86625.1| insulin-like 2 growth factor 2-binding protein 2 [Homo sapiens]
Length = 542
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 152/333 (45%), Gaps = 41/333 (12%)
Query: 301 GASQSEE--LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
G SQ+ + +R+L P +G +IGK G TIK+I + + +++D+ K+N VT
Sbjct: 128 GTSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHR-KENSGAAEKPVT 186
Query: 359 AIESPDDIKSMAVEAVLLLQTKINDEDD--DTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
+P+ S A +L + K DE + + +++L + ++G +IGK G + +I
Sbjct: 187 IHATPEGT-SEACRMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEH 245
Query: 417 RTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPV 476
T + IS + + + V G V + A ++I+ +LR+ A ++ + N
Sbjct: 246 ETGTKITISSLQDLSIYNP-ERTITVKGTVEACASAEIEIMKKLRE-AFENDMLAVNQQA 303
Query: 477 GADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPY 536
L+P + + LG +G+ +LS + + P+
Sbjct: 304 N---------------LIPGLN-LSALGI-----FSTGLSVLSPPAGPRGAPPAAPYHPF 342
Query: 537 GSMSSYSSKLY-----------GGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGA 585
+ S Y S LY P + + +P AVG +IGK G+++ + + +GA
Sbjct: 343 TTHSGYFSSLYPHHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGA 402
Query: 586 TIEMSDSKS-SRGDRVALISGTPEQKRAAENLI 617
+I+++ ++ +R+ +I+G PE + A+ I
Sbjct: 403 SIKIAPAEGPDVSERMVIITGPPEAQFKAQGRI 435
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 88/393 (22%), Positives = 153/393 (38%), Gaps = 91/393 (23%)
Query: 142 CQILVPSSQSANIIGKAGATIKRLRSKTRT-----------------SIKVTPKDASEPT 184
+ILVP+ IIGK G TIK + +T++ +I TP+ SE
Sbjct: 139 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTSE-- 196
Query: 185 HSCAMEFDNFVLISGESEAVKKA------LFAISAIMYKFSPREDIPLETTVREAPPSII 238
+C M + ++ E++ K A + A + ++ + +E L+ E I
Sbjct: 197 -ACRMILE---IMQKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKIT 252
Query: 239 IPS--DVPIYPPGGLYPNADPILPSRS----VPSILGAARVPDLQGYADTGNTWP----- 287
I S D+ IY P + S + L A D+ N P
Sbjct: 253 ISSLQDLSIYNPERTITVKGTVEACASAEIEIMKKLREAFENDMLAVNQQANLIPGLNLS 312
Query: 288 ---VYSTGLSLVS---------------------GLVGA--------------SQSEELV 309
++STGLS++S G + S E+ +
Sbjct: 313 ALGIFSTGLSVLSPPAGPRGAPPAAPYHPFTTHSGYFSSLYPHHQFGPFPHHHSYPEQEI 372
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTK--DNRDECVITVTAIESPDDIK 367
+ + P +G +IGK G IK + + +GA I + + D + VI I P + +
Sbjct: 373 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVI----ITGPPEAQ 428
Query: 368 SMA---VEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRI 424
A + L + N +++ + + V S G +IGK G +NE++ T A+V +
Sbjct: 429 FKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEVIV 488
Query: 425 SKGDKPKCADANDE-LVEVVGEVGSVRDALVQI 456
+ P D N+E +V ++G + + A +I
Sbjct: 489 PRDQTP---DENEEVIVRIIGHFFASQTAQRKI 518
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 10/97 (10%)
Query: 138 EKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLI 197
E+E + +P+ IIGK GA IK+L SIK+ P + + + + V+I
Sbjct: 369 EQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVS-------ERMVII 421
Query: 198 SGESEAVKKALFAISAIMYK---FSPREDIPLETTVR 231
+G EA KA I + + F+P+E++ LE +R
Sbjct: 422 TGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIR 458
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 58/148 (39%), Gaps = 24/148 (16%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPF-PGAKDRVVTIYSHVKDK 93
E I + P +G++IGK G I + + A +K+ P +R+V I
Sbjct: 369 EQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII------- 421
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
+A K I + + K + K E I VPSS +
Sbjct: 422 ---------------TGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGR 466
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+IGK G T+ L++ T + + P+D +
Sbjct: 467 VIGKGGKTVNELQNLTSAEV-IVPRDQT 493
>gi|401885149|gb|EJT49276.1| cytoplasm protein [Trichosporon asahii var. asahii CBS 2479]
gi|406694587|gb|EKC97911.1| cytoplasm protein [Trichosporon asahii var. asahii CBS 8904]
Length = 351
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 150/326 (46%), Gaps = 26/326 (7%)
Query: 306 EELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDD 365
EEL +R L + G +IGKGG TI +IRQ + + V + V++V+ P+
Sbjct: 17 EELTLRSLVSTKEAGIIIGKGGATIANIRQVANCKAGVSKVVPGVQDRVLSVSG--DPEA 74
Query: 366 IKSMAVEAV-LLLQTKINDED------DDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRT 418
I + E LLL+T ++D + +IRLL+S ++G +IG++G I +I+ +
Sbjct: 75 IAAAYAEVARLLLETPLSDSSMPPPPVNQFTSIRLLISHNLMGTVIGRAGVKIKQIQDMS 134
Query: 419 KADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGA 478
A + SK P+ + + +VEV G +++ A+ +I L +D RN
Sbjct: 135 GARMVASKEMLPQ---STERVVEVQGAQDAIKTAIFEIAKCLLEDW------ERNTGTVQ 185
Query: 479 DHIYSSGTGISMPPLLPSIPPVGPLGYDQRAD------SGSGIGMLSSSSLYGYGSLSMG 532
H ++G + L + GP G +R G +S GS+S G
Sbjct: 186 YHPGAAGDAGVLAGGLGAQAVTGPTGGIRRTSMGGFGSGSPGPNFNNSDRRVSRGSISGG 245
Query: 533 DSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSD- 591
S S S + P T + +P++ VG +IG+ G+ + IR++SG+ I ++
Sbjct: 246 TSGQERRVSESQPVLND-PNLRTQNISIPSDMVGCIIGRGGTKITEIRRLSGSRISIAKV 304
Query: 592 SKSSRGDRVALISGTPEQKRAAENLI 617
G+R+ I GT E A L+
Sbjct: 305 PHDETGERMFTIVGTAESTERALMLL 330
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 31/58 (53%)
Query: 551 PPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPE 608
P LTL LV G +IGK G+ +ANIR+++ +S DRV +SG PE
Sbjct: 16 PEELTLRSLVSTKEAGIIIGKGGATIANIRQVANCKAGVSKVVPGVQDRVLSVSGDPE 73
>gi|397470077|ref|XP_003806660.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 1 [Pan paniscus]
gi|179479906|gb|ACB86626.1| insulin-like 2 growth factor 2-binding protein 2 [Homo sapiens]
Length = 536
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 149/333 (44%), Gaps = 41/333 (12%)
Query: 301 GASQSEE--LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
G SQ+ + +R+L P +G +IGK G TIK+I + + +++D+ K+N VT
Sbjct: 122 GTSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHR-KENSGAAEKPVT 180
Query: 359 AIESPDDIKSMAVEAVLLLQTKINDEDD--DTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
+P+ S A +L + K DE + + +++L + ++G +IGK G + +I
Sbjct: 181 IHATPEGT-SEACRMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEH 239
Query: 417 RTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPV 476
T + IS + + + V G V + A ++I+ +LR+ A ++ + N
Sbjct: 240 ETGTKITISSLQDLSIYNP-ERTITVKGTVEACASAEIEIMKKLRE-AFENDMLAVNQQA 297
Query: 477 GADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPY 536
L+P L +G+ +LS + + P+
Sbjct: 298 N---------------LIPG------LNLSALGIFSTGLSVLSPPAGPRGAPPAAPYHPF 336
Query: 537 GSMSSYSSKLY-----------GGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGA 585
+ S Y S LY P + + +P AVG +IGK G+++ + + +GA
Sbjct: 337 TTHSGYFSSLYPHHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGA 396
Query: 586 TIEMSDSKS-SRGDRVALISGTPEQKRAAENLI 617
+I+++ ++ +R+ +I+G PE + A+ I
Sbjct: 397 SIKIAPAEGPDVSERMVIITGPPEAQFKAQGRI 429
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 88/393 (22%), Positives = 153/393 (38%), Gaps = 91/393 (23%)
Query: 142 CQILVPSSQSANIIGKAGATIKRLRSKTRT-----------------SIKVTPKDASEPT 184
+ILVP+ IIGK G TIK + +T++ +I TP+ SE
Sbjct: 133 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTSE-- 190
Query: 185 HSCAMEFDNFVLISGESEAVKKA------LFAISAIMYKFSPREDIPLETTVREAPPSII 238
+C M + ++ E++ K A + A + ++ + +E L+ E I
Sbjct: 191 -ACRMILE---IMQKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKIT 246
Query: 239 IPS--DVPIYPPGGLYPNADPILPSRS----VPSILGAARVPDLQGYADTGNTWP----- 287
I S D+ IY P + S + L A D+ N P
Sbjct: 247 ISSLQDLSIYNPERTITVKGTVEACASAEIEIMKKLREAFENDMLAVNQQANLIPGLNLS 306
Query: 288 ---VYSTGLSLVS---------------------GLVGA--------------SQSEELV 309
++STGLS++S G + S E+ +
Sbjct: 307 ALGIFSTGLSVLSPPAGPRGAPPAAPYHPFTTHSGYFSSLYPHHQFGPFPHHHSYPEQEI 366
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTK--DNRDECVITVTAIESPDDIK 367
+ + P +G +IGK G IK + + +GA I + + D + VI I P + +
Sbjct: 367 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVI----ITGPPEAQ 422
Query: 368 SMA---VEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRI 424
A + L + N +++ + + V S G +IGK G +NE++ T A+V +
Sbjct: 423 FKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEVIV 482
Query: 425 SKGDKPKCADANDE-LVEVVGEVGSVRDALVQI 456
+ P D N+E +V ++G + + A +I
Sbjct: 483 PRDQTP---DENEEVIVRIIGHFFASQTAQRKI 512
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 10/97 (10%)
Query: 138 EKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLI 197
E+E + +P+ IIGK GA IK+L SIK+ P + + + + V+I
Sbjct: 363 EQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVS-------ERMVII 415
Query: 198 SGESEAVKKALFAISAIMYK---FSPREDIPLETTVR 231
+G EA KA I + + F+P+E++ LE +R
Sbjct: 416 TGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIR 452
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 58/148 (39%), Gaps = 24/148 (16%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPF-PGAKDRVVTIYSHVKDK 93
E I + P +G++IGK G I + + A +K+ P +R+V I
Sbjct: 363 EQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII------- 415
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
+A K I + + K + K E I VPSS +
Sbjct: 416 ---------------TGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGR 460
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+IGK G T+ L++ T + + P+D +
Sbjct: 461 VIGKGGKTVNELQNLTSAEV-IVPRDQT 487
>gi|147789387|emb|CAN73316.1| hypothetical protein VITISV_043333 [Vitis vinifera]
Length = 511
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 106/221 (47%), Gaps = 15/221 (6%)
Query: 302 ASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT--A 359
S+ ++ + R LCP KIG +I +G +K R + +I + DT +E V+T+ +
Sbjct: 286 TSRLKDTIYRYLCPGKKIGSIIRRGWKIVKQQRVDTKPKISIGDTVSGCEEHVVTIYNFS 345
Query: 360 IESP-DDIKSMAVEAVLLLQTKINDE-DDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKR 417
IES D + V + +++D D V + IGC+IGK G II IR
Sbjct: 346 IESNVFDNSNTFVSPTQNVLFRVHDRVISDEVHDENFEEASQIGCVIGKGGQIIQSIRSE 405
Query: 418 TKADVRISKGDK-PKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRD-GSRNPP 475
+ A +RI K D P ++D+L+++ GE V AL QI RL D+ + + P
Sbjct: 406 SGAQIRILKDDHLPSRVLSSDKLIQISGEPSLVMKALYQIASRLHDNPSQSQHLLVXTMP 465
Query: 476 VGADHIYSSGTGISMP----PLLPSIPPVGPLGYDQRADSG 512
G YSSG + P P++ P VG G R DSG
Sbjct: 466 TG----YSSGGSLMGPTSSAPIMGLAPLVGTYG-GYRGDSG 501
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 88/179 (49%), Gaps = 21/179 (11%)
Query: 38 IYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVE 97
IYR LCP IGS+I + K++ R +T+ ++ + D G ++ VVTIY+ +E
Sbjct: 293 IYRYLCPGKKIGSIIRRGWKIVKQQRVDTKPKISIGDTVSGCEEHVVTIYNF-----SIE 347
Query: 98 VDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGK 157
+ N + Q+ L +VH + +D+ E E +SQ +IGK
Sbjct: 348 SNVFDNSNTFVSPTQNVLFRVHDRVI--------SDEVHDENFE-----EASQIGCVIGK 394
Query: 158 AGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMY 216
G I+ +RS++ I++ KD P+ + D + ISGE V KAL+ I++ ++
Sbjct: 395 GGQIIQSIRSESGAQIRIL-KDDHLPSR--VLSSDKLIQISGEPSLVMKALYQIASRLH 450
>gi|392573629|gb|EIW66768.1| hypothetical protein TREMEDRAFT_65168 [Tremella mesenterica DSM
1558]
Length = 350
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 153/333 (45%), Gaps = 38/333 (11%)
Query: 301 GASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAI 360
G S +L +R L + G +IGKGG TI IR + + V + V +V+
Sbjct: 18 GHSDEPQLSLRALVSTKEAGILIGKGGQTIADIRAKTNVKAGVSKVVPGVQDRVFSVSG- 76
Query: 361 ESPDDIKSMAVE-AVLLLQTKINDED------DDTVTIRLLVSSKVIGCIIGKSGSIINE 413
+ D + + E A LLL+T ++D ++RLL+S ++G +IG+SG+ I +
Sbjct: 77 -AVDHVAAAFAEVARLLLETPLSDSSLPPPPVGAFTSVRLLISHNLMGTVIGRSGAKIKQ 135
Query: 414 IRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRN 473
I+ + A + SK P+ + + +VE+ G V +++ A+++I L +D RN
Sbjct: 136 IQDESGARMVASKEMLPQ---STERVVEIQGSVEAIKTAVLEIGKCLMEDW------ERN 186
Query: 474 PPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYG-SLSMG 532
H ++G + G LG GI S + +G+G M
Sbjct: 187 TGTVLYHPGAAGDAGVL---------AGGLGAQTVTGGLGGIRRSSVAPSFGFGGERRMS 237
Query: 533 DSPYGSMSSYSSKLYGGLPPPL-------TLEVLVPANAVGKVIGKAGSNLANIRKISGA 585
P S S + ++ PP+ T + +P++ VG +IG+ G+ + IR++SG+
Sbjct: 238 GRPSISAPSETRRVSDA--PPMVNDPNLRTQNISIPSDMVGCIIGRGGTKITEIRRLSGS 295
Query: 586 TIEMSDS-KSSRGDRVALISGTPEQKRAAENLI 617
I ++ + G+R+ I GT + A L+
Sbjct: 296 RISIAKAPHDETGERMFTIVGTADATERALMLL 328
>gi|431838851|gb|ELK00780.1| Insulin-like growth factor 2 mRNA-binding protein 2 [Pteropus
alecto]
Length = 820
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 151/333 (45%), Gaps = 41/333 (12%)
Query: 301 GASQSEE--LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
G+SQ+ + +R+L P +G +IGK G TIK+I + + +++D+ K+N VT
Sbjct: 406 GSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIH-RKENSGAAEKPVT 464
Query: 359 AIESPDDIKSMAVEAVLLLQTKINDEDD--DTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
+P+ S A +L + K DE + + +++L + ++G +IGK G + +I
Sbjct: 465 IHATPEGT-SEACRMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEH 523
Query: 417 RTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPV 476
T + IS + + + V G V + A ++I+ +LR+ D
Sbjct: 524 ETGTKITISSLQDLSIYNP-ERTITVKGTVEACASAEIEIMKKLREAFEND--------- 573
Query: 477 GADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPY 536
+ + ++ P L ++ +G +G+ +L + + P+
Sbjct: 574 ----MLAVNQQANLIPGL-NLSALGIFS--------TGLSVLPPPAGPRGAPPAPPYHPF 620
Query: 537 GSMSSYSSKLY-----------GGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGA 585
+ S Y S LY P + + +P AVG +IGK G+++ + + +GA
Sbjct: 621 ATHSGYFSSLYPPHQFSPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGA 680
Query: 586 TIEMSDSKSSR-GDRVALISGTPEQKRAAENLI 617
+I+++ ++ +R+ +I+G PE + A+ I
Sbjct: 681 SIKIAPAEGPDVSERMVIITGPPEAQFKAQGRI 713
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 76/160 (47%), Gaps = 13/160 (8%)
Query: 303 SQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTK--DNRDECVITVTAI 360
S E+ ++ + P +G +IGK G IK + + +GA I + + D + VI I
Sbjct: 644 SYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVI----I 699
Query: 361 ESPDDIKSMA---VEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKR 417
P + + A + L + N +++ + + V S G +IGK G +NE++
Sbjct: 700 TGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNL 759
Query: 418 TKADVRISKGDKPKCADANDE-LVEVVGEVGSVRDALVQI 456
T A+V + + P D N+E +V ++G + + A +I
Sbjct: 760 TSAEVIVPRDQTP---DENEEVIVRIIGHFFASQTAQRKI 796
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 58/148 (39%), Gaps = 24/148 (16%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPF-PGAKDRVVTIYSHVKDK 93
E I + P +G++IGK G I + + A +K+ P +R+V I
Sbjct: 647 EQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII------- 699
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
+A K I + + K + K E I VPSS +
Sbjct: 700 ---------------TGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGR 744
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+IGK G T+ L++ T + + P+D +
Sbjct: 745 VIGKGGKTVNELQNLTSAEV-IVPRDQT 771
>gi|149036630|gb|EDL91248.1| similar to Pol(yrC)-binding protein 1 (Alpha-CP1) (hnRNP-E1)
(predicted) [Rattus norvegicus]
Length = 337
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 152/337 (45%), Gaps = 50/337 (14%)
Query: 318 KIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVL-L 376
++G +IGK G ++K IR+ SGA+I++ + N E +IT+T P + A ++
Sbjct: 5 EVGSIIGKKGESVKRIREESGARINISE--GNCPERIITLTG---PTNAIFKAFAMIIDK 59
Query: 377 LQTKINDEDDDT-------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDK 429
L+ IN ++ VT+RL+V + G +IGK G I EIR+ T A V+++
Sbjct: 60 LEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 119
Query: 430 PKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGS----------RNPPV--- 476
P ++ + + + G SV + + QI L + + + G + PV
Sbjct: 120 P---NSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPMPASSPVICA 176
Query: 477 -GADHI-----YSSGTG-ISMPPL-------LPSIPPVGPLGYDQRADSGSGIGMLSSSS 522
G D Y T + PPL +I P+ +Q A S M+ +
Sbjct: 177 GGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISPLDLAKLNQVARQQSHFAMMHGGT 236
Query: 523 LYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKI 582
G+ + DS + Y + L T E+ +P N +G +IG+ G+N+ IR++
Sbjct: 237 --GFAGI---DSSSPEVKGYWASLDAST--QTTHELTIPNNLIGCIIGRQGANINEIRQM 289
Query: 583 SGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQA 619
SGA I++++ R I+G+ A+ LI A
Sbjct: 290 SGAQIKIANPVEGSSGRQVTITGSAASISLAQYLINA 326
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 78/348 (22%), Positives = 139/348 (39%), Gaps = 79/348 (22%)
Query: 48 IGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEP 107
+GS+IGK G+ + IR+E+ AR+ + + +R++T
Sbjct: 6 VGSIIGKKGESVKRIREESGARINISEG--NCPERIIT---------------------- 41
Query: 108 LCAAQDALLKVHAAIANAV-----ANATDNDKKRKEKEECQILVPSSQSANIIGKAGATI 162
L +A+ K A I + + ++ T++ + +++VP++Q ++IGK G I
Sbjct: 42 LTGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKI 101
Query: 163 KRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPRE 222
K +R T ++V T + + I+G ++V + + I +M + +
Sbjct: 102 KEIRESTGAQVQVAGDMLPNST-------ERAITIAGVPQSVTECVKQICLVMLETLSQS 154
Query: 223 DIPLETTVREAPPSIIIPSDVPIYPPGGL--------YPNADPIL--PSRSVPSILGAAR 272
T+ P +P+ P+ GG YP+A L P SI G
Sbjct: 155 PQGRVMTIPYQP----MPASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHT 210
Query: 273 VPDL---------------------QGYADTGNTWPVYSTGLSLVSGLVGASQ-SEELVI 310
+ L G+A ++ P + L ++Q + EL I
Sbjct: 211 ISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVK---GYWASLDASTQTTHELTI 267
Query: 311 RVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
P N IG +IG+ G I IRQ SGAQI + + + +T+T
Sbjct: 268 ----PNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTIT 311
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 31/48 (64%)
Query: 39 YRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTI 86
+ + P+ +IG +IG+ G IN IRQ + A++K+ +P G+ R VTI
Sbjct: 263 HELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTI 310
Score = 39.7 bits (91), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 9/82 (10%)
Query: 398 KVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQII 457
K +G IIGK G + IR+ + A + IS+G+ P + ++ + G ++ A II
Sbjct: 4 KEVGSIIGKKGESVKRIREESGARINISEGNCP------ERIITLTGPTNAIFKAFAMII 57
Query: 458 LRLRDD---ALKDRDGSRNPPV 476
+L +D ++ + + PPV
Sbjct: 58 DKLEEDINSSMTNSTAASRPPV 79
>gi|440899520|gb|ELR50813.1| Insulin-like growth factor 2 mRNA-binding protein 2 [Bos grunniens
mutus]
Length = 597
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/333 (22%), Positives = 150/333 (45%), Gaps = 41/333 (12%)
Query: 301 GASQSEE--LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
G+SQ+ + +R+L P +G +IGK G TIK+I + + +++D+ K+N VT
Sbjct: 183 GSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHR-KENSGAAEKPVT 241
Query: 359 AIESPDDIKSMAVEAVLLLQTKINDEDD--DTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
+P+ S A +L + K DE + + +++L + ++G +IGK G + +I
Sbjct: 242 IHATPEGT-SEACRMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEH 300
Query: 417 RTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPV 476
T + IS + + + V G V + +A ++I+ +LR+ N +
Sbjct: 301 ETGTKITISSLQDLSIYNP-ERTITVKGTVEACANAEIEIMKKLRE-------AFENDML 352
Query: 477 GADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPY 536
+ + G+++ L +G+ +L + + P+
Sbjct: 353 AVNQQANLIPGLNLSAL---------------GIFSTGLSVLPPPAGPRGAPPAPPYHPF 397
Query: 537 GSMSSYSSKLY-----------GGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGA 585
+ S Y S LY P + + +P AVG +IGK G+++ + + +GA
Sbjct: 398 ATHSGYFSSLYPPHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGA 457
Query: 586 TIEMSDSKS-SRGDRVALISGTPEQKRAAENLI 617
+I+++ ++ +R+ +I+G PE + A+ I
Sbjct: 458 SIKIAPAEGPDVSERMVIITGPPEAQFKAQGRI 490
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 89/396 (22%), Positives = 156/396 (39%), Gaps = 97/396 (24%)
Query: 142 CQILVPSSQSANIIGKAGATIKRLRSKTRT-----------------SIKVTPKDASEPT 184
+ILVP+ IIGK G TIK + +T++ +I TP+ SE
Sbjct: 194 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTSE-- 251
Query: 185 HSCAMEFDNFVLISGESEAVKKA------LFAISAIMYKFSPREDIPLETTVREAPPSII 238
+C M + ++ E++ K A + A + ++ + +E L+ E I
Sbjct: 252 -ACRMILE---IMQKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKIT 307
Query: 239 IPS--DVPIYPP-------GGLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTWP-- 287
I S D+ IY P G + A+ + + L A D+ N P
Sbjct: 308 ISSLQDLSIYNPERTITVKGTVEACANAEI---EIMKKLREAFENDMLAVNQQANLIPGL 364
Query: 288 ------VYSTGLSLV---------------------SGLVGA--------------SQSE 306
++STGLS++ SG + S E
Sbjct: 365 NLSALGIFSTGLSVLPPPAGPRGAPPAPPYHPFATHSGYFSSLYPPHQFGPFPHHHSYPE 424
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTK--DNRDECVITVTAIESPD 364
+ ++ + P +G +IGK G IK + + +GA I + + D + VI I P
Sbjct: 425 QEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVI----ITGPP 480
Query: 365 DIKSMA---VEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKAD 421
+ + A + L + N +++ + + V S G +IGK G +NE++ T A+
Sbjct: 481 EAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAE 540
Query: 422 VRISKGDKPKCADANDE-LVEVVGEVGSVRDALVQI 456
V + + P D N+E +V ++G + + A +I
Sbjct: 541 VIVPRDQTP---DENEEVIVRIIGHFFASQTAQRKI 573
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 58/148 (39%), Gaps = 24/148 (16%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPF-PGAKDRVVTIYSHVKDK 93
E I + P +G++IGK G I + + A +K+ P +R+V I
Sbjct: 424 EQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII------- 476
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
+A K I + + K + K E I VPSS +
Sbjct: 477 ---------------TGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGR 521
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+IGK G T+ L++ T + + P+D +
Sbjct: 522 VIGKGGKTVNELQNLTSAEV-IVPRDQT 548
Score = 38.9 bits (89), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 63/138 (45%), Gaps = 24/138 (17%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKEDVEV 98
RIL P +G++IGK G I +I ++T++RV + GA ++ VTI++
Sbjct: 195 RILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHA---------- 244
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
E A +L++ A ++ K E+ +IL + +IGK
Sbjct: 245 -----TPEGTSEACRMILEIMQKEA--------DETKLAEEIPLKILAHNGLVGRLIGKE 291
Query: 159 GATIKRLRSKTRTSIKVT 176
G +K++ +T T I ++
Sbjct: 292 GRNLKKIEHETGTKITIS 309
>gi|384490263|gb|EIE81485.1| hypothetical protein RO3G_06190 [Rhizopus delemar RA 99-880]
Length = 426
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 89/356 (25%), Positives = 156/356 (43%), Gaps = 56/356 (15%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
+ +R L G +IGKGG + IR +S A++++ D E ++TV S K
Sbjct: 79 ISLRSLVGMKDAGLIIGKGGKNVSEIRDSSMARVNISDIVPGAAERILTVVGPVSAV-AK 137
Query: 368 SMAVEAVLLLQTKINDEDD-----DTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADV 422
+ A+ A +++ ED+ VTI++L+ + +G IIGKSGS+I I++ + A
Sbjct: 138 AYALVAEKIIEENTLAEDNKGPIQQDVTIKILILANRMGSIIGKSGSVIRSIQETSGA-- 195
Query: 423 RISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVG--ADH 480
++S ++P + + +V + G ++ A+ +I L D + P+ A H
Sbjct: 196 KVSAQEEP-LPLSTERVVTIHGTPDAIEQAVKKIGDILVDQPNHHGNYMLYKPIAGAAPH 254
Query: 481 IYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSG---------------------IGMLS 519
SS G G Y + D+ + +G +S
Sbjct: 255 TSSSNHG------------NGHRNYRRSNDNNNAASHAMPTAAAAAMMGYSGMLPMGNMS 302
Query: 520 SSSLY-------GYGSLSMGDSPYGSMSSYSS-KLYGGL----PPPLTLEVLVPANAVGK 567
+ Y G GD P M S+ + GGL P + ++ +P VG
Sbjct: 303 MNGFYYPPTNYPGGSGGRQGDYPLPMMPGLSNLSMMGGLSNMMPATQSQQIYIPNEMVGC 362
Query: 568 VIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFIMA 623
+IGK G + IR+ SG+ I+++D + +R+ I+GTPE + A L+ + + A
Sbjct: 363 IIGKGGMKINEIRQTSGSHIKIADPSTDSHERLITITGTPESNQMALYLLYSRLEA 418
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 78/167 (46%), Gaps = 25/167 (14%)
Query: 49 GSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPL 108
G +IGK GK ++ IR + ARV + D PGA +R++T+ P+
Sbjct: 91 GLIIGKGGKNVSEIRDSSMARVNISDIVPGAAERILTVVG------------------PV 132
Query: 109 CAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSK 168
A A V I A DN ++ +IL+ +++ +IIGK+G+ I+ ++
Sbjct: 133 SAVAKAYALVAEKIIEENTLAEDNKGPIQQDVTIKILILANRMGSIIGKSGSVIRSIQET 192
Query: 169 TRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIM 215
+ KV+ ++ P + + V I G +A+++A+ I I+
Sbjct: 193 --SGAKVSAQEEPLP-----LSTERVVTIHGTPDAIEQAVKKIGDIL 232
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTI 86
+I P+ ++G +IGK G IN IRQ + + +K+ DP + +R++TI
Sbjct: 352 QIYIPNEMVGCIIGKGGMKINEIRQTSGSHIKIADPSTDSHERLITI 398
Score = 42.7 bits (99), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Query: 28 KDEKGN-EESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVT 85
+D KG ++ V +IL +GS+IGKSG VI SI++ + A+V +P P + +RVVT
Sbjct: 154 EDNKGPIQQDVTIKILILANRMGSIIGKSGSVIRSIQETSGAKVSAQEEPLPLSTERVVT 213
Query: 86 IY 87
I+
Sbjct: 214 IH 215
>gi|62087230|dbj|BAD92062.1| poly(rC)-binding protein 2 isoform b variant [Homo sapiens]
Length = 373
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 170/359 (47%), Gaps = 40/359 (11%)
Query: 291 TGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNR 350
T L + +G++ + L IR+L ++G +IGK G ++K +R+ SGA+I++ + N
Sbjct: 9 TLLDMDTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNC 66
Query: 351 DECVITVTAIESPDDIKSMAVEAVL-LLQTKINDEDDDT-------VTIRLLVSSKVIGC 402
E +IT+ P + A ++ L+ I+ ++ VT+RL+V + G
Sbjct: 67 PERIITLAG---PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGS 123
Query: 403 IIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRD 462
+IGK G I EIR+ T A V+++ P ++ + + + G S+ + + QI + + +
Sbjct: 124 LIGKGGCKIKEIRESTGAQVQVAGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLE 180
Query: 463 DALKD-----RDGSRNPPV---GADHIYSSGT-GISMPPLLPSI--------PPVGPLGY 505
K R + PV G YS+G+ S P PS+ PP+
Sbjct: 181 SPPKGVTIPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTI 240
Query: 506 D-QRADSGSGIGMLSSSSL-YGYGSLSMGDSPYGSMSSYSSKL--YGGL---PPPLTLEV 558
Q A + L ++ + ++ G++ + + S S ++ Y GL + E+
Sbjct: 241 QGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWGLDASAQTTSHEL 300
Query: 559 LVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLI 617
+P + +G +IG+ G+ + IR++SGA I++++ DR I+G+ A+ LI
Sbjct: 301 TIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLI 359
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 84/373 (22%), Positives = 152/373 (40%), Gaps = 87/373 (23%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH 89
E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R++T
Sbjct: 19 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIIT---- 72
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAV-----ANATDNDKKRKEKEECQI 144
L +A+ K A I + + ++ T++ + ++
Sbjct: 73 ------------------LAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRL 114
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAV 204
+VP+SQ ++IGK G IK +R T ++V T + + I+G +++
Sbjct: 115 VVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNST-------ERAITIAGIPQSI 167
Query: 205 KKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGL-----------YP 253
+ + I +M + P+ T+ P PS P+ GG +P
Sbjct: 168 IECVKQICVVMLESPPK-----GVTIPYRPK----PSSSPVIFAGGQDRYSTGSDSASFP 218
Query: 254 NADPIL--------PSRSVPSILGAARVPD-----LQGYADTGNTWPVY--STGLSLVS- 297
+ P + P +I G +P L A + +P+ +TG S +
Sbjct: 219 HTTPSMCLNPDLEGPPLEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSGIES 278
Query: 298 ---------GLVGASQ--SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDT 346
GL ++Q S EL I P + IG +IG+ G I IRQ SGAQI + +
Sbjct: 279 SSPEVKGYWGLDASAQTTSHELTI----PNDLIGCIIGRQGAKINEIRQMSGAQIKIANP 334
Query: 347 KDNRDECVITVTA 359
+ + +T+T
Sbjct: 335 VEGSTDRQVTITG 347
>gi|258574629|ref|XP_002541496.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237901762|gb|EEP76163.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 491
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 105/396 (26%), Positives = 168/396 (42%), Gaps = 81/396 (20%)
Query: 285 TWPVYSTG------LSLVSGLVGASQSEE--LVIRVLCPFNKIGRVIGKGGGTIKSIRQA 336
T P+ ST S G +Q E + IR + + IGKGG + IR+
Sbjct: 101 TQPIQSTASHNDRATSQAPGQSHGTQDETGFIHIRAVISSAEAATCIGKGGENVSQIRRL 160
Query: 337 SGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKINDEDDD--------T 388
SGA+ V D E ++TV+ P D +A L+ +N+E D T
Sbjct: 161 SGAKCTVSDYTRGAVERILTVSG---PQD---AVAKAFGLIIRTLNNEPLDAPSTAQSKT 214
Query: 389 VTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGS 448
+RLL+ +IG IIGKSG I EI++ + A R++ D LV ++G +
Sbjct: 215 YPLRLLIPHILIGSIIGKSGVRIREIQEHSGA--RLNASDSCLPLSTERSLV-ILGVADA 271
Query: 449 VRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSG-------TGISMPPLLPSIPPVG 501
V A + L + L +R G P + + SG G+ + P +P P G
Sbjct: 272 VHIATYYVAATLVEQ-LTERFGG---PAASAYATRSGGPAGVIPGGMQVVPYVPQ-PAGG 326
Query: 502 PLGYD----------QRADSGSGIGM-------------------LSSSSLYGY-GSLSM 531
G+ RA S +G GM ++S GY G+
Sbjct: 327 QYGHPDSFKRHHPQANRAMS-TGYGMPYMQGGPGPSPHAMQQPIHYNASPRQGYTGAGPH 385
Query: 532 GDSPYGSMSSYSSK----------LYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRK 581
+PYG+ S + GG PLT ++ +P + VG +IGK G+ + IR
Sbjct: 386 QPAPYGAPQPPHSHGTPAQPMGAPVAGG---PLTQQIFIPNDMVGAIIGKGGAKINEIRH 442
Query: 582 ISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLI 617
+SG+ I++++ + + +R+ I+GT E + A ++
Sbjct: 443 LSGSVIKINEPQDNSNERLVTITGTQECNQMALYML 478
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 82/377 (21%), Positives = 160/377 (42%), Gaps = 80/377 (21%)
Query: 50 SVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLC 109
+ IGK G+ ++ IR+ + A+ V D GA +R++T+
Sbjct: 145 TCIGKGGENVSQIRRLSGAKCTVSDYTRGAVERILTV----------------------S 182
Query: 110 AAQDALLKVHAAIANAVANATDNDKKRKEKEE--CQILVPSSQSANIIGKAGATIKRLRS 167
QDA+ K I + N + + + ++L+P +IIGK+G I+ ++
Sbjct: 183 GPQDAVAKAFGLIIRTLNNEPLDAPSTAQSKTYPLRLLIPHILIGSIIGKSGVRIREIQE 242
Query: 168 KTRTSIKVTPKDASEPTHSC-AMEFDNFVLISGESEAVKKALFAISA-IMYKFSPREDIP 225
+ + +AS+ SC + + ++I G ++AV A + ++A ++ + + R P
Sbjct: 243 HSGARL-----NASD---SCLPLSTERSLVILGVADAVHIATYYVAATLVEQLTERFGGP 294
Query: 226 LET--TVREAPPSIIIPSDVPI-----YPPGGLY----------PNADPILPS-RSVPSI 267
+ R P+ +IP + + P GG Y P A+ + + +P +
Sbjct: 295 AASAYATRSGGPAGVIPGGMQVVPYVPQPAGGQYGHPDSFKRHHPQANRAMSTGYGMPYM 354
Query: 268 LG-------AARVP------DLQGY--------ADTGNTWPVYSTGLSLVSGLVGASQSE 306
G A + P QGY A G P +S G + +
Sbjct: 355 QGGPGPSPHAMQQPIHYNASPRQGYTGAGPHQPAPYGAPQPPHSHG-TPAQPMGAPVAGG 413
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
L ++ P + +G +IGKGG I IR SG+ I +++ +DN +E ++T+T + + +
Sbjct: 414 PLTQQIFIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQDNSNERLVTITGTQECNQM 473
Query: 367 KSMAVEAVLLLQTKIND 383
A+ +L +++ +
Sbjct: 474 ------ALYMLYSRLGE 484
Score = 39.3 bits (90), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 31/47 (65%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTI 86
+I P+ ++G++IGK G IN IR + + +K+ +P + +R+VTI
Sbjct: 418 QIFIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQDNSNERLVTI 464
>gi|67523265|ref|XP_659693.1| hypothetical protein AN2089.2 [Aspergillus nidulans FGSC A4]
gi|40745765|gb|EAA64921.1| hypothetical protein AN2089.2 [Aspergillus nidulans FGSC A4]
Length = 745
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 94/365 (25%), Positives = 158/365 (43%), Gaps = 65/365 (17%)
Query: 304 QSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESP 363
+S + IR + + VIGKGG + IR+ SGA+ V D E ++TV+ P
Sbjct: 104 ESNWIHIRAVISSQEAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSG---P 160
Query: 364 DDIKSMAVEAVLLLQTKINDEDDD--------TVTIRLLVSSKVIGCIIGKSGSIINEIR 415
D +A L+ +N+E D T +RLL+ +IG IIGK G+ I EI+
Sbjct: 161 QD---AVAKAFGLIIRTLNNEPLDAASTAQSKTYPLRLLIPHILIGSIIGKGGTRIREIQ 217
Query: 416 KRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPP 475
+ A + S P + + LV ++G +V A + + L + L +R G P
Sbjct: 218 DASGARLNASDACLPLSTERS--LV-ILGVADAVHIATYYVAVTLVEQ-LTERFGG---P 270
Query: 476 VGADHIYSS-------GTGISMPPLLPSIPPVGPLGYD---QRADSG---SGIGMLSSSS 522
+ + S G+ + P +P P G G+ +R G +G G
Sbjct: 271 AASAYATRSGGPAGAVPGGMQVVPYVPQ-PAGGQYGHPDTFKRHHPGQARAGAGAYGVPY 329
Query: 523 LYGYGS--------LSMG--DSPYGSMSSYSSKLY------------------GGLPP-- 552
L+G + + G +PY + Y GG P
Sbjct: 330 LHGQHAPAPVAPQPMHYGAPQTPYAGAGPHQPTPYGAPQAAQPRGGPTPAAPVGGAMPGQ 389
Query: 553 PLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRA 612
PLT ++ +P + VG +IGK G+ + IR +SG+ I++++ + + +R+ I+GT E +
Sbjct: 390 PLTQQIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQENSNERLVTITGTQECNQM 449
Query: 613 AENLI 617
A ++
Sbjct: 450 ALYML 454
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 84/382 (21%), Positives = 154/382 (40%), Gaps = 79/382 (20%)
Query: 26 NEKDEKGNEESVIY-RILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVV 84
+E+ +E + I+ R + +VIGK G+ ++ IR+ + A+ V D GA +R++
Sbjct: 96 SEQQRPQDESNWIHIRAVISSQEAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAVERIL 155
Query: 85 TIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEE--C 142
T+ QDA+ K I + N + + +
Sbjct: 156 TV----------------------SGPQDAVAKAFGLIIRTLNNEPLDAASTAQSKTYPL 193
Query: 143 QILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESE 202
++L+P +IIGK G I+ ++ + + + DA P + + ++I G ++
Sbjct: 194 RLLIPHILIGSIIGKGGTRIREIQDASGARLNAS--DACLP-----LSTERSLVILGVAD 246
Query: 203 AVKKALFAIS-AIMYKFSPREDIPLETTVREAPPSI---------IIPSDVPIYPPGGLY 252
AV A + ++ ++ + + R P + ++P VP P GG Y
Sbjct: 247 AVHIATYYVAVTLVEQLTERFGGPAASAYATRSGGPAGAVPGGMQVVPY-VP-QPAGGQY 304
Query: 253 PNADPILPSRSVP----SILGAARVPDLQG--------------------YADTGNTWPV 288
+ D R P + GA VP L G YA G P
Sbjct: 305 GHPDTF--KRHHPGQARAGAGAYGVPYLHGQHAPAPVAPQPMHYGAPQTPYAGAGPHQPT 362
Query: 289 -YST--------GLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGA 339
Y G + + + GA + L ++ P + +G +IGKGG I IR SG+
Sbjct: 363 PYGAPQAAQPRGGPTPAAPVGGAMPGQPLTQQIYIPNDMVGAIIGKGGAKINEIRHLSGS 422
Query: 340 QIDVDDTKDNRDECVITVTAIE 361
I +++ ++N +E ++T+T +
Sbjct: 423 VIKINEPQENSNERLVTITGTQ 444
>gi|300795407|ref|NP_001179433.1| insulin-like growth factor 2 mRNA-binding protein 2 [Bos taurus]
gi|296491332|tpg|DAA33395.1| TPA: insulin-like growth factor 2 mRNA binding protein 2 isoform 1
[Bos taurus]
Length = 599
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 153/333 (45%), Gaps = 41/333 (12%)
Query: 301 GASQSEE--LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
G+SQ+ + +R+L P +G +IGK G TIK+I + + +++D+ K+N VT
Sbjct: 185 GSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHR-KENSGAAEKPVT 243
Query: 359 AIESPDDIKSMAVEAVLLLQTKINDEDD--DTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
+P+ S A +L + K DE + + +++L + ++G +IGK G + +I
Sbjct: 244 IHATPEGT-SEACRMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEH 302
Query: 417 RTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPV 476
T + IS + + + V G V + +A ++I+ +LR+ A ++ + N
Sbjct: 303 ETGTKITISSLQDLSIYNP-ERTITVKGTVEACANAEIEIMKKLRE-AFENDMLAVNQQA 360
Query: 477 GADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPY 536
L+P + + LG +G+ +L + + P+
Sbjct: 361 N---------------LIPGLN-LSALGI-----FSTGLSVLPPPAGPRGAPPAPPYHPF 399
Query: 537 GSMSSYSSKLY-----------GGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGA 585
+ S Y S LY P + + +P AVG +IGK G+++ + + +GA
Sbjct: 400 ATHSGYFSSLYPPHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGA 459
Query: 586 TIEMSDSKS-SRGDRVALISGTPEQKRAAENLI 617
+I+++ ++ +R+ +I+G PE + A+ I
Sbjct: 460 SIKIAPAEGPDVSERMVIITGPPEAQFKAQGRI 492
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 89/396 (22%), Positives = 156/396 (39%), Gaps = 97/396 (24%)
Query: 142 CQILVPSSQSANIIGKAGATIKRLRSKTRT-----------------SIKVTPKDASEPT 184
+ILVP+ IIGK G TIK + +T++ +I TP+ SE
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTSE-- 253
Query: 185 HSCAMEFDNFVLISGESEAVKKA------LFAISAIMYKFSPREDIPLETTVREAPPSII 238
+C M + ++ E++ K A + A + ++ + +E L+ E I
Sbjct: 254 -ACRMILE---IMQKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKIT 309
Query: 239 IPS--DVPIYPP-------GGLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTWP-- 287
I S D+ IY P G + A+ + + L A D+ N P
Sbjct: 310 ISSLQDLSIYNPERTITVKGTVEACANAEI---EIMKKLREAFENDMLAVNQQANLIPGL 366
Query: 288 ------VYSTGLSLV---------------------SGLVGA--------------SQSE 306
++STGLS++ SG + S E
Sbjct: 367 NLSALGIFSTGLSVLPPPAGPRGAPPAPPYHPFATHSGYFSSLYPPHQFGPFPHHHSYPE 426
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTK--DNRDECVITVTAIESPD 364
+ ++ + P +G +IGK G IK + + +GA I + + D + VI I P
Sbjct: 427 QEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVI----ITGPP 482
Query: 365 DIKSMA---VEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKAD 421
+ + A + L + N +++ + + V S G +IGK G +NE++ T A+
Sbjct: 483 EAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAE 542
Query: 422 VRISKGDKPKCADANDE-LVEVVGEVGSVRDALVQI 456
V + + P D N+E +V ++G + + A +I
Sbjct: 543 VIVPRDQTP---DENEEVIVRIIGHFFASQTAQRKI 575
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 58/148 (39%), Gaps = 24/148 (16%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPF-PGAKDRVVTIYSHVKDK 93
E I + P +G++IGK G I + + A +K+ P +R+V I
Sbjct: 426 EQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII------- 478
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
+A K I + + K + K E I VPSS +
Sbjct: 479 ---------------TGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGR 523
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+IGK G T+ L++ T + + P+D +
Sbjct: 524 VIGKGGKTVNELQNLTSAEV-IVPRDQT 550
Score = 38.9 bits (89), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 63/138 (45%), Gaps = 24/138 (17%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKEDVEV 98
RIL P +G++IGK G I +I ++T++RV + GA ++ VTI++
Sbjct: 197 RILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHA---------- 246
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
E A +L++ A ++ K E+ +IL + +IGK
Sbjct: 247 -----TPEGTSEACRMILEIMQKEA--------DETKLAEEIPLKILAHNGLVGRLIGKE 293
Query: 159 GATIKRLRSKTRTSIKVT 176
G +K++ +T T I ++
Sbjct: 294 GRNLKKIEHETGTKITIS 311
>gi|47220208|emb|CAF98973.1| unnamed protein product [Tetraodon nigroviridis]
Length = 345
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 147/352 (41%), Gaps = 73/352 (20%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDD-- 365
L IR+L ++G +IGK G T+K +R+ SGA+I++ + N E ++T+T P D
Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG---PTDTI 70
Query: 366 IKSMAVEAVLLLQTKINDEDDDT------VTIRLLVSSKVIGCIIGKSGSIINE------ 413
K+ A+ A + IN + VT+RL+V + G +IGK GS I E
Sbjct: 71 FKAFAMIAYKFEEDIINSMSNSLATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMREAEL 130
Query: 414 ---IRKRTKADVRISKGDK------PKCAD----ANDELVEVVGEVGSVRDALVQIILRL 460
I++ +D+ K PK A V+ G VR
Sbjct: 131 LCVIKEGISSDIFFCMCVKSVTASPPKGATIPYRPKPASTPVIFSGGQVRA--------- 181
Query: 461 RDDALKDR------DGSRNPPVGADHIYSSGTGISMPPLLPSI-------PPVGPLGYDQ 507
+ AL+ R + + N PV + + I P L + P PLG
Sbjct: 182 -EPALQHRCYFHTVNANENRPVSSAYTIQGPYAIPHPDQLTKLHQLAMQQTPFTPLGQTT 240
Query: 508 RADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGK 567
A LS +S ++ S PP T E+ +P + +G
Sbjct: 241 PAFPA----FLSQTSFL--------------VAFVSDPGLDATPPASTHELTIPNDLIGC 282
Query: 568 VIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQA 619
+IG+ G+ + IR++SGA I+++++ +R I+GTP A+ LI A
Sbjct: 283 IIGRQGTKINEIRQMSGAQIKIANAMEGSSERQITITGTPANISLAQYLINA 334
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+TIRLL+ K +G IIGK G + ++R+ + A + IS+G+ P + +V + G
Sbjct: 15 TLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCP------ERIVTITGPTD 68
Query: 448 SVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
++ A I + +D ++ + + PPV
Sbjct: 69 TIFKAFAMIAYKFEEDIINSMSNSLATSKPPV 100
Score = 46.6 bits (109), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 64/144 (44%), Gaps = 29/144 (20%)
Query: 28 KDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIY 87
+ E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R+VTI
Sbjct: 7 QPEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTI- 63
Query: 88 SHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANA----VANATDND-KKRKEKEEC 142
D + K A IA + N+ N K
Sbjct: 64 ---------------------TGPTDTIFKAFAMIAYKFEEDIINSMSNSLATSKPPVTL 102
Query: 143 QILVPSSQSANIIGKAGATIKRLR 166
+++VP+SQ ++IGK G+ IK +R
Sbjct: 103 RLVVPASQCGSLIGKGGSKIKEMR 126
Score = 42.4 bits (98), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 45/99 (45%), Gaps = 17/99 (17%)
Query: 279 YADTGNTWPVYSTGLSLVSGLVG-----------ASQSEELVIRVLCPFNKIGRVIGKGG 327
+ G T P + LS S LV + + EL I P + IG +IG+ G
Sbjct: 233 FTPLGQTTPAFPAFLSQTSFLVAFVSDPGLDATPPASTHELTI----PNDLIGCIIGRQG 288
Query: 328 GTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
I IRQ SGAQI + + + E IT+T +P +I
Sbjct: 289 TKINEIRQMSGAQIKIANAMEGSSERQITITG--TPANI 325
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 31/48 (64%)
Query: 39 YRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTI 86
+ + P+ +IG +IG+ G IN IRQ + A++K+ + G+ +R +TI
Sbjct: 271 HELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAMEGSSERQITI 318
>gi|77736367|ref|NP_001029883.1| poly(rC)-binding protein 2 [Bos taurus]
gi|157057549|ref|NP_035172.2| poly(rC)-binding protein 2 isoform 2 [Mus musculus]
gi|291389257|ref|XP_002711065.1| PREDICTED: poly(rC) binding protein 2-like isoform 2 [Oryctolagus
cuniculus]
gi|348581077|ref|XP_003476304.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Cavia porcellus]
gi|426224370|ref|XP_004006344.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Ovis aries]
gi|74268197|gb|AAI03398.1| Poly(rC) binding protein 2 [Bos taurus]
gi|119617114|gb|EAW96708.1| poly(rC) binding protein 2, isoform CRA_c [Homo sapiens]
gi|148672028|gb|EDL03975.1| poly(rC) binding protein 2, isoform CRA_b [Mus musculus]
gi|149031923|gb|EDL86835.1| rCG50739, isoform CRA_d [Rattus norvegicus]
gi|296487920|tpg|DAA30033.1| TPA: poly(rC) binding protein 2 [Bos taurus]
Length = 349
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 162/349 (46%), Gaps = 44/349 (12%)
Query: 297 SGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVIT 356
+G++ + L IR+L ++G +IGK G ++K +R+ SGA+I++ + N E +IT
Sbjct: 3 TGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIIT 60
Query: 357 VTAIESPDDIKSMAVEAVL-LLQTKINDEDDDT-------VTIRLLVSSKVIGCIIGKSG 408
+ P + A ++ L+ I+ ++ VT+RL+V + G +IGK G
Sbjct: 61 LAG---PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGG 117
Query: 409 SIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKD- 467
I EIR+ T A V+++ P ++ + + + G S+ + + QI + + + K
Sbjct: 118 CKIKEIRESTGAQVQVAGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLESPPKGV 174
Query: 468 ----RDGSRNPPV---GADHIYSSGT-GISMPPLLPSI--------PPVGPLGYDQRADS 511
R + PV G YS+G+ S P PS+ PP+ A +
Sbjct: 175 TIPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPL-------EAYT 227
Query: 512 GSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGL---PPPLTLEVLVPANAVGKV 568
G + L L+M S + M+ ++ GL + E+ +P + +G +
Sbjct: 228 IQGQYAIPQPDLTKLHQLAMQQSHF-PMTHGNTGFSAGLDASAQTTSHELTIPNDLIGCI 286
Query: 569 IGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLI 617
IG+ G+ + IR++SGA I++++ DR I+G+ A+ LI
Sbjct: 287 IGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLI 335
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 81/360 (22%), Positives = 148/360 (41%), Gaps = 75/360 (20%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH 89
E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R++T
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIIT---- 60
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAV-----ANATDNDKKRKEKEECQI 144
L +A+ K A I + + ++ T++ + ++
Sbjct: 61 ------------------LAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRL 102
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAV 204
+VP+SQ ++IGK G IK +R T ++V T + + I+G +++
Sbjct: 103 VVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNST-------ERAITIAGIPQSI 155
Query: 205 KKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGL-----------YP 253
+ + I +M + P+ T+ P PS P+ GG +P
Sbjct: 156 IECVKQICVVMLESPPK-----GVTIPYRPK----PSSSPVIFAGGQDRYSTGSDSASFP 206
Query: 254 NADPIL--------PSRSVPSILGAARVPD-----LQGYADTGNTWPVYSTGLSLVSGLV 300
+ P + P +I G +P L A + +P+ +GL
Sbjct: 207 HTTPSMCLNPDLEGPPLEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSAGLD 266
Query: 301 GASQ--SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
++Q S EL I P + IG +IG+ G I IRQ SGAQI + + + + +T+T
Sbjct: 267 ASAQTTSHELTI----PNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTIT 322
>gi|218184819|gb|EEC67246.1| hypothetical protein OsI_34185 [Oryza sativa Indica Group]
Length = 470
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 67/97 (69%), Gaps = 2/97 (2%)
Query: 347 KDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKIND-EDDDTVTIRLLVSSKVIGCIIG 405
K+ +E +I V++ E PDD S +EA++LL +K++ ++ +T RL+V S +GCI+G
Sbjct: 219 KNASEERLIVVSSQEIPDDPVSPTIEALILLHSKVSTLAENHQLTTRLVVPSNKVGCILG 278
Query: 406 KSGSIINEIRKRTKADVRI-SKGDKPKCADANDELVE 441
+ G +I E+R+RT A++R+ SK DKPK ++ELV+
Sbjct: 279 EGGKVITEMRRRTGAEIRVYSKADKPKYLSFDEELVQ 315
Score = 38.9 bits (89), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 30/46 (65%)
Query: 303 SQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD 348
+++ +L R++ P NK+G ++G+GG I +R+ +GA+I V D
Sbjct: 257 AENHQLTTRLVVPSNKVGCILGEGGKVITEMRRRTGAEIRVYSKAD 302
>gi|126341837|ref|XP_001363414.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
[Monodelphis domestica]
Length = 586
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 152/326 (46%), Gaps = 43/326 (13%)
Query: 298 GLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITV 357
G G + ++ +R+L P +G +IGK G TI++I + + ++ID+ K+N +
Sbjct: 188 GASGQNHQNDVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDI-HRKENAGASEKPI 246
Query: 358 TAIESPDDIKSMAVEAVLLLQTKINDED-DDTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
T SP+ + + ++Q + D D + +++L + +G +IGK G + +I +
Sbjct: 247 TIHASPEGCSTACKIIMEIMQKEAQDTKFTDEIPLKILAHNNFVGRLIGKEGRNLKKIEQ 306
Query: 417 RTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPV 476
T + IS + + + + V G + + A +I+ ++R+ D +
Sbjct: 307 DTDTKITISPLQELTLYNP-ERTITVKGSIETCGKAEEEIMKKIRESYESD--------L 357
Query: 477 GADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSG----SGIGMLSSSSLYGYGSLSMG 532
A ++ + LLP + + LG + SG S +G+ S+++ Y
Sbjct: 358 SAMNLQAH--------LLPGL-NLNALGLFPASTSGIPSPSTLGVPSAAAATNY------ 402
Query: 533 DSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDS 592
PYG + T+ + +PA AVG +IGK G ++ + + +GA+I+++
Sbjct: 403 -LPYGQQAETE-----------TVHLFIPAMAVGAIIGKMGQHIKQLSRFAGASIKIAPP 450
Query: 593 KSSRG-DRVALISGTPEQKRAAENLI 617
++ +R+ +I+G PE + A+ I
Sbjct: 451 ETPDAKERMVIITGPPEAQFKAQGRI 476
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 95/437 (21%), Positives = 177/437 (40%), Gaps = 80/437 (18%)
Query: 31 KGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSH 89
+ ++ V R+L P +G++IGK G I +I ++T++++ + GA ++ +TI++
Sbjct: 192 QNHQNDVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGASEKPITIHA- 250
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSS 149
E A ++++ A D K ++ +IL ++
Sbjct: 251 --------------SPEGCSTACKIIMEIMQKEAQ--------DTKFTDEIPLKILAHNN 288
Query: 150 QSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALF 209
+IGK G +K++ T T I ++P + + + G E KA
Sbjct: 289 FVGRLIGKEGRNLKKIEQDTDTKITISPLQ-----ELTLYNPERTITVKGSIETCGKAE- 342
Query: 210 AISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSV----P 265
IM K +RE+ S + ++ + GL NA + P+ + P
Sbjct: 343 --EEIMKK------------IRESYESDLSAMNLQAHLLPGLNLNALGLFPASTSGIPSP 388
Query: 266 SILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGK 325
S LG Y G Q+E + + P +G +IGK
Sbjct: 389 STLGVPSAAAATNYLPYGQ-------------------QAETETVHLFIPAMAVGAIIGK 429
Query: 326 GGGTIKSIRQASGAQIDVD--DTKDNRDECVITVTAIESPDDIKSMA---VEAVLLLQTK 380
G IK + + +GA I + +T D ++ VI I P + + A + L +
Sbjct: 430 MGQHIKQLSRFAGASIKIAPPETPDAKERMVI----ITGPPEAQFKAQGRIYGKLKEENF 485
Query: 381 INDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDE-L 439
+++ + ++ V S G +IGK G +NE++ T A+V + + P D NDE +
Sbjct: 486 FGPKEEVKLEAQIKVPSYAAGRVIGKGGKTVNELQNLTSAEVVVPRDQIP---DENDEVI 542
Query: 440 VEVVGEVGSVRDALVQI 456
V++ G + + A +I
Sbjct: 543 VKITGHFYACQLAQRKI 559
>gi|390474894|ref|XP_002758191.2| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 3 [Callithrix jacchus]
Length = 1052
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 150/333 (45%), Gaps = 41/333 (12%)
Query: 301 GASQSEE--LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
G+SQ+ + +R+L P +G +IGK G TIK+I + + +++D+ K+N VT
Sbjct: 638 GSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHR-KENSGAAEKPVT 696
Query: 359 AIESPDDIKSMAVEAVLLLQTKINDEDD--DTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
+P+ S A +L + K DE + + +++L + ++G +IGK G + +I
Sbjct: 697 IHATPEGT-SEACRMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEH 755
Query: 417 RTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPV 476
T + IS + + + V G V + A ++I+ +LR+ D +
Sbjct: 756 ETGTKITISSLQDLSIYNP-ERTITVKGTVEACACAEIEIMKKLREAFENDM-------L 807
Query: 477 GADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPY 536
+ + G+++ L +G+ +LS + + P+
Sbjct: 808 AVNQQANLIPGLNLSAL---------------GIFSTGLSVLSPPAGPRGAPPAAPYHPF 852
Query: 537 GSMSSYSSKLY-----------GGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGA 585
+ S Y S LY P + + +P AVG +IGK G+++ + + +GA
Sbjct: 853 ATHSGYFSSLYPHHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGA 912
Query: 586 TIEMSDSKSSR-GDRVALISGTPEQKRAAENLI 617
+I+++ ++ +R+ +I+G PE + A+ I
Sbjct: 913 SIKIAPAEGPDVSERMVIITGPPEAQFKAQGRI 945
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 76/160 (47%), Gaps = 13/160 (8%)
Query: 303 SQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTK--DNRDECVITVTAI 360
S E+ ++ + P +G +IGK G IK + + +GA I + + D + VI I
Sbjct: 876 SYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVI----I 931
Query: 361 ESPDDIKSMA---VEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKR 417
P + + A + L + N +++ + + V S G +IGK G +NE++
Sbjct: 932 TGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNL 991
Query: 418 TKADVRISKGDKPKCADANDE-LVEVVGEVGSVRDALVQI 456
T A+V + + P D N+E +V ++G + + A +I
Sbjct: 992 TSAEVIVPRDQTP---DENEEVIVRIIGHFFASQTAQRKI 1028
Score = 43.5 bits (101), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 10/97 (10%)
Query: 138 EKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLI 197
E+E + +P+ IIGK GA IK+L SIK+ P + + + + V+I
Sbjct: 879 EQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVS-------ERMVII 931
Query: 198 SGESEAVKKALFAISAIMYK---FSPREDIPLETTVR 231
+G EA KA I + + F+P+E++ LE +R
Sbjct: 932 TGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIR 968
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 58/148 (39%), Gaps = 24/148 (16%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPF-PGAKDRVVTIYSHVKDK 93
E I + P +G++IGK G I + + A +K+ P +R+V I
Sbjct: 879 EQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII------- 931
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
+A K I + + K + K E I VPSS +
Sbjct: 932 ---------------TGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGR 976
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+IGK G T+ L++ T + + P+D +
Sbjct: 977 VIGKGGKTVNELQNLTSAEV-IVPRDQT 1003
>gi|4191610|gb|AAD09827.1| IGF-II mRNA-binding protein 2 [Homo sapiens]
gi|18204201|gb|AAH21290.1| Insulin-like growth factor 2 mRNA binding protein 2 [Homo sapiens]
gi|123982692|gb|ABM83087.1| insulin-like growth factor 2 mRNA binding protein 2 [synthetic
construct]
gi|157928388|gb|ABW03490.1| insulin-like growth factor 2 mRNA binding protein 2 [synthetic
construct]
Length = 598
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 152/333 (45%), Gaps = 41/333 (12%)
Query: 301 GASQSEE--LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
G SQ+ + +R+L P +G +IGK G TIK+I + + +++D+ K+N VT
Sbjct: 184 GTSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHR-KENSGAAEKPVT 242
Query: 359 AIESPDDIKSMAVEAVLLLQTKINDEDD--DTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
+P+ S A +L + K DE + + +++L + ++G +IGK G + +I
Sbjct: 243 IHATPEGT-SEACRMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEH 301
Query: 417 RTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPV 476
T + IS + + + V G V + A ++I+ +LR+ A ++ + N
Sbjct: 302 ETGTKITISSLQDLSIYNP-ERTITVKGTVEACASAEIEIMKKLRE-AFENDMLAVNQQA 359
Query: 477 GADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPY 536
L+P + + LG +G+ +LS + + P+
Sbjct: 360 N---------------LIPGLN-LSALGI-----FSTGLSVLSPPAGPRGAPPAAPYHPF 398
Query: 537 GSMSSYSSKLY-----------GGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGA 585
+ S Y S LY P + + +P AVG +IGK G+++ + + +GA
Sbjct: 399 TTHSGYFSSLYPHHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGA 458
Query: 586 TIEMSDSKS-SRGDRVALISGTPEQKRAAENLI 617
+I+++ ++ +R+ +I+G PE + A+ I
Sbjct: 459 SIKIAPAEGPDVSERMVIITGPPEAQFKAQGRI 491
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 88/393 (22%), Positives = 153/393 (38%), Gaps = 91/393 (23%)
Query: 142 CQILVPSSQSANIIGKAGATIKRLRSKTRT-----------------SIKVTPKDASEPT 184
+ILVP+ IIGK G TIK + +T++ +I TP+ SE
Sbjct: 195 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTSE-- 252
Query: 185 HSCAMEFDNFVLISGESEAVKKA------LFAISAIMYKFSPREDIPLETTVREAPPSII 238
+C M + ++ E++ K A + A + ++ + +E L+ E I
Sbjct: 253 -ACRMILE---IMQKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKIT 308
Query: 239 IPS--DVPIYPPGGLYPNADPILPSRS----VPSILGAARVPDLQGYADTGNTWP----- 287
I S D+ IY P + S + L A D+ N P
Sbjct: 309 ISSLQDLSIYNPERTITVKGTVEACASAEIEIMKKLREAFENDMLAVNQQANLIPGLNLS 368
Query: 288 ---VYSTGLSLVS---------------------GLVGA--------------SQSEELV 309
++STGLS++S G + S E+ +
Sbjct: 369 ALGIFSTGLSVLSPPAGPRGAPPAAPYHPFTTHSGYFSSLYPHHQFGPFPHHHSYPEQEI 428
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTK--DNRDECVITVTAIESPDDIK 367
+ + P +G +IGK G IK + + +GA I + + D + VI I P + +
Sbjct: 429 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVI----ITGPPEAQ 484
Query: 368 SMA---VEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRI 424
A + L + N +++ + + V S G +IGK G +NE++ T A+V +
Sbjct: 485 FKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEVIV 544
Query: 425 SKGDKPKCADANDE-LVEVVGEVGSVRDALVQI 456
+ P D N+E +V ++G + + A +I
Sbjct: 545 PRDQTP---DENEEVIVRIIGHFFASQTAQRKI 574
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 10/97 (10%)
Query: 138 EKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLI 197
E+E + +P+ IIGK GA IK+L SIK+ P + + + + V+I
Sbjct: 425 EQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVS-------ERMVII 477
Query: 198 SGESEAVKKALFAISAIMYK---FSPREDIPLETTVR 231
+G EA KA I + + F+P+E++ LE +R
Sbjct: 478 TGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIR 514
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 58/148 (39%), Gaps = 24/148 (16%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPF-PGAKDRVVTIYSHVKDK 93
E I + P +G++IGK G I + + A +K+ P +R+V I
Sbjct: 425 EQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII------- 477
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
+A K I + + K + K E I VPSS +
Sbjct: 478 ---------------TGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGR 522
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+IGK G T+ L++ T + + P+D +
Sbjct: 523 VIGKGGKTVNELQNLTSAEV-IVPRDQT 549
>gi|444519891|gb|ELV12903.1| Poly(rC)-binding protein 3 [Tupaia chinensis]
Length = 300
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 134/293 (45%), Gaps = 38/293 (12%)
Query: 337 SGAQIDVDDTKDNRDECVITVTAIESPDD--IKSMAVEAVLLLQTKINDEDDDT------ 388
SGA+I++ + N E ++T+T P D K+ A+ A + IN +
Sbjct: 24 SGARINISE--GNCPERIVTITG---PTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPP 78
Query: 389 VTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGS 448
VT+RL+V + G +IGK GS I EIR+ T A V+++ P ++ + V + G
Sbjct: 79 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLP---NSTERAVTISG---- 131
Query: 449 VRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQR 508
DA++Q + ++ L+ +PP GA Y P+ PV G
Sbjct: 132 TPDAIIQCVKQICVVMLE------SPPKGATIPYRPK---------PASTPVIFAGGQAY 176
Query: 509 ADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYG--GLPPPLTLEVLVPANAVG 566
G + L L+M +P+ + + G PP T E+ +P + +G
Sbjct: 177 TIQGQ-YAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGLDASPPASTHELTIPNDLIG 235
Query: 567 KVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQA 619
+IG+ G+ + IR++SGA I+++++ +R I+GTP A+ LI A
Sbjct: 236 CIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINA 288
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 107/254 (42%), Gaps = 35/254 (13%)
Query: 113 DALLKVHAAIA-----NAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRS 167
DA+ K A IA + + + +++ K +++VP+SQ ++IGK G+ IK +R
Sbjct: 47 DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRE 106
Query: 168 KTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPR-EDIPL 226
T ++V T + V ISG +A+ + + I +M + P+ IP
Sbjct: 107 STGAQVQVAGDMLPNST-------ERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPY 159
Query: 227 ETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTW 286
P+ P+ GG A I ++P ++ L A +
Sbjct: 160 RPK----------PASTPVIFAGG---QAYTIQGQYAIPH---PDQLTKLHQLAMQQTPF 203
Query: 287 PVYSTGLSLVSGLVGA--SQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVD 344
P GL + + + EL I P + IG +IG+ G I IRQ SGAQI +
Sbjct: 204 PPLGQTNPAFPGLDASPPASTHELTI----PNDLIGCIIGRQGTKINEIRQMSGAQIKIA 259
Query: 345 DTKDNRDECVITVT 358
+ + E IT+T
Sbjct: 260 NATEGSSERQITIT 273
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 40/66 (60%), Gaps = 3/66 (4%)
Query: 302 ASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDV-DDTKDNRDECVITVTAI 360
A+ + +R++ P ++ G +IGKGG IK IR+++GAQ+ V D N E +T++
Sbjct: 73 ATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISG- 131
Query: 361 ESPDDI 366
+PD I
Sbjct: 132 -TPDAI 136
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 31/48 (64%)
Query: 39 YRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTI 86
+ + P+ +IG +IG+ G IN IRQ + A++K+ + G+ +R +TI
Sbjct: 225 HELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITI 272
Score = 39.3 bits (90), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 37 VIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTI 86
V R++ P GS+IGK G I IR+ T A+V+V D P + +R VTI
Sbjct: 79 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTI 129
>gi|332818640|ref|XP_001151234.2| PREDICTED: LOW QUALITY PROTEIN: insulin-like growth factor 2 mRNA
binding protein 2 isoform 7 [Pan troglodytes]
Length = 599
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 152/333 (45%), Gaps = 41/333 (12%)
Query: 301 GASQSEE--LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
G SQ+ + +R+L P +G +IGK G TIK+I + + +++D+ K+N VT
Sbjct: 185 GTSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHR-KENSGAAEKPVT 243
Query: 359 AIESPDDIKSMAVEAVLLLQTKINDEDD--DTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
+P+ S A +L + K DE + + +++L + ++G +IGK G + +I
Sbjct: 244 IHATPEGT-SEACRMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEH 302
Query: 417 RTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPV 476
T + IS + + + V G V + A ++I+ +LR+ A ++ + N
Sbjct: 303 ETGTKITISSLQDLSIYNP-ERTITVKGTVEACASAEIEIMKKLRE-AFENDMLAVNQQA 360
Query: 477 GADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPY 536
L+P + + LG +G+ +LS + + P+
Sbjct: 361 N---------------LIPGLN-LSALGI-----FSTGLSVLSPPAGPRGAPPAAPYHPF 399
Query: 537 GSMSSYSSKLY-----------GGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGA 585
+ S Y S LY P + + +P AVG +IGK G+++ + + +GA
Sbjct: 400 TTHSGYFSSLYPHHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGA 459
Query: 586 TIEMSDSKS-SRGDRVALISGTPEQKRAAENLI 617
+I+++ ++ +R+ +I+G PE + A+ I
Sbjct: 460 SIKIAPAEGPDVSERMVIITGPPEAQFKAQGRI 492
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 88/393 (22%), Positives = 153/393 (38%), Gaps = 91/393 (23%)
Query: 142 CQILVPSSQSANIIGKAGATIKRLRSKTRT-----------------SIKVTPKDASEPT 184
+ILVP+ IIGK G TIK + +T++ +I TP+ SE
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTSE-- 253
Query: 185 HSCAMEFDNFVLISGESEAVKKA------LFAISAIMYKFSPREDIPLETTVREAPPSII 238
+C M + ++ E++ K A + A + ++ + +E L+ E I
Sbjct: 254 -ACRMILE---IMQKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKIT 309
Query: 239 IPS--DVPIYPPGGLYPNADPILPSRS----VPSILGAARVPDLQGYADTGNTWP----- 287
I S D+ IY P + S + L A D+ N P
Sbjct: 310 ISSLQDLSIYNPERTITVKGTVEACASAEIEIMKKLREAFENDMLAVNQQANLIPGLNLS 369
Query: 288 ---VYSTGLSLVS---------------------GLVGA--------------SQSEELV 309
++STGLS++S G + S E+ +
Sbjct: 370 ALGIFSTGLSVLSPPAGPRGAPPAAPYHPFTTHSGYFSSLYPHHQFGPFPHHHSYPEQEI 429
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTK--DNRDECVITVTAIESPDDIK 367
+ + P +G +IGK G IK + + +GA I + + D + VI I P + +
Sbjct: 430 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVI----ITGPPEAQ 485
Query: 368 SMA---VEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRI 424
A + L + N +++ + + V S G +IGK G +NE++ T A+V +
Sbjct: 486 FKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEVIV 545
Query: 425 SKGDKPKCADANDE-LVEVVGEVGSVRDALVQI 456
+ P D N+E +V ++G + + A +I
Sbjct: 546 PRDQTP---DENEEVIVRIIGHFFASQTAQRKI 575
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 10/97 (10%)
Query: 138 EKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLI 197
E+E + +P+ IIGK GA IK+L SIK+ P + + + + V+I
Sbjct: 426 EQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVS-------ERMVII 478
Query: 198 SGESEAVKKALFAISAIMYK---FSPREDIPLETTVR 231
+G EA KA I + + F+P+E++ LE +R
Sbjct: 479 TGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIR 515
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 58/148 (39%), Gaps = 24/148 (16%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPF-PGAKDRVVTIYSHVKDK 93
E I + P +G++IGK G I + + A +K+ P +R+V I
Sbjct: 426 EQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII------- 478
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
+A K I + + K + K E I VPSS +
Sbjct: 479 ---------------TGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGR 523
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+IGK G T+ L++ T + + P+D +
Sbjct: 524 VIGKGGKTVNELQNLTSAEV-IVPRDQT 550
>gi|428183593|gb|EKX52450.1| hypothetical protein GUITHDRAFT_101621 [Guillardia theta CCMP2712]
Length = 358
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 145/337 (43%), Gaps = 49/337 (14%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDN----RDECVITVTAIES 362
++ +++L G VIGK G TI SI+ SGA++ V + D V+ +E+
Sbjct: 35 QMALKILIGNKSAGSVIGKAGATINSIKDTSGAKVKVSSNSETFPGTADRIVLISGKVET 94
Query: 363 PDDIKSMAVEAVLL--LQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKA 420
M + + ++ D+ + +T+ +++ + G +IGK G IN +R+ T+A
Sbjct: 95 VLSAAKMVISEMYRDPNSGRVPDDVNAVMTVSIVIPAAACGLVIGKGGEKINSLREETQA 154
Query: 421 DVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADH 480
+++ DK N+ +V + G + + A+ +I+ + +D R +G ++
Sbjct: 155 KIQLQAKDKVAIPGLNERIVTIQGTLPQAQTAVEKIVHLIHEDG-----NIRYENLGTNY 209
Query: 481 IYS--------SGTGISMPPLLPSIPPVG----PLGYDQRADSGSGI-----GMLSSSSL 523
S G G+ M P+ + G P+G D A G G+ G++
Sbjct: 210 GMSGMMGKGLGQGYGMGMMPMQGAAAMYGGMQMPMGMDM-ASQGMGMAPGMPGVVPGQEY 268
Query: 524 YGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKIS 583
+G +G + L++ + +AVG ++GK G NL +S
Sbjct: 269 WGMSQHGLGTDMH-----------------TVLKLSITDDAVGPLLGKGGCNLKEYISVS 311
Query: 584 GATIEMS---DSKSSRGDRVALISGTPEQKRAAENLI 617
GA I++S D+ +R I GT + A+ L+
Sbjct: 312 GANIKVSQRGDTIPGTNNRYITIQGTAAAVQYAQLLV 348
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 129/331 (38%), Gaps = 53/331 (16%)
Query: 32 GNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV---DPFPGAKDRVVTIYS 88
G+E + +IL + GSVIGK+G INSI+ + A+VKV + FPG DR+V I
Sbjct: 31 GDETQMALKILIGNKSAGSVIGKAGATINSIKDTSGAKVKVSSNSETFPGTADRIVLISG 90
Query: 89 HVK---DKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQIL 145
V+ + + + + D D NAV + I+
Sbjct: 91 KVETVLSAAKMVISEMYRDPNSGRVPDDV---------NAVMTVS-------------IV 128
Query: 146 VPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKD-ASEPTHSCAMEFDNFVLISGESEAV 204
+P++ +IGK G I LR +T+ I++ KD + P + + V I G +
Sbjct: 129 IPAAACGLVIGKGGEKINSLREETQAKIQLQAKDKVAIPGLN-----ERIVTIQG---TL 180
Query: 205 KKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYP--NADPILPSR 262
+A A+ I++ +I E S ++ + G+ P A +
Sbjct: 181 PQAQTAVEKIVHLIHEDGNIRYENLGTNYGMSGMMGKGLGQGYGMGMMPMQGAAAMYGGM 240
Query: 263 SVPSIL-----GAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFN 317
+P + G P + G W + GL V+++ +
Sbjct: 241 QMPMGMDMASQGMGMAPGMPGVVPGQEYWGMSQHGL---------GTDMHTVLKLSITDD 291
Query: 318 KIGRVIGKGGGTIKSIRQASGAQIDVDDTKD 348
+G ++GKGG +K SGA I V D
Sbjct: 292 AVGPLLGKGGCNLKEYISVSGANIKVSQRGD 322
>gi|64085377|ref|NP_006539.3| insulin-like growth factor 2 mRNA-binding protein 2 isoform a [Homo
sapiens]
gi|224471831|sp|Q9Y6M1.2|IF2B2_HUMAN RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 2;
Short=IGF2 mRNA-binding protein 2; Short=IMP-2; AltName:
Full=Hepatocellular carcinoma autoantigen p62; AltName:
Full=IGF-II mRNA-binding protein 2; AltName: Full=VICKZ
family member 2
gi|119598617|gb|EAW78211.1| insulin-like growth factor 2 mRNA binding protein 2, isoform CRA_c
[Homo sapiens]
gi|158254760|dbj|BAF83353.1| unnamed protein product [Homo sapiens]
gi|410223074|gb|JAA08756.1| insulin-like growth factor 2 mRNA binding protein 2 [Pan
troglodytes]
gi|410251296|gb|JAA13615.1| insulin-like growth factor 2 mRNA binding protein 2 [Pan
troglodytes]
gi|410302886|gb|JAA30043.1| insulin-like growth factor 2 mRNA binding protein 2 [Pan
troglodytes]
gi|410342487|gb|JAA40190.1| insulin-like growth factor 2 mRNA binding protein 2 [Pan
troglodytes]
Length = 599
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 152/333 (45%), Gaps = 41/333 (12%)
Query: 301 GASQSEE--LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
G SQ+ + +R+L P +G +IGK G TIK+I + + +++D+ K+N VT
Sbjct: 185 GTSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHR-KENSGAAEKPVT 243
Query: 359 AIESPDDIKSMAVEAVLLLQTKINDEDD--DTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
+P+ S A +L + K DE + + +++L + ++G +IGK G + +I
Sbjct: 244 IHATPEGT-SEACRMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEH 302
Query: 417 RTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPV 476
T + IS + + + V G V + A ++I+ +LR+ A ++ + N
Sbjct: 303 ETGTKITISSLQDLSIYNP-ERTITVKGTVEACASAEIEIMKKLRE-AFENDMLAVNQQA 360
Query: 477 GADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPY 536
L+P + + LG +G+ +LS + + P+
Sbjct: 361 N---------------LIPGLN-LSALGI-----FSTGLSVLSPPAGPRGAPPAAPYHPF 399
Query: 537 GSMSSYSSKLY-----------GGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGA 585
+ S Y S LY P + + +P AVG +IGK G+++ + + +GA
Sbjct: 400 TTHSGYFSSLYPHHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGA 459
Query: 586 TIEMSDSKS-SRGDRVALISGTPEQKRAAENLI 617
+I+++ ++ +R+ +I+G PE + A+ I
Sbjct: 460 SIKIAPAEGPDVSERMVIITGPPEAQFKAQGRI 492
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 88/393 (22%), Positives = 153/393 (38%), Gaps = 91/393 (23%)
Query: 142 CQILVPSSQSANIIGKAGATIKRLRSKTRT-----------------SIKVTPKDASEPT 184
+ILVP+ IIGK G TIK + +T++ +I TP+ SE
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTSE-- 253
Query: 185 HSCAMEFDNFVLISGESEAVKKA------LFAISAIMYKFSPREDIPLETTVREAPPSII 238
+C M + ++ E++ K A + A + ++ + +E L+ E I
Sbjct: 254 -ACRMILE---IMQKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKIT 309
Query: 239 IPS--DVPIYPPGGLYPNADPILPSRS----VPSILGAARVPDLQGYADTGNTWP----- 287
I S D+ IY P + S + L A D+ N P
Sbjct: 310 ISSLQDLSIYNPERTITVKGTVEACASAEIEIMKKLREAFENDMLAVNQQANLIPGLNLS 369
Query: 288 ---VYSTGLSLVS---------------------GLVGA--------------SQSEELV 309
++STGLS++S G + S E+ +
Sbjct: 370 ALGIFSTGLSVLSPPAGPRGAPPAAPYHPFTTHSGYFSSLYPHHQFGPFPHHHSYPEQEI 429
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTK--DNRDECVITVTAIESPDDIK 367
+ + P +G +IGK G IK + + +GA I + + D + VI I P + +
Sbjct: 430 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVI----ITGPPEAQ 485
Query: 368 SMA---VEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRI 424
A + L + N +++ + + V S G +IGK G +NE++ T A+V +
Sbjct: 486 FKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEVIV 545
Query: 425 SKGDKPKCADANDE-LVEVVGEVGSVRDALVQI 456
+ P D N+E +V ++G + + A +I
Sbjct: 546 PRDQTP---DENEEVIVRIIGHFFASQTAQRKI 575
Score = 43.5 bits (101), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 10/97 (10%)
Query: 138 EKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLI 197
E+E + +P+ IIGK GA IK+L SIK+ P + + + + V+I
Sbjct: 426 EQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVS-------ERMVII 478
Query: 198 SGESEAVKKALFAISAIMYK---FSPREDIPLETTVR 231
+G EA KA I + + F+P+E++ LE +R
Sbjct: 479 TGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIR 515
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 58/148 (39%), Gaps = 24/148 (16%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPF-PGAKDRVVTIYSHVKDK 93
E I + P +G++IGK G I + + A +K+ P +R+V I
Sbjct: 426 EQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII------- 478
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
+A K I + + K + K E I VPSS +
Sbjct: 479 ---------------TGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGR 523
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+IGK G T+ L++ T + + P+D +
Sbjct: 524 VIGKGGKTVNELQNLTSAEV-IVPRDQT 550
>gi|90081810|dbj|BAE90186.1| unnamed protein product [Macaca fascicularis]
Length = 300
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 139/314 (44%), Gaps = 53/314 (16%)
Query: 333 IRQASGAQIDVDDTKDNRDECVITVTAIESPDD--IKSMAVEAVLLLQTKINDEDDDT-- 388
+R+ SGA+I++ + N E ++T+T P D K+ A+ A + IN +
Sbjct: 1 MREESGARINISE--GNCPERIVTITG---PTDAIFKAFAMIAYKFEEDIINSMSNSPAT 55
Query: 389 ----VTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVG 444
VT+RL+V + G +IGK GS I EIR+ T A V+++ P ++ + V + G
Sbjct: 56 SKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLP---NSTERAVTISG 112
Query: 445 EVGSVRDALVQIILRLRDDALKDRDGSRNP-PVGADHIYSSGTGISMPPLLPSIP----- 498
++ + QI + + + K P P I++ G ++ +IP
Sbjct: 113 TPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQY-AIPHPDLT 171
Query: 499 ----------PVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYG 548
P PLG A G + + SS MG S
Sbjct: 172 KLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNL----MGQS-------------S 214
Query: 549 GL---PPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISG 605
GL PP T E+ +P + +G +IG+ G+ + IR++SGA I+++++ +R I+G
Sbjct: 215 GLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITG 274
Query: 606 TPEQKRAAENLIQA 619
TP A+ LI A
Sbjct: 275 TPANISLAQYLINA 288
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 112/260 (43%), Gaps = 28/260 (10%)
Query: 113 DALLKVHAAIA-----NAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRS 167
DA+ K A IA + + + +++ K +++VP+SQ ++IGK G+ IK +R
Sbjct: 28 DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRE 87
Query: 168 KTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPR-EDIPL 226
T ++V T + V ISG +A+ + + I +M + P+ IP
Sbjct: 88 STGAQVQVAGDMLPNST-------ERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPY 140
Query: 227 ETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQ-GYADTGNT 285
P +I + Y G Y P L ++ P Q A G
Sbjct: 141 RPKPASTP---VIFAGGQAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPGEK 197
Query: 286 WPVYSTG-----LSLVSGLVGA--SQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASG 338
P++S+ + SGL + + + EL I P + IG +IG+ G I IRQ SG
Sbjct: 198 LPLHSSEEAQNLMGQSSGLDASPPASTHELTI----PNDLIGCIIGRQGTKINEIRQMSG 253
Query: 339 AQIDVDDTKDNRDECVITVT 358
AQI + + + E IT+T
Sbjct: 254 AQIKIANATEGSSERQITIT 273
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 40/66 (60%), Gaps = 3/66 (4%)
Query: 302 ASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDV-DDTKDNRDECVITVTAI 360
A+ + +R++ P ++ G +IGKGG IK IR+++GAQ+ V D N E +T++
Sbjct: 54 ATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISG- 112
Query: 361 ESPDDI 366
+PD I
Sbjct: 113 -TPDAI 117
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 31/48 (64%)
Query: 39 YRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTI 86
+ + P+ +IG +IG+ G IN IRQ + A++K+ + G+ +R +TI
Sbjct: 225 HELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITI 272
Score = 39.7 bits (91), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 37 VIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTI 86
V R++ P GS+IGK G I IR+ T A+V+V D P + +R VTI
Sbjct: 60 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTI 110
>gi|328723973|ref|XP_003247998.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
isoform 3 [Acyrthosiphon pisum]
gi|328723975|ref|XP_003247999.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
isoform 4 [Acyrthosiphon pisum]
Length = 553
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 134/307 (43%), Gaps = 51/307 (16%)
Query: 300 VGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTA 359
+G Q+E +R+L + +G +IG+GG TI+ I Q + A++DV KDN +T
Sbjct: 141 IGNRQTE-FPLRILVHSDMVGAIIGRGGSTIRQITQQTRARVDVHR-KDNVGSLEKAITI 198
Query: 360 IESPDDIKSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
+P++ + + + ++Q + + + V +++L + +IG IIGK G+ I I T+
Sbjct: 199 YGNPENCTNACRKILEVMQQEATNTNKSDVILKILAHNNLIGRIIGKEGNTIKRIMSETE 258
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGAD 479
+ +S + + ++ V G + ++ A QI +LR D
Sbjct: 259 TKITVSSFNY-------ERIITVKGSIENMSKAEAQISAKLRQSFENDLQ---------- 301
Query: 480 HIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSM 539
SM P P + P+ S +GI Y + P
Sbjct: 302 ---------SMAPQTVMFPGLHPMAM----MSATGITYPGRGGPTSYQQFAPAPYPPMYP 348
Query: 540 SSYSSKLYGGLPPPL----------TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEM 589
S+ PP+ T + +P +AVG +IG GSN+ ++ + SGA++++
Sbjct: 349 STI---------PPINPALAADVQETAFLFIPNSAVGAIIGTKGSNIRSMIRFSGASVKV 399
Query: 590 SDSKSSR 596
+ +++ +
Sbjct: 400 ASTENEK 406
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 106/453 (23%), Positives = 186/453 (41%), Gaps = 96/453 (21%)
Query: 32 GNEESVI-YRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDP-FPGAKDRVVTIYSH 89
GN ++ RIL ++G++IG+ G I I Q+TRARV V G+ ++ +TIY +
Sbjct: 142 GNRQTEFPLRILVHSDMVGAIIGRGGSTIRQITQQTRARVDVHRKDNVGSLEKAITIYGN 201
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSS 149
++ C +A K+ + N +D K IL ++
Sbjct: 202 PEN----------------CT--NACRKILEVMQQEATNTNKSDVILK------ILAHNN 237
Query: 150 QSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALF 209
IIGK G TIKR+ S+T T I V+ + ++ + + G E + KA
Sbjct: 238 LIGRIIGKEGNTIKRIMSETETKITVS-----------SFNYERIITVKGSIENMSKAEA 286
Query: 210 AISAIMYKFSPREDIPLETTVRE-APPSIIIPSDVPIYPPGGLYPNA-----DPILPSRS 263
ISA + + E ++ AP +++ P GL+P A P R
Sbjct: 287 QISAKLRQ-------SFENDLQSMAPQTVMFP---------GLHPMAMMSATGITYPGRG 330
Query: 264 VPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVI 323
P+ Q +A ST + L Q + P + +G +I
Sbjct: 331 GPT--------SYQQFAPAPYPPMYPSTIPPINPALAADVQETAF---LFIPNSAVGAII 379
Query: 324 GKGGGTIKSIRQASGAQIDVDDTKDNRDECV-------------ITVTAIESPDDIKSMA 370
G G I+S+ + SGA + V T++ + V VT + + D
Sbjct: 380 GTKGSNIRSMIRFSGASVKVASTENEKQGVVGNAGDANSAQQASRKVTIVGTADS----Q 435
Query: 371 VEAVLLLQTKINDE------DDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRI 424
+A ++ K+ DE ++ +T+ +LV S +G IIG+ GS + E+++ T + +++
Sbjct: 436 WKAQGMIFDKLRDEGFVPNNEEVRLTVEILVPSSQVGRIIGRGGSNVRELQRVTGSIIKL 495
Query: 425 -SKGDKPKCADANDELVEVVGEVGSVRDALVQI 456
++G D V ++G + + A +I
Sbjct: 496 PTQGSTDGTEDTTT--VHIIGHFLATQSAQRRI 526
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 34/44 (77%)
Query: 554 LTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRG 597
LT+E+LVP++ VG++IG+ GSN+ +++++G+ I++ S+ G
Sbjct: 460 LTVEILVPSSQVGRIIGRGGSNVRELQRVTGSIIKLPTQGSTDG 503
>gi|328723977|ref|XP_001952825.2| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
isoform 1 [Acyrthosiphon pisum]
Length = 563
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 135/307 (43%), Gaps = 45/307 (14%)
Query: 300 VGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTA 359
+G Q+E +R+L + +G +IG+GG TI+ I Q + A++DV KDN +T
Sbjct: 141 IGNRQTE-FPLRILVHSDMVGAIIGRGGSTIRQITQQTRARVDVHR-KDNVGSLEKAITI 198
Query: 360 IESPDDIKSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
+P++ + + + ++Q + + + V +++L + +IG IIGK G+ I I T+
Sbjct: 199 YGNPENCTNACRKILEVMQQEATNTNKSDVILKILAHNNLIGRIIGKEGNTIKRIMSETE 258
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGAD 479
+ +S + + + ++ V G + ++ A QI +LR D
Sbjct: 259 TKITVSSINDINSFNY-ERIITVKGSIENMSKAEAQISAKLRQSFENDLQ---------- 307
Query: 480 HIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSM 539
SM P P + P+ S +GI Y + P
Sbjct: 308 ---------SMAPQTVMFPGLHPMAM----MSATGITYPGRGGPTSYQQFAPAPYPPMYP 354
Query: 540 SSYSSKLYGGLPPPL----------TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEM 589
S+ PP+ T + +P +AVG +IG GSN+ ++ + SGA++++
Sbjct: 355 STI---------PPINPALAADVQETAFLFIPNSAVGAIIGTKGSNIRSMIRFSGASVKV 405
Query: 590 SDSKSSR 596
+ +++ +
Sbjct: 406 ASTENEK 412
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 103/447 (23%), Positives = 181/447 (40%), Gaps = 78/447 (17%)
Query: 32 GNEESVI-YRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDP-FPGAKDRVVTIYSH 89
GN ++ RIL ++G++IG+ G I I Q+TRARV V G+ ++ +TIY +
Sbjct: 142 GNRQTEFPLRILVHSDMVGAIIGRGGSTIRQITQQTRARVDVHRKDNVGSLEKAITIYGN 201
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSS 149
++ C +A K+ + N +D K IL ++
Sbjct: 202 PEN----------------CT--NACRKILEVMQQEATNTNKSDVILK------ILAHNN 237
Query: 150 QSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALF 209
IIGK G TIKR+ S+T T I V S + ++ + + G E + KA
Sbjct: 238 LIGRIIGKEGNTIKRIMSETETKITV-----SSINDINSFNYERIITVKGSIENMSKAEA 292
Query: 210 AISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILG 269
ISA + + E ++ P ++ P P + P R P+
Sbjct: 293 QISAKLRQ-------SFENDLQSMAPQTVM---FPGLHPMAMMSATGITYPGRGGPT--- 339
Query: 270 AARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGT 329
Q +A ST + L Q + P + +G +IG G
Sbjct: 340 -----SYQQFAPAPYPPMYPSTIPPINPALAADVQETAF---LFIPNSAVGAIIGTKGSN 391
Query: 330 IKSIRQASGAQIDVDDTKDNRDECV-------------ITVTAIESPDDIKSMAVEAVLL 376
I+S+ + SGA + V T++ + V VT + + D +A +
Sbjct: 392 IRSMIRFSGASVKVASTENEKQGVVGNAGDANSAQQASRKVTIVGTADS----QWKAQGM 447
Query: 377 LQTKINDE------DDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRI-SKGDK 429
+ K+ DE ++ +T+ +LV S +G IIG+ GS + E+++ T + +++ ++G
Sbjct: 448 IFDKLRDEGFVPNNEEVRLTVEILVPSSQVGRIIGRGGSNVRELQRVTGSIIKLPTQGST 507
Query: 430 PKCADANDELVEVVGEVGSVRDALVQI 456
D V ++G + + A +I
Sbjct: 508 DGTEDTTT--VHIIGHFLATQSAQRRI 532
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 34/44 (77%)
Query: 554 LTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRG 597
LT+E+LVP++ VG++IG+ GSN+ +++++G+ I++ S+ G
Sbjct: 466 LTVEILVPSSQVGRIIGRGGSNVRELQRVTGSIIKLPTQGSTDG 509
>gi|297810533|ref|XP_002873150.1| hypothetical protein ARALYDRAFT_487225 [Arabidopsis lyrata subsp.
lyrata]
gi|297318987|gb|EFH49409.1| hypothetical protein ARALYDRAFT_487225 [Arabidopsis lyrata subsp.
lyrata]
Length = 334
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 137/310 (44%), Gaps = 51/310 (16%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD----NRDECVITVTAIESPDD 365
IR L G VIGKGG TI + SGA+I + ++ D ++ +I+ +
Sbjct: 37 IRFLVSNAAAGSVIGKGGSTITEFQAKSGARIQLSRNQEFFPGTTDRIIMISGSIKEVIN 96
Query: 366 IKSMAVEAVL-LLQTKINDEDDDTVT----IRLLVSSKVIGCIIGKSGSIINEIRKRTKA 420
+E +L L ++++ ED + V IRL+V + G IIGK G+ I + +KA
Sbjct: 97 ----GLELILDKLHSELHAEDGNEVEPRRRIRLVVPNSSCGGIIGKGGATIKSFIEESKA 152
Query: 421 DVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADH 480
++IS D +D LV + G A+ I+ +L +D ++ +P A
Sbjct: 153 GIKISPLDN-TFYGLSDRLVTLSGTFEEQMRAIDLILAKLTEDDHYSQN-VHSPYSYAGL 210
Query: 481 IYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMS 540
YS G PP ++P V GY+ S+ +P GS
Sbjct: 211 FYS---GFHGPPYAYALPSVATAGYN-----------------------SVNYAPNGSGG 244
Query: 541 SYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRV 600
Y + T+ + V +G V+G+ G N+ I +I+GA I++SD RGD
Sbjct: 245 KYQNH---KDEASTTVTIGVADEHIGLVLGRGGRNIMEITQITGARIKISD----RGD-- 295
Query: 601 ALISGTPEQK 610
+SGT ++K
Sbjct: 296 -FMSGTTDRK 304
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 135/317 (42%), Gaps = 67/317 (21%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV---DPFPGAKDRVVTIYSHVKDKEDV 96
R L + GSVIGK G I + ++ AR+++ + FPG DR++ I +K
Sbjct: 38 RFLVSNAAAGSVIGKGGSTITEFQAKSGARIQLSRNQEFFPGTTDRIIMISGSIK----- 92
Query: 97 EVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIG 156
E + + L K+H+ + N + ++ +++VP+S IIG
Sbjct: 93 ---------EVINGLELILDKLHSELHAEDGNEVEPRRR------IRLVVPNSSCGGIIG 137
Query: 157 KAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMY 216
K GATIK +++ IK++P D + S D V +SG E + + AI I+
Sbjct: 138 KGGATIKSFIEESKAGIKISPLDNTFYGLS-----DRLVTLSGTFE---EQMRAIDLILA 189
Query: 217 KFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILP-SRSVPSILGAARVPD 275
K + ED V +P Y GL+ + P + ++PS+ A
Sbjct: 190 KLT--EDDHYSQNVH-SP-----------YSYAGLFYSGFHGPPYAYALPSVATA----- 230
Query: 276 LQGYADTGNTWPVYSTGLSLVSGLVGASQSEE----LVIRVLCPFNKIGRVIGKGGGTIK 331
GY ++ N P +G G Q+ + + + IG V+G+GG I
Sbjct: 231 --GY-NSVNYAP---------NGSGGKYQNHKDEASTTVTIGVADEHIGLVLGRGGRNIM 278
Query: 332 SIRQASGAQIDVDDTKD 348
I Q +GA+I + D D
Sbjct: 279 EITQITGARIKISDRGD 295
Score = 42.4 bits (98), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
Query: 383 DEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEV 442
D + IR LVS+ G +IGK GS I E + ++ A +++S+ ++ D ++ +
Sbjct: 29 DSAEKPTHIRFLVSNAAAGSVIGKGGSTITEFQAKSGARIQLSR-NQEFFPGTTDRIIMI 87
Query: 443 VGEVGSVRDALVQIILRLRDDALKDRDGSRNPP 475
G + V + L I+ +L + L DG+ P
Sbjct: 88 SGSIKEVINGLELILDKLHSE-LHAEDGNEVEP 119
>gi|189234912|ref|XP_969611.2| PREDICTED: similar to AGAP004942-PA [Tribolium castaneum]
Length = 446
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 149/353 (42%), Gaps = 80/353 (22%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
L IR++ ++G +IGK G +K R+ SGA+I++ D + E ++TVT
Sbjct: 17 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISD--GSCPERIVTVTG-------S 67
Query: 368 SMAVEAVLLLQTKINDEDDDT-----------VTIRLLVSSKVIGCIIGKSGSIINEIRK 416
+ A+ L K +E D +T+RL+V + G +IGK GS I EIR+
Sbjct: 68 TNAIFKAFTLICKKFEEFQDINSGGSGVPRPPITLRLIVPASQCGSLIGKGGSKIKEIRE 127
Query: 417 RTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPV 476
T A ++++ P ++ + V + G +A+ Q I + L+ +PP
Sbjct: 128 VTGASIQVASEMLP---NSTERAVTISG----TGEAITQCIYHICTVMLE------SPPK 174
Query: 477 GADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLS-MGDSP 535
GA Y + P +L G + + ++ + +S +G SP
Sbjct: 175 GATIPYRPKPQVGGPVIL---------------AGGQAYTIQGNYAVPAHTDMSALGKSP 219
Query: 536 YGSMSSYSSKL-----YGGLPPPL-----------------------TLEVLVPANAVGK 567
+++ GGL P T E+ VP +G
Sbjct: 220 LAGLAALGLGGLAPTNTGGLNPAALAALAGSQLRTSNSRNQQNSNQQTHEMTVPNELIGC 279
Query: 568 VIGKAGSNLANIRKISGATIEMS---DSKSSRGDRVALISGTPEQKRAAENLI 617
+IGK G+ +A IR+ISGA I +S D +S DR ISG P+ A+ LI
Sbjct: 280 IIGKGGTKIAEIRQISGAMIRISNCDDRESGVTDRTITISGNPDAVALAQYLI 332
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 91/365 (24%), Positives = 148/365 (40%), Gaps = 65/365 (17%)
Query: 36 SVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKED 95
++ R++ +GS+IGK G+++ R+E+ A++ + D +R+VT+
Sbjct: 16 TLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDG--SCPERIVTV--------- 64
Query: 96 VEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKR----KEKEECQILVPSSQS 151
+ +A+ K I D + + +++VP+SQ
Sbjct: 65 -------------TGSTNAIFKAFTLICKKFEEFQDINSGGSGVPRPPITLRLIVPASQC 111
Query: 152 ANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAI 211
++IGK G+ IK +R T SI+V + T + V ISG EA+ + ++ I
Sbjct: 112 GSLIGKGGSKIKEIREVTGASIQVASEMLPNST-------ERAVTISGTGEAITQCIYHI 164
Query: 212 SAIMYKFSPR-EDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGA 270
+M + P+ IP + P I+ Y G Y +P+ + S LG
Sbjct: 165 CTVMLESPPKGATIPYRPKPQVGGPVILAGGQA--YTIQGNY-----AVPAHTDMSALGK 217
Query: 271 ARVPDLQGY-------ADTGNTWP---VYSTGLSL-VSGLVGASQSEELVIRVLCPFNKI 319
+ + L +TG P G L S S + + P I
Sbjct: 218 SPLAGLAALGLGGLAPTNTGGLNPAALAALAGSQLRTSNSRNQQNSNQQTHEMTVPNELI 277
Query: 320 GRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVI--TVTAIESPDDIKSMAVEAVLLL 377
G +IGKGG I IRQ SGA I + + D+R+ V T+T +PD AV L
Sbjct: 278 GCIIGKGGTKIAEIRQISGAMIRISNC-DDRESGVTDRTITISGNPD--------AVALA 328
Query: 378 QTKIN 382
Q IN
Sbjct: 329 QYLIN 333
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 21/113 (18%)
Query: 381 INDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELV 440
IND+ + T+TIRL++ K +G IIGK G I+ R+ + A + IS G P + +V
Sbjct: 9 INDDSNVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCP------ERIV 62
Query: 441 EVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSGTGISMPPL 493
V G ++ A I + + +D I S G+G+ PP+
Sbjct: 63 TVTGSTNAIFKAFTLICKKFEE--FQD-------------INSGGSGVPRPPI 100
Score = 42.7 bits (99), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 382 NDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVE 441
N ++ + T + V +++IGCIIGK G+ I EIR+ + A +RIS D + + D +
Sbjct: 259 NQQNSNQQTHEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCDD-RESGVTDRTIT 317
Query: 442 VVGEVGSVRDALVQIILRL 460
+ G +V AL Q ++ +
Sbjct: 318 ISGNPDAV--ALAQYLINM 334
>gi|74007267|ref|XP_548937.2| PREDICTED: poly(rC)-binding protein 1-like [Canis lupus familiaris]
Length = 362
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 155/352 (44%), Gaps = 54/352 (15%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
L IR+L ++G +IGK G + K R+ SGA+I++ + N E +IT+T + I
Sbjct: 14 LTIRLLMHRKEVGSIIGKKGESPKRFRKESGARINISE--GNCPERIITLTG--PTNAIF 69
Query: 368 SMAVEAVLLLQTKINDEDDDT-------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTKA 420
V + L+ IN ++ VT+RL+V + G +IGK G I EIR+ T A
Sbjct: 70 KAFVMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPAYQCGSLIGKGGCKIKEIRESTGA 129
Query: 421 DVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGS--------- 471
V+++ P ++ + + + G SV + + QI L + + + G
Sbjct: 130 QVQVAGDMLP---NSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPM 186
Query: 472 -RNPPV----GADHI-YSSG-----------TGISMPPL-------LPSIPPVGPLGYDQ 507
+ PV G D Y++G + PPL ++ P+ +Q
Sbjct: 187 PASSPVICAGGQDRWGYAAGYPHAAGYPHDTHYLEGPPLDAYSIQGQHTVSPLDLAKLNQ 246
Query: 508 RADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGK 567
A S M+ + G+ + DS + Y + L T E +P N +G
Sbjct: 247 VARQQSHFAMMHGGT--GFAGI---DSNSPEVKGYWASLDAST--QTTHEFTIPNNLIGC 299
Query: 568 VIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQA 619
+IG+ G+N+ IR++SGA I++++ R I+G+ A+ LI A
Sbjct: 300 IIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLINA 351
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 51/97 (52%), Gaps = 9/97 (9%)
Query: 383 DEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEV 442
E + T+TIRLL+ K +G IIGK G RK + A + IS+G+ P + ++ +
Sbjct: 8 SELNATLTIRLLMHRKEVGSIIGKKGESPKRFRKESGARINISEGNCP------ERIITL 61
Query: 443 VGEVGSVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
G ++ A V II +L +D ++ + + PPV
Sbjct: 62 TGPTNAIFKAFVMIIDKLEEDINSSMTNSTAASRPPV 98
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 75/359 (20%), Positives = 134/359 (37%), Gaps = 71/359 (19%)
Query: 36 SVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKED 95
++ R+L +GS+IGK G+ R+E+ AR+ + + +R++T
Sbjct: 13 TLTIRLLMHRKEVGSIIGKKGESPKRFRKESGARINISEG--NCPERIIT---------- 60
Query: 96 VEVDDEFNDKEPLCAAQDALLKVHAAIANAV-----ANATDNDKKRKEKEECQILVPSSQ 150
L +A+ K I + + ++ T++ + +++VP+ Q
Sbjct: 61 ------------LTGPTNAIFKAFVMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPAYQ 108
Query: 151 SANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFA 210
++IGK G IK +R T ++V T + + I+G ++V + +
Sbjct: 109 CGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNST-------ERAITIAGVPQSVTECVKQ 161
Query: 211 ISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPI--------------YPPGGLYPNAD 256
I +M + + T+ P +P+ P+ YP YP+
Sbjct: 162 ICLVMLETLSQSPQGRVMTIPYQP----MPASSPVICAGGQDRWGYAAGYPHAAGYPHDT 217
Query: 257 PIL--PSRSVPSILGAARV-----PDLQGYADTGNTWPVYSTGLSL---------VSGLV 300
L P SI G V L A + + + G V G
Sbjct: 218 HYLEGPPLDAYSIQGQHTVSPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSNSPEVKGYW 277
Query: 301 GA-SQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
+ S + P N IG +IG+ G I IRQ SGAQI + + + +T+T
Sbjct: 278 ASLDASTQTTHEFTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTIT 336
>gi|30680512|ref|NP_850764.1| binding to TOMV RNA 1L (long form) protein [Arabidopsis thaliana]
gi|332003360|gb|AED90743.1| binding to TOMV RNA 1L (long form) protein [Arabidopsis thaliana]
Length = 334
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 137/310 (44%), Gaps = 51/310 (16%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD----NRDECVITVTAIESPDD 365
IR L G VIGKGG TI + SGA+I + ++ D ++ +I+ +
Sbjct: 37 IRFLVSNAAAGSVIGKGGSTITEFQAKSGARIQLSRNQEFFPGTTDRIIMISGSIKEVVN 96
Query: 366 IKSMAVEAVL-LLQTKINDEDDDTVT----IRLLVSSKVIGCIIGKSGSIINEIRKRTKA 420
+E +L L ++++ ED + V IRL+V + G IIGK G+ I + +KA
Sbjct: 97 ----GLELILDKLHSELHAEDGNEVEPRRRIRLVVPNSSCGGIIGKGGATIKSFIEESKA 152
Query: 421 DVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADH 480
++IS D +D LV + G A+ I+ +L +D ++ +P A
Sbjct: 153 GIKISPLDN-TFYGLSDRLVTLSGTFEEQMRAIDLILAKLTEDDHYSQN-VHSPYSYAGL 210
Query: 481 IYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMS 540
YS G PP ++P V GY+ S+ +P GS
Sbjct: 211 FYS---GFHGPPYAYALPSVATAGYN-----------------------SVNYAPNGSGG 244
Query: 541 SYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRV 600
Y + T+ + V +G V+G+ G N+ I +++GA I++SD RGD
Sbjct: 245 KYQNHKE---EASTTVTIGVADEHIGLVLGRGGRNIMEITQMTGARIKISD----RGD-- 295
Query: 601 ALISGTPEQK 610
+SGT ++K
Sbjct: 296 -FMSGTTDRK 304
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 132/313 (42%), Gaps = 59/313 (18%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV---DPFPGAKDRVVTIYSHVKDKEDV 96
R L + GSVIGK G I + ++ AR+++ + FPG DR++ I +K
Sbjct: 38 RFLVSNAAAGSVIGKGGSTITEFQAKSGARIQLSRNQEFFPGTTDRIIMISGSIK----- 92
Query: 97 EVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIG 156
E + + L K+H+ + N + ++ +++VP+S IIG
Sbjct: 93 ---------EVVNGLELILDKLHSELHAEDGNEVEPRRR------IRLVVPNSSCGGIIG 137
Query: 157 KAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMY 216
K GATIK +++ IK++P D + S D V +SG E + + AI I+
Sbjct: 138 KGGATIKSFIEESKAGIKISPLDNTFYGLS-----DRLVTLSGTFE---EQMRAIDLILA 189
Query: 217 KFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILP-SRSVPSILGAARVPD 275
K + ED V +P Y GL+ + P + ++PS+ A
Sbjct: 190 KLT--EDDHYSQNVH-SP-----------YSYAGLFYSGFHGPPYAYALPSVATA----- 230
Query: 276 LQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQ 335
GY ++ N P S G + + + IG V+G+GG I I Q
Sbjct: 231 --GY-NSVNYAPNGSGG-----KYQNHKEEASTTVTIGVADEHIGLVLGRGGRNIMEITQ 282
Query: 336 ASGAQIDVDDTKD 348
+GA+I + D D
Sbjct: 283 MTGARIKISDRGD 295
Score = 42.7 bits (99), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
Query: 383 DEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEV 442
D + IR LVS+ G +IGK GS I E + ++ A +++S+ ++ D ++ +
Sbjct: 29 DSAEKPTHIRFLVSNAAAGSVIGKGGSTITEFQAKSGARIQLSR-NQEFFPGTTDRIIMI 87
Query: 443 VGEVGSVRDALVQIILRLRDDALKDRDGSRNPP 475
G + V + L I+ +L + L DG+ P
Sbjct: 88 SGSIKEVVNGLELILDKLHSE-LHAEDGNEVEP 119
>gi|354490195|ref|XP_003507245.1| PREDICTED: poly(rC)-binding protein 2 isoform 3 [Cricetulus
griseus]
Length = 349
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 161/349 (46%), Gaps = 44/349 (12%)
Query: 297 SGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVIT 356
+G++ + L IR+L ++G +IGK G ++K +R+ SGA+I++ + N E +IT
Sbjct: 3 TGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIIT 60
Query: 357 VTAIESPDDIKSMAVEAVL-LLQTKINDEDDDT-------VTIRLLVSSKVIGCIIGKSG 408
+ P + A ++ L+ I+ ++ VT+RL+V + G +IGK G
Sbjct: 61 LAG---PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGG 117
Query: 409 SIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKD- 467
I EIR+ T A V+++ P ++ + + + G S+ + + QI + + + K
Sbjct: 118 CKIKEIRESTGAQVQVAGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLESPPKGV 174
Query: 468 ----RDGSRNPPV---GADHIYSSGT-GISMPPLLPSI--------PPVGPLGYDQRADS 511
R + PV G YS+G+ S P PS+ PP+ A +
Sbjct: 175 TIPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPL-------EAYT 227
Query: 512 GSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGL---PPPLTLEVLVPANAVGKV 568
G + L L+M S + M+ ++ GL + E+ +P + +G +
Sbjct: 228 IQGQYAIPQPDLTKLHQLAMQQSHF-PMTHGNTGFSAGLDASAQTTSHELTIPNDLIGCI 286
Query: 569 IGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLI 617
IG+ G+ + IR++SGA I+ ++ DR I+G+ A+ LI
Sbjct: 287 IGRQGAKINEIRQMSGAQIKTANPVEGSTDRQVTITGSAASISLAQYLI 335
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 81/360 (22%), Positives = 147/360 (40%), Gaps = 75/360 (20%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH 89
E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R++T
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIIT---- 60
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAV-----ANATDNDKKRKEKEECQI 144
L +A+ K A I + + ++ T++ + ++
Sbjct: 61 ------------------LAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRL 102
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAV 204
+VP+SQ ++IGK G IK +R T ++V T + + I+G +++
Sbjct: 103 VVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNST-------ERAITIAGIPQSI 155
Query: 205 KKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGL-----------YP 253
+ + I +M + P+ T+ P PS P+ GG +P
Sbjct: 156 IECVKQICVVMLESPPK-----GVTIPYRPK----PSSSPVIFAGGQDRYSTGSDSASFP 206
Query: 254 NADPIL--------PSRSVPSILGAARVPD-----LQGYADTGNTWPVYSTGLSLVSGLV 300
+ P + P +I G +P L A + +P+ +GL
Sbjct: 207 HTTPSMCLNPDLEGPPLEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSAGLD 266
Query: 301 GASQ--SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
++Q S EL I P + IG +IG+ G I IRQ SGAQI + + + +T+T
Sbjct: 267 ASAQTTSHELTI----PNDLIGCIIGRQGAKINEIRQMSGAQIKTANPVEGSTDRQVTIT 322
>gi|328723971|ref|XP_003247997.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
isoform 2 [Acyrthosiphon pisum]
Length = 559
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 135/307 (43%), Gaps = 45/307 (14%)
Query: 300 VGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTA 359
+G Q+E +R+L + +G +IG+GG TI+ I Q + A++DV KDN +T
Sbjct: 141 IGNRQTE-FPLRILVHSDMVGAIIGRGGSTIRQITQQTRARVDVHR-KDNVGSLEKAITI 198
Query: 360 IESPDDIKSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
+P++ + + + ++Q + + + V +++L + +IG IIGK G+ I I T+
Sbjct: 199 YGNPENCTNACRKILEVMQQEATNTNKSDVILKILAHNNLIGRIIGKEGNTIKRIMSETE 258
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGAD 479
+ +S + + + ++ V G + ++ A QI +LR D
Sbjct: 259 TKITVSSINDINSFNY-ERIITVKGSIENMSKAEAQISAKLRQSFENDLQ---------- 307
Query: 480 HIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSM 539
SM P P + P+ S +GI Y + P
Sbjct: 308 ---------SMAPQTVMFPGLHPMAM----MSATGITYPGRGGPTSYQQFAPAPYPPMYP 354
Query: 540 SSYSSKLYGGLPPPL----------TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEM 589
S+ PP+ T + +P +AVG +IG GSN+ ++ + SGA++++
Sbjct: 355 STI---------PPINPALAADVQETAFLFIPNSAVGAIIGTKGSNIRSMIRFSGASVKV 405
Query: 590 SDSKSSR 596
+ +++ +
Sbjct: 406 ASTENEK 412
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 103/447 (23%), Positives = 181/447 (40%), Gaps = 78/447 (17%)
Query: 32 GNEESVI-YRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDP-FPGAKDRVVTIYSH 89
GN ++ RIL ++G++IG+ G I I Q+TRARV V G+ ++ +TIY +
Sbjct: 142 GNRQTEFPLRILVHSDMVGAIIGRGGSTIRQITQQTRARVDVHRKDNVGSLEKAITIYGN 201
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSS 149
++ C +A K+ + N +D K IL ++
Sbjct: 202 PEN----------------CT--NACRKILEVMQQEATNTNKSDVILK------ILAHNN 237
Query: 150 QSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALF 209
IIGK G TIKR+ S+T T I V S + ++ + + G E + KA
Sbjct: 238 LIGRIIGKEGNTIKRIMSETETKITV-----SSINDINSFNYERIITVKGSIENMSKAEA 292
Query: 210 AISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILG 269
ISA + + E ++ P ++ P P + P R P+
Sbjct: 293 QISAKLRQ-------SFENDLQSMAPQTVM---FPGLHPMAMMSATGITYPGRGGPT--- 339
Query: 270 AARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGT 329
Q +A ST + L Q + P + +G +IG G
Sbjct: 340 -----SYQQFAPAPYPPMYPSTIPPINPALAADVQETAF---LFIPNSAVGAIIGTKGSN 391
Query: 330 IKSIRQASGAQIDVDDTKDNRDECV-------------ITVTAIESPDDIKSMAVEAVLL 376
I+S+ + SGA + V T++ + V VT + + D +A +
Sbjct: 392 IRSMIRFSGASVKVASTENEKQGVVGNAGDANSAQQASRKVTIVGTADS----QWKAQGM 447
Query: 377 LQTKINDE------DDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRI-SKGDK 429
+ K+ DE ++ +T+ +LV S +G IIG+ GS + E+++ T + +++ ++G
Sbjct: 448 IFDKLRDEGFVPNNEEVRLTVEILVPSSQVGRIIGRGGSNVRELQRVTGSIIKLPTQGST 507
Query: 430 PKCADANDELVEVVGEVGSVRDALVQI 456
D V ++G + + A +I
Sbjct: 508 DGTEDTTT--VHIIGHFLATQSAQRRI 532
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 34/44 (77%)
Query: 554 LTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRG 597
LT+E+LVP++ VG++IG+ GSN+ +++++G+ I++ S+ G
Sbjct: 466 LTVEILVPSSQVGRIIGRGGSNVRELQRVTGSIIKLPTQGSTDG 509
>gi|327263852|ref|XP_003216731.1| PREDICTED: poly(rC)-binding protein 2-like isoform 1 [Anolis
carolinensis]
Length = 360
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 162/353 (45%), Gaps = 41/353 (11%)
Query: 297 SGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVIT 356
+G++ + L IR+L ++G +IGK G ++K +R+ SGA+I++ + N E +IT
Sbjct: 3 TGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIIT 60
Query: 357 VTAIESPDD--IKSMAV------EAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSG 408
+ P + K+ A+ E + T VT+RL+V + G +IGK G
Sbjct: 61 LAG---PTNAIFKAFAMIIDKLEEDISSSMTNSTASSRPPVTLRLVVPASQCGSLIGKGG 117
Query: 409 SIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKD- 467
I EIR+ T A V+++ P ++ + + + G S+ + + QI + + + K
Sbjct: 118 CKIKEIRESTGAQVQVAGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLESPPKGV 174
Query: 468 ----RDGSRNPPV---GADHIYSSGTGISMPPLLPSIPPVGPL-GYDQRADSGSGIGMLS 519
R + PV G YSSG+ S P PS+ L G Q A + G +
Sbjct: 175 TIPYRPKPSSSPVIFAGGQDRYSSGSA-SYPHTAPSMCLNSDLEGPPQEAYTIQGQYAIP 233
Query: 520 SSSLYGYGSLSM---------GDSPYGSMSSYS---SKLYGGL---PPPLTLEVLVPANA 564
L L+M G++ + + S S + GL + E+ +P +
Sbjct: 234 QPDLTKLHQLAMQQSHFPMSHGNTGFSGVESSSPDEKGYWAGLDASAQTTSHELTIPNDL 293
Query: 565 VGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLI 617
+G +IG+ G+ + IR++SGA I++++ DR I+G+ A+ LI
Sbjct: 294 IGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLI 346
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 85/364 (23%), Positives = 153/364 (42%), Gaps = 72/364 (19%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH 89
E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R++T
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIIT---- 60
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAV-----ANATDNDKKRKEKEECQI 144
L +A+ K A I + + ++ T++ + ++
Sbjct: 61 ------------------LAGPTNAIFKAFAMIIDKLEEDISSSMTNSTASSRPPVTLRL 102
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAV 204
+VP+SQ ++IGK G IK +R T ++V T + + I+G +++
Sbjct: 103 VVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNST-------ERAITIAGIPQSI 155
Query: 205 KKALFAISAIMYKFSPRE-DIPLETTVREAPPSIIIPSDVPIYPPGGL-YPNADPIL--- 259
+ + I +M + P+ IP +P +I Y G YP+ P +
Sbjct: 156 IECVKQICVVMLESPPKGVTIPYRPKPSSSP--VIFAGGQDRYSSGSASYPHTAPSMCLN 213
Query: 260 -----PSRSVPSILGAARVPD-----LQGYADTGNTWPVY--STGLSLV----------- 296
P + +I G +P L A + +P+ +TG S V
Sbjct: 214 SDLEGPPQEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMSHGNTGFSGVESSSPDEKGYW 273
Query: 297 SGLVGASQ--SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECV 354
+GL ++Q S EL I P + IG +IG+ G I IRQ SGAQI + + + +
Sbjct: 274 AGLDASAQTTSHELTI----PNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQ 329
Query: 355 ITVT 358
+T+T
Sbjct: 330 VTIT 333
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 7/65 (10%)
Query: 29 DEKG-------NEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKD 81
DEKG + ++ + + P+ +IG +IG+ G IN IRQ + A++K+ +P G+ D
Sbjct: 268 DEKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTD 327
Query: 82 RVVTI 86
R VTI
Sbjct: 328 RQVTI 332
>gi|396578134|ref|NP_001257528.1| insulin-like growth factor 2 mRNA-binding protein 2 isoform 2
[Rattus norvegicus]
Length = 524
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 146/322 (45%), Gaps = 39/322 (12%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSM 369
+R+L P +G +IGK G TIK+I + + +++D+ K+N VT +P+ S
Sbjct: 121 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHR-KENSGAAEKPVTIHATPEGT-SE 178
Query: 370 AVEAVLLLQTKINDEDD--DTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKG 427
A +L + K DE + V +++L + +G +IGK G + +I T + IS
Sbjct: 179 ACRMILEIMQKEADETKLAEEVPLKILAHNGFVGRLIGKEGRNLKKIEHETGTKITISSL 238
Query: 428 DKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSGTG 487
+ + + V G + + A ++I+ +LR+ A ++ + N
Sbjct: 239 QDLSIYNP-ERTITVKGTIEACASAEMEIMKKLRE-AFENDMLAVNQQAN---------- 286
Query: 488 ISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLY 547
L+P + + LG +G+ +L + S P+ + S Y S LY
Sbjct: 287 -----LIPGLN-LSALGI-----FSTGLSVLPPPAGPRGAPPSPPYHPFATHSGYFSSLY 335
Query: 548 G-----------GLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS-S 595
P T+ + +P AVG +IGK G+++ + + +GA+I+++ ++
Sbjct: 336 PHHHFGPFPHHHSYPEQETVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPD 395
Query: 596 RGDRVALISGTPEQKRAAENLI 617
+R+ +I+G PE + A+ I
Sbjct: 396 VSERMVIITGPPEAQFKAQGRI 417
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 89/390 (22%), Positives = 149/390 (38%), Gaps = 85/390 (21%)
Query: 142 CQILVPSSQSANIIGKAGATIKRLRSKTRT-----------------SIKVTPKDASEPT 184
+ILVP+ IIGK G TIK + +T++ +I TP+ SE
Sbjct: 121 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTSE-- 178
Query: 185 HSCAMEFDNFVLISGES---EAVKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPS 241
+C M + + E+ E V + A + + + +E L+ E I I S
Sbjct: 179 -ACRMILEIMQKEADETKLAEEVPLKILAHNGFVGRLIGKEGRNLKKIEHETGTKITISS 237
Query: 242 --DVPIYPPGGLYPNADPILPSRS----VPSILGAARVPDLQGYADTGNTWP-------- 287
D+ IY P I S + L A D+ N P
Sbjct: 238 LQDLSIYNPERTITVKGTIEACASAEMEIMKKLREAFENDMLAVNQQANLIPGLNLSALG 297
Query: 288 VYSTGLSLV---------------------SGLVGA--------------SQSEELVIRV 312
++STGLS++ SG + S E+ + +
Sbjct: 298 IFSTGLSVLPPPAGPRGAPPSPPYHPFATHSGYFSSLYPHHHFGPFPHHHSYPEQETVSL 357
Query: 313 LCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTK--DNRDECVITVTAIESPDDIKSMA 370
P +G +IGK G IK + + +GA I + + D + VI I P + + A
Sbjct: 358 FIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVI----ITGPPEAQFKA 413
Query: 371 ---VEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKG 427
+ L + N +++ + + V S G +IGK G +NE++ T A+V + +
Sbjct: 414 QGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEVIVPRD 473
Query: 428 DKPKCADANDE-LVEVVGEVGSVRDALVQI 456
P D N+E +V ++G + + A +I
Sbjct: 474 QTP---DENEEVIVRIIGHFFASQTAQRKI 500
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 10/97 (10%)
Query: 138 EKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLI 197
E+E + +P+ IIGK GA IK+L SIK+ P + + + + V+I
Sbjct: 351 EQETVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVS-------ERMVII 403
Query: 198 SGESEAVKKALFAISAIMYK---FSPREDIPLETTVR 231
+G EA KA I + + F+P+E++ LE +R
Sbjct: 404 TGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIR 440
Score = 39.7 bits (91), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 56/142 (39%), Gaps = 24/142 (16%)
Query: 41 ILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPF-PGAKDRVVTIYSHVKDKEDVEVD 99
+ P +G++IGK G I + + A +K+ P +R+V I
Sbjct: 357 LFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII------------- 403
Query: 100 DEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAG 159
+A K I + + K + K E I VPSS + +IGK G
Sbjct: 404 ---------TGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGG 454
Query: 160 ATIKRLRSKTRTSIKVTPKDAS 181
T+ L++ T + + P+D +
Sbjct: 455 KTVNELQNLTSAEV-IVPRDQT 475
Score = 39.3 bits (90), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 63/138 (45%), Gaps = 24/138 (17%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKEDVEV 98
RIL P +G++IGK G I +I ++T++RV + GA ++ VTI++
Sbjct: 122 RILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHA---------- 171
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
E A +L++ A ++ K E+ +IL + +IGK
Sbjct: 172 -----TPEGTSEACRMILEIMQKEA--------DETKLAEEVPLKILAHNGFVGRLIGKE 218
Query: 159 GATIKRLRSKTRTSIKVT 176
G +K++ +T T I ++
Sbjct: 219 GRNLKKIEHETGTKITIS 236
>gi|256083129|ref|XP_002577802.1| heterogeneous nuclear ribonucleoprotein [Schistosoma mansoni]
gi|353230296|emb|CCD76467.1| putative heterogeneous nuclear ribonucleoprotein k [Schistosoma
mansoni]
Length = 368
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 87/374 (23%), Positives = 153/374 (40%), Gaps = 84/374 (22%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSM 369
+R L G +IGKGG IK IR+ ++ + D+ N E V+ + D+ S+
Sbjct: 11 LRFLISTKAAGVIIGKGGENIKKIREEYSVKVTIPDS--NGPERVLVLDG-----DLGSV 63
Query: 370 AVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDK 429
+E K+ DD V +RLLV GC+IG++G I E+R+ ++ + K +
Sbjct: 64 -IEIFRENLEKMQSNRDDGVDLRLLVHQSQAGCVIGRAGYKIKELRE--QSGLHTLKVYQ 120
Query: 430 PKCADANDELVEVVGEVGSVRDALVQIILRL---------RDDALKDRDGSRNPPVGADH 480
C + D ++++VG+VG V D L I L ++ ++ D +P G
Sbjct: 121 MLCPCSTDRVIQLVGDVGKVLDCLRSIAELLEGAPPKGSRQNYDARNADEFISPEYGGWG 180
Query: 481 IYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMS 540
+ + G G++ L+ S V Y + ++ ++G G+ G +
Sbjct: 181 VGNQGPGLN---LVRSRNNVANTSYPHNN--------ILTTGIFGGGASGATGRNGGQTT 229
Query: 541 SYSSKLYGGLPPP---------------------------------------------LT 555
S S L GGLP +
Sbjct: 230 SVSQALAGGLPHASAAAMLAATGGQTTGGPNPGTAGDAAAATAAAMVAAGLMRGLPNRMA 289
Query: 556 LEVLVPANA---------VGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGT 606
+ +L P + +G ++G++G + +R S A I++S + DR+ I+GT
Sbjct: 290 MSILTPTTSTQVSVSNKMIGAIMGRSGCRINQVRHESNADIKISKQEPGVEDRIITITGT 349
Query: 607 PEQKRAAENLIQAF 620
PEQ + A+ L+Q +
Sbjct: 350 PEQIQNAQFLLQMW 363
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 29/40 (72%)
Query: 47 VIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTI 86
+IG+++G+SG IN +R E+ A +K+ PG +DR++TI
Sbjct: 307 MIGAIMGRSGCRINQVRHESNADIKISKQEPGVEDRIITI 346
>gi|384947380|gb|AFI37295.1| poly(rC)-binding protein 1 [Macaca mulatta]
Length = 358
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 158/348 (45%), Gaps = 55/348 (15%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
L IR+L ++G +IGK G ++K IR+ SGA+I++ + N E +IT+T P +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIITLTG---PTNAI 68
Query: 368 SMAVEAVL-LLQTKINDEDDDT-------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
A ++ L+ IN ++ VT+RL+V + G +IGK G I EIR+ T
Sbjct: 69 FKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTG 128
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDG--------- 470
A V+++ P ++ + + + G SV + + QI L + + + G
Sbjct: 129 AQVQVAGDMLP---NSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQP 185
Query: 471 --SRNPPV---GADHI-----YSSGTG-ISMPPL-------LPSIPPVGPLGYDQRADSG 512
+ +P + G D Y T + PPL +I P+ +Q A
Sbjct: 186 MPASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISPLDLAKLNQVARQQ 245
Query: 513 SGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGL---PPPLTLEVLVPANAVGKVI 569
S M+ + G+ + DS + Y + GL + E+ +P + +G +I
Sbjct: 246 SHFAMMHGGT--GFAGI---DSSSPEVKGY----WAGLDASAQTTSHELTIPNDLIGCII 296
Query: 570 GKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLI 617
G+ G+ + IR++SGA I++++ DR I+G+ A+ LI
Sbjct: 297 GRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLI 344
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 83/368 (22%), Positives = 147/368 (39%), Gaps = 82/368 (22%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH 89
E G ++ R+L +GS+IGK G+ + IR+E+ AR+ + + +R++T
Sbjct: 7 ESGLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIIT---- 60
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAV-----ANATDNDKKRKEKEECQI 144
L +A+ K A I + + ++ T++ + ++
Sbjct: 61 ------------------LTGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRL 102
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAV 204
+VP++Q ++IGK G IK +R T ++V T + + I+G ++V
Sbjct: 103 VVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNST-------ERAITIAGVPQSV 155
Query: 205 KKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGL--------YPNAD 256
+ + I +M + + T+ P +P+ P+ GG YP+A
Sbjct: 156 TECVKQICLVMLETLSQSPQGRVMTIPYQP----MPASSPVICAGGQDRCSDAAGYPHAT 211
Query: 257 PIL--PSRSVPSILGAARVPDL---------------------QGYADTGNTWPV---YS 290
L P SI G + L G+A ++ P Y
Sbjct: 212 HDLEGPPLDAYSIQGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYW 271
Query: 291 TGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNR 350
GL + + S EL I P + IG +IG+ G I IRQ SGAQI + + +
Sbjct: 272 AGLDASA----QTTSHELTI----PNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGS 323
Query: 351 DECVITVT 358
+ +T+T
Sbjct: 324 TDRQVTIT 331
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 9/92 (9%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+TIRLL+ K +G IIGK G + IR+ + A + IS+G+ P + ++ + G
Sbjct: 13 TLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCP------ERIITLTGPTN 66
Query: 448 SVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
++ A II +L +D ++ + + PPV
Sbjct: 67 AIFKAFAMIIDKLEEDINSSMTNSTAASRPPV 98
Score = 42.7 bits (99), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 383 DEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEV 442
D T + L + + +IGCIIG+ G+ INEIR+ + A ++I+ + D V +
Sbjct: 275 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN----PVEGSTDRQVTI 330
Query: 443 VGEVGSVRDALVQIILRLRDD 463
G S+ A I +RL +
Sbjct: 331 TGSAASISLAQYLINVRLSSE 351
>gi|259487459|tpe|CBF86155.1| TPA: KH domain RNA binding protein (AFU_orthologue; AFUA_2G04940)
[Aspergillus nidulans FGSC A4]
Length = 465
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 101/396 (25%), Positives = 169/396 (42%), Gaps = 83/396 (20%)
Query: 285 TWPVYSTGLSLVSGLVGASQSEE---------LVIRVLCPFNKIGRVIGKGGGTIKSIRQ 335
T P+ ST G +QSE+ + IR + + VIGKGG + IR+
Sbjct: 79 TQPIQSTA---SHGEAAGNQSEQQRPQDESNWIHIRAVISSQEAATVIGKGGENVSQIRR 135
Query: 336 ASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKINDEDDD-------- 387
SGA+ V D E ++TV+ P D + A L+++T +N+E D
Sbjct: 136 LSGAKCTVSDYSRGAVERILTVSG---PQDAVAKAFG--LIIRT-LNNEPLDAASTAQSK 189
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T +RLL+ +IG IIGK G+ I EI+ + A + S P + + + ++G
Sbjct: 190 TYPLRLLIPHILIGSIIGKGGTRIREIQDASGARLNASDACLPL---STERSLVILGVAD 246
Query: 448 SVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSS-------GTGISMPPLLPSIPPV 500
+V A + + L + L +R G P + + S G+ + P +P P
Sbjct: 247 AVHIATYYVAVTLVEQ-LTERFGG---PAASAYATRSGGPAGAVPGGMQVVPYVPQ-PAG 301
Query: 501 GPLGYD---QRADSG---SGIGMLSSSSLYG-------------YGSLSMGDSPYGSMSS 541
G G+ +R G +G G L+G YG+ +PY
Sbjct: 302 GQYGHPDTFKRHHPGQARAGAGAYGVPYLHGQHAPAPVAPQPMHYGAP---QTPYAGAGP 358
Query: 542 YSSKLY------------------GGLPP--PLTLEVLVPANAVGKVIGKAGSNLANIRK 581
+ Y GG P PLT ++ +P + VG +IGK G+ + IR
Sbjct: 359 HQPTPYGAPQAAQPRGGPTPAAPVGGAMPGQPLTQQIYIPNDMVGAIIGKGGAKINEIRH 418
Query: 582 ISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLI 617
+SG+ I++++ + + +R+ I+GT E + A ++
Sbjct: 419 LSGSVIKINEPQENSNERLVTITGTQECNQMALYML 454
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 88/384 (22%), Positives = 156/384 (40%), Gaps = 92/384 (23%)
Query: 50 SVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFN------ 103
+VIGK G+ ++ IR+ + A+ V D GA +R++T V +D V F
Sbjct: 121 TVIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILT----VSGPQDA-VAKAFGLIIRTL 175
Query: 104 DKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIK 163
+ EPL AA A K + ++L+P +IIGK G I+
Sbjct: 176 NNEPLDAASTAQSKTYP---------------------LRLLIPHILIGSIIGKGGTRIR 214
Query: 164 RLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAIS-AIMYKFSPRE 222
++ + + + DA P + + ++I G ++AV A + ++ ++ + + R
Sbjct: 215 EIQDASGARLNAS--DACLP-----LSTERSLVILGVADAVHIATYYVAVTLVEQLTERF 267
Query: 223 DIPLETTVREAPPSI---------IIPSDVPIYPPGGLYPNADPILPSRSVP----SILG 269
P + ++P VP P GG Y + D R P + G
Sbjct: 268 GGPAASAYATRSGGPAGAVPGGMQVVPY-VP-QPAGGQYGHPDTF--KRHHPGQARAGAG 323
Query: 270 AARVPDLQG--------------------YADTGNTWPV-YST--------GLSLVSGLV 300
A VP L G YA G P Y G + + +
Sbjct: 324 AYGVPYLHGQHAPAPVAPQPMHYGAPQTPYAGAGPHQPTPYGAPQAAQPRGGPTPAAPVG 383
Query: 301 GASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAI 360
GA + L ++ P + +G +IGKGG I IR SG+ I +++ ++N +E ++T+T
Sbjct: 384 GAMPGQPLTQQIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQENSNERLVTITGT 443
Query: 361 ESPDDIKSMAVEAVLLLQTKINDE 384
+ + + A+ +L +++ E
Sbjct: 444 QECNQM------ALYMLYSRLESE 461
Score = 38.9 bits (89), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 33/52 (63%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTI 86
+ + +I P+ ++G++IGK G IN IR + + +K+ +P + +R+VTI
Sbjct: 389 QPLTQQIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQENSNERLVTI 440
>gi|449524744|ref|XP_004169381.1| PREDICTED: poly(rC)-binding protein 3-like [Cucumis sativus]
Length = 224
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 88/174 (50%), Gaps = 17/174 (9%)
Query: 4 SGKRYRSQRDNDRDGKNQKRRINEKDEK--GNEESVIYRILCPDGVIGSVIGKSGKVINS 61
S + Y S +D D+K G ++R++ P +GS+IG+ G +I
Sbjct: 46 SNQDYSSVPPSDSAAHEPSNHTGPSDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKK 105
Query: 62 IRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAA 121
+ +ETRAR++V+D G DRVV I KE++E PL A DA+++V
Sbjct: 106 MCEETRARIRVLDGAVGTPDRVVLI----SGKEELE--------SPLSPAMDAVIRVFKR 153
Query: 122 IANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKV 175
++ N D+ + ++LV S+Q+ N+IGK G+ IK ++ T S++V
Sbjct: 154 VSGLSEN---EDEAKASFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASVRV 204
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 71/128 (55%), Gaps = 7/128 (5%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
+ V R++ P K+G +IG+ G IK + + + A+I V D + V+ ++ E +
Sbjct: 80 DCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRVVLISGKEELESP 139
Query: 367 KSMAVEAVLLLQTKIN--DEDDDT-----VTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
S A++AV+ + +++ E++D +IRLLV+S +IGK GS+I I++ T
Sbjct: 140 LSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQAINLIGKQGSLIKSIQESTG 199
Query: 420 ADVRISKG 427
A VR+ G
Sbjct: 200 ASVRVLSG 207
>gi|193083110|ref|NP_001122384.1| poly(rC)-binding protein 2 isoform e [Homo sapiens]
gi|291389255|ref|XP_002711064.1| PREDICTED: poly(rC) binding protein 2-like isoform 1 [Oryctolagus
cuniculus]
gi|348581079|ref|XP_003476305.1| PREDICTED: poly(rC)-binding protein 2 isoform 3 [Cavia porcellus]
gi|184186908|gb|ACC69194.1| poly(rC) binding protein 2 [Mus musculus]
gi|208967068|dbj|BAG73548.1| poly(rC) binding protein 2 [synthetic construct]
Length = 361
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 167/353 (47%), Gaps = 40/353 (11%)
Query: 297 SGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVIT 356
+G++ + L IR+L ++G +IGK G ++K +R+ SGA+I++ + N E +IT
Sbjct: 3 TGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIIT 60
Query: 357 VTAIESPDDIKSMAVEAVL-LLQTKINDEDDDT-------VTIRLLVSSKVIGCIIGKSG 408
+ P + A ++ L+ I+ ++ VT+RL+V + G +IGK G
Sbjct: 61 LAG---PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGG 117
Query: 409 SIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKD- 467
I EIR+ T A V+++ P ++ + + + G S+ + + QI + + + K
Sbjct: 118 CKIKEIRESTGAQVQVAGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLESPPKGV 174
Query: 468 ----RDGSRNPPV---GADHIYSSGT-GISMPPLLPSI--------PPVGPLGYD-QRAD 510
R + PV G YS+G+ S P PS+ PP+ Q A
Sbjct: 175 TIPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAI 234
Query: 511 SGSGIGMLSSSSLY-GYGSLSMGDSPYGSMSSYSSKL--YGGL---PPPLTLEVLVPANA 564
+ L ++ + ++ G++ + + S S ++ Y GL + E+ +P +
Sbjct: 235 PQPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWGLDASAQTTSHELTIPNDL 294
Query: 565 VGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLI 617
+G +IG+ G+ + IR++SGA I++++ DR I+G+ A+ LI
Sbjct: 295 IGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLI 347
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 84/373 (22%), Positives = 152/373 (40%), Gaps = 87/373 (23%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH 89
E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R++T
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIIT---- 60
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAV-----ANATDNDKKRKEKEECQI 144
L +A+ K A I + + ++ T++ + ++
Sbjct: 61 ------------------LAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRL 102
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAV 204
+VP+SQ ++IGK G IK +R T ++V T + + I+G +++
Sbjct: 103 VVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNST-------ERAITIAGIPQSI 155
Query: 205 KKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGL-----------YP 253
+ + I +M + P+ T+ P PS P+ GG +P
Sbjct: 156 IECVKQICVVMLESPPK-----GVTIPYRPK----PSSSPVIFAGGQDRYSTGSDSASFP 206
Query: 254 NADPIL--------PSRSVPSILGAARVPD-----LQGYADTGNTWPVY--STGLSLVS- 297
+ P + P +I G +P L A + +P+ +TG S +
Sbjct: 207 HTTPSMCLNPDLEGPPLEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSGIES 266
Query: 298 ---------GLVGASQ--SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDT 346
GL ++Q S EL I P + IG +IG+ G I IRQ SGAQI + +
Sbjct: 267 SSPEVKGYWGLDASAQTTSHELTI----PNDLIGCIIGRQGAKINEIRQMSGAQIKIANP 322
Query: 347 KDNRDECVITVTA 359
+ + +T+T
Sbjct: 323 VEGSTDRQVTITG 335
>gi|426217760|ref|XP_004003120.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 1 [Ovis aries]
Length = 599
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 152/333 (45%), Gaps = 41/333 (12%)
Query: 301 GASQSEE--LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
G+SQ+ + +R+L P +G +IGK G TIK+I + + +++D+ K+N VT
Sbjct: 185 GSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHR-KENSGAAEKPVT 243
Query: 359 AIESPDDIKSMAVEAVLLLQTKINDEDD--DTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
+P+ S A +L + K DE + + +++L + ++G +IGK G + +I
Sbjct: 244 IHATPEGT-SEACRMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEH 302
Query: 417 RTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPV 476
T + IS + + + V G V + A ++I+ +LR+ N +
Sbjct: 303 ETGTKITISSLQDLSIYNP-ERTITVKGTVEACASAEIEIMKKLRE-------AFENDML 354
Query: 477 GADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPY 536
A+ + G+++ L +G+ +L + + P+
Sbjct: 355 AANQQANLIPGLNLSAL---------------GIFSTGLSVLPPPAGPRGAPPAPPYHPF 399
Query: 537 GSMSSYSSKL-----YGGLPPPLT------LEVLVPANAVGKVIGKAGSNLANIRKISGA 585
+ S Y S L +G P + + + +P AVG +IGK G+++ + + +GA
Sbjct: 400 ATHSGYFSSLCPPHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGA 459
Query: 586 TIEMSDSKS-SRGDRVALISGTPEQKRAAENLI 617
+I+++ ++ +R+ +I+G PE + A+ I
Sbjct: 460 SIKIAPAEGPDVSERMVIITGPPEAQFKAQGRI 492
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 88/393 (22%), Positives = 153/393 (38%), Gaps = 91/393 (23%)
Query: 142 CQILVPSSQSANIIGKAGATIKRLRSKTRT-----------------SIKVTPKDASEPT 184
+ILVP+ IIGK G TIK + +T++ +I TP+ SE
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTSE-- 253
Query: 185 HSCAMEFDNFVLISGESEAVKKA------LFAISAIMYKFSPREDIPLETTVREAPPSII 238
+C M + ++ E++ K A + A + ++ + +E L+ E I
Sbjct: 254 -ACRMILE---IMQKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKIT 309
Query: 239 IPS--DVPIYPPGGLYPNADPILPSRS----VPSILGAARVPDLQGYADTGNTWP----- 287
I S D+ IY P + S + L A D+ N P
Sbjct: 310 ISSLQDLSIYNPERTITVKGTVEACASAEIEIMKKLREAFENDMLAANQQANLIPGLNLS 369
Query: 288 ---VYSTGLSLV---------------------SGLVGA--------------SQSEELV 309
++STGLS++ SG + S E+ +
Sbjct: 370 ALGIFSTGLSVLPPPAGPRGAPPAPPYHPFATHSGYFSSLCPPHQFGPFPHHHSYPEQEI 429
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTK--DNRDECVITVTAIESPDDIK 367
+ + P +G +IGK G IK + + +GA I + + D + VI I P + +
Sbjct: 430 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVI----ITGPPEAQ 485
Query: 368 SMA---VEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRI 424
A + L + N +++ + + V S G +IGK G +NE++ T A+V +
Sbjct: 486 FKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEVIV 545
Query: 425 SKGDKPKCADANDE-LVEVVGEVGSVRDALVQI 456
+ P D N+E +V ++G + + A +I
Sbjct: 546 PRDQTP---DENEEVIVRIIGHFFASQTAQRKI 575
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 58/148 (39%), Gaps = 24/148 (16%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPF-PGAKDRVVTIYSHVKDK 93
E I + P +G++IGK G I + + A +K+ P +R+V I
Sbjct: 426 EQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII------- 478
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
+A K I + + K + K E I VPSS +
Sbjct: 479 ---------------TGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGR 523
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+IGK G T+ L++ T + + P+D +
Sbjct: 524 VIGKGGKTVNELQNLTSAEV-IVPRDQT 550
Score = 38.9 bits (89), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 63/138 (45%), Gaps = 24/138 (17%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKEDVEV 98
RIL P +G++IGK G I +I ++T++RV + GA ++ VTI++
Sbjct: 197 RILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHA---------- 246
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
E A +L++ A ++ K E+ +IL + +IGK
Sbjct: 247 -----TPEGTSEACRMILEIMQKEA--------DETKLAEEIPLKILAHNGLVGRLIGKE 293
Query: 159 GATIKRLRSKTRTSIKVT 176
G +K++ +T T I ++
Sbjct: 294 GRNLKKIEHETGTKITIS 311
>gi|321257616|ref|XP_003193652.1| cytoplasm protein [Cryptococcus gattii WM276]
gi|317460122|gb|ADV21865.1| Cytoplasm protein, putative [Cryptococcus gattii WM276]
Length = 367
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 155/341 (45%), Gaps = 57/341 (16%)
Query: 306 EELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDD 365
+L +R L + G +IGK G TI +IR ++G + V + V++VT D
Sbjct: 29 HQLSLRSLVSTKEAGIIIGKSGATIAAIRDSTGVKAGVSKVVQGVQDRVLSVTG-----D 83
Query: 366 IKSMAVE----AVLLLQTKINDED------DDTVTIRLLVSSKVIGCIIGKSGSIINEIR 415
++ +A A LLL+T ++D +IRLL+S ++G +IG+SG I +I+
Sbjct: 84 LEGVASAYAEVARLLLETPLSDSSLPPPPVGSFTSIRLLISHNLMGTVIGRSGLKIKQIQ 143
Query: 416 KRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSR--- 472
+ A + SK P+ + + +VEV G V +++ A+++I L +D DR
Sbjct: 144 DMSGARMVASKEMLPQ---STERVVEVQGSVDAIKTAVLEIGKCLLED--WDRGAGTVLY 198
Query: 473 NPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMG 532
+P D +G G +A +GS G+ +S G+G S
Sbjct: 199 HPGAAGDAGVLAG------------------GLGAQAVTGSTGGIRRTSVAAGFGGYSGD 240
Query: 533 DSPY--GSMS-----------SYSSKLYGGLPPPLTLEVLVPANAVGKVI--GKAGSNLA 577
P GS+S S ++ P T + +P++ VG +I G+ GS +
Sbjct: 241 RRPSRGGSISGPSGVSGERKPSEGPQVNLNDPNLRTQNISIPSDMVGCIIISGRGGSKIT 300
Query: 578 NIRKISGATIEMSD-SKSSRGDRVALISGTPEQKRAAENLI 617
IR++SG+ I ++ G+R+ I GTPE A L+
Sbjct: 301 EIRRLSGSRISIAKVPHDETGERMFTIQGTPEATERALMLL 341
>gi|357140452|ref|XP_003571781.1| PREDICTED: uncharacterized protein LOC100836040 [Brachypodium
distachyon]
Length = 587
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 103/201 (51%), Gaps = 21/201 (10%)
Query: 27 EKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTI 86
E G + ++R+L +G++IG+ G+ + + +ET+A V+V+ A +RVV I
Sbjct: 52 ENRYPGWPGTTVFRMLISSTKVGAIIGQKGERVRRLCEETKASVRVIGGHFAAAERVVLI 111
Query: 87 YSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILV 146
++ K++ D EP+ A DALL+V+ I N +D + IL+
Sbjct: 112 FA--KEQPD----------EPIPPAMDALLRVYQNIVNDDGLGMGSDSAVVTR----ILI 155
Query: 147 PSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKK 206
PS Q+ N+IG+ G+ I + ++T I+V D + P A++ D V I G+ V+K
Sbjct: 156 PSEQALNLIGEQGSMINLIEEASQTDIRVL--DCNLP--PAALDEDRIVEIWGQPTRVRK 211
Query: 207 ALFAISAIMYKF-SPREDIPL 226
AL ++ + K+ R IPL
Sbjct: 212 ALELVARHLRKYLVDRSVIPL 232
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 99/201 (49%), Gaps = 10/201 (4%)
Query: 309 VIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKS 368
V R+L K+G +IG+ G ++ + + + A + V E V+ + A E PD+
Sbjct: 63 VFRMLISSTKVGAIIGQKGERVRRLCEETKASVRVIGGHFAAAERVVLIFAKEQPDEPIP 122
Query: 369 MAVEAVL-LLQTKINDE-----DDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADV 422
A++A+L + Q +ND+ D V R+L+ S+ +IG+ GS+IN I + ++ D+
Sbjct: 123 PAMDALLRVYQNIVNDDGLGMGSDSAVVTRILIPSEQALNLIGEQGSMINLIEEASQTDI 182
Query: 423 RISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIY 482
R+ + P A D +VE+ G+ VR AL + LR L DR P+ H+
Sbjct: 183 RVLDCNLPPAALDEDRIVEIWGQPTRVRKALELVARHLR-KYLVDRSVI---PLFDPHVP 238
Query: 483 SSGTGISMPPLLPSIPPVGPL 503
+ + + P S P GPL
Sbjct: 239 MTTSHVDTSPCYYSDHPEGPL 259
>gi|242039711|ref|XP_002467250.1| hypothetical protein SORBIDRAFT_01g022040 [Sorghum bicolor]
gi|241921104|gb|EER94248.1| hypothetical protein SORBIDRAFT_01g022040 [Sorghum bicolor]
Length = 588
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 93/194 (47%), Gaps = 14/194 (7%)
Query: 281 DTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQ 340
D+GNT S G S G G S V R+L P K+G +IG G ++ + + + A
Sbjct: 35 DSGNT--TSSAGESKYPGWPGTS-----VFRMLIPAQKVGVIIGHKGERVRRLCEETRAC 87
Query: 341 IDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVL-LLQTKINDED-----DDTVTIRLL 394
+ + E + + E P++ A++A+L + Q INDE D + R+L
Sbjct: 88 VRIIGGHLCAAEQAVIIFGREQPEEPLPPAMDALLRVYQQTINDESLDVGSDGVIVRRIL 147
Query: 395 VSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALV 454
V S+ +IG+ G +IN I + ++ D+R+ GD P A D +VE+ G V AL
Sbjct: 148 VPSEQAESLIGEHGVMINSIMEASQTDIRVLDGDLPPVALEEDRVVEIWGLPARVHKALE 207
Query: 455 QIILRLRDDALKDR 468
+ LR L DR
Sbjct: 208 LVASHLR-KYLVDR 220
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 113/248 (45%), Gaps = 33/248 (13%)
Query: 14 NDRDGKNQKRRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV 73
+D D N E G + ++R+L P +G +IG G+ + + +ETRA V+++
Sbjct: 32 DDEDSGNTTSSAGESKYPGWPGTSVFRMLIPAQKVGVIIGHKGERVRRLCEETRACVRII 91
Query: 74 DPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIAN--AVANATD 131
A ++ V I+ +E E EPL A DALL+V+ N ++ +D
Sbjct: 92 GGHLCAAEQAVIIFG----REQPE--------EPLPPAMDALLRVYQQTINDESLDVGSD 139
Query: 132 NDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEF 191
R+ ILVPS Q+ ++IG+ G I + ++T I+V D A+E
Sbjct: 140 GVIVRR------ILVPSEQAESLIGEHGVMINSIMEASQTDIRVLDGDLP----PVALEE 189
Query: 192 DNFVLISGESEAVKKALFAISAIMYKF-SPREDIPLETTVREAPPSIIIPSDVPI----- 245
D V I G V KAL +++ + K+ R IPL P I+ DVP
Sbjct: 190 DRVVEIWGLPARVHKALELVASHLRKYLVDRSVIPL---FDRHVPMPILHVDVPPCHYID 246
Query: 246 YPPGGLYP 253
YP G ++P
Sbjct: 247 YPEGPVHP 254
>gi|396578132|ref|NP_001257527.1| insulin-like growth factor 2 mRNA-binding protein 2 isoform 1
[Rattus norvegicus]
gi|149019899|gb|EDL78047.1| similar to IGF-II mRNA-binding protein 2 (predicted) [Rattus
norvegicus]
Length = 592
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 143/322 (44%), Gaps = 39/322 (12%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSM 369
+R+L P +G +IGK G TIK+I + + +++D+ K+N VT +P+ S
Sbjct: 189 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHR-KENSGAAEKPVTIHATPEGT-SE 246
Query: 370 AVEAVLLLQTKINDEDD--DTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKG 427
A +L + K DE + V +++L + +G +IGK G + +I T + IS
Sbjct: 247 ACRMILEIMQKEADETKLAEEVPLKILAHNGFVGRLIGKEGRNLKKIEHETGTKITISSL 306
Query: 428 DKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSGTG 487
+ + + V G + + A ++I+ +LR+ N + + + G
Sbjct: 307 QDLSIYNP-ERTITVKGTIEACASAEMEIMKKLRE-------AFENDMLAVNQQANLIPG 358
Query: 488 ISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLY 547
+++ L +G+ +L + S P+ + S Y S LY
Sbjct: 359 LNLSAL---------------GIFSTGLSVLPPPAGPRGAPPSPPYHPFATHSGYFSSLY 403
Query: 548 G-----------GLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS-S 595
P T+ + +P AVG +IGK G+++ + + +GA+I+++ ++
Sbjct: 404 PHHHFGPFPHHHSYPEQETVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPD 463
Query: 596 RGDRVALISGTPEQKRAAENLI 617
+R+ +I+G PE + A+ I
Sbjct: 464 VSERMVIITGPPEAQFKAQGRI 485
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 89/393 (22%), Positives = 151/393 (38%), Gaps = 91/393 (23%)
Query: 142 CQILVPSSQSANIIGKAGATIKRLRSKTRT-----------------SIKVTPKDASEPT 184
+ILVP+ IIGK G TIK + +T++ +I TP+ SE
Sbjct: 189 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTSE-- 246
Query: 185 HSCAMEFDNFVLISGESEAVKKA------LFAISAIMYKFSPREDIPLETTVREAPPSII 238
+C M + ++ E++ K A + A + + + +E L+ E I
Sbjct: 247 -ACRMILE---IMQKEADETKLAEEVPLKILAHNGFVGRLIGKEGRNLKKIEHETGTKIT 302
Query: 239 IPS--DVPIYPPGGLYPNADPILPSRS----VPSILGAARVPDLQGYADTGNTWP----- 287
I S D+ IY P I S + L A D+ N P
Sbjct: 303 ISSLQDLSIYNPERTITVKGTIEACASAEMEIMKKLREAFENDMLAVNQQANLIPGLNLS 362
Query: 288 ---VYSTGLSLV---------------------SGLVGA--------------SQSEELV 309
++STGLS++ SG + S E+
Sbjct: 363 ALGIFSTGLSVLPPPAGPRGAPPSPPYHPFATHSGYFSSLYPHHHFGPFPHHHSYPEQET 422
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTK--DNRDECVITVTAIESPDDIK 367
+ + P +G +IGK G IK + + +GA I + + D + VI I P + +
Sbjct: 423 VSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVI----ITGPPEAQ 478
Query: 368 SMA---VEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRI 424
A + L + N +++ + + V S G +IGK G +NE++ T A+V +
Sbjct: 479 FKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEVIV 538
Query: 425 SKGDKPKCADANDE-LVEVVGEVGSVRDALVQI 456
+ P D N+E +V ++G + + A +I
Sbjct: 539 PRDQTP---DENEEVIVRIIGHFFASQTAQRKI 568
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 10/97 (10%)
Query: 138 EKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLI 197
E+E + +P+ IIGK GA IK+L SIK+ P + + + + V+I
Sbjct: 419 EQETVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVS-------ERMVII 471
Query: 198 SGESEAVKKALFAISAIMYK---FSPREDIPLETTVR 231
+G EA KA I + + F+P+E++ LE +R
Sbjct: 472 TGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIR 508
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 56/142 (39%), Gaps = 24/142 (16%)
Query: 41 ILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPF-PGAKDRVVTIYSHVKDKEDVEVD 99
+ P +G++IGK G I + + A +K+ P +R+V I
Sbjct: 425 LFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII------------- 471
Query: 100 DEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAG 159
+A K I + + K + K E I VPSS + +IGK G
Sbjct: 472 ---------TGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGG 522
Query: 160 ATIKRLRSKTRTSIKVTPKDAS 181
T+ L++ T + + P+D +
Sbjct: 523 KTVNELQNLTSAEV-IVPRDQT 543
Score = 39.3 bits (90), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 63/138 (45%), Gaps = 24/138 (17%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKEDVEV 98
RIL P +G++IGK G I +I ++T++RV + GA ++ VTI++
Sbjct: 190 RILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHA---------- 239
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
E A +L++ A ++ K E+ +IL + +IGK
Sbjct: 240 -----TPEGTSEACRMILEIMQKEA--------DETKLAEEVPLKILAHNGFVGRLIGKE 286
Query: 159 GATIKRLRSKTRTSIKVT 176
G +K++ +T T I ++
Sbjct: 287 GRNLKKIEHETGTKITIS 304
>gi|395839831|ref|XP_003792779.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 4 [Otolemur garnettii]
Length = 574
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 151/331 (45%), Gaps = 52/331 (15%)
Query: 297 SGLVGASQSEEL--VIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECV 354
G G+SQ+ ++ +R+L P +G +IGK G TIK+I + + +++D+ K+N
Sbjct: 179 QGHGGSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIH-RKENSGAAE 237
Query: 355 ITVTAIESPDDIKSMAVEAVLLLQTKINDEDD--DTVTIRLLVSSKVIGCIIGKSGSIIN 412
VT +P+ S A +L + K DE + + +++L + ++G +IGK G +
Sbjct: 238 KPVTIHATPEGT-SEACRMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLK 296
Query: 413 EIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRD----DALK-D 467
+I T + IS + + + V G V + +A ++I+ +LR+ D L +
Sbjct: 297 KIEHETGTKITISSLQDLSIYNP-ERTITVKGTVEACANAEIEIMKKLREAFENDMLAVN 355
Query: 468 RDGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYG 527
+ + P + + TG+S+ P PP GP G A
Sbjct: 356 QQANLIPGLNLSALGIFSTGLSVLP-----PPSGPRGAPPAA------------------ 392
Query: 528 SLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATI 587
PY + P + + +P AVG +IGK G+++ + + +GA+I
Sbjct: 393 -------PYHPFA---------YPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASI 436
Query: 588 EMSDSKS-SRGDRVALISGTPEQKRAAENLI 617
+++ ++ +R+ +I+G PE + A+ I
Sbjct: 437 KIAPAEGPDVSERMVIITGPPEAQFKAQGRI 467
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 90/373 (24%), Positives = 157/373 (42%), Gaps = 74/373 (19%)
Query: 142 CQILVPSSQSANIIGKAGATIKRLRSKTRT-----------------SIKVTPKDASEPT 184
+ILVP+ IIGK G TIK + +T++ +I TP+ SE
Sbjct: 194 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTSE-- 251
Query: 185 HSCAMEFDNFVLISGESEAVKKA------LFAISAIMYKFSPREDIPLETTVREAPPSII 238
+C M + ++ E++ K A + A + ++ + +E L+ E I
Sbjct: 252 -ACRMILE---IMQKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKIT 307
Query: 239 IPS--DVPIYPP-------GGLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTWP-- 287
I S D+ IY P G + A+ + + L A D+ N P
Sbjct: 308 ISSLQDLSIYNPERTITVKGTVEACANAEI---EIMKKLREAFENDMLAVNQQANLIPGL 364
Query: 288 ------VYSTGLSLV---SGLVGA---------SQSEELVIRVLCPFNKIGRVIGKGGGT 329
++STGLS++ SG GA + E+ ++ + P +G +IGK G
Sbjct: 365 NLSALGIFSTGLSVLPPPSGPRGAPPAAPYHPFAYPEQEIVNLFIPTQAVGAIIGKKGAH 424
Query: 330 IKSIRQASGAQIDVDDTK--DNRDECVITVTAIESPDDIKSMA---VEAVLLLQTKINDE 384
IK + + +GA I + + D + VI I P + + A + L + N +
Sbjct: 425 IKQLARFAGASIKIAPAEGPDVSERMVI----ITGPPEAQFKAQGRIFGKLKEENFFNPK 480
Query: 385 DDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDE-LVEVV 443
++ + + V S G +IGK G +NE++ T A+V + + P D N+E +V ++
Sbjct: 481 EEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEVIVPRDQTP---DENEEVIVRII 537
Query: 444 GEVGSVRDALVQI 456
G + + A +I
Sbjct: 538 GHFFASQTAQRKI 550
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 92/400 (23%), Positives = 161/400 (40%), Gaps = 88/400 (22%)
Query: 9 RSQRDNDRDGKNQKRRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRA 68
S R+ G +Q R+I+ RIL P +G++IGK G I +I ++T++
Sbjct: 174 HSSREQGHGGSSQARQID----------FPLRILVPTQFVGAIIGKEGLTIKNITKQTQS 223
Query: 69 RVKVV-DPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVA 127
RV + GA ++ VTI++ E A +L++ A
Sbjct: 224 RVDIHRKENSGAAEKPVTIHA---------------TPEGTSEACRMILEIMQKEA---- 264
Query: 128 NATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTP-KDAS--EPT 184
++ K E+ +IL + +IGK G +K++ +T T I ++ +D S P
Sbjct: 265 ----DETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPE 320
Query: 185 HSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPRED-IP---------LETTVREAP 234
+ ++ + E E +KK A M + + + IP T + P
Sbjct: 321 RTITVKGTVEACANAEIEIMKKLREAFENDMLAVNQQANLIPGLNLSALGIFSTGLSVLP 380
Query: 235 PSIIIPSDVPIYPPGGLY-PNADP-------ILPSRSVPSILG--AARVPDLQGYADTG- 283
P PS PP Y P A P +P+++V +I+G A + L +A
Sbjct: 381 P----PSGPRGAPPAAPYHPFAYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASI 436
Query: 284 ----NTWPVYSTGLSLVSG-----------LVGASQSE---------ELVIRVLCPFNKI 319
P S + +++G + G + E +L + P +
Sbjct: 437 KIAPAEGPDVSERMVIITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTA 496
Query: 320 GRVIGKGGGTIKSIRQASGAQIDV--DDTKDNRDECVITV 357
GRVIGKGG T+ ++ + A++ V D T D +E ++ +
Sbjct: 497 GRVIGKGGKTVNELQNLTSAEVIVPRDQTPDENEEVIVRI 536
>gi|322708646|gb|EFZ00223.1| hypothetical protein MAA_04000 [Metarhizium anisopliae ARSEF 23]
Length = 456
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 98/388 (25%), Positives = 162/388 (41%), Gaps = 56/388 (14%)
Query: 273 VPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEE--LVIRVLCPFNKIGRVIGKGGGTI 330
VP G +DT +T S + A+ E + IR + + +IGKGG +
Sbjct: 71 VPVTDGGSDTKAAGASNATASSDTAANSAAAHDETSWIHIRAVISSPEAATIIGKGGENV 130
Query: 331 KSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKINDEDDDTVT 390
+IR+ S A+ V D + E ++TV+ I I+++ E + T T
Sbjct: 131 SNIRKMSNAKCTVSDYQKGAVERILTVSGIAFGLIIRTLNNEPLGEASTA----SSKTYP 186
Query: 391 IRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVR 450
+RLL+ +IG IIGK G+ I EI++ + A R++ D + LV V+G +V
Sbjct: 187 LRLLIPHILIGSIIGKGGARIREIQEASGA--RLNASDSCLPMSSERSLV-VMGVADAVH 243
Query: 451 DALVQIILRLRDDALKDRDGSRNPPVGADHIYSSGT-------GISMPPLLP-------- 495
A + L + L +R G P + + SG G+ + P P
Sbjct: 244 IATYYVGSTLLEQ-LNERFGG---PAASAYATRSGAPAGSIPGGMQVVPYSPQPASGHYG 299
Query: 496 --------------SIPPVG-PLGYDQR-ADSGSGIGMLSSSSLYGYGSL---------S 530
+PP P Y A + M YG
Sbjct: 300 RPENYGRHQDRRAHHMPPATYPPHYPHNAAPPNPAMPMQYGGQQAAYGGAPHATQHMPPH 359
Query: 531 MGDSPYGSMSSYSSKLYGGLP-PPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEM 589
+G P+G + G+P PLT ++ +P + VG +IGK G + IR+ISG+ I++
Sbjct: 360 VGPQPHG--GPQGPPMQHGMPGGPLTQQIFIPNDMVGAIIGKGGQKINEIRQISGSVIKI 417
Query: 590 SDSKSSRGDRVALISGTPEQKRAAENLI 617
++ + + +R+ I+GT E R A ++
Sbjct: 418 NEPQDNSNERLVTITGTEECNRMALYML 445
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 33/47 (70%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTI 86
+I P+ ++G++IGK G+ IN IRQ + + +K+ +P + +R+VTI
Sbjct: 385 QIFIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQDNSNERLVTI 431
>gi|268567874|ref|XP_002640100.1| Hypothetical protein CBG12588 [Caenorhabditis briggsae]
Length = 398
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 93/361 (25%), Positives = 154/361 (42%), Gaps = 53/361 (14%)
Query: 298 GLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITV 357
G A Q + +R+L G +IGKGG IK +R A + V D+ N E V TV
Sbjct: 40 GFTEAIQQGKFEVRLLVSSKSAGAIIGKGGENIKRLRAEFNAHVQVPDS--NTPERVCTV 97
Query: 358 TAIESPDDIKSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKR 417
TA D+ + + +L + + N + D +R+L+ G +IG++G+ I E+R++
Sbjct: 98 TA----DEKTVLNILKDVLPRLEDNFSERDPCEVRVLIHQSHAGALIGRNGTKIKELREK 153
Query: 418 TKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVG 477
A ++I G P + D ++ GE +V + +++ L++ +K GS P +
Sbjct: 154 CSARLKIFTGCAP---GSTDRVLITSGEQKNVLAIIEEVMKELKEIPIK---GSATPYLP 207
Query: 478 ADHIYSSGTGISMPPLLP-SIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPY 536
+ H S IS P ++ GP A G G YG G+++ G P
Sbjct: 208 SFHYDPS--NISEYGGFPGNVSGGGPQNNRGPAPPRGGQGPPGGPRSYG-GAITPGGGPR 264
Query: 537 GSMSSYSSKLYGGLPP-------------PLTLEVLVPANAV------------------ 565
+ + GG P P + PANA
Sbjct: 265 SFEAGDFHQFRGGPVPGQYSMNAPGYAQGPPQGQFGAPANAGYGYGPGGGGPVTTAQVTI 324
Query: 566 -----GKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAF 620
G +IG+ G +A IR+ SGA I + S + + +R+ I GT +Q +A+ L+Q
Sbjct: 325 PSDLGGTIIGRGGERIARIRQESGAQITLEPS-NGQPERIITIKGTEQQIHSAQYLLQQC 383
Query: 621 I 621
+
Sbjct: 384 V 384
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 100/248 (40%), Gaps = 54/248 (21%)
Query: 6 KRYRSQRDNDRDGKNQKRRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQE 65
KR + DR ++++++ + E + R+L G++IGK G+ I +R E
Sbjct: 19 KREHENDEGDRSSRHKRQKTDGFTEAIQQGKFEVRLLVSSKSAGAIIGKGGENIKRLRAE 78
Query: 66 TRARVKVVDPFPGAKDRVVTIYSHVKDKEDV------EVDDEFNDKEPLCAAQDALLKVH 119
A V+V D +RV T+ + K ++ ++D F++++P
Sbjct: 79 FNAHVQVPD--SNTPERVCTVTADEKTVLNILKDVLPRLEDNFSERDPC----------- 125
Query: 120 AAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKD 179
E ++L+ S + +IG+ G IK LR K +K+
Sbjct: 126 ---------------------EVRVLIHQSHAGALIGRNGTKIKELREKCSARLKIFTGC 164
Query: 180 ASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSIII 239
A T D ++ SGE K L I +M + ++IP++ + PS
Sbjct: 165 APGST-------DRVLITSGEQ---KNVLAIIEEVMKEL---KEIPIKGSATPYLPSFHY 211
Query: 240 -PSDVPIY 246
PS++ Y
Sbjct: 212 DPSNISEY 219
>gi|126345443|ref|XP_001362482.1| PREDICTED: poly(rC)-binding protein 2-like isoform 1 [Monodelphis
domestica]
gi|351706147|gb|EHB09066.1| Poly(rC)-binding protein 2 [Heterocephalus glaber]
gi|440900676|gb|ELR51755.1| Poly(rC)-binding protein 2, partial [Bos grunniens mutus]
Length = 351
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 167/354 (47%), Gaps = 41/354 (11%)
Query: 297 SGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVIT 356
+G++ + L IR+L ++G +IGK G ++K +R+ SGA+I++ + N E +IT
Sbjct: 3 TGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIIT 60
Query: 357 VTAIESPDDIKSMAVEAVL-LLQTKINDEDDDT-------VTIRLLVSSKVIGCIIGKSG 408
+ P + A ++ L+ I+ ++ VT+RL+V + G +IGK G
Sbjct: 61 LAG---PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGG 117
Query: 409 SIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKD- 467
I EIR+ T A V+++ P ++ + + + G S+ + + QI + + + K
Sbjct: 118 CKIKEIRESTGAQVQVAGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLESPPKGV 174
Query: 468 ----RDGSRNPPV---GADHIYSSGT-GISMPPLLPSI--------PPVGPLGYD-QRAD 510
R + PV G YS+G+ S P PS+ PP+ Q A
Sbjct: 175 TIPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAI 234
Query: 511 SGSGIGMLSSSSLY-GYGSLSMGDSPYGSMSSYSSKL---YGGL---PPPLTLEVLVPAN 563
+ L ++ + ++ G++ + + S S ++ + GL + E+ +P +
Sbjct: 235 PQPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPND 294
Query: 564 AVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLI 617
+G +IG+ G+ + IR++SGA I++++ DR I+G+ A+ LI
Sbjct: 295 LIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLI 348
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 84/373 (22%), Positives = 153/373 (41%), Gaps = 88/373 (23%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH 89
E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R++T
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIIT---- 60
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAV-----ANATDNDKKRKEKEECQI 144
L +A+ K A I + + ++ T++ + ++
Sbjct: 61 ------------------LAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRL 102
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAV 204
+VP+SQ ++IGK G IK +R T ++V T + + I+G +++
Sbjct: 103 VVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNST-------ERAITIAGIPQSI 155
Query: 205 KKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGL-----------YP 253
+ + I +M + P+ T+ P PS P+ GG +P
Sbjct: 156 IECVKQICVVMLESPPK-----GVTIPYRPK----PSSSPVIFAGGQDRYSTGSDSASFP 206
Query: 254 NADPIL--------PSRSVPSILGAARVPD-----LQGYADTGNTWPVY--STGLSLV-- 296
+ P + P +I G +P L A + +P+ +TG S +
Sbjct: 207 HTTPSMCLNPDLEGPPLEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSGIES 266
Query: 297 ---------SGLVGASQ--SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDD 345
+GL ++Q S EL I P + IG +IG+ G I IRQ SGAQI + +
Sbjct: 267 SSPEVKGYWAGLDASAQTTSHELTI----PNDLIGCIIGRQGAKINEIRQMSGAQIKIAN 322
Query: 346 TKDNRDECVITVT 358
+ + +T+T
Sbjct: 323 PVEGSTDRQVTIT 335
>gi|397521979|ref|XP_003846057.1| PREDICTED: LOW QUALITY PROTEIN: poly(rC)-binding protein 2 [Pan
paniscus]
Length = 465
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 165/353 (46%), Gaps = 40/353 (11%)
Query: 297 SGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVIT 356
+G++ + L IR+L ++G +IGK G ++K +R+ SGA+I++ + N E +IT
Sbjct: 3 TGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIIT 60
Query: 357 VTAIESPDD--IKSMAV------EAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSG 408
+ P + K+ A+ E + T VT+RL+V + G +IGK G
Sbjct: 61 LAG---PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGG 117
Query: 409 SIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDD----A 464
I EIR+ T A V+++ P ++ + + + G S+ + + QI + + +
Sbjct: 118 CKIKEIRESTGAQVQVAGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLESPKGVT 174
Query: 465 LKDRDGSRNPPV---GADHIYSSGT-GISMPPLLPSI--------PPVGPLGYD-QRADS 511
+ R + PV G YS+G+ S P PS+ PP+ Q A
Sbjct: 175 IPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIP 234
Query: 512 GSGIGMLSSSSLY-GYGSLSMGDSPYGSMSSYSSKL---YGGL---PPPLTLEVLVPANA 564
+ L ++ + ++ G++ + + S S ++ + GL + E+ +P +
Sbjct: 235 QPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDL 294
Query: 565 VGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLI 617
+G +IG+ G+ + IR++SGA I++++ DR I+G+ A+ LI
Sbjct: 295 IGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLI 347
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 83/373 (22%), Positives = 150/373 (40%), Gaps = 89/373 (23%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH 89
E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R++T
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIIT---- 60
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAV-----ANATDNDKKRKEKEECQI 144
L +A+ K A I + + ++ T++ + ++
Sbjct: 61 ------------------LAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRL 102
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAV 204
+VP+SQ ++IGK G IK +R T ++V T + + I+G +++
Sbjct: 103 VVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNST-------ERAITIAGIPQSI 155
Query: 205 KKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGL-----------YP 253
+ + I +M + IP PS P+ GG +P
Sbjct: 156 IECVKQICVVMLESPKGVTIPYRPK----------PSSSPVIFAGGQDRYSTGSDSASFP 205
Query: 254 NADPIL--------PSRSVPSILGAARVPD-----LQGYADTGNTWPVY--STGLSLV-- 296
+ P + P +I G +P L A + +P+ +TG S +
Sbjct: 206 HTTPSMCLNPDLEGPPLEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSGIES 265
Query: 297 ---------SGLVGASQ--SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDD 345
+GL ++Q S EL I P + IG +IG+ G I IRQ SGAQI + +
Sbjct: 266 SSPEVKGYWAGLDASAQTTSHELTI----PNDLIGCIIGRQGAKINEIRQMSGAQIKIAN 321
Query: 346 TKDNRDECVITVT 358
+ + +T+T
Sbjct: 322 PVEGSTDRQVTIT 334
>gi|195022402|ref|XP_001985568.1| GH14429 [Drosophila grimshawi]
gi|193899050|gb|EDV97916.1| GH14429 [Drosophila grimshawi]
Length = 362
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 143/353 (40%), Gaps = 73/353 (20%)
Query: 305 SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPD 364
S L IR++ ++G +IGK G + R+ SGA+I++ D + E ++TV+ S
Sbjct: 21 SVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISD--GSCPERIVTVSGTTS-- 76
Query: 365 DIKSMAVEAVLLLQTKINDE-----------DDDTVTIRLLVSSKVIGCIIGKSGSIINE 413
A+ A L TK +E + IRL+V + G +IGKSGS I E
Sbjct: 77 -----AIFAAFTLITKKFEEWCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKE 131
Query: 414 IRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRN 473
IR+ T ++++ P ++ + V + G + + QI L + + +
Sbjct: 132 IRQNTGCSIQVASEMLP---NSTERAVTLSGSAEQITQCIYQICLVMLE----------S 178
Query: 474 PPVGADHIYSSGTGISMPPLL----------------------PSIPPVGPLGYDQRADS 511
PP GA Y ++ P +L P S
Sbjct: 179 PPRGATIPYRPKPQVTGPVILANGQAFTIQGNYAVPTQEVSKNPLASLAALGLAGMTPAS 238
Query: 512 GSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGK 571
GI + ++L G L ++ + E+ V + +G +IGK
Sbjct: 239 TGGINHTALAALAG-SQLRTANANRAQQQQH--------------EMTVSNDLIGCIIGK 283
Query: 572 AGSNLANIRKISGATIEMSDSKSSRG---DRVALISGTPEQKRAAENLIQAFI 621
G+ +A IR+ISGA I +S+ + G DR ISG P+ A+ LI I
Sbjct: 284 GGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQYLINMRI 336
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 147/340 (43%), Gaps = 46/340 (13%)
Query: 36 SVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKED 95
++ R++ +GS+IGK G+++N R+E+ A++ + D +R+VT+
Sbjct: 23 TLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDG--SCPERIVTVSGTTS---- 76
Query: 96 VEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANII 155
A A + + D K K + +++VP+SQ ++I
Sbjct: 77 --------------AIFAAFTLITKKFEEWCSQFNDVGKVGKTQIPIRLIVPASQCGSLI 122
Query: 156 GKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIM 215
GK+G+ IK +R T SI+V + T + V +SG +E + + ++ I +M
Sbjct: 123 GKSGSKIKEIRQNTGCSIQVASEMLPNST-------ERAVTLSGSAEQITQCIYQICLVM 175
Query: 216 YKFSPR-EDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVP 274
+ PR IP + P I+ ++ + G Y A P P AA
Sbjct: 176 LESPPRGATIPYRPKPQVTGPVIL--ANGQAFTIQGNY--AVPTQEVSKNPLASLAALGL 231
Query: 275 DLQGYADTGNTWPVYSTGLSLVSG----LVGASQSEELVIRVLCPFNKIGRVIGKGGGTI 330
A TG + T L+ ++G A+++++ + + IG +IGKGG I
Sbjct: 232 AGMTPASTGG---INHTALAALAGSQLRTANANRAQQQQHEMTVSNDLIGCIIGKGGTKI 288
Query: 331 KSIRQASGAQIDVDDTKD----NRDECVITVTAIESPDDI 366
IRQ SGA I + + ++ N D T+T +PD +
Sbjct: 289 AEIRQISGAMIRISNCEEREGGNTDR---TITISGNPDSV 325
>gi|432112571|gb|ELK35287.1| Poly(rC)-binding protein 2 [Myotis davidii]
Length = 453
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 159/349 (45%), Gaps = 44/349 (12%)
Query: 297 SGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVIT 356
+G++ + L IR+L ++G +IGK G ++K +R+ SGA+I++ + N E +IT
Sbjct: 3 TGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIIT 60
Query: 357 VTAIESPDD--IKSMAV------EAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSG 408
+ P + K+ A+ E + T VT+RL+V + G +IGK G
Sbjct: 61 LAG---PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGG 117
Query: 409 SIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKD- 467
I EIR+ T A V+++ P ++ + + + G S+ + + QI + + + K
Sbjct: 118 CKIKEIRESTGAQVQVAGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLESPPKGV 174
Query: 468 ----RDGSRNPPV---GADHIYSSGT-GISMPPLLPSI--------PPVGPLGYDQRADS 511
R + PV G YS+G+ S P PS+ PP+ A +
Sbjct: 175 TIPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPL-------EAYT 227
Query: 512 GSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGL---PPPLTLEVLVPANAVGKV 568
G + L L+M S + M+ ++ GL + E+ +P + +G +
Sbjct: 228 IQGQYAIPQPDLTKLHQLAMQQSHF-PMTHGNTGFSAGLDASAQTTSHELTIPNDLIGCI 286
Query: 569 IGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLI 617
IG+ G+ + I ++SGA I++++ DR I+G+ A+ LI
Sbjct: 287 IGRQGAKINEIHQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLI 335
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 80/360 (22%), Positives = 147/360 (40%), Gaps = 75/360 (20%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH 89
E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R++T
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIIT---- 60
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAV-----ANATDNDKKRKEKEECQI 144
L +A+ K A I + + ++ T++ + ++
Sbjct: 61 ------------------LAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRL 102
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAV 204
+VP+SQ ++IGK G IK +R T ++V T + + I+G +++
Sbjct: 103 VVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNST-------ERAITIAGIPQSI 155
Query: 205 KKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGL-----------YP 253
+ + I +M + P+ T+ P PS P+ GG +P
Sbjct: 156 IECVKQICVVMLESPPK-----GVTIPYRPK----PSSSPVIFAGGQDRYSTGSDSASFP 206
Query: 254 NADPIL--------PSRSVPSILGAARVPD-----LQGYADTGNTWPVYSTGLSLVSGLV 300
+ P + P +I G +P L A + +P+ +GL
Sbjct: 207 HTTPSMCLNPDLEGPPLEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSAGLD 266
Query: 301 GASQ--SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
++Q S EL I P + IG +IG+ G I I Q SGAQI + + + + +T+T
Sbjct: 267 ASAQTTSHELTI----PNDLIGCIIGRQGAKINEIHQMSGAQIKIANPVEGSTDRQVTIT 322
>gi|291327528|ref|NP_001167544.1| poly(rC)-binding protein 2 isoform 4 [Mus musculus]
gi|348581081|ref|XP_003476306.1| PREDICTED: poly(rC)-binding protein 2 isoform 4 [Cavia porcellus]
gi|74149644|dbj|BAE36444.1| unnamed protein product [Mus musculus]
gi|194378584|dbj|BAG63457.1| unnamed protein product [Homo sapiens]
gi|417398924|gb|JAA46495.1| Putative polyc-binding alphacp-1 [Desmodus rotundus]
Length = 322
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 156/332 (46%), Gaps = 37/332 (11%)
Query: 297 SGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVIT 356
+G++ + L IR+L ++G +IGK G ++K +R+ SGA+I++ + N E +IT
Sbjct: 3 TGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIIT 60
Query: 357 VTAIESPDDIKSMAVEAVL-LLQTKINDEDDDT-------VTIRLLVSSKVIGCIIGKSG 408
+ P + A ++ L+ I+ ++ VT+RL+V + G +IGK G
Sbjct: 61 LAG---PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGG 117
Query: 409 SIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDR 468
I EIR+ T A V+++ P ++ + + + G S+ + + QI + + +
Sbjct: 118 CKIKEIRESTGAQVQVAGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLETL---- 170
Query: 469 DGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGS 528
S++PP G Y PS PV + +A + G + L
Sbjct: 171 --SQSPPKGVTIPYRPK---------PSSSPV--IFAGGQAYTIQGQYAIPQPDLTKLHQ 217
Query: 529 LSMGDSPYGSMSSYSSKLYGGL---PPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGA 585
L+M S + M+ ++ GL + E+ +P + +G +IG+ G+ + IR++SGA
Sbjct: 218 LAMQQSHF-PMTHGNTGFSAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGA 276
Query: 586 TIEMSDSKSSRGDRVALISGTPEQKRAAENLI 617
I++++ DR I+G+ A+ LI
Sbjct: 277 QIKIANPVEGSTDRQVTITGSAASISLAQYLI 308
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 145/342 (42%), Gaps = 66/342 (19%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH 89
E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R++T
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIIT---- 60
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAV-----ANATDNDKKRKEKEECQI 144
L +A+ K A I + + ++ T++ + ++
Sbjct: 61 ------------------LAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRL 102
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAV 204
+VP+SQ ++IGK G IK +R T ++V T + + I+G +++
Sbjct: 103 VVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNST-------ERAITIAGIPQSI 155
Query: 205 KKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADP-ILPSRS 263
+ + I +M LET + P + IP Y P P++ P I
Sbjct: 156 IECVKQICVVM----------LETLSQSPPKGVTIP-----YRP---KPSSSPVIFAGGQ 197
Query: 264 VPSILGAARVPD-----LQGYADTGNTWPVYSTGLSLVSGLVGASQ--SEELVIRVLCPF 316
+I G +P L A + +P+ +GL ++Q S EL I P
Sbjct: 198 AYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSAGLDASAQTTSHELTI----PN 253
Query: 317 NKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
+ IG +IG+ G I IRQ SGAQI + + + + +T+T
Sbjct: 254 DLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTIT 295
>gi|168039902|ref|XP_001772435.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676232|gb|EDQ62717.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 375
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 100/194 (51%), Gaps = 17/194 (8%)
Query: 27 EKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTI 86
EK G ++R++ P +G +IG+ G+ + + +ETR+R+K+++ PG +R+V
Sbjct: 3 EKKWAGWPGDNVFRLVVPVQKVGGIIGRKGEFVKRMCEETRSRIKILEGVPGTAERIVM- 61
Query: 87 YSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVH-AAIANAVANATDND-KKRKEKEECQI 144
V +ED E + A + LL+VH I A + D + ++
Sbjct: 62 ---VSAREDPEA--------AISPAMEGLLRVHRRVIEGAEPESVDAEIAPGGAPVSSRL 110
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAV 204
LV ++Q+ ++IG+ GATIK ++ + +++V P +E CA+ D V + G+ V
Sbjct: 111 LVAATQAGSLIGRQGATIKSIQDTSGANVRVLP---AEELPLCALADDRVVEVQGDPRNV 167
Query: 205 KKALFAISAIMYKF 218
++A+ + + + KF
Sbjct: 168 QRAMELVVSHLRKF 181
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 42/68 (61%)
Query: 554 LTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAA 613
+T + +P + +IG AG+N++ +R+ SGATI + +++S G+ I G+ Q + A
Sbjct: 282 VTQHMQIPLSYADAIIGSAGANISYMRRTSGATITIQETRSVPGEMTVEIHGSASQVQTA 341
Query: 614 ENLIQAFI 621
+ LIQ F+
Sbjct: 342 QQLIQNFM 349
>gi|302655788|ref|XP_003019678.1| hypothetical protein TRV_06307 [Trichophyton verrucosum HKI 0517]
gi|291183415|gb|EFE39033.1| hypothetical protein TRV_06307 [Trichophyton verrucosum HKI 0517]
Length = 483
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 93/364 (25%), Positives = 159/364 (43%), Gaps = 74/364 (20%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSM 369
IR + + VIGKGG + IR+ SGA+ V D E ++TV+ ++
Sbjct: 133 IRAVISSAEAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSGMQD------A 186
Query: 370 AVEAVLLLQTKINDE--------DDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKAD 421
+A L+ +N+E T +RLL+ +IG IIGKSG I EI++ + A
Sbjct: 187 VAKAFGLIIRTLNNEPLEAPSTAQSKTYPLRLLIPHILIGSIIGKSGVRIREIQEASGA- 245
Query: 422 VRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHI 481
R++ D LV ++G +V A + + L + L +R G P + +
Sbjct: 246 -RLNASDSCLPLSTERSLV-ILGVADAVHIATYYVAVTLVEQ-LTERFGG---PAASAYA 299
Query: 482 YSSGTG-------ISMPPLLPSIPPVGPLGY-----------DQRADSGSGIGMLS---- 519
SG + + P +P P G G+ ++ A G G+ +
Sbjct: 300 TRSGGPAGVVPGGMQVVPYVPQ-PAGGQYGHPDSLRRNNPQANRAAPGGYGVPYMQQPAP 358
Query: 520 ------------SSSLYGY-GSLSMGDSPYGSMSSYSSKLYGG-LPP------------P 553
+S GY G+ +PYG+ L+GG +PP P
Sbjct: 359 HPHAPQPSLHYGASPRTGYTGAGPHQPAPYGA----PQPLHGGHVPPNGPPMGAAVPGQP 414
Query: 554 LTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAA 613
LT ++ +P + VG +IGK G+ + IR +SG+ I++++ + + +R+ I+GT E + A
Sbjct: 415 LTQQIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQDNSNERLVTITGTQECNQMA 474
Query: 614 ENLI 617
++
Sbjct: 475 LYML 478
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 86/382 (22%), Positives = 152/382 (39%), Gaps = 86/382 (22%)
Query: 28 KDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIY 87
+DE G V R + +VIGK G+ ++ IR+ + A+ V D GA +R++T+
Sbjct: 125 QDETG---WVHIRAVISSAEAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTV- 180
Query: 88 SHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANA--TDNDKKRKEKEECQIL 145
QDA+ K I + N + + ++L
Sbjct: 181 ---------------------SGMQDAVAKAFGLIIRTLNNEPLEAPSTAQSKTYPLRLL 219
Query: 146 VPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSC-AMEFDNFVLISGESEAV 204
+P +IIGK+G I+ ++ + + +AS+ SC + + ++I G ++AV
Sbjct: 220 IPHILIGSIIGKSGVRIREIQEASGARL-----NASD---SCLPLSTERSLVILGVADAV 271
Query: 205 KKALFAIS-AIMYKFSPREDIPLETTVREAPPSI---------IIPSDVPIYPPGGLYPN 254
A + ++ ++ + + R P + ++P VP P GG Y +
Sbjct: 272 HIATYYVAVTLVEQLTERFGGPAASAYATRSGGPAGVVPGGMQVVPY-VP-QPAGGQYGH 329
Query: 255 ADPI-----LPSRSVPSILGAARVPDLQ---------------------GYADTGNTWPV 288
D + +R+ P G VP +Q GY G P
Sbjct: 330 PDSLRRNNPQANRAAPGGYG---VPYMQQPAPHPHAPQPSLHYGASPRTGYTGAGPHQPA 386
Query: 289 -YSTGLSLVSGLV--------GASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGA 339
Y L G V A + L ++ P + +G +IGKGG I IR SG+
Sbjct: 387 PYGAPQPLHGGHVPPNGPPMGAAVPGQPLTQQIYIPNDMVGAIIGKGGAKINEIRHLSGS 446
Query: 340 QIDVDDTKDNRDECVITVTAIE 361
I +++ +DN +E ++T+T +
Sbjct: 447 VIKINEPQDNSNERLVTITGTQ 468
>gi|440469758|gb|ELQ38855.1| Poly(rC)-binding protein 3 [Magnaporthe oryzae Y34]
gi|440482264|gb|ELQ62771.1| Poly(rC)-binding protein 3 [Magnaporthe oryzae P131]
Length = 490
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 90/367 (24%), Positives = 154/367 (41%), Gaps = 69/367 (18%)
Query: 304 QSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESP 363
+S + IR + + +IGKGG + IRQ S A+ V D + E ++TV+ I
Sbjct: 122 ESAWIHIRAVISSPEAATIIGKGGENVSKIRQMSSAKCTVSDYQKGAVERILTVSGI--- 178
Query: 364 DDIKSMAVEAVLLLQTKINDE--------DDDTVTIRLLVSSKVIGCIIGKSGSIINEIR 415
+ ++A L+++T +N+E T +RLL+ +IG IIGK G+ I EI+
Sbjct: 179 --VDAVAKAFGLIIRT-LNNEPLSEPSSAHSKTYPLRLLIPHILIGSIIGKGGARIKEIQ 235
Query: 416 KRTKADVRISKGDKP----------KCADA----------------NDELVEVVGEVGSV 449
+ + A + S P ADA ND +
Sbjct: 236 EASGARLNASDSCLPLSSERSLVVMGVADAVHIATYYVGSTLLEQLNDRFGGPAASAYAT 295
Query: 450 R--------DALVQIILRLRDDA-----LKDRDGSR-NPPVGADHIYSSGTGISMPPLLP 495
R +Q++ L A +D G R +P G ++ P P
Sbjct: 296 RAGGPVGAVPGGMQVVPYLPQPAGGNYGNRDNYGRRPDPRAGQMPPPAAHPYAPQNPYAP 355
Query: 496 SIP-PVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPP- 553
P P P Y +A + G + G+ + +P+ M +G +P P
Sbjct: 356 HQPNPAVPPHYGAQAGA---YGAHVPAPHVGHAGPQVHGAPHQPM-------HGQMPGPG 405
Query: 554 ---LTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQK 610
LT ++ +P + VG +IGK G + IR++SG+ I++++ + + +R+ I+GT E
Sbjct: 406 GASLTQQIYIPNDMVGAIIGKGGQKINEIRQVSGSVIKINEPQDNSNERLVTITGTEECN 465
Query: 611 RAAENLI 617
R A ++
Sbjct: 466 RMALYML 472
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 87/382 (22%), Positives = 155/382 (40%), Gaps = 86/382 (22%)
Query: 50 SVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLC 109
++IGK G+ ++ IRQ + A+ V D GA +R++T+ V
Sbjct: 139 TIIGKGGENVSKIRQMSSAKCTVSDYQKGAVERILTVSGIV------------------- 179
Query: 110 AAQDALLKVHAAIANAVANA--TDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRS 167
DA+ K I + N ++ + ++L+P +IIGK GA IK ++
Sbjct: 180 ---DAVAKAFGLIIRTLNNEPLSEPSSAHSKTYPLRLLIPHILIGSIIGKGGARIKEIQE 236
Query: 168 KTRTSIKVTPKDASEPTHSC-AMEFDNFVLISGESEAVKKALFAI-SAIMYKFSPREDIP 225
+ + +AS+ SC + + +++ G ++AV A + + S ++ + + R P
Sbjct: 237 ASGARL-----NASD---SCLPLSSERSLVVMGVADAVHIATYYVGSTLLEQLNDRFGGP 288
Query: 226 ----LETTVREAPPSIIIPSDVPIY---PPGGLYPNAD---------------------- 256
T ++ V Y P GG Y N D
Sbjct: 289 AASAYATRAGGPVGAVPGGMQVVPYLPQPAGGNYGNRDNYGRRPDPRAGQMPPPAAHPYA 348
Query: 257 ------PILPSRSVPSILGA------ARVPDLQGYADTGNTWP-VYSTGLSLVSGLVGAS 303
P P+ +VP GA A VP G+ P V+ + G +
Sbjct: 349 PQNPYAPHQPNPAVPPHYGAQAGAYGAHVPAPH----VGHAGPQVHGAPHQPMHGQMPGP 404
Query: 304 QSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESP 363
L ++ P + +G +IGKGG I IRQ SG+ I +++ +DN +E ++T+T E
Sbjct: 405 GGASLTQQIYIPNDMVGAIIGKGGQKINEIRQVSGSVIKINEPQDNSNERLVTITGTEEC 464
Query: 364 DDIKSMAVEAVLLLQTKINDED 385
+ + A+ +L +++ D
Sbjct: 465 NRM------ALYMLYSRLGPND 480
Score = 42.4 bits (98), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 35/51 (68%)
Query: 36 SVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTI 86
S+ +I P+ ++G++IGK G+ IN IRQ + + +K+ +P + +R+VTI
Sbjct: 408 SLTQQIYIPNDMVGAIIGKGGQKINEIRQVSGSVIKINEPQDNSNERLVTI 458
>gi|389641821|ref|XP_003718543.1| Poly(rC)-binding protein 3 [Magnaporthe oryzae 70-15]
gi|351641096|gb|EHA48959.1| Poly(rC)-binding protein 3 [Magnaporthe oryzae 70-15]
Length = 483
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 90/367 (24%), Positives = 154/367 (41%), Gaps = 69/367 (18%)
Query: 304 QSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESP 363
+S + IR + + +IGKGG + IRQ S A+ V D + E ++TV+ I
Sbjct: 122 ESAWIHIRAVISSPEAATIIGKGGENVSKIRQMSSAKCTVSDYQKGAVERILTVSGI--- 178
Query: 364 DDIKSMAVEAVLLLQTKINDE--------DDDTVTIRLLVSSKVIGCIIGKSGSIINEIR 415
+ ++A L+++T +N+E T +RLL+ +IG IIGK G+ I EI+
Sbjct: 179 --VDAVAKAFGLIIRT-LNNEPLSEPSSAHSKTYPLRLLIPHILIGSIIGKGGARIKEIQ 235
Query: 416 KRTKADVRISKGDKP----------KCADA----------------NDELVEVVGEVGSV 449
+ + A + S P ADA ND +
Sbjct: 236 EASGARLNASDSCLPLSSERSLVVMGVADAVHIATYYVGSTLLEQLNDRFGGPAASAYAT 295
Query: 450 R--------DALVQIILRLRDDA-----LKDRDGSR-NPPVGADHIYSSGTGISMPPLLP 495
R +Q++ L A +D G R +P G ++ P P
Sbjct: 296 RAGGPVGAVPGGMQVVPYLPQPAGGNYGNRDNYGRRPDPRAGQMPPPAAHPYAPQNPYAP 355
Query: 496 SIP-PVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPP- 553
P P P Y +A + G + G+ + +P+ M +G +P P
Sbjct: 356 HQPNPAVPPHYGAQAGA---YGAHVPAPHVGHAGPQVHGAPHQPM-------HGQMPGPG 405
Query: 554 ---LTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQK 610
LT ++ +P + VG +IGK G + IR++SG+ I++++ + + +R+ I+GT E
Sbjct: 406 GASLTQQIYIPNDMVGAIIGKGGQKINEIRQVSGSVIKINEPQDNSNERLVTITGTEECN 465
Query: 611 RAAENLI 617
R A ++
Sbjct: 466 RMALYML 472
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 87/381 (22%), Positives = 155/381 (40%), Gaps = 86/381 (22%)
Query: 50 SVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLC 109
++IGK G+ ++ IRQ + A+ V D GA +R++T+ V
Sbjct: 139 TIIGKGGENVSKIRQMSSAKCTVSDYQKGAVERILTVSGIV------------------- 179
Query: 110 AAQDALLKVHAAIANAVANA--TDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRS 167
DA+ K I + N ++ + ++L+P +IIGK GA IK ++
Sbjct: 180 ---DAVAKAFGLIIRTLNNEPLSEPSSAHSKTYPLRLLIPHILIGSIIGKGGARIKEIQE 236
Query: 168 KTRTSIKVTPKDASEPTHSC-AMEFDNFVLISGESEAVKKALFAI-SAIMYKFSPREDIP 225
+ + +AS+ SC + + +++ G ++AV A + + S ++ + + R P
Sbjct: 237 ASGARL-----NASD---SCLPLSSERSLVVMGVADAVHIATYYVGSTLLEQLNDRFGGP 288
Query: 226 ----LETTVREAPPSIIIPSDVPIY---PPGGLYPNAD---------------------- 256
T ++ V Y P GG Y N D
Sbjct: 289 AASAYATRAGGPVGAVPGGMQVVPYLPQPAGGNYGNRDNYGRRPDPRAGQMPPPAAHPYA 348
Query: 257 ------PILPSRSVPSILGA------ARVPDLQGYADTGNTWP-VYSTGLSLVSGLVGAS 303
P P+ +VP GA A VP G+ P V+ + G +
Sbjct: 349 PQNPYAPHQPNPAVPPHYGAQAGAYGAHVPAPH----VGHAGPQVHGAPHQPMHGQMPGP 404
Query: 304 QSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESP 363
L ++ P + +G +IGKGG I IRQ SG+ I +++ +DN +E ++T+T E
Sbjct: 405 GGASLTQQIYIPNDMVGAIIGKGGQKINEIRQVSGSVIKINEPQDNSNERLVTITGTEEC 464
Query: 364 DDIKSMAVEAVLLLQTKINDE 384
+ + A+ +L +++ E
Sbjct: 465 NRM------ALYMLYSRLESE 479
Score = 42.4 bits (98), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 35/51 (68%)
Query: 36 SVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTI 86
S+ +I P+ ++G++IGK G+ IN IRQ + + +K+ +P + +R+VTI
Sbjct: 408 SLTQQIYIPNDMVGAIIGKGGQKINEIRQVSGSVIKINEPQDNSNERLVTI 458
>gi|386771590|ref|NP_001246875.1| mushroom-body expressed, isoform K [Drosophila melanogaster]
gi|383292065|gb|AFH04546.1| mushroom-body expressed, isoform K [Drosophila melanogaster]
Length = 573
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 87/372 (23%), Positives = 154/372 (41%), Gaps = 74/372 (19%)
Query: 36 SVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKED 95
++ R++ +GS+IGK G+++N R+E+ A++ + D +R+VT+
Sbjct: 23 TLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDG--SCPERIVTVSGTTN---- 76
Query: 96 VEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANII 155
A A + + D K K + +++VP+SQ ++I
Sbjct: 77 --------------AIFSAFTLITKKFEEWCSQFNDVGKVGKTQIPIRLIVPASQCGSLI 122
Query: 156 GKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIM 215
GK+G+ IK +R T SI+V + T + V +SG +E + + ++ I +M
Sbjct: 123 GKSGSKIKEIRQTTGCSIQVASEMLPNST-------ERAVTLSGSAEQITQCIYQICLVM 175
Query: 216 YKFSPR-EDIPLETTVREAPPSII-------------IPSD--VPIYP----PGGLYPN- 254
+ PR IP + P I+ +P+ P++P GGL+
Sbjct: 176 LESPPRGATIPYRPKPQVTGPVILANGQAFTIQGNYAVPTQETCPVFPLALATGGLHAGI 235
Query: 255 ---ADPILPSRSVPSILGAARVPDLQGYADTGNT-------------WPVYSTGLSLVSG 298
ADP+L + + A LQ D P + G++ +
Sbjct: 236 SGLADPLLKGAHLQGAI-PAHHHHLQQMPDVAKNPLASLAALGLAGMNPASTGGINHTAN 294
Query: 299 LVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD----NRDECV 354
+Q ++ + V + IG +IGKGG I IRQ SGA I + + ++ N D
Sbjct: 295 PANRAQQQQHEMTV--SNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDR-- 350
Query: 355 ITVTAIESPDDI 366
T+T +PD +
Sbjct: 351 -TITISGNPDSV 361
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 87/191 (45%), Gaps = 19/191 (9%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT----AIESP 363
L IR++ ++G +IGK G + R+ SGA+I++ D + E ++TV+ AI S
Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISD--GSCPERIVTVSGTTNAIFSA 81
Query: 364 DDIKSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVR 423
+ + E + + IRL+V + G +IGKSGS I EIR+ T ++
Sbjct: 82 FTLITKKFEEWCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQ 141
Query: 424 ISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYS 483
++ P ++ + V + G + + QI L + + PP GA Y
Sbjct: 142 VASEMLP---NSTERAVTLSGSAEQITQCIYQICLVMLES----------PPRGATIPYR 188
Query: 484 SGTGISMPPLL 494
++ P +L
Sbjct: 189 PKPQVTGPVIL 199
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 381 INDEDDD-TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDEL 439
I ED T+TIRL++ K +G IIGK G I+N R+ + A + IS G P + +
Sbjct: 15 IKHEDPSVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCP------ERI 68
Query: 440 VEVVGEVGSVRDALVQIILRLRDDALKDRD 469
V V G ++ A I + + + D
Sbjct: 69 VTVSGTTNAIFSAFTLITKKFEEWCSQFND 98
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 557 EVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRG---DRVALISGTPEQKRAA 613
E+ V + +G +IGK G+ +A IR+ISGA I +S+ + G DR ISG P+ A
Sbjct: 305 EMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALA 364
Query: 614 ENLI 617
+ LI
Sbjct: 365 QYLI 368
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 393 LLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDA 452
+ VS+ +IGCIIGK G+ I EIR+ + A +RIS ++ + + D + + G SV A
Sbjct: 306 MTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNT-DRTITISGNPDSV--A 362
Query: 453 LVQIILRL 460
L Q ++ +
Sbjct: 363 LAQYLINM 370
>gi|347842448|emb|CCD57020.1| similar to KH domain RNA binding protein [Botryotinia fuckeliana]
Length = 488
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 93/367 (25%), Positives = 164/367 (44%), Gaps = 66/367 (17%)
Query: 304 QSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESP 363
+S + +R + + VIGKGG + +R+ SGA+ V D + E ++TV+ +
Sbjct: 122 ESGWIHVRSVITSAEAATVIGKGGENVSLVRKLSGAKCTVSDYQKGAVERILTVSGV--- 178
Query: 364 DDIKSMAVEAVLLLQTKIN-------DEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
+ ++A L+++T N D T +RLL+ +IG IIGK G I EI++
Sbjct: 179 --VDAVAKAFGLIIRTLNNEPLEAPSDSTSKTYPLRLLIPHILIGSIIGKGGVRIKEIQE 236
Query: 417 RTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPV 476
+ A R++ D LV V+G +V A + L + L +R G P
Sbjct: 237 ASGA--RLNASDSYLPLSTERSLV-VLGVADAVHIATYYVGSTLFEQ-LTERFGG---PA 289
Query: 477 GADHIYSSGTG-------ISMPPLLPSIPPVGPLGY---DQRADSGS------------G 514
+ + SG + + P +P P G G+ +R+D GS G
Sbjct: 290 ASAYASRSGGPAGVVPGGMQVVPYVPQ-PAGGNYGHPDNHRRSDRGSHHTPGNSYAQPYG 348
Query: 515 IGMLS--------------SSSLYGYGSL------SMGDS---PYGSMSSYSSKLYGGLP 551
G S ++ GYG + G + P+G+ + G +P
Sbjct: 349 QGQAPHQQPAAAAHYGGHASPAVGGYGGVGPQQPQQAGHAVPQPHGATGPQGQPMPGAIP 408
Query: 552 -PPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQK 610
PLT ++ +P + VG +IGK G+ + IR++SG+ I++++ + + +R+ I+GT E
Sbjct: 409 GQPLTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQDNSNERLVTITGTAECN 468
Query: 611 RAAENLI 617
+ A ++
Sbjct: 469 QMALYML 475
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 48/86 (55%), Gaps = 6/86 (6%)
Query: 299 LVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
+ GA + L ++ P + +G +IGKGG I IRQ SG+ I +++ +DN +E ++T+T
Sbjct: 403 MPGAIPGQPLTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQDNSNERLVTIT 462
Query: 359 AIESPDDIKSMAVEAVLLLQTKINDE 384
+ + A+ +L +++ E
Sbjct: 463 GTAECNQM------ALYMLYSRLESE 482
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 34/52 (65%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTI 86
+ + +I P+ ++G++IGK G IN IRQ + + +K+ +P + +R+VTI
Sbjct: 410 QPLTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQDNSNERLVTI 461
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 30/44 (68%)
Query: 303 SQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDT 346
S S+ +R+L P IG +IGKGG IK I++ASGA+++ D+
Sbjct: 204 STSKTYPLRLLIPHILIGSIIGKGGVRIKEIQEASGARLNASDS 247
>gi|28317389|tpe|CAD29864.1| TPA: hnRNP-E2 b [Xenopus laevis]
Length = 319
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 154/332 (46%), Gaps = 40/332 (12%)
Query: 297 SGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVIT 356
+G++ + L IR+L ++G +IGK G ++K +R+ SGA+I++ + N E +IT
Sbjct: 3 TGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIIT 60
Query: 357 VTAIESPDDIKSMAVEAVL-LLQTKINDEDDDT-------VTIRLLVSSKVIGCIIGKSG 408
+ P + A ++ L+ I+ ++ VT+RL+V + G +IGK G
Sbjct: 61 LAG---PTNAIFKAFSMIIDKLEEDISSSMTNSTASSKPPVTLRLVVPASQCGSLIGKGG 117
Query: 409 SIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDR 468
I EIR+ T A V+++ P ++ + + + G S+ + + QI + + +
Sbjct: 118 CKIKEIRESTGAQVQVAGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLE------ 168
Query: 469 DGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGS 528
+PP G Y PS PV + +A + G + L
Sbjct: 169 ----SPPKGVTIPYRPK---------PSSSPV--IFAGGQAYTIQGQYAIPQPDLTKLHQ 213
Query: 529 LSMGDSPYGSMSSYSSKLYGGL---PPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGA 585
L+M S + S ++ GG+ + E+ +P + +G +IG+ G+ + IR++SGA
Sbjct: 214 LAMQQSHFPMSHSGNTGFSGGIDASAQATSHELTIPNDLIGCIIGRQGAKINEIRQMSGA 273
Query: 586 TIEMSDSKSSRGDRVALISGTPEQKRAAENLI 617
I++++ DR I+G+ A+ LI
Sbjct: 274 QIKIANPVEGSNDRQVTITGSTASISLAQYLI 305
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 147/341 (43%), Gaps = 65/341 (19%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH 89
E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R++T
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIIT---- 60
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAV-----ANATDNDKKRKEKEECQI 144
L +A+ K + I + + ++ T++ K ++
Sbjct: 61 ------------------LAGPTNAIFKAFSMIIDKLEEDISSSMTNSTASSKPPVTLRL 102
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAV 204
+VP+SQ ++IGK G IK +R T ++V T + + I+G +++
Sbjct: 103 VVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNST-------ERAITIAGIPQSI 155
Query: 205 KKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSV 264
+ + I +M + P+ T+ P PS P+ GG A I ++
Sbjct: 156 IECVKQICVVMLESPPK-----GVTIPYRPK----PSSSPVIFAGG---QAYTIQGQYAI 203
Query: 265 PSILGAARVPD---LQGYADTGNTWPVYSTGLSLVSGLVGAS---QSEELVIRVLCPFNK 318
P PD L A + +P+ +G + SG + AS S EL I P +
Sbjct: 204 PQ-------PDLTKLHQLAMQQSHFPMSHSGNTGFSGGIDASAQATSHELTI----PNDL 252
Query: 319 IGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTA 359
IG +IG+ G I IRQ SGAQI + + + ++ +T+T
Sbjct: 253 IGCIIGRQGAKINEIRQMSGAQIKIANPVEGSNDRQVTITG 293
>gi|327267261|ref|XP_003218421.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Anolis carolinensis]
Length = 576
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 153/327 (46%), Gaps = 52/327 (15%)
Query: 301 GASQSEEL--VIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
G+SQ ++L +R+L P +G +IGK G TIK++ + + +++D+ K+N +T
Sbjct: 184 GSSQPKQLDFPLRILVPTQFVGAIIGKEGLTIKNLTKQTQSKVDI-HRKENAGAAEKPIT 242
Query: 359 AIESPDDIKSMAVEAVLLLQTKINDEDD--DTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
+P+ S A +L + K +E + + +++L + ++G +IGK G + +I +
Sbjct: 243 IHATPEGC-SEACRMILDIMQKEAEETKSAEEIPLKILAHNSLVGRLIGKEGRNLKKIEQ 301
Query: 417 RTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKD-----RDGS 471
T + IS + + + V G + + +A +I+ +LR+ D + +
Sbjct: 302 DTGTKITISPLQDLTIYNP-ERTITVKGSIEACSNAEAEIMNKLREAYENDIVTVNQQAN 360
Query: 472 RNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSM 531
P + + + TG+SM P SG+G+ + S+ Y
Sbjct: 361 LIPGLNLNALGIFSTGLSMLP------------------SGTGVRRPAVSTPY------- 395
Query: 532 GDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSD 591
+P+ +P + + +P AVG +IGK G ++ + + +GA+I+++
Sbjct: 396 --NPF------------AVPEQEVVNLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAP 441
Query: 592 SKSSRG-DRVALISGTPEQKRAAENLI 617
++S +R+ +I+G PE + A+ I
Sbjct: 442 AESPEASERMVIITGPPEAQFKAQGRI 468
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 89/375 (23%), Positives = 159/375 (42%), Gaps = 78/375 (20%)
Query: 142 CQILVPSSQSANIIGKAGATIKRLRSKTRT-----------------SIKVTPKDASEPT 184
+ILVP+ IIGK G TIK L +T++ +I TP+ SE
Sbjct: 195 LRILVPTQFVGAIIGKEGLTIKNLTKQTQSKVDIHRKENAGAAEKPITIHATPEGCSE-- 252
Query: 185 HSCAMEFDNFVLISGESEAVKKA------LFAISAIMYKFSPREDIPLETTVREAPPSII 238
+C M D ++ E+E K A + A ++++ + +E L+ ++ I
Sbjct: 253 -ACRMILD---IMQKEAEETKSAEEIPLKILAHNSLVGRLIGKEGRNLKKIEQDTGTKIT 308
Query: 239 IP--SDVPIYPP-------GGLYP--NADPILPSRSVPSILGAARVPDLQGYADTGNTWP 287
I D+ IY P G + NA+ + ++ L A D+ N P
Sbjct: 309 ISPLQDLTIYNPERTITVKGSIEACSNAEAEIMNK-----LREAYENDIVTVNQQANLIP 363
Query: 288 --------VYSTGLSLVSGLVGASQS------------EELVIRVLCPFNKIGRVIGKGG 327
++STGLS++ G + E+ V+ + P +G +IGK G
Sbjct: 364 GLNLNALGIFSTGLSMLPSGTGVRRPAVSTPYNPFAVPEQEVVNLFIPTQAVGAIIGKKG 423
Query: 328 GTIKSIRQASGAQIDVD--DTKDNRDECVITVTAIESPDDIKSMA---VEAVLLLQTKIN 382
IK + + +GA I + ++ + + VI I P + + A + L + N
Sbjct: 424 QHIKQLARFAGASIKIAPAESPEASERMVI----ITGPPEAQFKAQGRIFGKLKEENFFN 479
Query: 383 DEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDE-LVE 441
+++ + + V S G +IGK G +NE++ T A+V + + P D N+E +V+
Sbjct: 480 PKEEVKLEAHIKVPSSAAGRVIGKGGKTVNELQNLTSAEVIVPRDQTP---DENEEVVVK 536
Query: 442 VVGEVGSVRDALVQI 456
++G + + A +I
Sbjct: 537 IIGHFFASQTAQRKI 551
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 98/236 (41%), Gaps = 39/236 (16%)
Query: 27 EKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAK----DR 82
E +E + E + +IL + ++G +IGK G+ + I Q+T ++ + P +R
Sbjct: 264 EAEETKSAEEIPLKILAHNSLVGRLIGKEGRNLKKIEQDTGTKI-TISPLQDLTIYNPER 322
Query: 83 VVTIYSHVKDKEDVEVD-----DEFNDKEPLCAAQDA-------------------LLKV 118
+T+ ++ + E + E + + + Q A +L
Sbjct: 323 TITVKGSIEACSNAEAEIMNKLREAYENDIVTVNQQANLIPGLNLNALGIFSTGLSMLPS 382
Query: 119 HAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPK 178
+ + N E+E + +P+ IIGK G IK+L SIK+ P
Sbjct: 383 GTGVRRPAVSTPYNPFAVPEQEVVNLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPA 442
Query: 179 DASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYK---FSPREDIPLETTVR 231
++ E + + V+I+G EA KA I + + F+P+E++ LE ++
Sbjct: 443 ESPEAS-------ERMVIITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIK 491
Score = 43.1 bits (100), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 60/148 (40%), Gaps = 24/148 (16%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDP-FPGAKDRVVTIYSHVKDK 93
E + + P +G++IGK G+ I + + A +K+ P A +R+V I
Sbjct: 402 EQEVVNLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAESPEASERMVII------- 454
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
+A K I + + K + K E I VPSS +
Sbjct: 455 ---------------TGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIKVPSSAAGR 499
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+IGK G T+ L++ T + + P+D +
Sbjct: 500 VIGKGGKTVNELQNLTSAEV-IVPRDQT 526
>gi|320591828|gb|EFX04267.1| kh domain containing RNA-binding protein [Grosmannia clavigera
kw1407]
Length = 476
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 91/368 (24%), Positives = 162/368 (44%), Gaps = 69/368 (18%)
Query: 304 QSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESP 363
++ + IR + + +IGKGG + IRQ S A+ V D + E ++TV+ +
Sbjct: 113 ETSWIHIRAVISSPEAATIIGKGGENVSKIRQMSNAKCTVSDYQKGAVERILTVSGV--- 169
Query: 364 DDIKSMAVEAVLLLQTKINDE--------DDDTVTIRLLVSSKVIGCIIGKSGSIINEIR 415
+ ++A L+++T +N+E T +RLL+ +IG IIGK GS I EI+
Sbjct: 170 --VDAVAKAFGLIIRT-LNNEPLGEPSNAHSKTYPLRLLIPHILIGSIIGKGGSRIKEIQ 226
Query: 416 KRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPP 475
+ + A R++ D + LV V+G +V A + L + L +R G P
Sbjct: 227 EASGA--RLNASDSCLPMSSERSLV-VMGVADAVHIATYYVGSTLLEQ-LNERFGG---P 279
Query: 476 VGADHI-------YSSGTGISMPPLLPSIPPVGPLG----YDQRADSGSGIGMLSSSSLY 524
+ + G+ + P LP P G G Y +R D + + + Y
Sbjct: 280 AASAYAARGGGPVGVVPGGMQVVPYLPQ-PAGGSYGRTENYSRRQDPRAQLPPQGYGAPY 338
Query: 525 GYGSLSMGDSP-------------------YGSMSSYSSKLYG---GLPP---------- 552
G ++ G P + + + + + +G G PP
Sbjct: 339 G-APIAHGPGPAVPMYGAQAAGAYGAPQLPHQNAAHHGAMPHGPHAGQPPHAGPGGHPAM 397
Query: 553 ---PLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQ 609
PLT ++ +P + VG +IGK G + IR++SG+ I++++ + + +R+ I+GT E
Sbjct: 398 AGAPLTQQIYIPNDMVGAIIGKGGQKINEIRQVSGSVIKINEPQDNSNERLVTITGTEEC 457
Query: 610 KRAAENLI 617
R A ++
Sbjct: 458 NRMALYML 465
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 46/81 (56%), Gaps = 6/81 (7%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
L ++ P + +G +IGKGG I IRQ SG+ I +++ +DN +E ++T+T E + +
Sbjct: 402 LTQQIYIPNDMVGAIIGKGGQKINEIRQVSGSVIKINEPQDNSNERLVTITGTEECNRM- 460
Query: 368 SMAVEAVLLLQTKINDEDDDT 388
A+ +L +++ E T
Sbjct: 461 -----ALYMLYSRLESEKHRT 476
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 59/125 (47%), Gaps = 9/125 (7%)
Query: 345 DTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKINDEDDDT--VTIRLLVSSKVIGC 402
DTKD DE T + ES I S A QT + D+T + IR ++SS
Sbjct: 74 DTKDGEDEP--TAESTES-KAIASTASSNTAPSQTAPANAHDETSWIHIRAVISSPEAAT 130
Query: 403 IIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRD 462
IIGK G +++IR+ + A +S K A + ++ V G V +V A II L +
Sbjct: 131 IIGKGGENVSKIRQMSNAKCTVSDYQK----GAVERILTVSGVVDAVAKAFGLIIRTLNN 186
Query: 463 DALKD 467
+ L +
Sbjct: 187 EPLGE 191
Score = 42.4 bits (98), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 30/44 (68%)
Query: 303 SQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDT 346
+ S+ +R+L P IG +IGKGG IK I++ASGA+++ D+
Sbjct: 195 AHSKTYPLRLLIPHILIGSIIGKGGSRIKEIQEASGARLNASDS 238
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 33/47 (70%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTI 86
+I P+ ++G++IGK G+ IN IRQ + + +K+ +P + +R+VTI
Sbjct: 405 QIYIPNDMVGAIIGKGGQKINEIRQVSGSVIKINEPQDNSNERLVTI 451
>gi|195131533|ref|XP_002010205.1| GI15803 [Drosophila mojavensis]
gi|193908655|gb|EDW07522.1| GI15803 [Drosophila mojavensis]
Length = 596
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 142/312 (45%), Gaps = 49/312 (15%)
Query: 319 IGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQ 378
+G +IG+ G TI++I Q S A++DV K+N ++T +P++ + + ++Q
Sbjct: 87 VGAIIGRQGTTIRTITQQSRARVDVHR-KENVGSLEKSITIYGNPENCTNACKRILEVMQ 145
Query: 379 TKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDE 438
+ + + +++L + +IG IIGKSG+ I I + T + +S + + +
Sbjct: 146 QEALSTNKGEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITVSSINDINSFNL-ER 204
Query: 439 LVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSGTGISMPPLLPSIP 498
++ V G + ++ A QI +LR D +M P P
Sbjct: 205 IITVKGLIENMSRAENQISTKLRQSYENDLQ-------------------AMAPQSLMFP 245
Query: 499 PVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYS-SKLYGGLPPPL--- 554
+ P+ S G GM+ ++S+ P+ S S++ SK + PP
Sbjct: 246 GLHPMAM----MSTPGNGMVFNTSM-----------PFPSCQSFAMSKTPASVVPPAFPN 290
Query: 555 ----TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS-----SRGDRVALISG 605
T + +P NAVG +IG GS++ +I + S A+++++ + + +R I G
Sbjct: 291 DMQETTFLYIPNNAVGAIIGTKGSHIRSIMRFSSASLKIAPLDADKPLDQQTERKVTIVG 350
Query: 606 TPEQKRAAENLI 617
TPE + A+ +I
Sbjct: 351 TPEGQWKAQYMI 362
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 106/443 (23%), Positives = 191/443 (43%), Gaps = 84/443 (18%)
Query: 47 VIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDK 105
++G++IG+ G I +I Q++RARV V G+ ++ +TIY + ++ +
Sbjct: 86 MVGAIIGRQGTTIRTITQQSRARVDVHRKENVGSLEKSITIYGNPENCTNA--------- 136
Query: 106 EPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEEC-QILVPSSQSANIIGKAGATIKR 164
C +++ A N + E C +IL ++ IIGK+G TIKR
Sbjct: 137 ---CKRILEVMQQEALSTN-------------KGEICLKILAHNNLIGRIIGKSGNTIKR 180
Query: 165 LRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDI 224
+ T T I V S + + + + G E + +A IS + + S D+
Sbjct: 181 IMQDTDTKITV-----SSINDINSFNLERIITVKGLIENMSRAENQISTKLRQ-SYENDL 234
Query: 225 PLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQGYADTGN 284
AP S++ P ++P + + ++ + S+P P Q +A
Sbjct: 235 QAM-----APQSLMFPG---LHPMAMMSTPGNGMVFNTSMP-------FPSCQSFA---- 275
Query: 285 TWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQI--- 341
+ T S+V E + + P N +G +IG G I+SI + S A +
Sbjct: 276 ---MSKTPASVVPPAFPNDMQETTFLYI--PNNAVGAIIGTKGSHIRSIMRFSSASLKIA 330
Query: 342 --DVDDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKINDE------DDDTVTIRL 393
D D D + E +T+ + +P+ +A ++ K+ +E DD +T+ L
Sbjct: 331 PLDADKPLDQQTERKVTI--VGTPEG----QWKAQYMIFEKMREEGFMCGTDDVRLTVEL 384
Query: 394 LVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDEL-VEVVGEVGSVRDA 452
LV+S +G IIGK G + E+++ T + +++ + + ++E V ++G SV+ A
Sbjct: 385 LVASSQVGRIIGKGGQNVRELQRVTGSVIKLPEHALAPPSGGDEETPVHIIGPFYSVQSA 444
Query: 453 LVQIILRLRDDALKDRDGSRNPP 475
R+R L S NPP
Sbjct: 445 Q----RRIRAMML-----STNPP 458
>gi|256083125|ref|XP_002577800.1| heterogeneous nuclear ribonucleoprotein [Schistosoma mansoni]
gi|353230298|emb|CCD76469.1| putative heterogeneous nuclear ribonucleoprotein k [Schistosoma
mansoni]
Length = 371
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 87/375 (23%), Positives = 153/375 (40%), Gaps = 84/375 (22%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSM 369
+R L G +IGKGG IK IR+ ++ + D+ N E V+ + D+ S+
Sbjct: 11 LRFLISTKAAGVIIGKGGENIKKIREEYSVKVTIPDS--NGPERVLVLDG-----DLGSV 63
Query: 370 AVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDK 429
+E K+ DD V +RLLV GC+IG++G I E+R+ ++ + K +
Sbjct: 64 -IEIFRENLEKMQSNRDDGVDLRLLVHQSQAGCVIGRAGYKIKELRE--QSGLHTLKVYQ 120
Query: 430 PKCADANDELVEVVGEVGSVRDALVQIILRL---------RDDALKDRDGSRNPPVGADH 480
C + D ++++VG+VG V D L I L ++ ++ D +P G
Sbjct: 121 MLCPCSTDRVIQLVGDVGKVLDCLRSIAELLEGAPPKGSRQNYDARNADEFISPEYGGWG 180
Query: 481 IYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMS 540
+ + G G++ L+ S V Y + ++ ++G G+ G +
Sbjct: 181 VGNQGPGLN---LVRSRNNVANTSYPHNN--------ILTTGIFGGGASGATGRNGGQTT 229
Query: 541 SYSSKLYGGLPPP---------------------------------------------LT 555
S S L GGLP +
Sbjct: 230 SVSQALAGGLPHASAAAMLAATGGQTTGGPNPGTAGDAAAATAAAMVAAGLMRGLPNRMA 289
Query: 556 LEVLVPANA---------VGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGT 606
+ +L P + +G ++G++G + +R S A I++S + DR+ I+GT
Sbjct: 290 MSILTPTTSTQVSVSNKMIGAIMGRSGCRINQVRHESNADIKISKQEPGVEDRIITITGT 349
Query: 607 PEQKRAAENLIQAFI 621
PEQ + A+ L+Q +
Sbjct: 350 PEQIQNAQFLLQMCV 364
Score = 43.1 bits (100), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 48/80 (60%), Gaps = 6/80 (7%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T + ++ VS+K+IG I+G+SG IN++R + AD++ISK + D ++ + G
Sbjct: 296 TTSTQVSVSNKMIGAIMGRSGCRINQVRHESNADIKISKQE----PGVEDRIITITGTPE 351
Query: 448 SVRDA--LVQIILRLRDDAL 465
+++A L+Q+ ++ D +
Sbjct: 352 QIQNAQFLLQMCVKRYGDQI 371
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 29/40 (72%)
Query: 47 VIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTI 86
+IG+++G+SG IN +R E+ A +K+ PG +DR++TI
Sbjct: 307 MIGAIMGRSGCRINQVRHESNADIKISKQEPGVEDRIITI 346
>gi|336465527|gb|EGO53767.1| hypothetical protein NEUTE1DRAFT_119308 [Neurospora tetrasperma
FGSC 2508]
gi|350295174|gb|EGZ76151.1| eukaryotic type KH-domain (KH-domain type I) [Neurospora
tetrasperma FGSC 2509]
Length = 481
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 148/349 (42%), Gaps = 70/349 (20%)
Query: 322 VIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKI 381
+IGKGG + IR+ S A+ V D + E ++TV+ + + ++A L+++T +
Sbjct: 139 IIGKGGENVSKIREMSNAKCTVSDYQKGAVERILTVSGV-----VDAVAKAFGLIIRT-L 192
Query: 382 NDE--------DDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCA 433
N+E T +RLL+ +IG IIGK G+ I EI++ + A R++ D C
Sbjct: 193 NNEPLAEPSNTHSKTYPLRLLIPHVLIGSIIGKGGARIKEIQEASGA--RLNASD--SCL 248
Query: 434 DANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSGTGISMP-- 491
+ E VV V + + L +R G P A S G S+P
Sbjct: 249 PLSTERSLVVMGVADAVHIATYYVGSTLLEQLNERFG--GPAASAYATRSGGPAASIPGG 306
Query: 492 ----PLLPSIPPVGPLG---YDQR---ADSGSGIGMLSSSSLYGYGSL------------ 529
P +P P G G Y QR D S GM S YG+
Sbjct: 307 LQVVPYVPQ-PAGGNFGNRDYYQRNRGPDPRSHHGMPPSQYPAPYGAPHPAQPNPAVPMH 365
Query: 530 ---------------------SMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKV 568
G +P+ + + + + G LT ++ +P + VG +
Sbjct: 366 YGAHAAGGYGAAAPHVAPHVGHAGPAPHAA-GPHGAPVAGAA---LTQQIYIPNDMVGAI 421
Query: 569 IGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLI 617
IGK G + IR+ISG+ I++++ + + +R+ I+GT E R A L+
Sbjct: 422 IGKGGQKINEIRQISGSVIKINEPQDNSNERLVTITGTEECNRMALYLL 470
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 83/382 (21%), Positives = 156/382 (40%), Gaps = 89/382 (23%)
Query: 50 SVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLC 109
++IGK G+ ++ IR+ + A+ V D GA +R++T+ V
Sbjct: 138 TIIGKGGENVSKIREMSNAKCTVSDYQKGAVERILTVSGVV------------------- 178
Query: 110 AAQDALLKVHAAIANAVANA--TDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRS 167
DA+ K I + N + + ++L+P +IIGK GA IK ++
Sbjct: 179 ---DAVAKAFGLIIRTLNNEPLAEPSNTHSKTYPLRLLIPHVLIGSIIGKGGARIKEIQE 235
Query: 168 KTRTSIKVTPKDASEPTHSC-AMEFDNFVLISGESEAVKKALFAI-SAIMYKFSPREDIP 225
+ + +AS+ SC + + +++ G ++AV A + + S ++ + + R P
Sbjct: 236 ASGARL-----NASD---SCLPLSTERSLVVMGVADAVHIATYYVGSTLLEQLNERFGGP 287
Query: 226 LETT--VREAPPSIIIPSDVPI-----YPPGGLYPNADPI-------------LPSRSVP 265
+ R P+ IP + + P GG + N D +P P
Sbjct: 288 AASAYATRSGGPAASIPGGLQVVPYVPQPAGGNFGNRDYYQRNRGPDPRSHHGMPPSQYP 347
Query: 266 SILGAAR-----------------------VPDLQGYADTGNTWPVYSTGLSLVSGLVGA 302
+ GA P + + G+ P + + GA
Sbjct: 348 APYGAPHPAQPNPAVPMHYGAHAAGGYGAAAPHVAPH--VGHAGPAPHAAGPHGAPVAGA 405
Query: 303 SQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIES 362
+ ++++ I P + +G +IGKGG I IRQ SG+ I +++ +DN +E ++T+T E
Sbjct: 406 ALTQQIYI----PNDMVGAIIGKGGQKINEIRQISGSVIKINEPQDNSNERLVTITGTEE 461
Query: 363 PDDIKSMAVEAVLLLQTKINDE 384
+ + A+ LL ++ E
Sbjct: 462 CNRM------ALYLLYQRLESE 477
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 35/51 (68%)
Query: 36 SVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTI 86
++ +I P+ ++G++IGK G+ IN IRQ + + +K+ +P + +R+VTI
Sbjct: 406 ALTQQIYIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQDNSNERLVTI 456
>gi|224113143|ref|XP_002316405.1| predicted protein [Populus trichocarpa]
gi|222865445|gb|EEF02576.1| predicted protein [Populus trichocarpa]
Length = 334
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 138/320 (43%), Gaps = 49/320 (15%)
Query: 311 RVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD----NRDECVITVTAIESPDDI 366
R L G VIGKGG TI + SGA+I + + D ++ I DD+
Sbjct: 38 RFLVSNAAAGSVIGKGGATITDFQSQSGARIQLSRNYEFFPGTSDRIIMVSGGI---DDV 94
Query: 367 KSMAVEAVLL-LQTKINDEDDDT----VTIRLLVSSKVIGCIIGKSGSIINEIRKRTKAD 421
AVE ++ L ++I ED D + +RL+V + G IIGK GSII + + A
Sbjct: 95 LK-AVELIIAKLLSEIPAEDGDEAEPRMRVRLVVPNSACGSIIGKGGSIIKSFIEESHAG 153
Query: 422 VRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHI 481
++IS D K D LV V G + A+ I+ +L DD + + + P +
Sbjct: 154 IKISPLDT-KFFGLTDRLVTVTGTLEEQMHAIDLILSKLTDDPHYSQ--TMHAPFSYAGV 210
Query: 482 YSSGT-GISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMS 540
+ SG GI +LP + Y S++ G P G+
Sbjct: 211 FFSGFDGIQYACVLPYVATA------------------------AYNSMNHG--PNGAAV 244
Query: 541 SYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDS---KSSRG 597
+ + ++ + V +G V+G+ G N+ I + SGA +++SD S
Sbjct: 245 KFQ---HNKDDITNSVTIGVADEHIGLVVGRGGRNIMEISQTSGARLKISDRGDFMSGTT 301
Query: 598 DRVALISGTPEQKRAAENLI 617
DR I+G+ RAAE++I
Sbjct: 302 DRKITITGSQRAIRAAEDMI 321
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 125/320 (39%), Gaps = 60/320 (18%)
Query: 34 EESVIY-RILCPDGVIGSVIGKSGKVINSIRQETRARVKV---VDPFPGAKDRVVTIYSH 89
EE Y R L + GSVIGK G I + ++ AR+++ + FPG DR++ +
Sbjct: 31 EEKPTYTRFLVSNAAAGSVIGKGGATITDFQSQSGARIQLSRNYEFFPGTSDRIIMVSGG 90
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKE-KEECQILVPS 148
+ D L V IA ++ D E + +++VP+
Sbjct: 91 I---------------------DDVLKAVELIIAKLLSEIPAEDGDEAEPRMRVRLVVPN 129
Query: 149 SQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKAL 208
S +IIGK G+ IK ++ IK++P D T + D V ++G +++ +
Sbjct: 130 SACGSIIGKGGSIIKSFIEESHAGIKISPLD----TKFFGLT-DRLVTVTG---TLEEQM 181
Query: 209 FAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSIL 268
AI I+ K + D P + AP S G + D I + +P +
Sbjct: 182 HAIDLILSKLT---DDPHYSQTMHAPFSY----------AGVFFSGFDGIQYACVLPYVA 228
Query: 269 GAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGG 328
AA + + G + + + E IG V+G+GG
Sbjct: 229 TAAY--NSMNHGPNGAAVKFQHNKDDITNSVTIGVADEH-----------IGLVVGRGGR 275
Query: 329 TIKSIRQASGAQIDVDDTKD 348
I I Q SGA++ + D D
Sbjct: 276 NIMEISQTSGARLKISDRGD 295
>gi|347300276|ref|NP_001231441.1| poly(rC) binding protein 2 [Sus scrofa]
gi|417399505|gb|JAA46755.1| Putative polyc-binding alphacp-1 [Desmodus rotundus]
Length = 353
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 162/353 (45%), Gaps = 48/353 (13%)
Query: 297 SGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVIT 356
+G++ + L IR+L ++G +IGK G ++K +R+ SGA+I++ + N E +IT
Sbjct: 3 TGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIIT 60
Query: 357 VTAIESPDDIKSMAVEAVL-LLQTKINDEDDDT-------VTIRLLVSSKVIGCIIGKSG 408
+ P + A ++ L+ I+ ++ VT+RL+V + G +IGK G
Sbjct: 61 LAG---PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGG 117
Query: 409 SIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDD----- 463
I EIR+ T A V+++ P ++ + + + G S+ + + QI + + +
Sbjct: 118 CKIKEIRESTGAQVQVAGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLETLSQSP 174
Query: 464 ----ALKDRDGSRNPPV---GADHIYSSGT-GISMPPLLPSI--------PPVGPLGYDQ 507
+ R + PV G YS+G+ S P PS+ PP+
Sbjct: 175 PKGVTIPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPL------- 227
Query: 508 RADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGL---PPPLTLEVLVPANA 564
A + G + L L+M S + M+ ++ GL + E+ +P +
Sbjct: 228 EAYTIQGQYAIPQPDLTKLHQLAMQQSHF-PMTHGNTGFSAGLDASAQTTSHELTIPNDL 286
Query: 565 VGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLI 617
+G +IG+ G+ + IR++SGA I++++ DR I+G+ A+ LI
Sbjct: 287 IGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLI 339
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 83/365 (22%), Positives = 149/365 (40%), Gaps = 81/365 (22%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH 89
E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R++T
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIIT---- 60
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAV-----ANATDNDKKRKEKEECQI 144
L +A+ K A I + + ++ T++ + ++
Sbjct: 61 ------------------LAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRL 102
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAV 204
+VP+SQ ++IGK G IK +R T ++V T + + I+G +++
Sbjct: 103 VVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNST-------ERAITIAGIPQSI 155
Query: 205 KKALFAISAIMYKFSPREDIPLETTVREAPPSIII-----PSDVPIYPPGGL-------- 251
+ + I +M LET + P + I PS P+ GG
Sbjct: 156 IECVKQICVVM----------LETLSQSPPKGVTIPYRPKPSSSPVIFAGGQDRYSTGSD 205
Query: 252 ---YPNADPIL--------PSRSVPSILGAARVPD-----LQGYADTGNTWPVYSTGLSL 295
+P+ P + P +I G +P L A + +P+
Sbjct: 206 SASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGF 265
Query: 296 VSGLVGASQ--SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDEC 353
+GL ++Q S EL I P + IG +IG+ G I IRQ SGAQI + + + +
Sbjct: 266 SAGLDASAQTTSHELTI----PNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDR 321
Query: 354 VITVT 358
+T+T
Sbjct: 322 QVTIT 326
>gi|391338059|ref|XP_003743379.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Metaseiulus occidentalis]
Length = 707
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 140/332 (42%), Gaps = 55/332 (16%)
Query: 297 SGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDN---RDEC 353
SG VG +EL +R+L P +G +IGK G TI SI Q S A+++V+ D
Sbjct: 184 SGHVGHPPPKELPVRMLVPSEMVGAIIGKSGATITSITQQSQAKVEVNKKNAGGIFADGQ 243
Query: 354 VITVTAIESPDDIKSMAVEAVL--LLQTK-----------INDEDDDTVTIRLLVSSKVI 400
V V I ++ S A + +L +LQ + D+ +T+RLL + ++
Sbjct: 244 VDKVINIHGTNEACSQACKRILEVMLQESQQPATNTMNGGTSRRRDEPITLRLLAHNNLV 303
Query: 401 GCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRL 460
G +IG+SG +I +I + T A + +S+ P+ + ++ + G + + A QI ++
Sbjct: 304 GRVIGRSGIVIKKIMEETNAKINVSQMTDPR-----ERVIVIRGNLEEMSKAQQQITSKM 358
Query: 461 RDDALKDRDGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGY----------DQRAD 510
R +D + G G + PP IPP L Y
Sbjct: 359 RQCYEQDLQQAMMGGYG-------GPDLGPPPQ--QIPPA--LSYPFHRPPLPPPPPITH 407
Query: 511 SGSGIGMLSSSSLYGYGSLSMGDSPYG--SMSSYSSKLYGGLPPPL------TLEVLVPA 562
G + S PYG MSS S Y P+ V VP+
Sbjct: 408 PYHGGPNGHHGGPHHPSSFGPPGGPYGRIGMSSPSGHFY-----PMGDGSVEVAHVWVPS 462
Query: 563 NAVGKVIGKAGSNLANIRKISGATIEMSDSKS 594
VG +IG GS++ + + SG +I++S + +
Sbjct: 463 CTVGAIIGTGGSSIREMIRASGCSIKVSQTNA 494
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 85/182 (46%), Gaps = 27/182 (14%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVD 99
R+L P ++G++IGKSG I SI Q+++A+V+V K I++ D +VD
Sbjct: 198 RMLVPSEMVGAIIGKSGATITSITQQSQAKVEV------NKKNAGGIFA------DGQVD 245
Query: 100 DEFN---DKEPLCAAQDALLKVHAAIANAVANATDN---DKKRKEKEECQILVPSSQSAN 153
N E A +L+V + A T N ++R E ++L ++
Sbjct: 246 KVINIHGTNEACSQACKRILEVMLQESQQPATNTMNGGTSRRRDEPITLRLLAHNNLVGR 305
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISA 213
+IG++G IK++ +T I V+ ++P + ++I G E + KA I++
Sbjct: 306 VIGRSGIVIKKIMEETNAKINVS--QMTDPR-------ERVIVIRGNLEEMSKAQQQITS 356
Query: 214 IM 215
M
Sbjct: 357 KM 358
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 18/103 (17%)
Query: 14 NDRDGKNQKRRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKV- 72
N +G +RR +E + R+L + ++G VIG+SG VI I +ET A++ V
Sbjct: 278 NTMNGGTSRRR---------DEPITLRLLAHNNLVGRVIGRSGIVIKKIMEETNAKINVS 328
Query: 73 --VDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQD 113
DP ++RV+ I ++++ + + K C QD
Sbjct: 329 QMTDP----RERVIVIRGNLEEMSKAQ--QQITSKMRQCYEQD 365
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 31/43 (72%)
Query: 554 LTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSR 596
L +E+ VP+N VG++IG+ GS + ++++ SGA I++ + S R
Sbjct: 595 LRIEINVPSNQVGRIIGRGGSTVKDMQRQSGAIIKLPEETSRR 637
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 4/57 (7%)
Query: 304 QSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNR----DECVIT 356
Q L I + P N++GR+IG+GG T+K +++ SGA I + + R DE V T
Sbjct: 591 QQGHLRIEINVPSNQVGRIIGRGGSTVKDMQRQSGAIIKLPEETSRRAGSPDEAVET 647
Score = 38.9 bits (89), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 15/84 (17%)
Query: 549 GLPPP--LTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRG-------DR 599
G PPP L + +LVP+ VG +IGK+G+ + +I + S A +E+ + K++ G D+
Sbjct: 188 GHPPPKELPVRMLVPSEMVGAIIGKSGATITSITQQSQAKVEV-NKKNAGGIFADGQVDK 246
Query: 600 VALISGTPEQ-----KRAAENLIQ 618
V I GT E KR E ++Q
Sbjct: 247 VINIHGTNEACSQACKRILEVMLQ 270
>gi|85111179|ref|XP_963814.1| hypothetical protein NCU09237 [Neurospora crassa OR74A]
gi|28925551|gb|EAA34578.1| hypothetical protein NCU09237 [Neurospora crassa OR74A]
gi|38566984|emb|CAE76284.1| related to hnRNP protein E2 [Neurospora crassa]
Length = 489
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 148/349 (42%), Gaps = 70/349 (20%)
Query: 322 VIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKI 381
+IGKGG + IR+ S A+ V D + E ++TV+ + + ++A L+++T +
Sbjct: 139 IIGKGGENVSKIREMSNAKCTVSDYQKGAVERILTVSGV-----VDAVAKAFGLIIRT-L 192
Query: 382 NDE--------DDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCA 433
N+E T +RLL+ +IG IIGK G+ I EI++ + A R++ D C
Sbjct: 193 NNEPLAEPSNTHSKTYPLRLLIPHVLIGSIIGKGGARIKEIQEASGA--RLNASD--SCL 248
Query: 434 DANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSGTGISMP-- 491
+ E VV V + + L +R G P A S G S+P
Sbjct: 249 PLSTERSLVVMGVADAVHIATYYVGSTLLEQLNERFGG--PAASAYATRSGGPAASIPGG 306
Query: 492 ----PLLPSIPPVGPLG---YDQR---ADSGSGIGMLSSSSLYGYGSL------------ 529
P +P P G G Y QR D S GM S YG+
Sbjct: 307 LQVVPYVPQ-PAGGNFGNRDYYQRNRGPDPRSHHGMPPSQYPAPYGAPHPAQPNPAVPMH 365
Query: 530 ---------------------SMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKV 568
G +P+ + + + + G LT ++ +P + VG +
Sbjct: 366 YGAHAAGGYGAAAPHVAPHVGHAGPAPHAA-GPHGAPVAGAA---LTQQIYIPNDMVGAI 421
Query: 569 IGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLI 617
IGK G + IR+ISG+ I++++ + + +R+ I+GT E R A L+
Sbjct: 422 IGKGGQKINEIRQISGSVIKINEPQDNSNERLVTITGTEECNRMALYLL 470
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 79/359 (22%), Positives = 147/359 (40%), Gaps = 83/359 (23%)
Query: 50 SVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLC 109
++IGK G+ ++ IR+ + A+ V D GA +R++T+ V
Sbjct: 138 TIIGKGGENVSKIREMSNAKCTVSDYQKGAVERILTVSGVV------------------- 178
Query: 110 AAQDALLKVHAAIANAVANA--TDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRS 167
DA+ K I + N + + ++L+P +IIGK GA IK ++
Sbjct: 179 ---DAVAKAFGLIIRTLNNEPLAEPSNTHSKTYPLRLLIPHVLIGSIIGKGGARIKEIQE 235
Query: 168 KTRTSIKVTPKDASEPTHSC-AMEFDNFVLISGESEAVKKALFAI-SAIMYKFSPREDIP 225
+ + +AS+ SC + + +++ G ++AV A + + S ++ + + R P
Sbjct: 236 ASGARL-----NASD---SCLPLSTERSLVVMGVADAVHIATYYVGSTLLEQLNERFGGP 287
Query: 226 LETT--VREAPPSIIIPSDVPI-----YPPGGLYPNADPI-------------LPSRSVP 265
+ R P+ IP + + P GG + N D +P P
Sbjct: 288 AASAYATRSGGPAASIPGGLQVVPYVPQPAGGNFGNRDYYQRNRGPDPRSHHGMPPSQYP 347
Query: 266 SILGAAR-----------------------VPDLQGYADTGNTWPVYSTGLSLVSGLVGA 302
+ GA P + + G+ P + + GA
Sbjct: 348 APYGAPHPAQPNPAVPMHYGAHAAGGYGAAAPHVAPH--VGHAGPAPHAAGPHGAPVAGA 405
Query: 303 SQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIE 361
+ ++++ I P + +G +IGKGG I IRQ SG+ I +++ +DN +E ++T+T E
Sbjct: 406 ALTQQIYI----PNDMVGAIIGKGGQKINEIRQISGSVIKINEPQDNSNERLVTITGTE 460
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 35/51 (68%)
Query: 36 SVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTI 86
++ +I P+ ++G++IGK G+ IN IRQ + + +K+ +P + +R+VTI
Sbjct: 406 ALTQQIYIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQDNSNERLVTI 456
>gi|18071423|gb|AAL58282.1|AC068923_24 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 952
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 67/99 (67%), Gaps = 2/99 (2%)
Query: 347 KDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKIND-EDDDTVTIRLLVSSKVIGCIIG 405
K+ +E +I V++ E PDD S +EA++LL +K + ++ +T RL+V S +GCI+G
Sbjct: 560 KNASEERLIVVSSQEIPDDPVSPTIEALILLHSKASTLAENHQLTTRLVVPSNKVGCILG 619
Query: 406 KSGSIINEIRKRTKADVRI-SKGDKPKCADANDELVEVV 443
+ G +I E+R+RT A++R+ SK DKPK ++ELV+ +
Sbjct: 620 EGGKVITEMRRRTGAEIRVYSKADKPKYLSFDEELVQHI 658
>gi|403270472|ref|XP_003927203.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
[Saimiri boliviensis boliviensis]
Length = 585
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 150/333 (45%), Gaps = 41/333 (12%)
Query: 301 GASQSEEL--VIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
G+SQ+ ++ +R+L P +G +IGK G TIK+I + + +++D+ K+N VT
Sbjct: 171 GSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHR-KENSGAAEKPVT 229
Query: 359 AIESPDDIKSMAVEAVLLLQTKINDEDD--DTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
+P+ S A +L + K +E + + +++L + ++G +IGK G + +I
Sbjct: 230 IHATPEGT-SEACRMILEIMQKEAEETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEH 288
Query: 417 RTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPV 476
T + IS + + + V G V + A ++I+ +LR+ D
Sbjct: 289 ETGTKITISSLQDLSIYNP-ERTITVKGTVEACACAEIEIMKKLREAFENDMLAVNQ--- 344
Query: 477 GADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPY 536
L+P + + LG +G+ +LS + + P+
Sbjct: 345 -------------QANLIPGLN-LSALGI-----FSTGLSVLSPPAGPRGAPPAAPYHPF 385
Query: 537 GSMSSYSSKLY-----------GGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGA 585
+ S Y S LY P + + +P AVG +IGK G+++ + + +GA
Sbjct: 386 ATHSGYFSSLYPHHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGA 445
Query: 586 TIEMSDSKS-SRGDRVALISGTPEQKRAAENLI 617
+I+++ ++ +R+ +I+G PE + A+ I
Sbjct: 446 SIKIAPAEGPDVSERMVIITGPPEAQFKAQGRI 478
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 88/392 (22%), Positives = 152/392 (38%), Gaps = 91/392 (23%)
Query: 143 QILVPSSQSANIIGKAGATIKRLRSKTRT-----------------SIKVTPKDASEPTH 185
+ILVP+ IIGK G TIK + +T++ +I TP+ SE
Sbjct: 183 RILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTSE--- 239
Query: 186 SCAMEFDNFVLISGESEAVKKA------LFAISAIMYKFSPREDIPLETTVREAPPSIII 239
+C M + ++ E+E K A + A + ++ + +E L+ E I I
Sbjct: 240 ACRMILE---IMQKEAEETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITI 296
Query: 240 PS--DVPIYPPGGLYPNADPI----LPSRSVPSILGAARVPDLQGYADTGNTWP------ 287
S D+ IY P + + L A D+ N P
Sbjct: 297 SSLQDLSIYNPERTITVKGTVEACACAEIEIMKKLREAFENDMLAVNQQANLIPGLNLSA 356
Query: 288 --VYSTGLSLVS---------------------GLVGA--------------SQSEELVI 310
++STGLS++S G + S E+ ++
Sbjct: 357 LGIFSTGLSVLSPPAGPRGAPPAAPYHPFATHSGYFSSLYPHHQFGPFPHHHSYPEQEIV 416
Query: 311 RVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTK--DNRDECVITVTAIESPDDIKS 368
+ P +G +IGK G IK + + +GA I + + D + VI I P + +
Sbjct: 417 NLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVI----ITGPPEAQF 472
Query: 369 MA---VEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRIS 425
A + L + N +++ + + V S G +IGK G +NE++ T A+V +
Sbjct: 473 KAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEVIVP 532
Query: 426 KGDKPKCADANDE-LVEVVGEVGSVRDALVQI 456
+ P D N+E +V ++G + + A +I
Sbjct: 533 RDQTP---DENEEVIVRIIGHFFASQTAQRKI 561
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 10/97 (10%)
Query: 138 EKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLI 197
E+E + +P+ IIGK GA IK+L SIK+ P + + + + V+I
Sbjct: 412 EQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVS-------ERMVII 464
Query: 198 SGESEAVKKALFAISAIMYK---FSPREDIPLETTVR 231
+G EA KA I + + F+P+E++ LE +R
Sbjct: 465 TGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIR 501
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 58/148 (39%), Gaps = 24/148 (16%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPF-PGAKDRVVTIYSHVKDK 93
E I + P +G++IGK G I + + A +K+ P +R+V I
Sbjct: 412 EQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII------- 464
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
+A K I + + K + K E I VPSS +
Sbjct: 465 ---------------TGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGR 509
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+IGK G T+ L++ T + + P+D +
Sbjct: 510 VIGKGGKTVNELQNLTSAEV-IVPRDQT 536
>gi|14141166|ref|NP_114366.1| poly(rC)-binding protein 2 isoform b [Homo sapiens]
gi|157041229|ref|NP_001096635.1| poly(rC)-binding protein 2 isoform 1 [Mus musculus]
gi|73996203|ref|XP_534789.2| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Canis lupus
familiaris]
gi|149714829|ref|XP_001504573.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Equus caballus]
gi|297692024|ref|XP_002823365.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Pongo abelii]
gi|301775803|ref|XP_002923308.1| PREDICTED: poly(rC)-binding protein 2-like [Ailuropoda melanoleuca]
gi|332206039|ref|XP_003252097.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Nomascus
leucogenys]
gi|332839234|ref|XP_003313706.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Pan troglodytes]
gi|395541533|ref|XP_003772697.1| PREDICTED: poly(rC)-binding protein 2 [Sarcophilus harrisii]
gi|403296804|ref|XP_003939285.1| PREDICTED: poly(rC)-binding protein 2 [Saimiri boliviensis
boliviensis]
gi|410964553|ref|XP_003988818.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Felis catus]
gi|426224368|ref|XP_004006343.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Ovis aries]
gi|426372753|ref|XP_004053282.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Gorilla gorilla
gorilla]
gi|2500577|sp|Q61990.1|PCBP2_MOUSE RecName: Full=Poly(rC)-binding protein 2; AltName: Full=Alpha-CP2;
AltName: Full=CTBP; Short=CBP; AltName: Full=Putative
heterogeneous nuclear ribonucleoprotein X; Short=hnRNP X
gi|436894|gb|AAA03705.1| nucleic acid binding protein [Mus musculus]
gi|12654635|gb|AAH01155.1| Poly(rC) binding protein 2 [Homo sapiens]
gi|13172240|gb|AAK14059.1| alpha-CP2 [Mus musculus]
gi|50925529|gb|AAH78909.1| Pcbp2 protein [Rattus norvegicus]
gi|119617113|gb|EAW96707.1| poly(rC) binding protein 2, isoform CRA_b [Homo sapiens]
gi|148672029|gb|EDL03976.1| poly(rC) binding protein 2, isoform CRA_c [Mus musculus]
gi|149031920|gb|EDL86832.1| rCG50739, isoform CRA_a [Rattus norvegicus]
gi|158257714|dbj|BAF84830.1| unnamed protein product [Homo sapiens]
Length = 362
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 167/354 (47%), Gaps = 41/354 (11%)
Query: 297 SGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVIT 356
+G++ + L IR+L ++G +IGK G ++K +R+ SGA+I++ + N E +IT
Sbjct: 3 TGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIIT 60
Query: 357 VTAIESPDDIKSMAVEAVL-LLQTKINDEDDDT-------VTIRLLVSSKVIGCIIGKSG 408
+ P + A ++ L+ I+ ++ VT+RL+V + G +IGK G
Sbjct: 61 LAG---PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGG 117
Query: 409 SIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKD- 467
I EIR+ T A V+++ P ++ + + + G S+ + + QI + + + K
Sbjct: 118 CKIKEIRESTGAQVQVAGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLESPPKGV 174
Query: 468 ----RDGSRNPPV---GADHIYSSGT-GISMPPLLPSI--------PPVGPLGYD-QRAD 510
R + PV G YS+G+ S P PS+ PP+ Q A
Sbjct: 175 TIPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAI 234
Query: 511 SGSGIGMLSSSSLY-GYGSLSMGDSPYGSMSSYSSKL---YGGL---PPPLTLEVLVPAN 563
+ L ++ + ++ G++ + + S S ++ + GL + E+ +P +
Sbjct: 235 PQPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPND 294
Query: 564 AVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLI 617
+G +IG+ G+ + IR++SGA I++++ DR I+G+ A+ LI
Sbjct: 295 LIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLI 348
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 84/373 (22%), Positives = 153/373 (41%), Gaps = 88/373 (23%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH 89
E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R++T
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIIT---- 60
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAV-----ANATDNDKKRKEKEECQI 144
L +A+ K A I + + ++ T++ + ++
Sbjct: 61 ------------------LAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRL 102
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAV 204
+VP+SQ ++IGK G IK +R T ++V T + + I+G +++
Sbjct: 103 VVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNST-------ERAITIAGIPQSI 155
Query: 205 KKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGL-----------YP 253
+ + I +M + P+ T+ P PS P+ GG +P
Sbjct: 156 IECVKQICVVMLESPPK-----GVTIPYRPK----PSSSPVIFAGGQDRYSTGSDSASFP 206
Query: 254 NADPIL--------PSRSVPSILGAARVPD-----LQGYADTGNTWPVY--STGLSLV-- 296
+ P + P +I G +P L A + +P+ +TG S +
Sbjct: 207 HTTPSMCLNPDLEGPPLEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSGIES 266
Query: 297 ---------SGLVGASQ--SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDD 345
+GL ++Q S EL I P + IG +IG+ G I IRQ SGAQI + +
Sbjct: 267 SSPEVKGYWAGLDASAQTTSHELTI----PNDLIGCIIGRQGAKINEIRQMSGAQIKIAN 322
Query: 346 TKDNRDECVITVT 358
+ + +T+T
Sbjct: 323 PVEGSTDRQVTIT 335
>gi|348519761|ref|XP_003447398.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 3 [Oreochromis niloticus]
Length = 588
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 146/326 (44%), Gaps = 53/326 (16%)
Query: 304 QSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESP 363
+ + +R+L P +G +IGK G TIK + + + +++D+ K+N +T +P
Sbjct: 195 RQHDFPLRMLVPTQFVGAIIGKEGNTIKDVTKQTQSKVDI-HRKENAGAAEKPITIHSTP 253
Query: 364 DDIKSMAVEAVLLLQTKINDEDDDT--VTIRLLVSSKVIGCIIGKSGSIINEIRKRTKAD 421
+ S A +L + K +E T + +++L + ++G +IGK G + +I + T
Sbjct: 254 EGC-SAACRMILDIMQKEANETKTTEDIPLKILAHNSLVGRLIGKEGRNLKKIEEDTGTK 312
Query: 422 VRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLR-----DDALKDRDGSRNP-- 474
+ IS + + + V G + + A V+I +LR D A ++ + P
Sbjct: 313 ITISSLQDLTIYNP-ERTITVKGSIDACCKAEVEITKKLREAYENDIAAINQQANLIPGL 371
Query: 475 PVGADHIYSSGTGISMPPLLP--SIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMG 532
+ A I+SSG + P P ++P V P GY+
Sbjct: 372 NLNALGIFSSGLPVLPPAAGPRSAVPAVAPAGYN-------------------------- 405
Query: 533 DSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDS 592
P+ + +Y + +P AVG +IGK G ++ + +GA+I+++ +
Sbjct: 406 --PFLQQAPEQEVVY----------LFIPTQAVGALIGKKGQHIKQLAHFAGASIKIAPA 453
Query: 593 KS-SRGDRVALISGTPEQKRAAENLI 617
+S +R+ +I+GTPE + A+ I
Sbjct: 454 ESPDVTERMVIITGTPEAQFKAQGRI 479
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 103/462 (22%), Positives = 177/462 (38%), Gaps = 105/462 (22%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKEDVEV 98
R+L P +G++IGK G I + ++T+++V + GA ++ +TI+S
Sbjct: 202 RMLVPTQFVGAIIGKEGNTIKDVTKQTQSKVDIHRKENAGAAEKPITIHS---------- 251
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
E AA +L + A N+ K E +IL +S +IGK
Sbjct: 252 -----TPEGCSAACRMILDIMQKEA--------NETKTTEDIPLKILAHNSLVGRLIGKE 298
Query: 159 GATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKF 218
G +K++ T T I + S + + + G +A KA I+ + +
Sbjct: 299 GRNLKKIEEDTGTKITI-----SSLQDLTIYNPERTITVKGSIDACCKAEVEITKKLRE- 352
Query: 219 SPREDIPLETTVREAPPSI------IIPSDVPIYPPGGLYPNADPILPSRSVPSILGAAR 272
+ DI P + I S +P+ PP P +VP++ A
Sbjct: 353 AYENDIAAINQQANLIPGLNLNALGIFSSGLPVLPPAA--------GPRSAVPAVAPAGY 404
Query: 273 VPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKS 332
P LQ E+ V+ + P +G +IGK G IK
Sbjct: 405 NPFLQ-------------------------QAPEQEVVYLFIPTQAVGALIGKKGQHIKQ 439
Query: 333 IRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAV-----EAVLLLQTKI------ 381
+ +GA I + ESPD + M + EA Q +I
Sbjct: 440 LAHFAGASIK--------------IAPAESPDVTERMVIITGTPEAQFKAQGRIFGKLKE 485
Query: 382 ----NDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADAND 437
+ +++ + + V S G +IGK G +NE++ T A+V + + P D ND
Sbjct: 486 ENFFSAKEEVKLETHIKVPSSAAGRVIGKGGKTVNELQNLTSAEVIVPRDQTP---DEND 542
Query: 438 E-LVEVVGEVGSVRDA---LVQIILRLRDDALKDRDGSRNPP 475
E V++ G + + A + +II +++ K + G+ P
Sbjct: 543 EVFVKISGHFFASQTAQRKIREIIQQVKQQEQKHQQGAAVSP 584
Score = 45.8 bits (107), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 78/195 (40%), Gaps = 30/195 (15%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDP-FPGAKDRVVTIYS 88
++ E+ V+Y + P +G++IGK G+ I + A +K+ P +R+V I
Sbjct: 409 QQAPEQEVVY-LFIPTQAVGALIGKKGQHIKQLAHFAGASIKIAPAESPDVTERMVII-- 465
Query: 89 HVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPS 148
+A K I + K + K E I VPS
Sbjct: 466 --------------------TGTPEAQFKAQGRIFGKLKEENFFSAKEEVKLETHIKVPS 505
Query: 149 SQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKAL 208
S + +IGK G T+ L++ T + + P+D + + + FV ISG A + A
Sbjct: 506 SAAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPDEND-----EVFVKISGHFFASQTAQ 559
Query: 209 FAISAIMYKFSPRED 223
I I+ + +E
Sbjct: 560 RKIREIIQQVKQQEQ 574
>gi|222613081|gb|EEE51213.1| hypothetical protein OsJ_32035 [Oryza sativa Japonica Group]
Length = 861
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 66/97 (68%), Gaps = 2/97 (2%)
Query: 347 KDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKIND-EDDDTVTIRLLVSSKVIGCIIG 405
K+ +E +I V++ E PDD S +EA++LL +K + ++ +T RL+V S +GCI+G
Sbjct: 542 KNASEERLIVVSSQEIPDDPVSPTIEALILLHSKASTLAENHQLTTRLVVPSNKVGCILG 601
Query: 406 KSGSIINEIRKRTKADVRI-SKGDKPKCADANDELVE 441
+ G +I E+R+RT A++R+ SK DKPK ++ELV+
Sbjct: 602 EGGKVITEMRRRTGAEIRVYSKADKPKYLSFDEELVQ 638
>gi|354490197|ref|XP_003507246.1| PREDICTED: poly(rC)-binding protein 2 isoform 4 [Cricetulus
griseus]
Length = 322
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 155/332 (46%), Gaps = 37/332 (11%)
Query: 297 SGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVIT 356
+G++ + L IR+L ++G +IGK G ++K +R+ SGA+I++ + N E +IT
Sbjct: 3 TGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIIT 60
Query: 357 VTAIESPDDIKSMAVEAVL-LLQTKINDEDDDT-------VTIRLLVSSKVIGCIIGKSG 408
+ P + A ++ L+ I+ ++ VT+RL+V + G +IGK G
Sbjct: 61 LAG---PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGG 117
Query: 409 SIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDR 468
I EIR+ T A V+++ P ++ + + + G S+ + + QI + + +
Sbjct: 118 CKIKEIRESTGAQVQVAGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLETL---- 170
Query: 469 DGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGS 528
S++PP G Y PS PV + +A + G + L
Sbjct: 171 --SQSPPKGVTIPYRPK---------PSSSPV--IFAGGQAYTIQGQYAIPQPDLTKLHQ 217
Query: 529 LSMGDSPYGSMSSYSSKLYGGL---PPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGA 585
L+M S + M+ ++ GL + E+ +P + +G +IG+ G+ + IR++SGA
Sbjct: 218 LAMQQSHF-PMTHGNTGFSAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGA 276
Query: 586 TIEMSDSKSSRGDRVALISGTPEQKRAAENLI 617
I+ ++ DR I+G+ A+ LI
Sbjct: 277 QIKTANPVEGSTDRQVTITGSAASISLAQYLI 308
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 144/342 (42%), Gaps = 66/342 (19%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH 89
E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R++T
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIIT---- 60
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAV-----ANATDNDKKRKEKEECQI 144
L +A+ K A I + + ++ T++ + ++
Sbjct: 61 ------------------LAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRL 102
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAV 204
+VP+SQ ++IGK G IK +R T ++V T + + I+G +++
Sbjct: 103 VVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNST-------ERAITIAGIPQSI 155
Query: 205 KKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADP-ILPSRS 263
+ + I +M LET + P + IP Y P P++ P I
Sbjct: 156 IECVKQICVVM----------LETLSQSPPKGVTIP-----YRP---KPSSSPVIFAGGQ 197
Query: 264 VPSILGAARVPD-----LQGYADTGNTWPVYSTGLSLVSGLVGASQ--SEELVIRVLCPF 316
+I G +P L A + +P+ +GL ++Q S EL I P
Sbjct: 198 AYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSAGLDASAQTTSHELTI----PN 253
Query: 317 NKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
+ IG +IG+ G I IRQ SGAQI + + + +T+T
Sbjct: 254 DLIGCIIGRQGAKINEIRQMSGAQIKTANPVEGSTDRQVTIT 295
>gi|7671433|emb|CAB89374.1| putative protein [Arabidopsis thaliana]
Length = 567
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 79/142 (55%), Gaps = 10/142 (7%)
Query: 334 RQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKINDEDD------- 386
R + A I V D + DE ++T+TA E DI S + A++L+ + + +
Sbjct: 334 RSVTDASISVGDRHPDCDERLVTITAFEKTKDITSESQRALVLVFSNMYENATAKVLDSG 393
Query: 387 --DTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDK-PKCADANDELVEVV 443
++T RL+V S I C++G+ G I I++RT A + + ++ PKC N+++V++
Sbjct: 394 LTSSITARLVVRSNQINCLLGEEGRIKTTIQQRTGAFITVLNVEQNPKCVSENNQVVQIS 453
Query: 444 GEVGSVRDALVQIILRLRDDAL 465
GE +VR+A+ Q+ LR+D +
Sbjct: 454 GEFPNVREAINQVTSMLREDLI 475
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 64/147 (43%), Gaps = 20/147 (13%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKV-VDPFPGAKDRVVTIYSHVKDK 93
E V +RILC G VIGK G ++ + + T + + V P + R++ I+ HV
Sbjct: 28 EYVTFRILCNVSQAGHVIGKHGGMVKKLHKSTESSIWVEKTPLDDSPYRIIKIFGHVGSV 87
Query: 94 EDVEVDDEFND-----------KEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEEC 142
V++ N+ + + AQ AL++V A+ ++ C
Sbjct: 88 SRVKLGVIVNNVSNREKKEQEQEVEVSRAQYALIRVFEALNFGDCTSS--------TVSC 139
Query: 143 QILVPSSQSANIIGKAGATIKRLRSKT 169
+L+ S +IGK G ++R+ +T
Sbjct: 140 NLLMEGSHVVTVIGKNGELMQRILEET 166
>gi|315050398|ref|XP_003174573.1| Poly(rC)-binding protein 3 [Arthroderma gypseum CBS 118893]
gi|311339888|gb|EFQ99090.1| Poly(rC)-binding protein 3 [Arthroderma gypseum CBS 118893]
Length = 489
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 157/360 (43%), Gaps = 66/360 (18%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSM 369
IR + + VIGKGG + IR+ SGA+ V D E ++TV+ ++
Sbjct: 133 IRAVISSAEAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSGMQD------A 186
Query: 370 AVEAVLLLQTKINDE--------DDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKAD 421
+A L+ +N+E T +RLL+ +IG IIGKSG I EI++ + A
Sbjct: 187 VAKAFGLIIRTLNNEPLEAPSTAQSKTYPLRLLIPHILIGSIIGKSGVRIREIQEASGA- 245
Query: 422 VRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHI 481
R++ D LV ++G +V A + + L + L +R G P + +
Sbjct: 246 -RLNASDSCLPLSTERSLV-ILGVADAVHIATYYVAVTLVEQ-LTERFGG---PAASAYA 299
Query: 482 YSSGTG-------ISMPPLLPSIPPVGPLGY-----------DQRADSGSGIGMLSSSSL 523
SG + + P +P P G G+ ++ A G G+ + +
Sbjct: 300 TRSGGPAGVVPGGMQVVPYVPQ-PAGGQYGHPDTLRRNNPQANRAAPGGYGVPYMQQPAP 358
Query: 524 YGYG---SLSMGDSP---YGSMSSYSSKLYGG--------LPP------------PLTLE 557
+ + SL G SP Y + YG +PP PLT +
Sbjct: 359 HPHAPQPSLHYGASPRAGYTGAGPHQPAPYGAPQPPHGGHVPPNGPPMGAAVPGQPLTQQ 418
Query: 558 VLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLI 617
+ +P + VG +IGK G+ + IR++SG+ I++++ + + +R+ I+GT E + A ++
Sbjct: 419 IYIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQDNSNERLVTITGTQECNQMALYML 478
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 36/56 (64%)
Query: 306 EELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIE 361
+ L ++ P + +G +IGKGG I IRQ SG+ I +++ +DN +E ++T+T +
Sbjct: 413 QPLTQQIYIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQDNSNERLVTITGTQ 468
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 34/52 (65%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTI 86
+ + +I P+ ++G++IGK G IN IRQ + + +K+ +P + +R+VTI
Sbjct: 413 QPLTQQIYIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQDNSNERLVTI 464
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 10/80 (12%)
Query: 143 QILVPSSQSANIIGKAGATIKRLRSKTRTSIKVT-PKDASEPTHSCAMEFDNFVLISGES 201
QI +P+ IIGK GA I +R + + IK+ P+D S + V I+G
Sbjct: 418 QIYIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQDNSN---------ERLVTITGTQ 468
Query: 202 EAVKKALFAISAIMYKFSPR 221
E + AL+ + + + KFS R
Sbjct: 469 ECNQMALYMLYSRLGKFSSR 488
Score = 38.9 bits (89), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 303 SQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDT 346
+QS+ +R+L P IG +IGK G I+ I++ASGA+++ D+
Sbjct: 209 AQSKTYPLRLLIPHILIGSIIGKSGVRIREIQEASGARLNASDS 252
>gi|256083127|ref|XP_002577801.1| heterogeneous nuclear ribonucleoprotein [Schistosoma mansoni]
gi|353230297|emb|CCD76468.1| putative heterogeneous nuclear ribonucleoprotein k [Schistosoma
mansoni]
Length = 363
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 87/372 (23%), Positives = 152/372 (40%), Gaps = 84/372 (22%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSM 369
+R L G +IGKGG IK IR+ ++ + D+ N E V+ + D+ S+
Sbjct: 11 LRFLISTKAAGVIIGKGGENIKKIREEYSVKVTIPDS--NGPERVLVLDG-----DLGSV 63
Query: 370 AVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDK 429
+E K+ DD V +RLLV GC+IG++G I E+R+ ++ + K +
Sbjct: 64 -IEIFRENLEKMQSNRDDGVDLRLLVHQSQAGCVIGRAGYKIKELRE--QSGLHTLKVYQ 120
Query: 430 PKCADANDELVEVVGEVGSVRDALVQIILRL---------RDDALKDRDGSRNPPVGADH 480
C + D ++++VG+VG V D L I L ++ ++ D +P G
Sbjct: 121 MLCPCSTDRVIQLVGDVGKVLDCLRSIAELLEGAPPKGSRQNYDARNADEFISPEYGGWG 180
Query: 481 IYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMS 540
+ + G G++ L+ S V Y + ++ ++G G+ G +
Sbjct: 181 VGNQGPGLN---LVRSRNNVANTSYPHNN--------ILTTGIFGGGASGATGRNGGQTT 229
Query: 541 SYSSKLYGGLPPP---------------------------------------------LT 555
S S L GGLP +
Sbjct: 230 SVSQALAGGLPHASAAAMLAATGGQTTGGPNPGTAGDAAAATAAAMVAAGLMRGLPNRMA 289
Query: 556 LEVLVPANA---------VGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGT 606
+ +L P + +G ++G++G + +R S A I++S + DR+ I+GT
Sbjct: 290 MSILTPTTSTQVSVSNKMIGAIMGRSGCRINQVRHESNADIKISKQEPGVEDRIITITGT 349
Query: 607 PEQKRAAENLIQ 618
PEQ + A+ L+Q
Sbjct: 350 PEQIQNAQFLLQ 361
Score = 42.7 bits (99), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 45/73 (61%), Gaps = 6/73 (8%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T + ++ VS+K+IG I+G+SG IN++R + AD++ISK + D ++ + G
Sbjct: 296 TTSTQVSVSNKMIGAIMGRSGCRINQVRHESNADIKISKQE----PGVEDRIITITGTPE 351
Query: 448 SVRDALVQIILRL 460
+++A Q +L++
Sbjct: 352 QIQNA--QFLLQM 362
Score = 42.0 bits (97), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 29/40 (72%)
Query: 47 VIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTI 86
+IG+++G+SG IN +R E+ A +K+ PG +DR++TI
Sbjct: 307 MIGAIMGRSGCRINQVRHESNADIKISKQEPGVEDRIITI 346
>gi|322698027|gb|EFY89801.1| hypothetical protein MAC_04233 [Metarhizium acridum CQMa 102]
Length = 456
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 153/354 (43%), Gaps = 52/354 (14%)
Query: 304 QSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESP 363
++ + IR + + +IGKGG + +IR+ S A+ V D + E ++TV+ I
Sbjct: 104 ETSWIHIRAVISSPEAATIIGKGGENVSNIRKMSNAKCTVSDYQKGAVERILTVSGIAFG 163
Query: 364 DDIKSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVR 423
I+++ E + T T +RLL+ +IG IIGK G+ I EI++ + A R
Sbjct: 164 LIIRTLNNEPLGEASTA----SSKTYPLRLLIPHILIGSIIGKGGARIREIQEASGA--R 217
Query: 424 ISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYS 483
++ D + LV V+G +V A + L + L +R G P + +
Sbjct: 218 LNASDSCLPMSSERSLV-VMGVADAVHIATYYVGSTLLEQ-LNERFGG---PAASAYATR 272
Query: 484 SGT-------GISMPPLLPSIPPVGPLG--------YDQRADSGSGIGMLSSSSL----- 523
SG G+ + P P P G G D+RA
Sbjct: 273 SGAPAGSIPGGMQVVPYSPQ-PASGHYGRPENYGRHQDRRAHHMPPAAYPPHYPHNAAPP 331
Query: 524 -------YGYGSLSMGDSPYGSMS---SYSSKLYGGL--PP--------PLTLEVLVPAN 563
YG + G +P+ + + +GG PP PLT ++ +P +
Sbjct: 332 NPAMPMQYGGQQAAYGGAPHATQHMPPHVGPQPHGGPQGPPMQHGMPGGPLTQQIYIPND 391
Query: 564 AVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLI 617
VG +IGK G + IR++SG+ I++++ + + +R+ I+GT E R A ++
Sbjct: 392 MVGAIIGKGGQKINEIRQMSGSVIKINEPQDNSNERLVTITGTEECNRMALYML 445
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 84/379 (22%), Positives = 158/379 (41%), Gaps = 91/379 (24%)
Query: 50 SVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLC 109
++IGK G+ +++IR+ + A+ V D GA +R++T+ S + + N+ EPL
Sbjct: 121 TIIGKGGENVSNIRKMSNAKCTVSDYQKGAVERILTV-SGIAFGLIIRT---LNN-EPLG 175
Query: 110 AAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKT 169
A A K + ++L+P +IIGK GA I+ ++ +
Sbjct: 176 EASTASSKTYP---------------------LRLLIPHILIGSIIGKGGARIREIQEAS 214
Query: 170 RTSIKVTPKDASEPTHSC-AMEFDNFVLISGESEAVKKALFAI-SAIMYKFSPREDIPLE 227
+ +AS+ SC M + +++ G ++AV A + + S ++ + + R P
Sbjct: 215 GARL-----NASD---SCLPMSSERSLVVMGVADAVHIATYYVGSTLLEQLNERFGGPAA 266
Query: 228 TT--VREAPPSIIIPSDVPI-----YPPGGLY---------------------------P 253
+ R P+ IP + + P G Y
Sbjct: 267 SAYATRSGAPAGSIPGGMQVVPYSPQPASGHYGRPENYGRHQDRRAHHMPPAAYPPHYPH 326
Query: 254 NADPILPSRSVPSILGAARVPDLQGYADTGNTWPVY--------STGLSLVSGLVGASQS 305
NA P P+ ++P G + G P + G + G+ G +
Sbjct: 327 NAAP--PNPAMPMQYGGQQA-AYGGAPHATQHMPPHVGPQPHGGPQGPPMQHGMPGGPLT 383
Query: 306 EELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDD 365
+++ I P + +G +IGKGG I IRQ SG+ I +++ +DN +E ++T+T E +
Sbjct: 384 QQIYI----PNDMVGAIIGKGGQKINEIRQMSGSVIKINEPQDNSNERLVTITGTEECNR 439
Query: 366 IKSMAVEAVLLLQTKINDE 384
+ A+ +L +++ E
Sbjct: 440 M------ALYMLYSRLESE 452
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 33/47 (70%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTI 86
+I P+ ++G++IGK G+ IN IRQ + + +K+ +P + +R+VTI
Sbjct: 385 QIYIPNDMVGAIIGKGGQKINEIRQMSGSVIKINEPQDNSNERLVTI 431
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 44/75 (58%), Gaps = 4/75 (5%)
Query: 389 VTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGS 448
+T ++ + + ++G IIGK G INEIR+ + + ++I ++P+ ++N+ LV + G
Sbjct: 382 LTQQIYIPNDMVGAIIGKGGQKINEIRQMSGSVIKI---NEPQ-DNSNERLVTITGTEEC 437
Query: 449 VRDALVQIILRLRDD 463
R AL + RL +
Sbjct: 438 NRMALYMLYSRLESE 452
>gi|338714774|ref|XP_003363150.1| PREDICTED: poly(rC)-binding protein 4-like isoform 2 [Equus
caballus]
Length = 360
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 121/265 (45%), Gaps = 38/265 (14%)
Query: 384 EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVV 443
E T+T+R+L+ K +G IIGK G + IR+++ A + IS+G P + + +
Sbjct: 13 ELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCP------ERITTIT 66
Query: 444 GEVGSVRDALVQIILRLRDD--ALKDRDGS-RNPPVG----------ADHIYSSGTGI-- 488
G +V A+ I +L +D A GS PPV I +GT I
Sbjct: 67 GSTAAVFHAVSMIAFKLDEDLCAAPTNGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKE 126
Query: 489 --SMPPLLPSIP--PVGPLGY-----DQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSM 539
PP +IP P LG +Q G ++S+ + LS P+ S
Sbjct: 127 IRESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTSAEVTKLQQLSGHAVPFASP 186
Query: 540 SSYSSKLYGGLPPPL---TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSR 596
S + GL P + E LVP + +G VIG+ GS ++ IR++SGA I++ +
Sbjct: 187 S-----MVPGLDPGAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGA 241
Query: 597 GDRVALISGTPEQKRAAENLIQAFI 621
G+R I+G+P A+ LI A +
Sbjct: 242 GERHVTITGSPVSIALAQYLITACL 266
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 122/323 (37%), Gaps = 90/323 (27%)
Query: 36 SVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKED 95
++ R+L +GS+IGK G+ + IR+++ AR+ + + +R+ TI
Sbjct: 17 TLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE--GSCPERITTITGSTAAVFH 74
Query: 96 VEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANII 155
F E LCAA T+ + ++++P+SQ ++I
Sbjct: 75 AVSMIAFKLDEDLCAA-----------------PTNGGSVSRPPVTLRLVIPASQCGSLI 117
Query: 156 GKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIM 215
GKAG IK +R + PK A+ P H ++ +L + + +V+ A+++
Sbjct: 118 GKAGTKIKEIR-------ESPPKGATIPYHP-SLSLGTVLLSANQGFSVQGQYGAVTS-- 167
Query: 216 YKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPD 275
E L+ A P PS VP GL P A
Sbjct: 168 -----AEVTKLQQLSGHAVP-FASPSMVP-----GLDPGAQ------------------- 197
Query: 276 LQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQ 335
+ S+E ++ P + IG VIG+ G I IRQ
Sbjct: 198 ---------------------------TSSQEFLV----PNDLIGCVIGRQGSKISEIRQ 226
Query: 336 ASGAQIDVDDTKDNRDECVITVT 358
SGA I + + + E +T+T
Sbjct: 227 MSGAHIKIGNQAEGAGERHVTIT 249
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 79/173 (45%), Gaps = 24/173 (13%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
L +R+L ++G +IGK G T+K IR+ S A+I + + + E + T+T
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE--GSCPERITTITG------ST 69
Query: 368 SMAVEAVLLLQTKINDED------------DDTVTIRLLVSSKVIGCIIGKSGSIINEIR 415
+ AV ++ K+ DED VT+RL++ + G +IGK+G+ I EIR
Sbjct: 70 AAVFHAVSMIAFKL-DEDLCAAPTNGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIR 128
Query: 416 KRTKADVRISKGDKPKCAD---ANDELVEVVGEVGSVRDALVQIILRLRDDAL 465
+ I + ++ V G+ G+V A V + +L A+
Sbjct: 129 ESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTSAEVTKLQQLSGHAV 181
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 76/179 (42%), Gaps = 22/179 (12%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQA--SGAQIDVDDT--------KDNRDECV--- 354
+ +R++ P ++ G +IGK G IK IR++ GA I + N+ V
Sbjct: 102 VTLRLVIPASQCGSLIGKAGTKIKEIRESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQ 161
Query: 355 ---ITVTAIESPDDIKSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSII 411
+T + + AV D T + LV + +IGC+IG+ GS I
Sbjct: 162 YGAVTSAEVTKLQQLSGHAVPFASPSMVPGLDPGAQTSSQEFLVPNDLIGCVIGRQGSKI 221
Query: 412 NEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDG 470
+EIR+ + A ++I + A + V + G S+ AL Q ++ + K G
Sbjct: 222 SEIRQMSGAHIKIGN----QAEGAGERHVTITGSPVSI--ALAQYLITACLETAKSTSG 274
>gi|452837822|gb|EME39763.1| hypothetical protein DOTSEDRAFT_74610 [Dothistroma septosporum
NZE10]
Length = 490
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 85/364 (23%), Positives = 151/364 (41%), Gaps = 62/364 (17%)
Query: 304 QSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESP 363
+S L +R + + VIGKGG + IR+ +GA+ V + E ++TV+ +
Sbjct: 122 ESSWLHVRAIISSAEAATVIGKGGENVTQIRRMAGAKCTVSEYTRGAVERILTVSGL--- 178
Query: 364 DDIKSMAVEAVLLLQTKINDEDDD--------TVTIRLLVSSKVIGCIIGKSGSIINEIR 415
+ ++A L+++T +N E D T +RLL+ +IG IIGK G I EI+
Sbjct: 179 --VDAVAKAFGLIIRT-LNQEPLDQPSTPQSKTYPLRLLIPHILIGSIIGKQGVRIREIQ 235
Query: 416 KRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPP 475
+ + A + S+ P + + LV V+G +V A + L + + G
Sbjct: 236 EASGARLNASESCLPLSTERS--LV-VLGVADAVHIATYYVGSTLVEQLTERFGGPAASN 292
Query: 476 VGADHIYSSGTGISMPPLLPSIP------------------------PVGPLGYDQRADS 511
H G ++P +P P P G Q
Sbjct: 293 YAGRHGGPQGVVPGGMQVVPYVPQHAGGQMGHPDYNRNKQHAQPQRTPAQPYGGQQYMQG 352
Query: 512 GSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPP------------------P 553
+ + + YG GS +PY + YG P P
Sbjct: 353 QTPLPPQQAPMGYGAGSPR---APYVGAGPQQPQPYGHAAPQAHAGPPQQPMQGMVPGQP 409
Query: 554 LTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAA 613
+T ++ +P + VG +IGK G+ + IR++SG+ I++++ + + +R+ I+GT E + A
Sbjct: 410 ITQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQDNNNERLVTITGTQECNQMA 469
Query: 614 ENLI 617
++
Sbjct: 470 LYML 473
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 84/419 (20%), Positives = 161/419 (38%), Gaps = 86/419 (20%)
Query: 15 DRDGKNQKRRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVD 74
DR +++DE + R + +VIGK G+ + IR+ A+ V +
Sbjct: 107 DRQSSQAPMPYHQQDES---SWLHVRAIISSAEAATVIGKGGENVTQIRRMAGAKCTVSE 163
Query: 75 PFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDK 134
GA +R++T+ V DA+ K I + N D+
Sbjct: 164 YTRGAVERILTVSGLV----------------------DAVAKAFGLIIRTL-NQEPLDQ 200
Query: 135 KRKEKEEC---QILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSC-AME 190
+ + ++L+P +IIGK G I+ ++ + + +ASE SC +
Sbjct: 201 PSTPQSKTYPLRLLIPHILIGSIIGKQGVRIREIQEASGARL-----NASE---SCLPLS 252
Query: 191 FDNFVLISGESEAVKKALFAISAIMYK-------------FSPRED-------------- 223
+ +++ G ++AV A + + + + + ++ R
Sbjct: 253 TERSLVVLGVADAVHIATYYVGSTLVEQLTERFGGPAASNYAGRHGGPQGVVPGGMQVVP 312
Query: 224 -IPLETTVREAPPSI------IIPSDVPIYPPGGL-YPNADPILPSRSVPSILGAA--RV 273
+P + P P P P GG Y LP + P GA R
Sbjct: 313 YVPQHAGGQMGHPDYNRNKQHAQPQRTPAQPYGGQQYMQGQTPLPPQQAPMGYGAGSPRA 372
Query: 274 PDL----QGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGT 329
P + Q G+ P G + G + + ++ P + +G +IGKGG
Sbjct: 373 PYVGAGPQQPQPYGHAAPQAHAGPPQ-QPMQGMVPGQPITQQIFIPNDMVGAIIGKGGAK 431
Query: 330 IKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKINDEDDDT 388
I IRQ SG+ I +++ +DN +E ++T+T + + + A+ +L +++ + ++
Sbjct: 432 INEIRQLSGSVIKINEPQDNNNERLVTITGTQECNQM------ALYMLYSRLGESSKNS 484
>gi|417410200|gb|JAA51577.1| Putative polyc-binding alphacp-1, partial [Desmodus rotundus]
Length = 378
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 88/364 (24%), Positives = 171/364 (46%), Gaps = 45/364 (12%)
Query: 291 TGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNR 350
T L++ +G++ + L IR+L ++G +IGK G ++K +R+ SGA+I++ + N
Sbjct: 9 TLLNMDTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNC 66
Query: 351 DECVITVTAIESPDDIKSMAVEAVL-LLQTKINDEDDDT-------VTIRLLVSSKVIGC 402
E +IT+ P + A ++ L+ I+ ++ VT+RL+V + G
Sbjct: 67 PERIITLAG---PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGS 123
Query: 403 IIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRD 462
+IGK G I EIR+ T A V+++ P ++ + + + G S+ + + QI + + +
Sbjct: 124 LIGKGGCKIKEIRESTGAQVQVAGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLE 180
Query: 463 D---------ALKDRDGSRNPPV---GADHIYSSGT-GISMPPLLPSI--------PPVG 501
+ R + PV G YS+G+ S P PS+ PP+
Sbjct: 181 TLSQSPPKGVTIPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLE 240
Query: 502 PLGYD-QRADSGSGIGMLSSSSLY-GYGSLSMGDSPYGSMSSYSSKL---YGGL---PPP 553
Q A + L ++ + ++ G++ + + S S ++ + GL
Sbjct: 241 AYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQT 300
Query: 554 LTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAA 613
+ E+ +P + +G +IG+ G+ + IR++SGA I++++ DR I+G+ A
Sbjct: 301 TSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLA 360
Query: 614 ENLI 617
+ LI
Sbjct: 361 QYLI 364
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 86/378 (22%), Positives = 154/378 (40%), Gaps = 94/378 (24%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH 89
E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R++T
Sbjct: 19 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIIT---- 72
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAV-----ANATDNDKKRKEKEECQI 144
L +A+ K A I + + ++ T++ + ++
Sbjct: 73 ------------------LAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRL 114
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAV 204
+VP+SQ ++IGK G IK +R T ++V T + + I+G +++
Sbjct: 115 VVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNST-------ERAITIAGIPQSI 167
Query: 205 KKALFAISAIMYKFSPREDIPLETTVREAPPSIII-----PSDVPIYPPGGL-------- 251
+ + I +M LET + P + I PS P+ GG
Sbjct: 168 IECVKQICVVM----------LETLSQSPPKGVTIPYRPKPSSSPVIFAGGQDRYSTGSD 217
Query: 252 ---YPNADPIL--------PSRSVPSILGAARVPD-----LQGYADTGNTWPVY--STGL 293
+P+ P + P +I G +P L A + +P+ +TG
Sbjct: 218 SASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGF 277
Query: 294 SLV-----------SGLVGASQ--SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQ 340
S + +GL ++Q S EL I P + IG +IG+ G I IRQ SGAQ
Sbjct: 278 SGIESSSPEVKGYWAGLDASAQTTSHELTI----PNDLIGCIIGRQGAKINEIRQMSGAQ 333
Query: 341 IDVDDTKDNRDECVITVT 358
I + + + + +T+T
Sbjct: 334 IKIANPVEGSTDRQVTIT 351
>gi|348522861|ref|XP_003448942.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
[Oreochromis niloticus]
Length = 588
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 146/311 (46%), Gaps = 44/311 (14%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSM 369
+R+L P +G +IGK G TI++I + + ++ID+ K+N +T +PD +
Sbjct: 197 LRMLVPTQFVGAIIGKEGATIRNITKQTHSKIDI-HRKENAGAAEKPITIHSTPDGCSNA 255
Query: 370 AVEAVLLLQTK-INDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGD 428
+ ++Q + ++ + + + +++L + +G +IGK G + +I + T + IS
Sbjct: 256 CKTIMDIMQKEALDTKFTEEIPLKILAHNSFVGRLIGKEGRNLKKIEQETGTKITISPLQ 315
Query: 429 KPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSS---G 485
+ + + V G + + A +++ ++R+ D + A ++ S+ G
Sbjct: 316 DLTLYNP-ERTITVKGSIEACAKAEEEVMKKIRESYESD--------MAAMNLQSNLIPG 366
Query: 486 TGISMPPLLPSIPP-VGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSS 544
++ L P+ P +GP S SS+ +P G+ SS
Sbjct: 367 LNLNALGLFPTTAPGMGP----------------SMSSI----------TPPGAHGGSSS 400
Query: 545 KLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRG-DRVALI 603
+GG P T+ + +PA AVG +IGK G ++ + +GA+I+++ ++ R+ +I
Sbjct: 401 --FGGHPESETVHLFIPALAVGAIIGKQGQHIKQLSHFAGASIKIAPAEGMDAKQRMVII 458
Query: 604 SGTPEQKRAAE 614
G PE + A+
Sbjct: 459 VGPPEAQFKAQ 469
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 91/406 (22%), Positives = 167/406 (41%), Gaps = 70/406 (17%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKEDVEV 98
R+L P +G++IGK G I +I ++T +++ + GA ++ +TI+S
Sbjct: 198 RMLVPTQFVGAIIGKEGATIRNITKQTHSKIDIHRKENAGAAEKPITIHS---------T 248
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
D ++ C +++ A D K E+ +IL +S +IGK
Sbjct: 249 PDGCSNA---CKTIMDIMQKEAL-----------DTKFTEEIPLKILAHNSFVGRLIGKE 294
Query: 159 GATIKRLRSKTRTSIKVTP-KDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYK 217
G +K++ +T T I ++P +D + + + + G EA KA +M K
Sbjct: 295 GRNLKKIEQETGTKITISPLQDLT------LYNPERTITVKGSIEACAKAE---EEVMKK 345
Query: 218 FSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQ 277
+RE+ S + ++ GL NA + P+ + P +
Sbjct: 346 ------------IRESYESDMAAMNLQSNLIPGLNLNALGLFPT-TAPGM---------- 382
Query: 278 GYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQAS 337
G + + T P G S G E + + P +G +IGK G IK + +
Sbjct: 383 GPSMSSITPPGAHGGSSSFGG-----HPESETVHLFIPALAVGAIIGKQGQHIKQLSHFA 437
Query: 338 GAQIDVDDTK--DNRDECVITVTAIESPDDIKSMA-VEAVLLLQTKINDEDDDTVTIRLL 394
GA I + + D + VI V E+ K+ + L + +++ + +
Sbjct: 438 GASIKIAPAEGMDAKQRMVIIVGPPEA--QFKAQCRIFGKLKEENFFGPKEEVKLEAHIK 495
Query: 395 VSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELV 440
V + G +IGK G +NE++ T A+V + + P D ND+++
Sbjct: 496 VPAFAAGRVIGKGGKTVNELQNLTCAEVVVPRDQTP---DENDQVI 538
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 60/152 (39%), Gaps = 26/152 (17%)
Query: 32 GNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPG--AKDRVVTIYSH 89
G+ ES + P +G++IGK G+ I + A +K+ P G AK R+V I
Sbjct: 403 GHPESETVHLFIPALAVGAIIGKQGQHIKQLSHFAGASIKIA-PAEGMDAKQRMVII--- 458
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSS 149
+A K I + K + K E I VP+
Sbjct: 459 -------------------VGPPEAQFKAQCRIFGKLKEENFFGPKEEVKLEAHIKVPAF 499
Query: 150 QSANIIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+ +IGK G T+ L++ T + V P+D +
Sbjct: 500 AAGRVIGKGGKTVNELQNLTCAEV-VVPRDQT 530
>gi|392873506|gb|AFM85585.1| heterogeneous nuclear ribonucleoprotein K [Callorhinchus milii]
Length = 424
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 100/386 (25%), Positives = 152/386 (39%), Gaps = 82/386 (21%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTA-IESPDDIKS 368
+R+L G VIGKGG IKS+R A + V D+ E ++++ A IE+ DI S
Sbjct: 50 LRLLLQSKNAGAVIGKGGKNIKSLRTDYNASVSVPDSSG--PERILSINADIETIGDILS 107
Query: 369 MAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGD 428
V + Q + D +R+LV G IIG G I E+R+ T+ +++ +
Sbjct: 108 KIVPTLEEYQHYKGKDFD--CELRMLVHQSQAGSIIGVKGVKIKELRESTQTTIKLFQ-- 163
Query: 429 KPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSGTGI 488
C + D +V + G+ V + + I+ L + +K R +P D Y G G
Sbjct: 164 -ECCPHSTDRVVLLGGKPDRVVECIKIIMGLLSESPVKGRAQPYDPNF-YDETYDYG-GF 220
Query: 489 SM---------------------PP------LLPSIPPVGPLG----------YD----- 506
+M PP P PP GP+G YD
Sbjct: 221 TMMFDERGRRGMPFGPRGRGGPHPPSPGYERRGPMGPPRGPVGRPIPPPRRDAYDDMSPP 280
Query: 507 -----------QRADSGSGIGMLSSSSLYG-------YGSLSMGDSPYGSMS------SY 542
R G I G YG +G Y M
Sbjct: 281 PRRGPPPPLSRSRNARGGRIPPPPPPPPRGSDRDRGMYGRSRLGADRYDGMGISGYGGRG 340
Query: 543 SSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVAL 602
GG P +T +V +P + G +IGK G + IR SGA+I++ + DR+
Sbjct: 341 RYGDLGG--PVITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIIT 398
Query: 603 ISGTPEQKRAAENLIQ----AFIMAT 624
I+GT +Q + A+ L+Q +F M +
Sbjct: 399 ITGTQDQIQNAQYLLQNSCSSFFMTS 424
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 82/190 (43%), Gaps = 36/190 (18%)
Query: 28 KDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIY 87
K + N++ V R+L G+VIGK GK I S+R + A V V P +R+++I
Sbjct: 39 KRSRNNDQCVELRLLLQSKNAGAVIGKGGKNIKSLRTDYNASVSV--PDSSGPERILSIN 96
Query: 88 SHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQI--L 145
+ ++ D+ ++ V + + + +C++ L
Sbjct: 97 ADIETIGDI-------------------------LSKIVPTLEEYQHYKGKDFDCELRML 131
Query: 146 VPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVK 205
V SQ+ +IIG G IK LR T+T+IK+ C D VL+ G+ + V
Sbjct: 132 VHQSQAGSIIGVKGVKIKELRESTQTTIKLF-------QECCPHSTDRVVLLGGKPDRVV 184
Query: 206 KALFAISAIM 215
+ + I ++
Sbjct: 185 ECIKIIMGLL 194
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 33/50 (66%)
Query: 37 VIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTI 86
+ ++ P + GS+IGK G+ I IR E+ A +K+ +P G++DR++TI
Sbjct: 350 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITI 399
Score = 42.4 bits (98), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 6/72 (8%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
+ +V P + G +IGKGG IK IR SGA I +D+ + ++ +IT+T + D I+
Sbjct: 350 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQ--DQIQ 407
Query: 368 SMAVEAVLLLQT 379
+ A LLQ
Sbjct: 408 N----AQYLLQN 415
>gi|432881653|ref|XP_004073885.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein
3-B-like isoform 1 [Oryzias latipes]
Length = 585
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 144/312 (46%), Gaps = 46/312 (14%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSM 369
+RVL P +G +IGK G TI++I + + ++ID+ K+N +T +P+
Sbjct: 197 LRVLVPTQFVGAIIGKEGATIRNITKQTHSKIDI-HRKENAGAAEKPITIHSTPEGCSKA 255
Query: 370 AVEAVLLLQTK-INDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGD 428
+ ++Q + ++ + + + +++L + +G +IGK G + +I + T + IS
Sbjct: 256 CTTIMEIMQKEALDTKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTGTKITISPLQ 315
Query: 429 KPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSGTGI 488
+ + + V G + + A +++ ++R+ D + A ++ S+
Sbjct: 316 DLTLYNP-ERTITVKGSIEACSRAEEEVMKKVREAYESD--------MAAMNLQSN---- 362
Query: 489 SMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDS-----PYGSMSSYS 543
L+P + L++ L+ G+ MG S P G+ S
Sbjct: 363 ----LIPGL-------------------NLNALGLFPSGTPGMGPSMSNFPPSGAHGGCS 399
Query: 544 SKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRG-DRVAL 602
S +GG P T+ + +PA AVG +IGK G ++ + +GA+I+++ ++ R+ +
Sbjct: 400 S--FGGQPESETVHLFIPALAVGAIIGKQGQHIKQLSHFAGASIKIAPAEGMDAKQRMVI 457
Query: 603 ISGTPEQKRAAE 614
I G PE + A+
Sbjct: 458 IVGPPEAQFKAQ 469
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 93/407 (22%), Positives = 162/407 (39%), Gaps = 72/407 (17%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKD-KEDVE 97
R+L P +G++IGK G I +I ++T +++ + GA ++ +TI+S + +
Sbjct: 198 RVLVPTQFVGAIIGKEGATIRNITKQTHSKIDIHRKENAGAAEKPITIHSTPEGCSKACT 257
Query: 98 VDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGK 157
E KE L D K E+ +IL ++ +IGK
Sbjct: 258 TIMEIMQKEAL------------------------DTKFTEEIPLKILAHNNFVGRLIGK 293
Query: 158 AGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESE-AVKKALFAISAIMY 216
G +K++ T T I ++P + L + E VK ++ A S
Sbjct: 294 EGRNLKKIEQDTGTKITISP-------------LQDLTLYNPERTITVKGSIEACS---- 336
Query: 217 KFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDL 276
R + + VREA S + ++ GL NA + PS P + P +
Sbjct: 337 ----RAEEEVMKKVREAYESDMAAMNLQSNLIPGLNLNALGLFPS-GTPGM-----GPSM 386
Query: 277 QGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQA 336
+ +G S G Q E + + P +G +IGK G IK +
Sbjct: 387 SNFPPSGAHGGCSSFG----------GQPESETVHLFIPALAVGAIIGKQGQHIKQLSHF 436
Query: 337 SGAQIDVDDTK--DNRDECVITVTAIESPDDIKSMA-VEAVLLLQTKINDEDDDTVTIRL 393
+GA I + + D + VI V E+ K+ + L + +++ + +
Sbjct: 437 AGASIKIAPAEGMDAKQRMVIIVGPPEA--QFKAQCRIFGKLKEENFFGPKEEVKLEAHI 494
Query: 394 LVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELV 440
V S G +IGK G +NE++ T A+V + + P D ND+++
Sbjct: 495 KVPSFAAGRVIGKGGKTVNELQNLTCAEVVVPRDQTP---DENDQVI 538
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 59/152 (38%), Gaps = 26/152 (17%)
Query: 32 GNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPG--AKDRVVTIYSH 89
G ES + P +G++IGK G+ I + A +K+ P G AK R+V I
Sbjct: 403 GQPESETVHLFIPALAVGAIIGKQGQHIKQLSHFAGASIKIA-PAEGMDAKQRMVII--- 458
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSS 149
+A K I + K + K E I VPS
Sbjct: 459 -------------------VGPPEAQFKAQCRIFGKLKEENFFGPKEEVKLEAHIKVPSF 499
Query: 150 QSANIIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+ +IGK G T+ L++ T + V P+D +
Sbjct: 500 AAGRVIGKGGKTVNELQNLTCAEV-VVPRDQT 530
>gi|449445515|ref|XP_004140518.1| PREDICTED: poly(rC)-binding protein 2-like [Cucumis sativus]
gi|449529952|ref|XP_004171961.1| PREDICTED: poly(rC)-binding protein 2-like [Cucumis sativus]
Length = 276
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 108/229 (47%), Gaps = 19/229 (8%)
Query: 4 SGKRYRSQRDNDRDGKNQKRRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIR 63
+GKR R D+ + I+ + V++RI+ P IG VIGK G I +R
Sbjct: 38 TGKRRR--EDDLIVSNSDASDISAPKRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVR 95
Query: 64 QETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIA 123
+ET+A +K+ D ++RV+ I S KD E+ D A+ AL ++ A I
Sbjct: 96 EETKATIKIADAVARYEERVIIISS--KDNENSVTD-----------AEKALQQIAALIL 142
Query: 124 NAVANATDNDK---KRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDA 180
++ + K ++L+ SQ+ ++IG +G I++LR+ + SI + +
Sbjct: 143 KEDGSSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAPN- 201
Query: 181 SEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETT 229
P + A E D V ISG+ AV KAL I + PR+ I + T
Sbjct: 202 QLPLCASAHESDRVVQISGDILAVLKALEEIGNQLRVNPPRQVISVSPT 250
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 121/242 (50%), Gaps = 27/242 (11%)
Query: 240 PSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQGYADTG-----NTWPVYSTGLS 294
P D+P+YP P P+ S +P L + G+ TG + V ++ S
Sbjct: 3 PGDIPLYPS---MPAMAPLPVSMPLPGTLLVSE----PGHTVTGKRRREDDLIVSNSDAS 55
Query: 295 LVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECV 354
+S +++ +++ R++ P +IG+VIGK G I+ +R+ + A I + D +E V
Sbjct: 56 DISAPKRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERV 115
Query: 355 ITVTAIESPDDI----KSMAVEAVLLL--------QTKINDEDDDTVTIRLLVSSKVIGC 402
I +++ ++ + + K++ A L+L + K+ TIRLL++ G
Sbjct: 116 IIISSKDNENSVTDAEKALQQIAALILKEDGSSIEELKVGTGHVAANTIRLLIAGSQAGS 175
Query: 403 IIGKSGSIINEIRKRTKADVRISKGDK-PKCADAN--DELVEVVGEVGSVRDALVQIILR 459
+IG SG I ++R + A + I ++ P CA A+ D +V++ G++ +V AL +I +
Sbjct: 176 LIGASGQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDILAVLKALEEIGNQ 235
Query: 460 LR 461
LR
Sbjct: 236 LR 237
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 33/49 (67%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALIS 604
++VP+ +GKVIGK G + +R+ + ATI+++D+ + +RV +IS
Sbjct: 71 FRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIIS 119
>gi|198425067|ref|XP_002127946.1| PREDICTED: similar to insulin-like growth factor 2 mRNA binding
protein 1 [Ciona intestinalis]
Length = 601
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 148/327 (45%), Gaps = 50/327 (15%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
+L R+L P +G +IGKGG +I++I Q + A+IDV KDN +T +P+
Sbjct: 193 DLPTRMLVPSQYVGAIIGKGGDSIRAITQKTHARIDV-HRKDNPGATEKAITINGTPEAC 251
Query: 367 KSMAVEAVLLLQTKINDED-----------DDTVTIRLLVSSKVIGCIIGKSGSIINEIR 415
+ AV A+L + + DED DD + +++L + +IG +IGK G + I+
Sbjct: 252 GA-AVGAILDI---VRDEDRNARQAAGTWNDDDIPLKILAHNSLIGRLIGKEGRNLKAIQ 307
Query: 416 KRTKADVRISK--GDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRN 473
++ + + IS D +C + + + G+ +A V ++ +LR D ++
Sbjct: 308 EKVETKIAISNSMADMQQCNA--ERTIAIYGDNDRCAEAEVLLMEKLRSCYENDMMIAQQ 365
Query: 474 PPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGD 533
P H Y P I ++Q + G G + YG G
Sbjct: 366 QP----HQY------------PGI------NFNQLSMFGGLQGGYGHPGMREYGMNYQGQ 403
Query: 534 SPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEM---S 590
+ G Y+ + TL +PA +VG +IG GS++ NI +I+ A+I++
Sbjct: 404 NFRG--QGYNGDQRAQMSETCTL--YIPAESVGAMIGSKGSHIRNISRIANASIKIVPPE 459
Query: 591 DSKSSRGDRVALISGTPEQKRAAENLI 617
D + RV ++ G+PE + ++ I
Sbjct: 460 DGDDEKQRRVTIM-GSPEGQWKSQFCI 485
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 92/394 (23%), Positives = 156/394 (39%), Gaps = 58/394 (14%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDP-FPGAKDRVVTIYSHVKDKEDVEV 98
R+L P +G++IGK G I +I Q+T AR+ V PGA ++ +TI
Sbjct: 197 RMLVPSQYVGAIIGKGGDSIRAITQKTHARIDVHRKDNPGATEKAITI------------ 244
Query: 99 DDEFNDKEPLC-AAQDALLKV----HAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
N C AA A+L + A D+D K IL +S
Sbjct: 245 ----NGTPEACGAAVGAILDIVRDEDRNARQAAGTWNDDDIPLK------ILAHNSLIGR 294
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISA 213
+IGK G +K ++ K T I ++ A C E + I G+++ +A
Sbjct: 295 LIGKEGRNLKAIQEKVETKIAISNSMAD--MQQCNAE--RTIAIYGDNDRCAEA------ 344
Query: 214 IMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARV 273
E + +E ++I P PG + + G
Sbjct: 345 --------EVLLMEKLRSCYENDMMIAQQQPHQYPGINFNQLS------MFGGLQGGYGH 390
Query: 274 PDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSI 333
P ++ Y G + G A SE + + P +G +IG G I++I
Sbjct: 391 PGMREYGMNYQGQNFRGQGYN---GDQRAQMSETCTLYI--PAESVGAMIGSKGSHIRNI 445
Query: 334 RQASGAQIDVDDTKDNRDECVITVTAIESPD-DIKSMAVEAVLLLQTKINDEDDDTVTIR 392
+ + A I + +D DE VT + SP+ KS L Q + +D+ +T
Sbjct: 446 SRIANASIKIVPPEDGDDEKQRRVTIMGSPEGQWKSQFCIFDKLKQEGFFNAEDERLTSE 505
Query: 393 LLVSSKVIGCIIGKSGSIINEIRKRTKADVRISK 426
+ + + ++G +IGK G+ + E+++ T ++V I +
Sbjct: 506 MTIPAAIVGRVIGKGGNNVRELQRLTSSEVVIPR 539
>gi|195128219|ref|XP_002008562.1| GI13561 [Drosophila mojavensis]
gi|193920171|gb|EDW19038.1| GI13561 [Drosophila mojavensis]
Length = 362
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 141/346 (40%), Gaps = 59/346 (17%)
Query: 305 SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT----AI 360
S L IR++ ++G +IGK G + R+ SGA+I++ D + E ++TV+ AI
Sbjct: 21 SVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISD--GSCPERIVTVSGTTNAI 78
Query: 361 ESPDDIKSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKA 420
S + + E + + IRL+V + G +IGKSGS I EIR+ T
Sbjct: 79 FSAFTLITKKFEEWCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGC 138
Query: 421 DVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADH 480
++++ P ++ + V + G + + QI L + + +PP GA
Sbjct: 139 SIQVASEMLP---NSTERAVTLSGSAEQITQCIYQICLVMLE----------SPPRGATI 185
Query: 481 IYSSGTGISMPPLL----------------------PSIPPVGPLGYDQRADSGSGIGML 518
Y ++ P +L P S GI
Sbjct: 186 PYRPKPQVTGPVILANGQAFTIQGNYAVPTQEVAKNPLASLAALGLAGMTPASTGGINHT 245
Query: 519 SSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLAN 578
+ ++L G L ++ + E+ V + +G +IGK G+ +A
Sbjct: 246 ALAALAG-SQLRTANANRAQQQQH--------------EMTVSNDLIGCIIGKGGTKIAE 290
Query: 579 IRKISGATIEMSDSKSSRG---DRVALISGTPEQKRAAENLIQAFI 621
IR+ISGA I +S+ + G DR ISG P+ A+ LI I
Sbjct: 291 IRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQYLINMRI 336
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 147/340 (43%), Gaps = 46/340 (13%)
Query: 36 SVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKED 95
++ R++ +GS+IGK G+++N R+E+ A++ + D +R+VT+
Sbjct: 23 TLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDG--SCPERIVTVSGTTN---- 76
Query: 96 VEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANII 155
A A + + D K K + +++VP+SQ ++I
Sbjct: 77 --------------AIFSAFTLITKKFEEWCSQFNDVGKVGKTQIPIRLIVPASQCGSLI 122
Query: 156 GKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIM 215
GK+G+ IK +R T SI+V + T + V +SG +E + + ++ I +M
Sbjct: 123 GKSGSKIKEIRQTTGCSIQVASEMLPNST-------ERAVTLSGSAEQITQCIYQICLVM 175
Query: 216 YKFSPR-EDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVP 274
+ PR IP + P I+ ++ + G Y A P P AA
Sbjct: 176 LESPPRGATIPYRPKPQVTGPVIL--ANGQAFTIQGNY--AVPTQEVAKNPLASLAALGL 231
Query: 275 DLQGYADTGNTWPVYSTGLSLVSG----LVGASQSEELVIRVLCPFNKIGRVIGKGGGTI 330
A TG + T L+ ++G A+++++ + + IG +IGKGG I
Sbjct: 232 AGMTPASTGG---INHTALAALAGSQLRTANANRAQQQQHEMTVSNDLIGCIIGKGGTKI 288
Query: 331 KSIRQASGAQIDVDDTKD----NRDECVITVTAIESPDDI 366
IRQ SGA I + + ++ N D T+T +PD +
Sbjct: 289 AEIRQISGAMIRISNCEEREGGNTDR---TITISGNPDSV 325
>gi|363747267|ref|XP_423701.3| PREDICTED: poly(rC)-binding protein 2-like isoform 4 [Gallus
gallus]
Length = 307
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 154/332 (46%), Gaps = 41/332 (12%)
Query: 297 SGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVIT 356
+G++ + L IR+L ++G +IGK G ++K +R+ SGA+I++ + N E +IT
Sbjct: 3 TGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIIT 60
Query: 357 VTAIESPDDIKSMAVEAVL-LLQTKINDEDDDT-------VTIRLLVSSKVIGCIIGKSG 408
+ P + A ++ L+ I+ ++ VT+RL+V + G +IGK G
Sbjct: 61 LAG---PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGG 117
Query: 409 SIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDR 468
I EIR+ T A V+++ P ++ + + + G S+ + + QI + + +
Sbjct: 118 CKIKEIRESTGAQVQVAGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLE------ 168
Query: 469 DGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGS 528
+PP G Y PS PV + +A + G + L
Sbjct: 169 ----SPPKGVTIPYRPK---------PSSSPV--IFAGGQAYTIQGQYAIPQPDLTKLHQ 213
Query: 529 LSMGDSPYGSMSSYSSKLYGGL---PPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGA 585
L+M S + MS ++ GL + E+ +P + +G +IG+ G+ + IR++SGA
Sbjct: 214 LAMQQSHF-PMSHGNTGFSAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGA 272
Query: 586 TIEMSDSKSSRGDRVALISGTPEQKRAAENLI 617
I++++ DR I+G+ A+ LI
Sbjct: 273 QIKIANPVEGSTDRQVTITGSAASISLAQYLI 304
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 144/339 (42%), Gaps = 64/339 (18%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH 89
E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R++T
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIIT---- 60
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAV-----ANATDNDKKRKEKEECQI 144
L +A+ K A I + + ++ T++ + ++
Sbjct: 61 ------------------LAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRL 102
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAV 204
+VP+SQ ++IGK G IK +R T ++V T + + I+G +++
Sbjct: 103 VVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNST-------ERAITIAGIPQSI 155
Query: 205 KKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSV 264
+ + I +M + P+ T+ P PS P+ GG A I ++
Sbjct: 156 IECVKQICVVMLESPPK-----GVTIPYRPK----PSSSPVIFAGG---QAYTIQGQYAI 203
Query: 265 PSILGAARVPD---LQGYADTGNTWPVYSTGLSLVSGLVGASQ--SEELVIRVLCPFNKI 319
P PD L A + +P+ +GL ++Q S EL I P + I
Sbjct: 204 PQ-------PDLTKLHQLAMQQSHFPMSHGNTGFSAGLDASAQTTSHELTI----PNDLI 252
Query: 320 GRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
G +IG+ G I IRQ SGAQI + + + + +T+T
Sbjct: 253 GCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTIT 291
>gi|354490191|ref|XP_003507243.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Cricetulus
griseus]
gi|344239259|gb|EGV95362.1| Poly(rC)-binding protein 2 [Cricetulus griseus]
Length = 362
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 166/354 (46%), Gaps = 41/354 (11%)
Query: 297 SGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVIT 356
+G++ + L IR+L ++G +IGK G ++K +R+ SGA+I++ + N E +IT
Sbjct: 3 TGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIIT 60
Query: 357 VTAIESPDDIKSMAVEAVL-LLQTKINDEDDDT-------VTIRLLVSSKVIGCIIGKSG 408
+ P + A ++ L+ I+ ++ VT+RL+V + G +IGK G
Sbjct: 61 LAG---PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGG 117
Query: 409 SIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKD- 467
I EIR+ T A V+++ P ++ + + + G S+ + + QI + + + K
Sbjct: 118 CKIKEIRESTGAQVQVAGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLESPPKGV 174
Query: 468 ----RDGSRNPPV---GADHIYSSGT-GISMPPLLPSI--------PPVGPLGYD-QRAD 510
R + PV G YS+G+ S P PS+ PP+ Q A
Sbjct: 175 TIPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAI 234
Query: 511 SGSGIGMLSSSSLY-GYGSLSMGDSPYGSMSSYSSKL---YGGL---PPPLTLEVLVPAN 563
+ L ++ + ++ G++ + + S S ++ + GL + E+ +P +
Sbjct: 235 PQPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPND 294
Query: 564 AVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLI 617
+G +IG+ G+ + IR++SGA I+ ++ DR I+G+ A+ LI
Sbjct: 295 LIGCIIGRQGAKINEIRQMSGAQIKTANPVEGSTDRQVTITGSAASISLAQYLI 348
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 84/373 (22%), Positives = 152/373 (40%), Gaps = 88/373 (23%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH 89
E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R++T
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIIT---- 60
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAV-----ANATDNDKKRKEKEECQI 144
L +A+ K A I + + ++ T++ + ++
Sbjct: 61 ------------------LAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRL 102
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAV 204
+VP+SQ ++IGK G IK +R T ++V T + + I+G +++
Sbjct: 103 VVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNST-------ERAITIAGIPQSI 155
Query: 205 KKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGL-----------YP 253
+ + I +M + P+ T+ P PS P+ GG +P
Sbjct: 156 IECVKQICVVMLESPPK-----GVTIPYRPK----PSSSPVIFAGGQDRYSTGSDSASFP 206
Query: 254 NADPIL--------PSRSVPSILGAARVPD-----LQGYADTGNTWPVY--STGLSLV-- 296
+ P + P +I G +P L A + +P+ +TG S +
Sbjct: 207 HTTPSMCLNPDLEGPPLEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSGIES 266
Query: 297 ---------SGLVGASQ--SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDD 345
+GL ++Q S EL I P + IG +IG+ G I IRQ SGAQI +
Sbjct: 267 SSPEVKGYWAGLDASAQTTSHELTI----PNDLIGCIIGRQGAKINEIRQMSGAQIKTAN 322
Query: 346 TKDNRDECVITVT 358
+ + +T+T
Sbjct: 323 PVEGSTDRQVTIT 335
>gi|302816563|ref|XP_002989960.1| hypothetical protein SELMODRAFT_428421 [Selaginella moellendorffii]
gi|300142271|gb|EFJ08973.1| hypothetical protein SELMODRAFT_428421 [Selaginella moellendorffii]
Length = 393
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 146/342 (42%), Gaps = 68/342 (19%)
Query: 309 VIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKS 368
V R++ P +K+G +IG+ G +K + + + ++I + D E ++ V+A E P+ S
Sbjct: 50 VFRLIVPLHKVGAIIGRKGEFVKRMCEETRSRIKILDGVPGTLERIVLVSAKEDPEATIS 109
Query: 369 MAVEAVLLLQTKINDEDDD-------------TVTIRLLVSSKVIGCIIGKSGSIINEIR 415
A++ +L + ++ + V RLLV++ G +IG+
Sbjct: 110 PAMDGLLRVHRRVTEGSSGDGEPVEHIILPSGLVQSRLLVTATQAGSLIGR--------- 160
Query: 416 KRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPP 475
+ + P CA A+D +VEV GE+ V+ A+ ++ LR L DR +
Sbjct: 161 ----------QEELPLCALADDRMVEVQGEILKVQKAMELVVSHLRK-FLVDRSVLQLFE 209
Query: 476 VGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMG-DS 534
S G + G QRA S G +++ + + ++ +
Sbjct: 210 FNVSFAGSRSIGYKVHN-----------GELQRAMSSQVQGQQAAAIATSWATPTVAATT 258
Query: 535 PYGSMSSYSSK---------LYGGLP-----------PP---LTLEVLVPANAVGKVIGK 571
PY S Y+ + +YGG P PP ++ ++ VP +IG
Sbjct: 259 PYSSTDYYADQAQSQHYAVSMYGGDPGRVDVTSTTPAPPAESVSQQLQVPLLYADAIIGT 318
Query: 572 AGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAA 613
AG+N+ +R+ SGATI + ++ ++ G+ + G Q + A
Sbjct: 319 AGANINYMRRTSGATISIQETPNAPGEMTIEVHGQSTQVQTA 360
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 91/208 (43%), Gaps = 46/208 (22%)
Query: 18 GKNQKRRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFP 77
G ++ E+ G ++R++ P +G++IG+ G+ + + +ETR+R+K++D P
Sbjct: 30 GSQEETPPGERKWPGWPGDNVFRLIVPLHKVGAIIGRKGEFVKRMCEETRSRIKILDGVP 89
Query: 78 GAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRK 137
G +R+V V KED E + A D LL+VH V + D +
Sbjct: 90 GTLERIVL----VSAKEDPEAT--------ISPAMDGLLRVH----RRVTEGSSGDGEPV 133
Query: 138 EK-------EECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAME 190
E + ++LV ++Q+ ++IG+ E CA+
Sbjct: 134 EHIILPSGLVQSRLLVTATQAGSLIGR-----------------------QEELPLCALA 170
Query: 191 FDNFVLISGESEAVKKALFAISAIMYKF 218
D V + GE V+KA+ + + + KF
Sbjct: 171 DDRMVEVQGEILKVQKAMELVVSHLRKF 198
>gi|61557337|ref|NP_001013241.1| poly(rC)-binding protein 2 [Rattus norvegicus]
gi|193083108|ref|NP_001122383.1| poly(rC)-binding protein 2 isoform d [Homo sapiens]
gi|6707736|sp|Q15366.1|PCBP2_HUMAN RecName: Full=Poly(rC)-binding protein 2; AltName: Full=Alpha-CP2;
AltName: Full=Heterogeneous nuclear ribonucleoprotein
E2; Short=hnRNP E2
gi|460773|emb|CAA55015.1| hnRNP-E2 [Homo sapiens]
gi|50926841|gb|AAH78906.1| Poly(rC) binding protein 2 [Rattus norvegicus]
gi|119617116|gb|EAW96710.1| poly(rC) binding protein 2, isoform CRA_e [Homo sapiens]
Length = 365
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 167/357 (46%), Gaps = 44/357 (12%)
Query: 297 SGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVIT 356
+G++ + L IR+L ++G +IGK G ++K +R+ SGA+I++ + N E +IT
Sbjct: 3 TGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIIT 60
Query: 357 VTAIESPDDIKSMAVEAVL-LLQTKINDEDDDT-------VTIRLLVSSKVIGCIIGKSG 408
+ P + A ++ L+ I+ ++ VT+RL+V + G +IGK G
Sbjct: 61 LAG---PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGG 117
Query: 409 SIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDD----- 463
I EIR+ T A V+++ P ++ + + + G S+ + + QI + + +
Sbjct: 118 CKIKEIRESTGAQVQVAGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLETLSQSP 174
Query: 464 ----ALKDRDGSRNPPV---GADHIYSSGT-GISMPPLLPSI--------PPVGPLGYD- 506
+ R + PV G YS+G+ S P PS+ PP+
Sbjct: 175 PKGVTIPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQG 234
Query: 507 QRADSGSGIGMLSSSSLY-GYGSLSMGDSPYGSMSSYSSKL--YGGL---PPPLTLEVLV 560
Q A + L ++ + ++ G++ + + S S ++ Y GL + E+ +
Sbjct: 235 QYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWGLDASAQTTSHELTI 294
Query: 561 PANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLI 617
P + +G +IG+ G+ + IR++SGA I++++ DR I+G+ A+ LI
Sbjct: 295 PNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLI 351
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 86/378 (22%), Positives = 153/378 (40%), Gaps = 93/378 (24%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH 89
E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R++T
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIIT---- 60
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAV-----ANATDNDKKRKEKEECQI 144
L +A+ K A I + + ++ T++ + ++
Sbjct: 61 ------------------LAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRL 102
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAV 204
+VP+SQ ++IGK G IK +R T ++V T + + I+G +++
Sbjct: 103 VVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNST-------ERAITIAGIPQSI 155
Query: 205 KKALFAISAIMYKFSPREDIPLETTVREAPPSIII-----PSDVPIYPPGGL-------- 251
+ + I +M LET + P + I PS P+ GG
Sbjct: 156 IECVKQICVVM----------LETLSQSPPKGVTIPYRPKPSSSPVIFAGGQDRYSTGSD 205
Query: 252 ---YPNADPIL--------PSRSVPSILGAARVPD-----LQGYADTGNTWPVY--STGL 293
+P+ P + P +I G +P L A + +P+ +TG
Sbjct: 206 SASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGF 265
Query: 294 SLVS----------GLVGASQ--SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQI 341
S + GL ++Q S EL I P + IG +IG+ G I IRQ SGAQI
Sbjct: 266 SGIESSSPEVKGYWGLDASAQTTSHELTI----PNDLIGCIIGRQGAKINEIRQMSGAQI 321
Query: 342 DVDDTKDNRDECVITVTA 359
+ + + + +T+T
Sbjct: 322 KIANPVEGSTDRQVTITG 339
>gi|79550843|ref|NP_178410.2| putative RNA-binding protein [Arabidopsis thaliana]
gi|45752620|gb|AAS76208.1| At2g03110 [Arabidopsis thaliana]
gi|46359791|gb|AAS88759.1| At2g03110 [Arabidopsis thaliana]
gi|330250570|gb|AEC05664.1| putative RNA-binding protein [Arabidopsis thaliana]
Length = 153
Score = 74.3 bits (181), Expect = 2e-10, Method: Composition-based stats.
Identities = 51/158 (32%), Positives = 85/158 (53%), Gaps = 12/158 (7%)
Query: 70 VKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANA 129
++V + PG +RVVTIYS+ +++ +E D+E + +C A DAL KVH + +
Sbjct: 1 MRVNEALPGCDERVVTIYSNSEERNRIEDDNE----DFVCPAFDALFKVHDMVVVEEFDD 56
Query: 130 TDNDKKRKEKEECQ------ILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEP 183
D+ E E Q +LVPS Q +IGK G I+ LR+ T I+V ++ + P
Sbjct: 57 DDDYNDNDEYSEGQTVVTVRMLVPSDQIGYLIGKGGPIIQTLRNDTNAQIRV--RNDNLP 114
Query: 184 THSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPR 221
+ A+ D + I G+ AV++AL+ ++ ++Y R
Sbjct: 115 MCALALSHDELLQIIGDPSAVREALYQVAFLLYNNPSR 152
Score = 63.2 bits (152), Expect = 4e-07, Method: Composition-based stats.
Identities = 33/82 (40%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
Query: 384 EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADA--NDELVE 441
E VT+R+LV S IG +IGK G II +R T A +R+ + P CA A +DEL++
Sbjct: 68 EGQTVVTVRMLVPSDQIGYLIGKGGPIIQTLRNDTNAQIRVRNDNLPMCALALSHDELLQ 127
Query: 442 VVGEVGSVRDALVQIILRLRDD 463
++G+ +VR+AL Q+ L ++
Sbjct: 128 IIGDPSAVREALYQVAFLLYNN 149
>gi|326469510|gb|EGD93519.1| KH domain RNA binding protein [Trichophyton tonsurans CBS 112818]
gi|326478964|gb|EGE02974.1| KH domain RNA binding protein [Trichophyton equinum CBS 127.97]
Length = 483
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 156/360 (43%), Gaps = 66/360 (18%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSM 369
IR + + VIGKGG + IR+ SGA+ V D E ++TV+ ++
Sbjct: 133 IRAVISSAEAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSGMQD------A 186
Query: 370 AVEAVLLLQTKINDE--------DDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKAD 421
+A L+ +N+E T +RLL+ +IG IIGKSG I EI++ + A
Sbjct: 187 VAKAFGLIIRTLNNEPLEAPSTAQSKTYPLRLLIPHILIGSIIGKSGVRIREIQEASGA- 245
Query: 422 VRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHI 481
R++ D LV ++G +V A + + L + L +R G P + +
Sbjct: 246 -RLNASDSCLPLSTERSLV-ILGVADAVHIATYYVAVTLVEQ-LTERFGG---PAASAYA 299
Query: 482 YSSGTG-------ISMPPLLPSIPPVGPLGY-----------DQRADSGSGIGMLSSSSL 523
SG + + P +P P G G+ ++ A G G+ + +
Sbjct: 300 TRSGGPAGVVPGGMQVVPYVPQ-PAGGQYGHPDSLRRNNPQANRAAPGGYGVPYMQQPAP 358
Query: 524 YGYG---SLSMGDSP---YGSMSSYSSKLYGG--------LPP------------PLTLE 557
+ + SL G SP Y + YG +PP PLT +
Sbjct: 359 HPHAPQPSLHYGASPRTGYTGAGPHQPAPYGAPQPPHGGHVPPNGPPMGAAVPGQPLTQQ 418
Query: 558 VLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLI 617
+ +P + VG +IGK G+ + IR +SG+ I++++ + + +R+ I+GT E + A ++
Sbjct: 419 IYIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQDNSNERLVTITGTQECNQMALYML 478
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 35/56 (62%)
Query: 306 EELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIE 361
+ L ++ P + +G +IGKGG I IR SG+ I +++ +DN +E ++T+T +
Sbjct: 413 QPLTQQIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQDNSNERLVTITGTQ 468
Score = 38.9 bits (89), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 303 SQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDT 346
+QS+ +R+L P IG +IGK G I+ I++ASGA+++ D+
Sbjct: 209 AQSKTYPLRLLIPHILIGSIIGKSGVRIREIQEASGARLNASDS 252
Score = 38.9 bits (89), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 33/52 (63%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTI 86
+ + +I P+ ++G++IGK G IN IR + + +K+ +P + +R+VTI
Sbjct: 413 QPLTQQIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQDNSNERLVTI 464
>gi|302509454|ref|XP_003016687.1| hypothetical protein ARB_04979 [Arthroderma benhamiae CBS 112371]
gi|327303250|ref|XP_003236317.1| KH domain RNA binding protein [Trichophyton rubrum CBS 118892]
gi|291180257|gb|EFE36042.1| hypothetical protein ARB_04979 [Arthroderma benhamiae CBS 112371]
gi|326461659|gb|EGD87112.1| KH domain RNA binding protein [Trichophyton rubrum CBS 118892]
Length = 483
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 156/360 (43%), Gaps = 66/360 (18%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSM 369
IR + + VIGKGG + IR+ SGA+ V D E ++TV+ ++
Sbjct: 133 IRAVISSAEAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSGMQD------A 186
Query: 370 AVEAVLLLQTKINDE--------DDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKAD 421
+A L+ +N+E T +RLL+ +IG IIGKSG I EI++ + A
Sbjct: 187 VAKAFGLIIRTLNNEPLEAPSTAQSKTYPLRLLIPHILIGSIIGKSGVRIREIQEASGA- 245
Query: 422 VRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHI 481
R++ D LV ++G +V A + + L + L +R G P + +
Sbjct: 246 -RLNASDSCLPLSTERSLV-ILGVADAVHIATYYVAVTLVEQ-LTERFGG---PAASAYA 299
Query: 482 YSSGTG-------ISMPPLLPSIPPVGPLGY-----------DQRADSGSGIGMLSSSSL 523
SG + + P +P P G G+ ++ A G G+ + +
Sbjct: 300 TRSGGPAGVVPGGMQVVPYVPQ-PAGGQYGHPDSLRRNNPQANRAAPGGYGVPYMQQPAP 358
Query: 524 YGYG---SLSMGDSP---YGSMSSYSSKLYGG--------LPP------------PLTLE 557
+ + SL G SP Y + YG +PP PLT +
Sbjct: 359 HPHAPQPSLHYGASPRTGYTGAGPHQPAPYGAPQPPHGGHVPPNGPPMGAAVPGQPLTQQ 418
Query: 558 VLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLI 617
+ +P + VG +IGK G+ + IR +SG+ I++++ + + +R+ I+GT E + A ++
Sbjct: 419 IYIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQDNSNERLVTITGTQECNQMALYML 478
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 35/56 (62%)
Query: 306 EELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIE 361
+ L ++ P + +G +IGKGG I IR SG+ I +++ +DN +E ++T+T +
Sbjct: 413 QPLTQQIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQDNSNERLVTITGTQ 468
Score = 38.9 bits (89), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 303 SQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDT 346
+QS+ +R+L P IG +IGK G I+ I++ASGA+++ D+
Sbjct: 209 AQSKTYPLRLLIPHILIGSIIGKSGVRIREIQEASGARLNASDS 252
Score = 38.9 bits (89), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 33/52 (63%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTI 86
+ + +I P+ ++G++IGK G IN IR + + +K+ +P + +R+VTI
Sbjct: 413 QPLTQQIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQDNSNERLVTI 464
>gi|363747265|ref|XP_003643961.1| PREDICTED: poly(rC)-binding protein 2-like isoform 3 [Gallus
gallus]
Length = 320
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 157/336 (46%), Gaps = 36/336 (10%)
Query: 297 SGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVIT 356
+G++ + L IR+L ++G +IGK G ++K +R+ SGA+I++ + N E +IT
Sbjct: 3 TGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIIT 60
Query: 357 VTAIESPDDIKSMAVEAVL-LLQTKINDEDDDT-------VTIRLLVSSKVIGCIIGKSG 408
+ P + A ++ L+ I+ ++ VT+RL+V + G +IGK G
Sbjct: 61 LAG---PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGG 117
Query: 409 SIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDR 468
I EIR+ T A V+++ P ++ + + + G S+ + + QI + + + K
Sbjct: 118 CKIKEIRESTGAQVQVAGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLESPPKGV 174
Query: 469 DGSRNP-PVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYG 527
P P + I++ G ++ +IP Q A S M
Sbjct: 175 TIPYRPKPSSSPVIFAGGQAYTIQGQY-AIPQPDLTKLHQLAMQQSHFPM---------- 223
Query: 528 SLSMGDSPYGSMSSYSSKL---YGGL---PPPLTLEVLVPANAVGKVIGKAGSNLANIRK 581
S G++ + + S S ++ + GL + E+ +P + +G +IG+ G+ + IR+
Sbjct: 224 --SHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQ 281
Query: 582 ISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLI 617
+SGA I++++ DR I+G+ A+ LI
Sbjct: 282 MSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLI 317
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 149/352 (42%), Gaps = 77/352 (21%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH 89
E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R++T
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIIT---- 60
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAV-----ANATDNDKKRKEKEECQI 144
L +A+ K A I + + ++ T++ + ++
Sbjct: 61 ------------------LAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRL 102
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAV 204
+VP+SQ ++IGK G IK +R T ++V T + + I+G +++
Sbjct: 103 VVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNST-------ERAITIAGIPQSI 155
Query: 205 KKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSV 264
+ + I +M + P+ T+ P PS P+ GG A I ++
Sbjct: 156 IECVKQICVVMLESPPK-----GVTIPYRPK----PSSSPVIFAGG---QAYTIQGQYAI 203
Query: 265 PSILGAARVPD---LQGYADTGNTWPVY--STGLSLV-----------SGLVGASQ--SE 306
P PD L A + +P+ +TG S + +GL ++Q S
Sbjct: 204 PQ-------PDLTKLHQLAMQQSHFPMSHGNTGFSGIESSSPEVKGYWAGLDASAQTTSH 256
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
EL I P + IG +IG+ G I IRQ SGAQI + + + + +T+T
Sbjct: 257 ELTI----PNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTIT 304
>gi|194881635|ref|XP_001974928.1| GG22043 [Drosophila erecta]
gi|190658115|gb|EDV55328.1| GG22043 [Drosophila erecta]
Length = 498
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 88/177 (49%), Gaps = 12/177 (6%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
E +R+L P + G VIGKGG I+ +R A + VDD++ E I ++A DI
Sbjct: 22 EETVRILIPSSIAGAVIGKGGQHIQKMRTQYKATVSVDDSQG--PERTIQISA-----DI 74
Query: 367 KSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISK 426
+S ++ K +E D+ +RLL+ + GC+IGK G I EIR R R K
Sbjct: 75 ESTL--EIITEMLKYFEERDEDFDVRLLIHQSLAGCVIGKGGQKIKEIRDRIGC--RFLK 130
Query: 427 GDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYS 483
+ D +V+ VG+ V DA+ ++I RD +K + + P+ D +Y+
Sbjct: 131 VFSNVAPQSTDRVVQTVGKQSQVIDAVREVITLTRDTPIKGAIHNYD-PMNFDRVYA 186
Score = 42.7 bits (99), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 33/143 (23%)
Query: 26 NEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVT 85
++K + NEE+V RIL P + G+VIGK G+ I +R + +A V V D +R +
Sbjct: 14 DQKRNRRNEETV--RILIPSSIAGAVIGKGGQHIQKMRTQYKATVSVDD--SQGPERTIQ 69
Query: 86 IYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQIL 145
I + ++ ++ + +LK ++R E + ++L
Sbjct: 70 ISADIESTLEIITE---------------MLKYF--------------EERDEDFDVRLL 100
Query: 146 VPSSQSANIIGKAGATIKRLRSK 168
+ S + +IGK G IK +R +
Sbjct: 101 IHQSLAGCVIGKGGQKIKEIRDR 123
Score = 39.3 bits (90), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 53/110 (48%), Gaps = 14/110 (12%)
Query: 131 DNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAME 190
D + R+ +E +IL+PSS + +IGK G I+++R++ + ++ V D+ P + +
Sbjct: 14 DQKRNRRNEETVRILIPSSIAGAVIGKGGQHIQKMRTQYKATVSV--DDSQGPERTIQIS 71
Query: 191 FDNFVLISGESEAVKKALFAISAIMYKFSPR-EDIPLETTVREAPPSIII 239
D ++ L I+ ++ F R ED + + ++ +I
Sbjct: 72 AD-----------IESTLEIITEMLKYFEERDEDFDVRLLIHQSLAGCVI 110
>gi|348517827|ref|XP_003446434.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Oreochromis niloticus]
Length = 601
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 150/324 (46%), Gaps = 42/324 (12%)
Query: 297 SGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVIT 356
SG+ ++ +R+L P +G +IGK G TI++I + + ++IDV K+N
Sbjct: 189 SGMPSKPPHADIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDV-HRKENAGAAEKP 247
Query: 357 VTAIESPDDIKSMAVEAVL--LLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEI 414
++ +P+ S A +L + Q + + D V ++++ + +G +IGK G + +I
Sbjct: 248 ISIHSTPEGC-SAACRMILDIMHQEAKDTKTADEVPLKIMAHNNFVGRLIGKEGRNLKKI 306
Query: 415 RKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNP 474
+ T + IS + + + V G + + A V+I+ ++R +A ++ + N
Sbjct: 307 EQDTDTKITISPLQDLTLYNP-ERTITVKGSIEACCQAEVEIMKKVR-EAYENDIAAMN- 363
Query: 475 PVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDS 534
L+P + +G L G+ SS+ ++G +
Sbjct: 364 --------------QQTHLIPGL-NLGAL----------GLFPSSSNMPPPPPGNAVGGT 398
Query: 535 PYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS 594
PYG G P T+ V +PA AVG +IGK G ++ + + +GA+I+++ ++S
Sbjct: 399 PYGCF---------GAPEQETVHVYIPAQAVGAIIGKKGQHIKQLSRFAGASIKIAPAES 449
Query: 595 SRGD-RVALISGTPEQKRAAENLI 617
R+ +++G PE + A+ I
Sbjct: 450 PDSKMRMVIVTGPPEAQFKAQGRI 473
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 80/170 (47%), Gaps = 18/170 (10%)
Query: 298 GLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVD--DTKDNRDECVI 355
G GA + E + V P +G +IGK G IK + + +GA I + ++ D++ VI
Sbjct: 401 GCFGAPEQE--TVHVYIPAQAVGAIIGKKGQHIKQLSRFAGASIKIAPAESPDSKMRMVI 458
Query: 356 TVTAIESPDDIKSMA-VEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEI 414
E+ K+ + L + +++ + + +++ G +IGK G +NE+
Sbjct: 459 VTGPPEA--QFKAQGRIYGKLKEENFFGPKEEVKLETHIKMAAAAAGRVIGKGGKTVNEL 516
Query: 415 RKRTKADVRISKGDKPKCADANDE-LVEVVGEVGS-------VRDALVQI 456
+ T A+V + + P D ND+ +V++ G + +RD L Q+
Sbjct: 517 QNLTAAEVVVPREQTP---DENDQVIVKINGHFYASQLAQRKIRDILTQV 563
Score = 46.2 bits (108), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 94/235 (40%), Gaps = 38/235 (16%)
Query: 28 KDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAK----DRV 83
KD K +E V +I+ + +G +IGK G+ + I Q+T ++ + P +R
Sbjct: 273 KDTKTADE-VPLKIMAHNNFVGRLIGKEGRNLKKIEQDTDTKI-TISPLQDLTLYNPERT 330
Query: 84 VTIYSHVKDKEDVEVD------DEFNDKEPLCAAQDALL----------------KVHAA 121
+T+ ++ EV+ + + + Q L+
Sbjct: 331 ITVKGSIEACCQAEVEIMKKVREAYENDIAAMNQQTHLIPGLNLGALGLFPSSSNMPPPP 390
Query: 122 IANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDAS 181
NAV E+E + +P+ IIGK G IK+L SIK+ P A
Sbjct: 391 PGNAVGGTPYGCFGAPEQETVHVYIPAQAVGAIIGKKGQHIKQLSRFAGASIKIAP--AE 448
Query: 182 EPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYK---FSPREDIPLETTVREA 233
P M V+++G EA KA I + + F P+E++ LET ++ A
Sbjct: 449 SPDSKMRM-----VIVTGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIKMA 498
>gi|195377361|ref|XP_002047459.1| GJ11921 [Drosophila virilis]
gi|194154617|gb|EDW69801.1| GJ11921 [Drosophila virilis]
Length = 589
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 138/339 (40%), Gaps = 59/339 (17%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT----AIESP 363
L IR++ ++G +IGK G + R+ SGA+I++ D + E ++TV+ AI S
Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISD--GSCPERIVTVSGTTNAIFSA 81
Query: 364 DDIKSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVR 423
+ + E + + IRL+V + G +IGKSGS I EIR+ T ++
Sbjct: 82 FTLITKKFEEWCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQ 141
Query: 424 ISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYS 483
++ P ++ + V + G + + QI L + + PP GA Y
Sbjct: 142 VASEMLP---NSTERAVTLSGSAEQITQCIYQICLVMLES----------PPRGATIPYR 188
Query: 484 SGTGISMPPLL----------------------PSIPPVGPLGYDQRADSGSGIGMLSSS 521
++ P +L P S GI + +
Sbjct: 189 PKPQVTGPVILANGQAFTIQGNYAVPTQEVAKNPLASLAALGLAGMTPASTGGINHTALA 248
Query: 522 SLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRK 581
+L G L ++ + E+ V + +G +IGK G+ +A IR+
Sbjct: 249 ALAG-SQLRTANANRAQQQQH--------------EMTVSNDLIGCIIGKGGTKIAEIRQ 293
Query: 582 ISGATIEMSDSKSSRG---DRVALISGTPEQKRAAENLI 617
ISGA I +S+ + G DR ISG P+ A+ LI
Sbjct: 294 ISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQYLI 332
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 147/340 (43%), Gaps = 46/340 (13%)
Query: 36 SVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKED 95
++ R++ +GS+IGK G+++N R+E+ A++ + D +R+VT+
Sbjct: 23 TLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDG--SCPERIVTVSGTTN---- 76
Query: 96 VEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANII 155
A A + + D K K + +++VP+SQ ++I
Sbjct: 77 --------------AIFSAFTLITKKFEEWCSQFNDVGKVGKTQIPIRLIVPASQCGSLI 122
Query: 156 GKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIM 215
GK+G+ IK +R T SI+V + T + V +SG +E + + ++ I +M
Sbjct: 123 GKSGSKIKEIRQTTGCSIQVASEMLPNST-------ERAVTLSGSAEQITQCIYQICLVM 175
Query: 216 YKFSPR-EDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVP 274
+ PR IP + P +I ++ + G Y A P P AA
Sbjct: 176 LESPPRGATIPYRPKPQVTGP--VILANGQAFTIQGNY--AVPTQEVAKNPLASLAALGL 231
Query: 275 DLQGYADTGNTWPVYSTGLSLVSG----LVGASQSEELVIRVLCPFNKIGRVIGKGGGTI 330
A TG + T L+ ++G A+++++ + + IG +IGKGG I
Sbjct: 232 AGMTPASTGG---INHTALAALAGSQLRTANANRAQQQQHEMTVSNDLIGCIIGKGGTKI 288
Query: 331 KSIRQASGAQIDVDDTKD----NRDECVITVTAIESPDDI 366
IRQ SGA I + + ++ N D T+T +PD +
Sbjct: 289 AEIRQISGAMIRISNCEEREGGNTDR---TITISGNPDSV 325
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 6/82 (7%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+TIRL++ K +G IIGK G I+N R+ + A + IS G P + +V V G
Sbjct: 23 TLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCP------ERIVTVSGTTN 76
Query: 448 SVRDALVQIILRLRDDALKDRD 469
++ A I + + + D
Sbjct: 77 AIFSAFTLITKKFEEWCSQFND 98
>gi|158293685|ref|XP_557579.3| AGAP004942-PA [Anopheles gambiae str. PEST]
gi|157016566|gb|EAL40201.3| AGAP004942-PA [Anopheles gambiae str. PEST]
Length = 382
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 151/352 (42%), Gaps = 55/352 (15%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESP---- 363
L IR++ ++G +IGK G +K R+ SGA+I++ D + E ++TV+ S
Sbjct: 22 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDC--SCPERIVTVSGSRSAIYKA 79
Query: 364 -DDIKSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADV 422
I E Q N + + IRL+V + G +IGK GS I EIR+ T +
Sbjct: 80 FTLITKKFEEWCSQFQDNANTQGKPQIPIRLIVPASQCGSLIGKGGSKIKEIREITGCSI 139
Query: 423 RISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIY 482
+++ P ++ + V + G ++ + I + + +PP GA Y
Sbjct: 140 QVASEMLP---NSTERAVTLSGSAEAITQCIYHICCVMLE----------SPPKGATIPY 186
Query: 483 SSGTGISMPPLLPSIPPVGPLG-YDQRADSGSGIG------MLSSSSLYGYGSLSMGDSP 535
++ P ++ + G Y A SGI + + S + G +P
Sbjct: 187 RPKPQVNGPVIVANGQAYTIQGNYAVPAQEVSGIAKNPLAGLAALGLAGAIPSNTGGLNP 246
Query: 536 YGSMSSYSSKLYGGLP--------------------PPL---TLEVLVPANAVGKVIGKA 572
G SS ++ Y +P P+ + E+ VP + +G +IGK
Sbjct: 247 TGKYSSPNALEY--IPHAALAALAGSQLRTNNNRNVAPVQSQSHEMTVPNDLIGCIIGKG 304
Query: 573 GSNLANIRKISGATIEMSDSK---SSRGDRVALISGTPEQKRAAENLIQAFI 621
G+ +A IR+ISGA I +S+ + S DR I+G P+ A+ LI I
Sbjct: 305 GTKIAEIRQISGAMIRISNCEERDSGNTDRTITITGNPDSVALAQYLINMRI 356
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 87/377 (23%), Positives = 151/377 (40%), Gaps = 98/377 (25%)
Query: 36 SVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKED 95
++ R++ +GS+IGK G+++ R+E+ A++ + D +R+VT+
Sbjct: 21 TLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDC--SCPERIVTVSGSRS---- 74
Query: 96 VEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDN-DKKRKEKEECQILVPSSQSANI 154
A A + + DN + + K + +++VP+SQ ++
Sbjct: 75 --------------AIYKAFTLITKKFEEWCSQFQDNANTQGKPQIPIRLIVPASQCGSL 120
Query: 155 IGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAI 214
IGK G+ IK +R T SI+V + T + V +SG +EA+ + ++ I +
Sbjct: 121 IGKGGSKIKEIREITGCSIQVASEMLPNST-------ERAVTLSGSAEAITQCIYHICCV 173
Query: 215 MYKFSPR-EDIPLETTVREAPPSII----------------------------------- 238
M + P+ IP + P I+
Sbjct: 174 MLESPPKGATIPYRPKPQVNGPVIVANGQAYTIQGNYAVPAQEVSGIAKNPLAGLAALGL 233
Query: 239 ---IPSDVPIYPPGGLY--PNADPILPSRSVPSILGAARVPDLQGYADTGNTWPVYSTGL 293
IPS+ P G Y PNA +P ++ ++ G+ + + N PV
Sbjct: 234 AGAIPSNTGGLNPTGKYSSPNALEYIPHAALAALAGSQLRTN-----NNRNVAPV----- 283
Query: 294 SLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD----N 349
SQS E+ + P + IG +IGKGG I IRQ SGA I + + ++ N
Sbjct: 284 --------QSQSHEMTV----PNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEERDSGN 331
Query: 350 RDECVITVTAIESPDDI 366
D T+T +PD +
Sbjct: 332 TDR---TITITGNPDSV 345
Score = 42.7 bits (99), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Query: 381 INDEDDD--TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDE 438
IN DD T+TIRL++ K +G IIGK G I+ R+ + A + IS P +
Sbjct: 12 INLSDDPAVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDCSCP------ER 65
Query: 439 LVEVVGEVGSVRDALVQIILRLRDDALKDRDGS 471
+V V G ++ A I + + + +D +
Sbjct: 66 IVTVSGSRSAIYKAFTLITKKFEEWCSQFQDNA 98
>gi|327275834|ref|XP_003222677.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Anolis carolinensis]
Length = 576
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 153/331 (46%), Gaps = 46/331 (13%)
Query: 292 GLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRD 351
G + SG Q ++ +R+L P +G +IGK G TI++I + + ++IDV K+N
Sbjct: 180 GSPVASGAPVKQQPVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDV-HRKENAG 238
Query: 352 ECVITVTAIESPDDIKSMAVEAVLLLQTKIND-EDDDTVTIRLLVSSKVIGCIIGKSGSI 410
++ +P+ + + ++Q + D + D V +++L + +G +IGK G
Sbjct: 239 AAEKAISIHSTPEGCSAACKMILEIMQKEAKDTKTADEVPLKILAHNNFVGRLIGKEGRN 298
Query: 411 INEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDG 470
+ ++ + T+ + IS + + + V G + + A +I+ ++R+ D
Sbjct: 299 LKKVEQDTETKITISSLQDLTLYNP-ERTITVKGSIENCCRAEQEIMKKVREAYEND--- 354
Query: 471 SRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGML--SSSSLYGYGS 528
V A + S L+P + + + +G+ SS+++ S
Sbjct: 355 -----VAAMSLQSH--------LIPGL-------------NLAAVGLFPASSNAVPPPPS 388
Query: 529 LSMGDSPYGSMSSYSSKLYGGLPPPL-TLEVLVPANAVGKVIGKAGSNLANIRKISGATI 587
G +PY S LPP T+ V +PA AVG +IGK G ++ + + + A+I
Sbjct: 389 SVSGAAPYSSF----------LPPEQETVHVFIPAQAVGAIIGKKGQHIKQLSRFASASI 438
Query: 588 EMSDSKSSRGD-RVALISGTPEQKRAAENLI 617
+++ +++ R+ +I+G PE + A+ I
Sbjct: 439 KIAPAETPDSKVRMVIITGPPEAQFKAQGRI 469
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 97/437 (22%), Positives = 178/437 (40%), Gaps = 96/437 (21%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKEDVEV 98
R+L P +G++IGK G I +I ++T++++ V GA ++ ++I+S
Sbjct: 199 RLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISIHS---------- 248
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
E AA +L++ A D K ++ +IL ++ +IGK
Sbjct: 249 -----TPEGCSAACKMILEIMQKEAK--------DTKTADEVPLKILAHNNFVGRLIGKE 295
Query: 159 GATIKRLRSKTRTSIKVTP-KDAS--EPTHSCAMEFDNFVLISGESEAVKKALFAISAIM 215
G +K++ T T I ++ +D + P + ++ E E +KK A
Sbjct: 296 GRNLKKVEQDTETKITISSLQDLTLYNPERTITVKGSIENCCRAEQEIMKKVREAYE--- 352
Query: 216 YKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYP---NADPILPSRSVPSILGAAR 272
D+ + P + + + GL+P NA P PS S+ GAA
Sbjct: 353 ------NDVAAMSLQSHLIPGLNLAAV-------GLFPASSNAVPPPPS----SVSGAAP 395
Query: 273 VPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKS 332
YS+ L E+ + V P +G +IGK G IK
Sbjct: 396 ----------------YSSFLP----------PEQETVHVFIPAQAVGAIIGKKGQHIKQ 429
Query: 333 IRQASGAQIDVD--DTKDNRDECVITVTAIESPDDIKSMA---VEAVLLLQTKINDEDDD 387
+ + + A I + +T D++ VI I P + + A + L + +++
Sbjct: 430 LSRFASASIKIAPAETPDSKVRMVI----ITGPPEAQFKAQGRIYGKLKEENFFGPKEEV 485
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDE-LVEVVGEV 446
+ + V + G +IGK G +NE++ T A+V + + P D N++ +V+++G
Sbjct: 486 KLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQTP---DENEQVIVKIIGHF 542
Query: 447 GS-------VRDALVQI 456
+ +RD L Q+
Sbjct: 543 YASQMAQRKIRDILAQV 559
Score = 38.9 bits (89), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 58/148 (39%), Gaps = 24/148 (16%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDP-FPGAKDRVVTIYSHVKDK 93
E + P +G++IGK G+ I + + A +K+ P +K R+V I
Sbjct: 403 EQETVHVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPAETPDSKVRMVII------- 455
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
+A K I + K + K E I VP+S +
Sbjct: 456 ---------------TGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGR 500
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+IGK G T+ L++ T + V P+D +
Sbjct: 501 VIGKGGKTVNELQNLTAAEV-VVPRDQT 527
>gi|195486812|ref|XP_002091665.1| GE12124 [Drosophila yakuba]
gi|194177766|gb|EDW91377.1| GE12124 [Drosophila yakuba]
Length = 497
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 88/177 (49%), Gaps = 12/177 (6%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
E +R+L P + G VIGKGG I+ +R A + VDD++ E I ++A DI
Sbjct: 22 EETVRILIPSSIAGAVIGKGGQHIQKMRTQYKATVSVDDSQG--PERTIQISA-----DI 74
Query: 367 KSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISK 426
+S ++ K +E D+ +RLL+ + GC+IGK G I EIR R R K
Sbjct: 75 ESTL--EIITEMLKYFEERDEDFDVRLLIHQSLAGCVIGKGGQKIKEIRDRIGC--RFLK 130
Query: 427 GDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYS 483
+ D +V+ VG+ V DA+ ++I RD +K + + P+ D +Y+
Sbjct: 131 VFSNVAPQSTDRVVQTVGKQSQVIDAVREVITLTRDTPIKGAIHNYD-PMNFDRVYA 186
Score = 42.4 bits (98), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 33/143 (23%)
Query: 26 NEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVT 85
++K + NEE+V RIL P + G+VIGK G+ I +R + +A V V D +R +
Sbjct: 14 DQKRNRRNEETV--RILIPSSIAGAVIGKGGQHIQKMRTQYKATVSVDD--SQGPERTIQ 69
Query: 86 IYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQIL 145
I + ++ ++ + +LK ++R E + ++L
Sbjct: 70 ISADIESTLEIITE---------------MLKYF--------------EERDEDFDVRLL 100
Query: 146 VPSSQSANIIGKAGATIKRLRSK 168
+ S + +IGK G IK +R +
Sbjct: 101 IHQSLAGCVIGKGGQKIKEIRDR 123
Score = 39.3 bits (90), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 53/110 (48%), Gaps = 14/110 (12%)
Query: 131 DNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAME 190
D + R+ +E +IL+PSS + +IGK G I+++R++ + ++ V D+ P + +
Sbjct: 14 DQKRNRRNEETVRILIPSSIAGAVIGKGGQHIQKMRTQYKATVSV--DDSQGPERTIQIS 71
Query: 191 FDNFVLISGESEAVKKALFAISAIMYKFSPR-EDIPLETTVREAPPSIII 239
D ++ L I+ ++ F R ED + + ++ +I
Sbjct: 72 AD-----------IESTLEIITEMLKYFEERDEDFDVRLLIHQSLAGCVI 110
>gi|1360003|emb|CAA66619.1| nuclear poly(C)-binding protein, splicevariant E [Mus musculus]
Length = 349
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 87/349 (24%), Positives = 161/349 (46%), Gaps = 44/349 (12%)
Query: 297 SGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVIT 356
+G++ + L IR+L ++G +IGK G ++K +R+ SGA+I++ + N E +IT
Sbjct: 3 TGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIIT 60
Query: 357 VTAIESPDDIKSMAVEAVL-LLQTKINDEDDDT-------VTIRLLVSSKVIGCIIGKSG 408
+ P + A ++ L+ I+ ++ VT+RL+V + G +IGK G
Sbjct: 61 LAG---PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGG 117
Query: 409 SIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKD- 467
I EIR+ T A V+++ P ++ + + + G S+ + + QI + + + K
Sbjct: 118 CKIKEIRESTGAQVQVAGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLESPPKGV 174
Query: 468 ----RDGSRNPPV---GADHIYSSGT-GISMPPLLPSI--------PPVGPLGYDQRADS 511
R + PV G YS+G+ S P PS+ PP+ A +
Sbjct: 175 TIPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMSLNPDLEGPPL-------EAYT 227
Query: 512 GSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGL---PPPLTLEVLVPANAVGKV 568
G + L L+M S + M+ ++ GL + E+ +P + +G +
Sbjct: 228 IQGQYAIPQPDLTKLHQLAMQQSHF-PMTHGNTGFSAGLDASAQTTSHELTIPNDLIGCI 286
Query: 569 IGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLI 617
I + G+ + IR++SGA I++++ DR I+G+ A+ LI
Sbjct: 287 IRRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLI 335
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 80/360 (22%), Positives = 147/360 (40%), Gaps = 75/360 (20%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH 89
E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R++T
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIIT---- 60
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAV-----ANATDNDKKRKEKEECQI 144
L +A+ K A I + + ++ T++ + ++
Sbjct: 61 ------------------LAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRL 102
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAV 204
+VP+SQ ++IGK G IK +R T ++V T + + I+G +++
Sbjct: 103 VVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNST-------ERAITIAGIPQSI 155
Query: 205 KKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGL-----------YP 253
+ + I +M + P+ T+ P PS P+ GG +P
Sbjct: 156 IECVKQICVVMLESPPK-----GVTIPYRPK----PSSSPVIFAGGQDRYSTGSDSASFP 206
Query: 254 NADPIL--------PSRSVPSILGAARVPD-----LQGYADTGNTWPVYSTGLSLVSGLV 300
+ P + P +I G +P L A + +P+ +GL
Sbjct: 207 HTTPSMSLNPDLEGPPLEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSAGLD 266
Query: 301 GASQ--SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
++Q S EL I P + IG +I + G I IRQ SGAQI + + + + +T+T
Sbjct: 267 ASAQTTSHELTI----PNDLIGCIIRRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTIT 322
>gi|334350025|ref|XP_003342306.1| PREDICTED: poly(rC)-binding protein 2-like [Monodelphis domestica]
gi|444513888|gb|ELV10473.1| Poly(rC)-binding protein 2 [Tupaia chinensis]
Length = 307
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 154/332 (46%), Gaps = 41/332 (12%)
Query: 297 SGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVIT 356
+G++ + L IR+L ++G +IGK G ++K +R+ SGA+I++ + N E +IT
Sbjct: 3 TGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIIT 60
Query: 357 VTAIESPDDIKSMAVEAVL-LLQTKINDEDDDT-------VTIRLLVSSKVIGCIIGKSG 408
+ P + A ++ L+ I+ ++ VT+RL+V + G +IGK G
Sbjct: 61 LAG---PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGG 117
Query: 409 SIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDR 468
I EIR+ T A V+++ P ++ + + + G S+ + + QI + + +
Sbjct: 118 CKIKEIRESTGAQVQVAGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLE------ 168
Query: 469 DGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGS 528
+PP G Y PS PV + +A + G + L
Sbjct: 169 ----SPPKGVTIPYRPK---------PSSSPV--IFAGGQAYTIQGQYAIPQPDLTKLHQ 213
Query: 529 LSMGDSPYGSMSSYSSKLYGGL---PPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGA 585
L+M S + M+ ++ GL + E+ +P + +G +IG+ G+ + IR++SGA
Sbjct: 214 LAMQQSHF-PMTHGNTGFSAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGA 272
Query: 586 TIEMSDSKSSRGDRVALISGTPEQKRAAENLI 617
I++++ DR I+G+ A+ LI
Sbjct: 273 QIKIANPVEGSTDRQVTITGSAASISLAQYLI 304
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 144/339 (42%), Gaps = 64/339 (18%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH 89
E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R++T
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIIT---- 60
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAV-----ANATDNDKKRKEKEECQI 144
L +A+ K A I + + ++ T++ + ++
Sbjct: 61 ------------------LAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRL 102
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAV 204
+VP+SQ ++IGK G IK +R T ++V T + + I+G +++
Sbjct: 103 VVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNST-------ERAITIAGIPQSI 155
Query: 205 KKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSV 264
+ + I +M + P+ T+ P PS P+ GG A I ++
Sbjct: 156 IECVKQICVVMLESPPKG-----VTIPYRPK----PSSSPVIFAGG---QAYTIQGQYAI 203
Query: 265 PSILGAARVPDL---QGYADTGNTWPVYSTGLSLVSGLVGASQ--SEELVIRVLCPFNKI 319
P PDL A + +P+ +GL ++Q S EL I P + I
Sbjct: 204 PQ-------PDLTKLHQLAMQQSHFPMTHGNTGFSAGLDASAQTTSHELTI----PNDLI 252
Query: 320 GRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
G +IG+ G I IRQ SGAQI + + + + +T+T
Sbjct: 253 GCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTIT 291
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 87/216 (40%), Gaps = 68/216 (31%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDV-DDTKDNRDE-------------- 352
+ +R++ P ++ G +IGKGG IK IR+++GAQ+ V D N E
Sbjct: 98 VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIE 157
Query: 353 CV--ITVTAIESP--------------------------------------DDIKSMAVE 372
CV I V +ESP + +A++
Sbjct: 158 CVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQ 217
Query: 373 AVLLLQTKIN-------DEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRIS 425
T N D T + L + + +IGCIIG+ G+ INEIR+ + A ++I+
Sbjct: 218 QSHFPMTHGNTGFSAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIA 277
Query: 426 KGDKPKCADANDELVEVVGEVGSVRDALVQIILRLR 461
+ D V + G S+ +L Q ++ +R
Sbjct: 278 N----PVEGSTDRQVTITGSAASI--SLAQYLINVR 307
>gi|410911650|ref|XP_003969303.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
[Takifugu rubripes]
Length = 581
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 145/313 (46%), Gaps = 49/313 (15%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSM 369
+R+L P +G +IGK G TI+++ + + ++ID+ K+N +T +P+ S
Sbjct: 197 LRMLVPTQFVGAIIGKQGDTIRNLTKQTHSKIDI-HRKENAGAAEKPITIHSTPEG-SSN 254
Query: 370 AVEAVLLLQTK--INDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKG 427
A ++ + K I+ + + + +++LV + +G +IGK G + +I + T + IS
Sbjct: 255 ACRTIMEIMQKEAIDTKFTEEIPLKILVHNNFVGRLIGKEGRNLKKIEQDTGTKITISSL 314
Query: 428 DKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSGTG 487
+ + + V G + + A +++ ++R+ D V A ++ S+
Sbjct: 315 QDLTVYNP-ERTITVKGAIENCGRAEEEVMKKIREAYESD--------VAAMNLQSN--- 362
Query: 488 ISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDS-----PYGSMSSY 542
L+P + L++ L+ G+ MG S P G+ Y
Sbjct: 363 -----LIPGL-------------------NLNALGLFPSGTPGMGPSMSSLPPPGAHGGY 398
Query: 543 SSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS-SRGDRVA 601
S +GG P T+ + +P AVG +IGK G ++ + +GA+I+++ ++ R+
Sbjct: 399 S---FGGNPESETVHLFIPTLAVGAIIGKQGQHIKQLSHFAGASIKIAPAEGMDPKHRMV 455
Query: 602 LISGTPEQKRAAE 614
+I G PE + A+
Sbjct: 456 IIVGPPEAQFKAQ 468
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 100/451 (22%), Positives = 178/451 (39%), Gaps = 88/451 (19%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKEDVEV 98
R+L P +G++IGK G I ++ ++T +++ + GA ++ +TI+S + +
Sbjct: 198 RMLVPTQFVGAIIGKQGDTIRNLTKQTHSKIDIHRKENAGAAEKPITIHSTPEGSSNA-- 255
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
C +++ A D K E+ +ILV ++ +IGK
Sbjct: 256 ----------CRTIMEIMQKEAI-----------DTKFTEEIPLKILVHNNFVGRLIGKE 294
Query: 159 GATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKF 218
G +K++ T T I + S + + + G A++ A +M K
Sbjct: 295 GRNLKKIEQDTGTKITI-----SSLQDLTVYNPERTITVKG---AIENCGRAEEEVMKKI 346
Query: 219 SPREDIPLETTVREAPPSIIIPSDVPIYPPG------GLYPNADPIL-PSRSVPSILGAA 271
RE + ++I PG GL+P+ P + PS S GA
Sbjct: 347 --REAYESDVAAMNLQSNLI---------PGLNLNALGLFPSGTPGMGPSMSSLPPPGAH 395
Query: 272 RVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIK 331
GY+ GN E + + P +G +IGK G IK
Sbjct: 396 -----GGYSFGGN--------------------PESETVHLFIPTLAVGAIIGKQGQHIK 430
Query: 332 SIRQASGAQIDVDDTK--DNRDECVITVTAIESPDDIKSMA-VEAVLLLQTKINDEDDDT 388
+ +GA I + + D + VI V E+ K+ + L + +++
Sbjct: 431 QLSHFAGASIKIAPAEGMDPKHRMVIIVGPPEA--QFKAQCRIFGKLKEENFFGPKEEVK 488
Query: 389 VTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDE-LVEVVGEVG 447
+ + V S G +IGK G +NE++ T A+V + + P D D+ +V+++G
Sbjct: 489 LEAHIKVPSFAAGRVIGKGGKTVNELQNLTCAEVVVPRDQTP---DEKDQVIVKIIGHFF 545
Query: 448 SVRDAL--VQIILRL--RDDALKDRDGSRNP 474
+ + A +Q IL R LK G++ P
Sbjct: 546 ACQLAQRKIQEILAQVRRQQQLKPAPGAQPP 576
Score = 43.1 bits (100), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 60/155 (38%), Gaps = 32/155 (20%)
Query: 32 GNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKV-----VDPFPGAKDRVVTI 86
GN ES + P +G++IGK G+ I + A +K+ +DP K R+V I
Sbjct: 402 GNPESETVHLFIPTLAVGAIIGKQGQHIKQLSHFAGASIKIAPAEGMDP----KHRMVII 457
Query: 87 YSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILV 146
+A K I + K + K E I V
Sbjct: 458 ----------------------VGPPEAQFKAQCRIFGKLKEENFFGPKEEVKLEAHIKV 495
Query: 147 PSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDAS 181
PS + +IGK G T+ L++ T + V P+D +
Sbjct: 496 PSFAAGRVIGKGGKTVNELQNLTCAEV-VVPRDQT 529
>gi|410970837|ref|XP_003991883.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 2 [Felis catus]
Length = 493
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 139/322 (43%), Gaps = 62/322 (19%)
Query: 301 GASQSEE--LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
G+SQ+ + +R+L P +G +IGK G TIK+I + + +++D+ K+N VT
Sbjct: 122 GSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHR-KENSGAAEKPVT 180
Query: 359 AIESPDDIKSMAVEAVLLLQTKINDEDD--DTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
+P+ S A +L + K DE + + +++L + ++G +IGK G + +I
Sbjct: 181 IHATPEGT-SEACRMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEH 239
Query: 417 RTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPV 476
T + IS + + + V G V + +A V+I+ +LR+ D
Sbjct: 240 ETGTKITISSLQDLSIYNP-ERTITVKGTVEACANAEVEIMKKLREAFEND--------- 289
Query: 477 GADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPY 536
ML+ ++ GY S +
Sbjct: 290 ----------------------------------------MLAVNTHSGYFSSLYPPHQF 309
Query: 537 GSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS-S 595
G + S P + + +P AVG +IGK G+++ + + +GA+I+++ ++
Sbjct: 310 GPFPHHHS-----YPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPD 364
Query: 596 RGDRVALISGTPEQKRAAENLI 617
+R+ +I+G PE + A+ I
Sbjct: 365 VSERMVIITGPPEAQFKAQGRI 386
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 102/223 (45%), Gaps = 33/223 (14%)
Query: 27 EKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARV--------KVVDPFPG 78
E DE E + +IL +G++G +IGK G+ + I ET ++ + +P
Sbjct: 202 EADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNP--- 258
Query: 79 AKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKV--HAAIANAVANATD----- 131
+R +T+ V+ + EV+ +E A ++ +L V H+ +++
Sbjct: 259 --ERTITVKGTVEACANAEVEIMKKLRE---AFENDMLAVNTHSGYFSSLYPPHQFGPFP 313
Query: 132 NDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEF 191
+ E+E + +P+ IIGK GA IK+L SIK+ P + + +
Sbjct: 314 HHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVS------- 366
Query: 192 DNFVLISGESEAVKKALFAISAIMYK---FSPREDIPLETTVR 231
+ V+I+G EA KA I + + F+P+E++ LE +R
Sbjct: 367 ERMVIITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIR 409
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 81/357 (22%), Positives = 145/357 (40%), Gaps = 62/357 (17%)
Query: 142 CQILVPSSQSANIIGKAGATIKRLRSKTRT-----------------SIKVTPKDASEPT 184
+ILVP+ IIGK G TIK + +T++ +I TP+ SE
Sbjct: 133 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTSE-- 190
Query: 185 HSCAMEFDNFVLISGESEAVKKA------LFAISAIMYKFSPREDIPLETTVREAPPSII 238
+C M + ++ E++ K A + A + ++ + +E L+ E I
Sbjct: 191 -ACRMILE---IMQKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKIT 246
Query: 239 IPS--DVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQGYADTG-NTWPVYSTGLSL 295
I S D+ IY N + + + A V ++ + N +T
Sbjct: 247 ISSLQDLSIY-------NPERTITVKGTVEACANAEVEIMKKLREAFENDMLAVNTHSGY 299
Query: 296 VSGLVGASQS----------EELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDD 345
S L Q E+ ++ + P +G +IGK G IK + + +GA I +
Sbjct: 300 FSSLYPPHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAP 359
Query: 346 TK--DNRDECVITVTAIESPDDIKSMA---VEAVLLLQTKINDEDDDTVTIRLLVSSKVI 400
+ D + VI I P + + A + L + N +++ + + V S
Sbjct: 360 AEGPDVSERMVI----ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTA 415
Query: 401 GCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDE-LVEVVGEVGSVRDALVQI 456
G +IGK G +NE++ T A+V + + P D N+E +V ++G + + A +I
Sbjct: 416 GRVIGKGGKTVNELQNLTSAEVIVPRDQTP---DENEEVIVRIIGHFFASQTAQRKI 469
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 58/148 (39%), Gaps = 24/148 (16%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPF-PGAKDRVVTIYSHVKDK 93
E I + P +G++IGK G I + + A +K+ P +R+V I
Sbjct: 320 EQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII------- 372
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
+A K I + + K + K E I VPSS +
Sbjct: 373 ---------------TGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGR 417
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+IGK G T+ L++ T + + P+D +
Sbjct: 418 VIGKGGKTVNELQNLTSAEV-IVPRDQT 444
>gi|348503027|ref|XP_003439068.1| PREDICTED: poly(rC)-binding protein 4-like [Oreochromis niloticus]
Length = 446
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 146/334 (43%), Gaps = 43/334 (12%)
Query: 36 SVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKED 95
++ R+L +GS+IGK G+ + IR+E+ ARV + + +R++TI
Sbjct: 15 TLTLRLLMHGKEVGSIIGKKGETVKRIREESSARVNISEG--SCPERIITITG------- 65
Query: 96 VEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANII 155
D F A K+ + VAN T + K ++++P+SQ ++I
Sbjct: 66 -STDSVFR------AFTMITYKLEEDLTALVANGTISSKP---PVTLRLVIPASQCGSLI 115
Query: 156 GKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIM 215
GK GA IK +R T I+V T + V ISG ++V + + I ++
Sbjct: 116 GKGGAKIKEIRESTGAQIQVAGDLLPNST-------ERGVTISGNQDSVIQCVKLICTVI 168
Query: 216 YKFSPR-EDIPLETTVREAPPSIIIPSDVPI----YPPGGLYPNADPILPSRSVPSILGA 270
+ P+ IP + +P +++I + + P LY A L + ++
Sbjct: 169 LESPPKGATIPYRPS--PSPAALLIAGNQVFEASEFAPHPLYSVAQGGLDLQQAYTLQNQ 226
Query: 271 ARVPD-----LQGYADTGNTWPVYSTGLSLVSGLVGASQ-SEELVIRVLCPFNKIGRVIG 324
+P L + P+ +++ G+ SQ S+EL+I P + IG +IG
Sbjct: 227 YGIPHSELAKLHQLSVQQGLSPIAQPASAVIPGMDSNSQTSQELLI----PNDLIGSIIG 282
Query: 325 KGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
+ G I IRQ SGAQI + D + +T+T
Sbjct: 283 RQGTKINEIRQVSGAQIKIGSQLDGTSDRHVTIT 316
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 156/355 (43%), Gaps = 78/355 (21%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
L +R+L ++G +IGK G T+K IR+ S A++++ + + E +IT+T S D +
Sbjct: 16 LTLRLLMHGKEVGSIIGKKGETVKRIREESSARVNISE--GSCPERIITITG--STDSV- 70
Query: 368 SMAVEAVLLLQTKINDEDDDT-------------VTIRLLVSSKVIGCIIGKSGSIINEI 414
A ++ K+ E+D T VT+RL++ + G +IGK G+ I EI
Sbjct: 71 ---FRAFTMITYKL--EEDLTALVANGTISSKPPVTLRLVIPASQCGSLIGKGGAKIKEI 125
Query: 415 RKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNP 474
R+ T A ++++ P ++ + V + G +D+++Q + + L+ +P
Sbjct: 126 RESTGAQIQVAGDLLP---NSTERGVTISGN----QDSVIQCVKLICTVILE------SP 172
Query: 475 PVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLY--GYGSLSMG 532
P GA P PS P L + S + LY G L +
Sbjct: 173 PKGATI-----------PYRPSPSPAALLIAGNQVFEAS---EFAPHPLYSVAQGGLDLQ 218
Query: 533 DS-----PYGSMSSYSSKLY-----GGLPP----------------PLTLEVLVPANAVG 566
+ YG S +KL+ GL P + E+L+P + +G
Sbjct: 219 QAYTLQNQYGIPHSELAKLHQLSVQQGLSPIAQPASAVIPGMDSNSQTSQELLIPNDLIG 278
Query: 567 KVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFI 621
+IG+ G+ + IR++SGA I++ DR I+GTP A+ LI + +
Sbjct: 279 SIIGRQGTKINEIRQVSGAQIKIGSQLDGTSDRHVTITGTPVSINLAQYLITSCL 333
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 9/92 (9%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+T+RLL+ K +G IIGK G + IR+ + A V IS+G P + ++ + G
Sbjct: 15 TLTLRLLMHGKEVGSIIGKKGETVKRIREESSARVNISEGSCP------ERIITITGSTD 68
Query: 448 SVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
SV A I +L +D + + S PPV
Sbjct: 69 SVFRAFTMITYKLEEDLTALVANGTISSKPPV 100
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 552 PPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMS-DSKSSRGDRVALISGTPEQK 610
PP+TL +++PA+ G +IGK G+ + IR+ +GA I+++ D + +R ISG +
Sbjct: 98 PPVTLRLVIPASQCGSLIGKGGAKIKEIRESTGAQIQVAGDLLPNSTERGVTISGNQDSV 157
Query: 611 RAAENLIQAFIM 622
LI I+
Sbjct: 158 IQCVKLICTVIL 169
>gi|212275472|ref|NP_001130567.1| uncharacterized protein LOC100191666 [Zea mays]
gi|194689502|gb|ACF78835.1| unknown [Zea mays]
gi|413934214|gb|AFW68765.1| hypothetical protein ZEAMMB73_642279 [Zea mays]
Length = 580
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 115/248 (46%), Gaps = 33/248 (13%)
Query: 14 NDRDGKNQKRRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV 73
+D D + E G + ++R+L P +G++IG G+ + + +ETRA V+++
Sbjct: 32 DDEDSGDTTSSAGESKYPGWPGTTVFRMLIPAQKVGAIIGHKGERVRRLCEETRACVRII 91
Query: 74 DPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIAN--AVANATD 131
A ++ V I+ +E ++ EPL A DALL+V+ N ++ D
Sbjct: 92 GGHLCAAEQAVIIFG----REQLD--------EPLPPAMDALLRVYQQTINNDSLDVGPD 139
Query: 132 NDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEF 191
N R+ IL PS Q+A++IG+ G I + ++T I+V D A+E
Sbjct: 140 NVIVRR------ILAPSEQAASLIGEHGVMINSIMEASQTDIRVLDDDLP----PVALEE 189
Query: 192 DNFVLISGESEAVKKALFAISAIMYKF-SPREDIPLETTVREAPPSIIIPSDVPI----- 245
D + I G V KAL +++ + K+ R IPL P I+ D+P
Sbjct: 190 DRVIEIWGSPAGVYKALELVASHLRKYLVDRSVIPLFDRYVPMP---ILHMDMPPCHYID 246
Query: 246 YPPGGLYP 253
YP G ++P
Sbjct: 247 YPEGPVHP 254
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 91/194 (46%), Gaps = 14/194 (7%)
Query: 281 DTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQ 340
D+G+T S G S G G + V R+L P K+G +IG G ++ + + + A
Sbjct: 35 DSGDT--TSSAGESKYPGWPGTT-----VFRMLIPAQKVGAIIGHKGERVRRLCEETRAC 87
Query: 341 IDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVL-LLQTKINDED-----DDTVTIRLL 394
+ + E + + E D+ A++A+L + Q IN++ D+ + R+L
Sbjct: 88 VRIIGGHLCAAEQAVIIFGREQLDEPLPPAMDALLRVYQQTINNDSLDVGPDNVIVRRIL 147
Query: 395 VSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALV 454
S+ +IG+ G +IN I + ++ D+R+ D P A D ++E+ G V AL
Sbjct: 148 APSEQAASLIGEHGVMINSIMEASQTDIRVLDDDLPPVALEEDRVIEIWGSPAGVYKALE 207
Query: 455 QIILRLRDDALKDR 468
+ LR L DR
Sbjct: 208 LVASHLR-KYLVDR 220
>gi|376338927|gb|AFB33992.1| hypothetical protein CL1760Contig1_01, partial [Larix decidua]
gi|376338929|gb|AFB33993.1| hypothetical protein CL1760Contig1_01, partial [Larix decidua]
gi|376338931|gb|AFB33994.1| hypothetical protein CL1760Contig1_01, partial [Larix decidua]
gi|376338933|gb|AFB33995.1| hypothetical protein CL1760Contig1_01, partial [Larix decidua]
Length = 86
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 56/74 (75%), Gaps = 1/74 (1%)
Query: 389 VTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRI-SKGDKPKCADANDELVEVVGEVG 447
+T +LL+ S GC++GK G+II+E+RK+T+A++RI K D P CA +DE+V++VG++
Sbjct: 3 ITTKLLIPSNQTGCLLGKGGAIISEMRKQTRANIRILPKEDLPPCALDSDEMVQIVGDIR 62
Query: 448 SVRDALVQIILRLR 461
+ R ALVQ+ RLR
Sbjct: 63 AARAALVQVTSRLR 76
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 49/80 (61%), Gaps = 3/80 (3%)
Query: 143 QILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESE 202
++L+PS+Q+ ++GK GA I +R +TR +I++ PK+ P CA++ D V I G+
Sbjct: 6 KLLIPSNQTGCLLGKGGAIISEMRKQTRANIRILPKEDLPP---CALDSDEMVQIVGDIR 62
Query: 203 AVKKALFAISAIMYKFSPRE 222
A + AL +++ + F RE
Sbjct: 63 AARAALVQVTSRLRSFIHRE 82
>gi|326510613|dbj|BAJ87523.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326528939|dbj|BAJ97491.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 360
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 148/327 (45%), Gaps = 32/327 (9%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD---NRDECVITVTAIESPDDI 366
+R L G +IGKGG TI + SGA+I + + + ++ +I V+ + + +
Sbjct: 51 LRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRIIMVSGLFD-EVV 109
Query: 367 KSMA-VEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRIS 425
K+M V LL + + ++E + RL+V + G IIGK G+ I + + A ++IS
Sbjct: 110 KAMELVLEKLLSEGEESNEAEARPKFRLVVPNSSCGGIIGKGGATIKSFIEDSHAGIKIS 169
Query: 426 KGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSG 485
D +D LV + G + S A+ I+ +L +D PP + +G
Sbjct: 170 PQDN-NFVGLHDRLVTITGPLNSQMRAIHLILSKLSEDV-------HYPPNLSSPFPYAG 221
Query: 486 TGISMPPLLPSIPPVG----PLGYDQRADSG-SGIGMLSSSSLYGYGSLSMGDSPYGSMS 540
G P P+ PVG P+ Y+ + G +G G + +P S +
Sbjct: 222 LGF---PSYPAAVPVGYMIPPVPYNNTVNYGPNGYAAPGGGGGGGRYQNNKPGTPVRSPA 278
Query: 541 SYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSK---SSRG 597
+ ++ + + V +G V+G+AG N+ I + SGA I++SD +
Sbjct: 279 NNDAQE--------SHTIGVADEHIGAVVGRAGRNITEIIQASGARIKISDRGDFIAGTS 330
Query: 598 DRVALISGTPEQKRAAENLIQAFIMAT 624
DR I+G+ E +AAE +I + A+
Sbjct: 331 DRKVTITGSSEAIQAAEAMIMQRVTAS 357
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 137/348 (39%), Gaps = 66/348 (18%)
Query: 15 DRDGKNQKRRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV- 73
DR + + +D+K E+ R L + G +IGK G IN + ++ AR+++
Sbjct: 29 DRPDADHDPAADHEDDK--EKPTHLRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSR 86
Query: 74 --DPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATD 131
+ FPG DR++ + D ++K + + + +
Sbjct: 87 SHEFFPGTNDRIIMV----------------------SGLFDEVVKAMELVLEKLLSEGE 124
Query: 132 NDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEF 191
+ + + + +++VP+S IIGK GATIK + IK++P+D ++
Sbjct: 125 ESNEAEARPKFRLVVPNSSCGGIIGKGGATIKSFIEDSHAGIKISPQD-----NNFVGLH 179
Query: 192 DNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGL 251
D V I+G + + AI I+ K S ED+ PP++ P +P GL
Sbjct: 180 DRLVTITG---PLNSQMRAIHLILSKLS--EDV-------HYPPNLSSP-----FPYAGL 222
Query: 252 ----YPNADPILPSRSVPSILGAARVPDLQGYADTGNTWPV-------YSTGLSLVSGLV 300
YP A P+ +P + V Y G P Y
Sbjct: 223 GFPSYPAAVPV--GYMIPPVPYNNTV----NYGPNGYAAPGGGGGGGRYQNNKPGTPVRS 276
Query: 301 GASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD 348
A+ + + IG V+G+ G I I QASGA+I + D D
Sbjct: 277 PANNDAQESHTIGVADEHIGAVVGRAGRNITEIIQASGARIKISDRGD 324
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Query: 383 DEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEV 442
D+ + +R LVS+ GCIIGK GS IN+ + ++ A +++S+ + ND ++ V
Sbjct: 43 DDKEKPTHLRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSHE-FFPGTNDRIIMV 101
Query: 443 VGEVGSVRDALVQIILRLRDDALKDRDGSRNP 474
G V A+ ++ +L + + + P
Sbjct: 102 SGLFDEVVKAMELVLEKLLSEGEESNEAEARP 133
>gi|321475563|gb|EFX86525.1| hypothetical protein DAPPUDRAFT_307836 [Daphnia pulex]
Length = 364
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 87/338 (25%), Positives = 151/338 (44%), Gaps = 29/338 (8%)
Query: 298 GLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITV 357
GL + S L IR+L ++G +IGK G +K R+ SGA+I++ D + E ++T+
Sbjct: 8 GLPHDAPSVTLTIRLLMAGKEVGSIIGKKGEIVKRFREESGARINISD--GSCPERIVTI 65
Query: 358 TAIESPDDIKSMAVEAVLLLQTKINDE----------DDDTVTIRLLVSSKVIGCIIGKS 407
T + D I +A L+ K+ +E +T+RL++ + G +IGK
Sbjct: 66 TG--TTDAI----FKAFNLICKKLEEEVGGPLAGTAIPRPPITLRLIMPASQCGSLIGKG 119
Query: 408 GSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKD 467
GS I EIR+ T A V ++ P ++ + V V G ++ + I + + K
Sbjct: 120 GSKIKEIREITGASVVVASEMLP---NSTERAVTVSGTSDAITQCIYHICCVMLESPPKG 176
Query: 468 RDGSR--NPPVGADHIYSSGTGISMPP--LLPSIPPVGPLGYDQRADSGSGIGMLSSSSL 523
P VG I + G ++ +P+ P + L + A+ + + +
Sbjct: 177 ATIPYRPKPQVGGPVILAGGQAYTIQGNYAVPATPDMNKLSGNPLANLAALGLGGLTGTG 236
Query: 524 Y--GYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRK 581
+ ++ + S P + E+ VP +G +IGK G+ +A IR+
Sbjct: 237 GGGSMNASALAALAGSQLRSGGGGGPQSGAPQQSQEMAVPNELIGCIIGKGGTKIAEIRQ 296
Query: 582 ISGATIEMSDS--KSSRGDRVALISGTPEQKRAAENLI 617
ISGA I +S+ + S +R I+GT E A+ LI
Sbjct: 297 ISGAMIRISNCEDRESSSERTITITGTAESVALAQYLI 334
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 84/186 (45%), Gaps = 27/186 (14%)
Query: 36 SVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKED 95
++ R+L +GS+IGK G+++ R+E+ AR+ + D +R+VTI
Sbjct: 17 TLTIRLLMAGKEVGSIIGKKGEIVKRFREESGARINISDG--SCPERIVTITG------- 67
Query: 96 VEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANII 155
D F +C K+ + +A + ++++P+SQ ++I
Sbjct: 68 -TTDAIFKAFNLICK------KLEEEVGGPLAGTAIP----RPPITLRLIMPASQCGSLI 116
Query: 156 GKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIM 215
GK G+ IK +R T S+ V + T + V +SG S+A+ + ++ I +M
Sbjct: 117 GKGGSKIKEIREITGASVVVASEMLPNST-------ERAVTVSGTSDAITQCIYHICCVM 169
Query: 216 YKFSPR 221
+ P+
Sbjct: 170 LESPPK 175
>gi|119193374|ref|XP_001247293.1| hypothetical protein CIMG_01064 [Coccidioides immitis RS]
gi|303312121|ref|XP_003066072.1| KH domain containing protein [Coccidioides posadasii C735 delta
SOWgp]
gi|240105734|gb|EER23927.1| KH domain containing protein [Coccidioides posadasii C735 delta
SOWgp]
gi|320040053|gb|EFW21987.1| KH domain RNA binding protein [Coccidioides posadasii str.
Silveira]
gi|392863461|gb|EAS35786.2| KH domain RNA binding protein [Coccidioides immitis RS]
Length = 489
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 102/394 (25%), Positives = 168/394 (42%), Gaps = 78/394 (19%)
Query: 285 TWPVYSTG------LSLVSGLVGASQSEE--LVIRVLCPFNKIGRVIGKGGGTIKSIRQA 336
T P+ ST S G +Q E + IR + + IGKGG + IR+
Sbjct: 102 TQPIQSTASHNDRATSQAPGQSHGTQDETGFIHIRAVISSAEAATCIGKGGENVSQIRRL 161
Query: 337 SGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKINDEDDD--------T 388
SGA+ V D E ++TV+ P D +A L+ +N+E D T
Sbjct: 162 SGAKCTVSDYTRGAVERILTVSG---PQD---AVAKAFGLIIRTLNNEPLDSPSTAQSKT 215
Query: 389 VTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGS 448
+RLL+ +IG IIGKSG I EI++ + A R++ D LV ++G +
Sbjct: 216 YPLRLLIPHILIGSIIGKSGVRIREIQEHSGA--RLNASDSCLPLSTERSLV-ILGVADA 272
Query: 449 VRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSS-------GTGISMPPLLPSIPPVG 501
V A + L + L +R G P + + S G+ + P +P P G
Sbjct: 273 VHIATYYVAATLVEQ-LTERFGG---PAASAYATRSGGPAGVVPGGMQVVPYVPQ-PAGG 327
Query: 502 PLGY-----------DQRADSGSGI-----------GM-----LSSSSLYGY-GSLSMGD 533
G+ ++ +G G+ GM ++S GY G+
Sbjct: 328 QYGHPDSFKRHHPQANRAMSTGYGVPYMHGPGPSPHGMQQPIHYNASPRQGYTGAGPHQP 387
Query: 534 SPYGSMSSYSSK----------LYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKIS 583
+PYG+ S + GG PLT ++ +P + VG +IGK G+ + IR +S
Sbjct: 388 APYGAPQPPHSHGTPAQPMGAPVAGG---PLTQQIFIPNDMVGAIIGKGGAKINEIRHLS 444
Query: 584 GATIEMSDSKSSRGDRVALISGTPEQKRAAENLI 617
G+ I++++ + + +R+ I+GT E + A ++
Sbjct: 445 GSVIKINEPQDNSNERLVTITGTQECNQMALYML 478
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 85/382 (22%), Positives = 160/382 (41%), Gaps = 89/382 (23%)
Query: 50 SVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLC 109
+ IGK G+ ++ IR+ + A+ V D GA +R++T+
Sbjct: 146 TCIGKGGENVSQIRRLSGAKCTVSDYTRGAVERILTV----------------------S 183
Query: 110 AAQDALLKVHAAIANAVAN-ATDNDKKRKEKE-ECQILVPSSQSANIIGKAGATIKRLRS 167
QDA+ K I + N D+ + K ++L+P +IIGK+G I+ ++
Sbjct: 184 GPQDAVAKAFGLIIRTLNNEPLDSPSTAQSKTYPLRLLIPHILIGSIIGKSGVRIREIQE 243
Query: 168 KTRTSIKVTPKDASEPTHSC-AMEFDNFVLISGESEAVKKALFAISA-IMYKFSPREDIP 225
+ + +AS+ SC + + ++I G ++AV A + ++A ++ + + R P
Sbjct: 244 HSGARL-----NASD---SCLPLSTERSLVILGVADAVHIATYYVAATLVEQLTERFGGP 295
Query: 226 LETTVREAPPSI---------IIPSDVPIYPPGGLY----------PNADPILPS-RSVP 265
+ ++P VP P GG Y P A+ + + VP
Sbjct: 296 AASAYATRSGGPAGVVPGGMQVVPY-VP-QPAGGQYGHPDSFKRHHPQANRAMSTGYGVP 353
Query: 266 SILGAARVPD------------LQGY--------ADTGNTWPVYSTGLS---LVSGLVGA 302
+ G P QGY A G P +S G + + + G
Sbjct: 354 YMHGPGPSPHGMQQPIHYNASPRQGYTGAGPHQPAPYGAPQPPHSHGTPAQPMGAPVAGG 413
Query: 303 SQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIES 362
++++ I P + +G +IGKGG I IR SG+ I +++ +DN +E ++T+T +
Sbjct: 414 PLTQQIFI----PNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQDNSNERLVTITGTQE 469
Query: 363 PDDIKSMAVEAVLLLQTKINDE 384
+ + A+ +L +++ E
Sbjct: 470 CNQM------ALYMLYSRLESE 485
Score = 39.3 bits (90), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 31/47 (65%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTI 86
+I P+ ++G++IGK G IN IR + + +K+ +P + +R+VTI
Sbjct: 418 QIFIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQDNSNERLVTI 464
>gi|334350022|ref|XP_003342305.1| PREDICTED: poly(rC)-binding protein 2-like [Monodelphis domestica]
Length = 320
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 158/336 (47%), Gaps = 36/336 (10%)
Query: 297 SGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVIT 356
+G++ + L IR+L ++G +IGK G ++K +R+ SGA+I++ + N E +IT
Sbjct: 3 TGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIIT 60
Query: 357 VTAIESPDDIKSMAVEAVL-LLQTKINDEDDDT-------VTIRLLVSSKVIGCIIGKSG 408
+ P + A ++ L+ I+ ++ VT+RL+V + G +IGK G
Sbjct: 61 LAG---PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGG 117
Query: 409 SIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDR 468
I EIR+ T A V+++ P ++ + + + G S+ + + QI + + + K
Sbjct: 118 CKIKEIRESTGAQVQVAGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLESPPKGV 174
Query: 469 DGSRNP-PVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYG 527
P P + I++ G ++ +IP Q A S +
Sbjct: 175 TIPYRPKPSSSPVIFAGGQAYTIQGQY-AIPQPDLTKLHQLAMQQS------------HF 221
Query: 528 SLSMGDSPYGSMSSYSSKL---YGGL---PPPLTLEVLVPANAVGKVIGKAGSNLANIRK 581
++ G++ + + S S ++ + GL + E+ +P + +G +IG+ G+ + IR+
Sbjct: 222 PMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQ 281
Query: 582 ISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLI 617
+SGA I++++ DR I+G+ A+ LI
Sbjct: 282 MSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLI 317
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 149/352 (42%), Gaps = 77/352 (21%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH 89
E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R++T
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIIT---- 60
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAV-----ANATDNDKKRKEKEECQI 144
L +A+ K A I + + ++ T++ + ++
Sbjct: 61 ------------------LAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRL 102
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAV 204
+VP+SQ ++IGK G IK +R T ++V T + + I+G +++
Sbjct: 103 VVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNST-------ERAITIAGIPQSI 155
Query: 205 KKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSV 264
+ + I +M + P+ T+ P PS P+ GG A I ++
Sbjct: 156 IECVKQICVVMLESPPKG-----VTIPYRPK----PSSSPVIFAGG---QAYTIQGQYAI 203
Query: 265 PSILGAARVPDL---QGYADTGNTWPVY--STGLSLV-----------SGLVGASQ--SE 306
P PDL A + +P+ +TG S + +GL ++Q S
Sbjct: 204 PQ-------PDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSH 256
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
EL I P + IG +IG+ G I IRQ SGAQI + + + + +T+T
Sbjct: 257 ELTI----PNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTIT 304
Score = 42.4 bits (98), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Query: 383 DEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEV 442
D T + L + + +IGCIIG+ G+ INEIR+ + A ++I+ + D V +
Sbjct: 248 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN----PVEGSTDRQVTI 303
Query: 443 VGEVGSVRDALVQIILRLR 461
G S+ +L Q ++ +R
Sbjct: 304 TGSAASI--SLAQYLINVR 320
>gi|8699624|gb|AAF78762.1|AF275629_1 bancal protein [Drosophila melanogaster]
Length = 508
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 88/177 (49%), Gaps = 12/177 (6%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
E +R+L P + G VIGKGG I+ +R A + VDD++ E I ++A DI
Sbjct: 22 EETVRILIPSSIAGAVIGKGGQHIQKMRTQYKATVSVDDSQG--PERTIQISA-----DI 74
Query: 367 KSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISK 426
+S ++ K +E D+ +RLL+ + GC+IGK G I EIR R R K
Sbjct: 75 ESTL--EIITEMLKYFEERDEDFDVRLLIHQSLAGCVIGKGGQKIKEIRDRIGC--RFLK 130
Query: 427 GDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYS 483
+ D +V+ VG+ V +A+ ++I RD +K + + P+ D +Y+
Sbjct: 131 VFSNVAPQSTDRVVQTVGKQSQVIEAVREVITLTRDTPIKGAIHNYD-PMNFDRVYA 186
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 70/155 (45%), Gaps = 41/155 (26%)
Query: 22 KRRINE-----KDEKGN---EESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV 73
KR +N+ +D+K N EE+V RIL P + G+VIGK G+ I +R + +A V V
Sbjct: 2 KREMNDEGEGPQDQKRNRRSEETV--RILIPSSIAGAVIGKGGQHIQKMRTQYKATVSVD 59
Query: 74 DPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDND 133
D +R + I + ++ ++ + +LK
Sbjct: 60 D--SQGPERTIQISADIESTLEIITE---------------MLKYF-------------- 88
Query: 134 KKRKEKEECQILVPSSQSANIIGKAGATIKRLRSK 168
++R E + ++L+ S + +IGK G IK +R +
Sbjct: 89 EERDEDFDVRLLIHQSLAGCVIGKGGQKIKEIRDR 123
Score = 39.7 bits (91), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 53/110 (48%), Gaps = 14/110 (12%)
Query: 131 DNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAME 190
D + R+ +E +IL+PSS + +IGK G I+++R++ + ++ V D+ P + +
Sbjct: 14 DQKRNRRSEETVRILIPSSIAGAVIGKGGQHIQKMRTQYKATVSV--DDSQGPERTIQIS 71
Query: 191 FDNFVLISGESEAVKKALFAISAIMYKFSPR-EDIPLETTVREAPPSIII 239
D ++ L I+ ++ F R ED + + ++ +I
Sbjct: 72 AD-----------IESTLEIITEMLKYFEERDEDFDVRLLIHQSLAGCVI 110
>gi|193083112|ref|NP_001122385.1| poly(rC)-binding protein 2 isoform f [Homo sapiens]
gi|66911068|gb|AAH97410.1| Pcbp2 protein [Rattus norvegicus]
gi|78395095|gb|AAI07689.1| PCBP2 protein [Homo sapiens]
gi|417399138|gb|JAA46599.1| Putative polyc-binding alphacp-1 [Desmodus rotundus]
Length = 335
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 161/342 (47%), Gaps = 44/342 (12%)
Query: 297 SGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVIT 356
+G++ + L IR+L ++G +IGK G ++K +R+ SGA+I++ + N E +IT
Sbjct: 3 TGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIIT 60
Query: 357 VTAIESPDDIKSMAVEAVL-LLQTKINDEDDDT-------VTIRLLVSSKVIGCIIGKSG 408
+ P + A ++ L+ I+ ++ VT+RL+V + G +IGK G
Sbjct: 61 LAG---PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGG 117
Query: 409 SIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDR 468
I EIR+ T A V+++ P ++ + + + G S+ + + QI + + +
Sbjct: 118 CKIKEIRESTGAQVQVAGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLETL---- 170
Query: 469 DGSRNPPVGADHIYSSGTGISMPPLLPSIPPV---GPLGYD---QRADSGSGIGMLSSSS 522
S++PP G Y PS PV G Y Q A + L +
Sbjct: 171 --SQSPPKGVTIPYRPK---------PSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLA 219
Query: 523 LY-GYGSLSMGDSPYGSMSSYSSKL---YGGL---PPPLTLEVLVPANAVGKVIGKAGSN 575
+ + ++ G++ + + S S ++ + GL + E+ +P + +G +IG+ G+
Sbjct: 220 MQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQGAK 279
Query: 576 LANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLI 617
+ IR++SGA I++++ DR I+G+ A+ LI
Sbjct: 280 INEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLI 321
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 150/355 (42%), Gaps = 79/355 (22%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH 89
E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R++T
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIIT---- 60
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAV-----ANATDNDKKRKEKEECQI 144
L +A+ K A I + + ++ T++ + ++
Sbjct: 61 ------------------LAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRL 102
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAV 204
+VP+SQ ++IGK G IK +R T ++V T + + I+G +++
Sbjct: 103 VVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNST-------ERAITIAGIPQSI 155
Query: 205 KKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADP-ILPSRS 263
+ + I +M LET + P + IP Y P P++ P I
Sbjct: 156 IECVKQICVVM----------LETLSQSPPKGVTIP-----YRP---KPSSSPVIFAGGQ 197
Query: 264 VPSILGAARVPD-----LQGYADTGNTWPVY--STGLSLV-----------SGLVGASQ- 304
+I G +P L A + +P+ +TG S + +GL ++Q
Sbjct: 198 AYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQT 257
Query: 305 -SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
S EL I P + IG +IG+ G I IRQ SGAQI + + + + +T+T
Sbjct: 258 TSHELTI----PNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTIT 308
>gi|193848519|gb|ACF22709.1| hypothetical protein-2 [Brachypodium distachyon]
Length = 429
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 108/431 (25%), Positives = 181/431 (41%), Gaps = 74/431 (17%)
Query: 37 VIYRILCPDGVIGSVIGKSGKVINSIRQET---RARVKVVDPFP-GAKDRVVTIYSHVKD 92
V++R+L P + V+ +R+ T RV ++ +P A RV +
Sbjct: 38 VVFRLLLPRAFGDEDAMRLYAVVAPLRRHTAGLHVRVDALEGYPEDAASRVAVVLGPTSP 97
Query: 93 KEDVEVDDEFNDKEPL--CAAQDALLKV-------HAAIANAVANATDNDKKRKEKEECQ 143
VE + EPL AQ+AL+ V H +A A E C
Sbjct: 98 TRPVEASSS-SSGEPLQLSPAQEALVSVVDVGGVLHRVVARA-----------PEFVSCL 145
Query: 144 ILVPSSQSANIIGKAGATIKRLRSKTRTSIKVT--PKDASEPTHSCAMEFDNFVLISGES 201
+LV ++A + T++ + S+T ++VT + A+ HS + I+G+
Sbjct: 146 VLV---EAAGLEALGRGTLEAIASETNAELRVTSLAEGATPSVHSP----KEVIEITGDR 198
Query: 202 EAVKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIP---SDVPIYPPGGLYPNADPI 258
++KA+ A+S+ Y L T+V PS + P S+VP G L+
Sbjct: 199 TTIRKAIVALSS--YLQGDLHACSLTTSVTT--PSPMFPWKSSEVPEPNYGDLHSGVSTK 254
Query: 259 LPSRSVPSILGAARVP-DLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFN 317
+ +VP I P D+ G +T N +++ R+LC N
Sbjct: 255 CANINVPWI----DCPQDVAGNVETENL--------------------QQISFRLLCHVN 290
Query: 318 KIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVLLL 377
G +IGK G IK +GA IDV + E VIT++A+ESP S A+L +
Sbjct: 291 LAGGLIGKKGMIIKGFETETGASIDVGNPFSGCMERVITISALESPGK-HSKVQSAILCI 349
Query: 378 QTKINDEDDDTV------TIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRI-SKGDKP 430
++ + + + + + R+LV ++G G+II E+ K T A + I + D P
Sbjct: 350 FDRMEEVERNLMFGKPECSARVLVPKSQFSSLVGLGGAIIKEMVKSTGARIEILDEMDVP 409
Query: 431 KCADANDELVE 441
CA + +++
Sbjct: 410 ACASNCERVLQ 420
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 68/146 (46%), Gaps = 17/146 (11%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH 89
E N + + +R+LC + G +IGK G +I ET A + V +PF G +RV+TI +
Sbjct: 274 ETENLQQISFRLLCHVNLAGGLIGKKGMIIKGFETETGASIDVGNPFSGCMERVITISAL 333
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSS 149
+ +V Q A+L I + + N K + ++LVP S
Sbjct: 334 ESPGKHSKV-------------QSAIL----CIFDRMEEVERNLMFGKPECSARVLVPKS 376
Query: 150 QSANIIGKAGATIKRLRSKTRTSIKV 175
Q ++++G GA IK + T I++
Sbjct: 377 QFSSLVGLGGAIIKEMVKSTGARIEI 402
>gi|193083114|ref|NP_001122386.1| poly(rC)-binding protein 2 isoform g [Homo sapiens]
gi|73996231|ref|XP_857798.1| PREDICTED: poly(rC)-binding protein 2 isoform 15 [Canis lupus
familiaris]
gi|291389261|ref|XP_002711067.1| PREDICTED: poly(rC) binding protein 2-like isoform 4 [Oryctolagus
cuniculus]
gi|338726296|ref|XP_003365293.1| PREDICTED: poly(rC)-binding protein 2 [Equus caballus]
gi|426224374|ref|XP_004006346.1| PREDICTED: poly(rC)-binding protein 2 isoform 4 [Ovis aries]
gi|119617117|gb|EAW96711.1| poly(rC) binding protein 2, isoform CRA_f [Homo sapiens]
Length = 318
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 154/332 (46%), Gaps = 41/332 (12%)
Query: 297 SGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVIT 356
+G++ + L IR+L ++G +IGK G ++K +R+ SGA+I++ + N E +IT
Sbjct: 3 TGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIIT 60
Query: 357 VTAIESPDDIKSMAVEAVL-LLQTKINDEDDDT-------VTIRLLVSSKVIGCIIGKSG 408
+ P + A ++ L+ I+ ++ VT+RL+V + G +IGK G
Sbjct: 61 LAG---PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGG 117
Query: 409 SIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDR 468
I EIR+ T A V+++ P ++ + + + G S+ + + QI + + +
Sbjct: 118 CKIKEIRESTGAQVQVAGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLE------ 168
Query: 469 DGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGS 528
+PP G Y PS PV + +A + G + L
Sbjct: 169 ----SPPKGVTIPYRPK---------PSSSPV--IFAGGQAYTIQGQYAIPQPDLTKLHQ 213
Query: 529 LSMGDSPYGSMSSYSSKLYGGL---PPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGA 585
L+M S + M+ ++ GL + E+ +P + +G +IG+ G+ + IR++SGA
Sbjct: 214 LAMQQSHF-PMTHGNTGFSAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGA 272
Query: 586 TIEMSDSKSSRGDRVALISGTPEQKRAAENLI 617
I++++ DR I+G+ A+ LI
Sbjct: 273 QIKIANPVEGSTDRQVTITGSAASISLAQYLI 304
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 144/339 (42%), Gaps = 64/339 (18%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH 89
E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R++T
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIIT---- 60
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAV-----ANATDNDKKRKEKEECQI 144
L +A+ K A I + + ++ T++ + ++
Sbjct: 61 ------------------LAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRL 102
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAV 204
+VP+SQ ++IGK G IK +R T ++V T + + I+G +++
Sbjct: 103 VVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNST-------ERAITIAGIPQSI 155
Query: 205 KKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSV 264
+ + I +M + P+ T+ P PS P+ GG A I ++
Sbjct: 156 IECVKQICVVMLESPPKG-----VTIPYRPK----PSSSPVIFAGG---QAYTIQGQYAI 203
Query: 265 PSILGAARVPDL---QGYADTGNTWPVYSTGLSLVSGLVGASQ--SEELVIRVLCPFNKI 319
P PDL A + +P+ +GL ++Q S EL I P + I
Sbjct: 204 PQ-------PDLTKLHQLAMQQSHFPMTHGNTGFSAGLDASAQTTSHELTI----PNDLI 252
Query: 320 GRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
G +IG+ G I IRQ SGAQI + + + + +T+T
Sbjct: 253 GCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTIT 291
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 86/218 (39%), Gaps = 66/218 (30%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDV-DDTKDNRDE-------------- 352
+ +R++ P ++ G +IGKGG IK IR+++GAQ+ V D N E
Sbjct: 98 VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIE 157
Query: 353 CV--ITVTAIESP--------------------------------------DDIKSMAVE 372
CV I V +ESP + +A++
Sbjct: 158 CVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQ 217
Query: 373 AVLLLQTKIN-------DEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRIS 425
T N D T + L + + +IGCIIG+ G+ INEIR+ + A ++I+
Sbjct: 218 QSHFPMTHGNTGFSAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIA 277
Query: 426 KGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDD 463
+ D V + G S+ A I +RL +
Sbjct: 278 N----PVEGSTDRQVTITGSAASISLAQYLINVRLSSE 311
>gi|345796407|ref|XP_003434167.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 2
isoform 1 [Canis lupus familiaris]
Length = 488
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 140/322 (43%), Gaps = 62/322 (19%)
Query: 301 GASQSEEL--VIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
G+SQ+ ++ +R+L P +G +IGK G TIK+I + + +++D+ K+N VT
Sbjct: 117 GSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHR-KENSGAAEKPVT 175
Query: 359 AIESPDDIKSMAVEAVLLLQTKINDEDD--DTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
+P+ S A +L + K DE + + +++L + ++G +IGK G + +I
Sbjct: 176 IHATPEGT-SEACRMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEH 234
Query: 417 RTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPV 476
T + IS + + + V G V + +A V+I+ +LR+ D
Sbjct: 235 ETGTKITISSLQDLSIYNP-ERTITVKGTVEACANAEVEIMKKLREAFEND--------- 284
Query: 477 GADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPY 536
ML+ ++ GY S +
Sbjct: 285 ----------------------------------------MLAVNTHSGYFSSLYPPHQF 304
Query: 537 GSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS-S 595
G + S P + + +P AVG +IGK G+++ + + +GA+I+++ ++
Sbjct: 305 GPFPHHHS-----YPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPD 359
Query: 596 RGDRVALISGTPEQKRAAENLI 617
+R+ +I+G PE + A+ I
Sbjct: 360 VSERMVIITGPPEAQFKAQGRI 381
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 101/218 (46%), Gaps = 23/218 (10%)
Query: 27 EKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKV---VDPFPGAKDRV 83
E DE E + +IL +G++G +IGK G+ + I ET ++ + D +R
Sbjct: 197 EADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERT 256
Query: 84 VTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKV--HAAIANAVANATD-----NDKKR 136
+T+ V+ + EV+ +E A ++ +L V H+ +++ +
Sbjct: 257 ITVKGTVEACANAEVEIMKKLRE---AFENDMLAVNTHSGYFSSLYPPHQFGPFPHHHSY 313
Query: 137 KEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVL 196
E+E + +P+ IIGK GA IK+L SIK+ P + + + + V+
Sbjct: 314 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVS-------ERMVI 366
Query: 197 ISGESEAVKKALFAISAIMYK---FSPREDIPLETTVR 231
I+G EA KA I + + F+P+E++ LE +R
Sbjct: 367 ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIR 404
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 81/357 (22%), Positives = 145/357 (40%), Gaps = 62/357 (17%)
Query: 142 CQILVPSSQSANIIGKAGATIKRLRSKTRT-----------------SIKVTPKDASEPT 184
+ILVP+ IIGK G TIK + +T++ +I TP+ SE
Sbjct: 128 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTSE-- 185
Query: 185 HSCAMEFDNFVLISGESEAVKKA------LFAISAIMYKFSPREDIPLETTVREAPPSII 238
+C M + ++ E++ K A + A + ++ + +E L+ E I
Sbjct: 186 -ACRMILE---IMQKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKIT 241
Query: 239 IPS--DVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQGYADT-GNTWPVYSTGLSL 295
I S D+ IY N + + + A V ++ + N +T
Sbjct: 242 ISSLQDLSIY-------NPERTITVKGTVEACANAEVEIMKKLREAFENDMLAVNTHSGY 294
Query: 296 VSGLVGASQS----------EELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDD 345
S L Q E+ ++ + P +G +IGK G IK + + +GA I +
Sbjct: 295 FSSLYPPHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAP 354
Query: 346 TK--DNRDECVITVTAIESPDDIKSMA---VEAVLLLQTKINDEDDDTVTIRLLVSSKVI 400
+ D + VI I P + + A + L + N +++ + + V S
Sbjct: 355 AEGPDVSERMVI----ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTA 410
Query: 401 GCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDE-LVEVVGEVGSVRDALVQI 456
G +IGK G +NE++ T A+V + + P D N+E +V ++G + + A +I
Sbjct: 411 GRVIGKGGKTVNELQNLTSAEVIVPRDQTP---DENEEVIVRIIGHFFASQTAQRKI 464
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 58/148 (39%), Gaps = 24/148 (16%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPF-PGAKDRVVTIYSHVKDK 93
E I + P +G++IGK G I + + A +K+ P +R+V I
Sbjct: 315 EQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII------- 367
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
+A K I + + K + K E I VPSS +
Sbjct: 368 ---------------TGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGR 412
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+IGK G T+ L++ T + + P+D +
Sbjct: 413 VIGKGGKTVNELQNLTSAEV-IVPRDQT 439
>gi|195029383|ref|XP_001987553.1| GH21981 [Drosophila grimshawi]
gi|193903553|gb|EDW02420.1| GH21981 [Drosophila grimshawi]
Length = 512
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 88/177 (49%), Gaps = 12/177 (6%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
E ++R+L P + G VIGKGG I+ +R A + VDD++ E I ++A DI
Sbjct: 21 EDMVRILIPSSIAGAVIGKGGQHIQKMRTQYKATVSVDDSQG--PERTIQISA-----DI 73
Query: 367 KSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISK 426
S ++ K +E DD +RLL+ + GC+IGK G I EIR R R K
Sbjct: 74 DSTL--EIITEMLKYFEERDDEFDVRLLIHQSLAGCVIGKGGQKIKEIRDRIGC--RFLK 129
Query: 427 GDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYS 483
+ D +V+ VG+ V DA+ ++I RD +K + + P+ D +Y+
Sbjct: 130 VFSNVAPQSTDRVVQTVGKQTQVIDAVREVITLTRDTPIKGPIHNYD-PMNFDRVYA 185
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 55/122 (45%), Gaps = 28/122 (22%)
Query: 14 NDRDGKNQKRRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV 73
ND DG ++R + NE+ V RIL P + G+VIGK G+ I +R + +A V V
Sbjct: 6 NDGDGPQDQKR-----NRRNEDMV--RILIPSSIAGAVIGKGGQHIQKMRTQYKATVSVD 58
Query: 74 DPFPGAKDRVVTIYSHVKDKEDV---------EVDDEFNDKEPLCAAQDALLKVHAAIAN 124
D +R + I + + ++ E DDEF D L +H ++A
Sbjct: 59 D--SQGPERTIQISADIDSTLEIITEMLKYFEERDDEF----------DVRLLIHQSLAG 106
Query: 125 AV 126
V
Sbjct: 107 CV 108
Score = 39.3 bits (90), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 46/93 (49%), Gaps = 13/93 (13%)
Query: 131 DNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAME 190
D + R+ ++ +IL+PSS + +IGK G I+++R++ + ++ V E T + +
Sbjct: 13 DQKRNRRNEDMVRILIPSSIAGAVIGKGGQHIQKMRTQYKATVSVDDSQGPERTIQISAD 72
Query: 191 FDNFVLISGESEAVKKALFAISAIMYKFSPRED 223
D+ + I I+ ++ F R+D
Sbjct: 73 IDSTLEI-------------ITEMLKYFEERDD 92
>gi|14141168|ref|NP_005007.2| poly(rC)-binding protein 2 isoform a [Homo sapiens]
gi|47940610|gb|AAH71942.1| Poly(rC) binding protein 2 [Homo sapiens]
gi|119617115|gb|EAW96709.1| poly(rC) binding protein 2, isoform CRA_d [Homo sapiens]
Length = 366
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 86/358 (24%), Positives = 167/358 (46%), Gaps = 45/358 (12%)
Query: 297 SGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVIT 356
+G++ + L IR+L ++G +IGK G ++K +R+ SGA+I++ + N E +IT
Sbjct: 3 TGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIIT 60
Query: 357 VTAIESPDDIKSMAVEAVL-LLQTKINDEDDDT-------VTIRLLVSSKVIGCIIGKSG 408
+ P + A ++ L+ I+ ++ VT+RL+V + G +IGK G
Sbjct: 61 LAG---PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGG 117
Query: 409 SIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDD----- 463
I EIR+ T A V+++ P ++ + + + G S+ + + QI + + +
Sbjct: 118 CKIKEIRESTGAQVQVAGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLETLSQSP 174
Query: 464 ----ALKDRDGSRNPPV---GADHIYSSGT-GISMPPLLPSI--------PPVGPLGYD- 506
+ R + PV G YS+G+ S P PS+ PP+
Sbjct: 175 PKGVTIPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQG 234
Query: 507 QRADSGSGIGMLSSSSLY-GYGSLSMGDSPYGSMSSYSSKL---YGGL---PPPLTLEVL 559
Q A + L ++ + ++ G++ + + S S ++ + GL + E+
Sbjct: 235 QYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELT 294
Query: 560 VPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLI 617
+P + +G +IG+ G+ + IR++SGA I++++ DR I+G+ A+ LI
Sbjct: 295 IPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLI 352
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 86/378 (22%), Positives = 154/378 (40%), Gaps = 94/378 (24%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH 89
E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R++T
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIIT---- 60
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAV-----ANATDNDKKRKEKEECQI 144
L +A+ K A I + + ++ T++ + ++
Sbjct: 61 ------------------LAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRL 102
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAV 204
+VP+SQ ++IGK G IK +R T ++V T + + I+G +++
Sbjct: 103 VVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNST-------ERAITIAGIPQSI 155
Query: 205 KKALFAISAIMYKFSPREDIPLETTVREAPPSIII-----PSDVPIYPPGGL-------- 251
+ + I +M LET + P + I PS P+ GG
Sbjct: 156 IECVKQICVVM----------LETLSQSPPKGVTIPYRPKPSSSPVIFAGGQDRYSTGSD 205
Query: 252 ---YPNADPIL--------PSRSVPSILGAARVPD-----LQGYADTGNTWPVY--STGL 293
+P+ P + P +I G +P L A + +P+ +TG
Sbjct: 206 SASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGF 265
Query: 294 SLV-----------SGLVGASQ--SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQ 340
S + +GL ++Q S EL I P + IG +IG+ G I IRQ SGAQ
Sbjct: 266 SGIESSSPEVKGYWAGLDASAQTTSHELTI----PNDLIGCIIGRQGAKINEIRQMSGAQ 321
Query: 341 IDVDDTKDNRDECVITVT 358
I + + + + +T+T
Sbjct: 322 IKIANPVEGSTDRQVTIT 339
>gi|297262518|ref|XP_001105618.2| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Macaca mulatta]
Length = 335
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 85/342 (24%), Positives = 161/342 (47%), Gaps = 44/342 (12%)
Query: 297 SGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVIT 356
+G++ + L IR+L ++G +IGK G ++K +R+ SGA+I++ + N E +IT
Sbjct: 3 TGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIIT 60
Query: 357 VTAIESPDD--IKSMAVEAVLLLQTKINDEDDDT------VTIRLLVSSKVIGCIIGKSG 408
+ P + K+ A+ L + + + T VT+RL+V + G +IGK G
Sbjct: 61 LAG---PTNAIFKAFAMIIDKLEEVFSSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGG 117
Query: 409 SIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDR 468
I EIR+ T A V+++ P ++ + + + G S+ + + QI + + +
Sbjct: 118 CKIKEIRESTGAQVQVAGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLETL---- 170
Query: 469 DGSRNPPVGADHIYSSGTGISMPPLLPSIPPV---GPLGYD---QRADSGSGIGMLSSSS 522
S++PP G Y PS PV G Y Q A + L +
Sbjct: 171 --SQSPPKGVTIPYRPK---------PSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLA 219
Query: 523 LY-GYGSLSMGDSPYGSMSSYSSKL---YGGL---PPPLTLEVLVPANAVGKVIGKAGSN 575
+ + ++ G++ + + S S ++ + GL + E+ +P + +G +IG+ G+
Sbjct: 220 MQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQGAK 279
Query: 576 LANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLI 617
+ IR++SGA I++++ DR I+G+ A+ LI
Sbjct: 280 INEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLI 321
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 150/355 (42%), Gaps = 79/355 (22%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH 89
E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R++T
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIIT---- 60
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAV-----ANATDNDKKRKEKEECQI 144
L +A+ K A I + + ++ T++ + ++
Sbjct: 61 ------------------LAGPTNAIFKAFAMIIDKLEEVFSSSMTNSTAASRPPVTLRL 102
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAV 204
+VP+SQ ++IGK G IK +R T ++V T + + I+G +++
Sbjct: 103 VVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNST-------ERAITIAGIPQSI 155
Query: 205 KKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADP-ILPSRS 263
+ + I +M LET + P + IP Y P P++ P I
Sbjct: 156 IECVKQICVVM----------LETLSQSPPKGVTIP-----YRP---KPSSSPVIFAGGQ 197
Query: 264 VPSILGAARVPD-----LQGYADTGNTWPVY--STGLSLV-----------SGLVGASQ- 304
+I G +P L A + +P+ +TG S + +GL ++Q
Sbjct: 198 AYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQT 257
Query: 305 -SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
S EL I P + IG +IG+ G I IRQ SGAQI + + + + +T+T
Sbjct: 258 TSHELTI----PNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTIT 308
>gi|390347463|ref|XP_792931.3| PREDICTED: poly(rC)-binding protein 3-like [Strongylocentrotus
purpuratus]
Length = 369
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 118/249 (47%), Gaps = 35/249 (14%)
Query: 389 VTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGS 448
V++RL+V + G +IGK GS I +IR+ T A + ++ P + + V + G +
Sbjct: 18 VSLRLIVPTSQCGSLIGKGGSKIKDIRETTSASITVASEMLP---SSTERAVTISGTPEA 74
Query: 449 VRDALVQIILRLRDDALKDRDGSRNP-PVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQ 507
+ A+ Q+ + + K P P A I++ G+ +SM + Q
Sbjct: 75 ITKAIYQVCCVMLESPPKGATIPYRPKPATAPIIFAGGS-VSM---------TEQHLHQQ 124
Query: 508 RADSGSGIGMLSS---SSLYGYGSLSMGDSPYG----------SMSSYSSKLYGGLPPP- 553
+A + G L+ + L+ +L +PY +++ ++++ PPP
Sbjct: 125 QAYAVHGNYALAQPDLTKLHHQLALHHQQTPYAIPGQTPFSPAALTQFAAQTAA--PPPQ 182
Query: 554 -----LTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPE 608
T E+ +P + +G VIG+ G+ + IR++SGA I++++S+ DR I+G+PE
Sbjct: 183 VQGQATTQEITIPNHLIGCVIGRGGTKIQEIRQMSGANIKIANSQEGSTDRSVTITGSPE 242
Query: 609 QKRAAENLI 617
A+ LI
Sbjct: 243 SVAVAQCLI 251
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 108/244 (44%), Gaps = 40/244 (16%)
Query: 143 QILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESE 202
+++VP+SQ ++IGK G+ IK +R T SI V ASE S + V ISG E
Sbjct: 21 RLIVPTSQCGSLIGKGGSKIKDIRETTSASITV----ASEMLPSST---ERAVTISGTPE 73
Query: 203 AVKKALFAISAIMYKFSPR-EDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPS 261
A+ KA++ + +M + P+ IP P+ PI GG + L
Sbjct: 74 AITKAIYQVCCVMLESPPKGATIPYRPK----------PATAPIIFAGGSVSMTEQHLHQ 123
Query: 262 RSVPSILG--AARVPDLQG-------------YADTGNTWPVYSTGLSLVSGLVGAS--- 303
+ ++ G A PDL YA G T P L+ + A
Sbjct: 124 QQAYAVHGNYALAQPDLTKLHHQLALHHQQTPYAIPGQT-PFSPAALTQFAAQTAAPPPQ 182
Query: 304 -QSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIES 362
Q + + P + IG VIG+GG I+ IRQ SGA I + ++++ + +T+T S
Sbjct: 183 VQGQATTQEITIPNHLIGCVIGRGGTKIQEIRQMSGANIKIANSQEGSTDRSVTITG--S 240
Query: 363 PDDI 366
P+ +
Sbjct: 241 PESV 244
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 42/67 (62%), Gaps = 2/67 (2%)
Query: 544 SKLYGGLP-PPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEM-SDSKSSRGDRVA 601
S L G P PP++L ++VP + G +IGK GS + +IR+ + A+I + S+ S +R
Sbjct: 7 SVLSPGTPKPPVSLRLIVPTSQCGSLIGKGGSKIKDIRETTSASITVASEMLPSSTERAV 66
Query: 602 LISGTPE 608
ISGTPE
Sbjct: 67 TISGTPE 73
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 30/52 (57%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTI 86
++ I P+ +IG VIG+ G I IRQ + A +K+ + G+ DR VTI
Sbjct: 186 QATTQEITIPNHLIGCVIGRGGTKIQEIRQMSGANIKIANSQEGSTDRSVTI 237
>gi|224131210|ref|XP_002328482.1| predicted protein [Populus trichocarpa]
gi|222838197|gb|EEE76562.1| predicted protein [Populus trichocarpa]
Length = 346
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 133/302 (44%), Gaps = 46/302 (15%)
Query: 357 VTAIESPDDIKSMAVEAVLLLQTKIND--EDDDT---------VTIRLLVSSKVIGCIIG 405
V+A E PD A++ +L + +I D E D + V+ RLLV + G +IG
Sbjct: 2 VSAKEEPDSSLPPAMDGLLRVHKRIIDGLEGDSSHAPPSSGAKVSTRLLVPASQAGSLIG 61
Query: 406 KSGSIINEIRKRTKADVRI-SKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDA 464
K G + I++ + VR+ D P + +D +VEV+GE V A+ I +LR
Sbjct: 62 KQGGTVKSIQEASACIVRVLGAEDLPVFSLQDDRVVEVLGEAVGVHKAVELIASQLRK-F 120
Query: 465 LKDRD---------GSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQR------- 508
L DR NPP+ + S G P LP + PVG GY Q
Sbjct: 121 LVDRSIIPLFEMQMQMANPPMEQMPPHQSWGG---PQSLP-LNPVGGPGYGQNPQYMQPP 176
Query: 509 ---------ADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVL 559
+D + + YG +P G +S +++ + +T ++
Sbjct: 177 RQHDNYYPPSDMPPPMEKQPHQGISAYGR----QTPMGGHASSNAQAAPSMITQITQQMQ 232
Query: 560 VPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQA 619
+P + VIG AG++++ IR+ SGAT+ + +++ ISGT Q + A+ LIQA
Sbjct: 233 IPLSYADAVIGTAGASISYIRRASGATVTIQETRGVPEAMTVEISGTASQVQTAQQLIQA 292
Query: 620 FI 621
Sbjct: 293 IF 294
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 128/288 (44%), Gaps = 25/288 (8%)
Query: 108 LCAAQDALLKVHAAIANAV-ANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLR 166
L A D LL+VH I + + +++ K ++LVP+SQ+ ++IGK G T+K ++
Sbjct: 12 LPPAMDGLLRVHKRIIDGLEGDSSHAPPSSGAKVSTRLLVPASQAGSLIGKQGGTVKSIQ 71
Query: 167 SKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKF-SPREDIP 225
+ ++V +E +++ D V + GE+ V KA+ I++ + KF R IP
Sbjct: 72 EASACIVRVL---GAEDLPVFSLQDDRVVEVLGEAVGVHKAVELIASQLRKFLVDRSIIP 128
Query: 226 L--------ETTVREAPP--SIIIPSDVPIYPPGGLYPNADP--ILPSRSVPSILGAARV 273
L + + PP S P +P+ P GG +P + P R + + +
Sbjct: 129 LFEMQMQMANPPMEQMPPHQSWGGPQSLPLNPVGGPGYGQNPQYMQPPRQHDNYYPPSDM 188
Query: 274 P------DLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGG 327
P QG + G P+ G + + S ++ ++ P + VIG G
Sbjct: 189 PPPMEKQPHQGISAYGRQTPM--GGHASSNAQAAPSMITQITQQMQIPLSYADAVIGTAG 246
Query: 328 GTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVL 375
+I IR+ASGA + + +T+ + + ++ S ++A+
Sbjct: 247 ASISYIRRASGATVTIQETRGVPEAMTVEISGTASQVQTAQQLIQAIF 294
>gi|6006748|gb|AAF00596.1|AF142631_1 hnRNP K protein homolog [Drosophila melanogaster]
Length = 490
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 88/177 (49%), Gaps = 12/177 (6%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
E +R+L P + G VIGKGG I+ +R A + VDD++ E I ++A DI
Sbjct: 22 EETVRILIPSSIAGAVIGKGGQHIQKMRTQYKATVSVDDSQG--PERTIQISA-----DI 74
Query: 367 KSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISK 426
+S ++ K +E D+ +RLL+ + GC+IGK G I EIR R R K
Sbjct: 75 ESTL--EIITEMLKYFEERDEDFDVRLLIHQSLAGCVIGKGGQKIKEIRDRIGC--RFLK 130
Query: 427 GDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYS 483
+ D +V+ VG+ V +A+ ++I RD +K + + P+ D +Y+
Sbjct: 131 VFSNVAPQSTDRVVQTVGKQSQVIEAVREVITLTRDTPIKGAIHNYD-PMNFDRVYA 186
Score = 42.7 bits (99), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 33/143 (23%)
Query: 26 NEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVT 85
++K + NEE+V RIL P + G+VIGK G+ I +R + +A V V D +R +
Sbjct: 14 DQKRNRRNEETV--RILIPSSIAGAVIGKGGQHIQKMRTQYKATVSVDD--SQGPERTIQ 69
Query: 86 IYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQIL 145
I + ++ ++ + +LK ++R E + ++L
Sbjct: 70 ISADIESTLEIITE---------------MLKYF--------------EERDEDFDVRLL 100
Query: 146 VPSSQSANIIGKAGATIKRLRSK 168
+ S + +IGK G IK +R +
Sbjct: 101 IHQSLAGCVIGKGGQKIKEIRDR 123
Score = 39.7 bits (91), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 53/110 (48%), Gaps = 14/110 (12%)
Query: 131 DNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAME 190
D + R+ +E +IL+PSS + +IGK G I+++R++ + ++ V D+ P + +
Sbjct: 14 DQKRNRRNEETVRILIPSSIAGAVIGKGGQHIQKMRTQYKATVSV--DDSQGPERTIQIS 71
Query: 191 FDNFVLISGESEAVKKALFAISAIMYKFSPR-EDIPLETTVREAPPSIII 239
D ++ L I+ ++ F R ED + + ++ +I
Sbjct: 72 AD-----------IESTLEIITEMLKYFEERDEDFDVRLLIHQSLAGCVI 110
>gi|148672030|gb|EDL03977.1| poly(rC) binding protein 2, isoform CRA_d [Mus musculus]
Length = 316
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 157/335 (46%), Gaps = 49/335 (14%)
Query: 297 SGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVIT 356
+G++ + L IR+L ++G +IGK G ++K +R+ SGA+I++ + N E +IT
Sbjct: 3 TGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIIT 60
Query: 357 VTAIESPDDIKSMAVEAVL-LLQTKINDEDDDT-------VTIRLLVSSKVIGCIIGKSG 408
+ P + A ++ L+ I+ ++ VT+RL+V + G +IGK G
Sbjct: 61 LAG---PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGG 117
Query: 409 SIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDR 468
I EIR+ T A V+++ P ++ + + + G S+ + + QI + + +
Sbjct: 118 CKIKEIRESTGAQVQVAGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLE------ 168
Query: 469 DGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLY-GYG 527
+PP G Y PS PV +G + L ++ +
Sbjct: 169 ----SPPKGVTIPYRPK---------PSSSPV--------IFAGGQLTKLHQLAMQQSHF 207
Query: 528 SLSMGDSPYGSMSSYSSKL--YGGL---PPPLTLEVLVPANAVGKVIGKAGSNLANIRKI 582
++ G++ + + S S ++ Y GL + E+ +P + +G +IG+ G+ + IR++
Sbjct: 208 PMTHGNTGFSGIESSSPEVKGYWGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQM 267
Query: 583 SGATIEMSDSKSSRGDRVALISGTPEQKRAAENLI 617
SGA I++++ DR I+G+ A+ LI
Sbjct: 268 SGAQIKIANPVEGSTDRQVTITGSAASISLAQYLI 302
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 143/345 (41%), Gaps = 76/345 (22%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH 89
E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R++T
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIIT---- 60
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAV-----ANATDNDKKRKEKEECQI 144
L +A+ K A I + + ++ T++ + ++
Sbjct: 61 ------------------LAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRL 102
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAV 204
+VP+SQ ++IGK G IK +R T ++V T + + I+G +++
Sbjct: 103 VVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNST-------ERAITIAGIPQSI 155
Query: 205 KKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRS- 263
+ + I +M + P+ T+ P PS P+ GG + +S
Sbjct: 156 IECVKQICVVMLESPPK-----GVTIPYRPK----PSSSPVIFAGGQLTKLHQLAMQQSH 206
Query: 264 VPSILG-------AARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQ--SEELVIRVLC 314
P G + P+++GY W GL ++Q S EL I
Sbjct: 207 FPMTHGNTGFSGIESSSPEVKGY------W-----------GLDASAQTTSHELTI---- 245
Query: 315 PFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTA 359
P + IG +IG+ G I IRQ SGAQI + + + + +T+T
Sbjct: 246 PNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITG 290
>gi|453080702|gb|EMF08752.1| hypothetical protein SEPMUDRAFT_151698 [Mycosphaerella populorum
SO2202]
Length = 518
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 90/368 (24%), Positives = 157/368 (42%), Gaps = 68/368 (18%)
Query: 304 QSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESP 363
+S+ L +R + + VIGKGG + IR+ +GA+ V + E V+TV+
Sbjct: 148 ESQWLHVRAIISSAEAATVIGKGGENVSQIRKLAGAKCTVSEYTRGAVERVLTVSG---- 203
Query: 364 DDIKSMAVEAVLLLQTKINDE--------DDDTVTIRLLVSSKVIGCIIGKSGSIINEIR 415
+ ++A L+++T +N E T +RLL+ +IG IIGK G I EI+
Sbjct: 204 -QVDAVAKAFGLIIRT-LNQEPLEEPSTPQSKTYPLRLLIPHILIGSIIGKQGVRIREIQ 261
Query: 416 KRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPP 475
+ + A + S+ P + + LV V+G +V A + L + L DR G P
Sbjct: 262 EASGARLNASESCLPLSTERS--LV-VLGVADAVHIATYYVGSTLVEQ-LTDRFGG---P 314
Query: 476 VGAD----HIYSSGTGISMPPLLPSIP-----------------------PVGPLG---- 504
++ H G ++P +P P P G
Sbjct: 315 AASNYAGRHGGPQGVVPGGMQVVPYVPQNTGGQVGQPDNNRRHNGPPSRGPPVPYGAPSM 374
Query: 505 -----YDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLP-------- 551
Y Q+ + G S + Y G+ PYG + + G P
Sbjct: 375 HGQSPYPQQPVAPVHYGAGSPRAPYA-GAGPHQAHPYGHAAPQPGPGHAGPPQQPVQGVG 433
Query: 552 --PPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQ 609
P+T ++ +P + VG +IGK G+ + IR++SG+ I++++ + + +R+ I+GT E
Sbjct: 434 PGQPITQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQDNNNERLVTITGTQEC 493
Query: 610 KRAAENLI 617
+ A ++
Sbjct: 494 NQMALYML 501
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
Query: 301 GASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAI 360
G + + ++ P + +G +IGKGG I IRQ SG+ I +++ +DN +E ++T+T
Sbjct: 431 GVGPGQPITQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQDNNNERLVTITGT 490
Query: 361 ESPDDIKSMAVEAVLLLQTKINDEDDDTVTI 391
+ + + A+ +L +++ + ++ +I
Sbjct: 491 QECNQM------ALYMLYSRLGESSKNSNSI 515
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 34/55 (61%)
Query: 32 GNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTI 86
G + + +I P+ ++G++IGK G IN IRQ + + +K+ +P +R+VTI
Sbjct: 433 GPGQPITQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQDNNNERLVTI 487
>gi|301759725|ref|XP_002915743.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 2 [Ailuropoda melanoleuca]
Length = 556
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 139/322 (43%), Gaps = 62/322 (19%)
Query: 301 GASQSEE--LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
G+SQ+ + +R+L P +G +IGK G TIK+I + + +++D+ K+N VT
Sbjct: 185 GSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDI-HRKENSGAAEKPVT 243
Query: 359 AIESPDDIKSMAVEAVLLLQTKINDEDD--DTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
+P+ S A +L + K DE + + +++L + ++G +IGK G + +I
Sbjct: 244 IHATPEGT-SEACRMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEH 302
Query: 417 RTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPV 476
T + IS + + + V G V + +A V+I+ +LR+ D
Sbjct: 303 ETGTKITISSLQDLSIYNP-ERTITVKGTVEACANAEVEIMKKLREAFEND--------- 352
Query: 477 GADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPY 536
ML+ ++ GY S +
Sbjct: 353 ----------------------------------------MLAVNTHSGYFSSLYPPHQF 372
Query: 537 GSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS-S 595
G + S P + + +P AVG +IGK G+++ + + +GA+I+++ ++
Sbjct: 373 GPFPHHHS-----YPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPD 427
Query: 596 RGDRVALISGTPEQKRAAENLI 617
+R+ +I+G PE + A+ I
Sbjct: 428 VSERMVIITGPPEAQFKAQGRI 449
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 101/218 (46%), Gaps = 23/218 (10%)
Query: 27 EKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKV---VDPFPGAKDRV 83
E DE E + +IL +G++G +IGK G+ + I ET ++ + D +R
Sbjct: 265 EADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERT 324
Query: 84 VTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKV--HAAIANAVANATD-----NDKKR 136
+T+ V+ + EV+ +E A ++ +L V H+ +++ +
Sbjct: 325 ITVKGTVEACANAEVEIMKKLRE---AFENDMLAVNTHSGYFSSLYPPHQFGPFPHHHSY 381
Query: 137 KEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVL 196
E+E + +P+ IIGK GA IK+L SIK+ P + + + + V+
Sbjct: 382 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVS-------ERMVI 434
Query: 197 ISGESEAVKKALFAISAIMYK---FSPREDIPLETTVR 231
I+G EA KA I + + F+P+E++ LE +R
Sbjct: 435 ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIR 472
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 81/357 (22%), Positives = 145/357 (40%), Gaps = 62/357 (17%)
Query: 142 CQILVPSSQSANIIGKAGATIKRLRSKTRT-----------------SIKVTPKDASEPT 184
+ILVP+ IIGK G TIK + +T++ +I TP+ SE
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTSE-- 253
Query: 185 HSCAMEFDNFVLISGESEAVKKA------LFAISAIMYKFSPREDIPLETTVREAPPSII 238
+C M + ++ E++ K A + A + ++ + +E L+ E I
Sbjct: 254 -ACRMILE---IMQKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKIT 309
Query: 239 IPS--DVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQGYADTG-NTWPVYSTGLSL 295
I S D+ IY N + + + A V ++ + N +T
Sbjct: 310 ISSLQDLSIY-------NPERTITVKGTVEACANAEVEIMKKLREAFENDMLAVNTHSGY 362
Query: 296 VSGLVGASQS----------EELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDD 345
S L Q E+ ++ + P +G +IGK G IK + + +GA I +
Sbjct: 363 FSSLYPPHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAP 422
Query: 346 TK--DNRDECVITVTAIESPDDIKSMA---VEAVLLLQTKINDEDDDTVTIRLLVSSKVI 400
+ D + VI I P + + A + L + N +++ + + V S
Sbjct: 423 AEGPDVSERMVI----ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTA 478
Query: 401 GCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDE-LVEVVGEVGSVRDALVQI 456
G +IGK G +NE++ T A+V + + P D N+E +V ++G + + A +I
Sbjct: 479 GRVIGKGGKTVNELQNLTSAEVIVPRDQTP---DENEEVIVRIIGHFFASQTAQRKI 532
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 58/148 (39%), Gaps = 24/148 (16%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPF-PGAKDRVVTIYSHVKDK 93
E I + P +G++IGK G I + + A +K+ P +R+V I
Sbjct: 383 EQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII------- 435
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
+A K I + + K + K E I VPSS +
Sbjct: 436 ---------------TGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGR 480
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+IGK G T+ L++ T + + P+D +
Sbjct: 481 VIGKGGKTVNELQNLTSAEV-IVPRDQT 507
>gi|328712758|ref|XP_003244898.1| PREDICTED: poly(rC)-binding protein 3-like [Acyrthosiphon pisum]
Length = 436
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 147/327 (44%), Gaps = 28/327 (8%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVIT--VTAIESPD 364
+ IR+L ++G VIG G T+K+IR SGA++ + + +I+ AI
Sbjct: 27 DFTIRILLNSREVGNVIGIRGETVKNIRSQSGARVLISNGSTPERIVIISGNTIAICRAT 86
Query: 365 DIKSMAVEAVLLLQTKINDE---DDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKAD 421
++ + VE ++N +T++L+V + G IIGK+GS I EIR ++A
Sbjct: 87 ELIGLKVEE---FSERLNGNWIGPKTPLTLKLIVPASQCGFIIGKNGSKIREIRDSSRAA 143
Query: 422 VRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHI 481
+ + P ++ + LV + G G++ + + L D + + P +
Sbjct: 144 ILVGSNMLP---NSTERLVSITGTTGTISHCVYLVCNVLLDSPPPNCESIAYHPCKEISV 200
Query: 482 YSSGTGISMPPLLPSIP--PVGPLGYDQRADSG---SGIGMLSSSSLYGYGSLSMGDSPY 536
+ + T I +IP + LG + G + + L+ S L L+ S
Sbjct: 201 FETCTVIKDLGTEHNIPLTNLAALGSGTATNGGINPAALTALAGSQLRASNRLNNNVSGQ 260
Query: 537 GSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSS- 595
+ +S + T + VP + +G +IG+ GS +A IR+ISGAT+ + S+ +
Sbjct: 261 QYDKNSNSDID-------TTTISVPDDLIGCIIGRRGSKIAKIRQISGATVHIFRSQGTI 313
Query: 596 ----RGDRVALISGTPEQKRAAENLIQ 618
+ DR I+G E A+ LI+
Sbjct: 314 ENREKVDRRITITGNKESVSVAKYLIE 340
>gi|378731796|gb|EHY58255.1| hypothetical protein HMPREF1120_06267 [Exophiala dermatitidis
NIH/UT8656]
Length = 492
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 154/366 (42%), Gaps = 66/366 (18%)
Query: 304 QSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESP 363
++ + IR + + IGKGG + IR+ SGA+ V D E ++TV+ +
Sbjct: 130 ETNWIHIRAVISSAEAATCIGKGGENVTQIRKLSGAKCTVSDYSRGAVERILTVSGSQ-- 187
Query: 364 DDIKSMAVEAVLLLQTKINDEDDD--------TVTIRLLVSSKVIGCIIGKSGSIINEIR 415
+A L+ +N+E D T +RLL+ +IG IIGKSG I EI+
Sbjct: 188 ----EAVSKAFGLIIRTLNNEPLDAPSTAQSKTYPLRLLIPHILIGSIIGKSGVRIREIQ 243
Query: 416 KRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPP 475
+ + A R++ D LV V+G +V A + + L + L +R G P
Sbjct: 244 EASGA--RLNASDSCLPLSTERSLV-VLGVADAVHIATYYVAVTLVEQ-LTERFGG---P 296
Query: 476 VGADHIYSSG-------TGISMPPLLPSIPPVGPLGY-----------DQRADSG----- 512
+ + SG G+ + P +P P G G+ QRA +
Sbjct: 297 AASAYATRSGGPAGVIPGGMQVVPYVPQ-PAGGQYGHPDTYKRHNTLPPQRAPAQPYGAP 355
Query: 513 --SGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPP------------------ 552
G + + + YG+ + YG +PP
Sbjct: 356 QVHGAAPQPYAPYPQPYAATPRTPSYGAAVPQPAGPYGQVPPQPVVPHGQPAQPAHGMPG 415
Query: 553 -PLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKR 611
P+T ++ +P + VG +IGK G+ + IR +SG+ I++++ + + +R+ I+GT E +
Sbjct: 416 QPITQQIFIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQDNSNERLVTITGTQECNQ 475
Query: 612 AAENLI 617
A ++
Sbjct: 476 MALYML 481
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 78/378 (20%), Positives = 155/378 (41%), Gaps = 79/378 (20%)
Query: 50 SVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLC 109
+ IGK G+ + IR+ + A+ V D GA +R++T+
Sbjct: 147 TCIGKGGENVTQIRKLSGAKCTVSDYSRGAVERILTV----------------------S 184
Query: 110 AAQDALLKVHAAIANAVAN-ATDNDKKRKEKE-ECQILVPSSQSANIIGKAGATIKRLRS 167
+Q+A+ K I + N D + K ++L+P +IIGK+G I+ ++
Sbjct: 185 GSQEAVSKAFGLIIRTLNNEPLDAPSTAQSKTYPLRLLIPHILIGSIIGKSGVRIREIQE 244
Query: 168 KTRTSIKVTPKDASEPTHSC-AMEFDNFVLISGESEAVKKALFAIS-AIMYKFSPREDIP 225
+ + +AS+ SC + + +++ G ++AV A + ++ ++ + + R P
Sbjct: 245 ASGARL-----NASD---SCLPLSTERSLVVLGVADAVHIATYYVAVTLVEQLTERFGGP 296
Query: 226 LETT--VREAPPSIIIPSDVPI-----YPPGGLYPNADPILPSRSVPSILGAAR---VPD 275
+ R P+ +IP + + P GG Y + D ++P A+ P
Sbjct: 297 AASAYATRSGGPAGVIPGGMQVVPYVPQPAGGQYGHPDTYKRHNTLPPQRAPAQPYGAPQ 356
Query: 276 LQGYADTGNT-----------WPVYSTGLSLVSGLVGASQSEELVI-------------- 310
+ G A P Y + +G G + +V
Sbjct: 357 VHGAAPQPYAPYPQPYAATPRTPSYGAAVPQPAGPYGQVPPQPVVPHGQPAQPAHGMPGQ 416
Query: 311 ----RVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
++ P + +G +IGKGG I IR SG+ I +++ +DN +E ++T+T + + +
Sbjct: 417 PITQQIFIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQDNSNERLVTITGTQECNQM 476
Query: 367 KSMAVEAVLLLQTKINDE 384
A+ +L +++ E
Sbjct: 477 ------ALYMLYSRLESE 488
Score = 39.7 bits (91), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 33/52 (63%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTI 86
+ + +I P+ ++G++IGK G IN IR + + +K+ +P + +R+VTI
Sbjct: 416 QPITQQIFIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQDNSNERLVTI 467
>gi|332215033|ref|XP_003256641.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 4 [Nomascus leucogenys]
gi|397470079|ref|XP_003806661.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 2 [Pan paniscus]
gi|179479950|gb|ACB86627.1| insulin-like 2 growth factor 2-binding protein 2 [Homo sapiens]
Length = 493
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/322 (22%), Positives = 137/322 (42%), Gaps = 62/322 (19%)
Query: 301 GASQSEE--LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
G SQ+ + +R+L P +G +IGK G TIK+I + + +++D+ K+N VT
Sbjct: 122 GTSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHR-KENSGAAEKPVT 180
Query: 359 AIESPDDIKSMAVEAVLLLQTKINDEDD--DTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
+P+ S A +L + K DE + + +++L + ++G +IGK G + +I
Sbjct: 181 IHATPEGT-SEACRMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEH 239
Query: 417 RTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPV 476
T + IS + + + V G V + A ++I+ +LR+ D
Sbjct: 240 ETGTKITISSLQDLSIYNP-ERTITVKGTVEACASAEIEIMKKLREAFEND--------- 289
Query: 477 GADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPY 536
ML+ ++ GY S +
Sbjct: 290 ----------------------------------------MLAVNTHSGYFSSLYPHHQF 309
Query: 537 GSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS-S 595
G + S P + + +P AVG +IGK G+++ + + +GA+I+++ ++
Sbjct: 310 GPFPHHHS-----YPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPD 364
Query: 596 RGDRVALISGTPEQKRAAENLI 617
+R+ +I+G PE + A+ I
Sbjct: 365 VSERMVIITGPPEAQFKAQGRI 386
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 101/223 (45%), Gaps = 33/223 (14%)
Query: 27 EKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARV--------KVVDPFPG 78
E DE E + +IL +G++G +IGK G+ + I ET ++ + +P
Sbjct: 202 EADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNP--- 258
Query: 79 AKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKV--HAAIANAVANATD----- 131
+R +T+ V+ E++ +E A ++ +L V H+ +++
Sbjct: 259 --ERTITVKGTVEACASAEIEIMKKLRE---AFENDMLAVNTHSGYFSSLYPHHQFGPFP 313
Query: 132 NDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEF 191
+ E+E + +P+ IIGK GA IK+L SIK+ P + + +
Sbjct: 314 HHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVS------- 366
Query: 192 DNFVLISGESEAVKKALFAISAIMYK---FSPREDIPLETTVR 231
+ V+I+G EA KA I + + F+P+E++ LE +R
Sbjct: 367 ERMVIITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIR 409
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 80/357 (22%), Positives = 146/357 (40%), Gaps = 62/357 (17%)
Query: 142 CQILVPSSQSANIIGKAGATIKRLRSKTRT-----------------SIKVTPKDASEPT 184
+ILVP+ IIGK G TIK + +T++ +I TP+ SE
Sbjct: 133 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTSE-- 190
Query: 185 HSCAMEFDNFVLISGESEAVKKA------LFAISAIMYKFSPREDIPLETTVREAPPSII 238
+C M + ++ E++ K A + A + ++ + +E L+ E I
Sbjct: 191 -ACRMILE---IMQKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKIT 246
Query: 239 IPS--DVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQGYADTG-NTWPVYSTGLSL 295
I S D+ IY N + + + +A + ++ + N +T
Sbjct: 247 ISSLQDLSIY-------NPERTITVKGTVEACASAEIEIMKKLREAFENDMLAVNTHSGY 299
Query: 296 VSGLVGASQS----------EELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDD 345
S L Q E+ ++ + P +G +IGK G IK + + +GA I +
Sbjct: 300 FSSLYPHHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAP 359
Query: 346 TK--DNRDECVITVTAIESPDDIKSMA---VEAVLLLQTKINDEDDDTVTIRLLVSSKVI 400
+ D + VI I P + + A + L + N +++ + + V S
Sbjct: 360 AEGPDVSERMVI----ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTA 415
Query: 401 GCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDE-LVEVVGEVGSVRDALVQI 456
G +IGK G +NE++ T A+V + + P D N+E +V ++G + + A +I
Sbjct: 416 GRVIGKGGKTVNELQNLTSAEVIVPRDQTP---DENEEVIVRIIGHFFASQTAQRKI 469
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 58/148 (39%), Gaps = 24/148 (16%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPF-PGAKDRVVTIYSHVKDK 93
E I + P +G++IGK G I + + A +K+ P +R+V I
Sbjct: 320 EQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII------- 372
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
+A K I + + K + K E I VPSS +
Sbjct: 373 ---------------TGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGR 417
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+IGK G T+ L++ T + + P+D +
Sbjct: 418 VIGKGGKTVNELQNLTSAEV-IVPRDQT 444
>gi|195585141|ref|XP_002082349.1| GD11524 [Drosophila simulans]
gi|194194358|gb|EDX07934.1| GD11524 [Drosophila simulans]
Length = 496
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 88/177 (49%), Gaps = 12/177 (6%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
E +R+L P + G VIGKGG I+ +R A + VDD++ E I ++A DI
Sbjct: 22 EETVRILIPSSIAGAVIGKGGQHIQKMRTQYKATVSVDDSQG--PERTIQISA-----DI 74
Query: 367 KSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISK 426
+S ++ K +E D+ +RLL+ + GC+IGK G I EIR R R K
Sbjct: 75 ESTL--EIITEMLKYFEERDEDFDVRLLIHQSLAGCVIGKGGQKIKEIRDRIGC--RFLK 130
Query: 427 GDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYS 483
+ D +V+ VG+ V +A+ ++I RD +K + + P+ D +Y+
Sbjct: 131 VFSNVAPQSTDRVVQTVGKQSQVIEAVREVITLTRDTPIKGAIHNYD-PMNFDRVYA 186
Score = 42.4 bits (98), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 33/143 (23%)
Query: 26 NEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVT 85
++K + NEE+V RIL P + G+VIGK G+ I +R + +A V V D +R +
Sbjct: 14 DQKRNRRNEETV--RILIPSSIAGAVIGKGGQHIQKMRTQYKATVSVDD--SQGPERTIQ 69
Query: 86 IYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQIL 145
I + ++ ++ + +LK ++R E + ++L
Sbjct: 70 ISADIESTLEIITE---------------MLKYF--------------EERDEDFDVRLL 100
Query: 146 VPSSQSANIIGKAGATIKRLRSK 168
+ S + +IGK G IK +R +
Sbjct: 101 IHQSLAGCVIGKGGQKIKEIRDR 123
Score = 39.7 bits (91), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 53/110 (48%), Gaps = 14/110 (12%)
Query: 131 DNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAME 190
D + R+ +E +IL+PSS + +IGK G I+++R++ + ++ V D+ P + +
Sbjct: 14 DQKRNRRNEETVRILIPSSIAGAVIGKGGQHIQKMRTQYKATVSV--DDSQGPERTIQIS 71
Query: 191 FDNFVLISGESEAVKKALFAISAIMYKFSPR-EDIPLETTVREAPPSIII 239
D ++ L I+ ++ F R ED + + ++ +I
Sbjct: 72 AD-----------IESTLEIITEMLKYFEERDEDFDVRLLIHQSLAGCVI 110
>gi|344283688|ref|XP_003413603.1| PREDICTED: poly(rC)-binding protein 1-like [Loxodonta africana]
Length = 438
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 151/344 (43%), Gaps = 50/344 (14%)
Query: 311 RVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMA 370
L P + +G+ G ++K IR+ SGA+I++ + N E +IT+T P + A
Sbjct: 99 HALWPPHAHEASLGRKGTSVKRIREESGARINISE--GNCPERIITLTG---PTNAIFKA 153
Query: 371 VEAVL-LLQTKINDEDDDT-------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADV 422
++ L+ IN ++ VT+RL+V + G +IGK G I EIR+ T A V
Sbjct: 154 FAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQV 213
Query: 423 RISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDG----------SR 472
+++ P ++ + + + G SV + + QI L + + + G
Sbjct: 214 QVAGDMLP---NSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPMPA 270
Query: 473 NPPV----GADHI-----YSSGTG-ISMPPL-------LPSIPPVGPLGYDQRADSGSGI 515
+ PV G D Y T + PPL +I P+ +Q A S
Sbjct: 271 SSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISPLDLAKLNQVARQQSHF 330
Query: 516 GMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSN 575
ML + G+ + DS + Y + L T E+ +P N +G +IG+ G+N
Sbjct: 331 AMLHGGT--GFAGI---DSSSPEVKGYWASLDAST--QTTHELTIPNNLIGCIIGRQGAN 383
Query: 576 LANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQA 619
+ IR++SGA I++++ R I+G+ A+ LI A
Sbjct: 384 INEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLINA 427
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 76/354 (21%), Positives = 137/354 (38%), Gaps = 79/354 (22%)
Query: 42 LCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDE 101
L P + +G+ G + IR+E+ AR+ + + +R++T
Sbjct: 101 LWPPHAHEASLGRKGTSVKRIREESGARINISEG--NCPERIIT---------------- 142
Query: 102 FNDKEPLCAAQDALLKVHAAIANAV-----ANATDNDKKRKEKEECQILVPSSQSANIIG 156
L +A+ K A I + + ++ T++ + +++VP++Q ++IG
Sbjct: 143 ------LTGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIG 196
Query: 157 KAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMY 216
K G IK +R T ++V T + + I+G ++V + + I +M
Sbjct: 197 KGGCKIKEIRESTGAQVQVAGDMLPNST-------ERAITIAGVPQSVTECVKQICLVML 249
Query: 217 KFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGL--------YPNADPIL--PSRSVPS 266
+ + T+ P +P+ P+ GG YP+A L P S
Sbjct: 250 ETLSQSPQGRVMTIPYQP----MPASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYS 305
Query: 267 ILGAARVPDL---------------------QGYADTGNTWPVYSTGLSLVSGLVGASQ- 304
I G + L G+A ++ P + L ++Q
Sbjct: 306 IQGQHTISPLDLAKLNQVARQQSHFAMLHGGTGFAGIDSSSPEVK---GYWASLDASTQT 362
Query: 305 SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
+ EL I P N IG +IG+ G I IRQ SGAQI + + + +T+T
Sbjct: 363 THELTI----PNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTIT 412
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 31/48 (64%)
Query: 39 YRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTI 86
+ + P+ +IG +IG+ G IN IRQ + A++K+ +P G+ R VTI
Sbjct: 364 HELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTI 411
>gi|281363839|ref|NP_001163216.1| bancal, isoform E [Drosophila melanogaster]
gi|272432584|gb|ACZ94488.1| bancal, isoform E [Drosophila melanogaster]
Length = 493
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 88/177 (49%), Gaps = 12/177 (6%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
E +R+L P + G VIGKGG I+ +R A + VDD++ E I ++A DI
Sbjct: 22 EETVRILIPSSIAGAVIGKGGQHIQKMRTQYKATVSVDDSQG--PERTIQISA-----DI 74
Query: 367 KSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISK 426
+S ++ K +E D+ +RLL+ + GC+IGK G I EIR R R K
Sbjct: 75 ESTL--EIITEMLKYFEERDEDFDVRLLIHQSLAGCVIGKGGQKIKEIRDRIGC--RFLK 130
Query: 427 GDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYS 483
+ D +V+ VG+ V +A+ ++I RD +K + + P+ D +Y+
Sbjct: 131 VFSNVAPQSTDRVVQTVGKQSQVIEAVREVITLTRDTPIKGAIHNYD-PMNFDRVYA 186
Score = 42.7 bits (99), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 33/143 (23%)
Query: 26 NEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVT 85
++K + NEE+V RIL P + G+VIGK G+ I +R + +A V V D +R +
Sbjct: 14 DQKRNRRNEETV--RILIPSSIAGAVIGKGGQHIQKMRTQYKATVSVDD--SQGPERTIQ 69
Query: 86 IYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQIL 145
I + ++ ++ + +LK ++R E + ++L
Sbjct: 70 ISADIESTLEIITE---------------MLKYF--------------EERDEDFDVRLL 100
Query: 146 VPSSQSANIIGKAGATIKRLRSK 168
+ S + +IGK G IK +R +
Sbjct: 101 IHQSLAGCVIGKGGQKIKEIRDR 123
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 53/110 (48%), Gaps = 14/110 (12%)
Query: 131 DNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAME 190
D + R+ +E +IL+PSS + +IGK G I+++R++ + ++ V D+ P + +
Sbjct: 14 DQKRNRRNEETVRILIPSSIAGAVIGKGGQHIQKMRTQYKATVSV--DDSQGPERTIQIS 71
Query: 191 FDNFVLISGESEAVKKALFAISAIMYKFSPR-EDIPLETTVREAPPSIII 239
D ++ L I+ ++ F R ED + + ++ +I
Sbjct: 72 AD-----------IESTLEIITEMLKYFEERDEDFDVRLLIHQSLAGCVI 110
>gi|395839827|ref|XP_003792777.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 2 [Otolemur garnettii]
Length = 554
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 145/326 (44%), Gaps = 62/326 (19%)
Query: 297 SGLVGASQSEE--LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECV 354
G G+SQ+ + +R+L P +G +IGK G TIK+I + + +++D+ K+N
Sbjct: 179 QGHGGSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDI-HRKENSGAAE 237
Query: 355 ITVTAIESPDDIKSMAVEAVLLLQTKINDEDD--DTVTIRLLVSSKVIGCIIGKSGSIIN 412
VT +P+ S A +L + K DE + + +++L + ++G +IGK G +
Sbjct: 238 KPVTIHATPEGT-SEACRMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLK 296
Query: 413 EIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSR 472
+I T + IS + + + V G V + +A ++I+ +LR+ D
Sbjct: 297 KIEHETGTKITISSLQDLSIYNP-ERTITVKGTVEACANAEIEIMKKLREAFEND----- 350
Query: 473 NPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMG 532
+ A + +S GY SSLY +
Sbjct: 351 ---MLAVNTHS--------------------GY--------------FSSLYPHHQF--- 370
Query: 533 DSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDS 592
SP+ SY P + + +P AVG +IGK G+++ + + +GA+I+++ +
Sbjct: 371 -SPFPHHHSY--------PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPA 421
Query: 593 KS-SRGDRVALISGTPEQKRAAENLI 617
+ +R+ +I+G PE + A+ I
Sbjct: 422 EGPDVSERMVIITGPPEAQFKAQGRI 447
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 101/218 (46%), Gaps = 23/218 (10%)
Query: 27 EKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKV---VDPFPGAKDRV 83
E DE E + +IL +G++G +IGK G+ + I ET ++ + D +R
Sbjct: 263 EADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERT 322
Query: 84 VTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKV--HAAIANAVANATD-----NDKKR 136
+T+ V+ + E++ +E A ++ +L V H+ +++ +
Sbjct: 323 ITVKGTVEACANAEIEIMKKLRE---AFENDMLAVNTHSGYFSSLYPHHQFSPFPHHHSY 379
Query: 137 KEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVL 196
E+E + +P+ IIGK GA IK+L SIK+ P + + + + V+
Sbjct: 380 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVS-------ERMVI 432
Query: 197 ISGESEAVKKALFAISAIMYK---FSPREDIPLETTVR 231
I+G EA KA I + + F+P+E++ LE +R
Sbjct: 433 ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIR 470
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 85/386 (22%), Positives = 154/386 (39%), Gaps = 80/386 (20%)
Query: 9 RSQRDNDRDGKNQKRRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRA 68
S R+ G +Q R+I+ RIL P +G++IGK G I +I ++T++
Sbjct: 174 HSSREQGHGGSSQARQID----------FPLRILVPTQFVGAIIGKEGLTIKNITKQTQS 223
Query: 69 RVKVV-DPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVA 127
RV + GA ++ VTI++ E A +L++ A
Sbjct: 224 RVDIHRKENSGAAEKPVTIHA---------------TPEGTSEACRMILEIMQKEA---- 264
Query: 128 NATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTP-KDAS--EPT 184
++ K E+ +IL + +IGK G +K++ +T T I ++ +D S P
Sbjct: 265 ----DETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPE 320
Query: 185 HSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIP-SDV 243
+ ++ + E E +KK A M L S + P
Sbjct: 321 RTITVKGTVEACANAEIEIMKKLREAFENDM----------LAVNTHSGYFSSLYPHHQF 370
Query: 244 PIYPPGGLYPNADPI---LPSRSVPSILG--AARVPDLQGYADTG-----NTWPVYSTGL 293
+P YP + + +P+++V +I+G A + L +A P S +
Sbjct: 371 SPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERM 430
Query: 294 SLVSG-----------LVGASQSE---------ELVIRVLCPFNKIGRVIGKGGGTIKSI 333
+++G + G + E +L + P + GRVIGKGG T+ +
Sbjct: 431 VIITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNEL 490
Query: 334 RQASGAQIDV--DDTKDNRDECVITV 357
+ + A++ V D T D +E ++ +
Sbjct: 491 QNLTSAEVIVPRDQTPDENEEVIVRI 516
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 80/357 (22%), Positives = 145/357 (40%), Gaps = 62/357 (17%)
Query: 142 CQILVPSSQSANIIGKAGATIKRLRSKTRT-----------------SIKVTPKDASEPT 184
+ILVP+ IIGK G TIK + +T++ +I TP+ SE
Sbjct: 194 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTSE-- 251
Query: 185 HSCAMEFDNFVLISGESEAVKKA------LFAISAIMYKFSPREDIPLETTVREAPPSII 238
+C M + ++ E++ K A + A + ++ + +E L+ E I
Sbjct: 252 -ACRMILE---IMQKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKIT 307
Query: 239 IPS--DVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQGYADTG-NTWPVYSTGLSL 295
I S D+ IY P + + + A + ++ + N +T
Sbjct: 308 ISSLQDLSIYNP-------ERTITVKGTVEACANAEIEIMKKLREAFENDMLAVNTHSGY 360
Query: 296 VSGLVGASQS----------EELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDD 345
S L Q E+ ++ + P +G +IGK G IK + + +GA I +
Sbjct: 361 FSSLYPHHQFSPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAP 420
Query: 346 TK--DNRDECVITVTAIESPDDIKSMA---VEAVLLLQTKINDEDDDTVTIRLLVSSKVI 400
+ D + VI I P + + A + L + N +++ + + V S
Sbjct: 421 AEGPDVSERMVI----ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTA 476
Query: 401 GCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDE-LVEVVGEVGSVRDALVQI 456
G +IGK G +NE++ T A+V + + P D N+E +V ++G + + A +I
Sbjct: 477 GRVIGKGGKTVNELQNLTSAEVIVPRDQTP---DENEEVIVRIIGHFFASQTAQRKI 530
>gi|328850348|gb|EGF99514.1| hypothetical protein MELLADRAFT_73383 [Melampsora larici-populina
98AG31]
Length = 383
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 156/351 (44%), Gaps = 26/351 (7%)
Query: 288 VYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTK 347
+ S GL + S GA + + +R L + G +IGKGG T+ IR+ +G + V
Sbjct: 17 IRSNGLPINSTGAGADPTSNVTLRSLVSTKEAGVIIGKGGKTVAEIREQTGTKAGVSKAV 76
Query: 348 DNRDECVITVT-AIESPDDIKSMAVEAVLLLQTKIND-------EDDDTVTIRLLVSSKV 399
+ V++V+ +E S+ +A+L D T IR+LVS +
Sbjct: 77 QGVHDRVLSVSGGLEGVSKAYSIVADAILQNPLAATDPSLTVPPPTATTTAIRVLVSHNL 136
Query: 400 IGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILR 459
+G IIG+ GS I EI+ + + SK P+ + + +VEV G ++R A+ +I
Sbjct: 137 MGSIIGRQGSKIKEIQDISGVRMVASKEMLPQ---STERVVEVQGSPEAIRVAIHEIGKC 193
Query: 460 LRDDALKDRDGSRNPP--VGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGM 517
L +D + P +G D + ++ G + G +RA SG G
Sbjct: 194 LMEDWERAHGTVLYQPGALGPDGVTAAYPGGVLAGGFGVGGQGYGNGGARRAGSGVPSGG 253
Query: 518 LSSSSLYGY----GSLSMGDSPYGSMSSYSSKLYGGLPPPL------TLEVLVPANAVGK 567
+ L G G+ + G S +S P P+ T + +PA+ VG
Sbjct: 254 HMAGDLPGRRPHNGTYHSNGNENGHRSRENS--LASAPAPVADRLLRTQNISIPADMVGC 311
Query: 568 VIGKAGSNLANIRKISGATIEMSDS-KSSRGDRVALISGTPEQKRAAENLI 617
+IGK G+ + IR++SG+ I ++ + G+R+ I+G+ E A L+
Sbjct: 312 IIGKGGAKINEIRRMSGSRISIAKTPHDDTGERMFTITGSSEANEKALFLL 362
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 83/381 (21%), Positives = 140/381 (36%), Gaps = 69/381 (18%)
Query: 36 SVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKED 95
+V R L G +IGK GK + IR++T + V G DRV+++
Sbjct: 36 NVTLRSLVSTKEAGVIIGKGGKTVAEIREQTGTKAGVSKAVQGVHDRVLSV--------- 86
Query: 96 VEVDDEFNDKEPLCAAQDALLKVHAAIANAVAN----ATD----NDKKRKEKEECQILVP 147
+ + K ++ +A+A+ ATD ++LV
Sbjct: 87 -------------SGGLEGVSKAYSIVADAILQNPLAATDPSLTVPPPTATTTAIRVLVS 133
Query: 148 SSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKA 207
+ +IIG+ G+ IK ++ + + + + + T + V + G EA++ A
Sbjct: 134 HNLMGSIIGRQGSKIKEIQDISGVRMVASKEMLPQST-------ERVVEVQGSPEAIRVA 186
Query: 208 LFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPIL-------- 259
+ I + ED P + P V PGG+ +
Sbjct: 187 IHEIGKCLM-----EDWERAHGTVLYQPGALGPDGVTAAYPGGVLAGGFGVGGQGYGNGG 241
Query: 260 ---PSRSVPSILGAARVPDLQG-------YADTGNTWPVYSTGLSLVSGLVGASQSEELV 309
VPS G DL G Y GN S SL S +
Sbjct: 242 ARRAGSGVPS--GGHMAGDLPGRRPHNGTYHSNGNENGHRSRENSLASAPAPVADRLLRT 299
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDT-KDNRDECVITVTAIESPDDIKS 368
+ P + +G +IGKGG I IR+ SG++I + T D+ E + T+T ++
Sbjct: 300 QNISIPADMVGCIIGKGGAKINEIRRMSGSRISIAKTPHDDTGERMFTITGSSEANE--- 356
Query: 369 MAVEAVLLLQTKINDEDDDTV 389
+A+ LL ++ E + V
Sbjct: 357 ---KALFLLYNQLESEKERRV 374
Score = 38.9 bits (89), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 360 IESPDDIKSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
+ SP D KS+ + + T + VT+R LVS+K G IIGK G + EIR++T
Sbjct: 9 LSSPPD-KSIRSNGLPINSTGAGADPTSNVTLRSLVSTKEAGVIIGKGGKTVAEIREQTG 67
Query: 420 ADVRISK 426
+SK
Sbjct: 68 TKAGVSK 74
>gi|147832545|emb|CAN68300.1| hypothetical protein VITISV_009906 [Vitis vinifera]
Length = 408
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 74/136 (54%), Gaps = 9/136 (6%)
Query: 382 NDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDK-PKCADANDELV 440
+ E+ + VT+RLLV S IGC+IGK G II IR + A +RI K D P C+ +++EL+
Sbjct: 276 DSEEANQVTVRLLVPSNQIGCVIGKGGQIIQSIRSESGAQIRILKDDHLPSCSLSSNELI 335
Query: 441 EVVGEVGSVRDALVQIILRLRDDALKDRD-GSRNPPVGADHIYSSGTGISM---PPLLPS 496
++ E VR L QI RL D+ + + P+G SSG+ + + P++
Sbjct: 336 QISREPFIVRKILYQIASRLHDNPSRSQHLFVYVVPIGYS---SSGSLMGLTSGAPIIGL 392
Query: 497 IPPVGPLGYDQRADSG 512
P VG G R DSG
Sbjct: 393 APLVGTYG-GYRGDSG 407
Score = 46.2 bits (108), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 31/42 (73%)
Query: 302 ASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDV 343
+ ++ ++ +R+L P N+IG VIGKGG I+SIR SGAQI +
Sbjct: 277 SEEANQVTVRLLVPSNQIGCVIGKGGQIIQSIRSESGAQIRI 318
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
Query: 133 DKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFD 192
D + + ++LVPS+Q +IGK G I+ +RS++ I++ KD P SC++ +
Sbjct: 276 DSEEANQVTVRLLVPSNQIGCVIGKGGQIIQSIRSESGAQIRIL-KDDHLP--SCSLSSN 332
Query: 193 NFVLISGESEAVKKALFAISAIMY 216
+ IS E V+K L+ I++ ++
Sbjct: 333 ELIQISREPFIVRKILYQIASRLH 356
Score = 42.4 bits (98), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 27 EKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV 73
E E+ N+ +V R+L P IG VIGK G++I SIR E+ A+++++
Sbjct: 275 EDSEEANQVTV--RLLVPSNQIGCVIGKGGQIIQSIRSESGAQIRIL 319
>gi|148833484|ref|NP_001092090.1| poly(rC)-binding protein 2 isoform c [Homo sapiens]
gi|157042772|ref|NP_001096636.1| poly(rC)-binding protein 2 isoform 3 [Mus musculus]
gi|73996241|ref|XP_857995.1| PREDICTED: poly(rC)-binding protein 2 isoform 20 [Canis lupus
familiaris]
gi|149714839|ref|XP_001504575.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Equus caballus]
gi|291389259|ref|XP_002711066.1| PREDICTED: poly(rC) binding protein 2-like isoform 3 [Oryctolagus
cuniculus]
gi|332206041|ref|XP_003252098.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Nomascus
leucogenys]
gi|348581075|ref|XP_003476303.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Cavia porcellus]
gi|410964551|ref|XP_003988817.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Felis catus]
gi|426224372|ref|XP_004006345.1| PREDICTED: poly(rC)-binding protein 2 isoform 3 [Ovis aries]
gi|426372755|ref|XP_004053283.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Gorilla gorilla
gorilla]
gi|51491472|dbj|BAD36897.1| poly(rC) binding protein 2 [Homo sapiens]
gi|119617112|gb|EAW96706.1| poly(rC) binding protein 2, isoform CRA_a [Homo sapiens]
gi|148672027|gb|EDL03974.1| poly(rC) binding protein 2, isoform CRA_a [Mus musculus]
gi|149031921|gb|EDL86833.1| rCG50739, isoform CRA_b [Rattus norvegicus]
Length = 331
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 158/336 (47%), Gaps = 36/336 (10%)
Query: 297 SGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVIT 356
+G++ + L IR+L ++G +IGK G ++K +R+ SGA+I++ + N E +IT
Sbjct: 3 TGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIIT 60
Query: 357 VTAIESPDDIKSMAVEAVL-LLQTKINDEDDDT-------VTIRLLVSSKVIGCIIGKSG 408
+ P + A ++ L+ I+ ++ VT+RL+V + G +IGK G
Sbjct: 61 LAG---PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGG 117
Query: 409 SIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDR 468
I EIR+ T A V+++ P ++ + + + G S+ + + QI + + + K
Sbjct: 118 CKIKEIRESTGAQVQVAGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLESPPKGV 174
Query: 469 DGSRNP-PVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYG 527
P P + I++ G ++ +IP Q A S +
Sbjct: 175 TIPYRPKPSSSPVIFAGGQAYTIQGQY-AIPQPDLTKLHQLAMQQS------------HF 221
Query: 528 SLSMGDSPYGSMSSYSSKL---YGGL---PPPLTLEVLVPANAVGKVIGKAGSNLANIRK 581
++ G++ + + S S ++ + GL + E+ +P + +G +IG+ G+ + IR+
Sbjct: 222 PMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQ 281
Query: 582 ISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLI 617
+SGA I++++ DR I+G+ A+ LI
Sbjct: 282 MSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLI 317
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 149/352 (42%), Gaps = 77/352 (21%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH 89
E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R++T
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIIT---- 60
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAV-----ANATDNDKKRKEKEECQI 144
L +A+ K A I + + ++ T++ + ++
Sbjct: 61 ------------------LAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRL 102
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAV 204
+VP+SQ ++IGK G IK +R T ++V T + + I+G +++
Sbjct: 103 VVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNST-------ERAITIAGIPQSI 155
Query: 205 KKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSV 264
+ + I +M + P+ T+ P PS P+ GG A I ++
Sbjct: 156 IECVKQICVVMLESPPKG-----VTIPYRPK----PSSSPVIFAGG---QAYTIQGQYAI 203
Query: 265 PSILGAARVPDL---QGYADTGNTWPVY--STGLSLV-----------SGLVGASQ--SE 306
P PDL A + +P+ +TG S + +GL ++Q S
Sbjct: 204 PQ-------PDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSH 256
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
EL I P + IG +IG+ G I IRQ SGAQI + + + + +T+T
Sbjct: 257 ELTI----PNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTIT 304
Score = 43.1 bits (100), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 383 DEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEV 442
D T + L + + +IGCIIG+ G+ INEIR+ + A ++I+ + D V +
Sbjct: 248 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN----PVEGSTDRQVTI 303
Query: 443 VGEVGSVRDALVQIILRLRDD 463
G S+ A I +RL +
Sbjct: 304 TGSAASISLAQYLINVRLSSE 324
>gi|348581995|ref|XP_003476762.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Cavia porcellus]
Length = 360
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 120/265 (45%), Gaps = 38/265 (14%)
Query: 384 EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVV 443
E T+T+R+L+ K +G IIGK G + IR+++ A + IS+G P + + +
Sbjct: 13 ELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCP------ERITTIT 66
Query: 444 GEVGSVRDALVQIILRLRDD--ALKDRDGS-RNPPVG----------ADHIYSSGTGI-- 488
G +V A+ I +L +D A GS PPV I +GT I
Sbjct: 67 GSTAAVFHAVSMIAFKLDEDLCAAPANGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKE 126
Query: 489 --SMPPLLPSIP--PVGPLGY-----DQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSM 539
PP +IP P LG +Q G ++ + + LS P+ S
Sbjct: 127 IRESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASP 186
Query: 540 SSYSSKLYGGLPPPL---TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSR 596
S + GL P + E LVP + +G VIG+ GS ++ IR++SGA I++ +
Sbjct: 187 S-----VVPGLDPAAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGA 241
Query: 597 GDRVALISGTPEQKRAAENLIQAFI 621
G+R I+G+P A+ LI A +
Sbjct: 242 GERHITITGSPVSIALAQYLITACL 266
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 121/323 (37%), Gaps = 90/323 (27%)
Query: 36 SVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKED 95
++ R+L +GS+IGK G+ + IR+++ AR+ + + +R+ TI
Sbjct: 17 TLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE--GSCPERITTITGSTAAVFH 74
Query: 96 VEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANII 155
F E LCAA + + ++++P+SQ ++I
Sbjct: 75 AVSMIAFKLDEDLCAA-----------------PANGGSVSRPPVTLRLVIPASQCGSLI 117
Query: 156 GKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIM 215
GKAG IK +R + PK A+ P H ++ +L + + +V+ A+
Sbjct: 118 GKAGTKIKEIR-------ESPPKGATIPYHP-SLSLGTVLLSANQGFSVQGQYGAV---- 165
Query: 216 YKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPD 275
+P E L+ A P PS VP GL P A
Sbjct: 166 ---TPAEVTKLQQLSGHAVP-FASPSVVP-----GLDPAAQ------------------- 197
Query: 276 LQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQ 335
+ S+E ++ P + IG VIG+ G I IRQ
Sbjct: 198 ---------------------------TSSQEFLV----PNDLIGCVIGRQGSKISEIRQ 226
Query: 336 ASGAQIDVDDTKDNRDECVITVT 358
SGA I + + + E IT+T
Sbjct: 227 MSGAHIKIGNQAEGAGERHITIT 249
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 79/173 (45%), Gaps = 24/173 (13%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
L +R+L ++G +IGK G T+K IR+ S A+I + + + E + T+T
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE--GSCPERITTITG------ST 69
Query: 368 SMAVEAVLLLQTKINDED------------DDTVTIRLLVSSKVIGCIIGKSGSIINEIR 415
+ AV ++ K+ DED VT+RL++ + G +IGK+G+ I EIR
Sbjct: 70 AAVFHAVSMIAFKL-DEDLCAAPANGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIR 128
Query: 416 KRTKADVRISKGDKPKCAD---ANDELVEVVGEVGSVRDALVQIILRLRDDAL 465
+ I + ++ V G+ G+V A V + +L A+
Sbjct: 129 ESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAV 181
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 80/179 (44%), Gaps = 22/179 (12%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQA--SGAQIDVDDT--------KDNRDECVITV 357
+ +R++ P ++ G +IGK G IK IR++ GA I + N+ V
Sbjct: 102 VTLRLVIPASQCGSLIGKAGTKIKEIRESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQ 161
Query: 358 TAIESPDDI---KSMAVEAVLLLQTKIN---DEDDDTVTIRLLVSSKVIGCIIGKSGSII 411
+P ++ + ++ AV + D T + LV + +IGC+IG+ GS I
Sbjct: 162 YGAVTPAEVTKLQQLSGHAVPFASPSVVPGLDPAAQTSSQEFLVPNDLIGCVIGRQGSKI 221
Query: 412 NEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDG 470
+EIR+ + A ++I + A + + + G S+ AL Q ++ + K G
Sbjct: 222 SEIRQMSGAHIKIGN----QAEGAGERHITITGSPVSI--ALAQYLITACLETAKSTSG 274
>gi|335299140|ref|XP_003358506.1| PREDICTED: poly(rC)-binding protein 4-like isoform 2 [Sus scrofa]
Length = 360
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 118/265 (44%), Gaps = 38/265 (14%)
Query: 384 EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVV 443
E T+T+R+L+ K +G IIGK G + IR+++ A + IS+G P + + +
Sbjct: 13 ELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCP------ERITTIT 66
Query: 444 GEVGSVRDALVQIILRLRDDALKDRDGSRN---PPVG----------ADHIYSSGTGI-- 488
G +V A+ I +L +D N PPV I +GT I
Sbjct: 67 GSTAAVFHAVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKE 126
Query: 489 --SMPPLLPSIP--PVGPLGY-----DQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSM 539
PP +IP P LG +Q G ++ + + LS P+ S
Sbjct: 127 IRESPPKGATIPYHPSLSLGTVLLSTNQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASP 186
Query: 540 SSYSSKLYGGLPPPL---TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSR 596
S + GL P + E LVP + +G VIG+ GS ++ IR++SGA I++ +
Sbjct: 187 S-----MVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGA 241
Query: 597 GDRVALISGTPEQKRAAENLIQAFI 621
G+R I+G+P A+ LI A +
Sbjct: 242 GERHVTITGSPVSIALAQYLITACL 266
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 72/323 (22%), Positives = 119/323 (36%), Gaps = 90/323 (27%)
Query: 36 SVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKED 95
++ R+L +GS+IGK G+ + IR+++ AR+ + + +R+ TI
Sbjct: 17 TLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE--GSCPERITTITGSTAAVFH 74
Query: 96 VEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANII 155
F E LCAA + + ++++P+SQ ++I
Sbjct: 75 AVSMIAFKLDEDLCAA-----------------PANGGNVSRPPVTLRLVIPASQCGSLI 117
Query: 156 GKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIM 215
GKAG IK +R PK A+ P H ++ +L + + +V+ A+
Sbjct: 118 GKAGTKIKEIRES-------PPKGATIPYHP-SLSLGTVLLSTNQGFSVQGQYGAV---- 165
Query: 216 YKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPD 275
+P E L+ A P PS VP GL P
Sbjct: 166 ---TPAEVTKLQQLSGHAVP-FASPSMVP-----GLDPGTQ------------------- 197
Query: 276 LQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQ 335
+ S+E ++ P + IG VIG+ G I IRQ
Sbjct: 198 ---------------------------TSSQEFLV----PNDLIGCVIGRQGSKISEIRQ 226
Query: 336 ASGAQIDVDDTKDNRDECVITVT 358
SGA I + + + E +T+T
Sbjct: 227 MSGAHIKIGNQAEGAGERHVTIT 249
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 79/173 (45%), Gaps = 24/173 (13%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
L +R+L ++G +IGK G T+K IR+ S A+I + + + E + T+T
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE--GSCPERITTITG------ST 69
Query: 368 SMAVEAVLLLQTKINDED------------DDTVTIRLLVSSKVIGCIIGKSGSIINEIR 415
+ AV ++ K+ DED VT+RL++ + G +IGK+G+ I EIR
Sbjct: 70 AAVFHAVSMIAFKL-DEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIR 128
Query: 416 KRTKADVRISKGDKPKCAD---ANDELVEVVGEVGSVRDALVQIILRLRDDAL 465
+ I + ++ V G+ G+V A V + +L A+
Sbjct: 129 ESPPKGATIPYHPSLSLGTVLLSTNQGFSVQGQYGAVTPAEVTKLQQLSGHAV 181
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 80/179 (44%), Gaps = 22/179 (12%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQA--SGAQIDVDDT--------KDNRDECVITV 357
+ +R++ P ++ G +IGK G IK IR++ GA I + N+ V
Sbjct: 102 VTLRLVIPASQCGSLIGKAGTKIKEIRESPPKGATIPYHPSLSLGTVLLSTNQGFSVQGQ 161
Query: 358 TAIESPDDI---KSMAVEAVLLLQTKIN---DEDDDTVTIRLLVSSKVIGCIIGKSGSII 411
+P ++ + ++ AV + D T + LV + +IGC+IG+ GS I
Sbjct: 162 YGAVTPAEVTKLQQLSGHAVPFASPSMVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKI 221
Query: 412 NEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDG 470
+EIR+ + A ++I + A + V + G S+ AL Q ++ + K G
Sbjct: 222 SEIRQMSGAHIKIGN----QAEGAGERHVTITGSPVSI--ALAQYLITACLETAKSTSG 274
>gi|296087074|emb|CBI33448.3| unnamed protein product [Vitis vinifera]
Length = 333
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 128/304 (42%), Gaps = 61/304 (20%)
Query: 57 KVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALL 116
++I +R +T+ ++++ + ++ VVTIY+ E DD + P QDAL
Sbjct: 8 EIIKQLRVDTKFKIRIDETVSRCEELVVTIYNF--SDETNAFDDSYTFVSP---TQDALF 62
Query: 117 KVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVT 176
+VH + + ++ D ++ + Q+LV S Q +IGK G I+ + S++ I +
Sbjct: 63 RVHDKVVSEKVHSEDFEEA--SQVTVQLLVTSDQIGCVIGKGGQIIQNIYSESGAQIYIL 120
Query: 177 PKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPS 236
D SCA+ FD V ISGE + + LF + +
Sbjct: 121 KNDH---LLSCALSFDELVQISGERPLLGR-LFIKLHLFFMIIQH--------------- 161
Query: 237 IIIPSDVPI-YPPGGLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTWPVYSTGLSL 295
++ S VPI Y GG S++G D+G+ W SL
Sbjct: 162 -LLASIVPIGYSSGG---------------SLIG-----------DSGD-W-----SRSL 188
Query: 296 VSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTK-DNRDECV 354
S + S+E +R++CP + GKG I IR A I VD T +C+
Sbjct: 189 YSVPRDEASSKEFSLRLVCPIGNTSGMFGKGSVIINQIRWEFRAIIKVDSTSVAEAYDCL 248
Query: 355 ITVT 358
+T++
Sbjct: 249 VTIS 252
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 68/132 (51%), Gaps = 16/132 (12%)
Query: 330 IKSIRQASGAQIDVDDTKDNRDECVITV-------TAIESPDDIKSMAVEAVL-----LL 377
IK +R + +I +D+T +E V+T+ A + S +A+ ++
Sbjct: 10 IKQLRVDTKFKIRIDETVSRCEELVVTIYNFSDETNAFDDSYTFVSPTQDALFRVHDKVV 69
Query: 378 QTKINDEDDD---TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDK-PKCA 433
K++ ED + VT++LLV+S IGC+IGK G II I + A + I K D CA
Sbjct: 70 SEKVHSEDFEEASQVTVQLLVTSDQIGCVIGKGGQIIQNIYSESGAQIYILKNDHLLSCA 129
Query: 434 DANDELVEVVGE 445
+ DELV++ GE
Sbjct: 130 LSFDELVQISGE 141
>gi|224097170|ref|XP_002310862.1| predicted protein [Populus trichocarpa]
gi|222853765|gb|EEE91312.1| predicted protein [Populus trichocarpa]
Length = 245
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 89/169 (52%), Gaps = 12/169 (7%)
Query: 286 WPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDD 345
P YS ++ ++ ++ R++C GR+IG GG +++++ +GA I
Sbjct: 60 LPTYSENIATDGDHKKPNEQSQVQFRMICSHGAAGRIIGTGGSVVRALQNQTGASIIFAR 119
Query: 346 TKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKINDED-----------DDTVTIRLL 394
N D+ ++TV+A+E+ + S A A+LL+ + + D + TVT LL
Sbjct: 120 PITNSDDRLVTVSALENLESSHSPAQNALLLVFARSIEHDIERARSLGLIEEITVTATLL 179
Query: 395 VSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDK-PKCADANDELVEV 442
+ S + C+IG+ G + +E+ + T AD++I +GD+ A ND +V+V
Sbjct: 180 LPSNKVYCLIGRGGRVDSEMIETTGADIQIMQGDQFFDLASKNDAVVQV 228
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 85/182 (46%), Gaps = 27/182 (14%)
Query: 30 EKGNEES-VIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYS 88
+K NE+S V +R++C G G +IG G V+ +++ +T A + P + DR+VT
Sbjct: 74 KKPNEQSQVQFRMICSHGAAGRIIGTGGSVVRALQNQTGASIIFARPITNSDDRLVT--- 130
Query: 89 HVKDKEDVEVDDEFNDKEPLCAAQDALLKVHA-AIANAVANATDNDKKRKEKEECQILVP 147
V E++E + P AQ+ALL V A +I + + A + +L+P
Sbjct: 131 -VSALENLE-----SSHSP---AQNALLLVFARSIEHDIERARSLGLIEEITVTATLLLP 181
Query: 148 SSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKA 207
S++ +IG+ G + T I++ M+ D F ++ +++AV +
Sbjct: 182 SNKVYCLIGRGGRVDSEMIETTGADIQI-------------MQGDQFFDLASKNDAVVQV 228
Query: 208 LF 209
F
Sbjct: 229 QF 230
>gi|47226335|emb|CAG09303.1| unnamed protein product [Tetraodon nigroviridis]
Length = 760
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 136/293 (46%), Gaps = 38/293 (12%)
Query: 340 QIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKINDEDD-DTVTIRLLVSSK 398
Q+D+ K+N +T +P+ + + ++Q + N+ + + ++++ S+
Sbjct: 291 QVDIHR-KENAGAAEKPITIHSTPEGCSAACRMIMEIVQKEANETKAMEDIPLKIIASNN 349
Query: 399 VIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIIL 458
IG +IGK G + +I + T + IS + N+ + V G + + +A V+I+
Sbjct: 350 YIGRLIGKQGRNLKKIEEETGTKITISSLQDLNIYN-NERTITVKGSLEACCNAEVEIMK 408
Query: 459 RLR-----DDALKDRDGSRNPPVGADHIYSSGTGISMPPLLPS-------IPPVGPLGYD 506
+LR D A ++ S P + + + G S P+LPS +PPVGP GY+
Sbjct: 409 KLREAYENDVAAINQQTSLIPGLNLNAL---GIFSSALPVLPSAAGPRSTMPPVGPAGYN 465
Query: 507 QRADSGSGIGMLSS-SSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAV 565
IG S SSLYG S + + + L+ +P AV
Sbjct: 466 ------PFIGHSSHPSSLYGVPPASAIPHQHAAQEQEVAYLF------------IPTQAV 507
Query: 566 GKVIGKAGSNLANIRKISGATIEMSDS-KSSRGDRVALISGTPEQKRAAENLI 617
G +IGK G ++ + +GA+I+++ + K +R+ +I+GTPE + A+ I
Sbjct: 508 GALIGKKGQHIKQLAHFAGASIKIAPAEKPDATERMVIITGTPEAQFKAQGRI 560
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 90/204 (44%), Gaps = 14/204 (6%)
Query: 250 GLYPNADPILPS----RSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGL--VGAS 303
G++ +A P+LPS RS +G A G++ + P G+ S + A+
Sbjct: 437 GIFSSALPVLPSAAGPRSTMPPVGPAGYNPFIGHS----SHPSSLYGVPPASAIPHQHAA 492
Query: 304 QSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDT-KDNRDECVITVTAIES 362
Q +E V + P +G +IGK G IK + +GA I + K + E ++ +T
Sbjct: 493 QEQE-VAYLFIPTQAVGALIGKKGQHIKQLAHFAGASIKIAPAEKPDATERMVIITGTPE 551
Query: 363 PDDIKSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADV 422
+ L + +++ + + V S G +IGK G +NE++ T A+V
Sbjct: 552 AQFKAQGRIFGKLKEENIFTGKEEVRLETHIRVPSTAAGRVIGKGGKTVNELQSLTSAEV 611
Query: 423 RISKGDKPKCADANDELVEVVGEV 446
+ + P + N+ +V++ G
Sbjct: 612 IVPRDQTPD--EKNEVVVKICGHF 633
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 10/108 (9%)
Query: 127 ANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHS 186
A+A + +E+E + +P+ +IGK G IK+L SIK+ P + + T
Sbjct: 483 ASAIPHQHAAQEQEVAYLFIPTQAVGALIGKKGQHIKQLAHFAGASIKIAPAEKPDAT-- 540
Query: 187 CAMEFDNFVLISGESEAVKKALFAISAIMYK---FSPREDIPLETTVR 231
+ V+I+G EA KA I + + F+ +E++ LET +R
Sbjct: 541 -----ERMVIITGTPEAQFKAQGRIFGKLKEENIFTGKEEVRLETHIR 583
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 60/151 (39%), Gaps = 25/151 (16%)
Query: 32 GNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDP-FPGAKDRVVTIYSHV 90
E+ V Y + P +G++IGK G+ I + A +K+ P A +R+V I
Sbjct: 492 AQEQEVAY-LFIPTQAVGALIGKKGQHIKQLAHFAGASIKIAPAEKPDATERMVII---- 546
Query: 91 KDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQ 150
+A K I + K + + E I VPS+
Sbjct: 547 ------------------TGTPEAQFKAQGRIFGKLKEENIFTGKEEVRLETHIRVPSTA 588
Query: 151 SANIIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+ +IGK G T+ L+S T + + P+D +
Sbjct: 589 AGRVIGKGGKTVNELQSLTSAEV-IVPRDQT 618
>gi|45552763|ref|NP_995906.1| bancal, isoform C [Drosophila melanogaster]
gi|45445681|gb|AAM68389.2| bancal, isoform C [Drosophila melanogaster]
gi|261338783|gb|ACX70073.1| RE05515p [Drosophila melanogaster]
Length = 502
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 88/177 (49%), Gaps = 12/177 (6%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
E +R+L P + G VIGKGG I+ +R A + VDD++ E I ++A DI
Sbjct: 28 EETVRILIPSSIAGAVIGKGGQHIQKMRTQYKATVSVDDSQG--PERTIQISA-----DI 80
Query: 367 KSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISK 426
+S ++ K +E D+ +RLL+ + GC+IGK G I EIR R R K
Sbjct: 81 ESTL--EIITEMLKYFEERDEDFDVRLLIHQSLAGCVIGKGGQKIKEIRDRIGC--RFLK 136
Query: 427 GDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYS 483
+ D +V+ VG+ V +A+ ++I RD +K + + P+ D +Y+
Sbjct: 137 VFSNVAPQSTDRVVQTVGKQSQVIEAVREVITLTRDTPIKGAIHNYD-PMNFDRVYA 192
Score = 46.2 bits (108), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 76/163 (46%), Gaps = 36/163 (22%)
Query: 6 KRYRSQRDNDRDGKNQKRRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQE 65
KR R +R+ + +G+ + ++K + NEE+V RIL P + G+VIGK G+ I +R +
Sbjct: 3 KRLRMKREMNDEGEGPQ---DQKRNRRNEETV--RILIPSSIAGAVIGKGGQHIQKMRTQ 57
Query: 66 TRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANA 125
+A V V D +R + I + ++ ++ + +LK
Sbjct: 58 YKATVSVDD--SQGPERTIQISADIESTLEIITE---------------MLKYF------ 94
Query: 126 VANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSK 168
++R E + ++L+ S + +IGK G IK +R +
Sbjct: 95 --------EERDEDFDVRLLIHQSLAGCVIGKGGQKIKEIRDR 129
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 53/110 (48%), Gaps = 14/110 (12%)
Query: 131 DNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAME 190
D + R+ +E +IL+PSS + +IGK G I+++R++ + ++ V D+ P + +
Sbjct: 20 DQKRNRRNEETVRILIPSSIAGAVIGKGGQHIQKMRTQYKATVSV--DDSQGPERTIQIS 77
Query: 191 FDNFVLISGESEAVKKALFAISAIMYKFSPR-EDIPLETTVREAPPSIII 239
D ++ L I+ ++ F R ED + + ++ +I
Sbjct: 78 AD-----------IESTLEIITEMLKYFEERDEDFDVRLLIHQSLAGCVI 116
>gi|452846671|gb|EME48603.1| hypothetical protein DOTSEDRAFT_67594 [Dothistroma septosporum
NZE10]
Length = 361
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 143/314 (45%), Gaps = 39/314 (12%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT-AIESPDD 365
+L +R + + G +IGK G + +R+ +G + V + V+TVT A+ D
Sbjct: 41 QLTLRAIVTSKEAGVIIGKAGQNVADLREKTGVRAGVSKVVPGVHDRVLTVTGALTGIAD 100
Query: 366 IKSMAVEAVLLLQTKINDE----DDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKAD 421
+ ++++ ++ + +T IRLL+S +G IIG+ G I +I+ +
Sbjct: 101 AYGLVADSLVKGAPQMGMGGVVGNPNTHPIRLLISHNQMGTIIGRQGLKIKQIQDASGVR 160
Query: 422 VRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHI 481
+ K P+ + + +VEV G ++ A+ +I L DD + P +
Sbjct: 161 MVAQKEMLPQ---STERIVEVQGTPDGIQKAVWEIGKCLVDDEQRGYGTVLYSPA----V 213
Query: 482 YSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSS 541
G G PPL + PVGP G+G G S + G G+ G +P +
Sbjct: 214 RVQGGG---PPLNGTGAPVGP---------GAGYGAPRSYNRTGNGADFTGAAP----AP 257
Query: 542 YSSKLYGGLPPPLTLE---------VLVPANAVGKVIGKAGSNLANIRKISGATIEMSDS 592
YS + G P P T E + +PA+ VG +IG+ GS ++ IRK SGA I ++ +
Sbjct: 258 YSPRRQEG-PLPTTNEDGEDIQTQNISIPADMVGCIIGRGGSKISEIRKSSGARISIAKA 316
Query: 593 -KSSRGDRVALISG 605
G+R+ I+G
Sbjct: 317 PHDETGERMFTITG 330
>gi|45552765|ref|NP_995907.1| bancal, isoform A [Drosophila melanogaster]
gi|442624312|ref|NP_001261102.1| bancal, isoform F [Drosophila melanogaster]
gi|21626883|gb|AAF57450.2| bancal, isoform A [Drosophila melanogaster]
gi|189182182|gb|ACD81867.1| LP16172p [Drosophila melanogaster]
gi|440214543|gb|AGB93634.1| bancal, isoform F [Drosophila melanogaster]
Length = 496
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 88/177 (49%), Gaps = 12/177 (6%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
E +R+L P + G VIGKGG I+ +R A + VDD++ E I ++A DI
Sbjct: 22 EETVRILIPSSIAGAVIGKGGQHIQKMRTQYKATVSVDDSQG--PERTIQISA-----DI 74
Query: 367 KSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISK 426
+S ++ K +E D+ +RLL+ + GC+IGK G I EIR R R K
Sbjct: 75 ESTL--EIITEMLKYFEERDEDFDVRLLIHQSLAGCVIGKGGQKIKEIRDRIGC--RFLK 130
Query: 427 GDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYS 483
+ D +V+ VG+ V +A+ ++I RD +K + + P+ D +Y+
Sbjct: 131 VFSNVAPQSTDRVVQTVGKQSQVIEAVREVITLTRDTPIKGAIHNYD-PMNFDRVYA 186
Score = 42.4 bits (98), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 33/143 (23%)
Query: 26 NEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVT 85
++K + NEE+V RIL P + G+VIGK G+ I +R + +A V V D +R +
Sbjct: 14 DQKRNRRNEETV--RILIPSSIAGAVIGKGGQHIQKMRTQYKATVSVDD--SQGPERTIQ 69
Query: 86 IYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQIL 145
I + ++ ++ + +LK ++R E + ++L
Sbjct: 70 ISADIESTLEIITE---------------MLKYF--------------EERDEDFDVRLL 100
Query: 146 VPSSQSANIIGKAGATIKRLRSK 168
+ S + +IGK G IK +R +
Sbjct: 101 IHQSLAGCVIGKGGQKIKEIRDR 123
Score = 40.0 bits (92), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 53/110 (48%), Gaps = 14/110 (12%)
Query: 131 DNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAME 190
D + R+ +E +IL+PSS + +IGK G I+++R++ + ++ V D+ P + +
Sbjct: 14 DQKRNRRNEETVRILIPSSIAGAVIGKGGQHIQKMRTQYKATVSV--DDSQGPERTIQIS 71
Query: 191 FDNFVLISGESEAVKKALFAISAIMYKFSPR-EDIPLETTVREAPPSIII 239
D ++ L I+ ++ F R ED + + ++ +I
Sbjct: 72 AD-----------IESTLEIITEMLKYFEERDEDFDVRLLIHQSLAGCVI 110
>gi|410951301|ref|XP_003982336.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Felis catus]
Length = 360
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 118/265 (44%), Gaps = 38/265 (14%)
Query: 384 EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVV 443
E T+T+R+L+ K +G IIGK G + IR+++ A + IS+G P + + +
Sbjct: 13 ELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCP------ERITTIT 66
Query: 444 GEVGSVRDALVQIILRLRDDALKDRDGSRN---PPVG----------ADHIYSSGTGI-- 488
G +V A+ I +L +D N PPV I +GT I
Sbjct: 67 GSTAAVFHAVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKE 126
Query: 489 --SMPPLLPSIP--PVGPLGY-----DQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSM 539
PP +IP P LG +Q G ++ + + LS P+ S
Sbjct: 127 IRESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASP 186
Query: 540 SSYSSKLYGGLPPPL---TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSR 596
S + GL P + E LVP + +G VIG+ GS ++ IR++SGA I++ +
Sbjct: 187 S-----MVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGA 241
Query: 597 GDRVALISGTPEQKRAAENLIQAFI 621
G+R I+G+P A+ LI A +
Sbjct: 242 GERHVTITGSPVSIALAQYLITACL 266
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 72/323 (22%), Positives = 119/323 (36%), Gaps = 90/323 (27%)
Query: 36 SVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKED 95
++ R+L +GS+IGK G+ + IR+++ AR+ + + +R+ TI
Sbjct: 17 TLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE--GSCPERITTITGSTAAVFH 74
Query: 96 VEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANII 155
F E LCAA + + ++++P+SQ ++I
Sbjct: 75 AVSMIAFKLDEDLCAA-----------------PANGGNVSRPPVTLRLVIPASQCGSLI 117
Query: 156 GKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIM 215
GKAG IK +R PK A+ P H ++ +L + + +V+ A+
Sbjct: 118 GKAGTKIKEIRES-------PPKGATIPYHP-SLSLGTVLLSANQGFSVQGQYGAV---- 165
Query: 216 YKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPD 275
+P E L+ A P PS VP GL P
Sbjct: 166 ---TPAEVTKLQQLSGHAVP-FASPSMVP-----GLDPGTQ------------------- 197
Query: 276 LQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQ 335
+ S+E ++ P + IG VIG+ G I IRQ
Sbjct: 198 ---------------------------TSSQEFLV----PNDLIGCVIGRQGSKISEIRQ 226
Query: 336 ASGAQIDVDDTKDNRDECVITVT 358
SGA I + + + E +T+T
Sbjct: 227 MSGAHIKIGNQAEGAGERHVTIT 249
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 79/173 (45%), Gaps = 24/173 (13%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
L +R+L ++G +IGK G T+K IR+ S A+I + + + E + T+T
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE--GSCPERITTITG------ST 69
Query: 368 SMAVEAVLLLQTKINDED------------DDTVTIRLLVSSKVIGCIIGKSGSIINEIR 415
+ AV ++ K+ DED VT+RL++ + G +IGK+G+ I EIR
Sbjct: 70 AAVFHAVSMIAFKL-DEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIR 128
Query: 416 KRTKADVRISKGDKPKCAD---ANDELVEVVGEVGSVRDALVQIILRLRDDAL 465
+ I + ++ V G+ G+V A V + +L A+
Sbjct: 129 ESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAV 181
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 80/179 (44%), Gaps = 22/179 (12%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQA--SGAQIDVDDT--------KDNRDECVITV 357
+ +R++ P ++ G +IGK G IK IR++ GA I + N+ V
Sbjct: 102 VTLRLVIPASQCGSLIGKAGTKIKEIRESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQ 161
Query: 358 TAIESPDDI---KSMAVEAVLLLQTKIN---DEDDDTVTIRLLVSSKVIGCIIGKSGSII 411
+P ++ + ++ AV + D T + LV + +IGC+IG+ GS I
Sbjct: 162 YGAVTPAEVTKLQQLSGHAVPFASPSMVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKI 221
Query: 412 NEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDG 470
+EIR+ + A ++I + A + V + G S+ AL Q ++ + K G
Sbjct: 222 SEIRQMSGAHIKIGN----QAEGAGERHVTITGSPVSI--ALAQYLITACLETAKSTSG 274
>gi|6687391|emb|CAB64936.1| heterogeneous nuclear ribonucleoprotein (hnRNP) [Drosophila
melanogaster]
Length = 496
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 88/177 (49%), Gaps = 12/177 (6%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
E +R+L P + G VIGKGG I+ +R A + VDD++ E I ++A DI
Sbjct: 22 EETVRILIPSSIAGAVIGKGGQHIQKMRTQYKATVSVDDSQG--PERTIQISA-----DI 74
Query: 367 KSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISK 426
+S ++ K +E D+ +RLL+ + GC+IGK G I EIR R R K
Sbjct: 75 ESTL--EIITEMLKYFEERDEDFDVRLLIHQSLAGCVIGKGGQKIKEIRDRI--GCRFLK 130
Query: 427 GDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYS 483
+ D +V+ VG+ V +A+ ++I RD +K + + P+ D +Y+
Sbjct: 131 VFSNVAPQSTDRVVQTVGKQSQVIEAVREVITLTRDTPIKGAIHNYD-PMNFDRVYA 186
Score = 42.7 bits (99), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 33/143 (23%)
Query: 26 NEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVT 85
++K + NEE+V RIL P + G+VIGK G+ I +R + +A V V D +R +
Sbjct: 14 DQKRNRRNEETV--RILIPSSIAGAVIGKGGQHIQKMRTQYKATVSVDD--SQGPERTIQ 69
Query: 86 IYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQIL 145
I + ++ ++ + +LK ++R E + ++L
Sbjct: 70 ISADIESTLEIITE---------------MLKYF--------------EERDEDFDVRLL 100
Query: 146 VPSSQSANIIGKAGATIKRLRSK 168
+ S + +IGK G IK +R +
Sbjct: 101 IHQSLAGCVIGKGGQKIKEIRDR 123
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 53/110 (48%), Gaps = 14/110 (12%)
Query: 131 DNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAME 190
D + R+ +E +IL+PSS + +IGK G I+++R++ + ++ V D+ P + +
Sbjct: 14 DQKRNRRNEETVRILIPSSIAGAVIGKGGQHIQKMRTQYKATVSV--DDSQGPERTIQIS 71
Query: 191 FDNFVLISGESEAVKKALFAISAIMYKFSPR-EDIPLETTVREAPPSIII 239
D ++ L I+ ++ F R ED + + ++ +I
Sbjct: 72 AD-----------IESTLEIITEMLKYFEERDEDFDVRLLIHQSLAGCVI 110
>gi|47214279|emb|CAG01336.1| unnamed protein product [Tetraodon nigroviridis]
Length = 408
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 139/309 (44%), Gaps = 35/309 (11%)
Query: 335 QASGAQIDVDDTKDNRDECVITVTAIESPDD--IKSMAVEAVLLLQTKINDEDDDT---- 388
Q SGA+I++ + N E ++T+T P D K+ A+ A + IN +
Sbjct: 93 QQSGARINISE--GNCPERIVTITG---PTDAIFKAFAMIAYKFEEDIINSMSNSPATSK 147
Query: 389 --VTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEV 446
VT+RL+V + G +IGK GS I E+R+ T A V+++ P ++ + V + G
Sbjct: 148 PPVTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVAGDMLP---NSTERAVTISGTP 204
Query: 447 GSVRDALVQIILRLRDDALKDRDGSRNP-PVGADHIYSSGTG--------ISMPPLLPSI 497
++ + QI + + + K P P I+S G I P L +
Sbjct: 205 EAIIQCVKQICVVMLESPPKGATIPYRPKPASTPVIFSGGQAYTIQGQYAIPHPDQLSKL 264
Query: 498 -------PPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGL 550
PP PLG Q + G + + LS + S SS ++ L G
Sbjct: 265 HQLAMQQPPFTPLG--QTTPAFPGTYPPTWRPRWPQLLLSFVPADARSSSSVTAALDAGN 322
Query: 551 PPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQK 610
T E+ +P + +G +IG+ G+ + IR++SGA I+++++ +R I+GTP
Sbjct: 323 QAS-THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAMEGSSERQITITGTPANI 381
Query: 611 RAAENLIQA 619
A+ LI A
Sbjct: 382 SLAQYLINA 390
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 112/272 (41%), Gaps = 40/272 (14%)
Query: 113 DALLKVHAAIA-----NAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRS 167
DA+ K A IA + + + +++ K +++VP+SQ ++IGK G+ IK +R
Sbjct: 118 DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRE 177
Query: 168 KTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPR-EDIPL 226
T ++V T + V ISG EA+ + + I +M + P+ IP
Sbjct: 178 STGAQVQVAGDMLPNST-------ERAVTISGTPEAIIQCVKQICVVMLESPPKGATIPY 230
Query: 227 ETTVREAPPSIIIPSDVPIYPPGGLY--PNADPI-----LPSRSVPSILGAARVPDLQG- 278
P +I S Y G Y P+ D + L + P P G
Sbjct: 231 RPKPASTP---VIFSGGQAYTIQGQYAIPHPDQLSKLHQLAMQQPPFTPLGQTTPAFPGT 287
Query: 279 YADTGNT-WPVYSTGL---------SLVSGLVGASQ--SEELVIRVLCPFNKIGRVIGKG 326
Y T WP S+ + L +Q + EL I P + IG +IG+
Sbjct: 288 YPPTWRPRWPQLLLSFVPADARSSSSVTAALDAGNQASTHELTI----PNDLIGCIIGRQ 343
Query: 327 GGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
G I IRQ SGAQI + + + E IT+T
Sbjct: 344 GTKINEIRQMSGAQIKIANAMEGSSERQITIT 375
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTI 86
+ GN+ S + + P+ +IG +IG+ G IN IRQ + A++K+ + G+ +R +TI
Sbjct: 319 DAGNQAST-HELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAMEGSSERQITI 374
>gi|355746831|gb|EHH51445.1| hypothetical protein EGM_10814, partial [Macaca fascicularis]
Length = 542
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 148/333 (44%), Gaps = 41/333 (12%)
Query: 301 GASQSEE--LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
G SQ+ + +RVL P +G GK G TIK+I + + +++D+ K+N VT
Sbjct: 128 GTSQARQIDFPLRVLVPTQFVGANSGKEGLTIKNITKQTQSRVDIHR-KENSGAAEKPVT 186
Query: 359 AIESPDDIKSMAVEAVLLLQTKINDEDD--DTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
+P+ S A +L + K DE + + +++ + ++G +IGK G + +I
Sbjct: 187 IHATPEGT-SEACRMILEIMQKEADETKLAEEIPLKIFAHNGLVGRLIGKEGRNLKKIEH 245
Query: 417 RTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPV 476
T + IS + + + V G V + A ++I+ +LR+ A ++ + N
Sbjct: 246 ETGTKITISSLQDLSIYNP-ERTITVKGTVEACASAEIEIMKKLRE-AFENDMLAVNQQA 303
Query: 477 GADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPY 536
L+P + + LG +G+ +LS + + P+
Sbjct: 304 N---------------LIPGLN-LSALGI-----FSTGLSVLSPPAGPRGAPPAAPYHPF 342
Query: 537 GSMSSYSSKLY-----------GGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGA 585
+ S Y S LY P + + +P AVG +IGK G+++ + + +GA
Sbjct: 343 ATHSGYFSSLYPHHQFGPFPHHHSYPEQEVVNLFIPTQAVGAIIGKKGAHIKQLARFAGA 402
Query: 586 TIEMSDSKS-SRGDRVALISGTPEQKRAAENLI 617
+I+++ ++ R+ +I+G PE + A+ I
Sbjct: 403 SIKIAPAEGPDVSKRMVIITGPPEAQFKAQGRI 435
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 74/170 (43%), Gaps = 33/170 (19%)
Query: 303 SQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIES 362
S E+ V+ + P +G +IGK G IK + + +GA I + E
Sbjct: 366 SYPEQEVVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--------------APAEG 411
Query: 363 PDDIKSMAV-----EAVLLLQTKI----------NDEDDDTVTIRLLVSSKVIGCIIGKS 407
PD K M + EA Q +I N +++ + + V S G +IGK
Sbjct: 412 PDVSKRMVIITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKG 471
Query: 408 GSIINEIRKRTKADVRISKGDKPKCADANDE-LVEVVGEVGSVRDALVQI 456
G +NE++ T A+V + + P D N+E +V ++G + + A +I
Sbjct: 472 GKTVNELQNLTSAEVIVPRDQTP---DENEEVIVRIIGHFFASQTAQRKI 518
Score = 43.1 bits (100), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 49/97 (50%), Gaps = 10/97 (10%)
Query: 138 EKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLI 197
E+E + +P+ IIGK GA IK+L SIK+ P + P S M V+I
Sbjct: 369 EQEVVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEG--PDVSKRM-----VII 421
Query: 198 SGESEAVKKALFAISAIMYK---FSPREDIPLETTVR 231
+G EA KA I + + F+P+E++ LE +R
Sbjct: 422 TGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIR 458
Score = 39.7 bits (91), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 57/148 (38%), Gaps = 24/148 (16%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPF-PGAKDRVVTIYSHVKDK 93
E + + P +G++IGK G I + + A +K+ P R+V I
Sbjct: 369 EQEVVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSKRMVII------- 421
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
+A K I + + K + K E I VPSS +
Sbjct: 422 ---------------TGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGR 466
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+IGK G T+ L++ T + + P+D +
Sbjct: 467 VIGKGGKTVNELQNLTSAEV-IVPRDQT 493
>gi|334343559|ref|XP_003341817.1| PREDICTED: poly(rC)-binding protein 4-like isoform 2 [Monodelphis
domestica]
Length = 367
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 122/275 (44%), Gaps = 58/275 (21%)
Query: 384 EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVV 443
E T+T+R+++ K +G IIGK G + IR+++ A + IS+G P + + +
Sbjct: 13 ELSITLTLRMIMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCP------ERITTIT 66
Query: 444 GEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSGTGISMPPL-LPSIPPVGP 502
G G+V A+ I +L D D PP G IS PP+ L + P
Sbjct: 67 GSTGAVFHAVSMIAFKL------DEDLCTGPPNGGS--------ISKPPVTLRLVIPASQ 112
Query: 503 LGYDQRADSGSGIGMLSSSSLYG-----YGSLSMG------------DSPYGSMS-SYSS 544
G +G+ I + S G + SLS+G YG+++ + S
Sbjct: 113 CG-SLIGKAGTKIKEIRESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGTVTPAEVS 171
Query: 545 KL--YGGLPPPL----------------TLEVLVPANAVGKVIGKAGSNLANIRKISGAT 586
KL G P P + E LVP + +G VIG+ GS ++ IR++SGA
Sbjct: 172 KLQQLSGHPVPFASPSVVPGLDPSAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAH 231
Query: 587 IEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFI 621
I++ + G+R I+G+P A+ LI A +
Sbjct: 232 IKIGNQAEGSGERHVTITGSPVSIALAQYLITACL 266
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 62/121 (51%), Gaps = 21/121 (17%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
L +R++ ++G +IGK G T+K IR+ S A+I + + + E + T+T
Sbjct: 18 LTLRMIMHGKEVGSIIGKKGETVKRIREQSSARITISE--GSCPERITTITG------ST 69
Query: 368 SMAVEAVLLLQTKINDEDDDT------------VTIRLLVSSKVIGCIIGKSGSIINEIR 415
AV ++ K+ DED T VT+RL++ + G +IGK+G+ I EIR
Sbjct: 70 GAVFHAVSMIAFKL-DEDLCTGPPNGGSISKPPVTLRLVIPASQCGSLIGKAGTKIKEIR 128
Query: 416 K 416
+
Sbjct: 129 E 129
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 80/180 (44%), Gaps = 24/180 (13%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQA--SGAQIDVDDT--------KDNRDECVI-- 355
+ +R++ P ++ G +IGK G IK IR++ GA I + N+ V
Sbjct: 102 VTLRLVIPASQCGSLIGKAGTKIKEIRESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQ 161
Query: 356 --TVTAIESPDDIKSMAVEAVLLLQTKIN---DEDDDTVTIRLLVSSKVIGCIIGKSGSI 410
TVT E ++ ++ V + D T + LV + +IGC+IG+ GS
Sbjct: 162 YGTVTPAEV-SKLQQLSGHPVPFASPSVVPGLDPSAQTSSQEFLVPNDLIGCVIGRQGSK 220
Query: 411 INEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDG 470
I+EIR+ + A ++I + + + V + G S+ AL Q ++ + K G
Sbjct: 221 ISEIRQMSGAHIKIGN----QAEGSGERHVTITGSPVSI--ALAQYLITACLETAKSTSG 274
Score = 45.4 bits (106), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 105/243 (43%), Gaps = 61/243 (25%)
Query: 153 NIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAIS 212
+IIGK G T+KR+R ++S ++T + S P + I+G + AV A+S
Sbjct: 31 SIIGKKGETVKRIRE--QSSARITISEGSCP--------ERITTITGSTGAV---FHAVS 77
Query: 213 AIMYKFSPREDI----PLETTVREAPPSI--IIPS---------------DVPIYPPGGL 251
I +K ED+ P ++ + P ++ +IP+ ++ PP G
Sbjct: 78 MIAFKLD--EDLCTGPPNGGSISKPPVTLRLVIPASQCGSLIGKAGTKIKEIRESPPKG- 134
Query: 252 YPNADPILPSRSVPSILGAARVPDLQGYADTGNT----------------WPVYSTGLSL 295
P PS S+ ++L +A QG++ G PV S+
Sbjct: 135 --ATIPYHPSLSLGTVLLSAN----QGFSVQGQYGTVTPAEVSKLQQLSGHPVPFASPSV 188
Query: 296 VSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVI 355
V GL ++Q+ L P + IG VIG+ G I IRQ SGA I + + + E +
Sbjct: 189 VPGLDPSAQTSSQ--EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGSGERHV 246
Query: 356 TVT 358
T+T
Sbjct: 247 TIT 249
>gi|195430448|ref|XP_002063267.1| GK21481 [Drosophila willistoni]
gi|194159352|gb|EDW74253.1| GK21481 [Drosophila willistoni]
Length = 505
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 88/177 (49%), Gaps = 12/177 (6%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
E +R+L P + G VIGKGG I+ +R A + VDD++ E I ++A DI
Sbjct: 21 EETVRILIPSSIAGAVIGKGGQHIQKMRTQYKATVSVDDSQG--PERTIQISA-----DI 73
Query: 367 KSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISK 426
+S ++ K +E D+ +RLL+ + GC+IGK G I EIR R R K
Sbjct: 74 ESTL--EIITEMLKYFEERDEDFDVRLLIHQSLAGCVIGKGGQKIKEIRDRIGC--RFLK 129
Query: 427 GDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYS 483
+ D +V+ VG+ V +A+ ++I RD +K + + P+ D +Y+
Sbjct: 130 VFSNVAPQSTDRVVQTVGKQSQVIEAVREVITLTRDTPIKGAIHNYD-PMNFDRVYA 185
Score = 42.0 bits (97), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 33/143 (23%)
Query: 26 NEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVT 85
++K + NEE+V RIL P + G+VIGK G+ I +R + +A V V D +R +
Sbjct: 13 DQKRNRRNEETV--RILIPSSIAGAVIGKGGQHIQKMRTQYKATVSVDD--SQGPERTIQ 68
Query: 86 IYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQIL 145
I + ++ ++ + +LK ++R E + ++L
Sbjct: 69 ISADIESTLEIITE---------------MLKYF--------------EERDEDFDVRLL 99
Query: 146 VPSSQSANIIGKAGATIKRLRSK 168
+ S + +IGK G IK +R +
Sbjct: 100 IHQSLAGCVIGKGGQKIKEIRDR 122
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 54/112 (48%), Gaps = 14/112 (12%)
Query: 129 ATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCA 188
A D + R+ +E +IL+PSS + +IGK G I+++R++ + ++ V D+ P +
Sbjct: 11 AQDQKRNRRNEETVRILIPSSIAGAVIGKGGQHIQKMRTQYKATVSV--DDSQGPERTIQ 68
Query: 189 MEFDNFVLISGESEAVKKALFAISAIMYKFSPR-EDIPLETTVREAPPSIII 239
+ D ++ L I+ ++ F R ED + + ++ +I
Sbjct: 69 ISAD-----------IESTLEIITEMLKYFEERDEDFDVRLLIHQSLAGCVI 109
>gi|291358560|gb|ADD96765.1| heterogeneous nuclear ribonuclear protein K [Capra hircus]
Length = 441
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 96/398 (24%), Positives = 159/398 (39%), Gaps = 90/398 (22%)
Query: 305 SEELV-IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTA---- 359
++E+V +R+L G VIGKGG IK++R A + V D+ + E +++++A
Sbjct: 39 TDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDS--SGPERILSISADIET 96
Query: 360 -----------------IESPDDIKSMAVE--AVLLLQTKINDEDDDTVTIRLLVSSKVI 400
+ SP + +E AV L + D +RLL+ +
Sbjct: 97 IGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCELRLLIHQSLA 156
Query: 401 GCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRL 460
G IIG G+ I E+R+ T+ +++ + C + D +V + G+ V + + I+ +
Sbjct: 157 GGIIGVKGAKIKELRENTQTTIKLFQ---ECCPQSTDRVVLIGGKPDRVVECIKIILDLI 213
Query: 461 RDDALKDR----------------------DGSRNPPVGA--------DHIYSSGTGISM 490
+ +K R D R PVG D + G M
Sbjct: 214 SESPIKGRAQPYDPNFYDETYDYGGFTMMFDDRRGRPVGFPMRGRGGFDRMPPGRGGRPM 273
Query: 491 PPLLPSIPPVGP-------------LGYDQRADSGSGI-GMLSSSSLYGYGS-------- 528
PP + P + YD+R G GM+ S+ + S
Sbjct: 274 PPSRRDYDDMSPRRGPPPPPRGGDLMAYDRRGRPGDRYDGMVGFSADETWDSAIDTWSPS 333
Query: 529 -LSMGDSPYGSMSSYSSKLYGGLP-------PPLTLEVLVPANAVGKVIGKAGSNLANIR 580
M P G S Y GG P +T +V +P + G +IGK G + IR
Sbjct: 334 EWQMAYEPQGG-SGYDYSYAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIR 392
Query: 581 KISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQ 618
SGA+I++ + DR+ I+GT +Q + A+ L+Q
Sbjct: 393 HESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQ 430
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 84/188 (44%), Gaps = 22/188 (11%)
Query: 28 KDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIY 87
K + +E V RIL G+VIGK GK I ++R + A V V D +R+++I
Sbjct: 34 KRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPD--SSGPERILSIS 91
Query: 88 SHVKDKEDV------EVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKE- 140
+ ++ ++ +++ P +Q L ++AV K + +
Sbjct: 92 ADIETIGEILKKIIPTLEEGLQLPSPTATSQLPLE------SDAVECLNYQHYKGSDFDC 145
Query: 141 ECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGE 200
E ++L+ S + IIG GA IK LR T+T+IK+ C D VLI G+
Sbjct: 146 ELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLF-------QECCPQSTDRVVLIGGK 198
Query: 201 SEAVKKAL 208
+ V + +
Sbjct: 199 PDRVVECI 206
Score = 45.8 bits (107), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 33/50 (66%)
Query: 37 VIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTI 86
+ ++ P + GS+IGK G+ I IR E+ A +K+ +P G++DR++TI
Sbjct: 366 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITI 415
>gi|452978145|gb|EME77909.1| hypothetical protein MYCFIDRAFT_63821 [Pseudocercospora fijiensis
CIRAD86]
Length = 480
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 90/373 (24%), Positives = 156/373 (41%), Gaps = 81/373 (21%)
Query: 304 QSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESP 363
+S L +R + + VIGKGG + IR+ +GA+ V + E ++TV+
Sbjct: 113 ESNWLHVRAIISSAEAATVIGKGGENVTQIRRLAGAKCTVSEYTRGAVERILTVSG---- 168
Query: 364 DDIKSMAVEAVLLLQTKINDE--------DDDTVTIRLLVSSKVIGCIIGKSGSIINEIR 415
+ ++A L+++T +N E T +RLL+ +IG IIGK G I EI+
Sbjct: 169 -HVDAVAKAFGLIIRT-LNQEPLEQASTPQSKTYPLRLLIPHILIGSIIGKQGVRIREIQ 226
Query: 416 KRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPP 475
+ + A + S+ P + + LV V+G +V A + L + L DR G P
Sbjct: 227 EASGARLNASESCLPLSTERS--LV-VLGVADAVHIATYYVGSTLVEQ-LTDRFGG---P 279
Query: 476 VGADH-------------------IYSSGTGISM------------PPLLPSIPPVGPLG 504
+++ TG M PP P+ P
Sbjct: 280 AASNYAGRHGGPQGVVPGGMQVVPYVPQNTGGQMGHPDNFRKHSNGPPRTPANP------ 333
Query: 505 YDQRADSGSGIGMLSSSSLYGYGSLS----------MGDSPYGSMSSYSSKLYGGLP--- 551
Y Q G ++ YG+ S PYG + S+ + G P
Sbjct: 334 YGQPYMHGQPPQQHPQQPMH-YGAASPRAPYVGAGPQQPQPYGHAA--PSQAHAGPPQQP 390
Query: 552 -------PPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALIS 604
P+T ++ +P + VG +IGK G+ + IR++SG+ I++++ + + +R+ I+
Sbjct: 391 VQGMVPGQPITQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQDNNNERLVTIT 450
Query: 605 GTPEQKRAAENLI 617
GT E + A ++
Sbjct: 451 GTQECNQMALYML 463
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 54/96 (56%), Gaps = 9/96 (9%)
Query: 296 VSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVI 355
V G+V + + ++ P + +G +IGKGG I IRQ SG+ I +++ +DN +E ++
Sbjct: 391 VQGMV---PGQPITQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQDNNNERLV 447
Query: 356 TVTAIESPDDIKSMAVEAVLLLQTKINDEDDDTVTI 391
T+T + + + A+ +L +++ + ++ +I
Sbjct: 448 TITGTQECNQM------ALYMLYSRLGESSKNSNSI 477
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 33/52 (63%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTI 86
+ + +I P+ ++G++IGK G IN IRQ + + +K+ +P +R+VTI
Sbjct: 398 QPITQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQDNNNERLVTI 449
>gi|296491333|tpg|DAA33396.1| TPA: insulin-like growth factor 2 mRNA binding protein 2 isoform 2
[Bos taurus]
Length = 556
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 71/322 (22%), Positives = 140/322 (43%), Gaps = 62/322 (19%)
Query: 301 GASQSEEL--VIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
G+SQ+ ++ +R+L P +G +IGK G TIK+I + + +++D+ K+N VT
Sbjct: 185 GSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDI-HRKENSGAAEKPVT 243
Query: 359 AIESPDDIKSMAVEAVLLLQTKINDEDD--DTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
+P+ S A +L + K DE + + +++L + ++G +IGK G + +I
Sbjct: 244 IHATPEGT-SEACRMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEH 302
Query: 417 RTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPV 476
T + IS + + + V G V + +A ++I+ +LR+ D
Sbjct: 303 ETGTKITISSLQDLSIYNP-ERTITVKGTVEACANAEIEIMKKLREAFEND--------- 352
Query: 477 GADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPY 536
ML+ ++ GY S +
Sbjct: 353 ----------------------------------------MLAVNTHSGYFSSLYPPHQF 372
Query: 537 GSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS-S 595
G + S P + + +P AVG +IGK G+++ + + +GA+I+++ ++
Sbjct: 373 GPFPHHHS-----YPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPD 427
Query: 596 RGDRVALISGTPEQKRAAENLI 617
+R+ +I+G PE + A+ I
Sbjct: 428 VSERMVIITGPPEAQFKAQGRI 449
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 101/218 (46%), Gaps = 23/218 (10%)
Query: 27 EKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKV---VDPFPGAKDRV 83
E DE E + +IL +G++G +IGK G+ + I ET ++ + D +R
Sbjct: 265 EADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERT 324
Query: 84 VTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKV--HAAIANAVANATD-----NDKKR 136
+T+ V+ + E++ +E A ++ +L V H+ +++ +
Sbjct: 325 ITVKGTVEACANAEIEIMKKLRE---AFENDMLAVNTHSGYFSSLYPPHQFGPFPHHHSY 381
Query: 137 KEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVL 196
E+E + +P+ IIGK GA IK+L SIK+ P + + + + V+
Sbjct: 382 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVS-------ERMVI 434
Query: 197 ISGESEAVKKALFAISAIMYK---FSPREDIPLETTVR 231
I+G EA KA I + + F+P+E++ LE +R
Sbjct: 435 ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIR 472
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 80/357 (22%), Positives = 145/357 (40%), Gaps = 62/357 (17%)
Query: 142 CQILVPSSQSANIIGKAGATIKRLRSKTRT-----------------SIKVTPKDASEPT 184
+ILVP+ IIGK G TIK + +T++ +I TP+ SE
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTSE-- 253
Query: 185 HSCAMEFDNFVLISGESEAVKKA------LFAISAIMYKFSPREDIPLETTVREAPPSII 238
+C M + ++ E++ K A + A + ++ + +E L+ E I
Sbjct: 254 -ACRMILE---IMQKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKIT 309
Query: 239 IPS--DVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQGYADTG-NTWPVYSTGLSL 295
I S D+ IY N + + + A + ++ + N +T
Sbjct: 310 ISSLQDLSIY-------NPERTITVKGTVEACANAEIEIMKKLREAFENDMLAVNTHSGY 362
Query: 296 VSGLVGASQS----------EELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDD 345
S L Q E+ ++ + P +G +IGK G IK + + +GA I +
Sbjct: 363 FSSLYPPHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAP 422
Query: 346 TK--DNRDECVITVTAIESPDDIKSMA---VEAVLLLQTKINDEDDDTVTIRLLVSSKVI 400
+ D + VI I P + + A + L + N +++ + + V S
Sbjct: 423 AEGPDVSERMVI----ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTA 478
Query: 401 GCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDE-LVEVVGEVGSVRDALVQI 456
G +IGK G +NE++ T A+V + + P D N+E +V ++G + + A +I
Sbjct: 479 GRVIGKGGKTVNELQNLTSAEVIVPRDQTP---DENEEVIVRIIGHFFASQTAQRKI 532
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 58/148 (39%), Gaps = 24/148 (16%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPF-PGAKDRVVTIYSHVKDK 93
E I + P +G++IGK G I + + A +K+ P +R+V I
Sbjct: 383 EQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII------- 435
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
+A K I + + K + K E I VPSS +
Sbjct: 436 ---------------TGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGR 480
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+IGK G T+ L++ T + + P+D +
Sbjct: 481 VIGKGGKTVNELQNLTSAEV-IVPRDQT 507
>gi|410899813|ref|XP_003963391.1| PREDICTED: poly(rC)-binding protein 4-like [Takifugu rubripes]
Length = 447
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 87/355 (24%), Positives = 157/355 (44%), Gaps = 77/355 (21%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
L +R+L ++G +IGK G T+K IR+ S A++++ + + E +IT+T S D +
Sbjct: 16 LTLRLLMHGKEVGSIIGKKGETVKRIREESSARVNISE--GSCPERIITITG--STDCV- 70
Query: 368 SMAVEAVLLLQTKINDE-----------DDDTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
A ++ K+ ++ VT+RL++ + G +IGK G+ I EIR+
Sbjct: 71 ---FRAFTMITHKLEEDLAALVANGTISTKPPVTLRLVIPASQCGSLIGKGGAKIKEIRE 127
Query: 417 RTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPV 476
T A ++++ P ++ + V + G +D+++Q + + L+ +PP
Sbjct: 128 STGAQIQVAGDLLP---NSTERGVTISGN----QDSVIQCVKLICTVILE------SPPK 174
Query: 477 GADHIYSSGTGISMPPLLPSIPPVGPL-GYDQRADSGSGIGMLSSSSLY--GYGSLSMGD 533
GA P PS P L +Q D+ ++ +Y G L +
Sbjct: 175 GATI-----------PYRPSPSPAAVLIAGNQLFDASE----FATHPMYSVAQGGLDLQQ 219
Query: 534 S-----PYGSMSSYSSKLY-----GGLPP-----------------PLTLEVLVPANAVG 566
+ YG S +KL+ GL P + E+L+P + +G
Sbjct: 220 AYTLQNQYGIPHSELAKLHQLSMQQGLNPIAQPASTVIPAGMDSNSQTSQELLIPNDLIG 279
Query: 567 KVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFI 621
+IG+ G+ + IR++SGA I++ DR I+GTP A+ LI + +
Sbjct: 280 SIIGRQGTKINEIRQVSGAQIKIGSQLDGTSDRHVTITGTPVSINLAQYLITSCL 334
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 90/349 (25%), Positives = 154/349 (44%), Gaps = 52/349 (14%)
Query: 27 EKD--EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVV 84
E+D E G ++ R+L +GS+IGK G+ + IR+E+ ARV + + +R++
Sbjct: 4 EQDFGEGGLGVTLTLRLLMHGKEVGSIIGKKGETVKRIREESSARVNISEG--SCPERII 61
Query: 85 TIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQI 144
TI D F A K+ +A VAN T + K ++
Sbjct: 62 TITG--------STDCVFR------AFTMITHKLEEDLAALVANGTISTKP---PVTLRL 104
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAV 204
++P+SQ ++IGK GA IK +R T I+V T + V ISG ++V
Sbjct: 105 VIPASQCGSLIGKGGAKIKEIRESTGAQIQVAGDLLPNST-------ERGVTISGNQDSV 157
Query: 205 KKALFAISAIMYKFSPR-EDIPLETTVREAPPSIIIP-------SDVPIYPPGGLYPNAD 256
+ + I ++ + P+ IP + +P +++I S+ +P +Y A
Sbjct: 158 IQCVKLICTVILESPPKGATIPYRPS--PSPAAVLIAGNQLFDASEFATHP---MYSVAQ 212
Query: 257 PILPSRSVPSILGAARVPD-----LQGYADTGNTWPVYSTGLSLV-SGLVGASQ-SEELV 309
L + ++ +P L + P+ +++ +G+ SQ S+EL+
Sbjct: 213 GGLDLQQAYTLQNQYGIPHSELAKLHQLSMQQGLNPIAQPASTVIPAGMDSNSQTSQELL 272
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
I P + IG +IG+ G I IRQ SGAQI + D + +T+T
Sbjct: 273 I----PNDLIGSIIGRQGTKINEIRQVSGAQIKIGSQLDGTSDRHVTIT 317
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 46/92 (50%), Gaps = 9/92 (9%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+T+RLL+ K +G IIGK G + IR+ + A V IS+G P + ++ + G
Sbjct: 15 TLTLRLLMHGKEVGSIIGKKGETVKRIREESSARVNISEGSCP------ERIITITGSTD 68
Query: 448 SVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
V A I +L +D + + S PPV
Sbjct: 69 CVFRAFTMITHKLEEDLAALVANGTISTKPPV 100
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 552 PPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMS-DSKSSRGDRVALISGTPEQK 610
PP+TL +++PA+ G +IGK G+ + IR+ +GA I+++ D + +R ISG +
Sbjct: 98 PPVTLRLVIPASQCGSLIGKGGAKIKEIRESTGAQIQVAGDLLPNSTERGVTISGNQDSV 157
Query: 611 RAAENLIQAFIM 622
LI I+
Sbjct: 158 IQCVKLICTVIL 169
>gi|109042331|ref|XP_001095005.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 2 [Macaca mulatta]
gi|402860701|ref|XP_003894761.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 2 [Papio anubis]
Length = 556
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 71/322 (22%), Positives = 137/322 (42%), Gaps = 62/322 (19%)
Query: 301 GASQSEE--LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
G SQ+ + +R+L P +G +IGK G TIK+I + + +++D+ K+N VT
Sbjct: 185 GTSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDI-HRKENSGAAEKPVT 243
Query: 359 AIESPDDIKSMAVEAVLLLQTKINDEDD--DTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
+P+ S A +L + K DE + + +++L + ++G +IGK G + +I
Sbjct: 244 IHATPEGT-SEACRMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEH 302
Query: 417 RTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPV 476
T + IS + + + V G V + A ++I+ +LR+ D
Sbjct: 303 ETGTKITISSLQDLSIYNP-ERTITVKGTVEACASAEIEIMKKLREAFEND--------- 352
Query: 477 GADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPY 536
ML+ ++ GY S +
Sbjct: 353 ----------------------------------------MLAVNTHSGYFSSLYPHHQF 372
Query: 537 GSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS-S 595
G + S P + + +P AVG +IGK G+++ + + +GA+I+++ ++
Sbjct: 373 GPFPHHHS-----YPEQEVVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPD 427
Query: 596 RGDRVALISGTPEQKRAAENLI 617
+R+ +I+G PE + A+ I
Sbjct: 428 VSERMVIITGPPEAQFKAQGRI 449
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 100/218 (45%), Gaps = 23/218 (10%)
Query: 27 EKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKV---VDPFPGAKDRV 83
E DE E + +IL +G++G +IGK G+ + I ET ++ + D +R
Sbjct: 265 EADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERT 324
Query: 84 VTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKV--HAAIANAVANATD-----NDKKR 136
+T+ V+ E++ +E A ++ +L V H+ +++ +
Sbjct: 325 ITVKGTVEACASAEIEIMKKLRE---AFENDMLAVNTHSGYFSSLYPHHQFGPFPHHHSY 381
Query: 137 KEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVL 196
E+E + +P+ IIGK GA IK+L SIK+ P + + + + V+
Sbjct: 382 PEQEVVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVS-------ERMVI 434
Query: 197 ISGESEAVKKALFAISAIMYK---FSPREDIPLETTVR 231
I+G EA KA I + + F+P+E++ LE +R
Sbjct: 435 ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIR 472
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 81/357 (22%), Positives = 146/357 (40%), Gaps = 62/357 (17%)
Query: 142 CQILVPSSQSANIIGKAGATIKRLRSKTRT-----------------SIKVTPKDASEPT 184
+ILVP+ IIGK G TIK + +T++ +I TP+ SE
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTSE-- 253
Query: 185 HSCAMEFDNFVLISGESEAVKKA------LFAISAIMYKFSPREDIPLETTVREAPPSII 238
+C M + ++ E++ K A + A + ++ + +E L+ E I
Sbjct: 254 -ACRMILE---IMQKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKIT 309
Query: 239 IPS--DVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQGYADTG-NTWPVYSTGLSL 295
I S D+ IY N + + + +A + ++ + N +T
Sbjct: 310 ISSLQDLSIY-------NPERTITVKGTVEACASAEIEIMKKLREAFENDMLAVNTHSGY 362
Query: 296 VSGLVGASQS----------EELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDD 345
S L Q E+ V+ + P +G +IGK G IK + + +GA I +
Sbjct: 363 FSSLYPHHQFGPFPHHHSYPEQEVVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAP 422
Query: 346 TK--DNRDECVITVTAIESPDDIKSMA---VEAVLLLQTKINDEDDDTVTIRLLVSSKVI 400
+ D + VI I P + + A + L + N +++ + + V S
Sbjct: 423 AEGPDVSERMVI----ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTA 478
Query: 401 GCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDE-LVEVVGEVGSVRDALVQI 456
G +IGK G +NE++ T A+V + + P D N+E +V ++G + + A +I
Sbjct: 479 GRVIGKGGKTVNELQNLTSAEVIVPRDQTP---DENEEVIVRIIGHFFASQTAQRKI 532
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 58/148 (39%), Gaps = 24/148 (16%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPF-PGAKDRVVTIYSHVKDK 93
E + + P +G++IGK G I + + A +K+ P +R+V I
Sbjct: 383 EQEVVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII------- 435
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
+A K I + + K + K E I VPSS +
Sbjct: 436 ---------------TGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGR 480
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+IGK G T+ L++ T + + P+D +
Sbjct: 481 VIGKGGKTVNELQNLTSAEV-IVPRDQT 507
>gi|301767224|ref|XP_002919001.1| PREDICTED: poly(rC)-binding protein 4-like isoform 2 [Ailuropoda
melanoleuca]
Length = 360
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 118/265 (44%), Gaps = 38/265 (14%)
Query: 384 EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVV 443
E T+T+R+L+ K +G IIGK G + IR+++ A + IS+G P + + +
Sbjct: 13 ELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCP------ERITTIT 66
Query: 444 GEVGSVRDALVQIILRLRDDALKDRDGSRN---PPVG----------ADHIYSSGTGI-- 488
G +V A+ I +L +D N PPV I +GT I
Sbjct: 67 GSTAAVFHAVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKE 126
Query: 489 --SMPPLLPSIP--PVGPLGY-----DQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSM 539
PP +IP P LG +Q G ++ + + LS P+ S
Sbjct: 127 IRESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASP 186
Query: 540 SSYSSKLYGGLPPPL---TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSR 596
S + GL P + E LVP + +G VIG+ GS ++ IR++SGA I++ +
Sbjct: 187 S-----MVPGLDPGAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGA 241
Query: 597 GDRVALISGTPEQKRAAENLIQAFI 621
G+R I+G+P A+ LI A +
Sbjct: 242 GERHVTITGSPVSIALAQYLITACL 266
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 120/323 (37%), Gaps = 90/323 (27%)
Query: 36 SVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKED 95
++ R+L +GS+IGK G+ + IR+++ AR+ + + +R+ TI
Sbjct: 17 TLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE--GSCPERITTITGSTAAVFH 74
Query: 96 VEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANII 155
F E LCAA + + ++++P+SQ ++I
Sbjct: 75 AVSMIAFKLDEDLCAA-----------------PANGGNVSRPPVTLRLVIPASQCGSLI 117
Query: 156 GKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIM 215
GKAG IK +R PK A+ P H ++ +L + + +V+ A+
Sbjct: 118 GKAGTKIKEIRES-------PPKGATIPYHP-SLSLGTVLLSANQGFSVQGQYGAV---- 165
Query: 216 YKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPD 275
+P E L+ A P PS VP GL P A
Sbjct: 166 ---TPAEVTKLQQLSGHAVP-FASPSMVP-----GLDPGAQ------------------- 197
Query: 276 LQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQ 335
+ S+E ++ P + IG VIG+ G I IRQ
Sbjct: 198 ---------------------------TSSQEFLV----PNDLIGCVIGRQGSKISEIRQ 226
Query: 336 ASGAQIDVDDTKDNRDECVITVT 358
SGA I + + + E +T+T
Sbjct: 227 MSGAHIKIGNQAEGAGERHVTIT 249
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 79/173 (45%), Gaps = 24/173 (13%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
L +R+L ++G +IGK G T+K IR+ S A+I + + + E + T+T
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE--GSCPERITTITG------ST 69
Query: 368 SMAVEAVLLLQTKINDED------------DDTVTIRLLVSSKVIGCIIGKSGSIINEIR 415
+ AV ++ K+ DED VT+RL++ + G +IGK+G+ I EIR
Sbjct: 70 AAVFHAVSMIAFKL-DEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIR 128
Query: 416 KRTKADVRISKGDKPKCAD---ANDELVEVVGEVGSVRDALVQIILRLRDDAL 465
+ I + ++ V G+ G+V A V + +L A+
Sbjct: 129 ESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAV 181
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 80/179 (44%), Gaps = 22/179 (12%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQA--SGAQIDVDDT--------KDNRDECVITV 357
+ +R++ P ++ G +IGK G IK IR++ GA I + N+ V
Sbjct: 102 VTLRLVIPASQCGSLIGKAGTKIKEIRESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQ 161
Query: 358 TAIESPDDI---KSMAVEAVLLLQTKIN---DEDDDTVTIRLLVSSKVIGCIIGKSGSII 411
+P ++ + ++ AV + D T + LV + +IGC+IG+ GS I
Sbjct: 162 YGAVTPAEVTKLQQLSGHAVPFASPSMVPGLDPGAQTSSQEFLVPNDLIGCVIGRQGSKI 221
Query: 412 NEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDG 470
+EIR+ + A ++I + A + V + G S+ AL Q ++ + K G
Sbjct: 222 SEIRQMSGAHIKIGN----QAEGAGERHVTITGSPVSI--ALAQYLITACLETAKSTSG 274
>gi|327263854|ref|XP_003216732.1| PREDICTED: poly(rC)-binding protein 2-like isoform 2 [Anolis
carolinensis]
Length = 331
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 156/336 (46%), Gaps = 36/336 (10%)
Query: 297 SGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVIT 356
+G++ + L IR+L ++G +IGK G ++K +R+ SGA+I++ + N E +IT
Sbjct: 3 TGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIIT 60
Query: 357 VTAIESPDDIKSMAVEAVL-LLQTKINDEDDDT-------VTIRLLVSSKVIGCIIGKSG 408
+ P + A ++ L+ I+ ++ VT+RL+V + G +IGK G
Sbjct: 61 LAG---PTNAIFKAFAMIIDKLEEDISSSMTNSTASSRPPVTLRLVVPASQCGSLIGKGG 117
Query: 409 SIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDR 468
I EIR+ T A V+++ P ++ + + + G S+ + + QI + + + K
Sbjct: 118 CKIKEIRESTGAQVQVAGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLESPPKGV 174
Query: 469 DGSRNP-PVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYG 527
P P + I++ G ++ +IP Q A S +
Sbjct: 175 TIPYRPKPSSSPVIFAGGQAYTIQGQY-AIPQPDLTKLHQLAMQQS------------HF 221
Query: 528 SLSMGDSPYGSMSSYS---SKLYGGL---PPPLTLEVLVPANAVGKVIGKAGSNLANIRK 581
+S G++ + + S S + GL + E+ +P + +G +IG+ G+ + IR+
Sbjct: 222 PMSHGNTGFSGVESSSPDEKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQ 281
Query: 582 ISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLI 617
+SGA I++++ DR I+G+ A+ LI
Sbjct: 282 MSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLI 317
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 84/353 (23%), Positives = 149/353 (42%), Gaps = 77/353 (21%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH 89
E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R++T
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIIT---- 60
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAV-----ANATDNDKKRKEKEECQI 144
L +A+ K A I + + ++ T++ + ++
Sbjct: 61 ------------------LAGPTNAIFKAFAMIIDKLEEDISSSMTNSTASSRPPVTLRL 102
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAV 204
+VP+SQ ++IGK G IK +R T ++V T + + I+G +++
Sbjct: 103 VVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNST-------ERAITIAGIPQSI 155
Query: 205 KKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSV 264
+ + I +M + P+ T+ P PS P+ GG A I ++
Sbjct: 156 IECVKQICVVMLESPPK-----GVTIPYRPK----PSSSPVIFAGG---QAYTIQGQYAI 203
Query: 265 PSILGAARVPD---LQGYADTGNTWPVY--STGLSLV-----------SGLVGASQ--SE 306
P PD L A + +P+ +TG S V +GL ++Q S
Sbjct: 204 PQ-------PDLTKLHQLAMQQSHFPMSHGNTGFSGVESSSPDEKGYWAGLDASAQTTSH 256
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTA 359
EL I P + IG +IG+ G I IRQ SGAQI + + + + +T+T
Sbjct: 257 ELTI----PNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITG 305
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 7/65 (10%)
Query: 29 DEKG-------NEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKD 81
DEKG + ++ + + P+ +IG +IG+ G IN IRQ + A++K+ +P G+ D
Sbjct: 239 DEKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTD 298
Query: 82 RVVTI 86
R VTI
Sbjct: 299 RQVTI 303
>gi|426217762|ref|XP_004003121.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 2 [Ovis aries]
Length = 556
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 71/322 (22%), Positives = 140/322 (43%), Gaps = 62/322 (19%)
Query: 301 GASQSEEL--VIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
G+SQ+ ++ +R+L P +G +IGK G TIK+I + + +++D+ K+N VT
Sbjct: 185 GSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDI-HRKENSGAAEKPVT 243
Query: 359 AIESPDDIKSMAVEAVLLLQTKINDEDD--DTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
+P+ S A +L + K DE + + +++L + ++G +IGK G + +I
Sbjct: 244 IHATPEGT-SEACRMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEH 302
Query: 417 RTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPV 476
T + IS + + + V G V + A ++I+ +LR+ D
Sbjct: 303 ETGTKITISSLQDLSIYNP-ERTITVKGTVEACASAEIEIMKKLREAFEND--------- 352
Query: 477 GADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPY 536
ML++++ GY S +
Sbjct: 353 ----------------------------------------MLAANTHSGYFSSLCPPHQF 372
Query: 537 GSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS-S 595
G + S P + + +P AVG +IGK G+++ + + +GA+I+++ ++
Sbjct: 373 GPFPHHHS-----YPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPD 427
Query: 596 RGDRVALISGTPEQKRAAENLI 617
+R+ +I+G PE + A+ I
Sbjct: 428 VSERMVIITGPPEAQFKAQGRI 449
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 99/218 (45%), Gaps = 23/218 (10%)
Query: 27 EKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKV---VDPFPGAKDRV 83
E DE E + +IL +G++G +IGK G+ + I ET ++ + D +R
Sbjct: 265 EADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERT 324
Query: 84 VTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALL--KVHAAIANAVANATD-----NDKKR 136
+T+ V+ E++ +E A ++ +L H+ +++ +
Sbjct: 325 ITVKGTVEACASAEIEIMKKLRE---AFENDMLAANTHSGYFSSLCPPHQFGPFPHHHSY 381
Query: 137 KEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVL 196
E+E + +P+ IIGK GA IK+L SIK+ P + + + + V+
Sbjct: 382 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVS-------ERMVI 434
Query: 197 ISGESEAVKKALFAISAIMYK---FSPREDIPLETTVR 231
I+G EA KA I + + F+P+E++ LE +R
Sbjct: 435 ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIR 472
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 80/357 (22%), Positives = 146/357 (40%), Gaps = 62/357 (17%)
Query: 142 CQILVPSSQSANIIGKAGATIKRLRSKTRT-----------------SIKVTPKDASEPT 184
+ILVP+ IIGK G TIK + +T++ +I TP+ SE
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTSE-- 253
Query: 185 HSCAMEFDNFVLISGESEAVKKA------LFAISAIMYKFSPREDIPLETTVREAPPSII 238
+C M + ++ E++ K A + A + ++ + +E L+ E I
Sbjct: 254 -ACRMILE---IMQKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKIT 309
Query: 239 IPS--DVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQGYADT-------GNTWPVY 289
I S D+ IY N + + + +A + ++ + NT Y
Sbjct: 310 ISSLQDLSIY-------NPERTITVKGTVEACASAEIEIMKKLREAFENDMLAANTHSGY 362
Query: 290 STGLSLVSGL----VGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDD 345
+ L S E+ ++ + P +G +IGK G IK + + +GA I +
Sbjct: 363 FSSLCPPHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAP 422
Query: 346 TK--DNRDECVITVTAIESPDDIKSMA---VEAVLLLQTKINDEDDDTVTIRLLVSSKVI 400
+ D + VI I P + + A + L + N +++ + + V S
Sbjct: 423 AEGPDVSERMVI----ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTA 478
Query: 401 GCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDE-LVEVVGEVGSVRDALVQI 456
G +IGK G +NE++ T A+V + + P D N+E +V ++G + + A +I
Sbjct: 479 GRVIGKGGKTVNELQNLTSAEVIVPRDQTP---DENEEVIVRIIGHFFASQTAQRKI 532
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 58/148 (39%), Gaps = 24/148 (16%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPF-PGAKDRVVTIYSHVKDK 93
E I + P +G++IGK G I + + A +K+ P +R+V I
Sbjct: 383 EQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII------- 435
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
+A K I + + K + K E I VPSS +
Sbjct: 436 ---------------TGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGR 480
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+IGK G T+ L++ T + + P+D +
Sbjct: 481 VIGKGGKTVNELQNLTSAEV-IVPRDQT 507
>gi|413935392|gb|AFW69943.1| hypothetical protein ZEAMMB73_108333 [Zea mays]
Length = 397
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 146/339 (43%), Gaps = 53/339 (15%)
Query: 298 GLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTK--DNRDECVI 355
G GAS V R++ P +K+G +IG+ G TIK + + A++ V D D ++
Sbjct: 93 GWPGAS-----VFRLVVPADKVGGIIGRRGDTIKRLCDETRARVRVLDAPHGDGAFSRIV 147
Query: 356 TVTAIESPDDIKSMAVEAVLLLQTKINDEDD------------DTVTIRLLVSSKVIGCI 403
V+A E + S A+ A + + IN+ +D + ++RLLV +
Sbjct: 148 LVSAREEVEAELSPAMNAAIKIFKHINEIEDINSDGTLMAPAPEISSVRLLVPFAQALHV 207
Query: 404 IGKSGSIINEIRKRTKADVRISKGDKPKCADANDE-LVEVVGEVGSVRDALVQIILRLRD 462
IGK G I I++ T + VRI D+ + E +VE+ G V +AL +++L L
Sbjct: 208 IGKQGVTIKSIQESTGSTVRIMDEDELLSHETMGERIVEINGASLEVLNAL-KLVLGLLR 266
Query: 463 DALKDRDGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSS 522
L D G H++ P + G+ G S
Sbjct: 267 KFLVDH--------GVLHLFERKN---------------PEVAQPQQSRGNPKG-----S 298
Query: 523 LYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKI 582
+ YG +PY S S+ L +T + +P VG++IG G N+ IR +
Sbjct: 299 RFLYGHDPSFHAPY---SRDLSQPADSLITKITRTMQIPLADVGEIIGVRGENVELIRSV 355
Query: 583 SGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFI 621
SGA + + + + RV +I GTP Q + A L+Q +
Sbjct: 356 SGAVVVLEKIGNGQEVRV-MIEGTPSQVQTAHQLVQVLV 393
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 95/186 (51%), Gaps = 21/186 (11%)
Query: 38 IYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVD-PF-PGAKDRVVTIYSHVKDKED 95
++R++ P +G +IG+ G I + ETRARV+V+D P GA R+V + + +E+
Sbjct: 99 VFRLVVPADKVGGIIGRRGDTIKRLCDETRARVRVLDAPHGDGAFSRIVLVSA----REE 154
Query: 96 VEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRK---EKEECQILVPSSQSA 152
VE + L A +A +K+ I N + + + E ++LVP +Q+
Sbjct: 155 VEAE--------LSPAMNAAIKIFKHI-NEIEDINSDGTLMAPAPEISSVRLLVPFAQAL 205
Query: 153 NIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAIS 212
++IGK G TIK ++ T +++++ +D +H E V I+G S V AL +
Sbjct: 206 HVIGKQGVTIKSIQESTGSTVRIMDEDELL-SHETMGE--RIVEINGASLEVLNALKLVL 262
Query: 213 AIMYKF 218
++ KF
Sbjct: 263 GLLRKF 268
>gi|154281643|ref|XP_001541634.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150411813|gb|EDN07201.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 482
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 89/356 (25%), Positives = 154/356 (43%), Gaps = 66/356 (18%)
Query: 304 QSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESP 363
+S + IR + + IGKGG + IR+ SGA+ V D E ++TV+ ++
Sbjct: 133 ESGWIHIRAVISSAEAATCIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSGMQD- 191
Query: 364 DDIKSMAVEAVLLLQTKINDE--------DDDTVTIRLLVSSKVIGCIIGKSGSIINEIR 415
+A L+ +N+E T +RLL+ +IG IIGKSG I EI+
Sbjct: 192 -----AVAKAFGLIIRTLNNEPLEAPSTAQSKTYPLRLLIPHLLIGSIIGKSGVRIREIQ 246
Query: 416 KRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPP 475
+ + A + S P + + + ++G +V A + + L + L +R G P
Sbjct: 247 EASGARLNASDSCLPL---STERTLVILGVADAVHIATYYVAVTLVEQ-LTERFGG---P 299
Query: 476 VGADHIYSSGTG-------ISMPPLLPSIPPVGPLGY----------DQRADSGSGIGM- 517
+ + SG + + P +P P G G+ R S G G+
Sbjct: 300 AASAYATRSGGAAGVVPGGMQVVPYVPQ-PAGGQYGHPDTFKRHQPPGNRVVSTGGYGVP 358
Query: 518 -----------------LSSSSLYGY-GSLSMGDSPYGS------MSSYSSKLYGGLPP- 552
SSS GY G+ +PYG+ S++ GG+ P
Sbjct: 359 YVHGQPGQPQMPHQALHYGSSSRPGYSGAGPHQPAPYGAPQPAPVHGGPSAQPAGGVVPG 418
Query: 553 -PLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTP 607
P+T ++ +P + VG +IGK G+ + IR +SG+ I++++ + + +R+ I+ P
Sbjct: 419 APVTQQIFIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQDNSNERLVTITVLP 474
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 34/53 (64%)
Query: 311 RVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESP 363
++ P + +G +IGKGG I IR SG+ I +++ +DN +E ++T+T + P
Sbjct: 424 QIFIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQDNSNERLVTITVLPYP 476
Score = 39.7 bits (91), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 32/50 (64%)
Query: 37 VIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTI 86
V +I P+ ++G++IGK G IN IR + + +K+ +P + +R+VTI
Sbjct: 421 VTQQIFIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQDNSNERLVTI 470
>gi|56118219|ref|NP_001007226.1| insulin-like growth factor 2 mRNA-binding protein 2 isoform b [Homo
sapiens]
gi|4883681|gb|AAD31596.1|AF057352_1 hepatocellular carcinoma autoantigen [Homo sapiens]
gi|119598615|gb|EAW78209.1| insulin-like growth factor 2 mRNA binding protein 2, isoform CRA_a
[Homo sapiens]
gi|410223072|gb|JAA08755.1| insulin-like growth factor 2 mRNA binding protein 2 [Pan
troglodytes]
gi|410251294|gb|JAA13614.1| insulin-like growth factor 2 mRNA binding protein 2 [Pan
troglodytes]
gi|410302888|gb|JAA30044.1| insulin-like growth factor 2 mRNA binding protein 2 [Pan
troglodytes]
gi|410342485|gb|JAA40189.1| insulin-like growth factor 2 mRNA binding protein 2 [Pan
troglodytes]
Length = 556
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/322 (22%), Positives = 137/322 (42%), Gaps = 62/322 (19%)
Query: 301 GASQSEE--LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
G SQ+ + +R+L P +G +IGK G TIK+I + + +++D+ K+N VT
Sbjct: 185 GTSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDI-HRKENSGAAEKPVT 243
Query: 359 AIESPDDIKSMAVEAVLLLQTKINDEDD--DTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
+P+ S A +L + K DE + + +++L + ++G +IGK G + +I
Sbjct: 244 IHATPEGT-SEACRMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEH 302
Query: 417 RTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPV 476
T + IS + + + V G V + A ++I+ +LR+ D
Sbjct: 303 ETGTKITISSLQDLSIYNP-ERTITVKGTVEACASAEIEIMKKLREAFEND--------- 352
Query: 477 GADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPY 536
ML+ ++ GY S +
Sbjct: 353 ----------------------------------------MLAVNTHSGYFSSLYPHHQF 372
Query: 537 GSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS-S 595
G + S P + + +P AVG +IGK G+++ + + +GA+I+++ ++
Sbjct: 373 GPFPHHHS-----YPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPD 427
Query: 596 RGDRVALISGTPEQKRAAENLI 617
+R+ +I+G PE + A+ I
Sbjct: 428 VSERMVIITGPPEAQFKAQGRI 449
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 100/218 (45%), Gaps = 23/218 (10%)
Query: 27 EKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKV---VDPFPGAKDRV 83
E DE E + +IL +G++G +IGK G+ + I ET ++ + D +R
Sbjct: 265 EADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERT 324
Query: 84 VTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKV--HAAIANAVANATD-----NDKKR 136
+T+ V+ E++ +E A ++ +L V H+ +++ +
Sbjct: 325 ITVKGTVEACASAEIEIMKKLRE---AFENDMLAVNTHSGYFSSLYPHHQFGPFPHHHSY 381
Query: 137 KEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVL 196
E+E + +P+ IIGK GA IK+L SIK+ P + + + + V+
Sbjct: 382 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVS-------ERMVI 434
Query: 197 ISGESEAVKKALFAISAIMYK---FSPREDIPLETTVR 231
I+G EA KA I + + F+P+E++ LE +R
Sbjct: 435 ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIR 472
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 80/357 (22%), Positives = 146/357 (40%), Gaps = 62/357 (17%)
Query: 142 CQILVPSSQSANIIGKAGATIKRLRSKTRT-----------------SIKVTPKDASEPT 184
+ILVP+ IIGK G TIK + +T++ +I TP+ SE
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTSE-- 253
Query: 185 HSCAMEFDNFVLISGESEAVKKA------LFAISAIMYKFSPREDIPLETTVREAPPSII 238
+C M + ++ E++ K A + A + ++ + +E L+ E I
Sbjct: 254 -ACRMILE---IMQKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKIT 309
Query: 239 IPS--DVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQGYADTG-NTWPVYSTGLSL 295
I S D+ IY N + + + +A + ++ + N +T
Sbjct: 310 ISSLQDLSIY-------NPERTITVKGTVEACASAEIEIMKKLREAFENDMLAVNTHSGY 362
Query: 296 VSGLVGASQS----------EELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDD 345
S L Q E+ ++ + P +G +IGK G IK + + +GA I +
Sbjct: 363 FSSLYPHHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAP 422
Query: 346 TK--DNRDECVITVTAIESPDDIKSMA---VEAVLLLQTKINDEDDDTVTIRLLVSSKVI 400
+ D + VI I P + + A + L + N +++ + + V S
Sbjct: 423 AEGPDVSERMVI----ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTA 478
Query: 401 GCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDE-LVEVVGEVGSVRDALVQI 456
G +IGK G +NE++ T A+V + + P D N+E +V ++G + + A +I
Sbjct: 479 GRVIGKGGKTVNELQNLTSAEVIVPRDQTP---DENEEVIVRIIGHFFASQTAQRKI 532
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 58/148 (39%), Gaps = 24/148 (16%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPF-PGAKDRVVTIYSHVKDK 93
E I + P +G++IGK G I + + A +K+ P +R+V I
Sbjct: 383 EQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII------- 435
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
+A K I + + K + K E I VPSS +
Sbjct: 436 ---------------TGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGR 480
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+IGK G T+ L++ T + + P+D +
Sbjct: 481 VIGKGGKTVNELQNLTSAEV-IVPRDQT 507
>gi|354490193|ref|XP_003507244.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Cricetulus
griseus]
Length = 331
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 157/336 (46%), Gaps = 36/336 (10%)
Query: 297 SGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVIT 356
+G++ + L IR+L ++G +IGK G ++K +R+ SGA+I++ + N E +IT
Sbjct: 3 TGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIIT 60
Query: 357 VTAIESPDDIKSMAVEAVL-LLQTKINDEDDDT-------VTIRLLVSSKVIGCIIGKSG 408
+ P + A ++ L+ I+ ++ VT+RL+V + G +IGK G
Sbjct: 61 LAG---PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGG 117
Query: 409 SIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDR 468
I EIR+ T A V+++ P ++ + + + G S+ + + QI + + + K
Sbjct: 118 CKIKEIRESTGAQVQVAGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLESPPKGV 174
Query: 469 DGSRNP-PVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYG 527
P P + I++ G ++ +IP Q A S +
Sbjct: 175 TIPYRPKPSSSPVIFAGGQAYTIQGQY-AIPQPDLTKLHQLAMQQS------------HF 221
Query: 528 SLSMGDSPYGSMSSYSSKL---YGGL---PPPLTLEVLVPANAVGKVIGKAGSNLANIRK 581
++ G++ + + S S ++ + GL + E+ +P + +G +IG+ G+ + IR+
Sbjct: 222 PMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQ 281
Query: 582 ISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLI 617
+SGA I+ ++ DR I+G+ A+ LI
Sbjct: 282 MSGAQIKTANPVEGSTDRQVTITGSAASISLAQYLI 317
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 148/352 (42%), Gaps = 77/352 (21%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH 89
E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R++T
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIIT---- 60
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAV-----ANATDNDKKRKEKEECQI 144
L +A+ K A I + + ++ T++ + ++
Sbjct: 61 ------------------LAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRL 102
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAV 204
+VP+SQ ++IGK G IK +R T ++V T + + I+G +++
Sbjct: 103 VVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNST-------ERAITIAGIPQSI 155
Query: 205 KKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSV 264
+ + I +M + P+ T+ P PS P+ GG A I ++
Sbjct: 156 IECVKQICVVMLESPPKG-----VTIPYRPK----PSSSPVIFAGG---QAYTIQGQYAI 203
Query: 265 PSILGAARVPDL---QGYADTGNTWPVY--STGLSLV-----------SGLVGASQ--SE 306
P PDL A + +P+ +TG S + +GL ++Q S
Sbjct: 204 PQ-------PDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSH 256
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
EL I P + IG +IG+ G I IRQ SGAQI + + + +T+T
Sbjct: 257 ELTI----PNDLIGCIIGRQGAKINEIRQMSGAQIKTANPVEGSTDRQVTIT 304
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 383 DEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEV 442
D T + L + + +IGCIIG+ G+ INEIR+ + A ++ + + D V +
Sbjct: 248 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKTAN----PVEGSTDRQVTI 303
Query: 443 VGEVGSVRDALVQIILRLRDD 463
G S+ A I +RL +
Sbjct: 304 TGSAASISLAQYLINVRLSSE 324
>gi|332215031|ref|XP_003256640.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 3 [Nomascus leucogenys]
Length = 556
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/322 (22%), Positives = 138/322 (42%), Gaps = 62/322 (19%)
Query: 301 GASQSEEL--VIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
G SQ+ ++ +R+L P +G +IGK G TIK+I + + +++D+ K+N VT
Sbjct: 185 GTSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDI-HRKENSGAAEKPVT 243
Query: 359 AIESPDDIKSMAVEAVLLLQTKINDEDD--DTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
+P+ S A +L + K DE + + +++L + ++G +IGK G + +I
Sbjct: 244 IHATPEGT-SEACRMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEH 302
Query: 417 RTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPV 476
T + IS + + + V G V + A ++I+ +LR+ D
Sbjct: 303 ETGTKITISSLQDLSIYNP-ERTITVKGTVEACASAEIEIMKKLREAFEND--------- 352
Query: 477 GADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPY 536
ML+ ++ GY S +
Sbjct: 353 ----------------------------------------MLAVNTHSGYFSSLYPHHQF 372
Query: 537 GSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS-S 595
G + S P + + +P AVG +IGK G+++ + + +GA+I+++ ++
Sbjct: 373 GPFPHHHS-----YPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPD 427
Query: 596 RGDRVALISGTPEQKRAAENLI 617
+R+ +I+G PE + A+ I
Sbjct: 428 VSERMVIITGPPEAQFKAQGRI 449
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 100/218 (45%), Gaps = 23/218 (10%)
Query: 27 EKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKV---VDPFPGAKDRV 83
E DE E + +IL +G++G +IGK G+ + I ET ++ + D +R
Sbjct: 265 EADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERT 324
Query: 84 VTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKV--HAAIANAVANATD-----NDKKR 136
+T+ V+ E++ +E A ++ +L V H+ +++ +
Sbjct: 325 ITVKGTVEACASAEIEIMKKLRE---AFENDMLAVNTHSGYFSSLYPHHQFGPFPHHHSY 381
Query: 137 KEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVL 196
E+E + +P+ IIGK GA IK+L SIK+ P + + + + V+
Sbjct: 382 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVS-------ERMVI 434
Query: 197 ISGESEAVKKALFAISAIMYK---FSPREDIPLETTVR 231
I+G EA KA I + + F+P+E++ LE +R
Sbjct: 435 ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIR 472
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 80/357 (22%), Positives = 146/357 (40%), Gaps = 62/357 (17%)
Query: 142 CQILVPSSQSANIIGKAGATIKRLRSKTRT-----------------SIKVTPKDASEPT 184
+ILVP+ IIGK G TIK + +T++ +I TP+ SE
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTSE-- 253
Query: 185 HSCAMEFDNFVLISGESEAVKKA------LFAISAIMYKFSPREDIPLETTVREAPPSII 238
+C M + ++ E++ K A + A + ++ + +E L+ E I
Sbjct: 254 -ACRMILE---IMQKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKIT 309
Query: 239 IPS--DVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQGYADTG-NTWPVYSTGLSL 295
I S D+ IY N + + + +A + ++ + N +T
Sbjct: 310 ISSLQDLSIY-------NPERTITVKGTVEACASAEIEIMKKLREAFENDMLAVNTHSGY 362
Query: 296 VSGLVGASQS----------EELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDD 345
S L Q E+ ++ + P +G +IGK G IK + + +GA I +
Sbjct: 363 FSSLYPHHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAP 422
Query: 346 TK--DNRDECVITVTAIESPDDIKSMA---VEAVLLLQTKINDEDDDTVTIRLLVSSKVI 400
+ D + VI I P + + A + L + N +++ + + V S
Sbjct: 423 AEGPDVSERMVI----ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTA 478
Query: 401 GCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDE-LVEVVGEVGSVRDALVQI 456
G +IGK G +NE++ T A+V + + P D N+E +V ++G + + A +I
Sbjct: 479 GRVIGKGGKTVNELQNLTSAEVIVPRDQTP---DENEEVIVRIIGHFFASQTAQRKI 532
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 58/148 (39%), Gaps = 24/148 (16%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPF-PGAKDRVVTIYSHVKDK 93
E I + P +G++IGK G I + + A +K+ P +R+V I
Sbjct: 383 EQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII------- 435
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
+A K I + + K + K E I VPSS +
Sbjct: 436 ---------------TGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGR 480
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+IGK G T+ L++ T + + P+D +
Sbjct: 481 VIGKGGKTVNELQNLTSAEV-IVPRDQT 507
>gi|45384194|ref|NP_990402.1| insulin-like growth factor 2 mRNA-binding protein 1 [Gallus gallus]
gi|82227598|sp|O42254.1|IF2B1_CHICK RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 1;
Short=IGF2 mRNA-binding protein 1; Short=IMP-1; AltName:
Full=IGF-II mRNA-binding protein 1; AltName: Full=VICKZ
family member 1; AltName: Full=Zip code-binding protein
1; Short=ZBP-1; Short=Zipcode-binding protein 1
gi|2570921|gb|AAB82295.1| zipcode-binding protein [Gallus gallus]
Length = 576
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 151/335 (45%), Gaps = 54/335 (16%)
Query: 292 GLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRD 351
G + +G Q ++ +R+L P +G +IGK G TI++I + + ++IDV K+N
Sbjct: 180 GSPVTAGAPVKQQPVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDV-HRKENAG 238
Query: 352 ECVITVTAIESPDDIKSMAVEAVLLLQTKIND-EDDDTVTIRLLVSSKVIGCIIGKSGSI 410
++ +P+ + + ++Q + D + D V +++L + +G +IGK G
Sbjct: 239 AAEKAISIHSTPEGCSAACKMILEIMQKEAKDTKTADEVPLKILAHNNFVGRLIGKEGRN 298
Query: 411 INEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDG 470
+ ++ + T+ + IS + + + V G + + A +I+ ++R+ D
Sbjct: 299 LKKVEQDTETKITISSLQDLTLYNP-ERTITVKGSIENCCKAEQEIMKKVREAYEND--- 354
Query: 471 SRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGML--SSSSLYGYGS 528
V A + S L+P + + + +G+ SS+++ S
Sbjct: 355 -----VAAMSLQSH--------LIPGL-------------NLAAVGLFPASSNAVPPPPS 388
Query: 529 LSMGDSPYGSMSSYSSKLYGGLPPPL-TLEVLVPANAVGKVIGKAGSNLANIRKISGATI 587
G +PY S +PP T+ V +PA AVG +IGK G ++ + + + A+I
Sbjct: 389 SVSGAAPYSSF----------MPPEQETVHVFIPAQAVGAIIGKKGQHIKQLSRFASASI 438
Query: 588 -----EMSDSKSSRGDRVALISGTPEQKRAAENLI 617
E DSK R+ +I+G PE + A+ I
Sbjct: 439 KIAPPETPDSKV----RMVVITGPPEAQFKAQGRI 469
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 95/437 (21%), Positives = 178/437 (40%), Gaps = 96/437 (21%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKEDVEV 98
R+L P +G++IGK G I +I ++T++++ V GA ++ ++I+S
Sbjct: 199 RLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISIHS---------- 248
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
E AA +L++ A D K ++ +IL ++ +IGK
Sbjct: 249 -----TPEGCSAACKMILEIMQKEAK--------DTKTADEVPLKILAHNNFVGRLIGKE 295
Query: 159 GATIKRLRSKTRTSIKVTP-KDAS--EPTHSCAMEFDNFVLISGESEAVKKALFAISAIM 215
G +K++ T T I ++ +D + P + ++ E E +KK A
Sbjct: 296 GRNLKKVEQDTETKITISSLQDLTLYNPERTITVKGSIENCCKAEQEIMKKVREAYE--- 352
Query: 216 YKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYP---NADPILPSRSVPSILGAAR 272
D+ + P + + + GL+P NA P PS S+ GAA
Sbjct: 353 ------NDVAAMSLQSHLIPGLNLAAV-------GLFPASSNAVPPPPS----SVSGAAP 395
Query: 273 VPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKS 332
YS+ + E+ + V P +G +IGK G IK
Sbjct: 396 ----------------YSSFMP----------PEQETVHVFIPAQAVGAIIGKKGQHIKQ 429
Query: 333 IRQASGAQIDVD--DTKDNRDECVITVTAIESPDDIKSMA---VEAVLLLQTKINDEDDD 387
+ + + A I + +T D++ V+ I P + + A + L + +++
Sbjct: 430 LSRFASASIKIAPPETPDSKVRMVV----ITGPPEAQFKAQGRIYGKLKEENFFGPKEEV 485
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDE-LVEVVGEV 446
+ + V + G +IGK G +NE++ T A+V + + P D N++ +V+++G
Sbjct: 486 KLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQTP---DENEQVIVKIIGHF 542
Query: 447 GS-------VRDALVQI 456
+ +RD L Q+
Sbjct: 543 YASQMAQRKIRDILAQV 559
Score = 42.7 bits (99), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 59/148 (39%), Gaps = 24/148 (16%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDP-FPGAKDRVVTIYSHVKDK 93
E + P +G++IGK G+ I + + A +K+ P P +K R+V I
Sbjct: 403 EQETVHVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVVI------- 455
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
+A K I + K + K E I VP+S +
Sbjct: 456 ---------------TGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGR 500
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+IGK G T+ L++ T + V P+D +
Sbjct: 501 VIGKGGKTVNELQNLTAAEV-VVPRDQT 527
>gi|363737066|ref|XP_003641794.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Gallus gallus]
Length = 564
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 148/322 (45%), Gaps = 42/322 (13%)
Query: 301 GASQSEEL--VIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
G+SQ ++L +R+L P +G +IGK G TIK++ + + +++D+ K+N +T
Sbjct: 172 GSSQPKQLDFPLRMLVPTQFVGAIIGKEGLTIKNLTKQTQSKVDIHR-KENAGAAEKPIT 230
Query: 359 AIESPDDIKSMAVEAVLLLQTKINDEDD--DTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
+P+ S A +L + K DE + + +++L + ++G +IGK G + +I +
Sbjct: 231 IHATPEGC-SEACRMILDIMQKEADETKSAEEIPLKILAHNSLVGRLIGKEGRNLKKIEQ 289
Query: 417 RTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPV 476
T + IS + + + V G + +A V+I+ +L R+ N V
Sbjct: 290 DTGTKITISPLQDLTIYNP-ERTITVKGSTEACSNAEVEIMKKL-------REAYENDIV 341
Query: 477 GADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPY 536
+ + G+++ L +G+ ML SS+ + + P+
Sbjct: 342 AVNQQANLIPGLNLSAL---------------GIFSTGLSMLPSSAGARGAAAAAPYHPF 386
Query: 537 GSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSR 596
LP + + +P AVG +IGK G ++ + + +GA+I+++ ++
Sbjct: 387 ------------ALPEQEVVNLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAEGPD 434
Query: 597 G-DRVALISGTPEQKRAAENLI 617
+R+ +I+G PE + A+ I
Sbjct: 435 ATERMVIITGPPEAQFKAQGRI 456
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 92/425 (21%), Positives = 175/425 (41%), Gaps = 77/425 (18%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKEDVEV 98
R+L P +G++IGK G I ++ ++T+++V + GA ++ +TI++
Sbjct: 184 RMLVPTQFVGAIIGKEGLTIKNLTKQTQSKVDIHRKENAGAAEKPITIHA---------- 233
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
E A +L + A ++ K E+ +IL +S +IGK
Sbjct: 234 -----TPEGCSEACRMILDIMQKEA--------DETKSAEEIPLKILAHNSLVGRLIGKE 280
Query: 159 GATIKRLRSKTRTSIKVTP-KDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYK 217
G +K++ T T I ++P +D + + + + G +EA A
Sbjct: 281 GRNLKKIEQDTGTKITISPLQDLT------IYNPERTITVKGSTEACSNA---------- 324
Query: 218 FSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQ 277
++ + +REA + I+ + GL +A I + G + +P
Sbjct: 325 -----EVEIMKKLREAYENDIVAVNQQANLIPGLNLSALGIFST-------GLSMLPSSA 372
Query: 278 GYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQAS 337
G P + L E+ V+ + P +G +IGK G IK + + +
Sbjct: 373 GARGAAAAAPYHPFAL-----------PEQEVVNLFIPTQAVGAIIGKKGQHIKQLARFA 421
Query: 338 GAQIDVDDTK--DNRDECVITVTAIESPDDIKSMA---VEAVLLLQTKINDEDDDTVTIR 392
GA I + + D + VI I P + + A + L + N +++ +
Sbjct: 422 GASIKIAPAEGPDATERMVI----ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAH 477
Query: 393 LLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDE-LVEVVGEVGSVRD 451
+ V S G +IGK G +NE++ T A+V + + P D N+E +V+++G + +
Sbjct: 478 IKVPSFAAGRVIGKGGKTVNELQNLTSAEVIVPRDQTP---DENEEVIVKIIGHFFASQT 534
Query: 452 ALVQI 456
A +I
Sbjct: 535 AQRKI 539
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 99/236 (41%), Gaps = 39/236 (16%)
Query: 27 EKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAK----DR 82
E DE + E + +IL + ++G +IGK G+ + I Q+T ++ + P +R
Sbjct: 252 EADETKSAEEIPLKILAHNSLVGRLIGKEGRNLKKIEQDTGTKI-TISPLQDLTIYNPER 310
Query: 83 VVTIYSHVKDKEDVEVD-----DEFNDKEPLCAAQDA-------------------LLKV 118
+T+ + + EV+ E + + + Q A +L
Sbjct: 311 TITVKGSTEACSNAEVEIMKKLREAYENDIVAVNQQANLIPGLNLSALGIFSTGLSMLPS 370
Query: 119 HAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPK 178
A A A A + E+E + +P+ IIGK G IK+L SIK+ P
Sbjct: 371 SAGARGAAAAAPYHPFALPEQEVVNLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPA 430
Query: 179 DASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYK---FSPREDIPLETTVR 231
+ + T + V+I+G EA KA I + + F+P+E++ LE ++
Sbjct: 431 EGPDAT-------ERMVIITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIK 479
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 59/148 (39%), Gaps = 24/148 (16%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPF-PGAKDRVVTIYSHVKDK 93
E + + P +G++IGK G+ I + + A +K+ P A +R+V I
Sbjct: 390 EQEVVNLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAEGPDATERMVII------- 442
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
+A K I + + K + K E I VPS +
Sbjct: 443 ---------------TGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIKVPSFAAGR 487
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+IGK G T+ L++ T + + P+D +
Sbjct: 488 VIGKGGKTVNELQNLTSAEV-IVPRDQT 514
>gi|297735477|emb|CBI17917.3| unnamed protein product [Vitis vinifera]
Length = 364
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 142/324 (43%), Gaps = 64/324 (19%)
Query: 339 AQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQ---TKINDEDDD-------- 387
A+I V D + ++ ++ E P+ S A++AV+ + T +++ + D
Sbjct: 7 ARIRVLDGAVGTSDRIVLISGREEPEAPLSPAMDAVIRVFKRVTGLSESEGDGKAYGAAG 66
Query: 388 --TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDK-PKCADANDELVEVVG 444
+IRLLV+S +IGK GS+I I++ T A VR+ GD+ P A A++ +VE+ G
Sbjct: 67 VAFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASVRVLSGDEVPFYAAADERIVELQG 126
Query: 445 EVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLG 504
E V+ AL ++ LR + DH S+ PL +
Sbjct: 127 EALKVQKALEAVVGHLRKFLV-------------DH--------SVLPLFERTYNA-TIS 164
Query: 505 YDQRADSGSGIGMLSSSSLYGYGS-----------------------LSMGDSPYGSMSS 541
D+++D+ + +L +S G GS L M +G +S
Sbjct: 165 QDRQSDTWADKSLLHGTSQTGMGSDYSLPAKRESLYLDRETQMEHSGLPMYGQEHG-LSG 223
Query: 542 YSSKLYGGLPPPLTLEVL----VPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRG 597
S G P+ ++ +P + +IG G+N+A IR+ SGA + + +S+
Sbjct: 224 IRSSGLGRAGAPIVTQIAQTMQIPLSYAEDIIGIGGANIAYIRRTSGAILTVQESRGLPD 283
Query: 598 DRVALISGTPEQKRAAENLIQAFI 621
+ I GT Q + A+ LIQ FI
Sbjct: 284 EITVEIKGTSSQVQTAQQLIQEFI 307
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 135/313 (43%), Gaps = 35/313 (11%)
Query: 64 QETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIA 123
+ETRAR++V+D G DR+V I +E+ E PL A DA+++V +
Sbjct: 3 EETRARIRVLDGAVGTSDRIVLI----SGREEPEA--------PLSPAMDAVIRVFKRVT 50
Query: 124 NAVANATDNDKKRKEKE-----ECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPK 178
+ ++ D K ++LV S+Q+ N+IGK G+ IK ++ T S++V
Sbjct: 51 G--LSESEGDGKAYGAAGVAFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASVRVLSG 108
Query: 179 DASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDI-PLETTVREAPPSI 237
D P ++ A E V + GE+ V+KAL A+ + KF + PL A S
Sbjct: 109 DEV-PFYAAADE--RIVELQGEALKVQKALEAVVGHLRKFLVDHSVLPLFERTYNATISQ 165
Query: 238 IIPSDVP-----IYPPGGLYPNADPILPSRSVPSILGAARVPDLQG---YADTGNTWPVY 289
SD ++ +D LP++ L + G Y +
Sbjct: 166 DRQSDTWADKSLLHGTSQTGMGSDYSLPAKRESLYLDRETQMEHSGLPMYGQEHGLSGIR 225
Query: 290 STGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDN 349
S+GL G GA ++ + P + +IG GG I IR+ SGA + V +++
Sbjct: 226 SSGL----GRAGAPIVTQIAQTMQIPLSYAEDIIGIGGANIAYIRRTSGAILTVQESRGL 281
Query: 350 RDECVITVTAIES 362
DE + + S
Sbjct: 282 PDEITVEIKGTSS 294
>gi|426249910|ref|XP_004018689.1| PREDICTED: poly(rC)-binding protein 4 [Ovis aries]
Length = 425
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 140/308 (45%), Gaps = 52/308 (16%)
Query: 329 TIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKINDED--- 385
T+K IR+ S A+I + + C +T I + AV ++ K+ DED
Sbjct: 61 TVKRIREQSSARITISE-----GSCPERITTI---TGSTAAVFHAVSMIAFKL-DEDLCA 111
Query: 386 ---------DDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADAN 436
VT+RL++ + G +IGK+G+ I EIR+ T A V+++ P ++
Sbjct: 112 APANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLP---NST 168
Query: 437 DELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSGTGISMPPLLPS 496
+ V V G V DA++ + ++ L+ +PP GA Y +S+ +L
Sbjct: 169 ERAVTVSG----VPDAIILCVRQICAVILE------SPPKGATIPYHPS--LSLGTVL-- 214
Query: 497 IPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPL-- 554
L +Q G ++ + + LS P+ S S + GL P
Sbjct: 215 ------LSTNQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPS-----MVPGLDPSTQT 263
Query: 555 -TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAA 613
+ E LVP + +G VIG+ GS ++ IR++SGA I++ + G+R I+G+P A
Sbjct: 264 SSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALA 323
Query: 614 ENLIQAFI 621
+ LI A +
Sbjct: 324 QYLITACL 331
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 120/303 (39%), Gaps = 49/303 (16%)
Query: 57 KVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALL 116
+ + IR+++ AR+ + + +R+ TI F E LCAA
Sbjct: 60 ETVKRIREQSSARITISEG--SCPERITTITGSTAAVFHAVSMIAFKLDEDLCAA----- 112
Query: 117 KVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVT 176
+ + ++++P+SQ ++IGKAG IK +R T ++V
Sbjct: 113 ------------PANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVA 160
Query: 177 PKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPR-EDIPLETTVREAPP 235
T + V +SG +A+ + I A++ + P+ IP ++
Sbjct: 161 GDLLPNST-------ERAVTVSGVPDAIILCVRQICAVILESPPKGATIPYHPSLSLG-- 211
Query: 236 SIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTWPVYSTGLSL 295
++ S + G Y P A V LQ +G+ P S S+
Sbjct: 212 -TVLLSTNQGFSVQGQYGAVTP-------------AEVTKLQQL--SGHAVPFASP--SM 253
Query: 296 VSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVI 355
V GL ++Q+ L P + IG VIG+ G I IRQ SGA I + + + E +
Sbjct: 254 VPGLDPSTQTSSQ--EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHV 311
Query: 356 TVT 358
T+T
Sbjct: 312 TIT 314
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDV-DDTKDNRDECVITVTAIESPDDI 366
+ +R++ P ++ G +IGK G IK IR+ +GAQ+ V D N E +TV+ + PD I
Sbjct: 124 VTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGV--PDAI 181
Score = 39.3 bits (90), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 37 VIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTI 86
V R++ P GS+IGK+G I IR+ T A+V+V D P + +R VT+
Sbjct: 124 VTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTV 174
Score = 39.3 bits (90), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 29/46 (63%)
Query: 41 ILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTI 86
L P+ +IG VIG+ G I+ IRQ + A +K+ + GA +R VTI
Sbjct: 268 FLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTI 313
>gi|198458337|ref|XP_002138531.1| GA24337 [Drosophila pseudoobscura pseudoobscura]
gi|198136305|gb|EDY69089.1| GA24337 [Drosophila pseudoobscura pseudoobscura]
Length = 505
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 88/177 (49%), Gaps = 12/177 (6%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
E +R+L P + G VIGKGG I+ +R A + VDD++ E I ++A DI
Sbjct: 22 EDTVRILIPSSIAGAVIGKGGQHIQKMRTQYKAAVSVDDSQG--PERTIQISA-----DI 74
Query: 367 KSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISK 426
+ A ++ K +E D+ +RLL+ + GC+IGK G I EIR R R K
Sbjct: 75 E--ATLEIITEMLKYFEERDEDFDVRLLIHQSLAGCVIGKGGQKIKEIRDRIGC--RFLK 130
Query: 427 GDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYS 483
+ D +V+ VG+ V +A+ ++I RD +K + + P+ D +Y+
Sbjct: 131 VFSNVAPQSTDRVVQTVGKQAQVIEAVREVITLTRDTPIKGAIHNYD-PMNFDRVYA 186
Score = 40.0 bits (92), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 65/143 (45%), Gaps = 33/143 (23%)
Query: 26 NEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVT 85
++K + NE++V RIL P + G+VIGK G+ I +R + +A V V D +R +
Sbjct: 14 DQKRNRRNEDTV--RILIPSSIAGAVIGKGGQHIQKMRTQYKAAVSVDD--SQGPERTIQ 69
Query: 86 IYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQIL 145
I + ++ ++ + +LK ++R E + ++L
Sbjct: 70 ISADIEATLEIITE---------------MLKYF--------------EERDEDFDVRLL 100
Query: 146 VPSSQSANIIGKAGATIKRLRSK 168
+ S + +IGK G IK +R +
Sbjct: 101 IHQSLAGCVIGKGGQKIKEIRDR 123
Score = 38.9 bits (89), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 53/110 (48%), Gaps = 14/110 (12%)
Query: 131 DNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAME 190
D + R+ ++ +IL+PSS + +IGK G I+++R++ + ++ V E T
Sbjct: 14 DQKRNRRNEDTVRILIPSSIAGAVIGKGGQHIQKMRTQYKAAVSVDDSQGPERT------ 67
Query: 191 FDNFVLISGESEAVKKALFAISAIMYKFSPR-EDIPLETTVREAPPSIII 239
+ IS + EA L I+ ++ F R ED + + ++ +I
Sbjct: 68 ----IQISADIEAT---LEIITEMLKYFEERDEDFDVRLLIHQSLAGCVI 110
>gi|197101075|ref|NP_001125573.1| insulin-like growth factor 2 mRNA-binding protein 2 [Pongo abelii]
gi|75041981|sp|Q5RB68.1|IF2B2_PONAB RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 2;
Short=IGF2 mRNA-binding protein 2; Short=IMP-2; AltName:
Full=IGF-II mRNA-binding protein 2; AltName: Full=VICKZ
family member 2
gi|55728499|emb|CAH90992.1| hypothetical protein [Pongo abelii]
Length = 556
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/322 (22%), Positives = 138/322 (42%), Gaps = 62/322 (19%)
Query: 301 GASQSEEL--VIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
G SQ+ ++ +R+L P +G +IGK G TIK+I + + +++D+ K+N VT
Sbjct: 185 GTSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDI-HRKENSGAAEKPVT 243
Query: 359 AIESPDDIKSMAVEAVLLLQTKINDEDD--DTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
+P+ S A +L + K DE + + +++L + ++G +IGK G + +I
Sbjct: 244 IHATPEGT-SEACRMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEH 302
Query: 417 RTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPV 476
T + IS + + + V G V + A ++I+ +LR+ D
Sbjct: 303 ETGTKITISSLQDLSIYNP-ERTITVKGTVEACASAEIEIMKKLREAFEND--------- 352
Query: 477 GADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPY 536
ML+ ++ GY S +
Sbjct: 353 ----------------------------------------MLAVNTHSGYFSSLYPHHQF 372
Query: 537 GSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS-S 595
G + S P + + +P AVG +IGK G+++ + + +GA+I+++ ++
Sbjct: 373 GPFPHHHS-----YPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPD 427
Query: 596 RGDRVALISGTPEQKRAAENLI 617
+R+ +I+G PE + A+ I
Sbjct: 428 VSERMVIITGPPEAQFKAQGRI 449
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 100/218 (45%), Gaps = 23/218 (10%)
Query: 27 EKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKV---VDPFPGAKDRV 83
E DE E + +IL +G++G +IGK G+ + I ET ++ + D +R
Sbjct: 265 EADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERT 324
Query: 84 VTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKV--HAAIANAVANATD-----NDKKR 136
+T+ V+ E++ +E A ++ +L V H+ +++ +
Sbjct: 325 ITVKGTVEACASAEIEIMKKLRE---AFENDMLAVNTHSGYFSSLYPHHQFGPFPHHHSY 381
Query: 137 KEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVL 196
E+E + +P+ IIGK GA IK+L SIK+ P + + + + V+
Sbjct: 382 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVS-------ERMVI 434
Query: 197 ISGESEAVKKALFAISAIMYK---FSPREDIPLETTVR 231
I+G EA KA I + + F+P+E++ LE +R
Sbjct: 435 ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIR 472
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 80/357 (22%), Positives = 146/357 (40%), Gaps = 62/357 (17%)
Query: 142 CQILVPSSQSANIIGKAGATIKRLRSKTRT-----------------SIKVTPKDASEPT 184
+ILVP+ IIGK G TIK + +T++ +I TP+ SE
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTSE-- 253
Query: 185 HSCAMEFDNFVLISGESEAVKKA------LFAISAIMYKFSPREDIPLETTVREAPPSII 238
+C M + ++ E++ K A + A + ++ + +E L+ E I
Sbjct: 254 -ACRMILE---IMQKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKIT 309
Query: 239 IPS--DVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQGYADTG-NTWPVYSTGLSL 295
I S D+ IY N + + + +A + ++ + N +T
Sbjct: 310 ISSLQDLSIY-------NPERTITVKGTVEACASAEIEIMKKLREAFENDMLAVNTHSGY 362
Query: 296 VSGLVGASQS----------EELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDD 345
S L Q E+ ++ + P +G +IGK G IK + + +GA I +
Sbjct: 363 FSSLYPHHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAP 422
Query: 346 TK--DNRDECVITVTAIESPDDIKSMA---VEAVLLLQTKINDEDDDTVTIRLLVSSKVI 400
+ D + VI I P + + A + L + N +++ + + V S
Sbjct: 423 AEGPDVSERMVI----ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTA 478
Query: 401 GCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDE-LVEVVGEVGSVRDALVQI 456
G +IGK G +NE++ T A+V + + P D N+E +V ++G + + A +I
Sbjct: 479 GRVIGKGGKTVNELQNLTSAEVIVPRDQTP---DENEEVIVRIIGHFFASQTAQRKI 532
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 58/148 (39%), Gaps = 24/148 (16%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPF-PGAKDRVVTIYSHVKDK 93
E I + P +G++IGK G I + + A +K+ P +R+V I
Sbjct: 383 EQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII------- 435
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
+A K I + + K + K E I VPSS +
Sbjct: 436 ---------------TGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGR 480
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+IGK G T+ L++ T + + P+D +
Sbjct: 481 VIGKGGKTVNELQNLTSAEV-IVPRDQT 507
>gi|296812925|ref|XP_002846800.1| KH domain RNA binding protein [Arthroderma otae CBS 113480]
gi|238842056|gb|EEQ31718.1| KH domain RNA binding protein [Arthroderma otae CBS 113480]
Length = 477
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 89/357 (24%), Positives = 154/357 (43%), Gaps = 60/357 (16%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSM 369
IR + + VIGKGG + IR+ SGA+ V D E ++T + + +
Sbjct: 133 IRAVISSAEAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTAFGLII-RTLNNE 191
Query: 370 AVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDK 429
+EA Q+K T +RLL+ +IG IIGKSG I EI++ + A R++ D
Sbjct: 192 PLEAPSTAQSK-------TYPLRLLIPHILIGSIIGKSGVRIREIQEASGA--RLNASDS 242
Query: 430 PKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSGTG-- 487
LV ++G +V A + + L + L +R G P + + SG
Sbjct: 243 CLPLSTERSLV-ILGVADAVHIATYYVAVTLVEQ-LTERFGG---PAASAYATRSGGPAG 297
Query: 488 -----ISMPPLLPSIPPVGPLGY-----------DQRADSGSGIGMLSSSSLYGYG---S 528
+ + P +P P G G+ ++ G G+ + + + S
Sbjct: 298 VVPGGMQVVPYVPQ-PAGGQYGHPDSLRRNNPQANRATPGGYGVPYMQQPGPHPHAPQPS 356
Query: 529 LSMGDSP---YGSMSSYSSKLYGG--------LPP------------PLTLEVLVPANAV 565
L G SP Y + YG +PP PLT ++ +P + V
Sbjct: 357 LHYGASPRQGYTGAGPHQPAPYGAPQPPHGGHVPPNGPPMGAAVPGQPLTQQIYIPNDMV 416
Query: 566 GKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFIM 622
G +IGK G+ + IR +SG+ I++++ + + +R+ I+GT E + A ++ + ++
Sbjct: 417 GAIIGKGGAKINEIRHLSGSVIKINEPQDNSNERLVTITGTQECNQMALYMLYSRLV 473
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 86/377 (22%), Positives = 149/377 (39%), Gaps = 86/377 (22%)
Query: 28 KDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIY 87
+DE G V R + +VIGK G+ ++ IR+ + A+ V D GA +R++T +
Sbjct: 125 QDETG---WVHIRAVISSAEAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTAF 181
Query: 88 SHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVP 147
+ N+ EPL A A K + ++L+P
Sbjct: 182 GLIIRT--------LNN-EPLEAPSTAQSKTYP---------------------LRLLIP 211
Query: 148 SSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSC-AMEFDNFVLISGESEAVKK 206
+IIGK+G I+ ++ + + +AS+ SC + + ++I G ++AV
Sbjct: 212 HILIGSIIGKSGVRIREIQEASGARL-----NASD---SCLPLSTERSLVILGVADAVHI 263
Query: 207 ALFAIS-AIMYKFSPREDIPLETTVREAPPSI---------IIPSDVPIYPPGGLYPNAD 256
A + ++ ++ + + R P + ++P VP P GG Y + D
Sbjct: 264 ATYYVAVTLVEQLTERFGGPAASAYATRSGGPAGVVPGGMQVVPY-VP-QPAGGQYGHPD 321
Query: 257 PI----------------LPSRSVPSILGAARVPDL-------QGYADTGNTWPV-YSTG 292
+ +P P A P L QGY G P Y
Sbjct: 322 SLRRNNPQANRATPGGYGVPYMQQPGPHPHAPQPSLHYGASPRQGYTGAGPHQPAPYGAP 381
Query: 293 LSLVSGLV--------GASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVD 344
G V A + L ++ P + +G +IGKGG I IR SG+ I ++
Sbjct: 382 QPPHGGHVPPNGPPMGAAVPGQPLTQQIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKIN 441
Query: 345 DTKDNRDECVITVTAIE 361
+ +DN +E ++T+T +
Sbjct: 442 EPQDNSNERLVTITGTQ 458
>gi|395532668|ref|XP_003768391.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
isoform 1 [Sarcophilus harrisii]
Length = 577
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 149/332 (44%), Gaps = 47/332 (14%)
Query: 292 GLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRD 351
G +V+G Q ++ +R+L P +G +IGK G TI++I + + ++IDV K+N
Sbjct: 180 GSPVVAGAPSKQQPVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDV-HRKENAG 238
Query: 352 ECVITVTAIESPDDIKSMAVEAVLLLQTKIND-EDDDTVTIRLLVSSKVIGCIIGKSGSI 410
++ +P+ S + ++Q + D + D V +++L + +G +IGK G
Sbjct: 239 AAEKAISVHSTPEGCSSACKMILEIMQKEAKDTKTADEVPLKILAHNNFVGRLIGKEGRN 298
Query: 411 INEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDG 470
+ ++ + T+ + IS + + + V G + + A +I+ ++R+ D
Sbjct: 299 LKKVEQDTETKITISSLQDLTLYNP-ERTITVKGSIENCCKAEQEIMKKVREAYEND--- 354
Query: 471 SRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLS 530
V A + S L+P + + G+ SSS++ S
Sbjct: 355 -----VAAMSLQSH--------LIPGL-----------NLAAVGLFPASSSAVPPPPSSV 390
Query: 531 MGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATI--- 587
G +PY S + P ++V +PA AVG +IGK G ++ + + + A+I
Sbjct: 391 SGAAPYSS--------FMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIA 442
Query: 588 --EMSDSKSSRGDRVALISGTPEQKRAAENLI 617
E DSK R+ +I+G PE + A+ I
Sbjct: 443 PPETPDSKV----RMVIITGPPEAQFKAQGRI 470
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 97/433 (22%), Positives = 176/433 (40%), Gaps = 87/433 (20%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKEDVEV 98
R+L P +G++IGK G I +I ++T++++ V GA ++ ++++S
Sbjct: 199 RLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHS---------- 248
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
E +A +L++ A D K ++ +IL ++ +IGK
Sbjct: 249 -----TPEGCSSACKMILEIMQKEAK--------DTKTADEVPLKILAHNNFVGRLIGKE 295
Query: 159 GATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKF 218
G +K++ T T K+T + T + + + G E KA IM K
Sbjct: 296 GRNLKKVEQDTET--KITISSLQDLT---LYNPERTITVKGSIENCCKAE---QEIMKK- 346
Query: 219 SPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPN--ADPILPSRSVPSILGAARVPDL 276
VREA Y N A L S +P L A V
Sbjct: 347 -----------VREA------------------YENDVAAMSLQSHLIPG-LNLAAVGLF 376
Query: 277 QGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQA 336
+ P +G + S + A + E +++V P +G +IGK G IK + +
Sbjct: 377 PASSSAVPPPPSSVSGAAPYSSFMQAPEQE--MVQVFIPAQAVGAIIGKKGQHIKQLSRF 434
Query: 337 SGAQIDVD--DTKDNRDECVITVTAIESPDDIKSMA---VEAVLLLQTKINDEDDDTVTI 391
+ A I + +T D++ VI I P + + A + L + +++ +
Sbjct: 435 ASASIKIAPPETPDSKVRMVI----ITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLET 490
Query: 392 RLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDE-LVEVVGEVGS-- 448
+ V + G +IGK G +NE++ T A+V + + P D N++ +V+++G +
Sbjct: 491 HIRVPASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQTP---DENEQVIVKIIGHFYASQ 547
Query: 449 -----VRDALVQI 456
+RD L Q+
Sbjct: 548 MAQRKIRDILAQV 560
Score = 43.1 bits (100), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 24/148 (16%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDP-FPGAKDRVVTIYSHVKDK 93
E + ++ P +G++IGK G+ I + + A +K+ P P +K R+V I
Sbjct: 404 EQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVII------- 456
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
+A K I + K + K E I VP+S +
Sbjct: 457 ---------------TGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGR 501
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+IGK G T+ L++ T + V P+D +
Sbjct: 502 VIGKGGKTVNELQNLTAAEV-VVPRDQT 528
>gi|346971553|gb|EGY15005.1| Poly(rC)-binding protein [Verticillium dahliae VdLs.17]
Length = 514
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 142/326 (43%), Gaps = 28/326 (8%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTA-IESPDD 365
+L +R + + G +IGKGG + +R +G + V + V+T+T E+
Sbjct: 46 QLTLRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTITGGCEAISR 105
Query: 366 IKSMAVEAVLLLQTKIN----DEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKAD 421
++ +A+L + + + T I+LL+S +G IIG+ G I I+ +
Sbjct: 106 AYAIVAQALLEGAPSLGMGGVPQSNGTHPIKLLISHNQMGTIIGRQGLKIKHIQDVSGVR 165
Query: 422 VRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHI 481
+ K P+ + + +VEV G +R A+ +I L DD + PV
Sbjct: 166 MVAQKEMLPQ---STERIVEVQGTPDGIRAAIWEISKCLVDDWQRGTGTVLYNPVVRTQ- 221
Query: 482 YSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSS 541
G+ ++ PS P G R+ S +L + + + S G PY S
Sbjct: 222 --PGSTPAVGGTSPSYPSTG----GGRSQEYSSPRVLRTGNGADFSSNGGGQRPYSRRSD 275
Query: 542 YSSKLYGGLPPPL---------TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDS 592
+ G PP T + +PA+ VG +IG+AGS ++ IRK SGA I ++ +
Sbjct: 276 SDAASRG---PPTHDENGEELQTQNISIPADMVGCIIGRAGSKISEIRKTSGARISIAKA 332
Query: 593 -KSSRGDRVALISGTPEQKRAAENLI 617
G+R+ I GT + +A L+
Sbjct: 333 PHDETGERMFTIMGTSKANESALFLL 358
Score = 39.7 bits (91), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 76/363 (20%), Positives = 136/363 (37%), Gaps = 58/363 (15%)
Query: 29 DEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYS 88
+E+ + + R + G +IGK GK + +R ET + V G DRV+TI
Sbjct: 39 EEEYAQAQLTLRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTI-- 96
Query: 89 HVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDN-----DKKRKEKEECQ 143
+A+ + +A +A A+ + + +
Sbjct: 97 --------------------TGGCEAISRAYAIVAQALLEGAPSLGMGGVPQSNGTHPIK 136
Query: 144 ILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEA 203
+L+ +Q IIG+ G IK ++ + +++ + P + + V + G +
Sbjct: 137 LLISHNQMGTIIGRQGLKIKHIQDV--SGVRMVAQKEMLPQST-----ERIVEVQGTPDG 189
Query: 204 VKKALFAISAIMYKFSPR--EDIPLETTVREAPPSI-IIPSDVPIYPPGGLYPNADPILP 260
++ A++ IS + R + VR P S + P YP G + +
Sbjct: 190 IRAAIWEISKCLVDDWQRGTGTVLYNPVVRTQPGSTPAVGGTSPSYPSTGGGRSQE---- 245
Query: 261 SRSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGA----SQSEELVIR-VLCP 315
S P +L R + ++ G YS + G EEL + + P
Sbjct: 246 -YSSPRVL---RTGNGADFSSNGGGQRPYSRRSDSDAASRGPPTHDENGEELQTQNISIP 301
Query: 316 FNKIGRVIGKGGGTIKSIRQASGAQIDVDDT-KDNRDECVITVTAIESPDDIKSMAVEAV 374
+ +G +IG+ G I IR+ SGA+I + D E + T+ S A E+
Sbjct: 302 ADMVGCIIGRAGSKISEIRKTSGARISIAKAPHDETGERMFTIMGT-------SKANESA 354
Query: 375 LLL 377
L L
Sbjct: 355 LFL 357
>gi|242764737|ref|XP_002340835.1| KH domain RNA binding protein [Talaromyces stipitatus ATCC 10500]
gi|218724031|gb|EED23448.1| KH domain RNA binding protein [Talaromyces stipitatus ATCC 10500]
Length = 461
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 95/373 (25%), Positives = 157/373 (42%), Gaps = 73/373 (19%)
Query: 304 QSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESP 363
+S + IR + + IGKGG + IRQ SG++ V D E ++TV+ P
Sbjct: 100 ESSWIHIRAVISSQEAATCIGKGGENVSKIRQLSGSKCTVSDYSRGAVERILTVSG---P 156
Query: 364 DDIKSMAVEAVLLLQTKINDE--------DDDTVTIRLLVSSKVIGCIIGKSGSIINEIR 415
D + A L+++T +N+E T +RLL+ +IG IIGK G I EI+
Sbjct: 157 QDAVAKAFG--LIIRT-LNNEPLEAPSTAQSKTYPLRLLIPHILIGSIIGKGGVRIREIQ 213
Query: 416 KRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPP 475
+ + A R++ D LV V+G +V A + + L + L +R G P
Sbjct: 214 EASGA--RLNASDACLPLSTERSLV-VLGVADAVHIATYYVAVTLVEQ-LTERFGG---P 266
Query: 476 VGADHIYSSGTG-------ISMPPLLPSIPPVGPLG--------YDQRADSGSGIGMLSS 520
+ + SG + + P +P P G G Y Q G G
Sbjct: 267 AASAYATRSGGPAGVVPGGMQVVPYVPQ-PAGGQYGHPDSVRRHYPQNNRPGPG----PY 321
Query: 521 SSLYGYGS-----------LSMGD----SPYGSMSSYSSKLYG---------GLPP---- 552
+ Y +G L G +PY + YG G P
Sbjct: 322 GAPYAHGGPAAQAPVAQPPLHYGGGAARAPYAGAGPHQPAPYGAPHAQPHGAGAQPLAGV 381
Query: 553 ----PLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPE 608
P+T ++ +P + VG +IGK G+ + IR +SG+ I++++ + + +R+ I+GT E
Sbjct: 382 VSSQPITQQIYIPNDMVGAIIGKGGTKINEIRHLSGSVIKINEPQENSNERLVTITGTQE 441
Query: 609 QKRAAENLIQAFI 621
+ A ++ A +
Sbjct: 442 CNQMALYMLYARL 454
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 81/378 (21%), Positives = 152/378 (40%), Gaps = 80/378 (21%)
Query: 50 SVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLC 109
+ IGK G+ ++ IRQ + ++ V D GA +R++T+
Sbjct: 117 TCIGKGGENVSKIRQLSGSKCTVSDYSRGAVERILTV----------------------S 154
Query: 110 AAQDALLKVHAAIANAVANA--TDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRS 167
QDA+ K I + N + + ++L+P +IIGK G I+ ++
Sbjct: 155 GPQDAVAKAFGLIIRTLNNEPLEAPSTAQSKTYPLRLLIPHILIGSIIGKGGVRIREIQE 214
Query: 168 KTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAIS-AIMYKFSPREDIPL 226
+ + + DA P + + +++ G ++AV A + ++ ++ + + R P
Sbjct: 215 ASGARLNAS--DACLP-----LSTERSLVVLGVADAVHIATYYVAVTLVEQLTERFGGPA 267
Query: 227 ETTVREAPPSI---------IIPSDVPIYPPGGLYPNADPI---LP--SRSVPSILG--- 269
+ ++P VP P GG Y + D + P +R P G
Sbjct: 268 ASAYATRSGGPAGVVPGGMQVVPY-VP-QPAGGQYGHPDSVRRHYPQNNRPGPGPYGAPY 325
Query: 270 -----AARVPDLQ------------GYADTGNTWPV-YSTGLSLVSG-----LVGASQSE 306
AA+ P Q YA G P Y + G L G S+
Sbjct: 326 AHGGPAAQAPVAQPPLHYGGGAARAPYAGAGPHQPAPYGAPHAQPHGAGAQPLAGVVSSQ 385
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
+ ++ P + +G +IGKGG I IR SG+ I +++ ++N +E ++T+T + + +
Sbjct: 386 PITQQIYIPNDMVGAIIGKGGTKINEIRHLSGSVIKINEPQENSNERLVTITGTQECNQM 445
Query: 367 KSMAVEAVLLLQTKINDE 384
A+ +L ++ E
Sbjct: 446 ------ALYMLYARLESE 457
Score = 39.7 bits (91), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 33/52 (63%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTI 86
+ + +I P+ ++G++IGK G IN IR + + +K+ +P + +R+VTI
Sbjct: 385 QPITQQIYIPNDMVGAIIGKGGTKINEIRHLSGSVIKINEPQENSNERLVTI 436
>gi|307136423|gb|ADN34230.1| hypothetical protein [Cucumis melo subsp. melo]
Length = 331
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 122/246 (49%), Gaps = 27/246 (10%)
Query: 240 PSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQGYADTG-----NTWPVYSTGLS 294
P D+P+YP P P+ S +P L + G+ TG + V ++ S
Sbjct: 3 PGDIPLYPS---MPAMAPLPVSMPLPGTLLVSE----PGHTVTGKRRREDDLIVSNSDAS 55
Query: 295 LVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECV 354
VS +++ +++ R++ P +IG+VIGK G I+ +R+ + A I + D +E V
Sbjct: 56 DVSAPKRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERV 115
Query: 355 ITVTAIESPDDI----KSMAVEAVLLL--------QTKINDEDDDTVTIRLLVSSKVIGC 402
I +++ ++ + + K++ A L+L + K+ TIRLL++ G
Sbjct: 116 IIISSKDNENSVTDAEKALQQIAALILKEDGSSIEELKVGTGHVAANTIRLLIAGSQAGS 175
Query: 403 IIGKSGSIINEIRKRTKADVRISKGDK-PKCADAN--DELVEVVGEVGSVRDALVQIILR 459
+IG SG I ++R + A + I ++ P CA A+ D +V++ G++ +V AL +I +
Sbjct: 176 LIGASGQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDILAVLKALEEIGNQ 235
Query: 460 LRDDAL 465
LR L
Sbjct: 236 LRKTNL 241
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 90/178 (50%), Gaps = 17/178 (9%)
Query: 37 VIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDV 96
V++RI+ P IG VIGK G I +R+ET+A +K+ D ++RV+ I S KD E+
Sbjct: 69 VLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISS--KDNENS 126
Query: 97 EVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDK---KRKEKEECQILVPSSQSAN 153
D A+ AL ++ A I ++ + K ++L+ SQ+ +
Sbjct: 127 VTD-----------AEKALQQIAALILKEDGSSIEELKVGTGHVAANTIRLLIAGSQAGS 175
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAI 211
+IG +G I++LR+ + SI + + P + A E D V ISG+ AV KAL I
Sbjct: 176 LIGASGQNIEKLRNSSGASITILAPN-QLPLCASAHESDRVVQISGDILAVLKALEEI 232
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 34/51 (66%)
Query: 554 LTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALIS 604
+ ++VP+ +GKVIGK G + +R+ + ATI+++D+ + +RV +IS
Sbjct: 69 VLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIIS 119
>gi|149031922|gb|EDL86834.1| rCG50739, isoform CRA_c [Rattus norvegicus]
Length = 317
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 157/336 (46%), Gaps = 50/336 (14%)
Query: 297 SGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVIT 356
+G++ + L IR+L ++G +IGK G ++K +R+ SGA+I++ + N E +IT
Sbjct: 3 TGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIIT 60
Query: 357 VTAIESPDDIKSMAVEAVL-LLQTKINDEDDDT-------VTIRLLVSSKVIGCIIGKSG 408
+ P + A ++ L+ I+ ++ VT+RL+V + G +IGK G
Sbjct: 61 LAG---PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGG 117
Query: 409 SIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDR 468
I EIR+ T A V+++ P ++ + + + G S+ + + QI + + +
Sbjct: 118 CKIKEIRESTGAQVQVAGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLE------ 168
Query: 469 DGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSL-YGYG 527
+PP G Y PS PV +G + L ++ +
Sbjct: 169 ----SPPKGVTIPYRPK---------PSSSPV--------IFAGGQLTKLHQLAMQQSHF 207
Query: 528 SLSMGDSPYGSMSSYSSKL---YGGL---PPPLTLEVLVPANAVGKVIGKAGSNLANIRK 581
++ G++ + + S S ++ + GL + E+ +P + +G +IG+ G+ + IR+
Sbjct: 208 PMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQ 267
Query: 582 ISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLI 617
+SGA I++++ DR I+G+ A+ LI
Sbjct: 268 MSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLI 303
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 144/344 (41%), Gaps = 75/344 (21%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH 89
E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R++T
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIIT---- 60
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAV-----ANATDNDKKRKEKEECQI 144
L +A+ K A I + + ++ T++ + ++
Sbjct: 61 ------------------LAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRL 102
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAV 204
+VP+SQ ++IGK G IK +R T ++V T + + I+G +++
Sbjct: 103 VVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNST-------ERAITIAGIPQSI 155
Query: 205 KKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRS- 263
+ + I +M + P+ T+ P PS P+ GG + +S
Sbjct: 156 IECVKQICVVMLESPPKG-----VTIPYRPK----PSSSPVIFAGGQLTKLHQLAMQQSH 206
Query: 264 VPSILG-------AARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQ--SEELVIRVLC 314
P G + P+++GY W +GL ++Q S EL I
Sbjct: 207 FPMTHGNTGFSGIESSSPEVKGY------W----------AGLDASAQTTSHELTI---- 246
Query: 315 PFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
P + IG +IG+ G I IRQ SGAQI + + + + +T+T
Sbjct: 247 PNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTIT 290
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 86/217 (39%), Gaps = 65/217 (29%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDV-DDTKDNRDE-------------- 352
+ +R++ P ++ G +IGKGG IK IR+++GAQ+ V D N E
Sbjct: 98 VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIE 157
Query: 353 CV--ITVTAIESP------------------------DDIKSMAVEAVLLLQTKIN---- 382
CV I V +ESP + +A++ T N
Sbjct: 158 CVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQLTKLHQLAMQQSHFPMTHGNTGFS 217
Query: 383 ----------------DEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISK 426
D T + L + + +IGCIIG+ G+ INEIR+ + A ++I+
Sbjct: 218 GIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN 277
Query: 427 GDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDD 463
+ D V + G S+ A I +RL +
Sbjct: 278 ----PVEGSTDRQVTITGSAASISLAQYLINVRLSSE 310
>gi|302770987|ref|XP_002968912.1| hypothetical protein SELMODRAFT_409630 [Selaginella moellendorffii]
gi|300163417|gb|EFJ30028.1| hypothetical protein SELMODRAFT_409630 [Selaginella moellendorffii]
Length = 393
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 145/342 (42%), Gaps = 68/342 (19%)
Query: 309 VIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKS 368
V R++ P +K+G +IG+ G +K + + + ++I + D E ++ V+A E P+ S
Sbjct: 50 VFRLIVPLHKVGAIIGRKGEFVKRMCEETRSRIKILDGVPGTLERIVLVSAKEDPEATIS 109
Query: 369 MAVEAVLLLQTKINDEDDD-------------TVTIRLLVSSKVIGCIIGKSGSIINEIR 415
A++ +L + ++ + V RLLV++ G +IG+
Sbjct: 110 PAMDGLLRVHRRVTEGSSGDGEPVEHIILPSGLVQSRLLVTATQAGSLIGR--------- 160
Query: 416 KRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPP 475
+ + P CA A+D +VEV GE+ V+ A+ ++ LR L DR +
Sbjct: 161 ----------QEELPLCALADDRMVEVQGEILKVQKAMELVVSHLRK-FLVDRSVLQLFE 209
Query: 476 VGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMG-DS 534
S G + G QRA S G +++ + + ++ +
Sbjct: 210 FNVSFAGSRSIGYKVHN-----------GELQRAMSSQVQGQQAAAIATSWATPTVAATT 258
Query: 535 PYGSMSSYSSK---------LYGGLP------------PPLTL--EVLVPANAVGKVIGK 571
PY S Y+ + +YGG P P T+ ++ VP +IG
Sbjct: 259 PYSSTDYYADQAQSQHYAVSVYGGDPGRVDVTSTTPAAPAETVSQQLQVPLLYADAIIGT 318
Query: 572 AGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAA 613
AG+N+ +R+ SGATI + ++ ++ G+ + G Q + A
Sbjct: 319 AGANINYMRRTSGATISIQETPNAPGEMTIEVHGQSTQVQTA 360
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 91/208 (43%), Gaps = 46/208 (22%)
Query: 18 GKNQKRRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFP 77
G ++ E+ G ++R++ P +G++IG+ G+ + + +ETR+R+K++D P
Sbjct: 30 GSQEETPPGERKWPGWPGDNVFRLIVPLHKVGAIIGRKGEFVKRMCEETRSRIKILDGVP 89
Query: 78 GAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRK 137
G +R+V V KED E + A D LL+VH V + D +
Sbjct: 90 GTLERIVL----VSAKEDPEAT--------ISPAMDGLLRVH----RRVTEGSSGDGEPV 133
Query: 138 EK-------EECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAME 190
E + ++LV ++Q+ ++IG+ E CA+
Sbjct: 134 EHIILPSGLVQSRLLVTATQAGSLIGR-----------------------QEELPLCALA 170
Query: 191 FDNFVLISGESEAVKKALFAISAIMYKF 218
D V + GE V+KA+ + + + KF
Sbjct: 171 DDRMVEVQGEILKVQKAMELVVSHLRKF 198
>gi|426340777|ref|XP_004034304.1| PREDICTED: poly(rC)-binding protein 4 isoform 4 [Gorilla gorilla
gorilla]
Length = 360
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 118/265 (44%), Gaps = 38/265 (14%)
Query: 384 EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVV 443
E T+T+R+L+ K +G IIGK G + IR+++ A + IS+G P + + +
Sbjct: 13 ELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCP------ERITTIT 66
Query: 444 GEVGSVRDALVQIILRLRDDALKDRDGSRN---PPVG----------ADHIYSSGTGI-- 488
G +V A+ I +L +D N PPV I +GT I
Sbjct: 67 GSTAAVFHAVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKE 126
Query: 489 --SMPPLLPSIP--PVGPLGY-----DQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSM 539
PP +IP P LG +Q G ++ + + LS P+ +
Sbjct: 127 IRESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPTEVTKLQQLSSHAVPFATP 186
Query: 540 SSYSSKLYGGLPPPL---TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSR 596
S + GL P + E LVP + +G VIG+ GS ++ IR++SGA I++ +
Sbjct: 187 S-----VVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGA 241
Query: 597 GDRVALISGTPEQKRAAENLIQAFI 621
G+R I+G+P A+ LI A +
Sbjct: 242 GERHVTITGSPVSIALAQYLITACL 266
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 72/323 (22%), Positives = 119/323 (36%), Gaps = 90/323 (27%)
Query: 36 SVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKED 95
++ R+L +GS+IGK G+ + IR+++ AR+ + + +R+ TI
Sbjct: 17 TLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE--GSCPERITTITGSTAAVFH 74
Query: 96 VEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANII 155
F E LCAA + + ++++P+SQ ++I
Sbjct: 75 AVSMIAFKLDEDLCAA-----------------PANGGNVSRPPVTLRLVIPASQCGSLI 117
Query: 156 GKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIM 215
GKAG IK +R PK A+ P H ++ +L + + +V+ A+
Sbjct: 118 GKAGTKIKEIRES-------PPKGATIPYHP-SLSLGTVLLSANQGFSVQGQYGAV---- 165
Query: 216 YKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPD 275
+P E L+ A P PS VP GL P
Sbjct: 166 ---TPTEVTKLQQLSSHAVP-FATPSVVP-----GLDPGTQ------------------- 197
Query: 276 LQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQ 335
+ S+E ++ P + IG VIG+ G I IRQ
Sbjct: 198 ---------------------------TSSQEFLV----PNDLIGCVIGRQGSKISEIRQ 226
Query: 336 ASGAQIDVDDTKDNRDECVITVT 358
SGA I + + + E +T+T
Sbjct: 227 MSGAHIKIGNQAEGAGERHVTIT 249
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 78/179 (43%), Gaps = 22/179 (12%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQA--SGAQIDVDDT--------KDNRDECV--- 354
+ +R++ P ++ G +IGK G IK IR++ GA I + N+ V
Sbjct: 102 VTLRLVIPASQCGSLIGKAGTKIKEIRESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQ 161
Query: 355 ---ITVTAIESPDDIKSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSII 411
+T T + + S AV D T + LV + +IGC+IG+ GS I
Sbjct: 162 YGAVTPTEVTKLQQLSSHAVPFATPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKI 221
Query: 412 NEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDG 470
+EIR+ + A ++I + A + V + G S+ AL Q ++ + K G
Sbjct: 222 SEIRQMSGAHIKIGN----QAEGAGERHVTITGSPVSI--ALAQYLITACLETAKSTSG 274
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 62/121 (51%), Gaps = 21/121 (17%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
L +R+L ++G +IGK G T+K IR+ S A+I + + + E + T+T
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE--GSCPERITTITG------ST 69
Query: 368 SMAVEAVLLLQTKINDED------------DDTVTIRLLVSSKVIGCIIGKSGSIINEIR 415
+ AV ++ K+ DED VT+RL++ + G +IGK+G+ I EIR
Sbjct: 70 AAVFHAVSMIAFKL-DEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIR 128
Query: 416 K 416
+
Sbjct: 129 E 129
>gi|410979294|ref|XP_003996020.1| PREDICTED: far upstream element-binding protein 3 [Felis catus]
Length = 572
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 138/341 (40%), Gaps = 42/341 (12%)
Query: 315 PFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDE--CVITVT--AIESPDDIKSMA 370
P +G +IG+GG I I+ SG +I + E CV+T T +IE +
Sbjct: 85 PDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPESIEQAKRLLGQI 144
Query: 371 VEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKAD-VRISKGDK 429
V+ ND D ++ +L+ + +G +IGK G I ++++RT V I G
Sbjct: 145 VDRCRNGPGFHNDIDGNSTIQEILIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPL 204
Query: 430 PKCADANDELVEVVGEVGSVRDALVQIILRLRDDA-LKDRDGSRNPPVGADHIYSS---- 484
P AD + +V R+ +++II R +D A + G N VG I S
Sbjct: 205 PTGADKPLRITGDPFKVQQAREMVLEII-REKDQADFRGVRGDFNARVGGGSIEVSVPRF 263
Query: 485 --------------------GTGISMPPLLPSIPP-----VGPLGYDQRADSGSGIGMLS 519
G I P P +GP Q A +L+
Sbjct: 264 AVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGVSPERAAQVMGPPDRCQHAAHVINELILT 323
Query: 520 SSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANI 579
+ G+G L++ +S GG+ + VPA+ G VIGK G N+ +I
Sbjct: 324 AQERDGFGGLAVARGRGRGRGDWSVGAPGGV---QEITYTVPADKCGLVIGKGGENIKSI 380
Query: 580 RKISGATIEMSDSKSSRGD---RVALISGTPEQKRAAENLI 617
+ SGA +E+ + D RV I G P+Q A +LI
Sbjct: 381 NQQSGAHVELQRNPPPSTDPSLRVFTIRGVPQQIEVARHLI 421
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%)
Query: 554 LTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAA 613
+T E VP VG +IG+ G ++ I+ SG I+++ S +R +++GTPE A
Sbjct: 78 ITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPESIEQA 137
Query: 614 ENLI 617
+ L+
Sbjct: 138 KRLL 141
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 74/164 (45%), Gaps = 24/164 (14%)
Query: 44 PDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFN 103
PD ++G +IG+ G+ I+ I+ E+ ++++ G +R +
Sbjct: 85 PDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLT---------------G 129
Query: 104 DKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIK 163
E + A+ L ++ N D D +E IL+P+S+ +IGK G TIK
Sbjct: 130 TPESIEQAKRLLGQIVDRCRNGPGFHNDIDGNSTIQE---ILIPASKVGLVIGKGGETIK 186
Query: 164 RLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKA 207
+L+ +T + V +D PT + D + I+G+ V++A
Sbjct: 187 QLQERTGVKM-VMIQDGPLPTGA-----DKPLRITGDPFKVQQA 224
Score = 38.5 bits (88), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 537 GSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSR 596
G +++++ GG ++EV VP AVG VIG+ G + I+ +G I+
Sbjct: 242 GVRGDFNARVGGG-----SIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGVS 296
Query: 597 GDRVALISGTPEQKRAAENLIQAFIM 622
+R A + G P++ + A ++I I+
Sbjct: 297 PERAAQVMGPPDRCQHAAHVINELIL 322
>gi|194753778|ref|XP_001959187.1| GF12183 [Drosophila ananassae]
gi|190620485|gb|EDV36009.1| GF12183 [Drosophila ananassae]
Length = 511
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 88/181 (48%), Gaps = 20/181 (11%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
E +R+L P + G VIGKGG I+ +R A + VDD++ E I ++A DI
Sbjct: 22 EETVRILIPSSIAGAVIGKGGQHIQKMRTQYKATVSVDDSQG--PERTIQISA-----DI 74
Query: 367 KSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISK 426
+S ++ K +E D+ +RLL+ + GC+IGK G I EIR R R K
Sbjct: 75 ESTL--EIITEMLKYFEERDEDFDVRLLIHQSLAGCVIGKGGQKIKEIRDRIGC--RFLK 130
Query: 427 GDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDD----ALKDRDGSRNPPVGADHIY 482
+ D +V+ VG+ V +A+ ++I RD A+ + D P+ D +Y
Sbjct: 131 VFSNVAPQSTDRVVQTVGKQSQVIEAVREVITLTRDTPIRGAIHNYD-----PMNFDRVY 185
Query: 483 S 483
+
Sbjct: 186 A 186
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 64/143 (44%), Gaps = 33/143 (23%)
Query: 26 NEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVT 85
++K + EE+V RIL P + G+VIGK G+ I +R + +A V V D +R +
Sbjct: 14 DQKRNRRTEETV--RILIPSSIAGAVIGKGGQHIQKMRTQYKATVSVDD--SQGPERTIQ 69
Query: 86 IYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQIL 145
I + ++ ++ + +LK ++R E + ++L
Sbjct: 70 ISADIESTLEIITE---------------MLKYF--------------EERDEDFDVRLL 100
Query: 146 VPSSQSANIIGKAGATIKRLRSK 168
+ S + +IGK G IK +R +
Sbjct: 101 IHQSLAGCVIGKGGQKIKEIRDR 123
Score = 39.7 bits (91), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 53/110 (48%), Gaps = 14/110 (12%)
Query: 131 DNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAME 190
D + R+ +E +IL+PSS + +IGK G I+++R++ + ++ V D+ P + +
Sbjct: 14 DQKRNRRTEETVRILIPSSIAGAVIGKGGQHIQKMRTQYKATVSV--DDSQGPERTIQIS 71
Query: 191 FDNFVLISGESEAVKKALFAISAIMYKFSPR-EDIPLETTVREAPPSIII 239
D ++ L I+ ++ F R ED + + ++ +I
Sbjct: 72 AD-----------IESTLEIITEMLKYFEERDEDFDVRLLIHQSLAGCVI 110
>gi|269784927|ref|NP_001161615.1| NOVA-like protein [Saccoglossus kowalevskii]
gi|268054231|gb|ACY92602.1| NOVA-like protein [Saccoglossus kowalevskii]
Length = 516
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 100/455 (21%), Positives = 178/455 (39%), Gaps = 84/455 (18%)
Query: 32 GNEES-VIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV---DPFPGAKDRVVTIY 87
GN+++ I ++L P GSVIGK G+ + +++ET A +K+ D +PG +RVV I
Sbjct: 40 GNDDNKYILKMLIPSAAAGSVIGKGGQTVVQLQRETGANIKLSKSNDYYPGTSERVVLIT 99
Query: 88 SHVKDKEDVEVDDEFNDKEPLCAAQDALL-KVHAAIANAVANATDNDKKRKEKEECQILV 146
V E L A + ++ KV + A ++ ++ + +I++
Sbjct: 100 GTV---------------ESLTAVGNFVIEKVRDSPQLAAKTGNESAVSQERARQVKIII 144
Query: 147 PSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVL-ISGESEAVK 205
P+S + IIGK GATIK +T + ++++ K S + VL ISGE +A K
Sbjct: 145 PNSTAGLIIGKGGATIKAFMEQTGSKLQISQK-------SEGVNLSERVLTISGEGDANK 197
Query: 206 KALFA-ISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPIL----- 259
KA+ A IS + + P + P+ P GGL P +
Sbjct: 198 KAMNAVISKVQEDPQSGSCNNISYAAVSGPIANASPTGSPFAEAGGLVNVKQPQMSLHTG 257
Query: 260 PSRSVPSILGAARVPDLQGYADTG-----------------------NTWPVYSTGLSLV 296
P+ +P++ +P L G + T NT Y ++ +
Sbjct: 258 PTAGMPTM--GVGIPTLSGLSPTSAARVISAGASYPGGDAAAINAAMNTLASYGYNINAL 315
Query: 297 SGLVGASQSEELVI------------RVLCPFN---------KIGRVIGKGGGTIKSIRQ 335
+VG+ S L +L P+ G +R
Sbjct: 316 GSMVGSGTSHLLTTLGSSAAAAPLPSSILGPYQAAHAAAAAAAASASAAAANGASPPLRN 375
Query: 336 ASGAQIDVDDTKDNRDECVI----TVTAIESPDDIKSMAVEAVLLLQTKINDEDDDTVTI 391
+GA + + + + A + S+ A T+++ + T+
Sbjct: 376 GAGAGYEAATAVNGGTGLTMPTEGALPAFGALGSFGSLGSLATFGSGTELSKDAAKDSTL 435
Query: 392 RLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISK 426
+ V ++G I+GK G + E ++ + A ++ISK
Sbjct: 436 EIEVPETLVGAILGKGGKTLVEFQQCSGARIQISK 470
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 89/175 (50%), Gaps = 13/175 (7%)
Query: 300 VGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD----NRDECVI 355
+G + + ++++L P G VIGKGG T+ +++ +GA I + + D + V+
Sbjct: 38 IGGNDDNKYILKMLIPSAAAGSVIGKGGQTVVQLQRETGANIKLSKSNDYYPGTSERVVL 97
Query: 356 TVTAIESPDDIKSMAVEAVL---LLQTKINDE----DDDTVTIRLLVSSKVIGCIIGKSG 408
+ES + + +E V L K +E + +++++ + G IIGK G
Sbjct: 98 ITGTVESLTAVGNFVIEKVRDSPQLAAKTGNESAVSQERARQVKIIIPNSTAGLIIGKGG 157
Query: 409 SIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDD 463
+ I ++T + ++IS+ K + + ++ ++ + GE + + A+ +I ++++D
Sbjct: 158 ATIKAFMEQTGSKLQISQ--KSEGVNLSERVLTISGEGDANKKAMNAVISKVQED 210
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS---SRGDRVALISGTPEQKRA 612
L++L+P+ A G VIGK G + +++ +GA I++S S +RV LI+GT E A
Sbjct: 48 LKMLIPSAAAGSVIGKGGQTVVQLQRETGANIKLSKSNDYYPGTSERVVLITGTVESLTA 107
Query: 613 AENLI 617
N +
Sbjct: 108 VGNFV 112
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
Query: 371 VEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKP 430
VE+ + +T I DD+ +++L+ S G +IGK G + ++++ T A++++SK +
Sbjct: 28 VESGIPKRTNIGGNDDNKYILKMLIPSAAAGSVIGKGGQTVVQLQRETGANIKLSKSND- 86
Query: 431 KCADANDELVEVVGEVGSVRDALVQIILRLRDD 463
++ +V + G V S+ +I ++RD
Sbjct: 87 YYPGTSERVVLITGTVESLTAVGNFVIEKVRDS 119
Score = 39.3 bits (90), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 47/84 (55%), Gaps = 5/84 (5%)
Query: 510 DSGSGIGMLSSSSLYGYGSL-SMGDSPYGSMSSYSS--KLYGGLPPPLTLEVLVPANAVG 566
+ G+G+ M + +L +G+L S G GS++++ S +L TLE+ VP VG
Sbjct: 388 NGGTGLTMPTEGALPAFGALGSFGS--LGSLATFGSGTELSKDAAKDSTLEIEVPETLVG 445
Query: 567 KVIGKAGSNLANIRKISGATIEMS 590
++GK G L ++ SGA I++S
Sbjct: 446 AILGKGGKTLVEFQQCSGARIQIS 469
>gi|195440454|ref|XP_002068057.1| GK10610 [Drosophila willistoni]
gi|194164142|gb|EDW79043.1| GK10610 [Drosophila willistoni]
Length = 363
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 147/340 (43%), Gaps = 45/340 (13%)
Query: 36 SVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKED 95
++ R++ +GS+IGK G+++N R+E+ A++ + D +R+VT+
Sbjct: 23 TLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDG--SCPERIVTVSGTTS---- 76
Query: 96 VEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANII 155
A A + + D K K + +++VP+SQ ++I
Sbjct: 77 --------------AIFSAFTLITKKFEEWCSQFNDVGKVGKTQIPIRLIVPASQCGSLI 122
Query: 156 GKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIM 215
GK+G+ IK +R T SI+V + T + V +SG +E + + ++ I +M
Sbjct: 123 GKSGSKIKEIRQTTGCSIQVASEMLPNST-------ERAVTLSGSAEQITQCIYQICLVM 175
Query: 216 YKFSPR-EDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVP 274
+ PR IP + P I+ ++ + G Y A P P AA
Sbjct: 176 LESPPRGATIPYRPKPQVTGPVIL--ANGQAFTIQGNY--AVPTQEVAKNPLASLAALGL 231
Query: 275 DLQGYADTGNTWPVYSTGLSLVSG----LVGASQSEELVIRVLCPFNKIGRVIGKGGGTI 330
A TG ++ L+ ++G A+++++ + + IG +IGKGG I
Sbjct: 232 AGMNPASTGGIN--HTAALAALAGSQLRTANANRAQQQQHEMTVSNDLIGCIIGKGGTKI 289
Query: 331 KSIRQASGAQIDVDDTKD----NRDECVITVTAIESPDDI 366
IRQ SGA I + + ++ N D T+T +PD +
Sbjct: 290 AEIRQISGAMIRISNCEEREGGNTDR---TITISGNPDSV 326
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 90/198 (45%), Gaps = 33/198 (16%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
L IR++ ++G +IGK G + R+ SGA+I++ D + E ++TV+ S
Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISD--GSCPERIVTVSGTTS----- 76
Query: 368 SMAVEAVLLLQTKINDE-----------DDDTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
A+ + L TK +E + IRL+V + G +IGKSGS I EIR+
Sbjct: 77 --AIFSAFTLITKKFEEWCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQ 134
Query: 417 RTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPV 476
T ++++ P ++ + V + G + + QI L + + +PP
Sbjct: 135 TTGCSIQVASEMLP---NSTERAVTLSGSAEQITQCIYQICLVMLE----------SPPR 181
Query: 477 GADHIYSSGTGISMPPLL 494
GA Y ++ P +L
Sbjct: 182 GATIPYRPKPQVTGPVIL 199
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 381 INDEDDD-TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDEL 439
I ED T+TIRL++ K +G IIGK G I+N R+ + A + IS G P + +
Sbjct: 15 IKHEDPSVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCP------ERI 68
Query: 440 VEVVGEVGSVRDALVQIILRLRDDALKDRD 469
V V G ++ A I + + + D
Sbjct: 69 VTVSGTTSAIFSAFTLITKKFEEWCSQFND 98
Score = 45.8 bits (107), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 557 EVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRG---DRVALISGTPEQKRAA 613
E+ V + +G +IGK G+ +A IR+ISGA I +S+ + G DR ISG P+ A
Sbjct: 270 EMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALA 329
Query: 614 ENLIQAFI 621
+ LI I
Sbjct: 330 QYLINMRI 337
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 42/69 (60%), Gaps = 3/69 (4%)
Query: 393 LLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDA 452
+ VS+ +IGCIIGK G+ I EIR+ + A +RIS ++ + + D + + G SV A
Sbjct: 271 MTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGN-TDRTITISGNPDSV--A 327
Query: 453 LVQIILRLR 461
L Q ++ +R
Sbjct: 328 LAQYLINMR 336
Score = 38.9 bits (89), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEM-SDSKSSRGDRVALISGTPEQ 609
+ ++VPA+ G +IGK+GS + IR+ +G +I++ S+ + +R +SG+ EQ
Sbjct: 109 IRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLPNSTERAVTLSGSAEQ 163
>gi|255719726|ref|XP_002556143.1| KLTH0H06050p [Lachancea thermotolerans]
gi|238942109|emb|CAR30281.1| KLTH0H06050p [Lachancea thermotolerans CBS 6340]
Length = 392
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 138/318 (43%), Gaps = 37/318 (11%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTA-IESPDDIKS 368
+R+LC + ++G GG I +++ + +I+V D E VI + E +
Sbjct: 58 LRMLCLVKQASMIVGPGGEKISRMKEETNTRINVSDNIRGVPERVIFIRGRCEDVAKVFG 117
Query: 369 MAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGD 428
M V A+ + E T+T+ +L+ ++GC+IG+ GS + EI + + A +
Sbjct: 118 MVVRAINGETDGESSEQSATLTLNILIPHHMMGCVIGRQGSRLREIEELSAAKLMAGPQT 177
Query: 429 KPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSGTGI 488
P +ND ++ V G V DA + I + + + S
Sbjct: 178 LPM---SNDRILCVSG----VADA-IHIATYYVGQTILNHKAT---------FASKKCIF 220
Query: 489 SMPPLLPSIPPVG---PLGYDQRADSGSG------IGMLSSSSLYGYGSLSMGDSPYGSM 539
+P LL S+ L + Q+ G + S+S +GY + +P+ ++
Sbjct: 221 YLPSLLHSVLVNSYGVSLQHQQQHQYRPGENGKKRLHRYSASPDFGYAYPGVPSAPHMAV 280
Query: 540 SSY-------SSKLYGGLPPPLTL---EVLVPANAVGKVIGKAGSNLANIRKISGATIEM 589
+ ++ + L P L+L EV + N VG VIGK G ++ +I++ +G +I++
Sbjct: 281 HNVRVADTLAAATIPPALAPQLSLIQQEVYIDDNYVGNVIGKGGKHINSIKETTGCSIQI 340
Query: 590 SDSKSSRGDRVALISGTP 607
D +R LI GTP
Sbjct: 341 DDHVEGCSERKILIRGTP 358
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 69/341 (20%), Positives = 133/341 (39%), Gaps = 63/341 (18%)
Query: 27 EKDEKGNE---ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRV 83
E ++ GNE + + R+LC ++G G+ I+ +++ET R+ V D G +RV
Sbjct: 43 ETNDPGNEINKDYIHLRMLCLVKQASMIVGPGGEKISRMKEETNTRINVSDNIRGVPERV 102
Query: 84 VTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKE-EC 142
+ I +D + KV + A+ TD + +
Sbjct: 103 IFIRGRCED----------------------VAKVFGMVVRAINGETDGESSEQSATLTL 140
Query: 143 QILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESE 202
IL+P +IG+ G+ ++ + + + P+ + M D + +SG ++
Sbjct: 141 NILIPHHMMGCVIGRQGSRLREIEELSAAKLMAGPQ-------TLPMSNDRILCVSGVAD 193
Query: 203 AVKKALFAISAIMYK----FSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPI 258
A+ A + + + F+ ++ I PS++ V Y +
Sbjct: 194 AIHIATYYVGQTILNHKATFASKKCIFY-------LPSLLHSVLVNSYGVSLQHQQQHQY 246
Query: 259 LPSRSVPSILGAARVPDLQGYADTGNTWP---------VYSTGL--SLVSGLVGASQSEE 307
P + G R+ D G +P V++ + +L + + + + +
Sbjct: 247 RPGEN-----GKKRLHRYSASPDFGYAYPGVPSAPHMAVHNVRVADTLAAATIPPALAPQ 301
Query: 308 LVI---RVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDD 345
L + V N +G VIGKGG I SI++ +G I +DD
Sbjct: 302 LSLIQQEVYIDDNYVGNVIGKGGKHINSIKETTGCSIQIDD 342
>gi|148229933|ref|NP_001086212.1| MGC84166 protein [Xenopus laevis]
gi|49256273|gb|AAH74333.1| MGC84166 protein [Xenopus laevis]
Length = 225
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 97/192 (50%), Gaps = 17/192 (8%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDD-- 365
L IR+L ++G +IGK G T+K +R+ SGA+I++ + N E ++T+T P D
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG---PTDAI 68
Query: 366 IKSMAVEAVLLLQTKINDEDDDT------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
K+ A+ A + IN + T VT+RL+V + G +IGK GS I EIR+ T
Sbjct: 69 FKAFAMIAYKFEEDIINSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 128
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNP-PVGA 478
A V+++ P ++ + V + G ++ + QI + + + K P P A
Sbjct: 129 AQVQVAGDMLP---NSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASA 185
Query: 479 DHIYSSGTGISM 490
I++ G S+
Sbjct: 186 PVIFAGGQAYSI 197
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 88/201 (43%), Gaps = 42/201 (20%)
Query: 29 DEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYS 88
E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R+VTI
Sbjct: 6 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTI-- 61
Query: 89 HVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIA--------NAVANATDNDKKRKEKE 140
DA+ K A IA N+++N+T K
Sbjct: 62 --------------------TGPTDAIFKAFAMIAYKFEEDIINSMSNSTATSKP---PV 98
Query: 141 ECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGE 200
+++VP+SQ ++IGK G+ IK +R T ++V T + V ISG
Sbjct: 99 TLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNST-------ERAVTISGT 151
Query: 201 SEAVKKALFAISAIMYKFSPR 221
+A+ + + I +M + P+
Sbjct: 152 PDAIIQCVKQICVVMLESPPK 172
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+TIRLL+ K +G IIGK G + ++R+ + A + IS+G+ P + +V + G
Sbjct: 13 TLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCP------ERIVTITGPTD 66
Query: 448 SVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
++ A I + +D ++ + + PPV
Sbjct: 67 AIFKAFAMIAYKFEEDIINSMSNSTATSKPPV 98
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Query: 552 PPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMS-DSKSSRGDRVALISGTPE 608
PP+TL ++VPA+ G +IGK GS + IR+ +GA ++++ D + +R ISGTP+
Sbjct: 96 PPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPD 153
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 40/66 (60%), Gaps = 3/66 (4%)
Query: 302 ASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDV-DDTKDNRDECVITVTAI 360
A+ + +R++ P ++ G +IGKGG IK IR+++GAQ+ V D N E +T++
Sbjct: 92 ATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISG- 150
Query: 361 ESPDDI 366
+PD I
Sbjct: 151 -TPDAI 155
>gi|126308261|ref|XP_001367379.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
[Monodelphis domestica]
Length = 577
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 149/332 (44%), Gaps = 47/332 (14%)
Query: 292 GLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRD 351
G +V+G Q ++ +R+L P +G +IGK G TI++I + + ++IDV K+N
Sbjct: 180 GSPVVAGAPSKQQPVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDV-HRKENAG 238
Query: 352 ECVITVTAIESPDDIKSMAVEAVLLLQTKIND-EDDDTVTIRLLVSSKVIGCIIGKSGSI 410
++ +P+ S + ++Q + D + D V +++L + +G +IGK G
Sbjct: 239 AAEKAISVHSTPEGCSSACKMILEIMQKEAKDTKTADEVPLKILAHNNFVGRLIGKEGRN 298
Query: 411 INEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDG 470
+ ++ + T+ + IS + + + V G + + A +I+ ++R+ D
Sbjct: 299 LKKVEQDTETKITISSLQDLTLYNP-ERTITVKGSIENCCKAEQEIMKKVREAYEND--- 354
Query: 471 SRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLS 530
V A + S L+P + + G+ SSS++ S
Sbjct: 355 -----VAAMSLQSH--------LIPGL-----------NLAAVGLFPASSSAVPPPPSSV 390
Query: 531 MGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATI--- 587
G +PY S + P ++V +PA AVG +IGK G ++ + + + A+I
Sbjct: 391 SGAAPYSS--------FMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIA 442
Query: 588 --EMSDSKSSRGDRVALISGTPEQKRAAENLI 617
E DSK R+ +I+G PE + A+ I
Sbjct: 443 PPETPDSKV----RMVIITGPPEAQFKAQGRI 470
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 79/164 (48%), Gaps = 20/164 (12%)
Query: 306 EELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVD--DTKDNRDECVITVTAIESP 363
E+ +++V P +G +IGK G IK + + + A I + +T D++ VI I P
Sbjct: 404 EQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVI----ITGP 459
Query: 364 DDIKSMA---VEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKA 420
+ + A + L + +++ + + V + G +IGK G +NE++ T A
Sbjct: 460 PEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAA 519
Query: 421 DVRISKGDKPKCADANDE-LVEVVGEVGS-------VRDALVQI 456
+V + + P D N++ +V+++G + +RD L Q+
Sbjct: 520 EVVVPRDQTP---DENEQVIVKIIGHFYASQMAQRKIRDILAQV 560
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 95/248 (38%), Gaps = 67/248 (27%)
Query: 28 KDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKV---VDPFPGAKDRVV 84
KD K +E V +IL + +G +IGK G+ + + Q+T ++ + D +R +
Sbjct: 269 KDTKTADE-VPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYNPERTI 327
Query: 85 TIYSHVKDKEDVEVDDEFNDKEPLCAA-QDALLKVHAAIANAVANATDNDK--------- 134
T+ + E C A Q+ + KV A N VA +
Sbjct: 328 TVKGSI---------------ENCCKAEQEIMKKVREAYENDVAAMSLQSHLIPGLNLAA 372
Query: 135 ----------------------------KRKEKEECQILVPSSQSANIIGKAGATIKRLR 166
+ E+E Q+ +P+ IIGK G IK+L
Sbjct: 373 VGLFPASSSAVPPPPSSVSGAAPYSSFMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLS 432
Query: 167 SKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYK---FSPRED 223
SIK+ P + P M V+I+G EA KA I + + F P+E+
Sbjct: 433 RFASASIKIAPPET--PDSKVRM-----VIITGPPEAQFKAQGRIYGKLKEENFFGPKEE 485
Query: 224 IPLETTVR 231
+ LET +R
Sbjct: 486 VKLETHIR 493
Score = 43.1 bits (100), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 24/148 (16%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDP-FPGAKDRVVTIYSHVKDK 93
E + ++ P +G++IGK G+ I + + A +K+ P P +K R+V I
Sbjct: 404 EQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVII------- 456
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
+A K I + K + K E I VP+S +
Sbjct: 457 ---------------TGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGR 501
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+IGK G T+ L++ T + V P+D +
Sbjct: 502 VIGKGGKTVNELQNLTAAEV-VVPRDQT 528
>gi|291575150|ref|NP_065151.2| poly(rC)-binding protein 4 isoform a [Homo sapiens]
gi|114587204|ref|XP_001170813.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Pan troglodytes]
gi|16877720|gb|AAH17098.1| PCBP4 protein [Homo sapiens]
gi|119585570|gb|EAW65166.1| poly(rC) binding protein 4, isoform CRA_b [Homo sapiens]
Length = 360
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 118/265 (44%), Gaps = 38/265 (14%)
Query: 384 EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVV 443
E T+T+R+L+ K +G IIGK G + IR+++ A + IS+G P + + +
Sbjct: 13 ELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCP------ERITTIT 66
Query: 444 GEVGSVRDALVQIILRLRDDALKDRDGSRN---PPVG----------ADHIYSSGTGI-- 488
G +V A+ I +L +D N PPV I +GT I
Sbjct: 67 GSTAAVFHAVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKE 126
Query: 489 --SMPPLLPSIP--PVGPLGY-----DQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSM 539
PP +IP P LG +Q G ++ + + LS P+ +
Sbjct: 127 IRESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSSHAVPFATP 186
Query: 540 SSYSSKLYGGLPPPL---TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSR 596
S + GL P + E LVP + +G VIG+ GS ++ IR++SGA I++ +
Sbjct: 187 S-----VVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGA 241
Query: 597 GDRVALISGTPEQKRAAENLIQAFI 621
G+R I+G+P A+ LI A +
Sbjct: 242 GERHVTITGSPVSIALAQYLITACL 266
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 72/323 (22%), Positives = 119/323 (36%), Gaps = 90/323 (27%)
Query: 36 SVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKED 95
++ R+L +GS+IGK G+ + IR+++ AR+ + + +R+ TI
Sbjct: 17 TLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE--GSCPERITTITGSTAAVFH 74
Query: 96 VEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANII 155
F E LCAA + + ++++P+SQ ++I
Sbjct: 75 AVSMIAFKLDEDLCAA-----------------PANGGNVSRPPVTLRLVIPASQCGSLI 117
Query: 156 GKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIM 215
GKAG IK +R PK A+ P H ++ +L + + +V+ A+
Sbjct: 118 GKAGTKIKEIRES-------PPKGATIPYHP-SLSLGTVLLSANQGFSVQGQYGAV---- 165
Query: 216 YKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPD 275
+P E L+ A P PS VP GL P
Sbjct: 166 ---TPAEVTKLQQLSSHAVP-FATPSVVP-----GLDPGTQ------------------- 197
Query: 276 LQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQ 335
+ S+E ++ P + IG VIG+ G I IRQ
Sbjct: 198 ---------------------------TSSQEFLV----PNDLIGCVIGRQGSKISEIRQ 226
Query: 336 ASGAQIDVDDTKDNRDECVITVT 358
SGA I + + + E +T+T
Sbjct: 227 MSGAHIKIGNQAEGAGERHVTIT 249
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 79/173 (45%), Gaps = 24/173 (13%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
L +R+L ++G +IGK G T+K IR+ S A+I + + + E + T+T
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE--GSCPERITTITG------ST 69
Query: 368 SMAVEAVLLLQTKINDED------------DDTVTIRLLVSSKVIGCIIGKSGSIINEIR 415
+ AV ++ K+ DED VT+RL++ + G +IGK+G+ I EIR
Sbjct: 70 AAVFHAVSMIAFKL-DEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIR 128
Query: 416 KRTKADVRISKGDKPKCAD---ANDELVEVVGEVGSVRDALVQIILRLRDDAL 465
+ I + ++ V G+ G+V A V + +L A+
Sbjct: 129 ESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSSHAV 181
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 80/179 (44%), Gaps = 22/179 (12%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQA--SGAQIDVDDT--------KDNRDECVITV 357
+ +R++ P ++ G +IGK G IK IR++ GA I + N+ V
Sbjct: 102 VTLRLVIPASQCGSLIGKAGTKIKEIRESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQ 161
Query: 358 TAIESPDDI---KSMAVEAVLLLQTKIN---DEDDDTVTIRLLVSSKVIGCIIGKSGSII 411
+P ++ + ++ AV + D T + LV + +IGC+IG+ GS I
Sbjct: 162 YGAVTPAEVTKLQQLSSHAVPFATPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKI 221
Query: 412 NEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDG 470
+EIR+ + A ++I + A + V + G S+ AL Q ++ + K G
Sbjct: 222 SEIRQMSGAHIKIGN----QAEGAGERHVTITGSPVSI--ALAQYLITACLETAKSTSG 274
>gi|196001809|ref|XP_002110772.1| hypothetical protein TRIADDRAFT_54022 [Trichoplax adhaerens]
gi|190586723|gb|EDV26776.1| hypothetical protein TRIADDRAFT_54022 [Trichoplax adhaerens]
Length = 560
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 151/324 (46%), Gaps = 32/324 (9%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
E +R+L P +G +IG+ G TI+SI Q + A++DV +++ +T + +PD
Sbjct: 137 EFPLRILVPTEMVGAIIGREGNTIRSITQQTQARVDVHR-RESLGSAEKAITILGTPDSC 195
Query: 367 KSMAVEAVLLLQTKINDEDDD------------TVTIRLLVSSKVIGCIIGKSGSIINEI 414
S A++ ++Q+++ + + +++L + +IG +IGK+G++I I
Sbjct: 196 TSAALQIAKIMQSELLSTNPQLKLKVEQGHPIPNIPLKILAHNNLIGRLIGKNGNVIKSI 255
Query: 415 RKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNP 474
+T + + ISK + K ++ + V+G V + A + +LR +D S P
Sbjct: 256 MNQTNSKITISKLEDLKSG-YSERTITVIGTVENSSRAEALLSAKLRSYYKQDM-ASMIP 313
Query: 475 PVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDS 534
+S + S PL S +DSGS ++ S+++ LS+ +S
Sbjct: 314 QRQGQSSANSNSNGSSYPLSNSTT-------SSVSDSGS---LIDSAAI---SPLSIPNS 360
Query: 535 PYGSMSSYSSKLYGGLPPPLTLE---VLVPANAVGKVIGKAGSNLANIRKISGATIEMSD 591
P G S+ S L +E + +P VIG G+ L + +ISGA++++
Sbjct: 361 PSGLFSNNSVFLENDNVQSDEIETTAIYIPIQTFNYVIGARGNQLPALEQISGASLQLVQ 420
Query: 592 SK-SSRGDRVALISGTPEQKRAAE 614
S S +R +++G + A+
Sbjct: 421 SMYSGANERKVVVNGNASSQWKAQ 444
Score = 42.7 bits (99), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 54/99 (54%), Gaps = 14/99 (14%)
Query: 532 GDSPYGSMSSYSSKLYGGLPPP----LTLEVLVPANAVGKVIGKAGSNLANIRKISGATI 587
S + + S +K+ GL P L E+LVP+ VG++IGK GS + ++ +GA I
Sbjct: 437 ASSQWKAQLSIFNKVGEGLTPSEELSLRTEILVPSPLVGRIIGKGGSTVRQLQSQTGAMI 496
Query: 588 E----MSDSKSSRGDRVAL-ISGTPEQKRAAENLIQAFI 621
E M+D GD+V++ I GT +AA+ I++ I
Sbjct: 497 EIPRGMAD-----GDKVSVHIKGTFLASQAAQRRIRSII 530
Score = 42.4 bits (98), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%), Gaps = 3/64 (4%)
Query: 283 GNTWPVYSTGLSLVSGL-VGASQSEELVIR--VLCPFNKIGRVIGKGGGTIKSIRQASGA 339
GN + LS+ + + G + SEEL +R +L P +GR+IGKGG T++ ++ +GA
Sbjct: 435 GNASSQWKAQLSIFNKVGEGLTPSEELSLRTEILVPSPLVGRIIGKGGSTVRQLQSQTGA 494
Query: 340 QIDV 343
I++
Sbjct: 495 MIEI 498
>gi|387915114|gb|AFK11166.1| heterogeneous nuclear ribonucleoprotein K [Callorhinchus milii]
Length = 436
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 101/394 (25%), Positives = 153/394 (38%), Gaps = 86/394 (21%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTA-IESPDDIKS 368
+R+L G VIGKGG IKS+R A + V D+ E ++++ A IE+ DI S
Sbjct: 50 LRLLLQSKNAGAVIGKGGKNIKSLRTDYNASVSVPDSSG--PERILSINADIETIGDILS 107
Query: 369 M---AVEAVLLLQTKINDED-------DDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRT 418
+E V + E D +R+LV G IIG G I E+R+ T
Sbjct: 108 KIIPTLEEVRCVHFHHLQESYQHYKGKDFDCELRMLVHQSQAGSIIGVKGVKIKELREST 167
Query: 419 KADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGA 478
+ +++ + C + D +V + G+ V + + I+ L + +K R +P
Sbjct: 168 QTTIKLFQ---ECCPHSTDRVVLLGGKPDRVVECIKIIMGLLSESPVKGRAQPYDPNF-Y 223
Query: 479 DHIYSSGTGISM---------------------PP------LLPSIPPVGPLG------- 504
D Y G G +M PP P PP GP+G
Sbjct: 224 DETYDYG-GFTMMFDERGRRGMPFGPRGRGGPHPPSPGYERRGPMGPPRGPVGRPIPPPR 282
Query: 505 ---YD----------------QRADSGSGIGMLSSSSLYG-------YGSLSMGDSPYGS 538
YD R G I G YG +G Y
Sbjct: 283 RDAYDDMSPPPRRGPPPPLSRSRNARGGRIPPPPPPPPRGSDRDRGMYGRSRLGADRYDG 342
Query: 539 MSSYSSKLYGGLP----PPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS 594
M GG P +T +V +P + G +IGK G + IR SGA+I++ +
Sbjct: 343 MGISGYGGRGGYGDLGGPVITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLE 402
Query: 595 SRGDRVALISGTPEQKRAAENLIQ----AFIMAT 624
DR+ I+GT +Q + A+ L+Q +F M +
Sbjct: 403 GSEDRIITITGTQDQIQNAQYLLQNSCSSFFMTS 436
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 85/188 (45%), Gaps = 20/188 (10%)
Query: 28 KDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIY 87
K + N++ V R+L G+VIGK GK I S+R + A V V D +R+++I
Sbjct: 39 KRSRNNDQCVELRLLLQSKNAGAVIGKGGKNIKSLRTDYNASVSVPD--SSGPERILSIN 96
Query: 88 SHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVP 147
+ ++ D+ L L +V + + + + K + E ++LV
Sbjct: 97 ADIETIGDI-----------LSKIIPTLEEVRCVHFHHLQESYQHYKGKDFDCELRMLVH 145
Query: 148 SSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKA 207
SQ+ +IIG G IK LR T+T+IK+ C D VL+ G+ + V +
Sbjct: 146 QSQAGSIIGVKGVKIKELRESTQTTIKLF-------QECCPHSTDRVVLLGGKPDRVVEC 198
Query: 208 LFAISAIM 215
+ I ++
Sbjct: 199 IKIIMGLL 206
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 33/50 (66%)
Query: 37 VIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTI 86
+ ++ P + GS+IGK G+ I IR E+ A +K+ +P G++DR++TI
Sbjct: 362 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITI 411
Score = 42.0 bits (97), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 6/72 (8%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
+ +V P + G +IGKGG IK IR SGA I +D+ + ++ +IT+T + D I+
Sbjct: 362 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQ--DQIQ 419
Query: 368 SMAVEAVLLLQT 379
+ A LLQ
Sbjct: 420 N----AQYLLQN 427
>gi|148222025|ref|NP_001090223.1| neuro-oncological ventral antigen 2 [Xenopus laevis]
gi|49256115|gb|AAH72959.1| Nova1 protein [Xenopus laevis]
Length = 413
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 97/200 (48%), Gaps = 35/200 (17%)
Query: 302 ASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD-----NRDECVIT 356
A++ EL ++VL P G +IGKGG TI +++ +GA I + +KD C++
Sbjct: 28 AAEDGELFLKVLIPSYAAGSIIGKGGQTIVQLQRETGATIKLSKSKDFYPGTTERVCLVQ 87
Query: 357 VTAIESPDDIKSMAVEAV-------------LLL--QTKINDEDDDTVTIRLLVSSKVIG 401
+A E+ + + E V +LL Q+ IN E +L+V + G
Sbjct: 88 GSA-EALLSVHNFIAEKVREVPQGAPKNDLGVLLPPQSTINAERAKQA--KLIVPNTTAG 144
Query: 402 CIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLR 461
IIGK G+ + I + + A V++S+ KP ++ ++ +V V GE V+ A+ II + R
Sbjct: 145 LIIGKGGATVRNIMEESGAWVQLSQ--KPAGSNLHERVVTVSGEPSQVQKAIHSIIHKSR 202
Query: 462 DDALKDRDGSRNPPVGADHI 481
+D PP G H+
Sbjct: 203 ED----------PPQGTTHL 212
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 101/224 (45%), Gaps = 53/224 (23%)
Query: 23 RRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV---DPFPGA 79
+R N E G + ++L P GS+IGK G+ I +++ET A +K+ D +PG
Sbjct: 23 KRSNTAAEDGE---LFLKVLIPSYAAGSIIGKGGQTIVQLQRETGATIKLSKSKDFYPGT 79
Query: 80 KDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAV----ANATDNDK- 134
+RV + + +ALL VH IA V A ND
Sbjct: 80 TERVCLVQ----------------------GSAEALLSVHNFIAEKVREVPQGAPKNDLG 117
Query: 135 ---------KRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTH 185
+ ++ +++VP++ + IIGK GAT++ + ++ ++++ K A H
Sbjct: 118 VLLPPQSTINAERAKQAKLIVPNTTAGLIIGKGGATVRNIMEESGAWVQLSQKPAGSNLH 177
Query: 186 SCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETT 229
+ V +SGE V+K AI +I++K RED P TT
Sbjct: 178 ------ERVVTVSGEPSQVQK---AIHSIIHK--SREDPPQGTT 210
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Query: 554 LTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS---SRGDRVALISGTPEQK 610
L L+VL+P+ A G +IGK G + +++ +GATI++S SK +RV L+ G+ E
Sbjct: 34 LFLKVLIPSYAAGSIIGKGGQTIVQLQRETGATIKLSKSKDFYPGTTERVCLVQGSAEAL 93
Query: 611 RAAENLI 617
+ N I
Sbjct: 94 LSVHNFI 100
>gi|225429818|ref|XP_002280789.1| PREDICTED: poly(rC)-binding protein 3-like [Vitis vinifera]
Length = 420
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 143/336 (42%), Gaps = 39/336 (11%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSM 369
R++ P + +G +IG+ G IK I + +GA+I V +C++ ++A E P S
Sbjct: 29 FRLIVPGSAVGSIIGREGKIIKRISEGTGARIHVISLPAGTTDCIVLISAKEQPHLRLSP 88
Query: 370 AVEAVLLLQTKIND-------------EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
A+EAV+ + ++ + ++ LV IIGK GS + I +
Sbjct: 89 AMEAVIEVFKRVTGLYPIDGNGMCSKASEVKLSSVTFLVGYSQALSIIGKEGSRVRAIEE 148
Query: 417 RTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPV 476
+ V I P ++ ++++ G+V V A+ ++ LR L D S P
Sbjct: 149 SSGTTVGI-LSRVPFYVSPDERIIKIQGQVLKVMAAMEAVLYHLR---LYLVDSSVIPAF 204
Query: 477 GADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPY 536
TGIS S+ P + ADS + S L G+ + P
Sbjct: 205 SEK----CKTGISQADQSLSLHHSTP-AHQPGADS------MYSLPLLGHEAKVEAKIPS 253
Query: 537 GSMSSYSSK-LYGGL----------PPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGA 585
S Y+ + + GGL P T + +P +A +IG AG + +IR+ SG+
Sbjct: 254 SYSSLYAQEPVLGGLPLRRSDRAAAPAQRTERIKIPFSAAKDIIGIAGETIDHIRRTSGS 313
Query: 586 TIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFI 621
I + + +S + + + GT Q + A+ LI+ +
Sbjct: 314 IITIEEDRSLPDEYILEVRGTTSQLQTAQQLIEELL 349
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 147/349 (42%), Gaps = 40/349 (11%)
Query: 39 YRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEV 98
+R++ P +GS+IG+ GK+I I + T AR+ V+ G D +V I + KE +
Sbjct: 29 FRLIVPGSAVGSIIGREGKIIKRISEGTGARIHVISLPAGTTDCIVLISA----KEQPHL 84
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAV---ANATDNDKKRKEKEECQILVPSSQSANII 155
L A +A+++V + N + + LV SQ+ +II
Sbjct: 85 R--------LSPAMEAVIEVFKRVTGLYPIDGNGMCSKASEVKLSSVTFLVGYSQALSII 136
Query: 156 GKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIM 215
GK G+ ++ + + T++ + + P + E + I G+ V K + A+ A++
Sbjct: 137 GKEGSRVRAIEESSGTTVGILSR---VPFYVSPDE--RIIKIQGQ---VLKVMAAMEAVL 188
Query: 216 YKFS---------PREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPS 266
Y P +T + +A S+ + P + PG + P+L +
Sbjct: 189 YHLRLYLVDSSVIPAFSEKCKTGISQADQSLSLHHSTPAHQPGADSMYSLPLLGHEAKVE 248
Query: 267 ILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKG 326
A++P Y+ PV GL L A+ ++ R+ PF+ +IG
Sbjct: 249 ----AKIPS--SYSSLYAQEPVLG-GLPLRRSDRAAAPAQR-TERIKIPFSAAKDIIGIA 300
Query: 327 GGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVL 375
G TI IR+ SG+ I +++ + DE ++ V S +E +L
Sbjct: 301 GETIDHIRRTSGSIITIEEDRSLPDEYILEVRGTTSQLQTAQQLIEELL 349
>gi|291400301|ref|XP_002716510.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 2-like
isoform 2 [Oryctolagus cuniculus]
Length = 556
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/322 (22%), Positives = 137/322 (42%), Gaps = 62/322 (19%)
Query: 301 GASQSEE--LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
G+SQ+ + +R+L P +G +IGK G TIK+I + + +++D+ K+N VT
Sbjct: 185 GSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDI-HRKENSGAAEKPVT 243
Query: 359 AIESPDDIKSMAVEAVLLLQTKINDEDD--DTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
+P+ S A +L + K DE + + +++L + ++G +IGK G + +I
Sbjct: 244 IHATPEGT-SEACRMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEH 302
Query: 417 RTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPV 476
T + IS + + + V G V + A +I+ +LR+ D
Sbjct: 303 ETGTKITISSLQDLSIYNP-ERTITVKGTVEACASAEAEIMKKLREAFEND--------- 352
Query: 477 GADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPY 536
ML+ ++ GY S +
Sbjct: 353 ----------------------------------------MLAVNTHSGYFSSLYPHHQF 372
Query: 537 GSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS-S 595
G + S P + + +P AVG +IGK G+++ + + +GA+I+++ ++
Sbjct: 373 GPFPHHHS-----YPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPD 427
Query: 596 RGDRVALISGTPEQKRAAENLI 617
+R+ +I+G PE + A+ I
Sbjct: 428 VSERMVIITGPPEAQFKAQGRI 449
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 99/218 (45%), Gaps = 23/218 (10%)
Query: 27 EKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKV---VDPFPGAKDRV 83
E DE E + +IL +G++G +IGK G+ + I ET ++ + D +R
Sbjct: 265 EADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERT 324
Query: 84 VTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKV--HAAIANAVANATD-----NDKKR 136
+T+ V+ E + +E A ++ +L V H+ +++ +
Sbjct: 325 ITVKGTVEACASAEAEIMKKLRE---AFENDMLAVNTHSGYFSSLYPHHQFGPFPHHHSY 381
Query: 137 KEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVL 196
E+E + +P+ IIGK GA IK+L SIK+ P + + + + V+
Sbjct: 382 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVS-------ERMVI 434
Query: 197 ISGESEAVKKALFAISAIMYK---FSPREDIPLETTVR 231
I+G EA KA I + + F+P+E++ LE +R
Sbjct: 435 ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIR 472
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 80/350 (22%), Positives = 142/350 (40%), Gaps = 48/350 (13%)
Query: 142 CQILVPSSQSANIIGKAGATIKRLRSKTRT-----------------SIKVTPKDASEPT 184
+ILVP+ IIGK G TIK + +T++ +I TP+ SE
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTSE-- 253
Query: 185 HSCAMEFDNFVLISGESEAVKKA------LFAISAIMYKFSPREDIPLETTVREAPPSII 238
+C M + ++ E++ K A + A + ++ + +E L+ E I
Sbjct: 254 -ACRMILE---IMQKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKIT 309
Query: 239 IPS--DVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLV 296
I S D+ IY P + S + + + NT Y + L
Sbjct: 310 ISSLQDLSIYNPERTITVKGTVEACASAEAEIMKKLREAFENDMLAVNTHSGYFSSLYPH 369
Query: 297 SGL----VGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTK--DNR 350
S E+ ++ + P +G +IGK G IK + + +GA I + + D
Sbjct: 370 HQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVS 429
Query: 351 DECVITVTAIESPDDIKSMA---VEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKS 407
+ VI I P + + A + L + N +++ + + V S G +IGK
Sbjct: 430 ERMVI----ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKG 485
Query: 408 GSIINEIRKRTKADVRISKGDKPKCADANDE-LVEVVGEVGSVRDALVQI 456
G +NE++ T A+V + + P D N+E +V ++G + + A +I
Sbjct: 486 GKTVNELQNLTSAEVIVPRDQTP---DENEEVIVRIIGHFFASQTAQRKI 532
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 58/148 (39%), Gaps = 24/148 (16%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPF-PGAKDRVVTIYSHVKDK 93
E I + P +G++IGK G I + + A +K+ P +R+V I
Sbjct: 383 EQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII------- 435
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
+A K I + + K + K E I VPSS +
Sbjct: 436 ---------------TGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGR 480
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+IGK G T+ L++ T + + P+D +
Sbjct: 481 VIGKGGKTVNELQNLTSAEV-IVPRDQT 507
>gi|307199010|gb|EFN79734.1| Poly(rC)-binding protein 3 [Harpegnathos saltator]
Length = 469
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 153/355 (43%), Gaps = 68/355 (19%)
Query: 305 SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPD 364
S L IR++ ++G +IGK G +K R+ SGA+I++ D + E ++TVT P
Sbjct: 12 SVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISD--GSCPERIVTVTG---PT 66
Query: 365 DIKSMAVEAVLLLQTKINDEDDDT------------------VTIRLLVSSKVIGCIIGK 406
+ +A L+ K + +T+RL+V + G +IGK
Sbjct: 67 N---SIFKAFTLICKKFEEWCSQFHDIQGGGAGGGGGVSRPPITLRLIVPASQCGSLIGK 123
Query: 407 SGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALK 466
GS I EIR+ T A ++++ P ++ + V + G +A+ Q I + L+
Sbjct: 124 GGSKIKEIREVTGASIQVASEMLP---NSTERAVTISG----TSEAITQCIYHICCVMLE 176
Query: 467 DRDGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRAD----SGSGIGMLSSSS 522
+PP GA Y + P +L G Y + + + S +G L S+
Sbjct: 177 ------SPPKGATIPYRPKPQVGGPVIL-----AGGQAYTIQGNYAVPAHSDMGKLGSNP 225
Query: 523 LYGYGSLSM----------GDSPYGSMSSYSSKLYGG-------LPPPLTLEVLVPANAV 565
L +L + G +P + S+L T E+ VP +
Sbjct: 226 LASLAALGLGGLATPANTGGLNPAALAALAGSQLRTSNTNRQQPAANNQTHEMTVPNELI 285
Query: 566 GKVIGKAGSNLANIRKISGATIEMSDSKSSRG---DRVALISGTPEQKRAAENLI 617
G +IGK G+ +A IR+ISGA I +S+ + G DR I+G P+ A+ LI
Sbjct: 286 GCIIGKGGTKIAEIRQISGAMIRISNCEEREGGATDRTITITGNPDAVALAQYLI 340
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 94/382 (24%), Positives = 159/382 (41%), Gaps = 64/382 (16%)
Query: 36 SVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKD--K 93
++ R++ +GS+IGK G+++ R+E+ A++ + D +R+VT+ K
Sbjct: 14 TLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDG--SCPERIVTVTGPTNSIFK 71
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
+ +F E C+ + A V+ + +++VP+SQ +
Sbjct: 72 AFTLICKKF---EEWCSQFHDIQGGGAGGGGGVS---------RPPITLRLIVPASQCGS 119
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISA 213
+IGK G+ IK +R T SI+V + T + V ISG SEA+ + ++ I
Sbjct: 120 LIGKGGSKIKEIREVTGASIQVASEMLPNST-------ERAVTISGTSEAITQCIYHICC 172
Query: 214 IMYKFSPR-EDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAAR 272
+M + P+ IP + P I+ Y G Y +P+ S LG+
Sbjct: 173 VMLESPPKGATIPYRPKPQVGGPVILAGGQA--YTIQGNY-----AVPAHSDMGKLGSNP 225
Query: 273 VPDLQGYADTGNTWPVYSTGLSLVSGL-----------------VGASQSEELVIRVLCP 315
+ L G P + GL+ + +Q+ E+ + P
Sbjct: 226 LASLAALGLGGLATPANTGGLNPAALAALAGSQLRTSNTNRQQPAANNQTHEMTV----P 281
Query: 316 FNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECV-ITVTAIESPDDIK------S 368
IG +IGKGG I IRQ SGA I + + ++ T+T +PD + +
Sbjct: 282 NELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGATDRTITITGNPDAVALAQYLIN 341
Query: 369 MAVEAVLLLQTKINDEDDDTVT 390
M+VE LQ K N E +T T
Sbjct: 342 MSVE----LQ-KANLEAQNTQT 358
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 6/89 (6%)
Query: 381 INDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELV 440
+ND+ T+TIRL++ K +G IIGK G I+ R+ + A + IS G P + +V
Sbjct: 7 LNDDPSVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCP------ERIV 60
Query: 441 EVVGEVGSVRDALVQIILRLRDDALKDRD 469
V G S+ A I + + + D
Sbjct: 61 TVTGPTNSIFKAFTLICKKFEEWCSQFHD 89
>gi|198465289|ref|XP_001353580.2| GA20351 [Drosophila pseudoobscura pseudoobscura]
gi|198150092|gb|EAL31093.2| GA20351 [Drosophila pseudoobscura pseudoobscura]
Length = 330
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 138/324 (42%), Gaps = 53/324 (16%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT----AIESP 363
L IR++ ++G +IGK G + R+ SGA+I++ D + E ++TV+ AI S
Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISD--GSCPERIVTVSGTTNAIFSA 81
Query: 364 DDIKSMAVEAVLLLQTKINDEDD---DTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKA 420
+ + E ++ ND + IRL+V + G +IGKSGS I EIR+ T
Sbjct: 82 FTLITKKFEEWC---SQFNDAGKIGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGC 138
Query: 421 DVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADH 480
++++ P ++ + V + G + + QI L + + + ++NP
Sbjct: 139 SIQVASEMLP---NSTERAVTLSGSAEQITQCIYQICLVMLESCPRSTV-AKNPLASLAA 194
Query: 481 IYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMS 540
+ + + P G + A + L+ S L + + M+
Sbjct: 195 LGLA-----------GMNPASTGGINHTA----ALAALAGSQLRTANAANRAQQQQHEMT 239
Query: 541 SYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRG--- 597
V + +G +IGK G+ +A IR+ISGA I +S+ + G
Sbjct: 240 -------------------VSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNT 280
Query: 598 DRVALISGTPEQKRAAENLIQAFI 621
DR ISG P+ A+ LI I
Sbjct: 281 DRTITISGNPDSVALAQYLINMRI 304
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 138/335 (41%), Gaps = 68/335 (20%)
Query: 36 SVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKED 95
++ R++ +GS+IGK G+++N R+E+ A++ + D +R+VT+
Sbjct: 23 TLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDG--SCPERIVTVSGTTN---- 76
Query: 96 VEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANII 155
A A + + D K K + +++VP+SQ ++I
Sbjct: 77 --------------AIFSAFTLITKKFEEWCSQFNDAGKIGKTQIPIRLIVPASQCGSLI 122
Query: 156 GKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIM 215
GK+G+ IK +R T SI+V + T + V +SG +E + + ++ I +M
Sbjct: 123 GKSGSKIKEIRQTTGCSIQVASEMLPNST-------ERAVTLSGSAEQITQCIYQICLVM 175
Query: 216 YKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPD 275
+ PR +TV + P + + + P S I A +
Sbjct: 176 LESCPR------STVAKNPLASLAALGLAGMNPA-------------STGGINHTAALAA 216
Query: 276 LQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQ 335
L G S + A+++++ + + IG +IGKGG I IRQ
Sbjct: 217 LAG---------------SQLRTANAANRAQQQQHEMTVSNDLIGCIIGKGGTKIAEIRQ 261
Query: 336 ASGAQIDVDDTKD----NRDECVITVTAIESPDDI 366
SGA I + + ++ N D T+T +PD +
Sbjct: 262 ISGAMIRISNCEEREGGNTDR---TITISGNPDSV 293
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 7/95 (7%)
Query: 379 TKINDEDDD-TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADAND 437
T I ED T+TIRL++ K +G IIGK G I+N R+ + A + IS G P +
Sbjct: 13 TSIKHEDPSVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCP------E 66
Query: 438 ELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSR 472
+V V G ++ A I + + + D +
Sbjct: 67 RIVTVSGTTNAIFSAFTLITKKFEEWCSQFNDAGK 101
>gi|345486914|ref|XP_001607400.2| PREDICTED: poly(rC)-binding protein 3-like [Nasonia vitripennis]
Length = 476
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 155/350 (44%), Gaps = 57/350 (16%)
Query: 305 SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTA-IESP 363
S L IR++ ++G +IGK G +K R+ SGA+I++ D + E ++TVT S
Sbjct: 17 SVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISD--GSCPERIVTVTGPTNSI 74
Query: 364 DDIKSMAVEAVLLLQTKINDEDDDT------------VTIRLLVSSKVIGCIIGKSGSII 411
++ + ++ +D +T+RL+V + G +IGK GS I
Sbjct: 75 FKAFTLICKKFEEWCSQFHDIQGGGNAGGGGGVPRPPITLRLIVPASQCGSLIGKGGSKI 134
Query: 412 NEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGS 471
EIR+ T A ++++ P ++ + V + G +A+ Q I + L+
Sbjct: 135 KEIREVTGASIQVASEMLP---NSTERAVTISG----TSEAITQCIYHICCVMLE----- 182
Query: 472 RNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRAD----SGSGIGMLSSSSLYGYG 527
+PP GA Y + P +L G + + + + S +G L SS L G
Sbjct: 183 -SPPKGATIPYRPKPQVGGPVIL-----AGGQAFTIQGNYAVPAHSDMGKLGSSPLAGLA 236
Query: 528 SLSM----------GDSPYGSMSSYSSKLY---GGLPPPL----TLEVLVPANAVGKVIG 570
+L + G +P + S+L P T E+ VP +G +IG
Sbjct: 237 ALGLGGLAAPANTGGLNPAALAALAGSQLRTNNANRQQPAANNQTHEMTVPNELIGCIIG 296
Query: 571 KAGSNLANIRKISGATIEMSDSKSSRG---DRVALISGTPEQKRAAENLI 617
K G+ +A IR+ISGA I +S+ + G DR I+G P+ A+ LI
Sbjct: 297 KGGTKIAEIRQISGAMIRISNCEEREGGPTDRTITITGNPDSVALAQYLI 346
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 82/352 (23%), Positives = 144/352 (40%), Gaps = 52/352 (14%)
Query: 36 SVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKED 95
++ R++ +GS+IGK G+++ R+E+ A++ + D +R+VT+
Sbjct: 19 TLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDG--SCPERIVTVTG------- 69
Query: 96 VEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANII 155
+ F +C + I R +++VP+SQ ++I
Sbjct: 70 -PTNSIFKAFTLICKKFEEWCSQFHDIQGGGNAGGGGGVPRPPIT-LRLIVPASQCGSLI 127
Query: 156 GKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIM 215
GK G+ IK +R T SI+V + T + V ISG SEA+ + ++ I +M
Sbjct: 128 GKGGSKIKEIREVTGASIQVASEMLPNST-------ERAVTISGTSEAITQCIYHICCVM 180
Query: 216 YKFSPR-EDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVP 274
+ P+ IP + P I+ + G Y +P+ S LG++ +
Sbjct: 181 LESPPKGATIPYRPKPQVGGPVILAGGQA--FTIQGNY-----AVPAHSDMGKLGSSPLA 233
Query: 275 DLQGYADTGNTWPVYSTGLSLVSGL-----------------VGASQSEELVIRVLCPFN 317
L G P + GL+ + +Q+ E+ + P
Sbjct: 234 GLAALGLGGLAAPANTGGLNPAALAALAGSQLRTNNANRQQPAANNQTHEMTV----PNE 289
Query: 318 KIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNR---DECVITVTAIESPDDI 366
IG +IGKGG I IRQ SGA I + + ++ + IT+T +PD +
Sbjct: 290 LIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGPTDRTITITG--NPDSV 339
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 6/89 (6%)
Query: 381 INDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELV 440
+ND+ T+TIRL++ K +G IIGK G I+ R+ + A + IS G P + +V
Sbjct: 12 LNDDPSVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCP------ERIV 65
Query: 441 EVVGEVGSVRDALVQIILRLRDDALKDRD 469
V G S+ A I + + + D
Sbjct: 66 TVTGPTNSIFKAFTLICKKFEEWCSQFHD 94
>gi|326925691|ref|XP_003209044.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Meleagris gallopavo]
Length = 502
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 151/324 (46%), Gaps = 46/324 (14%)
Query: 301 GASQSEEL--VIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
G SQ ++L +R+L P +G +IGK G TIK++ + + +++D+ K+N +T
Sbjct: 110 GGSQPKQLDFPLRMLVPTQFVGAIIGKEGLTIKNLTKQTQSKVDIHR-KENAGAAEKPIT 168
Query: 359 AIESPDDIKSMAVEAVLLLQTKINDEDD--DTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
+P+ S A +L + K DE + + +++L + ++G +IGK G + +I +
Sbjct: 169 IHATPEGC-SEACRMILDIMQKEADETKSAEEIPLKILAHNSLVGRLIGKEGRNLKKIEQ 227
Query: 417 RTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPV 476
T + IS + + + V G + +A V+I+ +LR+ D
Sbjct: 228 DTGTKITISPLQDLTIYNP-ERTITVKGSTEACSNAEVEIMKKLREAYENDI-------- 278
Query: 477 GADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPY 536
+ +Q+A+ G+ LS+ ++ G LSM S
Sbjct: 279 --------------------------VAVNQQANLIPGLN-LSALGIFSTG-LSMLPSSV 310
Query: 537 GSMSSYSSKLYG--GLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS 594
G+ + ++ Y LP + + +P AVG +IGK G ++ + + +GA+I+++ ++
Sbjct: 311 GARGAAAAAPYHPFALPEQEVVNLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAEG 370
Query: 595 SRG-DRVALISGTPEQKRAAENLI 617
+R+ +I+G PE + A+ I
Sbjct: 371 PDATERMVIITGPPEAQFKAQGRI 394
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 92/425 (21%), Positives = 175/425 (41%), Gaps = 77/425 (18%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKEDVEV 98
R+L P +G++IGK G I ++ ++T+++V + GA ++ +TI++
Sbjct: 122 RMLVPTQFVGAIIGKEGLTIKNLTKQTQSKVDIHRKENAGAAEKPITIHA---------- 171
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
E A +L + A ++ K E+ +IL +S +IGK
Sbjct: 172 -----TPEGCSEACRMILDIMQKEA--------DETKSAEEIPLKILAHNSLVGRLIGKE 218
Query: 159 GATIKRLRSKTRTSIKVTP-KDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYK 217
G +K++ T T I ++P +D + + + + G +EA A
Sbjct: 219 GRNLKKIEQDTGTKITISPLQDLT------IYNPERTITVKGSTEACSNA---------- 262
Query: 218 FSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQ 277
++ + +REA + I+ + GL +A I + G + +P
Sbjct: 263 -----EVEIMKKLREAYENDIVAVNQQANLIPGLNLSALGIFST-------GLSMLPSSV 310
Query: 278 GYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQAS 337
G P + L E+ V+ + P +G +IGK G IK + + +
Sbjct: 311 GARGAAAAAPYHPFAL-----------PEQEVVNLFIPTQAVGAIIGKKGQHIKQLARFA 359
Query: 338 GAQIDVDDTK--DNRDECVITVTAIESPDDIKSMA---VEAVLLLQTKINDEDDDTVTIR 392
GA I + + D + VI I P + + A + L + N +++ +
Sbjct: 360 GASIKIAPAEGPDATERMVI----ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAH 415
Query: 393 LLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDE-LVEVVGEVGSVRD 451
+ V S G +IGK G +NE++ T A+V + + P D N+E +V+++G + +
Sbjct: 416 IKVPSFAAGRVIGKGGKTVNELQNLTSAEVIVPRDQTP---DENEEVIVKIIGHFFASQT 472
Query: 452 ALVQI 456
A +I
Sbjct: 473 AQRKI 477
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 98/236 (41%), Gaps = 39/236 (16%)
Query: 27 EKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAK----DR 82
E DE + E + +IL + ++G +IGK G+ + I Q+T ++ + P +R
Sbjct: 190 EADETKSAEEIPLKILAHNSLVGRLIGKEGRNLKKIEQDTGTKI-TISPLQDLTIYNPER 248
Query: 83 VVTIYSHVKDKEDVEVD-----DEFNDKEPLCAAQDA-------------------LLKV 118
+T+ + + EV+ E + + + Q A +L
Sbjct: 249 TITVKGSTEACSNAEVEIMKKLREAYENDIVAVNQQANLIPGLNLSALGIFSTGLSMLPS 308
Query: 119 HAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPK 178
A A A + E+E + +P+ IIGK G IK+L SIK+ P
Sbjct: 309 SVGARGAAAAAPYHPFALPEQEVVNLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPA 368
Query: 179 DASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYK---FSPREDIPLETTVR 231
+ + T + V+I+G EA KA I + + F+P+E++ LE ++
Sbjct: 369 EGPDAT-------ERMVIITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIK 417
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 59/148 (39%), Gaps = 24/148 (16%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPF-PGAKDRVVTIYSHVKDK 93
E + + P +G++IGK G+ I + + A +K+ P A +R+V I
Sbjct: 328 EQEVVNLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAEGPDATERMVII------- 380
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
+A K I + + K + K E I VPS +
Sbjct: 381 ---------------TGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIKVPSFAAGR 425
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+IGK G T+ L++ T + + P+D +
Sbjct: 426 VIGKGGKTVNELQNLTSAEV-IVPRDQT 452
>gi|344266063|ref|XP_003405100.1| PREDICTED: poly(rC)-binding protein 2-like isoform 1 [Loxodonta
africana]
Length = 360
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 165/352 (46%), Gaps = 39/352 (11%)
Query: 297 SGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVIT 356
+G++ + L IR+L ++G +IGK G ++K +R+ SGA+I++ + N E +IT
Sbjct: 3 TGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIIT 60
Query: 357 VTAIESPDDIKSMAVEAVL-LLQTKINDEDDDT-------VTIRLLVSSKVIGCIIGKSG 408
+ P + A ++ L+ I+ ++ VT+RL+V + G +IGK G
Sbjct: 61 LAG---PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGG 117
Query: 409 SIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDA---- 464
I EIR+ T A V+++ P ++ + + + G S+ + + QI + + + +
Sbjct: 118 CKIKEIRESTGAQVQVAGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLEVSPQAP 174
Query: 465 --LKDRDGSRNPPVGADHIYSSGT-GISMPPLLPSI--------PPVGPLGYD-QRADSG 512
L+ + YS+G+ S P PS+ PP+ Q A
Sbjct: 175 PKLQCIPWRLKSSIYPQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIPQ 234
Query: 513 SGIGMLSSSSL-YGYGSLSMGDSPYGSMSSYSSKL---YGGL---PPPLTLEVLVPANAV 565
+ L ++ + ++ G++ + + S S ++ + GL + E+ +P + +
Sbjct: 235 PDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLI 294
Query: 566 GKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLI 617
G +IG+ G+ + IR++SGA I++++ DR I+G+ A+ LI
Sbjct: 295 GCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLI 346
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 86/373 (23%), Positives = 155/373 (41%), Gaps = 90/373 (24%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH 89
E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R++T
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIIT---- 60
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAV-----ANATDNDKKRKEKEECQI 144
L +A+ K A I + + ++ T++ + ++
Sbjct: 61 ------------------LAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRL 102
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAV 204
+VP+SQ ++IGK G IK +R T ++V T + + I+G +++
Sbjct: 103 VVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNST-------ERAITIAGIPQSI 155
Query: 205 KKALFAISAIMYKFSPREDIPLETTVREAPPSI-IIPSDV--PIYPP--------GGLYP 253
+ + I +M + SP +APP + IP + IYP +P
Sbjct: 156 IECVKQICVVMLEVSP-----------QAPPKLQCIPWRLKSSIYPQDRYSTGSDSASFP 204
Query: 254 NADPIL--------PSRSVPSILGAARVPD-----LQGYADTGNTWPVY--STGLSLV-- 296
+ P + P +I G +P L A + +P+ +TG S +
Sbjct: 205 HTTPSMCLNPDLEGPPLEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSGIES 264
Query: 297 ---------SGLVGASQ--SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDD 345
+GL ++Q S EL I P + IG +IG+ G I IRQ SGAQI + +
Sbjct: 265 SSPEVKGYWAGLDASAQTTSHELTI----PNDLIGCIIGRQGAKINEIRQMSGAQIKIAN 320
Query: 346 TKDNRDECVITVT 358
+ + +T+T
Sbjct: 321 PVEGSTDRQVTIT 333
Score = 43.5 bits (101), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 383 DEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEV 442
D T + L + + +IGCIIG+ G+ INEIR+ + A ++I+ + D V +
Sbjct: 277 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN----PVEGSTDRQVTI 332
Query: 443 VGEVGSVRDALVQIILRLRDD 463
G S+ A I +RL +
Sbjct: 333 TGSAASISLAQYLINVRLSSE 353
>gi|116007842|ref|NP_001036619.1| mushroom-body expressed, isoform D [Drosophila melanogaster]
gi|113194920|gb|ABI31266.1| mushroom-body expressed, isoform D [Drosophila melanogaster]
Length = 539
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 148/351 (42%), Gaps = 66/351 (18%)
Query: 36 SVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKED 95
++ R++ +GS+IGK G+++N R+E+ A++ + D +R+VT+
Sbjct: 23 TLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDG--SCPERIVTVSGTTN---- 76
Query: 96 VEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANII 155
A A + + D K K + +++VP+SQ ++I
Sbjct: 77 --------------AIFSAFTLITKKFEEWCSQFNDVGKVGKTQIPIRLIVPASQCGSLI 122
Query: 156 GKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIM 215
GK+G+ IK +R T SI+V + T + V +SG +E + + ++ I +M
Sbjct: 123 GKSGSKIKEIRQTTGCSIQVASEMLPNST-------ERAVTLSGSAEQITQCIYQICLVM 175
Query: 216 YKFSPR-EDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVP 274
+ PR IP + P +I ++ + G Y +P++ V A+ P
Sbjct: 176 LESPPRGATIPYRPKPQVTGP--VILANGQAFTIQGNYA-----VPTQEV------AKNP 222
Query: 275 DLQGYADTGNTW-PVYSTGLSLVSGLVGASQSEELVIRVLCPFNK--------------I 319
A P + G++ + L + S+ +R P N+ I
Sbjct: 223 LASLAALGLAGMNPASTGGINHTAALAALAGSQ---LRTANPANRAQQQQHEMTVSNDLI 279
Query: 320 GRVIGKGGGTIKSIRQASGAQIDVDDTKD----NRDECVITVTAIESPDDI 366
G +IGKGG I IRQ SGA I + + ++ N D T+T +PD +
Sbjct: 280 GCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDR---TITISGNPDSV 327
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 87/191 (45%), Gaps = 19/191 (9%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT----AIESP 363
L IR++ ++G +IGK G + R+ SGA+I++ D + E ++TV+ AI S
Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISD--GSCPERIVTVSGTTNAIFSA 81
Query: 364 DDIKSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVR 423
+ + E + + IRL+V + G +IGKSGS I EIR+ T ++
Sbjct: 82 FTLITKKFEEWCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQ 141
Query: 424 ISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYS 483
++ P ++ + V + G + + QI L + + PP GA Y
Sbjct: 142 VASEMLP---NSTERAVTLSGSAEQITQCIYQICLVMLES----------PPRGATIPYR 188
Query: 484 SGTGISMPPLL 494
++ P +L
Sbjct: 189 PKPQVTGPVIL 199
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 381 INDEDDD-TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDEL 439
I ED T+TIRL++ K +G IIGK G I+N R+ + A + IS G P + +
Sbjct: 15 IKHEDPSVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCP------ERI 68
Query: 440 VEVVGEVGSVRDALVQIILRLRDDALKDRD 469
V V G ++ A I + + + D
Sbjct: 69 VTVSGTTNAIFSAFTLITKKFEEWCSQFND 98
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 393 LLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDA 452
+ VS+ +IGCIIGK G+ I EIR+ + A +RIS ++ + + D + + G SV A
Sbjct: 272 MTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNT-DRTITISGNPDSV--A 328
Query: 453 LVQIILRL 460
L Q ++ +
Sbjct: 329 LAQYLINM 336
>gi|148223980|ref|NP_001082843.1| uncharacterized protein LOC557028 [Danio rerio]
gi|94732695|emb|CAK10813.1| novel protein similar to human IGF-II mRNA-binding protein 2
(IMP-2) [Danio rerio]
gi|167614340|gb|ABZ89742.1| IGF-II mRNA-binding protein 2b variant 1 [Danio rerio]
gi|167614342|gb|ABZ89743.1| IGF-II mRNA-binding protein 2b variant 2 [Danio rerio]
Length = 436
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 110/474 (23%), Positives = 194/474 (40%), Gaps = 101/474 (21%)
Query: 34 EESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKD 92
++ + RIL P +G++IGK G I +I ++T+++V + GA ++ +TI+S
Sbjct: 26 QQELPLRILVPTQFVGAIIGKEGLTIKNITKQTQSKVDIHRKENAGATEKAITIHS---- 81
Query: 93 KEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSA 152
KE A +L++ AN D K E+ +IL +S
Sbjct: 82 -----------SKEGCSQACRMILEIMEKEAN--------DTKIVEEVPLKILAHNSLVG 122
Query: 153 NIIGKAGATIKRLRSKTRTSIKVTP-KDASEPTHSCAMEFDNFVLISGESEAVKKALFAI 211
+IGK G +K++ T T I ++ +D + + + + G V++ A
Sbjct: 123 RLIGKEGRNLKKIEQDTGTKITISALQDLT------VYNQERTISVRG---GVEECCKAE 173
Query: 212 SAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAA 271
IM K REA + + + GL +A I S G +
Sbjct: 174 GEIMKKL------------REAHENDVASVNQQTNMMAGLNLSALGIFSS-------GMS 214
Query: 272 RVPDLQGYADTGNTWPVYS--TGLSLVSGLVGASQS----------EELVIRVLCPFNKI 319
+P G + +T YS G S++ GL G S E+ V+ + P +
Sbjct: 215 VLPPASGLRGSLSTPANYSPLLGPSIMGGLYGVPSSGALSLQQAGGEQEVVYLFIPTPAV 274
Query: 320 GRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAV-----EAV 374
G +IGK G IK + +GA I + A ESPD+ + M + EA
Sbjct: 275 GALIGKKGQHIKELAHFAGASIKI--------------AAPESPDEPERMVIITGPPEAQ 320
Query: 375 LLLQTKI----------NDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRI 424
Q +I +++ + + V S G +IGK G +NE++ T A+V +
Sbjct: 321 FKAQGRIYGKLKEENFFTAKEEVKLEAHIKVPSTAAGRVIGKGGKTVNELQNLTSAEVIV 380
Query: 425 SKGDKPKCADANDE-LVEVVGEVGSVRDA---LVQIILRLRDDALKDRDGSRNP 474
+ P D ND+ V+++G + + A + +I+ +++ K + + P
Sbjct: 381 PRDQTP---DENDDVFVKIIGHFFASQTAQRKIREIVQQVKQQERKHQQMPQTP 431
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 153/328 (46%), Gaps = 37/328 (11%)
Query: 303 SQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIES 362
+ +EL +R+L P +G +IGK G TIK+I + + +++D+ K+N +T I S
Sbjct: 24 QRQQELPLRILVPTQFVGAIIGKEGLTIKNITKQTQSKVDIHR-KENAGATEKAIT-IHS 81
Query: 363 PDDIKSMAVEAVL-LLQTKINDED-DDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKA 420
+ S A +L +++ + ND + V +++L + ++G +IGK G + +I + T
Sbjct: 82 SKEGCSQACRMILEIMEKEANDTKIVEEVPLKILAHNSLVGRLIGKEGRNLKKIEQDTGT 141
Query: 421 DVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKD---RDGSRNPPVG 477
+ IS + + + V G V A +I+ +LR+ D + N G
Sbjct: 142 KITISALQDLTVYN-QERTISVRGGVEECCKAEGEIMKKLREAHENDVASVNQQTNMMAG 200
Query: 478 ----ADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGI-GMLSSSSLYG--YGSLS 530
A I+SSG + +PP SG+ G LS+ + Y G
Sbjct: 201 LNLSALGIFSSGMSV-LPP-------------------ASGLRGSLSTPANYSPLLGPSI 240
Query: 531 MGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMS 590
MG YG SS + L + + +P AVG +IGK G ++ + +GA+I+++
Sbjct: 241 MGGL-YGVPSSGALSLQQAGGEQEVVYLFIPTPAVGALIGKKGQHIKELAHFAGASIKIA 299
Query: 591 DSKS-SRGDRVALISGTPEQKRAAENLI 617
+S +R+ +I+G PE + A+ I
Sbjct: 300 APESPDEPERMVIITGPPEAQFKAQGRI 327
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 78/195 (40%), Gaps = 30/195 (15%)
Query: 29 DEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDP-FPGAKDRVVTIY 87
+ G E+ V+Y + P +G++IGK G+ I + A +K+ P P +R+V I
Sbjct: 256 QQAGGEQEVVY-LFIPTPAVGALIGKKGQHIKELAHFAGASIKIAAPESPDEPERMVII- 313
Query: 88 SHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVP 147
+A K I + K + K E I VP
Sbjct: 314 ---------------------TGPPEAQFKAQGRIYGKLKEENFFTAKEEVKLEAHIKVP 352
Query: 148 SSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKA 207
S+ + +IGK G T+ L++ T + + P+D + + D FV I G A + A
Sbjct: 353 STAAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPDEND-----DVFVKIIGHFFASQTA 406
Query: 208 LFAISAIMYKFSPRE 222
I I+ + +E
Sbjct: 407 QRKIREIVQQVKQQE 421
>gi|195401727|ref|XP_002059464.1| GJ17213 [Drosophila virilis]
gi|194142470|gb|EDW58876.1| GJ17213 [Drosophila virilis]
Length = 511
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 86/177 (48%), Gaps = 12/177 (6%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
E +R+L P + G VIGKGG I+ +R A + VDD++ E I ++ DI
Sbjct: 21 EETVRILIPSSIAGAVIGKGGQHIQKMRTQYKATVSVDDSQG--PERTIQIST-----DI 73
Query: 367 KSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISK 426
S ++ K +E D+ +RLL+ + GC+IGK G I EIR R R K
Sbjct: 74 DSTL--EIITEMLKYFEERDEEFDVRLLIHQSLAGCVIGKGGQKIKEIRDRIGC--RFLK 129
Query: 427 GDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYS 483
+ D +V+ VG+ V DA+ ++I RD +K + + P+ D +Y+
Sbjct: 130 VFSNVAPQSTDRVVQTVGKQSQVIDAVREVITLTRDTPIKGPIHNYD-PMNFDRVYA 185
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 69/155 (44%), Gaps = 38/155 (24%)
Query: 14 NDRDGKNQKRRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV 73
ND DG ++R + NEE+V RIL P + G+VIGK G+ I +R + +A V V
Sbjct: 6 NDGDGPQDQKR-----NRRNEETV--RILIPSSIAGAVIGKGGQHIQKMRTQYKATVSVD 58
Query: 74 DPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDND 133
D +R + I + + D+ L++ +
Sbjct: 59 D--SQGPERTIQISTDI----------------------DSTLEIITEMLKYF------- 87
Query: 134 KKRKEKEECQILVPSSQSANIIGKAGATIKRLRSK 168
++R E+ + ++L+ S + +IGK G IK +R +
Sbjct: 88 EERDEEFDVRLLIHQSLAGCVIGKGGQKIKEIRDR 122
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 39/70 (55%)
Query: 131 DNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAME 190
D + R+ +E +IL+PSS + +IGK G I+++R++ + ++ V E T + +
Sbjct: 13 DQKRNRRNEETVRILIPSSIAGAVIGKGGQHIQKMRTQYKATVSVDDSQGPERTIQISTD 72
Query: 191 FDNFVLISGE 200
D+ + I E
Sbjct: 73 IDSTLEIITE 82
>gi|147789222|emb|CAN69137.1| hypothetical protein VITISV_022037 [Vitis vinifera]
Length = 587
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 84/160 (52%), Gaps = 20/160 (12%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIE----- 361
+ R+LC ++IG VIGK G +K ++ +GA+I V+D+ D VI V A
Sbjct: 50 HVAFRLLCHASRIGGVIGKSGVIVKQLQSDTGARIRVEDSPSTSDHRVILVIAPASVNRR 109
Query: 362 -----SPDDIK-SMAVEAVLLLQTKINDED--------DDTVTIRLLVSSKVIGCIIGKS 407
S ++++ S A EAVL + +I + V+ RLL + +G +IGK
Sbjct: 110 IALQGSSEEVEASAAQEAVLRVFERILEVAAVVDGVPPGGVVSCRLLAETSQVGSVIGKG 169
Query: 408 GSIINEIRKRTKADVRISKGDK-PKCADANDELVEVVGEV 446
G ++ +IR+ + + +++ +K P CA + DE+VE G +
Sbjct: 170 GKVVEKIRRESGSKIKVLTAEKLPTCAASTDEMVEHSGSL 209
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 83/166 (50%), Gaps = 6/166 (3%)
Query: 37 VIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDV 96
V +R+LC IG VIGKSG ++ ++ +T AR++V D + RV+ + + +
Sbjct: 51 VAFRLLCHASRIGGVIGKSGVIVKQLQSDTGARIRVEDSPSTSDHRVILVIAPASVNRRI 110
Query: 97 EVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIG 156
+ + E AAQ+A+L+V I VA D C++L +SQ ++IG
Sbjct: 111 ALQGSSEEVEA-SAAQEAVLRVFERILE-VAAVVDGVPP-GGVVSCRLLAETSQVGSVIG 167
Query: 157 KAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESE 202
K G ++++R ++ + IKV +E +CA D V SG E
Sbjct: 168 KGGKVVEKIRRESGSKIKVL---TAEKLPTCAASTDEMVEHSGSLE 210
>gi|356528013|ref|XP_003532600.1| PREDICTED: poly(rC)-binding protein 3-like [Glycine max]
Length = 167
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 81/145 (55%), Gaps = 7/145 (4%)
Query: 305 SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPD 364
+ + R+LC +++G +IGK G IKS+++A+GA+I + D + + VI V+A +
Sbjct: 22 TTHVTFRLLCHASRVGAIIGKSGVLIKSLQEATGAKIRIVDAPPDSPDRVILVSAPSVTE 81
Query: 365 DIK-SMAVEAVLLLQTKIND------EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKR 417
D + S A EA+L + ++ D D V+ RLL + +G +IGK+G ++ +IR
Sbjct: 82 DGELSTAQEALLKVFDRVLDVAAGTEVGDLVVSCRLLAETSQVGAVIGKAGKVVEKIRMD 141
Query: 418 TKADVRISKGDKPKCADANDELVEV 442
T +R+ P +DE+VEV
Sbjct: 142 TGCKIRVLNEGLPAGTAPSDEIVEV 166
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 75/139 (53%), Gaps = 15/139 (10%)
Query: 37 VIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDV 96
V +R+LC +G++IGKSG +I S+++ T A++++VD P + DRV+ + + V
Sbjct: 25 VTFRLLCHASRVGAIIGKSGVLIKSLQEATGAKIRIVDAPPDSPDRVILVSA-----PSV 79
Query: 97 EVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIG 156
D E L AQ+ALLKV + + A D C++L +SQ +IG
Sbjct: 80 TEDGE------LSTAQEALLKVFDRVLDVAAGTEVGDLVVS----CRLLAETSQVGAVIG 129
Query: 157 KAGATIKRLRSKTRTSIKV 175
KAG ++++R T I+V
Sbjct: 130 KAGKVVEKIRMDTGCKIRV 148
>gi|45553235|ref|NP_996145.1| mushroom-body expressed, isoform C [Drosophila melanogaster]
gi|194876029|ref|XP_001973701.1| GG16232 [Drosophila erecta]
gi|195496648|ref|XP_002095782.1| GE22592 [Drosophila yakuba]
gi|16648354|gb|AAL25442.1| LD32520p [Drosophila melanogaster]
gi|45446078|gb|AAS65095.1| mushroom-body expressed, isoform C [Drosophila melanogaster]
gi|190655484|gb|EDV52727.1| GG16232 [Drosophila erecta]
gi|194181883|gb|EDW95494.1| GE22592 [Drosophila yakuba]
gi|220951950|gb|ACL88518.1| mub-PC [synthetic construct]
Length = 364
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 148/351 (42%), Gaps = 66/351 (18%)
Query: 36 SVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKED 95
++ R++ +GS+IGK G+++N R+E+ A++ + D +R+VT+
Sbjct: 23 TLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDG--SCPERIVTVSGTTN---- 76
Query: 96 VEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANII 155
A A + + D K K + +++VP+SQ ++I
Sbjct: 77 --------------AIFSAFTLITKKFEEWCSQFNDVGKVGKTQIPIRLIVPASQCGSLI 122
Query: 156 GKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIM 215
GK+G+ IK +R T SI+V + T + V +SG +E + + ++ I +M
Sbjct: 123 GKSGSKIKEIRQTTGCSIQVASEMLPNST-------ERAVTLSGSAEQITQCIYQICLVM 175
Query: 216 YKFSPR-EDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVP 274
+ PR IP + P I+ ++ + G Y +P++ V A+ P
Sbjct: 176 LESPPRGATIPYRPKPQVTGPVIL--ANGQAFTIQGNYA-----VPTQEV------AKNP 222
Query: 275 DLQGYADTGNTW-PVYSTGLSLVSGLVGASQSEELVIRVLCPFNK--------------I 319
A P + G++ + L + S+ +R P N+ I
Sbjct: 223 LASLAALGLAGMNPASTGGINHTAALAALAGSQ---LRTANPANRAQQQQHEMTVSNDLI 279
Query: 320 GRVIGKGGGTIKSIRQASGAQIDVDDTKD----NRDECVITVTAIESPDDI 366
G +IGKGG I IRQ SGA I + + ++ N D T+T +PD +
Sbjct: 280 GCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDR---TITISGNPDSV 327
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 88/191 (46%), Gaps = 19/191 (9%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT----AIESP 363
L IR++ ++G +IGK G + R+ SGA+I++ D + E ++TV+ AI S
Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISD--GSCPERIVTVSGTTNAIFSA 81
Query: 364 DDIKSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVR 423
+ + E + + IRL+V + G +IGKSGS I EIR+ T ++
Sbjct: 82 FTLITKKFEEWCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQ 141
Query: 424 ISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYS 483
++ P ++ + V + G + + QI L + + +PP GA Y
Sbjct: 142 VASEMLP---NSTERAVTLSGSAEQITQCIYQICLVMLE----------SPPRGATIPYR 188
Query: 484 SGTGISMPPLL 494
++ P +L
Sbjct: 189 PKPQVTGPVIL 199
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 381 INDEDDD-TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDEL 439
I ED T+TIRL++ K +G IIGK G I+N R+ + A + IS G P + +
Sbjct: 15 IKHEDPSVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCP------ERI 68
Query: 440 VEVVGEVGSVRDALVQIILRLRDDALKDRD 469
V V G ++ A I + + + D
Sbjct: 69 VTVSGTTNAIFSAFTLITKKFEEWCSQFND 98
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 42/69 (60%), Gaps = 3/69 (4%)
Query: 393 LLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDA 452
+ VS+ +IGCIIGK G+ I EIR+ + A +RIS ++ + + D + + G SV A
Sbjct: 272 MTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGN-TDRTITISGNPDSV--A 328
Query: 453 LVQIILRLR 461
L Q ++ +R
Sbjct: 329 LAQYLINMR 337
>gi|296213265|ref|XP_002753197.1| PREDICTED: poly(rC)-binding protein 2-like isoform 1 [Callithrix
jacchus]
Length = 342
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 147/330 (44%), Gaps = 37/330 (11%)
Query: 297 SGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVIT 356
+G++ + L IR+L ++G +IGK G ++K +R+ SGA+I++ + N E +IT
Sbjct: 3 TGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIIT 60
Query: 357 VTAIESPDD--IKSMAV------EAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSG 408
+ P + K+ A+ E + T VT+ L+V + G +IGK G
Sbjct: 61 LAG---PTNAIFKAFAMIIDKLEEDIRSSMTNSTAASRPPVTLSLVVPASQCGSLIGKGG 117
Query: 409 SIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDR 468
I EIR+ T A V+++ P ++ + + + G S+ + + QI + + + K
Sbjct: 118 CKIKEIRESTGAQVQVAGDMLP---NSTERAITIAGIPQSIIECVKQIFVVMLESPPKGV 174
Query: 469 DGSRNP-PVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYG 527
P P + I++ G ++ +IP Q A S M +G
Sbjct: 175 TIPYRPKPSSSPVIFAGGQAYTIQGQY-AIPQPDLTKLHQLAIQQSHFPM-----THGNT 228
Query: 528 SLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATI 587
S G +S+ E+ +P + +G +IG+ G+ + IR++SGA I
Sbjct: 229 GFSAGLDASAQTTSH--------------ELTIPNDLIGCIIGRQGAKINEIRQMSGAQI 274
Query: 588 EMSDSKSSRGDRVALISGTPEQKRAAENLI 617
++++ DR I+G+ A+ LI
Sbjct: 275 KIANPVEGSTDRQVTITGSAASISLAQYLI 304
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 143/339 (42%), Gaps = 64/339 (18%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH 89
E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R++T
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIIT---- 60
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAV-----ANATDNDKKRKEKEECQI 144
L +A+ K A I + + ++ T++ + +
Sbjct: 61 ------------------LAGPTNAIFKAFAMIIDKLEEDIRSSMTNSTAASRPPVTLSL 102
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAV 204
+VP+SQ ++IGK G IK +R T ++V T + + I+G +++
Sbjct: 103 VVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNST-------ERAITIAGIPQSI 155
Query: 205 KKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSV 264
+ + I +M + P+ T+ P PS P+ GG A I ++
Sbjct: 156 IECVKQIFVVMLESPPKG-----VTIPYRPK----PSSSPVIFAGG---QAYTIQGQYAI 203
Query: 265 PSILGAARVPDL---QGYADTGNTWPVYSTGLSLVSGLVGASQ--SEELVIRVLCPFNKI 319
P PDL A + +P+ +GL ++Q S EL I P + I
Sbjct: 204 PQ-------PDLTKLHQLAIQQSHFPMTHGNTGFSAGLDASAQTTSHELTI----PNDLI 252
Query: 320 GRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
G +IG+ G I IRQ SGAQI + + + + +T+T
Sbjct: 253 GCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTIT 291
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 89/226 (39%), Gaps = 68/226 (30%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDV-DDTKDNRDE-------------- 352
+ + ++ P ++ G +IGKGG IK IR+++GAQ+ V D N E
Sbjct: 98 VTLSLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIE 157
Query: 353 CV--ITVTAIESP--------------------------------------DDIKSMAVE 372
CV I V +ESP + +A++
Sbjct: 158 CVKQIFVVMLESPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAIQ 217
Query: 373 AVLLLQTKIN-------DEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRIS 425
T N D T + L + + +IGCIIG+ G+ INEIR+ + A ++I+
Sbjct: 218 QSHFPMTHGNTGFSAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIA 277
Query: 426 KGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGS 471
+ D V + G S+ +L Q ++ +R + GS
Sbjct: 278 N----PVEGSTDRQVTITGSAASI--SLAQYLINVRLSLVTGGMGS 317
>gi|156388117|ref|XP_001634548.1| predicted protein [Nematostella vectensis]
gi|156221632|gb|EDO42485.1| predicted protein [Nematostella vectensis]
Length = 338
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 95/373 (25%), Positives = 148/373 (39%), Gaps = 103/373 (27%)
Query: 31 KGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVD--------PFPGAKDR 82
+G+ +++ +++ IGS+IGK G I RQE+ A + + D G KD
Sbjct: 21 RGHSSNLVLKMIMQGKDIGSIIGKEGSTIKQFRQESNAHINISDGSTPERIVSVTGTKDA 80
Query: 83 VVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEEC 142
VVT ++ + K ++DE +N+ +N T R
Sbjct: 81 VVTAFALIGQK----LEDELK-------------------SNSKSNTTPPVTLR------ 111
Query: 143 QILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEF-----DNFVLI 197
++VP SQ +IIGK GA IK +R + S+ V A EF + V +
Sbjct: 112 -LIVPGSQCGSIIGKGGAKIKEIREVSGASVVV------------AGEFLPGSSERAVTL 158
Query: 198 SGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIY-PPGGL-YPNA 255
SG EA++ + + +M +F PR P+ T + + Y PP G YP
Sbjct: 159 SGTPEALETCIDLLCGVMIEFPPRGH-PMPYTPHK------LQQQFGFYGPPQGFGYPG- 210
Query: 256 DPILPSRSVPSILGA----ARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIR 311
P + P+ A P+ S ++++ G VG+
Sbjct: 211 -PYGMPHAFPNGFMAGRGPYGGGRKGKGPPPPQPGPITSHTMTILKGAVGS--------- 260
Query: 312 VLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTK--DNRDECVITVTAIESPDDIKSM 369
+IG+ G I IRQ SGA I + D++ D++ E +IT TA
Sbjct: 261 ----------IIGQKGSYITGIRQMSGASIKIGDSENGDDKREVLITGTA---------- 300
Query: 370 AVEAVLLLQTKIN 382
EAV L Q IN
Sbjct: 301 --EAVGLAQFLIN 311
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 41/65 (63%), Gaps = 2/65 (3%)
Query: 555 TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAE 614
T+ +L AVG +IG+ GS + IR++SGA+I++ DS++ R LI+GT E A+
Sbjct: 250 TMTIL--KGAVGSIIGQKGSYITGIRQMSGASIKIGDSENGDDKREVLITGTAEAVGLAQ 307
Query: 615 NLIQA 619
LI A
Sbjct: 308 FLINA 312
>gi|326934067|ref|XP_003213117.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Meleagris gallopavo]
Length = 553
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 151/335 (45%), Gaps = 54/335 (16%)
Query: 292 GLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRD 351
G + +G Q ++ +R+L P +G +IGK G TI++I + + ++IDV K+N
Sbjct: 157 GSPVTAGAPVKQQPVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHR-KENAG 215
Query: 352 ECVITVTAIESPDDIKSMAVEAVLLLQTKIND-EDDDTVTIRLLVSSKVIGCIIGKSGSI 410
++ +P+ + + ++Q + D + D V +++L + +G +IGK G
Sbjct: 216 AAEKAISIHSTPEGCSAACKMILEIMQKEAKDTKTADEVPLKILAHNNFVGRLIGKEGRN 275
Query: 411 INEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDG 470
+ ++ + T+ + IS + + + V G + + A +I+ ++R+ D
Sbjct: 276 LKKVEQDTETKITISSLQDLTLYNP-ERTITVKGSIENCCKAEQEIMKKVREAYEND--- 331
Query: 471 SRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGML--SSSSLYGYGS 528
V A + S L+P + + + +G+ SS+++ S
Sbjct: 332 -----VAAMSLQSH--------LIPGL-------------NLAAVGLFPASSNAVPPPPS 365
Query: 529 LSMGDSPYGSMSSYSSKLYGGLPPPL-TLEVLVPANAVGKVIGKAGSNLANIRKISGATI 587
G +PY S +PP T+ V +PA AVG +IGK G ++ + + + A+I
Sbjct: 366 SVSGAAPYSSF----------MPPEQETVHVFIPAQAVGAIIGKKGQHIKQLSRFASASI 415
Query: 588 -----EMSDSKSSRGDRVALISGTPEQKRAAENLI 617
E DSK R+ +I+G PE + A+ I
Sbjct: 416 KIAPPETPDSKV----RMVVITGPPEAQFKAQGRI 446
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 95/437 (21%), Positives = 178/437 (40%), Gaps = 96/437 (21%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKEDVEV 98
R+L P +G++IGK G I +I ++T++++ V GA ++ ++I+S
Sbjct: 176 RLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISIHS---------- 225
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
E AA +L++ A D K ++ +IL ++ +IGK
Sbjct: 226 -----TPEGCSAACKMILEIMQKEAK--------DTKTADEVPLKILAHNNFVGRLIGKE 272
Query: 159 GATIKRLRSKTRTSIKVTP-KDAS--EPTHSCAMEFDNFVLISGESEAVKKALFAISAIM 215
G +K++ T T I ++ +D + P + ++ E E +KK A
Sbjct: 273 GRNLKKVEQDTETKITISSLQDLTLYNPERTITVKGSIENCCKAEQEIMKKVREAYE--- 329
Query: 216 YKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYP---NADPILPSRSVPSILGAAR 272
D+ + P + + + GL+P NA P PS S+ GAA
Sbjct: 330 ------NDVAAMSLQSHLIPGLNLAAV-------GLFPASSNAVPPPPS----SVSGAAP 372
Query: 273 VPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKS 332
YS+ + E+ + V P +G +IGK G IK
Sbjct: 373 ----------------YSSFMP----------PEQETVHVFIPAQAVGAIIGKKGQHIKQ 406
Query: 333 IRQASGAQIDVD--DTKDNRDECVITVTAIESPDDIKSMA---VEAVLLLQTKINDEDDD 387
+ + + A I + +T D++ V+ I P + + A + L + +++
Sbjct: 407 LSRFASASIKIAPPETPDSKVRMVV----ITGPPEAQFKAQGRIYGKLKEENFFGPKEEV 462
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDE-LVEVVGEV 446
+ + V + G +IGK G +NE++ T A+V + + P D N++ +V+++G
Sbjct: 463 KLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQTP---DENEQVIVKIIGHF 519
Query: 447 GS-------VRDALVQI 456
+ +RD L Q+
Sbjct: 520 YASQMAQRKIRDILAQV 536
Score = 42.4 bits (98), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 59/148 (39%), Gaps = 24/148 (16%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDP-FPGAKDRVVTIYSHVKDK 93
E + P +G++IGK G+ I + + A +K+ P P +K R+V I
Sbjct: 380 EQETVHVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVVI------- 432
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
+A K I + K + K E I VP+S +
Sbjct: 433 ---------------TGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGR 477
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+IGK G T+ L++ T + V P+D +
Sbjct: 478 VIGKGGKTVNELQNLTAAEV-VVPRDQT 504
>gi|212723546|ref|NP_001131366.1| uncharacterized protein LOC100192689 [Zea mays]
gi|194691330|gb|ACF79749.1| unknown [Zea mays]
gi|413935393|gb|AFW69944.1| hypothetical protein ZEAMMB73_108333 [Zea mays]
Length = 467
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 92/336 (27%), Positives = 146/336 (43%), Gaps = 54/336 (16%)
Query: 298 GLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTK--DNRDECVI 355
G GAS V R++ P +K+G +IG+ G TIK + + A++ V D D ++
Sbjct: 93 GWPGAS-----VFRLVVPADKVGGIIGRRGDTIKRLCDETRARVRVLDAPHGDGAFSRIV 147
Query: 356 TVTAIESPDDIKSMAVEAVLLLQTKINDEDD------------DTVTIRLLVSSKVIGCI 403
V+A E + S A+ A + + IN+ +D + ++RLLV +
Sbjct: 148 LVSAREEVEAELSPAMNAAIKIFKHINEIEDINSDGTLMAPAPEISSVRLLVPFAQALHV 207
Query: 404 IGKSGSIINEIRKRTKADVRISKGDKPKCADANDE-LVEVVGEVGSVRDALVQIILRLRD 462
IGK G I I++ T + VRI D+ + E +VE+ G V +AL +++L L
Sbjct: 208 IGKQGVTIKSIQESTGSTVRIMDEDELLSHETMGERIVEINGASLEVLNAL-KLVLGLLR 266
Query: 463 DALKDRDGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSS 522
L D G H++ P V Q G+ G S
Sbjct: 267 KFLVDH--------GVLHLFERKN-----------PEVA-----QPQSRGNPKG-----S 297
Query: 523 LYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKI 582
+ YG +PY S S+ L +T + +P VG++IG G N+ IR +
Sbjct: 298 RFLYGHDPSFHAPY---SRDLSQPADSLITKITRTMQIPLADVGEIIGVRGENVELIRSV 354
Query: 583 SGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQ 618
SGA + + + + RV +I GTP Q + A L+Q
Sbjct: 355 SGAVVVLEKIGNGQEVRV-MIEGTPSQVQTAHQLVQ 389
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 94/186 (50%), Gaps = 21/186 (11%)
Query: 38 IYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVD-PF-PGAKDRVVTIYSHVKDKED 95
++R++ P +G +IG+ G I + ETRARV+V+D P GA R+V V +E+
Sbjct: 99 VFRLVVPADKVGGIIGRRGDTIKRLCDETRARVRVLDAPHGDGAFSRIVL----VSAREE 154
Query: 96 VEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEE---CQILVPSSQSA 152
VE + L A +A +K+ I N + + + E ++LVP +Q+
Sbjct: 155 VEAE--------LSPAMNAAIKIFKHI-NEIEDINSDGTLMAPAPEISSVRLLVPFAQAL 205
Query: 153 NIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAIS 212
++IGK G TIK ++ T +++++ +D +H E V I+G S V AL +
Sbjct: 206 HVIGKQGVTIKSIQESTGSTVRIMDEDELL-SHETMGE--RIVEINGASLEVLNALKLVL 262
Query: 213 AIMYKF 218
++ KF
Sbjct: 263 GLLRKF 268
>gi|312079807|ref|XP_003142332.1| hypothetical protein LOAG_06748 [Loa loa]
gi|307762504|gb|EFO21738.1| hypothetical protein LOAG_06748 [Loa loa]
Length = 342
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 136/318 (42%), Gaps = 58/318 (18%)
Query: 329 TIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKINDEDDDT 388
IK +R A + V D++ E V+T+TA + ++I + E + L D+ D
Sbjct: 51 NIKRLRSEFDANLTVPDSQT--PERVLTLTA--TTENISNCLREIIPRLDENREDDHDRR 106
Query: 389 --------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCA-DANDEL 439
+++LV G +IG+ GS I E+R++T A +++ +CA + + +
Sbjct: 107 GKKADRPDSEMKVLVHESHAGAVIGRGGSRIKELREKTGAQLKVFS----RCAPQSTERI 162
Query: 440 VEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSGTGISMPPLLPSIPP 499
V + GEV + D + II L++ P+ + P
Sbjct: 163 VLLNGEVEKIIDCINIIIDVLKE----------------------------IPIKGPVRP 194
Query: 500 VGPLGYDQRADSGSG--------IGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKL----- 546
P+ YD S G I + YG+G + G YS
Sbjct: 195 YDPMYYDPDIISDYGGYVPDRNFISRVGRGRDYGFGGSVIPSRYPGRDDRYSGMRDMIGR 254
Query: 547 YGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGT 606
Y +P T +V +P G +IGK GS + +R+ SGA IE+ + + GDR+ ISGT
Sbjct: 255 YSPIPAMQTTQVTIPDELGGAIIGKGGSRINRVREESGAQIEVEPHRDNGGDRIITISGT 314
Query: 607 PEQKRAAENLIQAFIMAT 624
EQ +AA+ L+Q + +
Sbjct: 315 REQIQAAQYLLQQCVRTS 332
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 114/243 (46%), Gaps = 45/243 (18%)
Query: 131 DNDKKRKEKE----ECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHS 186
D+D++ K+ + E ++LV S + +IG+ G+ IK LR KT +KV + A + T
Sbjct: 102 DHDRRGKKADRPDSEMKVLVHESHAGAVIGRGGSRIKELREKTGAQLKVFSRCAPQST-- 159
Query: 187 CAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIY 246
+ VL++GE E + + I ++ ++IP++ VR P P + Y
Sbjct: 160 -----ERIVLLNGEVEKIIDCINIIIDVL------KEIPIKGPVRPYDPMYYDPDIISDY 208
Query: 247 PPGGLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTWPVYSTG----LSLVSGLVG- 301
GG P+ + I +RV + Y G+ P G S + ++G
Sbjct: 209 --GGYVPDRNFI------------SRVGRGRDYGFGGSVIPSRYPGRDDRYSGMRDMIGR 254
Query: 302 -----ASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVIT 356
A Q+ ++ I P G +IGKGG I +R+ SGAQI+V+ +DN + +IT
Sbjct: 255 YSPIPAMQTTQVTI----PDELGGAIIGKGGSRINRVREESGAQIEVEPHRDNGGDRIIT 310
Query: 357 VTA 359
++
Sbjct: 311 ISG 313
>gi|313226221|emb|CBY21364.1| unnamed protein product [Oikopleura dioica]
Length = 545
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 149/331 (45%), Gaps = 64/331 (19%)
Query: 300 VGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQA--SGAQIDVDDTKDNRDECVITV 357
GA S + +++L P + +G +IGKGG T++ I Q S A++DV + + V T+
Sbjct: 172 FGARGSPDTPLKMLVPASVVGAIIGKGGSTVRQITQLKDSRARVDVHRREGPGSDKVATI 231
Query: 358 TAIESPDDIKSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKR 417
+P+ + A+ +L+ +E D+ + +++L + +IG +IG+ G + ++ +
Sbjct: 232 YG--APE---ACGAAAIRILEIVRKEEKDNELPLKVLAHNALIGRLIGRDGRNLKHVQDK 286
Query: 418 TKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRD---DALKDRDGSRNP 474
T + IS + + D + + GEV + +A QI +LR D S P
Sbjct: 287 TGTRIAISSMHELSPYNM-DRTISIHGEVKGISEAEQQITEKLRQFETDMAAMSQQSLYP 345
Query: 475 PVGADHIYSSGTGISMPPLL--PSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMG 532
+ + + M P L P+ PP + Y
Sbjct: 346 GLNSQQ-------MQMFPGLQSPTAPPAYNVSYQ-------------------------- 372
Query: 533 DSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMS-- 590
G+ SS +++ T+ +L+P+ AVG +IG G+++ NI +I+GA+I +
Sbjct: 373 ----GNSSSNNTQ--------ETVTLLIPSGAVGAIIGSRGTHIRNISRIAGASIRIHAL 420
Query: 591 DSKSSRGDRVA----LISGTPEQKRAAENLI 617
+ +++ DR A I G PE + A+ I
Sbjct: 421 EGENADADRDAKARVTIVGVPESQWKAQFCI 451
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 89/402 (22%), Positives = 161/402 (40%), Gaps = 94/402 (23%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQ--ETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVE 97
++L P V+G++IGK G + I Q ++RARV V D+V TIY
Sbjct: 183 KMLVPASVVGAIIGKGGSTVRQITQLKDSRARVDVHRREGPGSDKVATIYG--------- 233
Query: 98 VDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEE----CQILVPSSQSAN 153
E AA +L++ RKE+++ ++L ++
Sbjct: 234 ------APEACGAAAIRILEI----------------VRKEEKDNELPLKVLAHNALIGR 271
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISA 213
+IG+ G +K ++ KT T I ++ P + D + I GE + + +A I+
Sbjct: 272 LIGRDGRNLKHVQDKTGTRIAISSMHELSPYN-----MDRTISIHGEVKGISEAEQQITE 326
Query: 214 IMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARV 273
+ +F ET + S +YP GL + P P+ A V
Sbjct: 327 KLRQF--------ET-------DMAAMSQQSLYP--GLNSQQMQMFPGLQSPTAPPAYNV 369
Query: 274 PDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSI 333
QG + + NT + + +L P +G +IG G I++I
Sbjct: 370 -SYQGNSSSNNT---------------------QETVTLLIPSGAVGAIIGSRGTHIRNI 407
Query: 334 RQASGAQIDVD----DTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKINDE----- 384
+ +GA I + + D + VT + P+ +A + K+ E
Sbjct: 408 SRIAGASIRIHALEGENADADRDAKARVTIVGVPES----QWKAQFCIFDKLKQEGWFGN 463
Query: 385 DDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISK 426
++ +T ++ + K++G IIGK G + E+++ T ++V I +
Sbjct: 464 EEGRLTTQITIPGKLVGRIIGKGGVNVRELQRITSSEVTIPR 505
>gi|28212254|ref|NP_783184.1| insulin-like growth factor 2 mRNA-binding protein 1 [Rattus
norvegicus]
gi|81866340|sp|Q8CGX0.1|IF2B1_RAT RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 1;
Short=IGF2 mRNA-binding protein 1; Short=IMP-1; AltName:
Full=B-actin zipcode-binding protein 1; Short=rZBP-1;
AltName: Full=IGF-II mRNA-binding protein 1; AltName:
Full=VICKZ family member 1
gi|27464838|gb|AAO16210.1| b-actin zipcode binding protein 1 [Rattus norvegicus]
gi|149053959|gb|EDM05776.1| insulin-like growth factor 2, binding protein 1 [Rattus norvegicus]
gi|171846741|gb|AAI61831.1| Insulin-like growth factor 2 mRNA binding protein 1 [Rattus
norvegicus]
Length = 577
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 148/332 (44%), Gaps = 47/332 (14%)
Query: 292 GLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRD 351
G + +G Q ++ +R+L P +G +IGK G TI++I + + ++IDV K+N
Sbjct: 180 GSPVAAGAPAKQQQVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDV-HRKENAG 238
Query: 352 ECVITVTAIESPDDIKSMAVEAVLLLQTKIND-EDDDTVTIRLLVSSKVIGCIIGKSGSI 410
++ +P+ S + ++ + D + D V +++L + +G +IGK G
Sbjct: 239 AAEKAISVHSTPEGCSSACKMILEIMHKEAKDTKTADEVPLKILAHNNFVGRLIGKEGRN 298
Query: 411 INEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDG 470
+ ++ + T+ + IS + + + V G + + A +I+ ++R+ D
Sbjct: 299 LKKVEQDTETKITISSLQDLTLYNP-ERTITVKGAIENCCRAEQEIMKKVREAYEND--- 354
Query: 471 SRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLS 530
V A + S L+P + + G+ SSS++ S
Sbjct: 355 -----VAAMSLQSH--------LIPGL-----------NLAAVGLFPASSSAVPPPPSSV 390
Query: 531 MGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATI--- 587
G +PYGS + P ++V +PA AVG +IGK G ++ + + + A+I
Sbjct: 391 TGAAPYGS--------FMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIA 442
Query: 588 --EMSDSKSSRGDRVALISGTPEQKRAAENLI 617
E DSK R+ +I+G PE + A+ I
Sbjct: 443 PPETPDSKV----RMVVITGPPEAQFKAQGRI 470
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 87/375 (23%), Positives = 156/375 (41%), Gaps = 74/375 (19%)
Query: 143 QILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKD---ASEP---THS--------CA 188
++LVP+ IIGK GATI+ + +T++ I V K+ A+E HS C
Sbjct: 199 RLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTPEGCSSACK 258
Query: 189 MEFDNFVLISGESEAVKKA------LFAISAIMYKFSPREDIPLETTVREAPPSIIIPS- 241
M + ++ E++ K A + A + + + +E L+ ++ I I S
Sbjct: 259 MILE---IMHKEAKDTKTADEVPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSL 315
Query: 242 -DVPIYPP-------GGL-----------------YPN--ADPILPSRSVPSILGAARVP 274
D+ +Y P G + Y N A L S +P L A V
Sbjct: 316 QDLTLYNPERTITVKGAIENCCRAEQEIMKKVREAYENDVAAMSLQSHLIPG-LNLAAVG 374
Query: 275 DLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIR 334
+ P TG + + A + E +++V P +G +IGK G IK +
Sbjct: 375 LFPASSSAVPPPPSSVTGAAPYGSFMQAPEQE--MVQVFIPAQAVGAIIGKKGQHIKQLS 432
Query: 335 QASGAQIDVD--DTKDNRDECVITVTAIESPDDIKSMA---VEAVLLLQTKINDEDDDTV 389
+ + A I + +T D++ V+ I P + + A + L + +++ +
Sbjct: 433 RFASASIKIAPPETPDSKVRMVV----ITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKL 488
Query: 390 TIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDE-LVEVVGEVGS 448
+ V + G +IGK G +NE++ T A+V + + P D ND+ +V+++G +
Sbjct: 489 ETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQTP---DENDQVIVKIIGHFYA 545
Query: 449 -------VRDALVQI 456
+RD L Q+
Sbjct: 546 SQMAQRKIRDILAQV 560
Score = 45.8 bits (107), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 95/248 (38%), Gaps = 67/248 (27%)
Query: 28 KDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKV---VDPFPGAKDRVV 84
KD K +E V +IL + +G +IGK G+ + + Q+T ++ + D +R +
Sbjct: 269 KDTKTADE-VPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYNPERTI 327
Query: 85 TIYSHVKDKEDVEVDDEFNDKEPLC-AAQDALLKVHAAIANAVANATDNDK--------- 134
T+ + E C A Q+ + KV A N VA +
Sbjct: 328 TVKGAI---------------ENCCRAEQEIMKKVREAYENDVAAMSLQSHLIPGLNLAA 372
Query: 135 ----------------------------KRKEKEECQILVPSSQSANIIGKAGATIKRLR 166
+ E+E Q+ +P+ IIGK G IK+L
Sbjct: 373 VGLFPASSSAVPPPPSSVTGAAPYGSFMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLS 432
Query: 167 SKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYK---FSPRED 223
SIK+ P + P M V+I+G EA KA I + + F P+E+
Sbjct: 433 RFASASIKIAPPET--PDSKVRM-----VVITGPPEAQFKAQGRIYGKLKEENFFGPKEE 485
Query: 224 IPLETTVR 231
+ LET +R
Sbjct: 486 VKLETHIR 493
Score = 43.1 bits (100), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 24/148 (16%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDP-FPGAKDRVVTIYSHVKDK 93
E + ++ P +G++IGK G+ I + + A +K+ P P +K R+V I
Sbjct: 404 EQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVVI------- 456
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
+A K I + K + K E I VP+S +
Sbjct: 457 ---------------TGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGR 501
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+IGK G T+ L++ T + V P+D +
Sbjct: 502 VIGKGGKTVNELQNLTAAEV-VVPRDQT 528
>gi|149641305|ref|XP_001512362.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
isoform 1 [Ornithorhynchus anatinus]
Length = 584
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/312 (21%), Positives = 141/312 (45%), Gaps = 40/312 (12%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSM 369
+R+L P +G +IGK G TI++I + + ++ID+ K+N +T +P+ +
Sbjct: 199 LRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDI-HRKENAGAAEKPITIHSTPEGCSTA 257
Query: 370 AVEAVLLLQTKINDED-DDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGD 428
+ ++Q + D + + +++L + +G +IGK G + +I + T + IS
Sbjct: 258 CKIIMEIMQKEAQDTKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQ 317
Query: 429 KPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSGTGI 488
+ + + V G + + A +I+ ++R+ D + A ++ +
Sbjct: 318 DLTLYNP-ERTITVKGSIETCAKAEEEIMKKIRESYEND--------IAAMNLQAH---- 364
Query: 489 SMPPLLP--SIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKL 546
L+P ++ +G +G+ S+++ Y P+G
Sbjct: 365 ----LIPGLNLNALGLFPPSSSGIPPPTVGVASAAAATSY-------PPFGQQ------- 406
Query: 547 YGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGD-RVALISG 605
P T+ + +PA AVG +IGK G ++ + + +GA+I+++ ++ RV +I+G
Sbjct: 407 ----PESETVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKLRVVIITG 462
Query: 606 TPEQKRAAENLI 617
PE + A+ I
Sbjct: 463 PPEAQFKAQGRI 474
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 88/406 (21%), Positives = 162/406 (39%), Gaps = 70/406 (17%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKEDVEV 98
R+L P +G++IGK G I +I ++T++++ + GA ++ +TI+S
Sbjct: 200 RMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAEKPITIHS---------- 249
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
E A ++++ A D K E+ +IL ++ +IGK
Sbjct: 250 -----TPEGCSTACKIIMEIMQKEAQ--------DTKFTEEIPLKILAHNNFVGRLIGKE 296
Query: 159 GATIKRLRSKTRTSIKVTP-KDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYK 217
G +K++ T T I ++P +D + + + + G E KA IM K
Sbjct: 297 GRNLKKIEQDTDTKITISPLQDLT------LYNPERTITVKGSIETCAKAE---EEIMKK 347
Query: 218 FSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQ 277
+RE+ + I ++ + GL NA + P S V
Sbjct: 348 ------------IRESYENDIAAMNLQAHLIPGLNLNALGLFPPSSSGIPPPTVGVAS-- 393
Query: 278 GYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQAS 337
A ++P + Q E + + P +G +IGK G IK + + +
Sbjct: 394 --AAAATSYPPF------------GQQPESETVHLFIPALAVGAIIGKQGQHIKQLSRFA 439
Query: 338 GAQIDVDDTKDNRDECVITVTAIESPDDIKSMA---VEAVLLLQTKINDEDDDTVTIRLL 394
GA I + + + + V I P + + A + L + +++ + +
Sbjct: 440 GASIKIAPAEG--PDAKLRVVIITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLEAHIK 497
Query: 395 VSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELV 440
V S G +IGK G +NE++ T A+V + + P D ND++V
Sbjct: 498 VPSYAAGRVIGKGGKTVNELQNLTSAEVVVPRDQTP---DENDQVV 540
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 58/148 (39%), Gaps = 24/148 (16%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPF-PGAKDRVVTIYSHVKDK 93
ES + P +G++IGK G+ I + + A +K+ P AK RVV I
Sbjct: 408 ESETVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKLRVVII------- 460
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
+A K I + K + K E I VPS +
Sbjct: 461 ---------------TGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLEAHIKVPSYAAGR 505
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+IGK G T+ L++ T + V P+D +
Sbjct: 506 VIGKGGKTVNELQNLTSAEV-VVPRDQT 532
>gi|345320820|ref|XP_001521752.2| PREDICTED: poly(rC)-binding protein 3-like [Ornithorhynchus
anatinus]
Length = 261
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 96/183 (52%), Gaps = 26/183 (14%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDD-- 365
L IR+L ++G +IGK G T+K +R+ SGA+I++ + N E ++T+T P D
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG---PTDAI 68
Query: 366 IKSMAVEAVLLLQTKINDEDDDT------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
K+ A+ A + IN + T VT+RL+V + G +IGK GS I EIR+ T
Sbjct: 69 FKAFAMIAYKFEEDIINSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 128
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGAD 479
A V+++ GD ++ + V + G DA++Q + ++ L+ +PP GA
Sbjct: 129 AQVQVA-GD--MLPNSTERAVTISG----TPDAIIQCVKQICVVMLE------SPPKGAT 175
Query: 480 HIY 482
Y
Sbjct: 176 IPY 178
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 88/201 (43%), Gaps = 42/201 (20%)
Query: 29 DEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYS 88
E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R+VTI
Sbjct: 6 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTI-- 61
Query: 89 HVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIA--------NAVANATDNDKKRKEKE 140
DA+ K A IA N+++N+T K
Sbjct: 62 --------------------TGPTDAIFKAFAMIAYKFEEDIINSMSNSTATSKP---PV 98
Query: 141 ECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGE 200
+++VP+SQ ++IGK G+ IK +R T ++V T + V ISG
Sbjct: 99 TLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNST-------ERAVTISGT 151
Query: 201 SEAVKKALFAISAIMYKFSPR 221
+A+ + + I +M + P+
Sbjct: 152 PDAIIQCVKQICVVMLESPPK 172
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+TIRLL+ K +G IIGK G + ++R+ + A + IS+G+ P + +V + G
Sbjct: 13 TLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCP------ERIVTITGPTD 66
Query: 448 SVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
++ A I + +D ++ + + PPV
Sbjct: 67 AIFKAFAMIAYKFEEDIINSMSNSTATSKPPV 98
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Query: 552 PPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMS-DSKSSRGDRVALISGTPE 608
PP+TL ++VPA+ G +IGK GS + IR+ +GA ++++ D + +R ISGTP+
Sbjct: 96 PPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPD 153
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 40/66 (60%), Gaps = 3/66 (4%)
Query: 302 ASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDV-DDTKDNRDECVITVTAI 360
A+ + +R++ P ++ G +IGKGG IK IR+++GAQ+ V D N E +T++
Sbjct: 92 ATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISG- 150
Query: 361 ESPDDI 366
+PD I
Sbjct: 151 -TPDAI 155
>gi|67969673|dbj|BAE01185.1| unnamed protein product [Macaca fascicularis]
Length = 324
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 146/311 (46%), Gaps = 38/311 (12%)
Query: 318 KIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVL-L 376
++G +IGK G ++K +R+ SGA+I++ + N E +IT+ P + A ++
Sbjct: 5 EVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLAG---PTNAIFKAFAMIIDK 59
Query: 377 LQTKINDEDDDT-------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDK 429
L+ I+ ++ VT+RL+V + G +IGK G I EIR+ T A V+++
Sbjct: 60 LEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 119
Query: 430 PKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSGTGIS 489
P ++ + + + G S+ + + QI + + + S++PP G Y
Sbjct: 120 P---NSTERAITIAGIPQSIIECVKQICVVMLETL------SQSPPKGVTIPYRPK---- 166
Query: 490 MPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGG 549
PS PV + +A + G + L L+M S + ++ + + G
Sbjct: 167 -----PSSSPV--IFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPM--THGNTGFSG 217
Query: 550 L---PPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGT 606
L + E+ +P + +G +IG+ G+ + IR++SGA I++++ DR I+G+
Sbjct: 218 LDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGS 277
Query: 607 PEQKRAAENLI 617
A+ LI
Sbjct: 278 AASISLAQYLI 288
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 141/324 (43%), Gaps = 67/324 (20%)
Query: 48 IGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEP 107
+GS+IGK G+ + +R+E+ AR+ + + +R++T
Sbjct: 6 VGSIIGKKGESVKKMREESGARINISEG--NCPERIIT---------------------- 41
Query: 108 LCAAQDALLKVHAAIANAV-----ANATDNDKKRKEKEECQILVPSSQSANIIGKAGATI 162
L +A+ K A I + + ++ T++ + +++VP+SQ ++IGK G I
Sbjct: 42 LAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKI 101
Query: 163 KRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPRE 222
K +R T ++V T + + I+G +++ + + I +M
Sbjct: 102 KEIRESTGAQVQVAGDMLPNST-------ERAITIAGIPQSIIECVKQICVVM------- 147
Query: 223 DIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADP-ILPSRSVPSILGAARVPD-----L 276
LET + P + IP Y P P++ P I +I G +P L
Sbjct: 148 ---LETLSQSPPKGVTIP-----YRP---KPSSSPVIFAGGQAYTIQGQYAIPQPDLTKL 196
Query: 277 QGYADTGNTWPVYSTGLSLVSGLVGASQ--SEELVIRVLCPFNKIGRVIGKGGGTIKSIR 334
A + +P+ + G + SGL ++Q S EL I P + IG +IG+ G I IR
Sbjct: 197 HQLAMQQSHFPM-THGNTGFSGLDASAQTTSHELTI----PNDLIGCIIGRQGAKINEIR 251
Query: 335 QASGAQIDVDDTKDNRDECVITVT 358
Q SGAQI + + + + +T+T
Sbjct: 252 QMSGAQIKIANPVEGSTDRQVTIT 275
Score = 46.6 bits (109), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 34/52 (65%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTI 86
++ + + P+ +IG +IG+ G IN IRQ + A++K+ +P G+ DR VTI
Sbjct: 223 QTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTI 274
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDV-DDTKDNRDECVITVTAIESPDDI 366
+ +R++ P ++ G +IGKGG IK IR+++GAQ+ V D N E IT+ I P I
Sbjct: 79 VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGI--PQSI 136
Query: 367 KSMAVEAVLLLQTKINDEDDDTVTI 391
+ +++ ++ VTI
Sbjct: 137 IECVKQICVVMLETLSQSPPKGVTI 161
Score = 39.3 bits (90), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 43/82 (52%), Gaps = 9/82 (10%)
Query: 398 KVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQII 457
K +G IIGK G + ++R+ + A + IS+G+ P + ++ + G ++ A II
Sbjct: 4 KEVGSIIGKKGESVKKMREESGARINISEGNCP------ERIITLAGPTNAIFKAFAMII 57
Query: 458 LRLRDD---ALKDRDGSRNPPV 476
+L +D ++ + + PPV
Sbjct: 58 DKLEEDISSSMTNSTAASRPPV 79
>gi|113931242|ref|NP_001039068.1| poly(rC) binding protein 2 [Xenopus (Silurana) tropicalis]
gi|89273953|emb|CAJ81328.1| poly(rC) binding protein 3 [Xenopus (Silurana) tropicalis]
Length = 362
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 111/235 (47%), Gaps = 7/235 (2%)
Query: 389 VTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGS 448
VT+RL+V + G +IGK GS I EIR+ T A V+++ GD ++ + V + G +
Sbjct: 12 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVA-GDM--LPNSTERAVTISGTPDA 68
Query: 449 VRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQR 508
+ + QI + + + K P + I +G + +L S L Q
Sbjct: 69 IIQCVKQICVVMLESPPKGATIPYRPKPASGPIIFAGGQVRAETILASAGNHTVLAQPQP 128
Query: 509 ADSGS--GIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYG--GLPPPLTLEVLVPANA 564
A + + G + L L+M +P+ + + G P + E+ +P +
Sbjct: 129 APAFAIQGQYAIPHPDLTKLHQLAMQHTPFTPLGQTTPGFPGLDATSPTSSHELTIPNDL 188
Query: 565 VGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQA 619
+G +IG+ GS + IR++SGA I+++++ G+R I+G+P A+ LI A
Sbjct: 189 IGCIIGRQGSKINEIRQMSGAQIKIANASEGNGERQVTITGSPANISLAQYLINA 243
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 107/262 (40%), Gaps = 54/262 (20%)
Query: 130 TDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAM 189
T++ K +++VP+SQ ++IGK G+ IK +R T ++V T
Sbjct: 2 TNSTVTSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNST----- 56
Query: 190 EFDNFVLISGESEAVKKALFAISAIMYKFSPR-EDIPLETTVREAPPSIIIPSDVPIYPP 248
+ V ISG +A+ + + I +M + P+ IP P+ PI
Sbjct: 57 --ERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPK----------PASGPIIFA 104
Query: 249 GGLYPNADPILPSRSVPSILG--------------AARVPDLQG----------YADTGN 284
GG A+ IL S ++L A PDL + G
Sbjct: 105 GGQV-RAETILASAGNHTVLAQPQPAPAFAIQGQYAIPHPDLTKLHQLAMQHTPFTPLGQ 163
Query: 285 TWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVD 344
T P + GL S + S EL I P + IG +IG+ G I IRQ SGAQI +
Sbjct: 164 TTPGFP-GLDATS----PTSSHELTI----PNDLIGCIIGRQGSKINEIRQMSGAQIKIA 214
Query: 345 DTKDNRDECVITVTAIESPDDI 366
+ + E +T+T SP +I
Sbjct: 215 NASEGNGERQVTITG--SPANI 234
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Query: 552 PPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMS-DSKSSRGDRVALISGTPE 608
PP+TL ++VPA+ G +IGK GS + IR+ +GA ++++ D + +R ISGTP+
Sbjct: 10 PPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPD 67
Score = 42.4 bits (98), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 6/95 (6%)
Query: 383 DEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDE-LVE 441
D T + L + + +IGCIIG+ GS INEIR+ + A ++I+ ++ N E V
Sbjct: 172 DATSPTSSHELTIPNDLIGCIIGRQGSKINEIRQMSGAQIKIANA-----SEGNGERQVT 226
Query: 442 VVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPV 476
+ G ++ A I L L + S PV
Sbjct: 227 ITGSPANISLAQYLINASLEMAKLSTQTASVTTPV 261
Score = 40.0 bits (92), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 37 VIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTI 86
V R++ P GS+IGK G I IR+ T A+V+V D P + +R VTI
Sbjct: 12 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTI 62
Score = 39.3 bits (90), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 30/48 (62%)
Query: 39 YRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTI 86
+ + P+ +IG +IG+ G IN IRQ + A++K+ + G +R VTI
Sbjct: 180 HELTIPNDLIGCIIGRQGSKINEIRQMSGAQIKIANASEGNGERQVTI 227
>gi|332215035|ref|XP_003256642.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 5 [Nomascus leucogenys]
Length = 577
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 148/324 (45%), Gaps = 46/324 (14%)
Query: 301 GASQSEEL--VIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
G SQ+ ++ +R+L P +G +IGK G TIK+I + + +++D+ K+N VT
Sbjct: 186 GTSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDI-HRKENSGAAEKPVT 244
Query: 359 AIESPDDIKSMAVEAVLLLQTKINDEDD--DTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
+P+ S A +L + K DE + + +++L + ++G +IGK G + +I
Sbjct: 245 IHATPEGT-SEACRMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEH 303
Query: 417 RTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPV 476
T + IS + + + V G V + A ++I+ +LR+ D
Sbjct: 304 ETGTKITISSLQDLSIYNP-ERTITVKGTVEACASAEIEIMKKLREAFENDM-------- 354
Query: 477 GADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPY 536
L +Q+A+ G+ LS+ ++ G LS+ P
Sbjct: 355 --------------------------LAVNQQANLIPGLN-LSALGIFSTG-LSVLSPPA 386
Query: 537 GSMSSYSSKLYG--GLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS 594
G + + Y P + + +P AVG +IGK G+++ + + +GA+I+++ ++
Sbjct: 387 GPRGAPPAAPYHPFAYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEG 446
Query: 595 -SRGDRVALISGTPEQKRAAENLI 617
+R+ +I+G PE + A+ I
Sbjct: 447 PDVSERMVIITGPPEAQFKAQGRI 470
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 152/370 (41%), Gaps = 68/370 (18%)
Query: 142 CQILVPSSQSANIIGKAGATIKRLRSKTRT-----------------SIKVTPKDASEPT 184
+ILVP+ IIGK G TIK + +T++ +I TP+ SE
Sbjct: 197 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTSE-- 254
Query: 185 HSCAMEFDNFVLISGESEAVKKA------LFAISAIMYKFSPREDIPLETTVREAPPSII 238
+C M + ++ E++ K A + A + ++ + +E L+ E I
Sbjct: 255 -ACRMILE---IMQKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKIT 310
Query: 239 IPS--DVPIYPPGGLYPNADPILPSRS----VPSILGAARVPDLQGYADTGNTWP----- 287
I S D+ IY P + S + L A D+ N P
Sbjct: 311 ISSLQDLSIYNPERTITVKGTVEACASAEIEIMKKLREAFENDMLAVNQQANLIPGLNLS 370
Query: 288 ---VYSTGLSLVSGLVGA------------SQSEELVIRVLCPFNKIGRVIGKGGGTIKS 332
++STGLS++S G + E+ ++ + P +G +IGK G IK
Sbjct: 371 ALGIFSTGLSVLSPPAGPRGAPPAAPYHPFAYPEQEIVNLFIPTQAVGAIIGKKGAHIKQ 430
Query: 333 IRQASGAQIDVDDTK--DNRDECVITVTAIESPDDIKSMA---VEAVLLLQTKINDEDDD 387
+ + +GA I + + D + VI I P + + A + L + N +++
Sbjct: 431 LARFAGASIKIAPAEGPDVSERMVI----ITGPPEAQFKAQGRIFGKLKEENFFNPKEEV 486
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDE-LVEVVGEV 446
+ + V S G +IGK G +NE++ T A+V + + P D N+E +V ++G
Sbjct: 487 KLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEVIVPRDQTP---DENEEVIVRIIGHF 543
Query: 447 GSVRDALVQI 456
+ + A +I
Sbjct: 544 FASQTAQRKI 553
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 98/235 (41%), Gaps = 37/235 (15%)
Query: 27 EKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKV---VDPFPGAKDRV 83
E DE E + +IL +G++G +IGK G+ + I ET ++ + D +R
Sbjct: 266 EADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERT 325
Query: 84 VTIYSHVKDKEDVEVD-----DEFNDKEPLCAAQDA-------------------LLKVH 119
+T+ V+ E++ E + + L Q A +L
Sbjct: 326 ITVKGTVEACASAEIEIMKKLREAFENDMLAVNQQANLIPGLNLSALGIFSTGLSVLSPP 385
Query: 120 AAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKD 179
A A A + E+E + +P+ IIGK GA IK+L SIK+ P +
Sbjct: 386 AGPRGAPPAAPYHPFAYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAE 445
Query: 180 ASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYK---FSPREDIPLETTVR 231
+ + + V+I+G EA KA I + + F+P+E++ LE +R
Sbjct: 446 GPDVS-------ERMVIITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIR 493
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 58/148 (39%), Gaps = 24/148 (16%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPF-PGAKDRVVTIYSHVKDK 93
E I + P +G++IGK G I + + A +K+ P +R+V I
Sbjct: 404 EQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII------- 456
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
+A K I + + K + K E I VPSS +
Sbjct: 457 ---------------TGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGR 501
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+IGK G T+ L++ T + + P+D +
Sbjct: 502 VIGKGGKTVNELQNLTSAEV-IVPRDQT 528
>gi|324518489|gb|ADY47116.1| Heterogeneous nuclear ribonucleoprotein K [Ascaris suum]
gi|324519835|gb|ADY47493.1| Heterogeneous nuclear ribonucleoprotein K, partial [Ascaris suum]
Length = 361
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 138/340 (40%), Gaps = 70/340 (20%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSM 369
+R+L P G VIGKGG +IK +R A + + D++ E ++T+ A D++
Sbjct: 40 LRLLVPSRGAGAVIGKGGESIKRLRAECDATLTIPDSQT--PERIVTIVA--EIDNVIRC 95
Query: 370 AVEAVLLLQ--TKINDEDDD-----TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADV 422
E + L K D DD+ +RLLV G IIG+ G I E+R+ T +
Sbjct: 96 VNEIIPRLDECLKTRDSDDEGSARGESELRLLVHQSHAGAIIGRGGYRIKELREETSTQL 155
Query: 423 RISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPP----VGA 478
++ C + + +++++G + ++ II L++ +K G P
Sbjct: 156 KVYSQC---CPQSTERVIQIIGVPEKIIACVILIINMLKEIPIK---GPSRPYESMFYDP 209
Query: 479 DHIYSSGTGISMPP----------------LLPSIPPVGPLGYDQRADSGSGIGMLSSSS 522
+ ++ G PP LP P P G G G+GM S
Sbjct: 210 NFVHEYG---GFPPDRNYRGMGPRGGMYGGGLPPRAPRFPYG-------GRGMGMGVSPF 259
Query: 523 LYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKI 582
M T +V +P G +IGK G + IR+
Sbjct: 260 PPAPFGGPM----------------------QTTQVTIPNELGGTIIGKGGERINRIREE 297
Query: 583 SGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFIM 622
SGA I + + + +R+ ISG+ Q + A+ L+Q +I+
Sbjct: 298 SGAHI-VVEPQQPNSERIITISGSHAQIQTAQYLLQQWIV 336
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 130/332 (39%), Gaps = 65/332 (19%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVD 99
R+L P G+VIGK G+ I +R E A + + D +R+VTI + E+D
Sbjct: 41 RLLVPSRGAGAVIGKGGESIKRLRAECDATLTIPDS--QTPERIVTIVA--------EID 90
Query: 100 DEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAG 159
+ + D LK +D++ + + E ++LV S + IIG+ G
Sbjct: 91 NVIRCVNEIIPRLDECLKT---------RDSDDEGSARGESELRLLVHQSHAGAIIGRGG 141
Query: 160 ATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFS 219
IK LR +T T +KV + C + + I G E + + I ++
Sbjct: 142 YRIKELREETSTQLKVY-------SQCCPQSTERVIQIIGVPEKIIACVILIINML---- 190
Query: 220 PREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNAD------------PILPSRSVPSI 267
++IP++ R P+ V Y GG P+ + LP R
Sbjct: 191 --KEIPIKGPSRPYESMFYDPNFVHEY--GGFPPDRNYRGMGPRGGMYGGGLPPR----- 241
Query: 268 LGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGG 327
A R P Y G G+ + +V P G +IGKGG
Sbjct: 242 --APRFP----YGGRG-------MGMGVSPFPPAPFGGPMQTTQVTIPNELGGTIIGKGG 288
Query: 328 GTIKSIRQASGAQIDVDDTKDNRDECVITVTA 359
I IR+ SGA I V+ + N E +IT++
Sbjct: 289 ERINRIREESGAHIVVEPQQPN-SERIITISG 319
>gi|46125203|ref|XP_387155.1| hypothetical protein FG06979.1 [Gibberella zeae PH-1]
Length = 372
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 91/340 (26%), Positives = 146/340 (42%), Gaps = 60/340 (17%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
+L +R + + G +IGKGG + +R +G + V + V+T+T D I
Sbjct: 46 QLTLRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTITG--GCDAI 103
Query: 367 -KSMAVEAVLLLQTKIND------EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
++ A+ A LL+ + + T I+LL+S +G IIG+ G I I+ +
Sbjct: 104 SRAYAIVARALLEGAPAMGMGGVVQSNGTHPIKLLISHNQMGTIIGRQGLKIKHIQDASG 163
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGAD 479
+ K P+ + + +VEV G ++ A+ +I L DD
Sbjct: 164 VRMVAQKEMLPQ---STERIVEVQGTPEGIQRAIWEICKCLVDD---------------- 204
Query: 480 HIYSSGTGISM-PPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGS---------- 528
+ GTG + P++ + P G G+G S S YG GS
Sbjct: 205 --WQRGTGTVLYNPVVRTQPSSGG-----NTSGGAGFNQGSGRSDYG-GSPRVMRTGNGA 256
Query: 529 -LSMGDS-PYGSMSSYSSKLYGGLPPPL--------TLEVLVPANAVGKVIGKAGSNLAN 578
S G S PY S + L G PP T + +PA+ VG +IG+AGS ++
Sbjct: 257 DFSNGSSRPYNRRSDSDAALRG--PPTHDENGEEIQTQNISIPADMVGCIIGRAGSKISE 314
Query: 579 IRKISGATIEMSDS-KSSRGDRVALISGTPEQKRAAENLI 617
IRK SGA I ++ + G+R+ I GT + +A L+
Sbjct: 315 IRKTSGARISIAKAPHDETGERMFTIMGTAKANESALFLL 354
Score = 39.7 bits (91), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 77/376 (20%), Positives = 142/376 (37%), Gaps = 61/376 (16%)
Query: 29 DEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYS 88
+E+ + + R + G +IGK GK + +R ET + V G DRV+TI
Sbjct: 39 EEEYAQAQLTLRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTI-- 96
Query: 89 HVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAV-----ANATDNDKKRKEKEECQ 143
DA+ + +A +A A+ A + +
Sbjct: 97 --------------------TGGCDAISRAYAIVARALLEGAPAMGMGGVVQSNGTHPIK 136
Query: 144 ILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEA 203
+L+ +Q IIG+ G IK ++ + +++ + P + + V + G E
Sbjct: 137 LLISHNQMGTIIGRQGLKIKHIQDA--SGVRMVAQKEMLPQST-----ERIVEVQGTPEG 189
Query: 204 VKKALFAISAIMYKFSPR--EDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPS 261
+++A++ I + R + VR P S GG
Sbjct: 190 IQRAIWEICKCLVDDWQRGTGTVLYNPVVRTQPSS------------GGNTSGGAGFNQG 237
Query: 262 RSVPSILGAARVPDLQGYAD--TGNTWPVYSTGLSLVSGLVGA----SQSEELVIR-VLC 314
G+ RV AD G++ P Y+ + L G EE+ + +
Sbjct: 238 SGRSDYGGSPRVMRTGNGADFSNGSSRP-YNRRSDSDAALRGPPTHDENGEEIQTQNISI 296
Query: 315 PFNKIGRVIGKGGGTIKSIRQASGAQIDV-----DDTKDNRDECVITVTAIESPDDIKSM 369
P + +G +IG+ G I IR+ SGA+I + D+T + + T A ES +
Sbjct: 297 PADMVGCIIGRAGSKISEIRKTSGARISIAKAPHDETGERMFTIMGTAKANESALFLLYE 356
Query: 370 AVEAVLLLQTKINDED 385
+EA + ++++ + +
Sbjct: 357 NLEAEKMRRSQLQETE 372
>gi|326500580|dbj|BAK06379.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 471
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 91/183 (49%), Gaps = 17/183 (9%)
Query: 38 IYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVE 97
++R++ +G +IG+ G+VI + + TRARV+V+DP G R+V I + E+ +
Sbjct: 95 VFRLVVAGDKVGGLIGRRGEVIKRLCEVTRARVRVLDPTDGVSSRIVLISA----TEETQ 150
Query: 98 VDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEEC--QILVPSSQSANII 155
+ L A DA +++ + + D E C ++LVP +Q ++I
Sbjct: 151 AE--------LAPAMDAAVRIFKHVNDIEGINPDFTLPVSGPEICSARLLVPKAQGRHLI 202
Query: 156 GKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIM 215
GK G TI+ ++ T T+I++ KD S M + V I G S V AL ++ ++
Sbjct: 203 GKQGTTIQLMQESTGTTIRIIDKDE---LLSNQMVEERIVEIRGASLKVLNALKSVLGLL 259
Query: 216 YKF 218
+F
Sbjct: 260 RRF 262
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 85/342 (24%), Positives = 150/342 (43%), Gaps = 32/342 (9%)
Query: 298 GLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITV 357
G GAS V R++ +K+G +IG+ G IK + + + A++ V D D ++ +
Sbjct: 89 GFPGAS-----VFRLVVAGDKVGGLIGRRGEVIKRLCEVTRARVRVLDPTDGVSSRIVLI 143
Query: 358 TAIESPDDIKSMAVEAVLLLQTKINDED----DDTVTI--------RLLVSSKVIGCIIG 405
+A E + A++A + + +ND + D T+ + RLLV +IG
Sbjct: 144 SATEETQAELAPAMDAAVRIFKHVNDIEGINPDFTLPVSGPEICSARLLVPKAQGRHLIG 203
Query: 406 KSGSIINEIRKRTKADVRISKGDKPKCADANDE-LVEVVGEVGSVRDALVQI--ILR--L 460
K G+ I +++ T +RI D+ +E +VE+ G V +AL + +LR L
Sbjct: 204 KQGTTIQLMQESTGTTIRIIDKDELLSNQMVEERIVEIRGASLKVLNALKSVLGLLRRFL 263
Query: 461 RDDALKDRDGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSS 520
D ++ +N V S ++ L + L D R+ G S
Sbjct: 264 VDHSVLHLFERKNEEVAEVQNSSKENQVTNDYAL--VVNQDLLLSDSRSHHNPNGGRYLS 321
Query: 521 SSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIR 580
YG+ S+ D PY S + L +T + +P ++IG G +A+IR
Sbjct: 322 ---YGHDP-SVCD-PY---SRDIRRPTVSLISKITQTMRIPLPQAEEIIGVRGQTIAHIR 373
Query: 581 KISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFIM 622
+SGA + + ++ + + + I GT Q + A LIQ ++
Sbjct: 374 SVSGAMVVLEETGNYLDEVLVSIEGTSSQVQTAHQLIQEVLL 415
>gi|148229563|ref|NP_001079932.1| insulin-like growth factor 2 mRNA-binding protein 3-B [Xenopus
laevis]
gi|82227771|sp|O57526.1|IF23B_XENLA RecName: Full=Insulin-like growth factor 2 mRNA-binding protein
3-B; Short=IGF2 mRNA-binding protein 3-B; Short=IMP-3-B;
AltName: Full=69 kDa RNA-binding protein B; AltName:
Full=B3.65 protein B; AltName: Full=IGF-II mRNA-binding
protein 3-B; AltName: Full=KH domain-containing
transcription factor B3-B; AltName: Full=RNA-binding
protein Vera-B; AltName: Full=Trans-acting factor B3-B;
AltName: Full=VICKZ family member 3-B; AltName:
Full=VLE-binding protein B; AltName: Full=Vg1
RNA-binding protein B; Short=Vg1 RBP-B; AltName:
Full=Vg1 localization element binding protein B;
AltName: Full=VgLE-binding and ER association protein B
gi|2801766|gb|AAB97457.1| KH domain-containing transcription factor B3 [Xenopus laevis]
gi|3172447|gb|AAC18597.1| Vg1 RNA binding protein variant A [Xenopus laevis]
gi|35505483|gb|AAH57700.1| MGC68429 protein [Xenopus laevis]
Length = 593
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/313 (21%), Positives = 144/313 (46%), Gaps = 36/313 (11%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
E+ +R+L P +G +IGK G TI++I + + ++ID+ K+N +T +P+
Sbjct: 204 EVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHR-KENAGAAEKPITIHSTPEGC 262
Query: 367 KSMAVEAVLLLQTKINDED-DDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRIS 425
+ + ++Q + D + + +++L + +G +IGK G + +I + T + IS
Sbjct: 263 SAACKIIMEIMQKEAQDTKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITIS 322
Query: 426 KGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSG 485
+ + + V G + + A +++ ++R+ D + A ++ +
Sbjct: 323 PLQDLTLYNP-ERTITVKGSIETCAKAEEEVMKKIRESYEND--------IAAMNLQAH- 372
Query: 486 TGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSK 545
L+P + + + +G+ SS + SP +S S
Sbjct: 373 -------LIPGL-------------NLNALGLFPPSSSGMPPPSAGVSSP---TTSASYP 409
Query: 546 LYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGD-RVALIS 604
+G P T+ + +PA AVG +IGK G ++ + + +GA+I+++ ++ R+ +I+
Sbjct: 410 PFGQQPESETVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKLRMVIIT 469
Query: 605 GTPEQKRAAENLI 617
G PE + A+ I
Sbjct: 470 GPPEAQFKAQGRI 482
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 91/416 (21%), Positives = 167/416 (40%), Gaps = 78/416 (18%)
Query: 34 EESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKD 92
+ V R+L P +G++IGK G I +I ++T++++ + GA ++ +TI+S
Sbjct: 202 QSEVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAEKPITIHS---- 257
Query: 93 KEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSA 152
E AA ++++ A D K E+ +IL ++
Sbjct: 258 -----------TPEGCSAACKIIMEIMQKEAQ--------DTKFTEEIPLKILAHNNFVG 298
Query: 153 NIIGKAGATIKRLRSKTRTSIKVTP-KDAS--EPTHSCAMEFDNFVLISGESEAVKKALF 209
+IGK G +K++ T T I ++P +D + P + ++ E E +KK
Sbjct: 299 RLIGKEGRNLKKIEQDTDTKITISPLQDLTLYNPERTITVKGSIETCAKAEEEVMKK--- 355
Query: 210 AISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILG 269
+RE+ + I ++ + GL NA + P S
Sbjct: 356 --------------------IRESYENDIAAMNLQAHLIPGLNLNALGLFPPSSSGMPPP 395
Query: 270 AARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGT 329
+A V T ++P + Q E + + P +G +IGK G
Sbjct: 396 SAGVSS----PTTSASYPPF------------GQQPESETVHLFIPALAVGAIIGKQGQH 439
Query: 330 IKSIRQASGAQIDVDDTK--DNRDECVITVTAIESPDDIKSMA---VEAVLLLQTKINDE 384
IK + + +GA I + + D + VI I P + + A + L + +
Sbjct: 440 IKQLSRFAGASIKIAPAEGPDAKLRMVI----ITGPPEAQFKAQGRIYGKLKEENFFGPK 495
Query: 385 DDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELV 440
++ + + V S G +IGK G +NE++ T A+V + + P D ND++V
Sbjct: 496 EEVKLEAHIKVPSYAAGRVIGKGGKTVNELQNLTSAEVVVPRDQTP---DENDQVV 548
>gi|359486525|ref|XP_002264331.2| PREDICTED: RNA-binding protein Nova-1-like [Vitis vinifera]
Length = 309
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 126/318 (39%), Gaps = 78/318 (24%)
Query: 34 EESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV---DPFPGAKDRVVTIYSHV 90
E+S R L + GSVIGK G IN + ++ AR+++ + FPG DR++ I
Sbjct: 31 EKSTYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTSDRIIMISGAT 90
Query: 91 KDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQ 150
E + A + L K+ + + T++ + + + +++VP+S
Sbjct: 91 N--------------EIIKAMELILAKLLSEMH------TEDGDEADPRSKVRLIVPNSS 130
Query: 151 SANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFA 210
IIGK G+TIK ++ SIK++P+D ++ D V + G ++++ + A
Sbjct: 131 CGGIIGKGGSTIKSFIEDSQASIKISPQD-----NNYLGLTDRLVTLMG---SLEEQMRA 182
Query: 211 ISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGA 270
I I+ K + ED P T AP S + Y P G RS +G
Sbjct: 183 IDLILSKLT--ED-PHYTQFMNAPFSYAAAYNSMNYGPNGAGGKFQNNKEDRSNSVTIGV 239
Query: 271 ARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTI 330
A IG V+G+GG I
Sbjct: 240 AD--------------------------------------------EHIGLVVGRGGRNI 255
Query: 331 KSIRQASGAQIDVDDTKD 348
I QASGA+I + D D
Sbjct: 256 MDISQASGARIKISDRGD 273
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 75/161 (46%), Gaps = 10/161 (6%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD----NRDECVITVTAIESPDD 365
IR L G VIGKGG TI + SGA+I + + D ++ A +
Sbjct: 36 IRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTSDRIIMISGATN--EI 93
Query: 366 IKSMAVEAVLLL---QTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADV 422
IK+M + LL T+ DE D +RL+V + G IIGK GS I + ++A +
Sbjct: 94 IKAMELILAKLLSEMHTEDGDEADPRSKVRLIVPNSSCGGIIGKGGSTIKSFIEDSQASI 153
Query: 423 RISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDD 463
+IS D D LV ++G + A+ I+ +L +D
Sbjct: 154 KISPQDNNYLG-LTDRLVTLMGSLEEQMRAIDLILSKLTED 193
Score = 40.0 bits (92), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 48/94 (51%), Gaps = 2/94 (2%)
Query: 382 NDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVE 441
+D + + IR LVS+ G +IGK GS IN+ + ++ A +++S+ + +D ++
Sbjct: 27 SDFMEKSTYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSR-NHEFFPGTSDRIIM 85
Query: 442 VVGEVGSVRDALVQIILRLRDDALKDRDGSRNPP 475
+ G + A+ I+ +L + + DG P
Sbjct: 86 ISGATNEIIKAMELILAKLLSE-MHTEDGDEADP 118
>gi|388582172|gb|EIM22478.1| eukaryotic type KH-domain (KH-domain type I) [Wallemia sebi CBS
633.66]
Length = 319
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 145/323 (44%), Gaps = 51/323 (15%)
Query: 302 ASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIE 361
A + + L +R L + G +IGKGG + +R+ +G + V E V+++T
Sbjct: 15 ADEIDTLTLRALVSTKEAGIIIGKGGKNVADLRERTGVKAGVSKVIAGVHERVLSITGST 74
Query: 362 SPDDIKSMAVEAVLLLQTKINDED-------DDTVTIRLLVSSKVIGCIIGKSGSIINEI 414
S + ++ A +L +N T IRLL+S ++G +IG+ G I +I
Sbjct: 75 SAIA-DAFSIIAQTILDNPLNPSTAPLQSPPSATTAIRLLISHNLMGTVIGRQGIKIKQI 133
Query: 415 RKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNP 474
+ + + SK P+ + + +VEV G V S+ A+ I L +D DR
Sbjct: 134 QDTSGVRMVASKELLPQ---STERIVEVQGTVESIHIAINDIAKCLLEDW--DR------ 182
Query: 475 PVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDS 534
SGT + P PP ++ + S ++SS+ S+ D+
Sbjct: 183 --------YSGTILYTPA-----PP------NEHSLFNSS---FNNSSIRSINSVRRPDN 220
Query: 535 PYGSMSSYSSKLYGGLPPP---LTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSD 591
+M S +S LP P T + +P++ VG +IG+AGS ++ IR++S A I ++
Sbjct: 221 --FNMQSLNS----ALPQPRDVRTQHISIPSDMVGPIIGRAGSRISEIRRLSTAKIIIAK 274
Query: 592 S-KSSRGDRVALISGTPEQKRAA 613
G+R+ I GTPE A
Sbjct: 275 QPHDETGERLFTIIGTPEANEKA 297
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Query: 382 NDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVE 441
N ++ DT+T+R LVS+K G IIGK G + ++R+RT +SK A ++ ++
Sbjct: 14 NADEIDTLTLRALVSTKEAGIIIGKGGKNVADLRERTGVKAGVSK----VIAGVHERVLS 69
Query: 442 VVGEVGSVRDALVQIILRLRDDAL 465
+ G ++ DA I + D+ L
Sbjct: 70 ITGSTSAIADAFSIIAQTILDNPL 93
>gi|413935391|gb|AFW69942.1| hypothetical protein ZEAMMB73_108333 [Zea mays]
Length = 468
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 145/336 (43%), Gaps = 53/336 (15%)
Query: 298 GLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTK--DNRDECVI 355
G GAS V R++ P +K+G +IG+ G TIK + + A++ V D D ++
Sbjct: 93 GWPGAS-----VFRLVVPADKVGGIIGRRGDTIKRLCDETRARVRVLDAPHGDGAFSRIV 147
Query: 356 TVTAIESPDDIKSMAVEAVLLLQTKINDEDD------------DTVTIRLLVSSKVIGCI 403
V+A E + S A+ A + + IN+ +D + ++RLLV +
Sbjct: 148 LVSAREEVEAELSPAMNAAIKIFKHINEIEDINSDGTLMAPAPEISSVRLLVPFAQALHV 207
Query: 404 IGKSGSIINEIRKRTKADVRISKGDKPKCADANDE-LVEVVGEVGSVRDALVQIILRLRD 462
IGK G I I++ T + VRI D+ + E +VE+ G V +AL +++L L
Sbjct: 208 IGKQGVTIKSIQESTGSTVRIMDEDELLSHETMGERIVEINGASLEVLNAL-KLVLGLLR 266
Query: 463 DALKDRDGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSS 522
L D G H++ P + G+ G S
Sbjct: 267 KFLVDH--------GVLHLFERKN---------------PEVAQPQQSRGNPKG-----S 298
Query: 523 LYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKI 582
+ YG +PY S S+ L +T + +P VG++IG G N+ IR +
Sbjct: 299 RFLYGHDPSFHAPY---SRDLSQPADSLITKITRTMQIPLADVGEIIGVRGENVELIRSV 355
Query: 583 SGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQ 618
SGA + + + + RV +I GTP Q + A L+Q
Sbjct: 356 SGAVVVLEKIGNGQEVRV-MIEGTPSQVQTAHQLVQ 390
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 94/186 (50%), Gaps = 21/186 (11%)
Query: 38 IYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVD-PF-PGAKDRVVTIYSHVKDKED 95
++R++ P +G +IG+ G I + ETRARV+V+D P GA R+V V +E+
Sbjct: 99 VFRLVVPADKVGGIIGRRGDTIKRLCDETRARVRVLDAPHGDGAFSRIVL----VSAREE 154
Query: 96 VEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEE---CQILVPSSQSA 152
VE + L A +A +K+ I N + + + E ++LVP +Q+
Sbjct: 155 VEAE--------LSPAMNAAIKIFKHI-NEIEDINSDGTLMAPAPEISSVRLLVPFAQAL 205
Query: 153 NIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAIS 212
++IGK G TIK ++ T +++++ +D +H E V I+G S V AL +
Sbjct: 206 HVIGKQGVTIKSIQESTGSTVRIMDEDELL-SHETMGE--RIVEINGASLEVLNALKLVL 262
Query: 213 AIMYKF 218
++ KF
Sbjct: 263 GLLRKF 268
>gi|348519763|ref|XP_003447399.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 4 [Oreochromis niloticus]
Length = 584
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 142/324 (43%), Gaps = 53/324 (16%)
Query: 304 QSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESP 363
+ + +R+L P +G +IGK G TIK + + + +++D+ K+N +T +P
Sbjct: 195 RQHDFPLRMLVPTQFVGAIIGKEGNTIKDVTKQTQSKVDI-HRKENAGAAEKPITIHSTP 253
Query: 364 DDIKSMAVEAVLLLQTKINDEDDDT--VTIRLLVSSKVIGCIIGKSGSIINEIRKRTKAD 421
+ S A +L + K +E T + +++L + ++G +IGK G + +I + T
Sbjct: 254 EGC-SAACRMILDIMQKEANETKTTEDIPLKILAHNSLVGRLIGKEGRNLKKIEEDTGTK 312
Query: 422 VRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLR-----DDALKDRDGSRNP-- 474
+ IS + + + V G + + A V+I +LR D A ++ + P
Sbjct: 313 ITISSLQDLTIYNP-ERTITVKGSIDACCKAEVEITKKLREAYENDIAAINQQANLIPGL 371
Query: 475 PVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDS 534
+ A I+SSG LP +PP
Sbjct: 372 NLNALGIFSSG--------LPVLPPAA--------------------------------G 391
Query: 535 PYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS 594
P + S ++ P + + +P AVG +IGK G ++ + +GA+I+++ ++S
Sbjct: 392 PPTRIPPSSPEMSQSAPEQEVVYLFIPTQAVGALIGKKGQHIKQLAHFAGASIKIAPAES 451
Query: 595 -SRGDRVALISGTPEQKRAAENLI 617
+R+ +I+GTPE + A+ I
Sbjct: 452 PDVTERMVIITGTPEAQFKAQGRI 475
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 104/462 (22%), Positives = 177/462 (38%), Gaps = 109/462 (23%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKEDVEV 98
R+L P +G++IGK G I + ++T+++V + GA ++ +TI+S
Sbjct: 202 RMLVPTQFVGAIIGKEGNTIKDVTKQTQSKVDIHRKENAGAAEKPITIHS---------- 251
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
E AA +L + AN + K E +IL +S +IGK
Sbjct: 252 -----TPEGCSAACRMILDIMQKEAN--------ETKTTEDIPLKILAHNSLVGRLIGKE 298
Query: 159 GATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKF 218
G +K++ T T I + S + + + G +A KA I+ + +
Sbjct: 299 GRNLKKIEEDTGTKITI-----SSLQDLTIYNPERTITVKGSIDACCKAEVEITKKLRE- 352
Query: 219 SPREDIPLETTVREAPPSI------IIPSDVPIYPPGGLYPNADPILPSRSVPSILGAAR 272
+ DI P + I S +P+ PP A P P+R PS
Sbjct: 353 AYENDIAAINQQANLIPGLNLNALGIFSSGLPVLPPA-----AGP--PTRIPPS------ 399
Query: 273 VPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKS 332
S + S E+ V+ + P +G +IGK G IK
Sbjct: 400 ------------------------SPEMSQSAPEQEVVYLFIPTQAVGALIGKKGQHIKQ 435
Query: 333 IRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAV-----EAVLLLQTKI------ 381
+ +GA I + ESPD + M + EA Q +I
Sbjct: 436 LAHFAGASIKI--------------APAESPDVTERMVIITGTPEAQFKAQGRIFGKLKE 481
Query: 382 ----NDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADAND 437
+ +++ + + V S G +IGK G +NE++ T A+V + + P D ND
Sbjct: 482 ENFFSAKEEVKLETHIKVPSSAAGRVIGKGGKTVNELQNLTSAEVIVPRDQTP---DEND 538
Query: 438 E-LVEVVGEVGSVRDA---LVQIILRLRDDALKDRDGSRNPP 475
E V++ G + + A + +II +++ K + G+ P
Sbjct: 539 EVFVKISGHFFASQTAQRKIREIIQQVKQQEQKHQQGAAVSP 580
Score = 46.2 bits (108), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 78/198 (39%), Gaps = 30/198 (15%)
Query: 27 EKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDP-FPGAKDRVVT 85
E + E+ V+Y + P +G++IGK G+ I + A +K+ P +R+V
Sbjct: 402 EMSQSAPEQEVVY-LFIPTQAVGALIGKKGQHIKQLAHFAGASIKIAPAESPDVTERMVI 460
Query: 86 IYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQIL 145
I +A K I + K + K E I
Sbjct: 461 I----------------------TGTPEAQFKAQGRIFGKLKEENFFSAKEEVKLETHIK 498
Query: 146 VPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVK 205
VPSS + +IGK G T+ L++ T + + P+D + + + FV ISG A +
Sbjct: 499 VPSSAAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPDEND-----EVFVKISGHFFASQ 552
Query: 206 KALFAISAIMYKFSPRED 223
A I I+ + +E
Sbjct: 553 TAQRKIREIIQQVKQQEQ 570
>gi|19075184|ref|NP_587684.1| RNA-binding protein [Schizosaccharomyces pombe 972h-]
gi|74626925|sp|O74919.1|RNC1_SCHPO RecName: Full=RNA-binding protein rnc1; AltName: Full=RNA-binding
protein that suppresses calcineurin deletion 1
gi|3702642|emb|CAA21234.1| RNA-binding protein that suppresses calcineurin deletion Rnc1
[Schizosaccharomyces pombe]
Length = 398
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 145/332 (43%), Gaps = 56/332 (16%)
Query: 305 SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPD 364
+++L +R L + G +IGK G + +R + + V N + V+T++ P
Sbjct: 91 TQQLTLRALLSTREAGIIIGKAGKNVAELRSTTNVKAGVTKAVPNVHDRVLTISG---PL 147
Query: 365 DIKSMAVEAVLLLQTKINDEDDDTVT-------IRLLVSSKVIGCIIGKSGSIINEIRKR 417
+ A ++ + K + D T + +RLL++ ++G IIG++G I I+ +
Sbjct: 148 ENVVRAYRFIIDIFAKNSTNPDGTPSDANTPRKLRLLIAHSLMGSIIGRNGLRIKLIQDK 207
Query: 418 TKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVG 477
+ SK P+ + + VE+ G V ++ A+ +I L DD + G
Sbjct: 208 CSCRMIASKDMLPQ---STERTVEIHGTVDNLHAAIWEIGKCLIDDWER----------G 254
Query: 478 ADHI-YSSGTGISMPPLLPSI----------PPVGPLGYDQRADSGSGIGMLSSSSLYGY 526
A + Y+ + ++ P LPS+ PP P + SG + + YG
Sbjct: 255 AGTVFYNPVSRLTQP--LPSLASTASPQQVSPPAAP-------STTSGEAIPENFVSYGA 305
Query: 527 GSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGAT 586
P+ P +T + +PA+ VG +IG+ GS ++ IR+ SG+
Sbjct: 306 QVFPATQMPFLQQ------------PKVTQNISIPADMVGCIIGRGGSKISEIRRTSGSK 353
Query: 587 IEMS-DSKSSRGDRVALISGTPEQKRAAENLI 617
I ++ + G+R+ I+GT E+ A L+
Sbjct: 354 ISIAKEPHDETGERMFTITGTHEENEKALFLL 385
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 77/366 (21%), Positives = 134/366 (36%), Gaps = 77/366 (21%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKE 94
+ + R L G +IGK+GK + +R T + V P DRV+TI +++
Sbjct: 92 QQLTLRALLSTREAGIIIGKAGKNVAELRSTTNVKAGVTKAVPNVHDRVLTISGPLEN-- 149
Query: 95 DVEVDDEFNDKEPLCAAQDALLKVHAAIA-NAVANATDNDKKRKEKEECQILVPSSQSAN 153
+ A ++ + A + N +D + RK ++L+ S +
Sbjct: 150 -------------VVRAYRFIIDIFAKNSTNPDGTPSDANTPRK----LRLLIAHSLMGS 192
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAI-- 211
IIG+ G IK ++ K + + KD + V I G + + A++ I
Sbjct: 193 IIGRNGLRIKLIQDKCSCRM-IASKDM------LPQSTERTVEIHGTVDNLHAAIWEIGK 245
Query: 212 ----------SAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPS 261
+ Y R PL + A P + P P G P +
Sbjct: 246 CLIDDWERGAGTVFYNPVSRLTQPLPSLASTASPQQVSPPAAPSTTSGEAIPENFVSYGA 305
Query: 262 RSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGR 321
+ P A ++P LQ T N + P + +G
Sbjct: 306 QVFP----ATQMPFLQQPKVTQN---------------------------ISIPADMVGC 334
Query: 322 VIGKGGGTIKSIRQASGAQIDV-DDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTK 380
+IG+GG I IR+ SG++I + + D E + T+T ++ +A+ LL +
Sbjct: 335 IIGRGGSKISEIRRTSGSKISIAKEPHDETGERMFTITGTHEENE------KALFLLYQQ 388
Query: 381 INDEDD 386
+ E D
Sbjct: 389 LEMEKD 394
>gi|449277028|gb|EMC85335.1| Insulin-like growth factor 2 mRNA-binding protein 1, partial
[Columba livia]
Length = 519
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 149/333 (44%), Gaps = 50/333 (15%)
Query: 292 GLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRD 351
G + +G Q ++ +R+L P +G +IGK G TI++I + + ++IDV K+N
Sbjct: 124 GSPVTAGAPAKQQPVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHR-KENAG 182
Query: 352 ECVITVTAIESPDDIKSMAVEAVLLLQTKIND-EDDDTVTIRLLVSSKVIGCIIGKSGSI 410
++ +P+ + + ++Q + D + D V +++L + +G +IGK G
Sbjct: 183 AAEKAISIHSTPEGCSAACKMILEIMQKEAKDTKTADEVPLKILAHNNFVGRLIGKEGRN 242
Query: 411 INEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDG 470
+ ++ + T+ + IS + + + V G + + A +I+ ++R+ D
Sbjct: 243 LKKVEQDTETKITISSLQDLTLYNP-ERTITVKGSIENCCRAEQEIMKKVREAYEND--- 298
Query: 471 SRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLS 530
V A + S L+P + + G+ SSS++ S
Sbjct: 299 -----VAAMSLQSH--------LIPGL-----------NLAAVGLFPASSSAVPPPPSSV 334
Query: 531 MGDSPYGSMSSYSSKLYGGLPPPL-TLEVLVPANAVGKVIGKAGSNLANIRKISGATI-- 587
G +PY S +PP T+ V +PA AVG +IGK G ++ + + + A+I
Sbjct: 335 SGAAPYSSF----------MPPEQETVHVFIPAQAVGAIIGKKGQHIKQLSRFASASIKI 384
Query: 588 ---EMSDSKSSRGDRVALISGTPEQKRAAENLI 617
E DSK R+ +I+G PE + A+ I
Sbjct: 385 APPETPDSKV----RMVVITGPPEAQFKAQGRI 413
Score = 45.4 bits (106), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 77/164 (46%), Gaps = 20/164 (12%)
Query: 306 EELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVD--DTKDNRDECVITVTAIESP 363
E+ + V P +G +IGK G IK + + + A I + +T D++ V+ I P
Sbjct: 347 EQETVHVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVV----ITGP 402
Query: 364 DDIKSMA---VEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKA 420
+ + A + L + +++ + + V + G +IGK G +NE++ T A
Sbjct: 403 PEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAA 462
Query: 421 DVRISKGDKPKCADANDE-LVEVVGEVGS-------VRDALVQI 456
+V + + P D N++ +V+++G + +RD L Q+
Sbjct: 463 EVVVPRDQTP---DENEQVIVKIIGHFYASQMAQRKIRDILAQV 503
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 47/97 (48%), Gaps = 10/97 (10%)
Query: 138 EKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLI 197
E+E + +P+ IIGK G IK+L SIK+ P + P M V+I
Sbjct: 347 EQETVHVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPET--PDSKVRM-----VVI 399
Query: 198 SGESEAVKKALFAISAIMYK---FSPREDIPLETTVR 231
+G EA KA I + + F P+E++ LET +R
Sbjct: 400 TGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIR 436
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 59/148 (39%), Gaps = 24/148 (16%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDP-FPGAKDRVVTIYSHVKDK 93
E + P +G++IGK G+ I + + A +K+ P P +K R+V I
Sbjct: 347 EQETVHVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVVI------- 399
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
+A K I + K + K E I VP+S +
Sbjct: 400 ---------------TGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGR 444
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+IGK G T+ L++ T + V P+D +
Sbjct: 445 VIGKGGKTVNELQNLTAAEV-VVPRDQT 471
>gi|110740181|dbj|BAF01989.1| HEN4 [Arabidopsis thaliana]
Length = 263
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 48/68 (70%)
Query: 555 TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAE 614
T+E+ VPANA+ V G+ G NL +R+ISGA + + + DR+ +ISGTP+Q +AA+
Sbjct: 183 TVEIRVPANAMSFVYGEQGYNLEQLRQISGARVIIHEPPLGTSDRIIVISGTPDQTQAAQ 242
Query: 615 NLIQAFIM 622
NL+ AFI+
Sbjct: 243 NLLHAFIL 250
>gi|147903491|ref|NP_001091320.1| poly(rC) binding protein 1 [Xenopus laevis]
gi|124481736|gb|AAI33216.1| LOC100037147 protein [Xenopus laevis]
Length = 221
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 97/192 (50%), Gaps = 17/192 (8%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDD-- 365
L IR+L ++G +IGK G T+K +R+ SGA+I++ + N E ++T+T P D
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG---PTDAI 68
Query: 366 IKSMAVEAVLLLQTKINDEDDDT------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
K+ A+ A + IN + T VT+RL+V + G +IGK GS I EIR+ T
Sbjct: 69 FKAFAMIAYKFEEDIINSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 128
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNP-PVGA 478
+ V+++ P ++ + V + G ++ + QI + + + K P P A
Sbjct: 129 SQVQVAGDMLP---NSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASA 185
Query: 479 DHIYSSGTGISM 490
I++ G S+
Sbjct: 186 PVIFAGGQAYSI 197
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 89/201 (44%), Gaps = 42/201 (20%)
Query: 29 DEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYS 88
E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R+VTI
Sbjct: 6 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTI-- 61
Query: 89 HVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIA--------NAVANATDNDKKRKEKE 140
DA+ K A IA N+++N+T K
Sbjct: 62 --------------------TGPTDAIFKAFAMIAYKFEEDIINSMSNSTATSK---PPV 98
Query: 141 ECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGE 200
+++VP+SQ ++IGK G+ IK +R T + ++V T + V ISG
Sbjct: 99 TLRLVVPASQCGSLIGKGGSKIKEIRESTGSQVQVAGDMLPNST-------ERAVTISGT 151
Query: 201 SEAVKKALFAISAIMYKFSPR 221
+A+ + + I +M + P+
Sbjct: 152 PDAIIQCVKQICVVMLESPPK 172
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+TIRLL+ K +G IIGK G + ++R+ + A + IS+G+ P + +V + G
Sbjct: 13 TLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCP------ERIVTITGPTD 66
Query: 448 SVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
++ A I + +D ++ + + PPV
Sbjct: 67 AIFKAFAMIAYKFEEDIINSMSNSTATSKPPV 98
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Query: 552 PPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMS-DSKSSRGDRVALISGTPE 608
PP+TL ++VPA+ G +IGK GS + IR+ +G+ ++++ D + +R ISGTP+
Sbjct: 96 PPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGSQVQVAGDMLPNSTERAVTISGTPD 153
Score = 42.4 bits (98), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 40/66 (60%), Gaps = 3/66 (4%)
Query: 302 ASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDV-DDTKDNRDECVITVTAI 360
A+ + +R++ P ++ G +IGKGG IK IR+++G+Q+ V D N E +T++
Sbjct: 92 ATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGSQVQVAGDMLPNSTERAVTISG- 150
Query: 361 ESPDDI 366
+PD I
Sbjct: 151 -TPDAI 155
>gi|358055492|dbj|GAA98612.1| hypothetical protein E5Q_05299 [Mixia osmundae IAM 14324]
Length = 549
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 153/362 (42%), Gaps = 55/362 (15%)
Query: 300 VGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTA 359
+ + + + +R L +IGKGG +IK IR+ +G ++ V ++ N E ++ V+
Sbjct: 180 IATAANPHVTLRALIVTQDASIIIGKGGQSIKEIREKAGVKVLVSESIPNNPERILNVSG 239
Query: 360 IESPDDIKSMAVEAVLLLQTKINDEDDD--------TVTIRLLVSSKVIGCIIGKSGSII 411
+ D + +A L+ +INDE D VTIR +V + +G IIGK G+ I
Sbjct: 240 LL--DGVS----KAFGLIVRRINDEPFDVPSVPGSRAVTIRFIVPNHRMGSIIGKQGAKI 293
Query: 412 NEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALV---QIILRLRDDALKD- 467
EI+ + A ++ ++ P + + ++ + G ++ A+ I+ D A+ +
Sbjct: 294 KEIQDASGARLQATESMLP---GSTERILSISGVADAIHIAVYYTGAILAEHSDRAVNNT 350
Query: 468 --RDG---SRNPPVGADHIYSSGTGISMPPLLP-------SIPPVGPLGYDQRADSGSGI 515
R G + P G PP P + P V P GY G
Sbjct: 351 PYRPGLPPTSYGPPPPRPGSGPSAGGYYPPAPPHHDPYRVAAPMVNPTGYHDPYRGMGGP 410
Query: 516 GMLSSSSLYGYGSLS-------MGDSPYGSMSSYSSKLYGGLPPPL---------TLEVL 559
+ +G G P + ++ S+ +G PPP+ T +V
Sbjct: 411 PAAMAPPQHGQAPQQHFAAPPVQGMPPAQAQATTSAMPFG--PPPVATGPVGPNQTQQVY 468
Query: 560 VPANAVGKVIGKAGSNLANIRKISGATIEMSDSK----SSRGDRVALISGTPEQKRAAEN 615
+P VG +IGK G + +R SGA I++ + + G+R+ +SG P + A
Sbjct: 469 IPNELVGPIIGKGGLKINELRNNSGAHIKIMEPSEGGLNPNGERLVNVSGQPANIQMAVQ 528
Query: 616 LI 617
++
Sbjct: 529 ML 530
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 41/74 (55%)
Query: 390 TIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSV 449
T ++ + ++++G IIGK G INE+R + A ++I + + + LV V G+ ++
Sbjct: 464 TQQVYIPNELVGPIIGKGGLKINELRNNSGAHIKIMEPSEGGLNPNGERLVNVSGQPANI 523
Query: 450 RDALVQIILRLRDD 463
+ A+ + RL +
Sbjct: 524 QMAVQMLYQRLEQE 537
>gi|302916853|ref|XP_003052237.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256733176|gb|EEU46524.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 373
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 147/338 (43%), Gaps = 56/338 (16%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
+L +R + + G +IGKGG + +R +G + V + V+T+T D I
Sbjct: 47 QLTLRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTITG--GCDAI 104
Query: 367 -KSMAVEAVLLLQTKIND------EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
++ A+ A LL+ + + T I+LL+S +G IIG+ G I I+ +
Sbjct: 105 SRAYAIVARALLEGAPAMGMGGIVQSNGTHPIKLLISHNQMGTIIGRQGLKIKHIQDASG 164
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGAD 479
+ K P+ + + +VEV G ++ A+ +I L DD
Sbjct: 165 VRMVAQKEMLPQ---STERIVEVQGTPEGIQRAVWEICKCLVDD---------------- 205
Query: 480 HIYSSGTGISM-PPLLPSIPPV------GPLGYDQRADSGSGIGMLSSSSLYGYGS---L 529
+ GTG + P++ + P G GY Q GSG S + G+
Sbjct: 206 --WQRGTGTVLYNPVVRTQPASSTSVGSGGAGYSQ----GSGRSEYGSPRVMRTGNGADF 259
Query: 530 SMGDS-PYGSMSSYSSKLYGGLPPPL--------TLEVLVPANAVGKVIGKAGSNLANIR 580
S G S PY S + + G PP T + +PA+ VG +IG+AGS ++ IR
Sbjct: 260 SNGSSRPYNRRSDSDAAIRG--PPTHDENGEEIQTQNISIPADMVGCIIGRAGSKISEIR 317
Query: 581 KISGATIEMSDS-KSSRGDRVALISGTPEQKRAAENLI 617
K SGA I ++ + G+R+ I GT + +A L+
Sbjct: 318 KTSGARISIAKAPHDETGERMFTIMGTAKANESALFLL 355
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 79/374 (21%), Positives = 144/374 (38%), Gaps = 61/374 (16%)
Query: 29 DEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYS 88
DE+ + + R + G +IGK GK + +R ET + V G DRV+TI
Sbjct: 40 DEEYAQAQLTLRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTI-- 97
Query: 89 HVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAV-----ANATDNDKKRKEKEECQ 143
DA+ + +A +A A+ A + +
Sbjct: 98 --------------------TGGCDAISRAYAIVARALLEGAPAMGMGGIVQSNGTHPIK 137
Query: 144 ILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEA 203
+L+ +Q IIG+ G IK ++ + +++ + P + + V + G E
Sbjct: 138 LLISHNQMGTIIGRQGLKIKHIQDA--SGVRMVAQKEMLPQST-----ERIVEVQGTPEG 190
Query: 204 VKKALFAISAIMYKFSPR--EDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPS 261
+++A++ I + R + VR P S + G Y
Sbjct: 191 IQRAVWEICKCLVDDWQRGTGTVLYNPVVRTQP-----ASSTSVGSGGAGYSQG------ 239
Query: 262 RSVPSILGAARVPDLQGYAD--TGNTWPVYSTGLSLVSGLVGA----SQSEELVIR-VLC 314
S S G+ RV AD G++ P Y+ + + G EE+ + +
Sbjct: 240 -SGRSEYGSPRVMRTGNGADFSNGSSRP-YNRRSDSDAAIRGPPTHDENGEEIQTQNISI 297
Query: 315 PFNKIGRVIGKGGGTIKSIRQASGAQIDV-----DDTKDNRDECVITVTAIESPDDIKSM 369
P + +G +IG+ G I IR+ SGA+I + D+T + + T A ES +
Sbjct: 298 PADMVGCIIGRAGSKISEIRKTSGARISIAKAPHDETGERMFTIMGTAKANESALFLLYE 357
Query: 370 AVEAVLLLQTKIND 383
+EA + ++++ +
Sbjct: 358 NLEAEKMRRSQLQE 371
>gi|495128|emb|CAA53546.1| mCBP [Mus musculus]
Length = 331
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 157/336 (46%), Gaps = 36/336 (10%)
Query: 297 SGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVIT 356
+G++ + L IR+L ++G +IGK G ++K +R+ SGA+I++ + N E +IT
Sbjct: 3 TGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIIT 60
Query: 357 VTAIESPDDIKSMAVEAVL-LLQTKINDEDDDT-------VTIRLLVSSKVIGCIIGKSG 408
+ P + A ++ L+ I+ ++ VT+RL+V + G +IGK G
Sbjct: 61 LAG---PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGG 117
Query: 409 SIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDR 468
I EIR+ T A V+++ P ++ + + + G S+ + + QI + + + K
Sbjct: 118 CKIKEIRESTGAQVQVAGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLESPPKGV 174
Query: 469 DGSRNP-PVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYG 527
P P + I++ G ++ +IP Q A S +
Sbjct: 175 TIPYRPKPSSSPVIFAGGQAYTIQGQY-AIPQPDLTKLHQLAMQQS------------HF 221
Query: 528 SLSMGDSPYGSMSSYSSKL---YGGL---PPPLTLEVLVPANAVGKVIGKAGSNLANIRK 581
++ G++ + + S S ++ + GL + E+ +P + +G +I + G+ + IR+
Sbjct: 222 PMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIRRQGAKINEIRQ 281
Query: 582 ISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLI 617
+SGA I++++ DR I+G+ A+ LI
Sbjct: 282 MSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLI 317
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 82/352 (23%), Positives = 148/352 (42%), Gaps = 77/352 (21%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH 89
E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R++T
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIIT---- 60
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAV-----ANATDNDKKRKEKEECQI 144
L +A+ K A I + + ++ T++ + ++
Sbjct: 61 ------------------LAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRL 102
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAV 204
+VP+SQ ++IGK G IK +R T ++V T + + I+G +++
Sbjct: 103 VVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNST-------ERAITIAGIPQSI 155
Query: 205 KKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSV 264
+ + I +M + P+ T+ P PS P+ GG A I ++
Sbjct: 156 IECVKQICVVMLESPPKG-----VTIPYRPK----PSSSPVIFAGG---QAYTIQGQYAI 203
Query: 265 PSILGAARVPDL---QGYADTGNTWPVY--STGLSLV-----------SGLVGASQ--SE 306
P PDL A + +P+ +TG S + +GL ++Q S
Sbjct: 204 PQ-------PDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSH 256
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
EL I P + IG +I + G I IRQ SGAQI + + + + +T+T
Sbjct: 257 ELTI----PNDLIGCIIRRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTIT 304
Score = 39.7 bits (91), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 383 DEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEV 442
D T + L + + +IGCII + G+ INEIR+ + A ++I+ + D V +
Sbjct: 248 DASAQTTSHELTIPNDLIGCIIRRQGAKINEIRQMSGAQIKIAN----PVEGSTDRQVTI 303
Query: 443 VGEVGSVRDALVQIILRLRDD 463
G S+ A I +RL +
Sbjct: 304 TGSAASISLAQYLINVRLSSE 324
>gi|326674258|ref|XP_003200102.1| PREDICTED: RNA-binding protein Nova-1 isoform 2 [Danio rerio]
Length = 517
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 90/184 (48%), Gaps = 19/184 (10%)
Query: 297 SGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD-----NRD 351
S +VG + E ++VL P G +IGKGG TI +++ +GA I + +KD
Sbjct: 67 SDIVGFHEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTER 126
Query: 352 ECVI--TVTAIESPDDI----------KSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKV 399
C+I TV A+ + D + E V +LQ + D +L+V +
Sbjct: 127 VCLIQGTVEALNNVHDFIAEKVREMPQSAQKTEPVSILQPQTTVNPDRVKQAKLIVPNST 186
Query: 400 IGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILR 459
G IIGK G+ + + +++ A V++S+ KP + + +V + GE R A+ I+ +
Sbjct: 187 AGLIIGKGGATVKAVMEQSGAWVQLSQ--KPDGINLQERVVTISGEPEQNRKAVEIIVQK 244
Query: 460 LRDD 463
+++D
Sbjct: 245 IQED 248
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 83/187 (44%), Gaps = 35/187 (18%)
Query: 34 EESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV---DPFPGAKDRVVTIYSHV 90
E ++L P GS+IGK G+ I +++ET A +K+ D +PG +RV I V
Sbjct: 75 EGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTV 134
Query: 91 KDKEDV---------EVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEE 141
+ +V E+ EP+ Q T N + K +
Sbjct: 135 EALNNVHDFIAEKVREMPQSAQKTEPVSILQP--------------QTTVNPDRVK---Q 177
Query: 142 CQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGES 201
+++VP+S + IIGK GAT+K + ++ ++++ K P E V ISGE
Sbjct: 178 AKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQK----PDGINLQE--RVVTISGEP 231
Query: 202 EAVKKAL 208
E +KA+
Sbjct: 232 EQNRKAV 238
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 41/69 (59%), Gaps = 7/69 (10%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS---SRGDRVALISGTPEQKRA 612
L+VL+P+ A G +IGK G + ++K +GATI++S SK +RV LI GT E
Sbjct: 80 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVE---- 135
Query: 613 AENLIQAFI 621
A N + FI
Sbjct: 136 ALNNVHDFI 144
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS---SRGDRVALISGTPEQKRA 612
+E+ VP N VG ++GK G L ++++GA I++S +R I+G+P +A
Sbjct: 434 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGSPAATQA 493
Query: 613 AENLI 617
A+ LI
Sbjct: 494 AQYLI 498
>gi|195119576|ref|XP_002004307.1| GI19683 [Drosophila mojavensis]
gi|193909375|gb|EDW08242.1| GI19683 [Drosophila mojavensis]
Length = 509
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 86/177 (48%), Gaps = 12/177 (6%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
E +R+L P + G VIGKGG I+ +R A + VDD++ E I ++ DI
Sbjct: 21 EETVRILIPSSIAGAVIGKGGQHIQKMRTQYKATVSVDDSQG--PERTIQIST-----DI 73
Query: 367 KSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISK 426
S ++ K +E D+ +RLL+ + GC+IGK G I EIR R R K
Sbjct: 74 DSTL--EIITEMLKYFEERDEEYDVRLLIHQSLAGCVIGKGGQKIKEIRDRIGC--RFLK 129
Query: 427 GDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYS 483
+ D +V+ VG+ V +A+ ++I RD +K + + P+ D +Y+
Sbjct: 130 VFSNVAPQSTDRVVQTVGKQSQVIEAVREVITLTRDTPIKGPIHNYD-PMNFDRVYA 185
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 69/155 (44%), Gaps = 38/155 (24%)
Query: 14 NDRDGKNQKRRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV 73
ND DG ++R + NEE+V RIL P + G+VIGK G+ I +R + +A V V
Sbjct: 6 NDGDGPQDQKR-----NRRNEETV--RILIPSSIAGAVIGKGGQHIQKMRTQYKATVSVD 58
Query: 74 DPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDND 133
D +R + I + + D+ L++ +
Sbjct: 59 D--SQGPERTIQISTDI----------------------DSTLEIITEMLKYF------- 87
Query: 134 KKRKEKEECQILVPSSQSANIIGKAGATIKRLRSK 168
++R E+ + ++L+ S + +IGK G IK +R +
Sbjct: 88 EERDEEYDVRLLIHQSLAGCVIGKGGQKIKEIRDR 122
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 39/70 (55%)
Query: 131 DNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAME 190
D + R+ +E +IL+PSS + +IGK G I+++R++ + ++ V E T + +
Sbjct: 13 DQKRNRRNEETVRILIPSSIAGAVIGKGGQHIQKMRTQYKATVSVDDSQGPERTIQISTD 72
Query: 191 FDNFVLISGE 200
D+ + I E
Sbjct: 73 IDSTLEIITE 82
>gi|357449597|ref|XP_003595075.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355484123|gb|AES65326.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 470
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 92/183 (50%), Gaps = 18/183 (9%)
Query: 38 IYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVE 97
++R++ P G +G +IG+ G +I + ET+ARV+V+D G DR++ I KE++E
Sbjct: 71 VFRLIVPVGKVGGIIGRKGDLIKKLCDETKARVRVLDADLGIPDRIILI----SGKEELE 126
Query: 98 VDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQI--LVPSSQSANII 155
+ A DA++++ ++ ++N K C I LV S+Q+ ++I
Sbjct: 127 A--------AISPAMDAVIRIFKRVSGLSETDSEN-KGPAGVTLCSIRLLVASTQAISLI 177
Query: 156 GKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIM 215
GK G I+ ++ + S++V D A + V + GE+ V KAL A+ +
Sbjct: 178 GKQGTIIRSIQESSGASVRVLSGDE---VQYFATAEERIVDLQGEALMVLKALEAVIGHL 234
Query: 216 YKF 218
KF
Sbjct: 235 RKF 237
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 86/165 (52%), Gaps = 12/165 (7%)
Query: 309 VIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKS 368
V R++ P K+G +IG+ G IK + + A++ V D + +I ++ E + S
Sbjct: 71 VFRLIVPVGKVGGIIGRKGDLIKKLCDETKARVRVLDADLGIPDRIILISGKEELEAAIS 130
Query: 369 MAVEAVLLLQTKIN--DEDDD---------TVTIRLLVSSKVIGCIIGKSGSIINEIRKR 417
A++AV+ + +++ E D +IRLLV+S +IGK G+II I++
Sbjct: 131 PAMDAVIRIFKRVSGLSETDSENKGPAGVTLCSIRLLVASTQAISLIGKQGTIIRSIQES 190
Query: 418 TKADVRISKGDKPK-CADANDELVEVVGEVGSVRDALVQIILRLR 461
+ A VR+ GD+ + A A + +V++ GE V AL +I LR
Sbjct: 191 SGASVRVLSGDEVQYFATAEERIVDLQGEALMVLKALEAVIGHLR 235
>gi|344276217|ref|XP_003409905.1| PREDICTED: poly(rC)-binding protein 4-like [Loxodonta africana]
Length = 362
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 134/296 (45%), Gaps = 50/296 (16%)
Query: 347 KDNRDECVITVTAIESPDDIKSMA------VEAVLLLQTKINDED------------DDT 388
K R IT++ P+ I ++ AV ++ K+ DED
Sbjct: 2 KRGRSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKL-DEDLCAAPANGGNISRPP 60
Query: 389 VTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGS 448
VT+RL++ + G +IGK+G+ I EIR+ T A V+++ P ++ + V V G
Sbjct: 61 VTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLP---NSTERAVTVSG---- 113
Query: 449 VRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQR 508
V DA++ + ++ L+ +PP GA Y +S+ +L L +Q
Sbjct: 114 VPDAIILCVRQICAVILE------SPPKGATIPYHPS--LSLGTVL--------LSANQG 157
Query: 509 ADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPL---TLEVLVPANAV 565
G ++ + + LS P+ S S + GL P + E LVP + +
Sbjct: 158 FSVQGQYGAVTPAEVTKLQQLSGHTVPFASPS-----VVAGLDPSTQTSSQEFLVPNDLI 212
Query: 566 GKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFI 621
G VIG+ GS ++ IR++SGA I++ + G+R I+G+P A+ LI A +
Sbjct: 213 GCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYLITACL 268
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 88/222 (39%), Gaps = 65/222 (29%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDV-DDTKDNRDECVITVTAI------ 360
+ +R++ P ++ G +IGK G IK IR+ +GAQ+ V D N E +TV+ +
Sbjct: 61 VTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIIL 120
Query: 361 ----------ESPDD------IKSMAVEAVLLLQ------------------TKINDEDD 386
ESP S+++ VLL TK+
Sbjct: 121 CVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSG 180
Query: 387 DTVTI------------------RLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGD 428
TV LV + +IGC+IG+ GS I+EIR+ + A ++I
Sbjct: 181 HTVPFASPSVVAGLDPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGN-- 238
Query: 429 KPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDG 470
+ A + V + G S+ AL Q ++ + K G
Sbjct: 239 --QAEGAGERHVTITGSPVSI--ALAQYLITACLETAKSTSG 276
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 97/217 (44%), Gaps = 30/217 (13%)
Query: 143 QILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESE 202
++++P+SQ ++IGKAG IK +R T ++V T + V +SG +
Sbjct: 64 RLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNST-------ERAVTVSGVPD 116
Query: 203 AVKKALFAISAIMYKFSPR-EDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPS 261
A+ + I A++ + P+ IP ++ ++ S + G Y P
Sbjct: 117 AIILCVRQICAVILESPPKGATIPYHPSLSLG---TVLLSANQGFSVQGQYGAVTP---- 169
Query: 262 RSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGR 321
A V LQ +G+T P S S+V+GL ++Q+ L P + IG
Sbjct: 170 ---------AEVTKLQQL--SGHTVPFASP--SVVAGLDPSTQTSSQ--EFLVPNDLIGC 214
Query: 322 VIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
VIG+ G I IRQ SGA I + + + E +T+T
Sbjct: 215 VIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTIT 251
Score = 38.9 bits (89), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 37 VIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTI 86
V R++ P GS+IGK+G I IR+ T A+V+V D P + +R VT+
Sbjct: 61 VTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTV 111
Score = 38.5 bits (88), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 29/46 (63%)
Query: 41 ILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTI 86
L P+ +IG VIG+ G I+ IRQ + A +K+ + GA +R VTI
Sbjct: 205 FLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTI 250
>gi|195336152|ref|XP_002034707.1| GM22026 [Drosophila sechellia]
gi|194126677|gb|EDW48720.1| GM22026 [Drosophila sechellia]
Length = 345
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 88/177 (49%), Gaps = 12/177 (6%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
E +R+L P + G VIGKGG I+ +R A + VDD++ E I ++A DI
Sbjct: 22 EETVRILIPSSIAGAVIGKGGQHIQKMRTQYKATVSVDDSQG--PERTIQISA-----DI 74
Query: 367 KSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISK 426
+S ++ K +E D+ +RLL+ + GC+IGK G I EIR R R K
Sbjct: 75 ESTL--EIITEMLKYFEERDEDFDVRLLIHQSLAGCVIGKGGQKIKEIRDRIGC--RFLK 130
Query: 427 GDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYS 483
+ D +V+ VG+ V +A+ ++I RD +K + + P+ D +Y+
Sbjct: 131 VFSNVAPQSTDRVVQTVGKQSQVIEAVREVITLTRDTPIKGAIHNYD-PMNFDRVYA 186
Score = 39.7 bits (91), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 33/143 (23%)
Query: 26 NEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVT 85
++K + NEE+V RIL P + G+VIGK G+ I +R + +A V V D +R +
Sbjct: 14 DQKRNRRNEETV--RILIPSSIAGAVIGKGGQHIQKMRTQYKATVSVDD--SQGPERTIQ 69
Query: 86 IYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQIL 145
I + ++ ++ + +LK ++R E + ++L
Sbjct: 70 ISADIESTLEIITE---------------MLKYF--------------EERDEDFDVRLL 100
Query: 146 VPSSQSANIIGKAGATIKRLRSK 168
+ S + +IGK G IK +R +
Sbjct: 101 IHQSLAGCVIGKGGQKIKEIRDR 123
Score = 39.3 bits (90), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 53/110 (48%), Gaps = 14/110 (12%)
Query: 131 DNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAME 190
D + R+ +E +IL+PSS + +IGK G I+++R++ + ++ V E T
Sbjct: 14 DQKRNRRNEETVRILIPSSIAGAVIGKGGQHIQKMRTQYKATVSVDDSQGPERT------ 67
Query: 191 FDNFVLISGESEAVKKALFAISAIMYKFSPR-EDIPLETTVREAPPSIII 239
+ IS + E+ L I+ ++ F R ED + + ++ +I
Sbjct: 68 ----IQISADIES---TLEIITEMLKYFEERDEDFDVRLLIHQSLAGCVI 110
>gi|296085941|emb|CBI31382.3| unnamed protein product [Vitis vinifera]
Length = 357
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 126/318 (39%), Gaps = 78/318 (24%)
Query: 34 EESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV---DPFPGAKDRVVTIYSHV 90
E+S R L + GSVIGK G IN + ++ AR+++ + FPG DR++ I
Sbjct: 79 EKSTYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTSDRIIMISGAT 138
Query: 91 KDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQ 150
E + A + L K+ + + T++ + + + +++VP+S
Sbjct: 139 N--------------EIIKAMELILAKLLSEMH------TEDGDEADPRSKVRLIVPNSS 178
Query: 151 SANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFA 210
IIGK G+TIK ++ SIK++P+D + + D V + G ++++ + A
Sbjct: 179 CGGIIGKGGSTIKSFIEDSQASIKISPQDNNYLGLT-----DRLVTLMG---SLEEQMRA 230
Query: 211 ISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGA 270
I I+ K + ED P T AP S + Y P G RS +G
Sbjct: 231 IDLILSKLT--ED-PHYTQFMNAPFSYAAAYNSMNYGPNGAGGKFQNNKEDRSNSVTIGV 287
Query: 271 ARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTI 330
A IG V+G+GG I
Sbjct: 288 AD--------------------------------------------EHIGLVVGRGGRNI 303
Query: 331 KSIRQASGAQIDVDDTKD 348
I QASGA+I + D D
Sbjct: 304 MDISQASGARIKISDRGD 321
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 76/161 (47%), Gaps = 10/161 (6%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD----NRDECVITVTAIESPDD 365
IR L G VIGKGG TI + SGA+I + + D ++ A + +
Sbjct: 84 IRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTSDRIIMISGA--TNEI 141
Query: 366 IKSMAVEAVLLL---QTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADV 422
IK+M + LL T+ DE D +RL+V + G IIGK GS I + ++A +
Sbjct: 142 IKAMELILAKLLSEMHTEDGDEADPRSKVRLIVPNSSCGGIIGKGGSTIKSFIEDSQASI 201
Query: 423 RISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDD 463
+IS D D LV ++G + A+ I+ +L +D
Sbjct: 202 KISPQDNNYLG-LTDRLVTLMGSLEEQMRAIDLILSKLTED 241
Score = 39.7 bits (91), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 48/94 (51%), Gaps = 2/94 (2%)
Query: 382 NDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVE 441
+D + + IR LVS+ G +IGK GS IN+ + ++ A +++S+ + +D ++
Sbjct: 75 SDFMEKSTYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSR-NHEFFPGTSDRIIM 133
Query: 442 VVGEVGSVRDALVQIILRLRDDALKDRDGSRNPP 475
+ G + A+ I+ +L + + DG P
Sbjct: 134 ISGATNEIIKAMELILAKLLSE-MHTEDGDEADP 166
>gi|291402366|ref|XP_002717547.1| PREDICTED: poly(rC) binding protein 2-like [Oryctolagus cuniculus]
Length = 334
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 85/342 (24%), Positives = 162/342 (47%), Gaps = 45/342 (13%)
Query: 297 SGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVIT 356
+G++ + L IR+L ++G +IGK G ++K +R+ SGA+I++ + N E +IT
Sbjct: 3 TGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVK-MREESGARINISE--GNCPERIIT 59
Query: 357 VTAIESPDDIKSMAVEAVL-LLQTKINDEDDDT-------VTIRLLVSSKVIGCIIGKSG 408
+ P + A ++ L+ I+ ++ VT+RL+V + G +IGK G
Sbjct: 60 LAG---PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGG 116
Query: 409 SIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDR 468
I EIR+ T A V+++ P ++ + + + G S+ + + QI + + +
Sbjct: 117 CKIKEIRESTGAQVQVAGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLETL---- 169
Query: 469 DGSRNPPVGADHIYSSGTGISMPPLLPSIPPV---GPLGYD---QRADSGSGIGMLSSSS 522
S++PP G Y P PS PV G Y Q A + L +
Sbjct: 170 --SQSPPKGVTIPY-------WPK--PSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLA 218
Query: 523 LY-GYGSLSMGDSPYGSMSSYSSKL---YGGL---PPPLTLEVLVPANAVGKVIGKAGSN 575
+ + ++ G++ + + S S ++ + GL + E+ +P + +G +IG+ G+
Sbjct: 219 MQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQGAK 278
Query: 576 LANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLI 617
+ IR++SGA I++++ DR I+G+ A+ LI
Sbjct: 279 INEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLI 320
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 150/355 (42%), Gaps = 80/355 (22%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH 89
E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R++T
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVK-MREESGARINISEG--NCPERIIT---- 59
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAV-----ANATDNDKKRKEKEECQI 144
L +A+ K A I + + ++ T++ + ++
Sbjct: 60 ------------------LAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRL 101
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAV 204
+VP+SQ ++IGK G IK +R T ++V T + + I+G +++
Sbjct: 102 VVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNST-------ERAITIAGIPQSI 154
Query: 205 KKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADP-ILPSRS 263
+ + I +M LET + P + IP Y P P++ P I
Sbjct: 155 IECVKQICVVM----------LETLSQSPPKGVTIP-----YWP---KPSSSPVIFAGGQ 196
Query: 264 VPSILGAARVPD-----LQGYADTGNTWPVY--STGLSLV-----------SGLVGASQ- 304
+I G +P L A + +P+ +TG S + +GL ++Q
Sbjct: 197 AYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQT 256
Query: 305 -SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
S EL I P + IG +IG+ G I IRQ SGAQI + + + + +T+T
Sbjct: 257 TSHELTI----PNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTIT 307
>gi|358056167|dbj|GAA97907.1| hypothetical protein E5Q_04587 [Mixia osmundae IAM 14324]
Length = 531
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 94/387 (24%), Positives = 157/387 (40%), Gaps = 89/387 (22%)
Query: 301 GASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAI 360
G +++ L++R L + G VIG+ G + IR+ + + V E V+TVT
Sbjct: 136 GQAEAPTLIMRALVSSREAGIVIGRQGKNVADIREKAQVKAGVSKLVPGVSERVLTVTG- 194
Query: 361 ESPDDIKSMAVEAVLLLQTKINDEDD--------------DTVTIRLLVSSKVIGCIIGK 406
I +A L+ QT +++ T+T+RLL+SS +G +IGK
Sbjct: 195 ----QISGVARAFGLICQTIMDNSSGIPNDSPSTYTGLSGSTLTLRLLISSAQMGGVIGK 250
Query: 407 SGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALK 466
+G+ I I++ + + SK P+ + + LVE+ G V A+ +I L +D K
Sbjct: 251 AGTKIKSIQQTSGTRMAASKELLPQ---STERLVEISGRPEQVEKAVAEIAKALVEDEAK 307
Query: 467 DRDGSRNPPVGADHIYSSGTGISMPPL--LPSIPPV------GPLGYDQRADSGSGIGML 518
VG + + P L L SIPP+ G A G GM+
Sbjct: 308 A--------VGTIAFHPANLN---PELSGLQSIPPIMRSSSSGTASRAPAASDGRAPGMM 356
Query: 519 S---------------------------SSSLYGYGSLSM-------------GDSP--- 535
S ++ LYGY + + P
Sbjct: 357 SMQQPHQQPQHMYPAAYAQHAQPAPAPAAAPLYGYTNDHAPPPRRYVPPQGYRANDPRNT 416
Query: 536 ----YGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSD 591
Y + +S +S + P T + +P++ VG +IGK G + +IRK SG+ I ++
Sbjct: 417 PQDRYRANASIASAAHAPDPNLRTQNISIPSDMVGCIIGKGGQKINDIRKSSGSKISIAK 476
Query: 592 SKSSR-GDRVALISGTPEQKRAAENLI 617
+ G+R+ I+GT + A L+
Sbjct: 477 TAHDETGERMFTITGTAQNNETALFLL 503
Score = 39.3 bits (90), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 6/72 (8%)
Query: 554 LTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS---SRGDRVALISGTPEQ- 609
LTL +L+ + +G VIGKAG+ + +I++ SG M+ SK +R+ ISG PEQ
Sbjct: 233 LTLRLLISSAQMGGVIGKAGTKIKSIQQTSG--TRMAASKELLPQSTERLVEISGRPEQV 290
Query: 610 KRAAENLIQAFI 621
++A + +A +
Sbjct: 291 EKAVAEIAKALV 302
>gi|242002844|ref|XP_002436065.1| RNA-binding protein Nova-1, putative [Ixodes scapularis]
gi|215499401|gb|EEC08895.1| RNA-binding protein Nova-1, putative [Ixodes scapularis]
Length = 474
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 107/440 (24%), Positives = 183/440 (41%), Gaps = 50/440 (11%)
Query: 1 MGDSGKRYRSQRDNDRDGKNQKRRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVIN 60
+GDS KR D++ D KR G + ++IL P G++IGK G+ I
Sbjct: 21 IGDSRKR---PLDSELDIGATKR----SHHGGGNGTYHFKILVPAVAAGAIIGKGGETIA 73
Query: 61 SIRQETRARVKVV---DPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLK 117
+++E ARVK+ D +PG +RV I V E V EF E + D K
Sbjct: 74 LLQKEAGARVKMSKSNDFYPGTTERVCLITGSV---EGVLRIHEF-IMEKIKEKPDPTAK 129
Query: 118 VHAAIANAVANATDNDKKRKEKEECQ--ILVPSSQSANIIGKAGATIKRLRSKTRTSIKV 175
+ A D D K+ + E Q ILVP+S + IIGK G+ IK+++ ++ +++
Sbjct: 130 I----------AIDFDHKQPAEREKQVKILVPNSTAGMIIGKGGSYIKQIKEESGAYVQI 179
Query: 176 TPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVRE--A 233
+ K H+ A + + + GE E KKA I A + + P+ L + E
Sbjct: 180 SQKSKD---HALA---ERCITVIGELENNKKACHMILAKIVE-DPQSGSCLHVSYAEVTG 232
Query: 234 PPSIIIPSDVPIYPPGG----LYPNADPILPSRSVPSILGAARVPDLQGYADTGNTWPVY 289
P + P+ P P +P P + + V GY +
Sbjct: 233 PVANFNPTGSPYANPSSSLVPSFPGVAPAVAGNVAQLLENVKAVLRSNGYTEQATADIAA 292
Query: 290 STGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD- 348
+ G G++G+S +L N G ++ GG + ++ + AQ + +
Sbjct: 293 AMGTLASYGVLGSSLGA-----LLAGMN--GTLVAGGGNPPQPLQMGTNAQQAIGNGTGL 345
Query: 349 --NRDECVITVTAIESPDDIKSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGK 406
N + + T + + M ++ + ++ D V L V ++G I+G
Sbjct: 346 PVNNNSFGLG-TGLGAIPGAGPMQCKSPPPPGGAVAEKAGDAVKRDLEVGENIVGAILGP 404
Query: 407 SGSIINEIRKRTKADVRISK 426
G + EI++ + A ++ISK
Sbjct: 405 GGKSLVEIQRFSGAAIQISK 424
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 83/179 (46%), Gaps = 39/179 (21%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD-----NRDECVITVTAIESPD 364
++L P G +IGKGG TI +++ +GA++ + + D C+IT +
Sbjct: 52 FKILVPAVAAGAIIGKGGETIALLQKEAGARVKMSKSNDFYPGTTERVCLITGS------ 105
Query: 365 DIKSMAVEAVL----LLQTKINDEDDDTVTI----------------RLLVSSKVIGCII 404
VE VL + KI ++ D T I ++LV + G II
Sbjct: 106 ------VEGVLRIHEFIMEKIKEKPDPTAKIAIDFDHKQPAEREKQVKILVPNSTAGMII 159
Query: 405 GKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDD 463
GK GS I +I++ + A V+IS+ K K + + V+GE+ + + A I+ ++ +D
Sbjct: 160 GKGGSYIKQIKEESGAYVQISQ--KSKDHALAERCITVIGELENNKKACHMILAKIVED 216
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 144/342 (42%), Gaps = 54/342 (15%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDD-TKDNR--DECVITVTAIESP 363
E +++L P + G +IGKGG IK I++ SGA + + +KD+ + C+ + +E+
Sbjct: 143 EKQVKILVPNSTAGMIIGKGGSYIKQIKEESGAYVQISQKSKDHALAERCITVIGELENN 202
Query: 364 DDIKSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCI--IGKSGSIINEIRKRTKAD 421
M + ++ ED + + + ++V G + +GS + +
Sbjct: 203 KKACHMILAKIV--------EDPQSGSCLHVSYAEVTGPVANFNPTGS---PYANPSSSL 251
Query: 422 VRISKGDKPKCADANDELVEVVGEV----GSVRDALVQIILRLRDDALKDRDGSRNPPV- 476
V G P A +L+E V V G A I + A GS +
Sbjct: 252 VPSFPGVAPAVAGNVAQLLENVKAVLRSNGYTEQATADIAAAMGTLASYGVLGSSLGALL 311
Query: 477 -GADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSP 535
G + +G G PL +G + + G+G G+ +++ +G G+ +G P
Sbjct: 312 AGMNGTLVAGGGNPPQPL--------QMGTNAQQAIGNGTGLPVNNNSFGLGT-GLGAIP 362
Query: 536 -YGSMSSYSSKLYGGLPPP-----------LTLEVLVPANAVGKVIGKAGSNLANIRKIS 583
G M S PPP + ++ V N VG ++G G +L I++ S
Sbjct: 363 GAGPMQCKSP------PPPGGAVAEKAGDAVKRDLEVGENIVGAILGPGGKSLVEIQRFS 416
Query: 584 GATIEMSD----SKSSRGDRVALISGTPEQKRAAENLIQAFI 621
GA I++S + +R +R+ I+G+P A+ LI+ I
Sbjct: 417 GAAIQISKKGIFAPGTR-NRIVTITGSPNAVSTAQYLIEQQI 457
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 547 YGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS---SRGDRVALI 603
+GG ++LVPA A G +IGK G +A ++K +GA ++MS S +RV LI
Sbjct: 43 HGGGNGTYHFKILVPAVAAGAIIGKGGETIALLQKEAGARVKMSKSNDFYPGTTERVCLI 102
Query: 604 SGTPE 608
+G+ E
Sbjct: 103 TGSVE 107
>gi|357507881|ref|XP_003624229.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355499244|gb|AES80447.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 275
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 88/177 (49%), Gaps = 11/177 (6%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKE 94
+ VI+RI+ P IG VIGK G I IR+ TRA +K+ D ++RV+ I S KD +
Sbjct: 98 QDVIFRIVVPSKQIGKVIGKEGCRIQKIREMTRANIKIADAIARHEERVIIISS--KDND 155
Query: 95 DVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANI 154
++ D E + L + +LK N+ +A+ ++L+ SQ+ +
Sbjct: 156 EMVTDAE----KALEQIANLILKED----NSSFDASKLTAGHVAANTIRLLIAGSQAGGL 207
Query: 155 IGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAI 211
IG +G I++LR+ + I V + P + A E D V +SG+ V KAL I
Sbjct: 208 IGMSGQNIEKLRNSSGAMITVLAP-SQLPLCASAHESDRVVQLSGDVSTVMKALEEI 263
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 96/175 (54%), Gaps = 17/175 (9%)
Query: 303 SQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIES 362
++ ++++ R++ P +IG+VIGK G I+ IR+ + A I + D +E VI +++ ++
Sbjct: 95 AKGQDVIFRIVVPSKQIGKVIGKEGCRIQKIREMTRANIKIADAIARHEERVIIISSKDN 154
Query: 363 PDDIKSMAVEAVLLLQTKINDEDDDTV-------------TIRLLVSSKVIGCIIGKSGS 409
D++ + A +A+ + I ED+ + TIRLL++ G +IG SG
Sbjct: 155 -DEMVTDAEKALEQIANLILKEDNSSFDASKLTAGHVAANTIRLLIAGSQAGGLIGMSGQ 213
Query: 410 IINEIRKRTKADVRI-SKGDKPKCADAN--DELVEVVGEVGSVRDALVQIILRLR 461
I ++R + A + + + P CA A+ D +V++ G+V +V AL +I +LR
Sbjct: 214 NIEKLRNSSGAMITVLAPSQLPLCASAHESDRVVQLSGDVSTVMKALEEIGCQLR 268
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 34/51 (66%)
Query: 554 LTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALIS 604
+ ++VP+ +GKVIGK G + IR+++ A I+++D+ + +RV +IS
Sbjct: 100 VIFRIVVPSKQIGKVIGKEGCRIQKIREMTRANIKIADAIARHEERVIIIS 150
>gi|426199945|gb|EKV49869.1| hypothetical protein AGABI2DRAFT_63586 [Agaricus bisporus var.
bisporus H97]
Length = 365
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 136/334 (40%), Gaps = 73/334 (21%)
Query: 305 SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPD 364
S + +R L +IGKGG + IR+ SGA++ V ++ E ++ V+ P
Sbjct: 61 SANIHMRCLIVTQDASIIIGKGGSHVNEIREKSGARVMVSESIPGNPERILNVSG---PL 117
Query: 365 DIKSMAVEAVLLLQTKINDEDDD--------TVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
D S +A L+ +INDE D VTI+ ++ + +G +IGK GS I EI+
Sbjct: 118 DAVS---KAFGLIVRRINDEPFDVPSVPGSRAVTIKFMIPNSRMGSVIGKGGSKIKEIQD 174
Query: 417 RTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQI--ILRLRDDALKDRDGSRNP 474
+ A + S+G P + + ++ V G ++ A I IL + + S
Sbjct: 175 ASGAKLNASEGMLP---GSTERVLSVAGVADAIHIATYYIGTILIEAQERMPSTSNSTYR 231
Query: 475 PVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDS 534
P + G G S P GY A
Sbjct: 232 PSSQPRRPTQGGGSSYVP-----------GYSHHA------------------------- 255
Query: 535 PYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS 594
PYG + +L T ++ +P + VG +IGK GS + IR +S + I++ + +
Sbjct: 256 PYGPPHNPPQQLQ-------TQQIYIPNDLVGCIIGKGGSKINEIRHMSASQIKIMEPGA 308
Query: 595 -----------SRGDRVALISGTPEQKRAAENLI 617
S G+R+ +I+G P + A L+
Sbjct: 309 TGLGPNGAPGGSEGERLVVITGQPANIQMAVQLL 342
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 90/210 (42%), Gaps = 47/210 (22%)
Query: 305 SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTK-DNRDECVITVTAIESP 363
S + I+ + P +++G VIGKGG IK I+ ASGA+++ + E V++V +
Sbjct: 144 SRAVTIKFMIPNSRMGSVIGKGGSKIKEIQDASGAKLNASEGMLPGSTERVLSVAGVADA 203
Query: 364 DDIKSMAVEAVLL-LQTKINDEDDDTV--------------------------------- 389
I + + +L+ Q ++ + T
Sbjct: 204 IHIATYYIGTILIEAQERMPSTSNSTYRPSSQPRRPTQGGGSSYVPGYSHHAPYGPPHNP 263
Query: 390 -----TIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRI----SKGDKPKCADANDE-- 438
T ++ + + ++GCIIGK GS INEIR + + ++I + G P A E
Sbjct: 264 PQQLQTQQIYIPNDLVGCIIGKGGSKINEIRHMSASQIKIMEPGATGLGPNGAPGGSEGE 323
Query: 439 -LVEVVGEVGSVRDALVQIILRLRDDALKD 467
LV + G+ +++ A+ + RL + K
Sbjct: 324 RLVVITGQPANIQMAVQLLYHRLEQEKQKQ 353
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 120/293 (40%), Gaps = 67/293 (22%)
Query: 51 VIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCA 110
+IGK G +N IR+++ ARV V + PG +R++ + PL A
Sbjct: 78 IIGKGGSHVNEIREKSGARVMVSESIPGNPERILNVSG------------------PLDA 119
Query: 111 AQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTR 170
A + I + + R + ++P+S+ ++IGK G+ IK ++ +
Sbjct: 120 VSKAFGLIVRRINDEPFDVPSVPGSRAVT--IKFMIPNSRMGSVIGKGGSKIKEIQDASG 177
Query: 171 TSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTV 230
+ +ASE + E + ++G ++A+ A + I I+ + R +T
Sbjct: 178 AKL-----NASEGMLPGSTE--RVLSVAGVADAIHIATYYIGTILIEAQERMPSTSNSTY 230
Query: 231 REAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTWPVYS 290
R P++ P P++ G++ VP GY+ P ++
Sbjct: 231 R---------------------PSSQPRRPTQGG----GSSYVP---GYSHHAPYGPPHN 262
Query: 291 TGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDV 343
L Q++++ I P + +G +IGKGG I IR S +QI +
Sbjct: 263 PPQQL--------QTQQIYI----PNDLVGCIIGKGGSKINEIRHMSASQIKI 303
>gi|409082121|gb|EKM82479.1| hypothetical protein AGABI1DRAFT_33710 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 365
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 136/334 (40%), Gaps = 73/334 (21%)
Query: 305 SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPD 364
S + +R L +IGKGG + IR+ SGA++ V ++ E ++ V+ P
Sbjct: 61 SANIHMRCLIVTQDASIIIGKGGSHVNEIREKSGARVMVSESIPGNPERILNVSG---PL 117
Query: 365 DIKSMAVEAVLLLQTKINDEDDD--------TVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
D S +A L+ +INDE D VTI+ ++ + +G +IGK GS I EI+
Sbjct: 118 DAVS---KAFGLIVRRINDEPFDVPSVPGSRAVTIKFMIPNSRMGSVIGKGGSKIKEIQD 174
Query: 417 RTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQI--ILRLRDDALKDRDGSRNP 474
+ A + S+G P + + ++ V G ++ A I IL + + S
Sbjct: 175 ASGAKLNASEGMLP---GSTERVLSVAGVADAIHIATYYIGTILIEAQERMPSTSNSTYR 231
Query: 475 PVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDS 534
P + G G S P GY A
Sbjct: 232 PSSQPRRPTQGGGSSYVP-----------GYSHHA------------------------- 255
Query: 535 PYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS 594
PYG + +L T ++ +P + VG +IGK GS + IR +S + I++ + +
Sbjct: 256 PYGPPHNPPQQLQ-------TQQIYIPNDLVGCIIGKGGSKINEIRHMSASQIKIMEPGA 308
Query: 595 -----------SRGDRVALISGTPEQKRAAENLI 617
S G+R+ +I+G P + A L+
Sbjct: 309 TGLGPNGAPGGSEGERLVVITGQPANIQMAVQLL 342
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 90/210 (42%), Gaps = 47/210 (22%)
Query: 305 SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTK-DNRDECVITVTAIESP 363
S + I+ + P +++G VIGKGG IK I+ ASGA+++ + E V++V +
Sbjct: 144 SRAVTIKFMIPNSRMGSVIGKGGSKIKEIQDASGAKLNASEGMLPGSTERVLSVAGVADA 203
Query: 364 DDIKSMAVEAVLL-LQTKINDEDDDTV--------------------------------- 389
I + + +L+ Q ++ + T
Sbjct: 204 IHIATYYIGTILIEAQERMPSTSNSTYRPSSQPRRPTQGGGSSYVPGYSHHAPYGPPHNP 263
Query: 390 -----TIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRI----SKGDKPKCADANDE-- 438
T ++ + + ++GCIIGK GS INEIR + + ++I + G P A E
Sbjct: 264 PQQLQTQQIYIPNDLVGCIIGKGGSKINEIRHMSASQIKIMEPGATGLGPNGAPGGSEGE 323
Query: 439 -LVEVVGEVGSVRDALVQIILRLRDDALKD 467
LV + G+ +++ A+ + RL + K
Sbjct: 324 RLVVITGQPANIQMAVQLLYHRLEQEKQKQ 353
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 120/293 (40%), Gaps = 67/293 (22%)
Query: 51 VIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCA 110
+IGK G +N IR+++ ARV V + PG +R++ + PL A
Sbjct: 78 IIGKGGSHVNEIREKSGARVMVSESIPGNPERILNVSG------------------PLDA 119
Query: 111 AQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTR 170
A + I + + R + ++P+S+ ++IGK G+ IK ++ +
Sbjct: 120 VSKAFGLIVRRINDEPFDVPSVPGSRAVT--IKFMIPNSRMGSVIGKGGSKIKEIQDASG 177
Query: 171 TSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTV 230
+ +ASE + E + ++G ++A+ A + I I+ + R +T
Sbjct: 178 AKL-----NASEGMLPGSTE--RVLSVAGVADAIHIATYYIGTILIEAQERMPSTSNSTY 230
Query: 231 REAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTWPVYS 290
R P++ P P++ G++ VP GY+ P ++
Sbjct: 231 R---------------------PSSQPRRPTQGG----GSSYVP---GYSHHAPYGPPHN 262
Query: 291 TGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDV 343
L Q++++ I P + +G +IGKGG I IR S +QI +
Sbjct: 263 PPQQL--------QTQQIYI----PNDLVGCIIGKGGSKINEIRHMSASQIKI 303
>gi|51472291|gb|AAU04539.1| neurological oncogenic ventral antigen protein [Danio rerio]
Length = 473
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 90/184 (48%), Gaps = 19/184 (10%)
Query: 297 SGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD-----NRD 351
S +VG + E ++VL P G +IGKGG TI +++ +GA I + +KD
Sbjct: 52 SDIVGFHEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTER 111
Query: 352 ECVI--TVTAIESPDDI----------KSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKV 399
C+I TV A+ + D + E V +LQ + D +L+V +
Sbjct: 112 VCLIQGTVEALNNVHDFIAEKVREMPQSAQKTEPVSILQPQTTVNPDRVKQAKLVVPNST 171
Query: 400 IGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILR 459
G IIGK G+ + + +++ A V++S+ KP + + +V + GE R A+ I+ +
Sbjct: 172 AGLIIGKGGATVKAVMEQSGAWVQLSQ--KPDGINLQERVVTISGEPEQNRKAVEIIVQK 229
Query: 460 LRDD 463
+++D
Sbjct: 230 IQED 233
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 83/187 (44%), Gaps = 35/187 (18%)
Query: 34 EESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV---DPFPGAKDRVVTIYSHV 90
E ++L P GS+IGK G+ I +++ET A +K+ D +PG +RV I V
Sbjct: 60 EGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTV 119
Query: 91 KDKEDV---------EVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEE 141
+ +V E+ EP+ Q T N + K +
Sbjct: 120 EALNNVHDFIAEKVREMPQSAQKTEPVSILQP--------------QTTVNPDRVK---Q 162
Query: 142 CQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGES 201
+++VP+S + IIGK GAT+K + ++ ++++ K P E V ISGE
Sbjct: 163 AKLVVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQK----PDGINLQE--RVVTISGEP 216
Query: 202 EAVKKAL 208
E +KA+
Sbjct: 217 EQNRKAV 223
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 41/69 (59%), Gaps = 7/69 (10%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS---SRGDRVALISGTPEQKRA 612
L+VL+P+ A G +IGK G + ++K +GATI++S SK +RV LI GT E
Sbjct: 65 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVE---- 120
Query: 613 AENLIQAFI 621
A N + FI
Sbjct: 121 ALNNVHDFI 129
>gi|355560757|gb|EHH17443.1| hypothetical protein EGK_13854 [Macaca mulatta]
gi|355747773|gb|EHH52270.1| hypothetical protein EGM_12689 [Macaca fascicularis]
Length = 583
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 147/322 (45%), Gaps = 39/322 (12%)
Query: 298 GLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITV 357
G V + +L +R+L P +G +IGK G TI++I + + ++IDV K+N ++
Sbjct: 186 GSVSKQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDV-HRKENAGAAEKSI 244
Query: 358 TAIESPDDIKSMAVEAVLLLQTKIND-EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
T + +P+ + + ++ + D + + + +++L + +G +IGK G + +I +
Sbjct: 245 TILSTPEGTSAACKSILEIMHKEAQDIKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQ 304
Query: 417 RTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPV 476
T + IS + + + + V G V + A +I+ ++R+ D S N +
Sbjct: 305 DTDTKITISPLQELTLYNP-ERTITVKGNVETCAKAEEEIMKKIRESYEND-IASMN--L 360
Query: 477 GADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPY 536
A I G ++ L PP GM +S G S PY
Sbjct: 361 QAHLI--PGLNLNA---LGLFPPTS--------------GMPPPTS----GPPSAMTPPY 397
Query: 537 GSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSR 596
++ T+ + +PA +VG +IGK G ++ + + +GA+I+++ +++
Sbjct: 398 PQFEQSETE---------TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPD 448
Query: 597 GD-RVALISGTPEQKRAAENLI 617
R+ +I+G PE + A+ I
Sbjct: 449 AKVRMVIITGPPEAQFKAQGRI 470
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 91/425 (21%), Positives = 169/425 (39%), Gaps = 78/425 (18%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKEDVEV 98
R+L P +G++IGK G I +I ++T++++ V GA ++ +TI S
Sbjct: 199 RLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILS---------- 248
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
E AA ++L++ + D K E+ +IL ++ +IGK
Sbjct: 249 -----TPEGTSAACKSILEI--------MHKEAQDIKFTEEIPLKILAHNNFVGRLIGKE 295
Query: 159 GATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKF 218
G +K++ T T I ++P + + + G E KA IM K
Sbjct: 296 GRNLKKIEQDTDTKITISPLQ-----ELTLYNPERTITVKGNVETCAKAE---EEIMKK- 346
Query: 219 SPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQG 278
+RE+ + I ++ + GL NA + P S
Sbjct: 347 -----------IRESYENDIASMNLQAHLIPGLNLNALGLFPPTS--------------- 380
Query: 279 YADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASG 338
G P ++ QSE + + P +G +IGK G IK + + +G
Sbjct: 381 ----GMPPPTSGPPSAMTPPYPQFEQSETETVHLFIPALSVGAIIGKQGQHIKQLSRFAG 436
Query: 339 AQIDV--DDTKDNRDECVITVTAIESPDDIKSMA---VEAVLLLQTKINDEDDDTVTIRL 393
A I + + D + VI I P + + A + + + ++ +++ + +
Sbjct: 437 ASIKIAPAEAPDAKVRMVI----ITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHI 492
Query: 394 LVSSKVIGCIIGKSGSI--INEIRKRTKADVRISKGDKPKCADANDE-LVEVVGEVGSVR 450
V S G +IGK G +NE++ + A+V + + P D ND+ +V++ G + +
Sbjct: 493 RVPSFAAGRVIGKGGKTAKVNELQNLSSAEVVVPRDQTP---DENDQVVVKITGHFYACQ 549
Query: 451 DALVQ 455
+ Q
Sbjct: 550 AKVAQ 554
>gi|402587695|gb|EJW81630.1| KH domain-containing protein [Wuchereria bancrofti]
Length = 273
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 132/281 (46%), Gaps = 32/281 (11%)
Query: 354 VITVTAIESPDDIKSMAVEAVLLLQTKINDEDDDTVT--------IRLLVSSKVIGCIIG 405
V+T+TA + ++I + E + L +D+ D + +++LV G +IG
Sbjct: 5 VLTLTA--TTENIANCLREIIPRLDENRDDDHDRRMKKTDRCDSEMKVLVHESHAGAVIG 62
Query: 406 KSGSIINEIRKRTKADVRISKGDKPKCA-DANDELVEVVGEVGSVRDALVQIILRLRDDA 464
+ GS I E+R++T A +++ +CA + + +V + GEV + D + II L++
Sbjct: 63 RGGSRIKELREKTGAQLKVFS----RCAPQSTERIVLLNGEVEKIIDCINIIIDVLKEIP 118
Query: 465 LKDRDGSRNPPVGADHIYSSGTGIS-MPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSL 523
+K P D +Y IS +P + +G + D G G++ S
Sbjct: 119 IK------GPVRPYDPMYYDPDIISDYGGYVPDRNFISRVGRGR--DFGFSSGIIPSR-- 168
Query: 524 YGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKIS 583
D YG M + Y +P T +V +P G +IGK GS + +R+ S
Sbjct: 169 -----YPGRDDRYGGMRDMMGR-YSPIPAMQTTQVTIPDELGGAIIGKGGSRINRVREES 222
Query: 584 GATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFIMAT 624
GA IE+ + + GDR+ ISGT EQ +AA+ L+Q + +
Sbjct: 223 GAQIEVEPHRDNGGDRIITISGTREQIQAAQYLLQQCVRTS 263
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 115/241 (47%), Gaps = 41/241 (17%)
Query: 131 DNDKKRKEKEEC----QILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHS 186
D+D++ K+ + C ++LV S + +IG+ G+ IK LR KT +KV + A + T
Sbjct: 33 DHDRRMKKTDRCDSEMKVLVHESHAGAVIGRGGSRIKELREKTGAQLKVFSRCAPQST-- 90
Query: 187 CAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIY 246
+ VL++GE E + + I ++ ++IP++ VR P P + Y
Sbjct: 91 -----ERIVLLNGEVEKIIDCINIIIDVL------KEIPIKGPVRPYDPMYYDPDIISDY 139
Query: 247 PPGGLYPNADPILPSRSVPSILGAARVPDLQGYAD--TGNTWPVYSTGLSLVSGLVG--- 301
GG +P R+ S +G R D G++ + +P + ++G
Sbjct: 140 --GGY-------VPDRNFISRVGRGR--DF-GFSSGIIPSRYPGRDDRYGGMRDMMGRYS 187
Query: 302 ---ASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
A Q+ ++ I P G +IGKGG I +R+ SGAQI+V+ +DN + +IT++
Sbjct: 188 PIPAMQTTQVTI----PDELGGAIIGKGGSRINRVREESGAQIEVEPHRDNGGDRIITIS 243
Query: 359 A 359
Sbjct: 244 G 244
>gi|402083824|gb|EJT78842.1| hypothetical protein GGTG_03937 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 373
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 145/337 (43%), Gaps = 52/337 (15%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
+L +R + + G +IGKGG + +R +G + V + V+T+T D I
Sbjct: 45 QLTVRAIVSSKEAGVIIGKGGKNVADLRDETGVRAGVSKVVQGVHDRVLTITG--GCDAI 102
Query: 367 -KSMAVEAVLLLQTKIN------DEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
K+ A+ A LL+ + + T I+LL+S +G IIG+ G I I+ +
Sbjct: 103 SKAYAIVARALLEGAPTLGMGGVVQSNGTHPIKLLISHNQMGTIIGREGLKIKHIQDVSG 162
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRD------GSRN 473
+ K P+ +N+ +VEV G ++ A+ +I L DD + R
Sbjct: 163 VRMVAQKDMLPQ---SNERVVEVQGTPEGIQRAVWEICKCLIDDWQRATGTVLYNPAVRT 219
Query: 474 PPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGS-LSMG 532
P GA PPL P G R D GS + + G G+ S G
Sbjct: 220 QPGGA------------PPLTTGGPGYNSTG--ARGDYGSSPRVTRT----GNGADFSNG 261
Query: 533 DSP--YGSMSSYSSKLYGGLPPPL---------TLEVLVPANAVGKVIGKAGSNLANIRK 581
+P Y S + G PP T + +PAN VG +IG+AGS ++ IRK
Sbjct: 262 STPRLYNRRSDSDAANRG---PPTHDENGEEIQTQNISIPANMVGCIIGRAGSKISEIRK 318
Query: 582 ISGATIEMSDS-KSSRGDRVALISGTPEQKRAAENLI 617
SGA I ++ + G+R+ I G+ + +A L+
Sbjct: 319 ASGARISIAKAPHDETGERMFTIMGSAKANESALFLL 355
Score = 46.2 bits (108), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 124/328 (37%), Gaps = 52/328 (15%)
Query: 29 DEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYS 88
DE+ + + R + G +IGK GK + +R ET R V G DRV+TI
Sbjct: 38 DEEYAQAQLTVRAIVSSKEAGVIIGKGGKNVADLRDETGVRAGVSKVVQGVHDRVLTI-- 95
Query: 89 HVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDK-----KRKEKEECQ 143
DA+ K +A +A A+ + +
Sbjct: 96 --------------------TGGCDAISKAYAIVARALLEGAPTLGMGGVVQSNGTHPIK 135
Query: 144 ILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEA 203
+L+ +Q IIG+ G IK ++ + + V KD ++ + V + G E
Sbjct: 136 LLISHNQMGTIIGREGLKIKHIQDVSGVRM-VAQKDMLPQSN------ERVVEVQGTPEG 188
Query: 204 VKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRS 263
+++A++ I + R TV P P P GG P S
Sbjct: 189 IQRAVWEICKCLIDDWQR----ATGTVLYNPAVRTQPGGAPPLTTGG------PGYNSTG 238
Query: 264 VPSILGAA-RVPDLQGYAD--TGNTWPVYSTGLSLVSGLVGA----SQSEELVIR-VLCP 315
G++ RV AD G+T +Y+ + G EE+ + + P
Sbjct: 239 ARGDYGSSPRVTRTGNGADFSNGSTPRLYNRRSDSDAANRGPPTHDENGEEIQTQNISIP 298
Query: 316 FNKIGRVIGKGGGTIKSIRQASGAQIDV 343
N +G +IG+ G I IR+ASGA+I +
Sbjct: 299 ANMVGCIIGRAGSKISEIRKASGARISI 326
>gi|119614192|gb|EAW93786.1| insulin-like growth factor 2 mRNA binding protein 3, isoform CRA_a
[Homo sapiens]
Length = 422
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 147/322 (45%), Gaps = 39/322 (12%)
Query: 298 GLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITV 357
G V + +L +R+L P +G +IGK G TI++I + + ++IDV K+N ++
Sbjct: 29 GSVSKQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHR-KENAGAAEKSI 87
Query: 358 TAIESPDDIKSMAVEAVLLLQTKIND-EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
T + +P+ + + ++ + D + + + +++L + +G +IGK G + +I +
Sbjct: 88 TILSTPEGTSAACKSILEIMHKEAQDIKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQ 147
Query: 417 RTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPV 476
T + IS + + + + V G V + A +I+ ++R+ D S N +
Sbjct: 148 DTDTKITISPLQELTLYNP-ERTITVKGNVETCAKAEEEIMKKIRESYEND-IASMN--L 203
Query: 477 GADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPY 536
A I G ++ L PP GM +S G S PY
Sbjct: 204 QAHLI--PGLNLNA---LGLFPPTS--------------GMPPPTS----GPPSAMTPPY 240
Query: 537 GSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSR 596
++ T+ + +PA +VG +IGK G ++ + + +GA+I+++ +++
Sbjct: 241 PQFEQSETE---------TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPD 291
Query: 597 GD-RVALISGTPEQKRAAENLI 617
R+ +I+G PE + A+ I
Sbjct: 292 AKVRMVIITGPPEAQFKAQGRI 313
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 94/441 (21%), Positives = 176/441 (39%), Gaps = 83/441 (18%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKEDVEV 98
R+L P +G++IGK G I +I ++T++++ V GA ++ +TI S
Sbjct: 42 RLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILS---------- 91
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
E AA ++L++ + D K E+ +IL ++ +IGK
Sbjct: 92 -----TPEGTSAACKSILEI--------MHKEAQDIKFTEEIPLKILAHNNFVGRLIGKE 138
Query: 159 GATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKF 218
G +K++ T T I ++P + + + G E KA IM K
Sbjct: 139 GRNLKKIEQDTDTKITISPLQ-----ELTLYNPERTITVKGNVETCAKAE---EEIMKK- 189
Query: 219 SPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQG 278
+RE+ + I ++ + GL NA + P S
Sbjct: 190 -----------IRESYENDIASMNLQAHLIPGLNLNALGLFPPTS--------------- 223
Query: 279 YADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASG 338
G P ++ QSE + + P +G +IGK G IK + + +G
Sbjct: 224 ----GMPPPTSGPPSAMTPPYPQFEQSETETVHLFIPALSVGAIIGKQGQHIKQLSRFAG 279
Query: 339 AQIDV--DDTKDNRDECVITVTAIESPDDIKSMA---VEAVLLLQTKINDEDDDTVTIRL 393
A I + + D + VI I P + + A + + + ++ +++ + +
Sbjct: 280 ASIKIAPAEAPDAKVRMVI----ITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHI 335
Query: 394 LVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDE-LVEVVGEVGS---- 448
V S G +IGK G +NE++ + A+V + + P D ND+ +V++ G +
Sbjct: 336 RVPSFAAGRVIGKGGKTVNELQNLSSAEVVVPRDQTP---DENDQVVVKITGHFYACQVA 392
Query: 449 ---VRDALVQIILRLRDDALK 466
+++ L Q+ + AL+
Sbjct: 393 QRKIQEILTQVKQHQQQKALQ 413
>gi|109067156|ref|XP_001098422.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 3
isoform 3 [Macaca mulatta]
gi|402863939|ref|XP_003896249.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
[Papio anubis]
Length = 579
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 147/322 (45%), Gaps = 39/322 (12%)
Query: 298 GLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITV 357
G V + +L +R+L P +G +IGK G TI++I + + ++IDV K+N ++
Sbjct: 186 GSVSKQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDV-HRKENAGAAEKSI 244
Query: 358 TAIESPDDIKSMAVEAVLLLQTKIND-EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
T + +P+ + + ++ + D + + + +++L + +G +IGK G + +I +
Sbjct: 245 TILSTPEGTSAACKSILEIMHKEAQDIKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQ 304
Query: 417 RTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPV 476
T + IS + + + + V G V + A +I+ ++R+ D S N +
Sbjct: 305 DTDTKITISPLQELTLYNP-ERTITVKGNVETCAKAEEEIMKKIRESYEND-IASMN--L 360
Query: 477 GADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPY 536
A I G ++ L PP GM +S G S PY
Sbjct: 361 QAHLI--PGLNLNA---LGLFPPTS--------------GMPPPTS----GPPSAMTPPY 397
Query: 537 GSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSR 596
++ T+ + +PA +VG +IGK G ++ + + +GA+I+++ +++
Sbjct: 398 PQFEQSETE---------TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPD 448
Query: 597 GD-RVALISGTPEQKRAAENLI 617
R+ +I+G PE + A+ I
Sbjct: 449 AKVRMVIITGPPEAQFKAQGRI 470
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 95/441 (21%), Positives = 176/441 (39%), Gaps = 83/441 (18%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKEDVEV 98
R+L P +G++IGK G I +I ++T++++ V GA ++ +TI S
Sbjct: 199 RLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILS---------- 248
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
E AA ++L++ A D K E+ +IL ++ +IGK
Sbjct: 249 -----TPEGTSAACKSILEIMHKEAQ--------DIKFTEEIPLKILAHNNFVGRLIGKE 295
Query: 159 GATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKF 218
G +K++ T T I ++P + + + G E KA IM K
Sbjct: 296 GRNLKKIEQDTDTKITISPLQ-----ELTLYNPERTITVKGNVETCAKAE---EEIMKK- 346
Query: 219 SPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQG 278
+RE+ + I ++ + GL NA + P S
Sbjct: 347 -----------IRESYENDIASMNLQAHLIPGLNLNALGLFPPTS--------------- 380
Query: 279 YADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASG 338
G P ++ QSE + + P +G +IGK G IK + + +G
Sbjct: 381 ----GMPPPTSGPPSAMTPPYPQFEQSETETVHLFIPALSVGAIIGKQGQHIKQLSRFAG 436
Query: 339 AQIDV--DDTKDNRDECVITVTAIESPDDIKSMA---VEAVLLLQTKINDEDDDTVTIRL 393
A I + + D + VI I P + + A + + + ++ +++ + +
Sbjct: 437 ASIKIAPAEAPDAKVRMVI----ITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHI 492
Query: 394 LVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDE-LVEVVGEVGS---- 448
V S G +IGK G +NE++ + A+V + + P D ND+ +V++ G +
Sbjct: 493 RVPSFAAGRVIGKGGKTVNELQNLSSAEVVVPRDQTP---DENDQVVVKITGHFYACQVA 549
Query: 449 ---VRDALVQIILRLRDDALK 466
+++ L Q+ + AL+
Sbjct: 550 QRKIQEILTQVKQHQQQKALQ 570
>gi|344271275|ref|XP_003407465.1| PREDICTED: LOW QUALITY PROTEIN: far upstream element-binding
protein 3-like [Loxodonta africana]
Length = 625
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 139/341 (40%), Gaps = 42/341 (12%)
Query: 315 PFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDE--CVITVT--AIESPDDIKSMA 370
P +G +IG+GG I I+ SG +I + E CV+T T +IE +
Sbjct: 85 PDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPESIEQAKRLLGQI 144
Query: 371 VEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKAD-VRISKGDK 429
V+ ND D ++ +L+ + +G +IGK G I ++++RT V I G
Sbjct: 145 VDRCRNGPGFHNDIDGNSTIQEILIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPL 204
Query: 430 PKCADANDELVEVVGEVGSVRDALVQIILRLRDDA--------LKDRDG----------- 470
P AD + +V R+ +++II R +D A R G
Sbjct: 205 PXGADKPLRITGDPFKVQQAREMVLEII-REKDQADFRGVRSDFSSRMGGGSIEVSVPRF 263
Query: 471 ------SRNPPVGADHIYSSGTGISMPP---LLP--SIPPVGPLGYDQRADSGSGIGMLS 519
RN + +G I P + P + +GP Q A +L+
Sbjct: 264 AVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPERAAQVMGPPDRCQHAAHFINELILT 323
Query: 520 SSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANI 579
+ G+G LS+ +S GG+ + VPA+ G VIGK G N+ +I
Sbjct: 324 AQERDGFGGLSVARGRGRGRGDWSVGTPGGV---QEITYTVPADKCGLVIGKGGENIKSI 380
Query: 580 RKISGATIEMSDSKSSRGD---RVALISGTPEQKRAAENLI 617
+ SGA +E+ + D R+ I G P+Q A +LI
Sbjct: 381 NQQSGAHVELQRNPPPNTDPNLRIFTIRGVPQQIEVARHLI 421
Score = 43.1 bits (100), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 537 GSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSR 596
G S +SS++ GG ++EV VP AVG VIG+ G + I+ +G I+
Sbjct: 242 GVRSDFSSRMGGG-----SIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGIS 296
Query: 597 GDRVALISGTPEQKRAAENLIQAFIM 622
+R A + G P++ + A + I I+
Sbjct: 297 PERAAQVMGPPDRCQHAAHFINELIL 322
Score = 42.0 bits (97), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%)
Query: 554 LTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAA 613
+T E VP VG +IG+ G ++ I+ SG I+++ S +R +++GTPE A
Sbjct: 78 ITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPESIEQA 137
Query: 614 ENLI 617
+ L+
Sbjct: 138 KRLL 141
>gi|73976022|ref|XP_863341.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 3
isoform 7 [Canis lupus familiaris]
Length = 580
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 147/322 (45%), Gaps = 38/322 (11%)
Query: 298 GLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITV 357
G V + +L +R+L P +G +IGK G TI++I + + ++IDV K+N ++
Sbjct: 186 GSVSKQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVH-RKENAGAAEKSI 244
Query: 358 TAIESPDDIKSMAVEAVLLLQTKIND-EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
T + +P+ + + ++ + D + + + +++L + +G +IGK G + +I +
Sbjct: 245 TILSTPEGTSAACKSILEIMHKEAQDIKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQ 304
Query: 417 RTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPV 476
T + IS + + + + V G V + A +I+ ++R+ D S N +
Sbjct: 305 DTDTKITISPLQELTLYNP-ERTITVKGNVETCAKAEEEIMKKIRESYEND-IASMN--L 360
Query: 477 GADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPY 536
A I G ++ L PP GM +S G S PY
Sbjct: 361 QAHLI--PGLNLNA---LGLFPPTS--------------GMPPPTS----GPPSAMTPPY 397
Query: 537 GSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSR 596
+ P T+ + +PA +VG +IGK G ++ + + +GA+I+++ +++
Sbjct: 398 PQ--------FEQAPQTETVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPD 449
Query: 597 GD-RVALISGTPEQKRAAENLI 617
R+ +I+G PE + A+ I
Sbjct: 450 AKVRMVIITGPPEAQFKAQGRI 471
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 98/448 (21%), Positives = 182/448 (40%), Gaps = 96/448 (21%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKEDVEV 98
R+L P +G++IGK G I +I ++T++++ V GA ++ +TI S
Sbjct: 199 RLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILS---------- 248
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
E AA ++L++ A D K E+ +IL ++ +IGK
Sbjct: 249 -----TPEGTSAACKSILEIMHKEAQ--------DIKFTEEIPLKILAHNNFVGRLIGKE 295
Query: 159 GATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKF 218
G +K++ T T I ++P + + + G E KA IM K
Sbjct: 296 GRNLKKIEQDTDTKITISPLQ-----ELTLYNPERTITVKGNVETCAKAE---EEIMKK- 346
Query: 219 SPREDIPLETTVREAPPSIIIPSDVPIYP-PG------GLYPNADPILPSRSVPSILGAA 271
+RE+ + I ++ + PG GL+P + P S P +A
Sbjct: 347 -----------IRESYENDIASMNLQAHLIPGLNLNALGLFPPTSGMPPPTSGPP---SA 392
Query: 272 RVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIK 331
P +P + A Q+E + + P +G +IGK G IK
Sbjct: 393 MTPP----------YPQFEQ----------APQTE--TVHLFIPALSVGAIIGKQGQHIK 430
Query: 332 SIRQASGAQIDVD--DTKDNRDECVITVTAIESPDDIKSMA---VEAVLLLQTKINDEDD 386
+ + +GA I + + D + VI I P + + A + + + ++ +++
Sbjct: 431 QLSRFAGASIKIAPAEAPDAKVRMVI----ITGPPEAQFKAQGRIYGKIKEENFVSPKEE 486
Query: 387 DTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDE-LVEVVGE 445
+ + V S G +IGK G +NE++ + A+V + + P D ND+ +V++ G
Sbjct: 487 VKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEVVVPRDQTP---DENDQVVVKITGH 543
Query: 446 VGS-------VRDALVQIILRLRDDALK 466
+ +++ L Q+ + AL+
Sbjct: 544 FYACQVAQRKIQEILTQVKQHQQQKALQ 571
>gi|359320464|ref|XP_849868.3| PREDICTED: far upstream element-binding protein 3 isoform 1 [Canis
lupus familiaris]
Length = 554
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 140/341 (41%), Gaps = 42/341 (12%)
Query: 315 PFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDE--CVITVT--AIESPDDIKSMA 370
P +G +IG+GG I I+ SG +I + E CV+T T +IE +
Sbjct: 85 PDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPESIEQAKRLLGQI 144
Query: 371 VEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKAD-VRISKGDK 429
V+ ND D ++ +L+ + +G +IGK G I ++++RT V I G
Sbjct: 145 VDRCRNGPGFHNDIDGNSTIQEILIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPL 204
Query: 430 PKCADANDELVEVVGEVGSVRDALVQIILRLRDDA-LKDRDGSRNPPVGADHIYSS---- 484
P AD + +V R+ +++II R +D A + G + VG I S
Sbjct: 205 PTGADKPLRITGDPFKVQQAREMVLEII-REKDQADFRGVRGDFSARVGGGSIEVSVPRF 263
Query: 485 --------------------GTGISMPP---LLP--SIPPVGPLGYDQRADSGSGIGMLS 519
G I P + P + +GP Q A +L+
Sbjct: 264 AVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPERAAQVMGPPDRCQHAAHVINELILT 323
Query: 520 SSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANI 579
+ G+G L++ +S GG+ + VPA+ G VIGK G N+ +I
Sbjct: 324 AQERDGFGGLTVARGRGRGRGDWSVGAPGGV---QEITYTVPADKCGLVIGKGGDNIKSI 380
Query: 580 RKISGATIEMSDSKSSRGD---RVALISGTPEQKRAAENLI 617
+ SGA +E+ + D R+ I G P+Q A +LI
Sbjct: 381 NQQSGAHVELQRNPPPNTDPNLRIFTIRGIPQQIEVARHLI 421
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%)
Query: 554 LTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAA 613
+T E VP VG +IG+ G ++ I+ SG I+++ S +R +++GTPE A
Sbjct: 78 ITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPESIEQA 137
Query: 614 ENLI 617
+ L+
Sbjct: 138 KRLL 141
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 74/164 (45%), Gaps = 24/164 (14%)
Query: 44 PDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFN 103
PD ++G +IG+ G+ I+ I+ E+ ++++ G +R +
Sbjct: 85 PDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLT---------------G 129
Query: 104 DKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIK 163
E + A+ L ++ N D D +E IL+P+S+ +IGK G TIK
Sbjct: 130 TPESIEQAKRLLGQIVDRCRNGPGFHNDIDGNSTIQE---ILIPASKVGLVIGKGGETIK 186
Query: 164 RLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKA 207
+L+ +T + V +D PT + D + I+G+ V++A
Sbjct: 187 QLQERTGVKM-VMIQDGPLPTGA-----DKPLRITGDPFKVQQA 224
Score = 40.0 bits (92), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 537 GSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSR 596
G +S+++ GG ++EV VP AVG VIG+ G + I+ +G I+
Sbjct: 242 GVRGDFSARVGGG-----SIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGIS 296
Query: 597 GDRVALISGTPEQKRAAENLIQAFIM 622
+R A + G P++ + A ++I I+
Sbjct: 297 PERAAQVMGPPDRCQHAAHVINELIL 322
>gi|403287927|ref|XP_003935171.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
[Saimiri boliviensis boliviensis]
Length = 579
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 144/313 (46%), Gaps = 39/313 (12%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
+L +R+L P +G +IGK G TI++I + + ++IDV K+N ++T + +P+
Sbjct: 195 DLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDV-HRKENAGAAEKSITILSTPEGT 253
Query: 367 KSMAVEAVLLLQTKIND-EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRIS 425
+ + ++ + D + + + +++L + +G +IGK G + +I + T + IS
Sbjct: 254 SAACKSILEIMHKEAQDIKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITIS 313
Query: 426 KGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSG 485
+ + + + V G V + A +I+ ++R+ D S N + A I G
Sbjct: 314 PLQELTLYNP-ERTITVKGNVETCAKAEEEIMKKIRESYEND-IASMN--LQAHLI--PG 367
Query: 486 TGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSK 545
++ L PP GM +S G S PY ++
Sbjct: 368 LNLNA---LGLFPPTS--------------GMPPPTS----GPPSAMTPPYPQFEQSETE 406
Query: 546 LYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGD-RVALIS 604
T+ + +PA +VG +IGK G ++ + + +GA+I+++ +++ R+ +I+
Sbjct: 407 ---------TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIIT 457
Query: 605 GTPEQKRAAENLI 617
G PE + A+ I
Sbjct: 458 GPPEAQFKAQGRI 470
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 89/407 (21%), Positives = 162/407 (39%), Gaps = 75/407 (18%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKEDVEV 98
R+L P +G++IGK G I +I ++T++++ V GA ++ +TI S
Sbjct: 199 RLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILS---------- 248
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
E AA ++L++ + D K E+ +IL ++ +IGK
Sbjct: 249 -----TPEGTSAACKSILEI--------MHKEAQDIKFTEEIPLKILAHNNFVGRLIGKE 295
Query: 159 GATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKF 218
G +K++ T T I ++P + + + G E KA IM K
Sbjct: 296 GRNLKKIEQDTDTKITISPLQ-----ELTLYNPERTITVKGNVETCAKAE---EEIMKK- 346
Query: 219 SPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQG 278
+RE+ + I ++ + GL NA + P S
Sbjct: 347 -----------IRESYENDIASMNLQAHLIPGLNLNALGLFPPTS--------------- 380
Query: 279 YADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASG 338
G P ++ QSE + + P +G +IGK G IK + + +G
Sbjct: 381 ----GMPPPTSGPPSAMTPPYPQFEQSETETVHLFIPALSVGAIIGKQGQHIKQLSRFAG 436
Query: 339 AQIDV--DDTKDNRDECVITVTAIESPDDIKSMA---VEAVLLLQTKINDEDDDTVTIRL 393
A I + + D + VI I P + + A + + + ++ +++ + +
Sbjct: 437 ASIKIAPAEAPDAKVRMVI----ITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHI 492
Query: 394 LVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELV 440
V S G +IGK G +NE++ + A+V + + P D ND++V
Sbjct: 493 RVPSFAAGRVIGKGGKTVNELQNLSSAEVVVPRDQTP---DENDQVV 536
>gi|395830897|ref|XP_003788549.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
[Otolemur garnettii]
Length = 579
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 147/322 (45%), Gaps = 39/322 (12%)
Query: 298 GLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITV 357
G V + +L +R+L P +G +IGK G TI++I + + ++IDV K+N ++
Sbjct: 186 GSVSKQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDV-HRKENAGAAEKSI 244
Query: 358 TAIESPDDIKSMAVEAVLLLQTKIND-EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
T + +P+ + + ++ + D + + + +++L + +G +IGK G + +I +
Sbjct: 245 TILSTPEGTSAACKSILEIMHKEAQDIKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQ 304
Query: 417 RTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPV 476
T + IS + + + + V G V + A +I+ ++R+ D S N +
Sbjct: 305 DTDTKITISPLQELTLYNP-ERTITVKGNVETCAKAEEEIMKKIRESYEND-IASMN--L 360
Query: 477 GADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPY 536
A I G ++ L PP GM +S G S PY
Sbjct: 361 QAHLI--PGLNLNA---LGLFPPTS--------------GMPPPTS----GPPSAMTPPY 397
Query: 537 GSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSR 596
++ T+ + +PA +VG +IGK G ++ + + +GA+I+++ +++
Sbjct: 398 PQFEQSETE---------TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPD 448
Query: 597 GD-RVALISGTPEQKRAAENLI 617
R+ +I+G PE + A+ I
Sbjct: 449 AKVRMVIITGPPEAQFKAQGRI 470
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 95/441 (21%), Positives = 176/441 (39%), Gaps = 83/441 (18%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKEDVEV 98
R+L P +G++IGK G I +I ++T++++ V GA ++ +TI S
Sbjct: 199 RLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILS---------- 248
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
E AA ++L++ A D K E+ +IL ++ +IGK
Sbjct: 249 -----TPEGTSAACKSILEIMHKEAQ--------DIKFTEEIPLKILAHNNFVGRLIGKE 295
Query: 159 GATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKF 218
G +K++ T T I ++P + + + G E KA IM K
Sbjct: 296 GRNLKKIEQDTDTKITISPLQ-----ELTLYNPERTITVKGNVETCAKAE---EEIMKK- 346
Query: 219 SPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQG 278
+RE+ + I ++ + GL NA + P S
Sbjct: 347 -----------IRESYENDIASMNLQAHLIPGLNLNALGLFPPTS--------------- 380
Query: 279 YADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASG 338
G P ++ QSE + + P +G +IGK G IK + + +G
Sbjct: 381 ----GMPPPTSGPPSAMTPPYPQFEQSETETVHLFIPALSVGAIIGKQGQHIKQLSRFAG 436
Query: 339 AQIDV--DDTKDNRDECVITVTAIESPDDIKSMA---VEAVLLLQTKINDEDDDTVTIRL 393
A I + + D + VI I P + + A + + + ++ +++ + +
Sbjct: 437 ASIKIAPAEAPDAKVRMVI----ITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHI 492
Query: 394 LVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDE-LVEVVGEVGS---- 448
V S G +IGK G +NE++ + A+V + + P D ND+ +V++ G +
Sbjct: 493 RVPSFAAGRVIGKGGKTVNELQNLSSAEVVVPRDQTP---DENDQVVVKITGHFYACQVA 549
Query: 449 ---VRDALVQIILRLRDDALK 466
+++ L Q+ + AL+
Sbjct: 550 QRKIQEILTQVKQHQQQKALQ 570
>gi|115496720|ref|NP_001070027.1| insulin-like growth factor 2 mRNA-binding protein 1 [Danio rerio]
gi|123908308|sp|Q08CK7.1|IF2B1_DANRE RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 1;
Short=IGF2 mRNA-binding protein 1; Short=IMP-1; AltName:
Full=IGF-II mRNA-binding protein 1; AltName: Full=VICKZ
family member 1
gi|115313169|gb|AAI24197.1| Insulin-like growth factor 2 mRNA binding protein 1 [Danio rerio]
gi|182891894|gb|AAI65463.1| Igf2bp1 protein [Danio rerio]
Length = 598
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 153/336 (45%), Gaps = 52/336 (15%)
Query: 290 STGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDN 349
S +S SG+ Q ++ +R+L P +G +IGK G TI++I + + ++IDV K+N
Sbjct: 181 SRQMSPGSGIPSKHQHADIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDV-HRKEN 239
Query: 350 RDECVITVTAIESPDDIKSMAVEAVLLLQTKINDEDDDTVT-----IRLLVSSKVIGCII 404
++ +P+ S A +L + +N E DT T +++L + +G +I
Sbjct: 240 AGAAEKPISIHSTPEGC-SAACRMILEI---MNQEAKDTKTADEVPLKVLAHNNFVGRLI 295
Query: 405 GKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDA 464
GK G + ++ + T + IS + + + V G + + A +I+ ++R +A
Sbjct: 296 GKEGRNLKKVEQDTDTKITISPLQDLTLYNP-ERTITVKGSIEACCLAEQEIMKKVR-EA 353
Query: 465 LKDRDGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLY 524
+ + N L+P + LG IG+ SS
Sbjct: 354 YDNDIAAMN---------------QQTHLIPGL----NLG---------AIGLFPPSSAM 385
Query: 525 GYGSL--SMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKI 582
+L S+ PYG M + + T+ V +PA AVG +IGK G ++ + +
Sbjct: 386 PPPALGNSVPGPPYGPMGASEQE---------TVHVYIPAQAVGALIGKKGQHIKQLSRF 436
Query: 583 SGATIEMSDSKSSRGD-RVALISGTPEQKRAAENLI 617
+GA+I+++ +++ R+ +++G PE + A+ I
Sbjct: 437 AGASIKIAPAEAPDSKMRMVIVTGPPEAQFKAQGRI 472
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 95/430 (22%), Positives = 179/430 (41%), Gaps = 82/430 (19%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKEDVEV 98
R+L P +G++IGK G I +I ++T++++ V GA ++ ++I+S
Sbjct: 202 RLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKPISIHS---------- 251
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
E AA +L++ N D K ++ ++L ++ +IGK
Sbjct: 252 -----TPEGCSAACRMILEI--------MNQEAKDTKTADEVPLKVLAHNNFVGRLIGKE 298
Query: 159 GATIKRLRSKTRTSIKVTP-KDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYK 217
G +K++ T T I ++P +D + + + + G EA A IM K
Sbjct: 299 GRNLKKVEQDTDTKITISPLQDLT------LYNPERTITVKGSIEA---CCLAEQEIMKK 349
Query: 218 FSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQ 277
VREA + I + + ++P ++ +I G
Sbjct: 350 ------------VREAYDNDIAAMNQQTH-----------LIPGLNLGAI-GLFPPSSAM 385
Query: 278 GYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQAS 337
GN+ P G +GAS+ E + V P +G +IGK G IK + + +
Sbjct: 386 PPPALGNSVP------GPPYGPMGASEQE--TVHVYIPAQAVGALIGKKGQHIKQLSRFA 437
Query: 338 GAQIDV--DDTKDNRDECVITVTAIESPDDIKSMA-VEAVLLLQTKINDEDDDTVTIRLL 394
GA I + + D++ VI E+ K+ + L + +++ + +
Sbjct: 438 GASIKIAPAEAPDSKMRMVIVTGPPEA--QFKAQGRIYGKLKEENFFGPKEEVKLETHIK 495
Query: 395 VSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDE-LVEVVGEVGS----- 448
V++ G +IGK G +NE++ T A+V + + P D +D+ +V+++G +
Sbjct: 496 VAAAAAGRVIGKGGKTVNELQNLTAAEVVVPREQTP---DEHDQVIVKIIGHFYASQLAQ 552
Query: 449 --VRDALVQI 456
+RD L Q+
Sbjct: 553 RKIRDILTQV 562
>gi|390479167|ref|XP_002762342.2| PREDICTED: RNA-binding protein Nova-2-like [Callithrix jacchus]
Length = 608
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 86/175 (49%), Gaps = 21/175 (12%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD-----NRDECVITVTAIE 361
E ++VL P G +IGKGG TI +++ +GA I + +KD C++ TA E
Sbjct: 129 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTA-E 187
Query: 362 SPDDIKSMAVEAVL-------------LLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSG 408
+ + + S E V +LQ + D +L+V + G IIGK G
Sbjct: 188 ALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGG 247
Query: 409 SIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDD 463
+ + + +++ A V++S+ KP+ + + +V V GE V A+ I+ ++++D
Sbjct: 248 ATVKAVMEQSGAWVQLSQ--KPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQED 300
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 87/181 (48%), Gaps = 17/181 (9%)
Query: 34 EESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV---DPFPGAKDRVVTIYSHV 90
E ++L P GS+IGK G+ I +++ET A +K+ D +PG +RV +
Sbjct: 127 EGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQG-- 184
Query: 91 KDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQ 150
E + F E + A+ K + N + T + R ++ +++VP+S
Sbjct: 185 -TAEALNAVHSF-IAEKVREIPQAMTKPE--VVNILQPQTTMNPDR--AKQAKLIVPNST 238
Query: 151 SANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFA 210
+ IIGK GAT+K + ++ ++++ K ++ + V +SGE E V KA+ A
Sbjct: 239 AGLIIGKGGATVKAVMEQSGAWVQLSQKP-----EGINLQ-ERVVTVSGEPEQVHKAVSA 292
Query: 211 I 211
I
Sbjct: 293 I 293
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 42/69 (60%), Gaps = 7/69 (10%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSK---SSRGDRVALISGTPEQKRA 612
L+VL+P+ A G +IGK G + ++K +GATI++S SK +RV L+ GT E
Sbjct: 132 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAE---- 187
Query: 613 AENLIQAFI 621
A N + +FI
Sbjct: 188 ALNAVHSFI 196
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 5/73 (6%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDS----KSSRGDRVALISGTPEQKR 611
+E+ VP N VG ++GK G L ++++GA I++S +R RV I+G+P +
Sbjct: 506 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVT-ITGSPTNTQ 564
Query: 612 AAENLIQAFIMAT 624
AA+ LI + T
Sbjct: 565 AAQYLISQRVFQT 577
>gi|30795212|ref|NP_006538.2| insulin-like growth factor 2 mRNA-binding protein 3 [Homo sapiens]
gi|114612360|ref|XP_001157593.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 3
isoform 4 [Pan troglodytes]
gi|397472938|ref|XP_003807987.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3 [Pan
paniscus]
gi|254763311|sp|O00425.2|IF2B3_HUMAN RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 3;
Short=IGF2 mRNA-binding protein 3; Short=IMP-3; AltName:
Full=IGF-II mRNA-binding protein 3; AltName: Full=KH
domain-containing protein overexpressed in cancer;
Short=hKOC; AltName: Full=VICKZ family member 3
gi|4191612|gb|AAD09828.1| IGF-II mRNA-binding protein 3 [Homo sapiens]
gi|40807047|gb|AAH65269.1| Insulin-like growth factor 2 mRNA binding protein 3 [Homo sapiens]
gi|51095013|gb|EAL24257.1| IGF-II mRNA-binding protein 3 [Homo sapiens]
gi|119614193|gb|EAW93787.1| insulin-like growth factor 2 mRNA binding protein 3, isoform CRA_b
[Homo sapiens]
gi|261861412|dbj|BAI47228.1| insulin-like growth factor 2 mRNA binding protein 3 [synthetic
construct]
gi|410216456|gb|JAA05447.1| insulin-like growth factor 2 mRNA binding protein 3 [Pan
troglodytes]
gi|410260770|gb|JAA18351.1| insulin-like growth factor 2 mRNA binding protein 3 [Pan
troglodytes]
gi|410287810|gb|JAA22505.1| insulin-like growth factor 2 mRNA binding protein 3 [Pan
troglodytes]
gi|410334615|gb|JAA36254.1| insulin-like growth factor 2 mRNA binding protein 3 [Pan
troglodytes]
Length = 579
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 147/322 (45%), Gaps = 39/322 (12%)
Query: 298 GLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITV 357
G V + +L +R+L P +G +IGK G TI++I + + ++IDV K+N ++
Sbjct: 186 GSVSKQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDV-HRKENAGAAEKSI 244
Query: 358 TAIESPDDIKSMAVEAVLLLQTKIND-EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
T + +P+ + + ++ + D + + + +++L + +G +IGK G + +I +
Sbjct: 245 TILSTPEGTSAACKSILEIMHKEAQDIKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQ 304
Query: 417 RTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPV 476
T + IS + + + + V G V + A +I+ ++R+ D S N +
Sbjct: 305 DTDTKITISPLQELTLYNP-ERTITVKGNVETCAKAEEEIMKKIRESYEND-IASMN--L 360
Query: 477 GADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPY 536
A I G ++ L PP GM +S G S PY
Sbjct: 361 QAHLI--PGLNLNA---LGLFPPTS--------------GMPPPTS----GPPSAMTPPY 397
Query: 537 GSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSR 596
++ T+ + +PA +VG +IGK G ++ + + +GA+I+++ +++
Sbjct: 398 PQFEQSETE---------TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPD 448
Query: 597 GD-RVALISGTPEQKRAAENLI 617
R+ +I+G PE + A+ I
Sbjct: 449 AKVRMVIITGPPEAQFKAQGRI 470
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 94/441 (21%), Positives = 176/441 (39%), Gaps = 83/441 (18%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKEDVEV 98
R+L P +G++IGK G I +I ++T++++ V GA ++ +TI S
Sbjct: 199 RLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILS---------- 248
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
E AA ++L++ + D K E+ +IL ++ +IGK
Sbjct: 249 -----TPEGTSAACKSILEI--------MHKEAQDIKFTEEIPLKILAHNNFVGRLIGKE 295
Query: 159 GATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKF 218
G +K++ T T I ++P + + + G E KA IM K
Sbjct: 296 GRNLKKIEQDTDTKITISPLQ-----ELTLYNPERTITVKGNVETCAKAE---EEIMKK- 346
Query: 219 SPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQG 278
+RE+ + I ++ + GL NA + P S
Sbjct: 347 -----------IRESYENDIASMNLQAHLIPGLNLNALGLFPPTS--------------- 380
Query: 279 YADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASG 338
G P ++ QSE + + P +G +IGK G IK + + +G
Sbjct: 381 ----GMPPPTSGPPSAMTPPYPQFEQSETETVHLFIPALSVGAIIGKQGQHIKQLSRFAG 436
Query: 339 AQIDV--DDTKDNRDECVITVTAIESPDDIKSMA---VEAVLLLQTKINDEDDDTVTIRL 393
A I + + D + VI I P + + A + + + ++ +++ + +
Sbjct: 437 ASIKIAPAEAPDAKVRMVI----ITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHI 492
Query: 394 LVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDE-LVEVVGEVGS---- 448
V S G +IGK G +NE++ + A+V + + P D ND+ +V++ G +
Sbjct: 493 RVPSFAAGRVIGKGGKTVNELQNLSSAEVVVPRDQTP---DENDQVVVKITGHFYACQVA 549
Query: 449 ---VRDALVQIILRLRDDALK 466
+++ L Q+ + AL+
Sbjct: 550 QRKIQEILTQVKQHQQQKALQ 570
>gi|124021196|gb|ABM88866.1| IGF2 mRNA-binding protein 1 [Danio rerio]
Length = 598
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 153/336 (45%), Gaps = 52/336 (15%)
Query: 290 STGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDN 349
S +S SG+ Q ++ +R+L P +G +IGK G TI++I + + ++IDV K+N
Sbjct: 181 SRQMSPGSGIPSKHQHADIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDV-HRKEN 239
Query: 350 RDECVITVTAIESPDDIKSMAVEAVLLLQTKINDEDDDTVT-----IRLLVSSKVIGCII 404
++ +P+ S A +L + +N E DT T +++L + +G +I
Sbjct: 240 AGAAEKPISIHSTPEGC-SAACRMILEI---MNQEAKDTKTADEVPLKVLAHNNFVGRLI 295
Query: 405 GKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDA 464
GK G + ++ + T + IS + + + V G + + A +I+ ++R +A
Sbjct: 296 GKEGRNLKKVEQDTDTKITISPLQDLTLYNP-ERTITVKGSIEACCLAEQEIMKKVR-EA 353
Query: 465 LKDRDGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLY 524
+ + N L+P + LG IG+ SS
Sbjct: 354 YDNDIAAMN---------------QQTHLIPGL----NLG---------AIGLFPPSSAM 385
Query: 525 GYGSL--SMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKI 582
+L S+ PYG M + + T+ V +PA AVG +IGK G ++ + +
Sbjct: 386 PPPALGNSVPGPPYGPMGASEQE---------TVHVYIPAQAVGALIGKKGQHIKQLSRF 436
Query: 583 SGATIEMSDSKSSRGD-RVALISGTPEQKRAAENLI 617
+GA+I+++ +++ R+ +++G PE + A+ I
Sbjct: 437 AGASIKIAPAEAPDSKMRMVIVTGPPEAQFKAQGRI 472
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 95/430 (22%), Positives = 179/430 (41%), Gaps = 82/430 (19%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKEDVEV 98
R+L P +G++IGK G I +I ++T++++ V GA ++ ++I+S
Sbjct: 202 RLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKPISIHS---------- 251
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
E AA +L++ N D K ++ ++L ++ +IGK
Sbjct: 252 -----TPEGCSAACRMILEI--------MNQEAKDTKTADEVPLKVLAHNNFVGRLIGKE 298
Query: 159 GATIKRLRSKTRTSIKVTP-KDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYK 217
G +K++ T T I ++P +D + + + + G EA A IM K
Sbjct: 299 GRNLKKVEQDTDTKITISPLQDLT------LYNPERTITVKGSIEA---CCLAEQEIMKK 349
Query: 218 FSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQ 277
VREA + I + + ++P ++ +I G
Sbjct: 350 ------------VREAYDNDIAAMNQQTH-----------LIPGLNLGAI-GLFPPSSAM 385
Query: 278 GYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQAS 337
GN+ P G +GAS+ E + V P +G +IGK G IK + + +
Sbjct: 386 PPPALGNSVP------GPPYGPMGASEQE--TVHVYIPAQAVGALIGKKGQHIKQLSRFA 437
Query: 338 GAQIDV--DDTKDNRDECVITVTAIESPDDIKSMA-VEAVLLLQTKINDEDDDTVTIRLL 394
GA I + + D++ VI E+ K+ + L + +++ + +
Sbjct: 438 GASIKIAPAEAPDSKMRMVIVTGPPEA--QFKAQGRIYGKLKEENFFGPKEEVKLETHIK 495
Query: 395 VSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDE-LVEVVGEVGS----- 448
V++ G +IGK G +NE++ T A+V + + P D +D+ +V+++G +
Sbjct: 496 VAAAAAGRVIGKGGKTVNELQNLTAAEVVVPREQTP---DEHDQVIVKIIGHFYASQLAQ 552
Query: 449 --VRDALVQI 456
+RD L Q+
Sbjct: 553 RKIRDILTQV 562
>gi|291409711|ref|XP_002721142.1| PREDICTED: poly(rC) binding protein 2-like isoform 1 [Oryctolagus
cuniculus]
Length = 362
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 163/354 (46%), Gaps = 41/354 (11%)
Query: 297 SGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVIT 356
+G++ + L IR+L ++G +IGK G ++K +R+ SGA+I++ + N E +IT
Sbjct: 3 TGVIDGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIIT 60
Query: 357 VTAIESPDD--IKSMAV------EAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSG 408
+ P + K+ A+ E + T VT+RL+V + G +IGK G
Sbjct: 61 LAG---PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPLVTLRLVVPASQCGSLIGKGG 117
Query: 409 SIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKD- 467
I EIR+ T A V+++ P ++ + + + G S+ + + I + + + K
Sbjct: 118 CKIKEIRESTGAQVQVAGDMLP---NSTERAITIAGIPQSIIECVKHICVVMLESPPKGV 174
Query: 468 ----RDGSRNPPV---GADHIYSSGT-GISMPPLLPSI--------PPVGPLGYD-QRAD 510
R + PV G YS+G+ S P PS+ PP+ Q A
Sbjct: 175 TIPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAI 234
Query: 511 SGSGIGMLSSSSL-YGYGSLSMGDSPYGSMSSYSSKL---YGGL---PPPLTLEVLVPAN 563
+ L ++ + ++ G++ + + S S ++ + GL + E+ +P +
Sbjct: 235 PQPDLTKLHQLAVQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPND 294
Query: 564 AVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLI 617
+G +IG G+ + I ++SGA I+++++ DR I+G+ A+ LI
Sbjct: 295 LIGCIIGCQGAKINEICQMSGALIKIANTVEGSTDRQVTITGSAASISLAQYLI 348
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 81/367 (22%), Positives = 149/367 (40%), Gaps = 88/367 (23%)
Query: 36 SVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKED 95
++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R++T
Sbjct: 13 TLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIIT---------- 60
Query: 96 VEVDDEFNDKEPLCAAQDALLKVHAAIANAV-----ANATDNDKKRKEKEECQILVPSSQ 150
L +A+ K A I + + ++ T++ + +++VP+SQ
Sbjct: 61 ------------LAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPLVTLRLVVPASQ 108
Query: 151 SANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFA 210
++IGK G IK +R T ++V T + + I+G +++ + +
Sbjct: 109 CGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNST-------ERAITIAGIPQSIIECVKH 161
Query: 211 ISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGL-----------YPNADPIL 259
I +M + P+ T+ P PS P+ GG +P+ P +
Sbjct: 162 ICVVMLESPPK-----GVTIPYRPK----PSSSPVIFAGGQDRYSTGSDSASFPHTTPSM 212
Query: 260 --------PSRSVPSILGAARVPD-----LQGYADTGNTWPVY--STGLSLV-------- 296
P +I G +P L A + +P+ +TG S +
Sbjct: 213 CLNPDLEGPPLEAYTIQGQYAIPQPDLTKLHQLAVQQSHFPMTHGNTGFSGIESSSPEVK 272
Query: 297 ---SGLVGASQ--SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRD 351
+GL ++Q S EL I P + IG +IG G I I Q SGA I + +T +
Sbjct: 273 GYWAGLDASAQTTSHELTI----PNDLIGCIIGCQGAKINEICQMSGALIKIANTVEGST 328
Query: 352 ECVITVT 358
+ +T+T
Sbjct: 329 DRQVTIT 335
>gi|302564995|ref|NP_001180850.1| insulin-like growth factor 2 mRNA-binding protein 1 [Macaca
mulatta]
Length = 577
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 149/332 (44%), Gaps = 47/332 (14%)
Query: 292 GLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRD 351
G + +G Q ++ +R+L P +G +IGK G TI++I + + ++IDV K+N
Sbjct: 180 GSPVAAGAPAKQQQVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDV-HRKENAG 238
Query: 352 ECVITVTAIESPDDIKSMAVEAVLLLQTKIND-EDDDTVTIRLLVSSKVIGCIIGKSGSI 410
++ +P+ S + ++ + D + D V +++L + +G +IGK G
Sbjct: 239 AAEKAISVHSTPEGCSSACKMILEIMHKEAKDTKTADEVPLKILAHNNFVGRLIGKEGRN 298
Query: 411 INEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDG 470
+ ++ + T+ + IS + + + V G + + A +I+ ++R+ D
Sbjct: 299 LKKVEQDTETKITISSLQDLTLYNP-ERTITVKGAIENCCRAEQEIMKKVREAYEND--- 354
Query: 471 SRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLS 530
V A + S L+P + + G+ SSS++ S
Sbjct: 355 -----VAAMSLQSH--------LIPGL-----------NLAAVGLFPASSSAVPPPPSSV 390
Query: 531 MGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMS 590
G +PY S + P ++V +PA AVG +IGK G ++ + + + A+I+++
Sbjct: 391 TGAAPYSS--------FMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIA 442
Query: 591 -----DSKSSRGDRVALISGTPEQKRAAENLI 617
DSK R+ +I+G PE + A+ I
Sbjct: 443 PPETPDSKV----RMVIITGPPEAQFKAQGRI 470
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 89/375 (23%), Positives = 157/375 (41%), Gaps = 74/375 (19%)
Query: 143 QILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKD---ASEP---THS--------CA 188
++LVP+ IIGK GATI+ + +T++ I V K+ A+E HS C
Sbjct: 199 RLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTPEGCSSACK 258
Query: 189 MEFDNFVLISGESEAVKKA------LFAISAIMYKFSPREDIPLETTVREAPPSIIIPS- 241
M + ++ E++ K A + A + + + +E L+ ++ I I S
Sbjct: 259 MILE---IMHKEAKDTKTADEVPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSL 315
Query: 242 -DVPIYPP-------GGL-----------------YPN--ADPILPSRSVPSILGAARVP 274
D+ +Y P G + Y N A L S +P L A V
Sbjct: 316 QDLTLYNPERTITVKGAIENCCRAEQEIMKKVREAYENDVAAMSLQSHLIPG-LNLAAVG 374
Query: 275 DLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIR 334
+ P TG + S + A + E +++V P +G +IGK G IK +
Sbjct: 375 LFPASSSAVPPPPSSVTGAAPYSSFMQAPEQE--MVQVFIPAQAVGAIIGKKGQHIKQLS 432
Query: 335 QASGAQIDVD--DTKDNRDECVITVTAIESPDDIKSMA---VEAVLLLQTKINDEDDDTV 389
+ + A I + +T D++ VI I P + + A + L + +++ +
Sbjct: 433 RFASASIKIAPPETPDSKVRMVI----ITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKL 488
Query: 390 TIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDE-LVEVVGEVGS 448
+ V + G +IGK G +NE++ T A+V + + P D ND+ +V+++G +
Sbjct: 489 ETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQTP---DENDQVIVKIIGHFYA 545
Query: 449 -------VRDALVQI 456
+RD L Q+
Sbjct: 546 SQMAQRKIRDILAQV 560
Score = 46.2 bits (108), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 95/248 (38%), Gaps = 67/248 (27%)
Query: 28 KDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKV---VDPFPGAKDRVV 84
KD K +E V +IL + +G +IGK G+ + + Q+T ++ + D +R +
Sbjct: 269 KDTKTADE-VPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYNPERTI 327
Query: 85 TIYSHVKDKEDVEVDDEFNDKEPLC-AAQDALLKVHAAIANAVANATDNDK--------- 134
T+ + E C A Q+ + KV A N VA +
Sbjct: 328 TVKGAI---------------ENCCRAEQEIMKKVREAYENDVAAMSLQSHLIPGLNLAA 372
Query: 135 ----------------------------KRKEKEECQILVPSSQSANIIGKAGATIKRLR 166
+ E+E Q+ +P+ IIGK G IK+L
Sbjct: 373 VGLFPASSSAVPPPPSSVTGAAPYSSFMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLS 432
Query: 167 SKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYK---FSPRED 223
SIK+ P + P M V+I+G EA KA I + + F P+E+
Sbjct: 433 RFASASIKIAPPET--PDSKVRM-----VIITGPPEAQFKAQGRIYGKLKEENFFGPKEE 485
Query: 224 IPLETTVR 231
+ LET +R
Sbjct: 486 VKLETHIR 493
Score = 42.7 bits (99), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 24/148 (16%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDP-FPGAKDRVVTIYSHVKDK 93
E + ++ P +G++IGK G+ I + + A +K+ P P +K R+V I
Sbjct: 404 EQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVII------- 456
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
+A K I + K + K E I VP+S +
Sbjct: 457 ---------------TGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGR 501
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+IGK G T+ L++ T + V P+D +
Sbjct: 502 VIGKGGKTVNELQNLTAAEV-VVPRDQT 528
>gi|281353861|gb|EFB29445.1| hypothetical protein PANDA_010268 [Ailuropoda melanoleuca]
Length = 596
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 147/322 (45%), Gaps = 39/322 (12%)
Query: 298 GLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITV 357
G V + +L +R+L P +G +IGK G TI++I + + ++IDV K+N ++
Sbjct: 186 GSVSKQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHR-KENAGAAEKSI 244
Query: 358 TAIESPDDIKSMAVEAVLLLQTKIND-EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
T + +P+ + + ++ + D + + + +++L + +G +IGK G + +I +
Sbjct: 245 TILSTPEGTSAACKSILEIMHKEAQDIKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQ 304
Query: 417 RTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPV 476
T + IS + + + + V G V + A +I+ ++R+ D S N +
Sbjct: 305 DTDTKITISPLQELTLYNP-ERTITVKGNVETCAKAEEEIMKKIRESYEND-IASMN--L 360
Query: 477 GADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPY 536
A I G ++ L PP GM +S G S PY
Sbjct: 361 QAHLI--PGLNLNA---LGLFPPTS--------------GMPPPTS----GPPSAMTPPY 397
Query: 537 GSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSR 596
++ T+ + +PA +VG +IGK G ++ + + +GA+I+++ +++
Sbjct: 398 PQFEQSETE---------TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPD 448
Query: 597 GD-RVALISGTPEQKRAAENLI 617
R+ +I+G PE + A+ I
Sbjct: 449 AKVRMVIITGPPEAQFKAQGRI 470
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 94/458 (20%), Positives = 176/458 (38%), Gaps = 100/458 (21%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKEDVEV 98
R+L P +G++IGK G I +I ++T++++ V GA ++ +TI S
Sbjct: 199 RLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILS---------- 248
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
E AA ++L+ + + D K E+ +IL ++ +IGK
Sbjct: 249 -----TPEGTSAACKSILE--------IMHKEAQDIKFTEEIPLKILAHNNFVGRLIGKE 295
Query: 159 GATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKF 218
G +K++ T T I ++P + + + G E KA IM K
Sbjct: 296 GRNLKKIEQDTDTKITISPLQ-----ELTLYNPERTITVKGNVETCAKAE---EEIMKK- 346
Query: 219 SPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQG 278
+RE+ + I ++ + GL NA + P S
Sbjct: 347 -----------IRESYENDIASMNLQAHLIPGLNLNALGLFPPTS--------------- 380
Query: 279 YADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASG 338
G P ++ QSE + + P +G +IGK G IK + + +G
Sbjct: 381 ----GMPPPTSGPPSAMTPPYPQFEQSETETVHLFIPALSVGAIIGKQGQHIKQLSRFAG 436
Query: 339 AQIDV--DDTKDNRDECVITVTAIESPDDIKSMA---VEAVLLLQTKINDEDDDTVTIRL 393
A I + + D + VI I P + + A + + + ++ +++ + +
Sbjct: 437 ASIKIAPAEAPDAKVRMVI----ITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHI 492
Query: 394 LVSSKVIGCIIGKSGSI-----------------INEIRKRTKADVRISKGDKPKCADAN 436
V S G +IGK G +NE++ + A+V + + P D N
Sbjct: 493 RVPSFAAGRVIGKGGKTASTSAKPVQWTCVYLVQVNELQNLSSAEVVVPRDQTP---DEN 549
Query: 437 DE-LVEVVGEVGS-------VRDALVQIILRLRDDALK 466
D+ +V++ G + +++ L Q+ + AL+
Sbjct: 550 DQVVVKITGHFYACQVAQRKIQEILTQVKQHQQQKALQ 587
>gi|332856422|ref|XP_524310.3| PREDICTED: RNA-binding protein Nova-2 [Pan troglodytes]
Length = 607
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 86/175 (49%), Gaps = 21/175 (12%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD-----NRDECVITVTAIE 361
E ++VL P G +IGKGG TI +++ +GA I + +KD C++ TA E
Sbjct: 147 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTA-E 205
Query: 362 SPDDIKSMAVEAVL-------------LLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSG 408
+ + + S E V +LQ + D +L+V + G IIGK G
Sbjct: 206 ALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGG 265
Query: 409 SIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDD 463
+ + + +++ A V++S+ KP+ + + +V V GE V A+ I+ ++++D
Sbjct: 266 ATVKAVMEQSGAWVQLSQ--KPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQED 318
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 88/184 (47%), Gaps = 17/184 (9%)
Query: 31 KGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV---DPFPGAKDRVVTIY 87
K E ++L P GS+IGK G+ I +++ET A +K+ D +PG +RV +
Sbjct: 142 KTEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQ 201
Query: 88 SHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVP 147
E + F E + A+ K + N + T + R ++ +++VP
Sbjct: 202 G---TAEALNAVHSF-IAEKVREIPQAMTKPE--VVNILQPQTTMNPDR--AKQAKLIVP 253
Query: 148 SSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKA 207
+S + IIGK GAT+K + ++ ++++ K ++ + V +SGE E V KA
Sbjct: 254 NSTAGLIIGKGGATVKAVMEQSGAWVQLSQKP-----EGINLQ-ERVVTVSGEPEQVHKA 307
Query: 208 LFAI 211
+ AI
Sbjct: 308 VSAI 311
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 42/69 (60%), Gaps = 7/69 (10%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSK---SSRGDRVALISGTPEQKRA 612
L+VL+P+ A G +IGK G + ++K +GATI++S SK +RV L+ GT E
Sbjct: 150 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAE---- 205
Query: 613 AENLIQAFI 621
A N + +FI
Sbjct: 206 ALNAVHSFI 214
Score = 42.0 bits (97), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 5/66 (7%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDS----KSSRGDRVALISGTPEQKR 611
+E+ VP N VG ++GK G L ++++GA I++S +R RV I+G+P +
Sbjct: 524 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVT-ITGSPAATQ 582
Query: 612 AAENLI 617
AA+ LI
Sbjct: 583 AAQYLI 588
>gi|417411544|gb|JAA52203.1| Putative k-logy type rna binding protein, partial [Desmodus
rotundus]
Length = 544
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 138/341 (40%), Gaps = 42/341 (12%)
Query: 315 PFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDE--CVITVT--AIESPDDIKSMA 370
P +G +IG+GG I I+ SG +I + E CV+T T +IE +
Sbjct: 57 PDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPESIELAKRLLGQI 116
Query: 371 VEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKAD-VRISKGDK 429
V+ ND D + +L+ + +G +IGK G I ++++RT V I G
Sbjct: 117 VDRCRNGPGFHNDVDGSSTVQEVLIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPL 176
Query: 430 PKCADANDELVEVVGEVGSVRDALVQIILRLRDDA-LKDRDGSRNPPVGADHIYSS---- 484
P AD + +V R+ +++II R +D A + G P G + S
Sbjct: 177 PTGADKPLRMTGDPFKVQQAREMVLEII-REKDQADFRGARGDFAPRTGGGSLEVSVPRF 235
Query: 485 --------------------GTGISMPP---LLP--SIPPVGPLGYDQRADSGSGIGMLS 519
G I P + P + +GP Q A +L+
Sbjct: 236 AVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPERAAQVMGPPDRCQHAAHVINELILT 295
Query: 520 SSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANI 579
+ G+G L++ +S GG+ + VPA+ G VIGK G N+ +I
Sbjct: 296 AQERDGFGGLAVARGRGRGRGDWSLGTPGGI---QEITYTVPADKCGLVIGKGGENIKSI 352
Query: 580 RKISGATIEMSDSKSSRGD---RVALISGTPEQKRAAENLI 617
+ SGA +E+ + D R+ I G P+Q A +LI
Sbjct: 353 NQQSGAHVELQRNPPPNTDPSLRIFTIRGIPQQIEVARHLI 393
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%)
Query: 554 LTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAA 613
+T E VP VG +IG+ G ++ I+ SG I+++ S +R +++GTPE A
Sbjct: 50 ITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPESIELA 109
Query: 614 ENLI 617
+ L+
Sbjct: 110 KRLL 113
Score = 40.0 bits (92), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 65/141 (46%), Gaps = 19/141 (13%)
Query: 44 PDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFN 103
PD ++G +IG+ G+ I+ I+ E+ ++++ G +R + E +E+
Sbjct: 57 PDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVL---TGTPESIEL----- 108
Query: 104 DKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIK 163
A+ L ++ N D D +E +L+P+S+ +IGK G TIK
Sbjct: 109 -------AKRLLGQIVDRCRNGPGFHNDVDGSSTVQE---VLIPASKVGLVIGKGGETIK 158
Query: 164 RLRSKTRTSIKVTPKDASEPT 184
+L+ +T + V +D PT
Sbjct: 159 QLQERTGVKM-VMIQDGPLPT 178
Score = 39.3 bits (90), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 5/86 (5%)
Query: 537 GSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSR 596
G+ ++ + GG +LEV VP AVG VIG+ G + I+ +G I+
Sbjct: 214 GARGDFAPRTGGG-----SLEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGIS 268
Query: 597 GDRVALISGTPEQKRAAENLIQAFIM 622
+R A + G P++ + A ++I I+
Sbjct: 269 PERAAQVMGPPDRCQHAAHVINELIL 294
>gi|296477630|tpg|DAA19745.1| TPA: neuro-oncological ventral antigen 2-like [Bos taurus]
Length = 640
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 89/180 (49%), Gaps = 21/180 (11%)
Query: 302 ASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD-----NRDECVIT 356
A++ E ++VL P G +IGKGG TI +++ +GA I + +KD C++
Sbjct: 175 ANEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQ 234
Query: 357 VTAIESPDDIKSMAVEAVL-------------LLQTKINDEDDDTVTIRLLVSSKVIGCI 403
TA E+ + + S E V +LQ + D +L+V + G I
Sbjct: 235 GTA-EALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLI 293
Query: 404 IGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDD 463
IGK G+ + + +++ A V++S+ KP+ + + +V V GE V A+ I+ ++++D
Sbjct: 294 IGKGGATVKAVMEQSGAWVQLSQ--KPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQED 351
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 92/206 (44%), Gaps = 17/206 (8%)
Query: 9 RSQRDNDRDGKNQKRRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRA 68
+SQ + G Q D E ++L P GS+IGK G+ I +++ET A
Sbjct: 153 KSQLYHFPGGTTQAVPDGYPDVANEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGA 212
Query: 69 RVKVV---DPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANA 125
+K+ D +PG +RV + E + F E + A+ K + N
Sbjct: 213 TIKLSKSKDFYPGTTERVCLVQG---TAEALNAVHSF-IAEKVREIPQAMTKPE--VVNI 266
Query: 126 VANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTH 185
+ T + R ++ +++VP+S + IIGK GAT+K + ++ ++++ K
Sbjct: 267 LQPQTTMNPDR--AKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQ 324
Query: 186 SCAMEFDNFVLISGESEAVKKALFAI 211
+ V +SGE E V KA+ AI
Sbjct: 325 ------ERVVTVSGEPEQVHKAVSAI 344
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 42/69 (60%), Gaps = 7/69 (10%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSK---SSRGDRVALISGTPEQKRA 612
L+VL+P+ A G +IGK G + ++K +GATI++S SK +RV L+ GT E
Sbjct: 183 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAE---- 238
Query: 613 AENLIQAFI 621
A N + +FI
Sbjct: 239 ALNAVHSFI 247
Score = 42.4 bits (98), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 5/66 (7%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDS----KSSRGDRVALISGTPEQKR 611
+E+ VP N VG ++GK G L ++++GA I++S +R RV I+G+P +
Sbjct: 557 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVT-ITGSPAATQ 615
Query: 612 AAENLI 617
AA+ LI
Sbjct: 616 AAQYLI 621
>gi|410952456|ref|XP_003982896.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
isoform 2 [Felis catus]
Length = 580
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 64/313 (20%), Positives = 147/313 (46%), Gaps = 38/313 (12%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
+L +R+L P +G +IGK G TI++I + + ++IDV K+N ++T + +P+
Sbjct: 195 DLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVH-RKENAGAAEKSITILSTPEGT 253
Query: 367 KSMAVEAVLLLQTKIND-EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRIS 425
+ + ++ + D + + + +++L + +G +IGK G + +I + T + IS
Sbjct: 254 SAACKSILEIMHKEAQDIKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITIS 313
Query: 426 KGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSG 485
+ + + + V G V + A +I+ ++R+ D + + ++ +
Sbjct: 314 PLQELTLYNP-ERTITVKGNVETCAKAEEEIMKKIRESYEND--------IASMNLQAH- 363
Query: 486 TGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSK 545
L+P + + + +G+ +S G P +M+ +
Sbjct: 364 -------LIPGL-------------NLNALGLFPPTS----GMPPPTSGPPSAMTPPYPQ 399
Query: 546 LYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGD-RVALIS 604
+ P T+ + +PA +VG +IGK G ++ + + +GA+I+++ +++ R+ +I+
Sbjct: 400 -FEQAPETETVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIIT 458
Query: 605 GTPEQKRAAENLI 617
G PE + A+ I
Sbjct: 459 GPPEAQFKAQGRI 471
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 95/448 (21%), Positives = 178/448 (39%), Gaps = 96/448 (21%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKEDVEV 98
R+L P +G++IGK G I +I ++T++++ V GA ++ +TI S
Sbjct: 199 RLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILS---------- 248
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
E AA ++L++ + D K E+ +IL ++ +IGK
Sbjct: 249 -----TPEGTSAACKSILEI--------MHKEAQDIKFTEEIPLKILAHNNFVGRLIGKE 295
Query: 159 GATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKF 218
G +K++ T T I ++P + + + G E KA IM K
Sbjct: 296 GRNLKKIEQDTDTKITISPLQ-----ELTLYNPERTITVKGNVETCAKAE---EEIMKK- 346
Query: 219 SPREDIPLETTVREAPPSIIIPSDVPIYP-PG------GLYPNADPILPSRSVPSILGAA 271
+RE+ + I ++ + PG GL+P + P S P +A
Sbjct: 347 -----------IRESYENDIASMNLQAHLIPGLNLNALGLFPPTSGMPPPTSGPP---SA 392
Query: 272 RVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIK 331
P + T V+ + P +G +IGK G IK
Sbjct: 393 MTPPYPQFEQAPETETVH----------------------LFIPALSVGAIIGKQGQHIK 430
Query: 332 SIRQASGAQIDVD--DTKDNRDECVITVTAIESPDDIKSMA---VEAVLLLQTKINDEDD 386
+ + +GA I + + D + VI I P + + A + + + ++ +++
Sbjct: 431 QLSRFAGASIKIAPAEAPDAKVRMVI----ITGPPEAQFKAQGRIYGKIKEENFVSPKEE 486
Query: 387 DTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDE-LVEVVGE 445
+ + V S G +IGK G +NE++ + A+V + + P D ND+ +V++ G
Sbjct: 487 VKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEVVVPRDQTP---DENDQVVVKITGH 543
Query: 446 VGS-------VRDALVQIILRLRDDALK 466
+ +++ L Q+ + AL+
Sbjct: 544 FYACQVAQRKIQEILTQVKQHQQQKALQ 571
>gi|296209450|ref|XP_002751548.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
[Callithrix jacchus]
Length = 579
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 144/313 (46%), Gaps = 39/313 (12%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
+L +R+L P +G +IGK G TI++I + + ++IDV K+N ++T + +P+
Sbjct: 195 DLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDV-HRKENAGAAEKSITILSTPEGT 253
Query: 367 KSMAVEAVLLLQTKIND-EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRIS 425
+ + ++ + D + + + +++L + +G +IGK G + +I + T + IS
Sbjct: 254 SAACKSILEIMHKEAQDIKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITIS 313
Query: 426 KGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSG 485
+ + + + V G V + A +I+ ++R+ D S N + A I G
Sbjct: 314 PLQELTLYNP-ERTITVKGNVETCAKAEEEIMKKIRESYEND-IASMN--LQAHLI--PG 367
Query: 486 TGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSK 545
++ L PP GM +S G S PY ++
Sbjct: 368 LNLNA---LGLFPPTS--------------GMPPPTS----GPPSAMTPPYPQFEQSETE 406
Query: 546 LYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGD-RVALIS 604
T+ + +PA +VG +IGK G ++ + + +GA+I+++ +++ R+ +I+
Sbjct: 407 ---------TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIIT 457
Query: 605 GTPEQKRAAENLI 617
G PE + A+ I
Sbjct: 458 GPPEAQFKAQGRI 470
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 89/407 (21%), Positives = 162/407 (39%), Gaps = 75/407 (18%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKEDVEV 98
R+L P +G++IGK G I +I ++T++++ V GA ++ +TI S
Sbjct: 199 RLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILS---------- 248
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
E AA ++L++ + D K E+ +IL ++ +IGK
Sbjct: 249 -----TPEGTSAACKSILEI--------MHKEAQDIKFTEEIPLKILAHNNFVGRLIGKE 295
Query: 159 GATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKF 218
G +K++ T T I ++P + + + G E KA IM K
Sbjct: 296 GRNLKKIEQDTDTKITISPLQ-----ELTLYNPERTITVKGNVETCAKAE---EEIMKK- 346
Query: 219 SPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQG 278
+RE+ + I ++ + GL NA + P S
Sbjct: 347 -----------IRESYENDIASMNLQAHLIPGLNLNALGLFPPTS--------------- 380
Query: 279 YADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASG 338
G P ++ QSE + + P +G +IGK G IK + + +G
Sbjct: 381 ----GMPPPTSGPPSAMTPPYPQFEQSETETVHLFIPALSVGAIIGKQGQHIKQLSRFAG 436
Query: 339 AQIDV--DDTKDNRDECVITVTAIESPDDIKSMA---VEAVLLLQTKINDEDDDTVTIRL 393
A I + + D + VI I P + + A + + + ++ +++ + +
Sbjct: 437 ASIKIAPAEAPDAKVRMVI----ITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHI 492
Query: 394 LVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELV 440
V S G +IGK G +NE++ + A+V + + P D ND++V
Sbjct: 493 RVPSFAAGRVIGKGGKTVNELQNLSSAEVVVPRDQTP---DENDQVV 536
>gi|345564609|gb|EGX47569.1| hypothetical protein AOL_s00083g77 [Arthrobotrys oligospora ATCC
24927]
Length = 459
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 94/382 (24%), Positives = 162/382 (42%), Gaps = 80/382 (20%)
Query: 294 SLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDEC 353
+L S + +S + +R L + VIGKGG + IR+ S A+ V + E
Sbjct: 89 ALTSSIQPVDESNWIHVRALITSAEAATVIGKGGENVTQIRRLSEAKCTVSEYTRGAVER 148
Query: 354 VITVTAIESPDDIKSMAVEAVLLLQTKINDE--------DDDTVTIRLLVSSKVIGCIIG 405
++TV+ + ++A L+++T IN E + T +RLL+ +IG IIG
Sbjct: 149 ILTVSG-----GVDAVAKAFGLIIRT-INSEPLSSASTQNSKTFPLRLLIPHILIGSIIG 202
Query: 406 KSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDAL 465
K G I EI+ + A + S P + + + VVG +V A + L + L
Sbjct: 203 KGGMRIREIQDASGARLNASDSCLPL---STERSLMVVGVADAVHIATYYVATTLVEQ-L 258
Query: 466 KDRDG---------------------------SRNPPVG--------------ADHIYSS 484
+R G + P G A ++
Sbjct: 259 TERFGGPAASAYASRSGGPAGAVPGGMQVVPYTPQPAFGNYGHPDNYRRHNNQAQRTPAN 318
Query: 485 GTGISMPPLLPSIPPV----GPLGY----DQRADSGSGIGMLSSSSLYGY-GSLSMGDSP 535
GI P L PPV P+ Y Q A SG+G + + G + G
Sbjct: 319 PYGI---PYLHGQPPVQQPAAPIHYADPSAQPAYSGAGPHQPTVPHHGAHTGPAAQG--- 372
Query: 536 YGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSS 595
+G+M++ + G P LT ++ +P + VG +IGK G+ + IR++SG+ I++++ + +
Sbjct: 373 HGNMAA----MIPGAP--LTQQIYIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQDN 426
Query: 596 RGDRVALISGTPEQKRAAENLI 617
+R+ I+GT E + A ++
Sbjct: 427 SNERLVTITGTQECNQMALYML 448
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
L ++ P + +G +IGKGG I IRQ SG+ I +++ +DN +E ++T+T + + +
Sbjct: 385 LTQQIYIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQDNSNERLVTITGTQECNQM- 443
Query: 368 SMAVEAVLLLQTKINDE 384
A+ +L +++ E
Sbjct: 444 -----ALYMLYSRLESE 455
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 32/47 (68%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTI 86
+I P+ ++G++IGK G IN IRQ + + +K+ +P + +R+VTI
Sbjct: 388 QIYIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQDNSNERLVTI 434
>gi|56237027|ref|NP_006537.3| insulin-like growth factor 2 mRNA-binding protein 1 isoform 1 [Homo
sapiens]
gi|296202548|ref|XP_002748506.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
isoform 1 [Callithrix jacchus]
gi|297715965|ref|XP_002834307.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
isoform 1 [Pongo abelii]
gi|332259442|ref|XP_003278798.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
isoform 1 [Nomascus leucogenys]
gi|354483617|ref|XP_003503989.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Cricetulus griseus]
gi|402899533|ref|XP_003912749.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
isoform 1 [Papio anubis]
gi|296434536|sp|Q9NZI8.2|IF2B1_HUMAN RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 1;
Short=IGF2 mRNA-binding protein 1; Short=IMP-1; AltName:
Full=Coding region determinant-binding protein;
Short=CRD-BP; AltName: Full=IGF-II mRNA-binding protein
1; AltName: Full=VICKZ family member 1; AltName:
Full=Zip code-binding protein 1; Short=ZBP-1;
Short=Zipcode-binding protein 1
gi|4191608|gb|AAD09826.1| IGF-II mRNA-binding protein 1 [Homo sapiens]
gi|157170258|gb|AAI52771.1| Insulin-like growth factor 2 mRNA binding protein 1 [synthetic
construct]
gi|162318726|gb|AAI56958.1| Insulin-like growth factor 2 mRNA binding protein 1 [synthetic
construct]
gi|168275834|dbj|BAG10637.1| insulin-like growth factor 2 mRNA-binding protein 1 [synthetic
construct]
gi|189053788|dbj|BAG36040.1| unnamed protein product [Homo sapiens]
gi|355568496|gb|EHH24777.1| hypothetical protein EGK_08493 [Macaca mulatta]
Length = 577
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 147/332 (44%), Gaps = 47/332 (14%)
Query: 292 GLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRD 351
G + +G Q ++ +R+L P +G +IGK G TI++I + + ++IDV K+N
Sbjct: 180 GSPVAAGAPAKQQQVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDV-HRKENAG 238
Query: 352 ECVITVTAIESPDDIKSMAVEAVLLLQTKIND-EDDDTVTIRLLVSSKVIGCIIGKSGSI 410
++ +P+ S + ++ + D + D V +++L + +G +IGK G
Sbjct: 239 AAEKAISVHSTPEGCSSACKMILEIMHKEAKDTKTADEVPLKILAHNNFVGRLIGKEGRN 298
Query: 411 INEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDG 470
+ ++ + T+ + IS + + + V G + + A +I+ ++R+ D
Sbjct: 299 LKKVEQDTETKITISSLQDLTLYNP-ERTITVKGAIENCCRAEQEIMKKVREAYEND--- 354
Query: 471 SRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLS 530
V A + S L+P + + G+ SSS++ S
Sbjct: 355 -----VAAMSLQSH--------LIPGL-----------NLAAVGLFPASSSAVPPPPSSV 390
Query: 531 MGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATI--- 587
G +PY S + P ++V +PA AVG +IGK G ++ + + + A+I
Sbjct: 391 TGAAPYSS--------FMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIA 442
Query: 588 --EMSDSKSSRGDRVALISGTPEQKRAAENLI 617
E DSK R+ +I+G PE + A+ I
Sbjct: 443 PPETPDSKV----RMVIITGPPEAQFKAQGRI 470
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 89/375 (23%), Positives = 157/375 (41%), Gaps = 74/375 (19%)
Query: 143 QILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKD---ASEP---THS--------CA 188
++LVP+ IIGK GATI+ + +T++ I V K+ A+E HS C
Sbjct: 199 RLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTPEGCSSACK 258
Query: 189 MEFDNFVLISGESEAVKKA------LFAISAIMYKFSPREDIPLETTVREAPPSIIIPS- 241
M + ++ E++ K A + A + + + +E L+ ++ I I S
Sbjct: 259 MILE---IMHKEAKDTKTADEVPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSL 315
Query: 242 -DVPIYPP-------GGL-----------------YPN--ADPILPSRSVPSILGAARVP 274
D+ +Y P G + Y N A L S +P L A V
Sbjct: 316 QDLTLYNPERTITVKGAIENCCRAEQEIMKKVREAYENDVAAMSLQSHLIPG-LNLAAVG 374
Query: 275 DLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIR 334
+ P TG + S + A + E +++V P +G +IGK G IK +
Sbjct: 375 LFPASSSAVPPPPSSVTGAAPYSSFMQAPEQE--MVQVFIPAQAVGAIIGKKGQHIKQLS 432
Query: 335 QASGAQIDVD--DTKDNRDECVITVTAIESPDDIKSMA---VEAVLLLQTKINDEDDDTV 389
+ + A I + +T D++ VI I P + + A + L + +++ +
Sbjct: 433 RFASASIKIAPPETPDSKVRMVI----ITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKL 488
Query: 390 TIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDE-LVEVVGEVGS 448
+ V + G +IGK G +NE++ T A+V + + P D ND+ +V+++G +
Sbjct: 489 ETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQTP---DENDQVIVKIIGHFYA 545
Query: 449 -------VRDALVQI 456
+RD L Q+
Sbjct: 546 SQMAQRKIRDILAQV 560
Score = 46.2 bits (108), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 95/248 (38%), Gaps = 67/248 (27%)
Query: 28 KDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKV---VDPFPGAKDRVV 84
KD K +E V +IL + +G +IGK G+ + + Q+T ++ + D +R +
Sbjct: 269 KDTKTADE-VPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYNPERTI 327
Query: 85 TIYSHVKDKEDVEVDDEFNDKEPLC-AAQDALLKVHAAIANAVANATDNDK--------- 134
T+ + E C A Q+ + KV A N VA +
Sbjct: 328 TVKGAI---------------ENCCRAEQEIMKKVREAYENDVAAMSLQSHLIPGLNLAA 372
Query: 135 ----------------------------KRKEKEECQILVPSSQSANIIGKAGATIKRLR 166
+ E+E Q+ +P+ IIGK G IK+L
Sbjct: 373 VGLFPASSSAVPPPPSSVTGAAPYSSFMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLS 432
Query: 167 SKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYK---FSPRED 223
SIK+ P + P M V+I+G EA KA I + + F P+E+
Sbjct: 433 RFASASIKIAPPET--PDSKVRM-----VIITGPPEAQFKAQGRIYGKLKEENFFGPKEE 485
Query: 224 IPLETTVR 231
+ LET +R
Sbjct: 486 VKLETHIR 493
Score = 42.7 bits (99), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 24/148 (16%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDP-FPGAKDRVVTIYSHVKDK 93
E + ++ P +G++IGK G+ I + + A +K+ P P +K R+V I
Sbjct: 404 EQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVII------- 456
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
+A K I + K + K E I VP+S +
Sbjct: 457 ---------------TGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGR 501
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+IGK G T+ L++ T + V P+D +
Sbjct: 502 VIGKGGKTVNELQNLTAAEV-VVPRDQT 528
>gi|344285913|ref|XP_003414704.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
isoform 1 [Loxodonta africana]
Length = 577
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 147/332 (44%), Gaps = 47/332 (14%)
Query: 292 GLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRD 351
G + +G Q ++ +R+L P +G +IGK G TI++I + + ++IDV K+N
Sbjct: 180 GSPVAAGAPAKQQQVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDV-HRKENAG 238
Query: 352 ECVITVTAIESPDDIKSMAVEAVLLLQTKIND-EDDDTVTIRLLVSSKVIGCIIGKSGSI 410
++ +P+ S + ++ + D + D V +++L + +G +IGK G
Sbjct: 239 AAEKAISVHSTPEGCSSACKMILEIMHKEAKDTKTADEVPLKILAHNNFVGRLIGKEGRN 298
Query: 411 INEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDG 470
+ ++ + T+ + IS + + + V G + + A +I+ ++R+ D
Sbjct: 299 LKKVEQDTETKITISSLQDLTLYNP-ERTITVKGAIENCCRAEQEIMKKVREAYEND--- 354
Query: 471 SRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLS 530
V A + S L+P + + G+ SSS++ S
Sbjct: 355 -----VAAMSLQSH--------LIPGL-----------NLAAVGLFPASSSAVPPPPSSV 390
Query: 531 MGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATI--- 587
G +PY S + P ++V +PA AVG +IGK G ++ + + + A+I
Sbjct: 391 TGAAPYSS--------FMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIA 442
Query: 588 --EMSDSKSSRGDRVALISGTPEQKRAAENLI 617
E DSK R+ +I+G PE + A+ I
Sbjct: 443 PPETPDSKV----RMVIITGPPEAQFKAQGRI 470
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 89/375 (23%), Positives = 157/375 (41%), Gaps = 74/375 (19%)
Query: 143 QILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKD---ASEP---THS--------CA 188
++LVP+ IIGK GATI+ + +T++ I V K+ A+E HS C
Sbjct: 199 RLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTPEGCSSACK 258
Query: 189 MEFDNFVLISGESEAVKKA------LFAISAIMYKFSPREDIPLETTVREAPPSIIIPS- 241
M + ++ E++ K A + A + + + +E L+ ++ I I S
Sbjct: 259 MILE---IMHKEAKDTKTADEVPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSL 315
Query: 242 -DVPIYPP-------GGL-----------------YPN--ADPILPSRSVPSILGAARVP 274
D+ +Y P G + Y N A L S +P L A V
Sbjct: 316 QDLTLYNPERTITVKGAIENCCRAEQEIMKKVREAYENDVAAMSLQSHLIPG-LNLAAVG 374
Query: 275 DLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIR 334
+ P TG + S + A + E +++V P +G +IGK G IK +
Sbjct: 375 LFPASSSAVPPPPSSVTGAAPYSSFMQAPEQE--MVQVFIPAQAVGAIIGKKGQHIKQLS 432
Query: 335 QASGAQIDVD--DTKDNRDECVITVTAIESPDDIKSMA---VEAVLLLQTKINDEDDDTV 389
+ + A I + +T D++ VI I P + + A + L + +++ +
Sbjct: 433 RFASASIKIAPPETPDSKVRMVI----ITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKL 488
Query: 390 TIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDE-LVEVVGEVGS 448
+ V + G +IGK G +NE++ T A+V + + P D ND+ +V+++G +
Sbjct: 489 ETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQTP---DENDQVIVKIIGHFYA 545
Query: 449 -------VRDALVQI 456
+RD L Q+
Sbjct: 546 SQMAQRKIRDILAQV 560
Score = 46.2 bits (108), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 95/248 (38%), Gaps = 67/248 (27%)
Query: 28 KDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKV---VDPFPGAKDRVV 84
KD K +E V +IL + +G +IGK G+ + + Q+T ++ + D +R +
Sbjct: 269 KDTKTADE-VPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYNPERTI 327
Query: 85 TIYSHVKDKEDVEVDDEFNDKEPLC-AAQDALLKVHAAIANAVANATDNDK--------- 134
T+ + E C A Q+ + KV A N VA +
Sbjct: 328 TVKGAI---------------ENCCRAEQEIMKKVREAYENDVAAMSLQSHLIPGLNLAA 372
Query: 135 ----------------------------KRKEKEECQILVPSSQSANIIGKAGATIKRLR 166
+ E+E Q+ +P+ IIGK G IK+L
Sbjct: 373 VGLFPASSSAVPPPPSSVTGAAPYSSFMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLS 432
Query: 167 SKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYK---FSPRED 223
SIK+ P + P M V+I+G EA KA I + + F P+E+
Sbjct: 433 RFASASIKIAPPET--PDSKVRM-----VIITGPPEAQFKAQGRIYGKLKEENFFGPKEE 485
Query: 224 IPLETTVR 231
+ LET +R
Sbjct: 486 VKLETHIR 493
Score = 42.7 bits (99), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 24/148 (16%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDP-FPGAKDRVVTIYSHVKDK 93
E + ++ P +G++IGK G+ I + + A +K+ P P +K R+V I
Sbjct: 404 EQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVII------- 456
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
+A K I + K + K E I VP+S +
Sbjct: 457 ---------------TGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGR 501
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+IGK G T+ L++ T + V P+D +
Sbjct: 502 VIGKGGKTVNELQNLTAAEV-VVPRDQT 528
>gi|403279506|ref|XP_003931289.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
isoform 1 [Saimiri boliviensis boliviensis]
Length = 577
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 147/332 (44%), Gaps = 47/332 (14%)
Query: 292 GLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRD 351
G + +G Q ++ +R+L P +G +IGK G TI++I + + ++IDV K+N
Sbjct: 180 GSPVAAGAPAKQQQVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDV-HRKENAG 238
Query: 352 ECVITVTAIESPDDIKSMAVEAVLLLQTKIND-EDDDTVTIRLLVSSKVIGCIIGKSGSI 410
++ +P+ S + ++ + D + D V +++L + +G +IGK G
Sbjct: 239 AAEKAISVHSTPEGCSSACKMILEIMHKEAKDTKTADEVPLKILAHNNFVGRLIGKEGRN 298
Query: 411 INEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDG 470
+ ++ + T+ + IS + + + V G + + A +I+ ++R+ D
Sbjct: 299 LKKVEQDTETKITISSLQDLTLYNP-ERTITVKGAIENCCRAEQEIMKKVREAYEND--- 354
Query: 471 SRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLS 530
V A + S L+P + + G+ SSS++ S
Sbjct: 355 -----VAAMSLQSH--------LIPGL-----------NLAAVGLFPASSSAVPPPPSSV 390
Query: 531 MGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATI--- 587
G +PY S + P ++V +PA AVG +IGK G ++ + + + A+I
Sbjct: 391 TGAAPYSS--------FMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIA 442
Query: 588 --EMSDSKSSRGDRVALISGTPEQKRAAENLI 617
E DSK R+ +I+G PE + A+ I
Sbjct: 443 PPETPDSKV----RMVIITGPPEAQFKAQGRI 470
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 89/375 (23%), Positives = 157/375 (41%), Gaps = 74/375 (19%)
Query: 143 QILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKD---ASEP---THS--------CA 188
++LVP+ IIGK GATI+ + +T++ I V K+ A+E HS C
Sbjct: 199 RLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTPEGCSSACK 258
Query: 189 MEFDNFVLISGESEAVKKA------LFAISAIMYKFSPREDIPLETTVREAPPSIIIPS- 241
M + ++ E++ K A + A + + + +E L+ ++ I I S
Sbjct: 259 MILE---IMHKEAKDTKTADEVPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSL 315
Query: 242 -DVPIYPP-------GGL-----------------YPN--ADPILPSRSVPSILGAARVP 274
D+ +Y P G + Y N A L S +P L A V
Sbjct: 316 QDLTLYNPERTITVKGAIENCCRAEQEIMKKVREAYENDVAAMSLQSHLIPG-LNLAAVG 374
Query: 275 DLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIR 334
+ P TG + S + A + E +++V P +G +IGK G IK +
Sbjct: 375 LFPASSSAVPPPPSSVTGAAPYSSFMQAPEQE--MVQVFIPAQAVGAIIGKKGQHIKQLS 432
Query: 335 QASGAQIDVD--DTKDNRDECVITVTAIESPDDIKSMA---VEAVLLLQTKINDEDDDTV 389
+ + A I + +T D++ VI I P + + A + L + +++ +
Sbjct: 433 RFASASIKIAPPETPDSKVRMVI----ITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKL 488
Query: 390 TIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDE-LVEVVGEVGS 448
+ V + G +IGK G +NE++ T A+V + + P D ND+ +V+++G +
Sbjct: 489 ETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQTP---DENDQVIVKIIGHFYA 545
Query: 449 -------VRDALVQI 456
+RD L Q+
Sbjct: 546 SQMAQRKIRDILAQV 560
Score = 46.2 bits (108), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 95/248 (38%), Gaps = 67/248 (27%)
Query: 28 KDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKV---VDPFPGAKDRVV 84
KD K +E V +IL + +G +IGK G+ + + Q+T ++ + D +R +
Sbjct: 269 KDTKTADE-VPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYNPERTI 327
Query: 85 TIYSHVKDKEDVEVDDEFNDKEPLC-AAQDALLKVHAAIANAVANATDNDK--------- 134
T+ + E C A Q+ + KV A N VA +
Sbjct: 328 TVKGAI---------------ENCCRAEQEIMKKVREAYENDVAAMSLQSHLIPGLNLAA 372
Query: 135 ----------------------------KRKEKEECQILVPSSQSANIIGKAGATIKRLR 166
+ E+E Q+ +P+ IIGK G IK+L
Sbjct: 373 VGLFPASSSAVPPPPSSVTGAAPYSSFMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLS 432
Query: 167 SKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYK---FSPRED 223
SIK+ P + P M V+I+G EA KA I + + F P+E+
Sbjct: 433 RFASASIKIAPPET--PDSKVRM-----VIITGPPEAQFKAQGRIYGKLKEENFFGPKEE 485
Query: 224 IPLETTVR 231
+ LET +R
Sbjct: 486 VKLETHIR 493
Score = 42.7 bits (99), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 24/148 (16%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDP-FPGAKDRVVTIYSHVKDK 93
E + ++ P +G++IGK G+ I + + A +K+ P P +K R+V I
Sbjct: 404 EQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVII------- 456
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
+A K I + K + K E I VP+S +
Sbjct: 457 ---------------TGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGR 501
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+IGK G T+ L++ T + V P+D +
Sbjct: 502 VIGKGGKTVNELQNLTAAEV-VVPRDQT 528
>gi|357123010|ref|XP_003563206.1| PREDICTED: RNA-binding protein Nova-1-like [Brachypodium
distachyon]
Length = 311
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 143/323 (44%), Gaps = 55/323 (17%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVI--TVTAIESPDDIK 367
+ L + G +IGK G +KS+ SGA+I++ +R + + T + + +
Sbjct: 29 VMFLVSHMEAGCIIGKAGSIVKSMESQSGARINI-----SRHDQLFPGTTSRVVLVSGLF 83
Query: 368 SMAVEAVLLLQTKINDEDDDTV----TIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVR 423
+ ++A+ L+ ++ + D + TI L+V S G +IGK G+ + I ++ A ++
Sbjct: 84 NQLMDAMELILERLVYQGDQVIDSKATIALVVPSVCCGALIGKGGATLKAITQKASAGIK 143
Query: 424 ISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYS 483
IS D +D LV + G + + A+ I+ +L +D L YS
Sbjct: 144 ISPQDNSY--GLHDRLVTITGSLDNQLRAIFLILSKLLEDVL----------------YS 185
Query: 484 SGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYS 543
I + ++ S P P+ Y + S +G + ++P S
Sbjct: 186 ----IPIARIVFSRYPASPVEY-ENVGSDEHVGRYQNKP----------NTPVRSPDKND 230
Query: 544 SKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMS---DSKSSRGDRV 600
+ Y L + + +G VIG+AG ++ I ++SGA I +S D + DR
Sbjct: 231 GQEY--------LTIAIADEHIGAVIGRAGRSINEITQVSGACIRISAKGDFIADTCDRE 282
Query: 601 ALISGTPEQKRAAENLIQAFIMA 623
+ISGTPE +AAE +I + A
Sbjct: 283 VVISGTPEAIQAAEAMIMHRVSA 305
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 135/335 (40%), Gaps = 80/335 (23%)
Query: 49 GSVIGKSGKVINSIRQETRARVKVV---DPFPGAKDRVVTI---YSHVKDKEDVEVDDEF 102
G +IGK+G ++ S+ ++ AR+ + FPG RVV + ++ + D ++ +
Sbjct: 39 GCIIGKAGSIVKSMESQSGARINISRHDQLFPGTTSRVVLVSGLFNQLMDAMELIL---- 94
Query: 103 NDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATI 162
E L D ++ A IA ++VPS +IGK GAT+
Sbjct: 95 ---ERLVYQGDQVIDSKATIA--------------------LVVPSVCCGALIGKGGATL 131
Query: 163 KRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPRE 222
K + K IK++P+D S H D V I+G + +A+F I + +
Sbjct: 132 KAITQKASAGIKISPQDNSYGLH------DRLVTITGSLDNQLRAIFLILSKL------- 178
Query: 223 DIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQGYADT 282
LE + P + I+ S P P + +V S R Y +
Sbjct: 179 ---LEDVLYSIPIARIVFSRYPASP-----------VEYENVGSDEHVGR------YQNK 218
Query: 283 GNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQID 342
NT PV S + E L I + IG VIG+ G +I I Q SGA I
Sbjct: 219 PNT-PVRSPDKN--------DGQEYLTIAI--ADEHIGAVIGRAGRSINEITQVSGACIR 267
Query: 343 VDDTKDN-RDECVITVTAIESPDDIKSMAVEAVLL 376
+ D D C V +P+ I+ A EA+++
Sbjct: 268 ISAKGDFIADTCDREVVISGTPEAIQ--AAEAMIM 300
>gi|301758860|ref|XP_002915252.1| PREDICTED: far upstream element-binding protein 3-like [Ailuropoda
melanoleuca]
Length = 572
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 139/341 (40%), Gaps = 42/341 (12%)
Query: 315 PFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDE--CVITVT--AIESPDDIKSMA 370
P +G +IG+GG I I+ SG +I + E CV+T T +IE +
Sbjct: 85 PDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPESIEQAKRLLGQI 144
Query: 371 VEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKAD-VRISKGDK 429
V+ ND D ++ +L+ + +G +IGK G I ++++RT V I G
Sbjct: 145 VDRCRNGPGFHNDIDGNSTIQEILIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPL 204
Query: 430 PKCADANDELVEVVGEVGSVRDALVQIILRLRDDA-LKDRDGSRNPPVGADHIYSS---- 484
P AD + +V R+ +++II R +D A + G VG I S
Sbjct: 205 PTGADKPLRITGDPFKVQQAREMVLEII-REKDQADFRGVRGDFGARVGGGSIEVSVPRF 263
Query: 485 --------------------GTGISMPP---LLP--SIPPVGPLGYDQRADSGSGIGMLS 519
G I P + P + +GP Q A +L+
Sbjct: 264 AVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPERAAQVMGPPDRCQHAAHVINELILT 323
Query: 520 SSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANI 579
+ G+G L++ +S GG+ + VPA+ G VIGK G N+ +I
Sbjct: 324 AQERDGFGGLAVARGRGRGRGDWSVGAPGGV---QEITYTVPADKCGLVIGKGGENIKSI 380
Query: 580 RKISGATIEMSDSKSSRGD---RVALISGTPEQKRAAENLI 617
+ SGA +E+ + D R+ I G P+Q A +LI
Sbjct: 381 NQQSGAHVELQRNPPPNTDPNLRIFTIRGIPQQIEVARHLI 421
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%)
Query: 554 LTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAA 613
+T E VP VG +IG+ G ++ I+ SG I+++ S +R +++GTPE A
Sbjct: 78 ITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPESIEQA 137
Query: 614 ENLI 617
+ L+
Sbjct: 138 KRLL 141
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 74/164 (45%), Gaps = 24/164 (14%)
Query: 44 PDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFN 103
PD ++G +IG+ G+ I+ I+ E+ ++++ G +R +
Sbjct: 85 PDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTG--------------- 129
Query: 104 DKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIK 163
E + A+ L ++ N D D +E IL+P+S+ +IGK G TIK
Sbjct: 130 TPESIEQAKRLLGQIVDRCRNGPGFHNDIDGNSTIQE---ILIPASKVGLVIGKGGETIK 186
Query: 164 RLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKA 207
+L+ +T + V +D PT + D + I+G+ V++A
Sbjct: 187 QLQERTGVKM-VMIQDGPLPTGA-----DKPLRITGDPFKVQQA 224
>gi|426347646|ref|XP_004041460.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
[Gorilla gorilla gorilla]
Length = 525
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 147/332 (44%), Gaps = 47/332 (14%)
Query: 292 GLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRD 351
G + +G Q ++ +R+L P +G +IGK G TI++I + + ++IDV K+N
Sbjct: 128 GSPVAAGAPAKQQQVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHR-KENAG 186
Query: 352 ECVITVTAIESPDDIKSMAVEAVLLLQTKIND-EDDDTVTIRLLVSSKVIGCIIGKSGSI 410
++ +P+ S + ++ + D + D V +++L + +G +IGK G
Sbjct: 187 AAEKAISVHSTPEGCSSACKMILEIMHKEAKDTKTADEVPLKILAHNNFVGRLIGKEGRN 246
Query: 411 INEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDG 470
+ ++ + T+ + IS + + + V G + + A +I+ ++R+ D
Sbjct: 247 LKKVEQDTETKITISSLQDLTLYNP-ERTITVKGAIENCCRAEQEIMKKVREAYEND--- 302
Query: 471 SRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLS 530
V A + S L+P + + G+ SSS++ S
Sbjct: 303 -----VAAMSLQSH--------LIPGL-----------NLAAVGLFPASSSAVPPPPSSV 338
Query: 531 MGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATI--- 587
G +PY S + P ++V +PA AVG +IGK G ++ + + + A+I
Sbjct: 339 TGAAPYSS--------FMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIA 390
Query: 588 --EMSDSKSSRGDRVALISGTPEQKRAAENLI 617
E DSK R+ +I+G PE + A+ I
Sbjct: 391 PPETPDSKV----RMVIITGPPEAQFKAQGRI 418
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 96/438 (21%), Positives = 175/438 (39%), Gaps = 97/438 (22%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKEDVEV 98
R+L P +G++IGK G I +I ++T++++ V GA ++ ++++S
Sbjct: 147 RLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHS---------- 196
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
E +A +L++ + D K ++ +IL ++ +IGK
Sbjct: 197 -----TPEGCSSACKMILEI--------MHKEAKDTKTADEVPLKILAHNNFVGRLIGKE 243
Query: 159 GATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESE-----AVKKALFAISA 213
G +K++ T T I ++ + L + E A++ A
Sbjct: 244 GRNLKKVEQDTETKITIS-------------SLQDLTLYNPERTITVKGAIENCCRAEQE 290
Query: 214 IMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPN--ADPILPSRSVPSILGAA 271
IM K VREA Y N A L S +P L A
Sbjct: 291 IMKK------------VREA------------------YENDVAAMSLQSHLIPG-LNLA 319
Query: 272 RVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIK 331
V + P TG + S + A + E +++V P +G +IGK G IK
Sbjct: 320 AVGLFPASSSAVPPPPSSVTGAAPYSSFMQAPEQE--MVQVFIPAQAVGAIIGKKGQHIK 377
Query: 332 SIRQASGAQIDVD--DTKDNRDECVITVTAIESPDDIKSMA---VEAVLLLQTKINDEDD 386
+ + + A I + +T D++ VI I P + + A + L + +++
Sbjct: 378 QLSRFASASIKIAPPETPDSKVRMVI----ITGPPEAQFKAQGRIYGKLKEENFFGPKEE 433
Query: 387 DTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDE-LVEVVGE 445
+ + V + G +IGK G +NE++ T A+V + + P D ND+ +V+++G
Sbjct: 434 VKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQTP---DENDQVIVKIIGH 490
Query: 446 VGS-------VRDALVQI 456
+ +RD L Q+
Sbjct: 491 FYASQMAQRKIRDILAQV 508
Score = 42.7 bits (99), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 24/148 (16%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDP-FPGAKDRVVTIYSHVKDK 93
E + ++ P +G++IGK G+ I + + A +K+ P P +K R+V I
Sbjct: 352 EQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVII------- 404
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
+A K I + K + K E I VP+S +
Sbjct: 405 ---------------TGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGR 449
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+IGK G T+ L++ T + V P+D +
Sbjct: 450 VIGKGGKTVNELQNLTAAEV-VVPRDQT 476
>gi|351705765|gb|EHB08684.1| Insulin-like growth factor 2 mRNA-binding protein 3 [Heterocephalus
glaber]
Length = 546
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 148/322 (45%), Gaps = 39/322 (12%)
Query: 298 GLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITV 357
G V + +L +R+L P +G +IGK G TI++I + + ++IDV K+N ++
Sbjct: 103 GSVSRQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHR-KENAGAAEKSI 161
Query: 358 TAIESPDDIKSMAVEAVLLLQTKIND-EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
T + +P+ + + ++ + D + + + +++L + +G +IGK G + +I +
Sbjct: 162 TILSTPEGTSAACKSILEIMHKEAQDIKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQ 221
Query: 417 RTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPV 476
T + IS + + + + V G V + A +I+ ++R+ D S N +
Sbjct: 222 DTDTKITISPLQELTLYNP-ERTITVKGSVETCAKAEEEIMKKIRESYEND-IASMN--L 277
Query: 477 GADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPY 536
A I G+++ L PP GM +S G S PY
Sbjct: 278 QAHLI----PGLNL-NALGLFPPTS--------------GMPPPTS----GPPSAMTPPY 314
Query: 537 GSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSR 596
++ T+ + +PA +VG +IGK G ++ + + +GA+I+++ +++
Sbjct: 315 PQFEQSETE---------TVHLFIPAPSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPD 365
Query: 597 GD-RVALISGTPEQKRAAENLI 617
R+ +I+G PE + A+ I
Sbjct: 366 AKVRMVIITGPPEAQFKAQGRI 387
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 90/414 (21%), Positives = 162/414 (39%), Gaps = 82/414 (19%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKEDVEV 98
R+L P +G++IGK G I +I ++T++++ V GA ++ +TI S
Sbjct: 116 RLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILS---------- 165
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
E AA ++L++ A D K E+ +IL ++ +IGK
Sbjct: 166 -----TPEGTSAACKSILEIMHKEA--------QDIKFTEEIPLKILAHNNFVGRLIGKE 212
Query: 159 GATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKF 218
G +K++ T T I ++P + + + G E KA IM K
Sbjct: 213 GRNLKKIEQDTDTKITISPLQ-----ELTLYNPERTITVKGSVETCAKAE---EEIMKK- 263
Query: 219 SPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQG 278
+RE+ + I ++ + GL NA + P S
Sbjct: 264 -----------IRESYENDIASMNLQAHLIPGLNLNALGLFPPTS--------------- 297
Query: 279 YADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASG 338
G P ++ QSE + + P +G +IGK G IK + + +G
Sbjct: 298 ----GMPPPTSGPPSAMTPPYPQFEQSETETVHLFIPAPSVGAIIGKQGQHIKQLSRFAG 353
Query: 339 AQIDV--DDTKDNRDECVITVTAIESPDDIKSMA---VEAVLLLQTKINDEDDDTVTIRL 393
A I + + D + VI I P + + A + + + ++ +++ + +
Sbjct: 354 ASIKIAPAEAPDAKVRMVI----ITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHI 409
Query: 394 LVSSKVIGCIIGKSGSI-------INEIRKRTKADVRISKGDKPKCADANDELV 440
V S G +IGK G +NE++ + A+V + + P D ND++V
Sbjct: 410 RVPSFAAGRVIGKGGKTASTSAKPVNELQNLSSAEVVVPRDQTP---DENDQVV 460
>gi|114666310|ref|XP_511944.2| PREDICTED: insulin-like growth factor 2 mRNA binding protein 1
isoform 2 [Pan troglodytes]
gi|397477448|ref|XP_003810082.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
isoform 1 [Pan paniscus]
Length = 577
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 147/332 (44%), Gaps = 47/332 (14%)
Query: 292 GLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRD 351
G + +G Q ++ +R+L P +G +IGK G TI++I + + ++IDV K+N
Sbjct: 180 GSPVAAGAPAKQQQVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDV-HRKENAG 238
Query: 352 ECVITVTAIESPDDIKSMAVEAVLLLQTKIND-EDDDTVTIRLLVSSKVIGCIIGKSGSI 410
++ +P+ S + ++ + D + D V +++L + +G +IGK G
Sbjct: 239 AAEKAISVHSTPEGCSSACKMILEIMHKEAKDTKTADEVPLKILAHNNFVGRLIGKEGRN 298
Query: 411 INEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDG 470
+ ++ + T+ + IS + + + V G + + A +I+ ++R+ D
Sbjct: 299 LKKVEQDTETKITISSLQDLTLYNP-ERTITVKGAIENCCRAEQEIMKKVREAYEND--- 354
Query: 471 SRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLS 530
V A + S L+P + + G+ SSS++ S
Sbjct: 355 -----VAAMSLQSH--------LIPGL-----------NLAAVGLFPASSSAVPPPPSSV 390
Query: 531 MGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATI--- 587
G +PY S + P ++V +PA AVG +IGK G ++ + + + A+I
Sbjct: 391 TGAAPYSS--------FMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIA 442
Query: 588 --EMSDSKSSRGDRVALISGTPEQKRAAENLI 617
E DSK R+ +I+G PE + A+ I
Sbjct: 443 PPETPDSKV----RMVIITGPPEAQFKAQGRI 470
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 89/375 (23%), Positives = 157/375 (41%), Gaps = 74/375 (19%)
Query: 143 QILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKD---ASEP---THS--------CA 188
++LVP+ IIGK GATI+ + +T++ I V K+ A+E HS C
Sbjct: 199 RLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTPEGCSSACK 258
Query: 189 MEFDNFVLISGESEAVKKA------LFAISAIMYKFSPREDIPLETTVREAPPSIIIPS- 241
M + ++ E++ K A + A + + + +E L+ ++ I I S
Sbjct: 259 MILE---IMHKEAKDTKTADEVPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSL 315
Query: 242 -DVPIYPP-------GGL-----------------YPN--ADPILPSRSVPSILGAARVP 274
D+ +Y P G + Y N A L S +P L A V
Sbjct: 316 QDLTLYNPERTITVKGAIENCCRAEQEIMKKVREAYENDVAAMSLQSHLIPG-LNLAAVG 374
Query: 275 DLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIR 334
+ P TG + S + A + E +++V P +G +IGK G IK +
Sbjct: 375 LFPASSSAVPPPPSSVTGAAPYSSFMQAPEQE--MVQVFIPAQAVGAIIGKKGQHIKQLS 432
Query: 335 QASGAQIDVD--DTKDNRDECVITVTAIESPDDIKSMA---VEAVLLLQTKINDEDDDTV 389
+ + A I + +T D++ VI I P + + A + L + +++ +
Sbjct: 433 RFASASIKIAPPETPDSKVRMVI----ITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKL 488
Query: 390 TIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDE-LVEVVGEVGS 448
+ V + G +IGK G +NE++ T A+V + + P D ND+ +V+++G +
Sbjct: 489 ETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQTP---DENDQVIVKIIGHFYA 545
Query: 449 -------VRDALVQI 456
+RD L Q+
Sbjct: 546 SQMAQRKIRDILAQV 560
Score = 46.2 bits (108), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 95/248 (38%), Gaps = 67/248 (27%)
Query: 28 KDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKV---VDPFPGAKDRVV 84
KD K +E V +IL + +G +IGK G+ + + Q+T ++ + D +R +
Sbjct: 269 KDTKTADE-VPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYNPERTI 327
Query: 85 TIYSHVKDKEDVEVDDEFNDKEPLC-AAQDALLKVHAAIANAVANATDNDK--------- 134
T+ + E C A Q+ + KV A N VA +
Sbjct: 328 TVKGAI---------------ENCCRAEQEIMKKVREAYENDVAAMSLQSHLIPGLNLAA 372
Query: 135 ----------------------------KRKEKEECQILVPSSQSANIIGKAGATIKRLR 166
+ E+E Q+ +P+ IIGK G IK+L
Sbjct: 373 VGLFPASSSAVPPPPSSVTGAAPYSSFMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLS 432
Query: 167 SKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYK---FSPRED 223
SIK+ P + P M V+I+G EA KA I + + F P+E+
Sbjct: 433 RFASASIKIAPPET--PDSKVRM-----VIITGPPEAQFKAQGRIYGKLKEENFFGPKEE 485
Query: 224 IPLETTVR 231
+ LET +R
Sbjct: 486 VKLETHIR 493
Score = 42.7 bits (99), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 24/148 (16%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDP-FPGAKDRVVTIYSHVKDK 93
E + ++ P +G++IGK G+ I + + A +K+ P P +K R+V I
Sbjct: 404 EQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVII------- 456
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
+A K I + K + K E I VP+S +
Sbjct: 457 ---------------TGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGR 501
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+IGK G T+ L++ T + V P+D +
Sbjct: 502 VIGKGGKTVNELQNLTAAEV-VVPRDQT 528
>gi|327274617|ref|XP_003222073.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
[Anolis carolinensis]
Length = 584
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/315 (21%), Positives = 143/315 (45%), Gaps = 40/315 (12%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
E+ +R+L P +G +IGK G TI++I + + ++ID+ K+N +T +P+
Sbjct: 196 EVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDI-HRKENAGAAEKPITIHSTPEGC 254
Query: 367 KSMAVEAVLLLQTKINDED-DDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRIS 425
S + ++Q + D + + +++L + +G +IGK G + +I + T + IS
Sbjct: 255 SSACKIIMEIMQKEAQDTKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITIS 314
Query: 426 KGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSG 485
+ + + V G + + A +I+ ++R+ D + A ++ +
Sbjct: 315 PLQDLTLYNP-ERTITVKGSIETCAKAEEEIMKKIRESYEND--------IAAMNLQAH- 364
Query: 486 TGISMPPLLP--SIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYS 543
L+P ++ +G +G+ S++S Y P+G
Sbjct: 365 -------LIPGLNLNALGLFPPSSSGIPPPSVGVASAASASSY-------PPFGQQ---- 406
Query: 544 SKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGD-RVAL 602
P T+ + +PA AVG +IGK G ++ + + +GA+I+++ ++ R+ +
Sbjct: 407 -------PESETVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPAEGPEAKLRMVI 459
Query: 603 ISGTPEQKRAAENLI 617
I+G PE + A+ I
Sbjct: 460 ITGPPEAQFKAQGRI 474
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 64/141 (45%), Gaps = 8/141 (5%)
Query: 303 SQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIES 362
Q E + + P +G +IGK G IK + + +GA I + + E + + I
Sbjct: 405 QQPESETVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPAEG--PEAKLRMVIITG 462
Query: 363 PDDIKSMA---VEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
P + + A + L + +++ + + V S G +IGK G +NE++ T
Sbjct: 463 PPEAQFKAQGRIYGKLKEENFFGPKEEVKLEAHIKVPSYAAGRVIGKGGKTVNELQNLTS 522
Query: 420 ADVRISKGDKPKCADANDELV 440
A+V + + P D ND++V
Sbjct: 523 AEVVVPRDQTP---DENDQVV 540
Score = 40.0 bits (92), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 58/148 (39%), Gaps = 24/148 (16%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPF-PGAKDRVVTIYSHVKDK 93
ES + P +G++IGK G+ I + + A +K+ P AK R+V I
Sbjct: 408 ESETVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPAEGPEAKLRMVII------- 460
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
+A K I + K + K E I VPS +
Sbjct: 461 ---------------TGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLEAHIKVPSYAAGR 505
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+IGK G T+ L++ T + V P+D +
Sbjct: 506 VIGKGGKTVNELQNLTSAEV-VVPRDQT 532
Score = 39.7 bits (91), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 10/100 (10%)
Query: 135 KRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNF 194
++ E E + +P+ IIGK G IK+L SIK+ P + E
Sbjct: 405 QQPESETVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPAEGPEAKL-------RM 457
Query: 195 VLISGESEAVKKALFAISAIMYK---FSPREDIPLETTVR 231
V+I+G EA KA I + + F P+E++ LE ++
Sbjct: 458 VIITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLEAHIK 497
>gi|410952454|ref|XP_003982895.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
isoform 1 [Felis catus]
Length = 579
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 144/313 (46%), Gaps = 39/313 (12%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
+L +R+L P +G +IGK G TI++I + + ++IDV K+N ++T + +P+
Sbjct: 195 DLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDV-HRKENAGAAEKSITILSTPEGT 253
Query: 367 KSMAVEAVLLLQTKIND-EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRIS 425
+ + ++ + D + + + +++L + +G +IGK G + +I + T + IS
Sbjct: 254 SAACKSILEIMHKEAQDIKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITIS 313
Query: 426 KGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSG 485
+ + + + V G V + A +I+ ++R+ D S N + A I G
Sbjct: 314 PLQELTLYNP-ERTITVKGNVETCAKAEEEIMKKIRESYEND-IASMN--LQAHLI--PG 367
Query: 486 TGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSK 545
++ L PP GM +S G S PY ++
Sbjct: 368 LNLNA---LGLFPPTS--------------GMPPPTS----GPPSAMTPPYPQFEQSETE 406
Query: 546 LYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGD-RVALIS 604
T+ + +PA +VG +IGK G ++ + + +GA+I+++ +++ R+ +I+
Sbjct: 407 ---------TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIIT 457
Query: 605 GTPEQKRAAENLI 617
G PE + A+ I
Sbjct: 458 GPPEAQFKAQGRI 470
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 94/441 (21%), Positives = 176/441 (39%), Gaps = 83/441 (18%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKEDVEV 98
R+L P +G++IGK G I +I ++T++++ V GA ++ +TI S
Sbjct: 199 RLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILS---------- 248
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
E AA ++L++ + D K E+ +IL ++ +IGK
Sbjct: 249 -----TPEGTSAACKSILEI--------MHKEAQDIKFTEEIPLKILAHNNFVGRLIGKE 295
Query: 159 GATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKF 218
G +K++ T T I ++P + + + G E KA IM K
Sbjct: 296 GRNLKKIEQDTDTKITISPLQ-----ELTLYNPERTITVKGNVETCAKAE---EEIMKK- 346
Query: 219 SPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQG 278
+RE+ + I ++ + GL NA + P S
Sbjct: 347 -----------IRESYENDIASMNLQAHLIPGLNLNALGLFPPTS--------------- 380
Query: 279 YADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASG 338
G P ++ QSE + + P +G +IGK G IK + + +G
Sbjct: 381 ----GMPPPTSGPPSAMTPPYPQFEQSETETVHLFIPALSVGAIIGKQGQHIKQLSRFAG 436
Query: 339 AQIDV--DDTKDNRDECVITVTAIESPDDIKSMA---VEAVLLLQTKINDEDDDTVTIRL 393
A I + + D + VI I P + + A + + + ++ +++ + +
Sbjct: 437 ASIKIAPAEAPDAKVRMVI----ITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHI 492
Query: 394 LVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDE-LVEVVGEVGS---- 448
V S G +IGK G +NE++ + A+V + + P D ND+ +V++ G +
Sbjct: 493 RVPSFAAGRVIGKGGKTVNELQNLSSAEVVVPRDQTP---DENDQVVVKITGHFYACQVA 549
Query: 449 ---VRDALVQIILRLRDDALK 466
+++ L Q+ + AL+
Sbjct: 550 QRKIQEILTQVKQHQQQKALQ 570
>gi|73966275|ref|XP_548184.2| PREDICTED: insulin-like growth factor 2 mRNA binding protein 1
isoform 2 [Canis lupus familiaris]
gi|301762950|ref|XP_002916873.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Ailuropoda melanoleuca]
gi|410980809|ref|XP_003996768.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
isoform 1 [Felis catus]
gi|281344391|gb|EFB19975.1| hypothetical protein PANDA_005026 [Ailuropoda melanoleuca]
Length = 577
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 147/332 (44%), Gaps = 47/332 (14%)
Query: 292 GLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRD 351
G + +G Q ++ +R+L P +G +IGK G TI++I + + ++IDV K+N
Sbjct: 180 GSPVAAGAPAKQQQVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDV-HRKENAG 238
Query: 352 ECVITVTAIESPDDIKSMAVEAVLLLQTKIND-EDDDTVTIRLLVSSKVIGCIIGKSGSI 410
++ +P+ S + ++ + D + D V +++L + +G +IGK G
Sbjct: 239 AAEKAISVHSTPEGCSSACKMILEIMHKEAKDTKTADEVPLKILAHNNFVGRLIGKEGRN 298
Query: 411 INEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDG 470
+ ++ + T+ + IS + + + V G + + A +I+ ++R+ D
Sbjct: 299 LKKVEQDTETKITISSLQDLTLYNP-ERTITVKGAIENCCRAEQEIMKKVREAYEND--- 354
Query: 471 SRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLS 530
V A + S L+P + + G+ SSS++ S
Sbjct: 355 -----VAAMSLQSH--------LIPGL-----------NLAAVGLFPASSSAVPPPPSSV 390
Query: 531 MGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATI--- 587
G +PY S + P ++V +PA AVG +IGK G ++ + + + A+I
Sbjct: 391 TGAAPYSS--------FMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIA 442
Query: 588 --EMSDSKSSRGDRVALISGTPEQKRAAENLI 617
E DSK R+ +I+G PE + A+ I
Sbjct: 443 PPETPDSKV----RMVIITGPPEAQFKAQGRI 470
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 89/375 (23%), Positives = 157/375 (41%), Gaps = 74/375 (19%)
Query: 143 QILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKD---ASEP---THS--------CA 188
++LVP+ IIGK GATI+ + +T++ I V K+ A+E HS C
Sbjct: 199 RLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTPEGCSSACK 258
Query: 189 MEFDNFVLISGESEAVKKA------LFAISAIMYKFSPREDIPLETTVREAPPSIIIPS- 241
M + ++ E++ K A + A + + + +E L+ ++ I I S
Sbjct: 259 MILE---IMHKEAKDTKTADEVPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSL 315
Query: 242 -DVPIYPP-------GGL-----------------YPN--ADPILPSRSVPSILGAARVP 274
D+ +Y P G + Y N A L S +P L A V
Sbjct: 316 QDLTLYNPERTITVKGAIENCCRAEQEIMKKVREAYENDVAAMSLQSHLIPG-LNLAAVG 374
Query: 275 DLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIR 334
+ P TG + S + A + E +++V P +G +IGK G IK +
Sbjct: 375 LFPASSSAVPPPPSSVTGAAPYSSFMQAPEQE--MVQVFIPAQAVGAIIGKKGQHIKQLS 432
Query: 335 QASGAQIDVD--DTKDNRDECVITVTAIESPDDIKSMA---VEAVLLLQTKINDEDDDTV 389
+ + A I + +T D++ VI I P + + A + L + +++ +
Sbjct: 433 RFASASIKIAPPETPDSKVRMVI----ITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKL 488
Query: 390 TIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDE-LVEVVGEVGS 448
+ V + G +IGK G +NE++ T A+V + + P D ND+ +V+++G +
Sbjct: 489 ETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQTP---DENDQVIVKIIGHFYA 545
Query: 449 -------VRDALVQI 456
+RD L Q+
Sbjct: 546 SQMAQRKIRDILAQV 560
Score = 46.2 bits (108), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 95/248 (38%), Gaps = 67/248 (27%)
Query: 28 KDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKV---VDPFPGAKDRVV 84
KD K +E V +IL + +G +IGK G+ + + Q+T ++ + D +R +
Sbjct: 269 KDTKTADE-VPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYNPERTI 327
Query: 85 TIYSHVKDKEDVEVDDEFNDKEPLC-AAQDALLKVHAAIANAVANATDNDK--------- 134
T+ + E C A Q+ + KV A N VA +
Sbjct: 328 TVKGAI---------------ENCCRAEQEIMKKVREAYENDVAAMSLQSHLIPGLNLAA 372
Query: 135 ----------------------------KRKEKEECQILVPSSQSANIIGKAGATIKRLR 166
+ E+E Q+ +P+ IIGK G IK+L
Sbjct: 373 VGLFPASSSAVPPPPSSVTGAAPYSSFMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLS 432
Query: 167 SKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYK---FSPRED 223
SIK+ P + P M V+I+G EA KA I + + F P+E+
Sbjct: 433 RFASASIKIAPPET--PDSKVRM-----VIITGPPEAQFKAQGRIYGKLKEENFFGPKEE 485
Query: 224 IPLETTVR 231
+ LET +R
Sbjct: 486 VKLETHIR 493
Score = 42.7 bits (99), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 24/148 (16%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDP-FPGAKDRVVTIYSHVKDK 93
E + ++ P +G++IGK G+ I + + A +K+ P P +K R+V I
Sbjct: 404 EQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVII------- 456
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
+A K I + K + K E I VP+S +
Sbjct: 457 ---------------TGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGR 501
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+IGK G T+ L++ T + V P+D +
Sbjct: 502 VIGKGGKTVNELQNLTAAEV-VVPRDQT 528
>gi|402906002|ref|XP_003915796.1| PREDICTED: RNA-binding protein Nova-2 [Papio anubis]
Length = 618
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 86/175 (49%), Gaps = 21/175 (12%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD-----NRDECVITVTAIE 361
E ++VL P G +IGKGG TI +++ +GA I + +KD C++ TA E
Sbjct: 158 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTA-E 216
Query: 362 SPDDIKSMAVEAVL-------------LLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSG 408
+ + + S E V +LQ + D +L+V + G IIGK G
Sbjct: 217 ALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGG 276
Query: 409 SIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDD 463
+ + + +++ A V++S+ KP+ + + +V V GE V A+ I+ ++++D
Sbjct: 277 ATVKAVMEQSGAWVQLSQ--KPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQED 329
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 87/181 (48%), Gaps = 17/181 (9%)
Query: 34 EESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV---DPFPGAKDRVVTIYSHV 90
E ++L P GS+IGK G+ I +++ET A +K+ D +PG +RV +
Sbjct: 156 EGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQG-- 213
Query: 91 KDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQ 150
E + F E + A+ K + N + T + R ++ +++VP+S
Sbjct: 214 -TAEALNAVHSF-IAEKVREIPQAMTKPE--VVNILQPQTTMNPDR--AKQAKLIVPNST 267
Query: 151 SANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFA 210
+ IIGK GAT+K + ++ ++++ K ++ + V +SGE E V KA+ A
Sbjct: 268 AGLIIGKGGATVKAVMEQSGAWVQLSQKP-----EGINLQ-ERVVTVSGEPEQVHKAVSA 321
Query: 211 I 211
I
Sbjct: 322 I 322
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 42/69 (60%), Gaps = 7/69 (10%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSK---SSRGDRVALISGTPEQKRA 612
L+VL+P+ A G +IGK G + ++K +GATI++S SK +RV L+ GT E
Sbjct: 161 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAE---- 216
Query: 613 AENLIQAFI 621
A N + +FI
Sbjct: 217 ALNAVHSFI 225
Score = 42.4 bits (98), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 5/66 (7%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDS----KSSRGDRVALISGTPEQKR 611
+E+ VP N VG ++GK G L ++++GA I++S +R RV I+G+P +
Sbjct: 535 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVT-ITGSPAATQ 593
Query: 612 AAENLI 617
AA+ LI
Sbjct: 594 AAQYLI 599
>gi|281349495|gb|EFB25079.1| hypothetical protein PANDA_003250 [Ailuropoda melanoleuca]
Length = 571
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 139/341 (40%), Gaps = 42/341 (12%)
Query: 315 PFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDE--CVITVT--AIESPDDIKSMA 370
P +G +IG+GG I I+ SG +I + E CV+T T +IE +
Sbjct: 85 PDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPESIEQAKRLLGQI 144
Query: 371 VEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKAD-VRISKGDK 429
V+ ND D ++ +L+ + +G +IGK G I ++++RT V I G
Sbjct: 145 VDRCRNGPGFHNDIDGNSTIQEILIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPL 204
Query: 430 PKCADANDELVEVVGEVGSVRDALVQIILRLRDDA-LKDRDGSRNPPVGADHIYSS---- 484
P AD + +V R+ +++II R +D A + G VG I S
Sbjct: 205 PTGADKPLRITGDPFKVQQAREMVLEII-REKDQADFRGVRGDFGARVGGGSIEVSVPRF 263
Query: 485 --------------------GTGISMPP---LLP--SIPPVGPLGYDQRADSGSGIGMLS 519
G I P + P + +GP Q A +L+
Sbjct: 264 AVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPERAAQVMGPPDRCQHAAHVINELILT 323
Query: 520 SSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANI 579
+ G+G L++ +S GG+ + VPA+ G VIGK G N+ +I
Sbjct: 324 AQERDGFGGLAVARGRGRGRGDWSVGAPGGV---QEITYTVPADKCGLVIGKGGENIKSI 380
Query: 580 RKISGATIEMSDSKSSRGD---RVALISGTPEQKRAAENLI 617
+ SGA +E+ + D R+ I G P+Q A +LI
Sbjct: 381 NQQSGAHVELQRNPPPNTDPNLRIFTIRGIPQQIEVARHLI 421
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%)
Query: 554 LTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAA 613
+T E VP VG +IG+ G ++ I+ SG I+++ S +R +++GTPE A
Sbjct: 78 ITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPESIEQA 137
Query: 614 ENLI 617
+ L+
Sbjct: 138 KRLL 141
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 74/164 (45%), Gaps = 24/164 (14%)
Query: 44 PDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFN 103
PD ++G +IG+ G+ I+ I+ E+ ++++ G +R +
Sbjct: 85 PDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTG--------------- 129
Query: 104 DKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIK 163
E + A+ L ++ N D D +E IL+P+S+ +IGK G TIK
Sbjct: 130 TPESIEQAKRLLGQIVDRCRNGPGFHNDIDGNSTIQE---ILIPASKVGLVIGKGGETIK 186
Query: 164 RLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKA 207
+L+ +T + V +D PT + D + I+G+ V++A
Sbjct: 187 QLQERTGVKM-VMIQDGPLPTGA-----DKPLRITGDPFKVQQA 224
>gi|440910511|gb|ELR60305.1| Insulin-like growth factor 2 mRNA-binding protein 1 [Bos grunniens
mutus]
Length = 577
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 147/332 (44%), Gaps = 47/332 (14%)
Query: 292 GLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRD 351
G + +G Q ++ +R+L P +G +IGK G TI++I + + ++IDV K+N
Sbjct: 180 GSPVAAGAPAKQQQVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDV-HRKENAG 238
Query: 352 ECVITVTAIESPDDIKSMAVEAVLLLQTKIND-EDDDTVTIRLLVSSKVIGCIIGKSGSI 410
++ +P+ S + ++ + D + D V +++L + +G +IGK G
Sbjct: 239 AAEKAISVHSTPEGCSSACKMILEIMHKEAKDTKTADEVPLKILAHNNFVGRLIGKEGRN 298
Query: 411 INEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDG 470
+ ++ + T+ + IS + + + V G + + A +I+ ++R+ D
Sbjct: 299 LKKVEQDTETKITISSLQDLTLYNP-ERTITVKGAIENCCRAEQEIMKKVREAYEND--- 354
Query: 471 SRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLS 530
V A + S L+P + + G+ SSS++ S
Sbjct: 355 -----VAAMSLQSH--------LIPGL-----------NLAAVGLFPASSSAVPPPPSSV 390
Query: 531 MGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATI--- 587
G +PY S + P ++V +PA AVG +IGK G ++ + + + A+I
Sbjct: 391 TGAAPYSS--------FMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIA 442
Query: 588 --EMSDSKSSRGDRVALISGTPEQKRAAENLI 617
E DSK R+ +I+G PE + A+ I
Sbjct: 443 PPETPDSKV----RMVIITGPPEAQFKAQGRI 470
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 89/375 (23%), Positives = 157/375 (41%), Gaps = 74/375 (19%)
Query: 143 QILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKD---ASEP---THS--------CA 188
++LVP+ IIGK GATI+ + +T++ I V K+ A+E HS C
Sbjct: 199 RLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTPEGCSSACK 258
Query: 189 MEFDNFVLISGESEAVKKA------LFAISAIMYKFSPREDIPLETTVREAPPSIIIPS- 241
M + ++ E++ K A + A + + + +E L+ ++ I I S
Sbjct: 259 MILE---IMHKEAKDTKTADEVPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSL 315
Query: 242 -DVPIYPP-------GGL-----------------YPN--ADPILPSRSVPSILGAARVP 274
D+ +Y P G + Y N A L S +P L A V
Sbjct: 316 QDLTLYNPERTITVKGAIENCCRAEQEIMKKVREAYENDVAAMSLQSHLIPG-LNLAAVG 374
Query: 275 DLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIR 334
+ P TG + S + A + E +++V P +G +IGK G IK +
Sbjct: 375 LFPASSSAVPPPPSSVTGAAPYSSFMQAPEQE--MVQVFIPAQAVGAIIGKKGQHIKQLS 432
Query: 335 QASGAQIDVD--DTKDNRDECVITVTAIESPDDIKSMA---VEAVLLLQTKINDEDDDTV 389
+ + A I + +T D++ VI I P + + A + L + +++ +
Sbjct: 433 RFASASIKIAPPETPDSKVRMVI----ITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKL 488
Query: 390 TIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDE-LVEVVGEVGS 448
+ V + G +IGK G +NE++ T A+V + + P D ND+ +V+++G +
Sbjct: 489 ETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQTP---DENDQVIVKIIGHFYA 545
Query: 449 -------VRDALVQI 456
+RD L Q+
Sbjct: 546 SQMAQRKIRDILAQV 560
Score = 46.2 bits (108), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 95/248 (38%), Gaps = 67/248 (27%)
Query: 28 KDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKV---VDPFPGAKDRVV 84
KD K +E V +IL + +G +IGK G+ + + Q+T ++ + D +R +
Sbjct: 269 KDTKTADE-VPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYNPERTI 327
Query: 85 TIYSHVKDKEDVEVDDEFNDKEPLC-AAQDALLKVHAAIANAVANATDNDK--------- 134
T+ + E C A Q+ + KV A N VA +
Sbjct: 328 TVKGAI---------------ENCCRAEQEIMKKVREAYENDVAAMSLQSHLIPGLNLAA 372
Query: 135 ----------------------------KRKEKEECQILVPSSQSANIIGKAGATIKRLR 166
+ E+E Q+ +P+ IIGK G IK+L
Sbjct: 373 VGLFPASSSAVPPPPSSVTGAAPYSSFMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLS 432
Query: 167 SKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYK---FSPRED 223
SIK+ P + P M V+I+G EA KA I + + F P+E+
Sbjct: 433 RFASASIKIAPPET--PDSKVRM-----VIITGPPEAQFKAQGRIYGKLKEENFFGPKEE 485
Query: 224 IPLETTVR 231
+ LET +R
Sbjct: 486 VKLETHIR 493
Score = 42.7 bits (99), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 24/148 (16%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDP-FPGAKDRVVTIYSHVKDK 93
E + ++ P +G++IGK G+ I + + A +K+ P P +K R+V I
Sbjct: 404 EQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVII------- 456
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
+A K I + K + K E I VP+S +
Sbjct: 457 ---------------TGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGR 501
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+IGK G T+ L++ T + V P+D +
Sbjct: 502 VIGKGGKTVNELQNLTAAEV-VVPRDQT 528
>gi|363808250|ref|NP_001242748.1| uncharacterized protein LOC100819415 [Glycine max]
gi|255637181|gb|ACU18921.1| unknown [Glycine max]
Length = 318
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 117/291 (40%), Gaps = 43/291 (14%)
Query: 105 KEPLCA---AQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGAT 161
+EP C+ A D LL+VH + N + D+ ++LV +Q+ ++IGK G+T
Sbjct: 6 EEPDCSIPPAVDVLLRVHKQVVNVDPHPADSASGAGRPVVTRLLVADTQAGSLIGKQGST 65
Query: 162 IKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKF--- 218
IK + T +I++ SE A+ D+ V I GES V KA+ ++ + KF
Sbjct: 66 IKSFQDATGCNIRIL---GSEHLPVFALRDDSVVEIQGESSGVHKAVELVAIHLRKFLVD 122
Query: 219 ----------SPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYP-------------NA 255
R D+ + V PP P PP G N
Sbjct: 123 RSIVVVFETQMQRPDVRVNQNVPPGPP------HQPWGPPQGFQAPGPGSGGGPVFPPNP 176
Query: 256 DPILPSRSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVL-- 313
+ PS + + A +P + + G P Y S+ A + +V +V
Sbjct: 177 QYMPPSHNYDNYYPPADLPPMDKHLHQGPA-PAYVRDASMGIHSSSAQPQQSVVTKVTQH 235
Query: 314 --CPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIES 362
P + VIG G I IR+ASGA I + +T+ E + ++ S
Sbjct: 236 MQIPLSYADAVIGASGANISYIRRASGASITIQETRGVPGEMTVEISGTAS 286
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 42/67 (62%)
Query: 554 LTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAA 613
+T + +P + VIG +G+N++ IR+ SGA+I + +++ G+ ISGT Q +AA
Sbjct: 232 VTQHMQIPLSYADAVIGASGANISYIRRASGASITIQETRGVPGEMTVEISGTASQIQAA 291
Query: 614 ENLIQAF 620
+ L+Q F
Sbjct: 292 QQLVQVF 298
>gi|452989355|gb|EME89110.1| hypothetical protein MYCFIDRAFT_71441 [Pseudocercospora fijiensis
CIRAD86]
Length = 360
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 144/333 (43%), Gaps = 53/333 (15%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT-AIESPDD 365
+L +R + + G +IGK G + +R +G + V + V+TVT A+ D
Sbjct: 40 QLTLRAIVTSKEAGVIIGKAGQNVADLRDKTGVRAGVSKVVPGVHDRVLTVTGALTGISD 99
Query: 366 IKSMAVEAVL--LLQTKIND--EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKAD 421
+ ++++ + Q + + +T IRLL+S +G IIG+ G I +I+ +
Sbjct: 100 AYGLVADSLVKGVPQMGMGGVVGNPNTHPIRLLISHNQMGTIIGRQGLKIKQIQDASGVR 159
Query: 422 VRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHI 481
+ K P+ + + +VEV G V+ A+ +I L DD + +
Sbjct: 160 MVAQKEMLPQ---STERIVEVQGTPEGVQKAVWEIGKCLIDDEQRGY---------GTVL 207
Query: 482 YSSGT----GISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGS-LSMGDSPY 536
YS G PPL +G+ G S + G G+ + G SP
Sbjct: 208 YSPAVRVQGGAPAPPL---------------NGTGASYGAPRSYNRTGNGADFTGGQSP- 251
Query: 537 GSMSSYSSKLYG---GLPPP--------LTLEVLVPANAVGKVIGKAGSNLANIRKISGA 585
SSY + G G PPP T + +PA+ VG +IG+ GS ++ IRK SGA
Sbjct: 252 ---SSYPPRRNGPSDGGPPPRPEDGEDIQTQNISIPADMVGCIIGRGGSKISEIRKSSGA 308
Query: 586 TIEMSDS-KSSRGDRVALISGTPEQKRAAENLI 617
I ++ + G+R+ I+G P A L+
Sbjct: 309 RISIAKAPHDETGERMFTITGGPAANEKALYLL 341
>gi|348562599|ref|XP_003467097.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Cavia porcellus]
Length = 599
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 146/332 (43%), Gaps = 48/332 (14%)
Query: 292 GLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRD 351
G + +G Q ++ +R+L P +G +IGK G TI++I + + ++IDV K+N
Sbjct: 203 GSPVAAGAPAKQQQVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDV-HRKENAG 261
Query: 352 ECVITVTAIESPDDIKSMAVEAVLLLQTKIND-EDDDTVTIRLLVSSKVIGCIIGKSGSI 410
++ +P+ S + ++ + D + D V +++L + +G +IGK G
Sbjct: 262 AAEKAISVHSTPEGCSSACRMILEIMHKEAKDTKTADEVPLKILAHNNFVGRLIGKEGRN 321
Query: 411 INEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDG 470
+ ++ + T + IS + + + V G + + A +I+ ++R+ D
Sbjct: 322 LKKVEQDTDTKITISSLQDLTLYNP-ERTITVKGAIENCCRAEQEIMKKVREAYEND--- 377
Query: 471 SRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLS 530
V A + S L+P + + G+ SSS++ S
Sbjct: 378 -----VAAMSLQSH--------LIPGL-----------NLAAVGLFPASSSAVPPPPSSV 413
Query: 531 MGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATI--- 587
G +PY S + P ++V +PA AVG +IGK G ++ + + + A+I
Sbjct: 414 TGAAPYSSFMA---------PEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIA 464
Query: 588 --EMSDSKSSRGDRVALISGTPEQKRAAENLI 617
E DSK R+ +I+G PE + A+ I
Sbjct: 465 PPETPDSKV----RMVIITGPPEAQFKAQGRI 492
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 95/438 (21%), Positives = 173/438 (39%), Gaps = 98/438 (22%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKEDVEV 98
R+L P +G++IGK G I +I ++T++++ V GA ++ ++++S
Sbjct: 222 RLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHS---------- 271
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
E +A +L++ + D K ++ +IL ++ +IGK
Sbjct: 272 -----TPEGCSSACRMILEI--------MHKEAKDTKTADEVPLKILAHNNFVGRLIGKE 318
Query: 159 GATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESE-----AVKKALFAISA 213
G +K++ T T I ++ + L + E A++ A
Sbjct: 319 GRNLKKVEQDTDTKITIS-------------SLQDLTLYNPERTITVKGAIENCCRAEQE 365
Query: 214 IMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPN--ADPILPSRSVPSILGAA 271
IM K VREA Y N A L S +P L A
Sbjct: 366 IMKK------------VREA------------------YENDVAAMSLQSHLIPG-LNLA 394
Query: 272 RVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIK 331
V + P TG + S + Q +++V P +G +IGK G IK
Sbjct: 395 AVGLFPASSSAVPPPPSSVTGAAPYSSFMAPEQE---MVQVFIPAQAVGAIIGKKGQHIK 451
Query: 332 SIRQASGAQIDVD--DTKDNRDECVITVTAIESPDDIKSMA---VEAVLLLQTKINDEDD 386
+ + + A I + +T D++ VI I P + + A + L + +++
Sbjct: 452 QLSRFASASIKIAPPETPDSKVRMVI----ITGPPEAQFKAQGRIYGKLKEENFFGPKEE 507
Query: 387 DTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDE-LVEVVGE 445
+ + V + G +IGK G +NE++ T A+V + + P D ND+ +V+++G
Sbjct: 508 VKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQTP---DENDQVIVKIIGH 564
Query: 446 VGS-------VRDALVQI 456
+ +RD L Q+
Sbjct: 565 FYASQMAQRKIRDILAQV 582
Score = 42.4 bits (98), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 24/148 (16%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDP-FPGAKDRVVTIYSHVKDK 93
E + ++ P +G++IGK G+ I + + A +K+ P P +K R+V I
Sbjct: 426 EQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVII------- 478
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
+A K I + K + K E I VP+S +
Sbjct: 479 ---------------TGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGR 523
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+IGK G T+ L++ T + V P+D +
Sbjct: 524 VIGKGGKTVNELQNLTAAEV-VVPRDQT 550
>gi|431890756|gb|ELK01635.1| Insulin-like growth factor 2 mRNA-binding protein 1 [Pteropus
alecto]
Length = 577
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 147/332 (44%), Gaps = 47/332 (14%)
Query: 292 GLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRD 351
G + +G Q ++ +R+L P +G +IGK G TI++I + + ++IDV K+N
Sbjct: 180 GSPVAAGAPAKQQQVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDV-HRKENAG 238
Query: 352 ECVITVTAIESPDDIKSMAVEAVLLLQTKIND-EDDDTVTIRLLVSSKVIGCIIGKSGSI 410
++ +P+ S + ++ + D + D V +++L + +G +IGK G
Sbjct: 239 AAEKAISVHSTPEGCSSACKMILEIMHKEAKDTKTADEVPLKILAHNNFVGRLIGKEGRN 298
Query: 411 INEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDG 470
+ ++ + T+ + IS + + + V G + + A +I+ ++R+ D
Sbjct: 299 LKKVEQDTETKITISSLQDLTLYNP-ERTITVKGAIENCCRAEQEIMKKVREAYEND--- 354
Query: 471 SRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLS 530
V A + S L+P + + G+ SSS++ S
Sbjct: 355 -----VAAMSLQSH--------LIPGL-----------NLAAVGLFPASSSAVPPPPSSV 390
Query: 531 MGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATI--- 587
G +PY S + P ++V +PA AVG +IGK G ++ + + + A+I
Sbjct: 391 AGAAPYSS--------FMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIA 442
Query: 588 --EMSDSKSSRGDRVALISGTPEQKRAAENLI 617
E DSK R+ +I+G PE + A+ I
Sbjct: 443 PPETPDSKV----RMVIITGPPEAQFKAQGRI 470
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 88/375 (23%), Positives = 156/375 (41%), Gaps = 74/375 (19%)
Query: 143 QILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKD---ASEP---THS--------CA 188
++LVP+ IIGK GATI+ + +T++ I V K+ A+E HS C
Sbjct: 199 RLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTPEGCSSACK 258
Query: 189 MEFDNFVLISGESEAVKKA------LFAISAIMYKFSPREDIPLETTVREAPPSIIIPS- 241
M + ++ E++ K A + A + + + +E L+ ++ I I S
Sbjct: 259 MILE---IMHKEAKDTKTADEVPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSL 315
Query: 242 -DVPIYPP-------GGL-----------------YPN--ADPILPSRSVPSILGAARVP 274
D+ +Y P G + Y N A L S +P L A V
Sbjct: 316 QDLTLYNPERTITVKGAIENCCRAEQEIMKKVREAYENDVAAMSLQSHLIPG-LNLAAVG 374
Query: 275 DLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIR 334
+ P G + S + A + E +++V P +G +IGK G IK +
Sbjct: 375 LFPASSSAVPPPPSSVAGAAPYSSFMQAPEQE--MVQVFIPAQAVGAIIGKKGQHIKQLS 432
Query: 335 QASGAQIDVD--DTKDNRDECVITVTAIESPDDIKSMA---VEAVLLLQTKINDEDDDTV 389
+ + A I + +T D++ VI I P + + A + L + +++ +
Sbjct: 433 RFASASIKIAPPETPDSKVRMVI----ITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKL 488
Query: 390 TIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDE-LVEVVGEVGS 448
+ V + G +IGK G +NE++ T A+V + + P D ND+ +V+++G +
Sbjct: 489 ETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQTP---DENDQVIVKIIGHFYA 545
Query: 449 -------VRDALVQI 456
+RD L Q+
Sbjct: 546 SQMAQRKIRDILAQV 560
Score = 46.2 bits (108), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 95/248 (38%), Gaps = 67/248 (27%)
Query: 28 KDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKV---VDPFPGAKDRVV 84
KD K +E V +IL + +G +IGK G+ + + Q+T ++ + D +R +
Sbjct: 269 KDTKTADE-VPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYNPERTI 327
Query: 85 TIYSHVKDKEDVEVDDEFNDKEPLC-AAQDALLKVHAAIANAVANATDNDK--------- 134
T+ + E C A Q+ + KV A N VA +
Sbjct: 328 TVKGAI---------------ENCCRAEQEIMKKVREAYENDVAAMSLQSHLIPGLNLAA 372
Query: 135 ----------------------------KRKEKEECQILVPSSQSANIIGKAGATIKRLR 166
+ E+E Q+ +P+ IIGK G IK+L
Sbjct: 373 VGLFPASSSAVPPPPSSVAGAAPYSSFMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLS 432
Query: 167 SKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYK---FSPRED 223
SIK+ P + P M V+I+G EA KA I + + F P+E+
Sbjct: 433 RFASASIKIAPPET--PDSKVRM-----VIITGPPEAQFKAQGRIYGKLKEENFFGPKEE 485
Query: 224 IPLETTVR 231
+ LET +R
Sbjct: 486 VKLETHIR 493
Score = 42.7 bits (99), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 24/148 (16%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDP-FPGAKDRVVTIYSHVKDK 93
E + ++ P +G++IGK G+ I + + A +K+ P P +K R+V I
Sbjct: 404 EQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVII------- 456
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
+A K I + K + K E I VP+S +
Sbjct: 457 ---------------TGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGR 501
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+IGK G T+ L++ T + V P+D +
Sbjct: 502 VIGKGGKTVNELQNLTAAEV-VVPRDQT 528
>gi|346716112|ref|NP_001231214.1| far upstream element (FUSE) binding protein 3 [Sus scrofa]
gi|336390571|gb|AEI54345.1| far upstream element binding protein 3 [Sus scrofa]
Length = 548
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 140/341 (41%), Gaps = 42/341 (12%)
Query: 315 PFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDE--CVITVT--AIESPDDIKSMA 370
P +G +IG+GG I I+ SG +I + E CV+T T +IE +
Sbjct: 85 PDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPESIEQAKRLLGQI 144
Query: 371 VEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKAD-VRISKGDK 429
V+ ND D + LL+ + +G +IGK G I ++++RT V I G
Sbjct: 145 VDRCRNGPGFHNDVDGSSTIQELLIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPL 204
Query: 430 PKCADANDELVEVVGEVGSVRDALVQIILRLRDDA-LKDRDGSRNPPVGADHIYSS---- 484
P AD + +V R+ +++II R +D A + G + +G I S
Sbjct: 205 PTGADKPLRITGDPFKVQVAREMVLEII-REKDQADFRGVRGDFSSRMGGGSIEVSVPRF 263
Query: 485 --------------------GTGISMPP---LLP--SIPPVGPLGYDQRADSGSGIGMLS 519
G I P + P + +GP Q A +L+
Sbjct: 264 AVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPERAAQVMGPPDRCQHAAHVISELILT 323
Query: 520 SSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANI 579
+ G+G L++ +S GG+ + VPA+ G VIGK G N+ +I
Sbjct: 324 AQERDGFGGLAVARGRGRGRGDWSVGTPGGI---QEITYTVPADKCGLVIGKGGENIKSI 380
Query: 580 RKISGATIEMSDS---KSSRGDRVALISGTPEQKRAAENLI 617
+ SGA +E+ + + G RV I G P+Q A +LI
Sbjct: 381 NQQSGAHVELQRNPPPNTDPGLRVFTIRGVPQQIEVARHLI 421
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%)
Query: 554 LTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAA 613
+T E VP VG +IG+ G ++ I+ SG I+++ S +R +++GTPE A
Sbjct: 78 ITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPESIEQA 137
Query: 614 ENLI 617
+ L+
Sbjct: 138 KRLL 141
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 537 GSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSR 596
G +SS++ GG ++EV VP AVG VIG+ G + I+ +G I+
Sbjct: 242 GVRGDFSSRMGGG-----SIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGIS 296
Query: 597 GDRVALISGTPEQKRAAENLIQAFIM 622
+R A + G P++ + A ++I I+
Sbjct: 297 PERAAQVMGPPDRCQHAAHVISELIL 322
>gi|300794399|ref|NP_001179383.1| insulin-like growth factor 2 mRNA-binding protein 1 [Bos taurus]
gi|296476533|tpg|DAA18648.1| TPA: insulin-like growth factor 2 mRNA binding protein 1-like [Bos
taurus]
Length = 577
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 147/332 (44%), Gaps = 47/332 (14%)
Query: 292 GLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRD 351
G + +G Q ++ +R+L P +G +IGK G TI++I + + ++IDV K+N
Sbjct: 180 GSPVAAGAPAKQQQVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDV-HRKENAG 238
Query: 352 ECVITVTAIESPDDIKSMAVEAVLLLQTKIND-EDDDTVTIRLLVSSKVIGCIIGKSGSI 410
++ +P+ S + ++ + D + D V +++L + +G +IGK G
Sbjct: 239 AAEKAISVHSTPEGCSSACKMILEIMHKEAKDTKTADEVPLKILAHNNFVGRLIGKEGRN 298
Query: 411 INEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDG 470
+ ++ + T+ + IS + + + V G + + A +I+ ++R+ D
Sbjct: 299 LKKVEQDTETKITISSLQDLTLYNP-ERTITVKGAIENCCRAEQEIMKKVREAYEND--- 354
Query: 471 SRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLS 530
V A + S L+P + + G+ SSS++ S
Sbjct: 355 -----VAAMSLQSH--------LIPGL-----------NLAAVGLFPASSSAVPPPPSSV 390
Query: 531 MGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATI--- 587
G +PY S + P ++V +PA AVG +IGK G ++ + + + A+I
Sbjct: 391 TGAAPYSS--------FMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIA 442
Query: 588 --EMSDSKSSRGDRVALISGTPEQKRAAENLI 617
E DSK R+ +I+G PE + A+ I
Sbjct: 443 PPETPDSKV----RMVIITGPPEAQFKAQGRI 470
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 89/375 (23%), Positives = 157/375 (41%), Gaps = 74/375 (19%)
Query: 143 QILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKD---ASEP---THS--------CA 188
++LVP+ IIGK GATI+ + +T++ I V K+ A+E HS C
Sbjct: 199 RLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTPEGCSSACK 258
Query: 189 MEFDNFVLISGESEAVKKA------LFAISAIMYKFSPREDIPLETTVREAPPSIIIPS- 241
M + ++ E++ K A + A + + + +E L+ ++ I I S
Sbjct: 259 MILE---IMHKEAKDTKTADEVPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSL 315
Query: 242 -DVPIYPP-------GGL-----------------YPN--ADPILPSRSVPSILGAARVP 274
D+ +Y P G + Y N A L S +P L A V
Sbjct: 316 QDLTLYNPERTITVKGAIENCCRAEQEIMKKVREAYENDVAAMSLQSHLIPG-LNLAAVG 374
Query: 275 DLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIR 334
+ P TG + S + A + E +++V P +G +IGK G IK +
Sbjct: 375 LFPASSSAVPPPPSSVTGAAPYSSFMQAPEQE--MVQVFIPAQAVGAIIGKKGQHIKQLS 432
Query: 335 QASGAQIDVD--DTKDNRDECVITVTAIESPDDIKSMA---VEAVLLLQTKINDEDDDTV 389
+ + A I + +T D++ VI I P + + A + L + +++ +
Sbjct: 433 RFASASIKIAPPETPDSKVRMVI----ITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKL 488
Query: 390 TIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDE-LVEVVGEVGS 448
+ V + G +IGK G +NE++ T A+V + + P D ND+ +V+++G +
Sbjct: 489 ETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQTP---DENDQVIVKIIGHFYA 545
Query: 449 -------VRDALVQI 456
+RD L Q+
Sbjct: 546 SQMAQRKIRDILAQV 560
Score = 46.2 bits (108), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 95/248 (38%), Gaps = 67/248 (27%)
Query: 28 KDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKV---VDPFPGAKDRVV 84
KD K +E V +IL + +G +IGK G+ + + Q+T ++ + D +R +
Sbjct: 269 KDTKTADE-VPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYNPERTI 327
Query: 85 TIYSHVKDKEDVEVDDEFNDKEPLC-AAQDALLKVHAAIANAVANATDNDK--------- 134
T+ + E C A Q+ + KV A N VA +
Sbjct: 328 TVKGAI---------------ENCCRAEQEIMKKVREAYENDVAAMSLQSHLIPGLNLAA 372
Query: 135 ----------------------------KRKEKEECQILVPSSQSANIIGKAGATIKRLR 166
+ E+E Q+ +P+ IIGK G IK+L
Sbjct: 373 VGLFPASSSAVPPPPSSVTGAAPYSSFMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLS 432
Query: 167 SKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYK---FSPRED 223
SIK+ P + P M V+I+G EA KA I + + F P+E+
Sbjct: 433 RFASASIKIAPPET--PDSKVRM-----VIITGPPEAQFKAQGRIYGKLKEENFFGPKEE 485
Query: 224 IPLETTVR 231
+ LET +R
Sbjct: 486 VKLETHIR 493
Score = 42.7 bits (99), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 24/148 (16%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDP-FPGAKDRVVTIYSHVKDK 93
E + ++ P +G++IGK G+ I + + A +K+ P P +K R+V I
Sbjct: 404 EQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVII------- 456
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
+A K I + K + K E I VP+S +
Sbjct: 457 ---------------TGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGR 501
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+IGK G T+ L++ T + V P+D +
Sbjct: 502 VIGKGGKTVNELQNLTAAEV-VVPRDQT 528
>gi|335297826|ref|XP_003358128.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 1
isoform 1 [Sus scrofa]
Length = 577
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 149/332 (44%), Gaps = 47/332 (14%)
Query: 292 GLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRD 351
G + +G Q ++ +R+L P +G +IGK G TI++I + + ++IDV K+N
Sbjct: 180 GSPVAAGAPAKQQQVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDV-HRKENAG 238
Query: 352 ECVITVTAIESPDDIKSMAVEAVLLLQTKIND-EDDDTVTIRLLVSSKVIGCIIGKSGSI 410
++ +P+ S + ++ + D + D V +++L + +G +IGK G
Sbjct: 239 AAEKAISVHSTPEGCSSACKMILEIMHKEAKDTKTADEVPLKILAHNNFVGRLIGKEGRN 298
Query: 411 INEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDG 470
+ ++ + T+ + IS + + + V G + + A +I+ ++R+ D
Sbjct: 299 LKKVEQDTETKITISSLQDLTLYNP-ERTITVKGAIENCCRAEQEIMKKVREAYEND--- 354
Query: 471 SRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLS 530
V A + S L+P + + G+ SSS++ S
Sbjct: 355 -----VAAMSLQSH--------LIPGL-----------NLAAVGLFPASSSAVPPPPSSV 390
Query: 531 MGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMS 590
G +PY S + P ++V +PA AVG +IGK G ++ + + + A+I+++
Sbjct: 391 TGAAPYSS--------FMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIA 442
Query: 591 -----DSKSSRGDRVALISGTPEQKRAAENLI 617
DSK R+ +I+G PE + A+ I
Sbjct: 443 PPETPDSKV----RMVIITGPPEAQFKAQGRI 470
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 89/375 (23%), Positives = 157/375 (41%), Gaps = 74/375 (19%)
Query: 143 QILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKD---ASEP---THS--------CA 188
++LVP+ IIGK GATI+ + +T++ I V K+ A+E HS C
Sbjct: 199 RLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTPEGCSSACK 258
Query: 189 MEFDNFVLISGESEAVKKA------LFAISAIMYKFSPREDIPLETTVREAPPSIIIPS- 241
M + ++ E++ K A + A + + + +E L+ ++ I I S
Sbjct: 259 MILE---IMHKEAKDTKTADEVPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSL 315
Query: 242 -DVPIYPP-------GGL-----------------YPN--ADPILPSRSVPSILGAARVP 274
D+ +Y P G + Y N A L S +P L A V
Sbjct: 316 QDLTLYNPERTITVKGAIENCCRAEQEIMKKVREAYENDVAAMSLQSHLIPG-LNLAAVG 374
Query: 275 DLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIR 334
+ P TG + S + A + E +++V P +G +IGK G IK +
Sbjct: 375 LFPASSSAVPPPPSSVTGAAPYSSFMQAPEQE--MVQVFIPAQAVGAIIGKKGQHIKQLS 432
Query: 335 QASGAQIDVD--DTKDNRDECVITVTAIESPDDIKSMA---VEAVLLLQTKINDEDDDTV 389
+ + A I + +T D++ VI I P + + A + L + +++ +
Sbjct: 433 RFASASIKIAPPETPDSKVRMVI----ITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKL 488
Query: 390 TIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDE-LVEVVGEVGS 448
+ V + G +IGK G +NE++ T A+V + + P D ND+ +V+++G +
Sbjct: 489 ETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQTP---DENDQVIVKIIGHFYA 545
Query: 449 -------VRDALVQI 456
+RD L Q+
Sbjct: 546 SQMAQRKIRDILAQV 560
Score = 46.6 bits (109), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 95/248 (38%), Gaps = 67/248 (27%)
Query: 28 KDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKV---VDPFPGAKDRVV 84
KD K +E V +IL + +G +IGK G+ + + Q+T ++ + D +R +
Sbjct: 269 KDTKTADE-VPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYNPERTI 327
Query: 85 TIYSHVKDKEDVEVDDEFNDKEPLC-AAQDALLKVHAAIANAVANATDNDK--------- 134
T+ + E C A Q+ + KV A N VA +
Sbjct: 328 TVKGAI---------------ENCCRAEQEIMKKVREAYENDVAAMSLQSHLIPGLNLAA 372
Query: 135 ----------------------------KRKEKEECQILVPSSQSANIIGKAGATIKRLR 166
+ E+E Q+ +P+ IIGK G IK+L
Sbjct: 373 VGLFPASSSAVPPPPSSVTGAAPYSSFMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLS 432
Query: 167 SKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYK---FSPRED 223
SIK+ P + P M V+I+G EA KA I + + F P+E+
Sbjct: 433 RFASASIKIAPPET--PDSKVRM-----VIITGPPEAQFKAQGRIYGKLKEENFFGPKEE 485
Query: 224 IPLETTVR 231
+ LET +R
Sbjct: 486 VKLETHIR 493
Score = 42.7 bits (99), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 24/148 (16%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDP-FPGAKDRVVTIYSHVKDK 93
E + ++ P +G++IGK G+ I + + A +K+ P P +K R+V I
Sbjct: 404 EQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVII------- 456
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
+A K I + K + K E I VP+S +
Sbjct: 457 ---------------TGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGR 501
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+IGK G T+ L++ T + V P+D +
Sbjct: 502 VIGKGGKTVNELQNLTAAEV-VVPRDQT 528
>gi|148226696|ref|NP_001080123.1| poly(rC) binding protein 3 [Xenopus laevis]
gi|27370875|gb|AAH41241.1| Pcbp2b protein [Xenopus laevis]
Length = 353
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 160/349 (45%), Gaps = 40/349 (11%)
Query: 297 SGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVIT 356
+G++ + L IR+L ++G +IGK G ++K +R+ SGA+I++ + N E +IT
Sbjct: 3 TGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIIT 60
Query: 357 VTAIESPDDIKSMAVEAVL-LLQTKINDEDDDT-------VTIRLLVSSKVIGCIIGKSG 408
+ P + A ++ L+ I+ ++ VT+RL+V + G +IGK G
Sbjct: 61 LAG---PTNAIFKAFSMIIDKLEEDISSSMTNSTASSKPPVTLRLVVPASQCGSLIGKGG 117
Query: 409 SIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDR 468
I EIR+ T A V+++ P ++ + + + G S+ + + QI + + + K
Sbjct: 118 CKIKEIRESTGAQVQVAGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLESPPKGV 174
Query: 469 DGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYG--- 525
P + + +G +S + L +R+ +G G+ L + L+G
Sbjct: 175 TIPYRPKPSSSPVIFAGGQVSRQAGGHACET--DLWEGRRSHTG-GVS-LDAVDLHGAYT 230
Query: 526 --------------YGSLSMGDSPYGSMSSYSSKLYGGL---PPPLTLEVLVPANAVGKV 568
L+M S + S ++ GG+ + E+ +P + +G +
Sbjct: 231 IQGQYAIPQPDLTKLHQLAMQQSHFPMSHSGNTGFSGGIDASAQATSHELTIPNDLIGCI 290
Query: 569 IGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLI 617
IG+ G+ + IR++SGA I++++ DR I+G+ A+ LI
Sbjct: 291 IGRQGAKINEIRQMSGAQIKIANPVEGSNDRQVTITGSTASISLAQYLI 339
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 82/358 (22%), Positives = 147/358 (41%), Gaps = 65/358 (18%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH 89
E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R++T
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIIT---- 60
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAV-----ANATDNDKKRKEKEECQI 144
L +A+ K + I + + ++ T++ K ++
Sbjct: 61 ------------------LAGPTNAIFKAFSMIIDKLEEDISSSMTNSTASSKPPVTLRL 102
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAV 204
+VP+SQ ++IGK G IK +R T ++V T + + I+G +++
Sbjct: 103 VVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNST-------ERAITIAGIPQSI 155
Query: 205 KKALFAISAIMYKFSPRE-DIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRS 263
+ + I +M + P+ IP +P +I GG D RS
Sbjct: 156 IECVKQICVVMLESPPKGVTIPYRPKPSSSP--VIFAGGQVSRQAGGHACETDLWEGRRS 213
Query: 264 --------------VPSILGAARVPD-----LQGYADTGNTWPVYSTGLSLVSGLVGAS- 303
+I G +P L A + +P+ +G + SG + AS
Sbjct: 214 HTGGVSLDAVDLHGAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMSHSGNTGFSGGIDASA 273
Query: 304 --QSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTA 359
S EL I P + IG +IG+ G I IRQ SGAQI + + + ++ +T+T
Sbjct: 274 QATSHELTI----PNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSNDRQVTITG 327
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Query: 383 DEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEV 442
D + L + + +IGCIIG+ G+ INEIR+ + A ++I+ +ND V +
Sbjct: 270 DASAQATSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN----PVEGSNDRQVTI 325
Query: 443 VGEVGSVRDALVQIILRLRDDA 464
G S+ A I +RL +A
Sbjct: 326 TGSTASISLAQYLINVRLSSEA 347
>gi|291405848|ref|XP_002719162.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein
1-like, partial [Oryctolagus cuniculus]
Length = 570
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 147/332 (44%), Gaps = 47/332 (14%)
Query: 292 GLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRD 351
G + +G Q ++ +R+L P +G +IGK G TI++I + + ++IDV K+N
Sbjct: 173 GSPVAAGAPAKQQQVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDV-HRKENAG 231
Query: 352 ECVITVTAIESPDDIKSMAVEAVLLLQTKIND-EDDDTVTIRLLVSSKVIGCIIGKSGSI 410
++ +P+ S + ++ + D + D V +++L + +G +IGK G
Sbjct: 232 AAEKAISIHSTPEGCSSACKMILEIMHKEAKDTKTADEVPLKILAHNNFVGRLIGKEGRN 291
Query: 411 INEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDG 470
+ ++ + T+ + IS + + + V G + + A +I+ ++R+ D
Sbjct: 292 LKKVEQDTETKITISSLQDLTLYNP-ERTITVKGAIENCCRAEQEIMKKVREAYEND--- 347
Query: 471 SRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLS 530
V A + S L+P + + G+ SSS++ S
Sbjct: 348 -----VAAMSLQSH--------LIPGL-----------NLAAVGLFPASSSAVPPPPSSV 383
Query: 531 MGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATI--- 587
G +PY S + P ++V +PA AVG +IGK G ++ + + + A+I
Sbjct: 384 TGAAPYSS--------FMQAPEQEVVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIA 435
Query: 588 --EMSDSKSSRGDRVALISGTPEQKRAAENLI 617
E DSK R+ +I+G PE + A+ I
Sbjct: 436 PPETPDSKV----RMVIITGPPEAQFKAQGRI 463
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 97/438 (22%), Positives = 174/438 (39%), Gaps = 97/438 (22%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKEDVEV 98
R+L P +G++IGK G I +I ++T++++ V GA ++ ++I
Sbjct: 192 RLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISI------------ 239
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
+ E +A +L++ + D K ++ +IL ++ +IGK
Sbjct: 240 ---HSTPEGCSSACKMILEI--------MHKEAKDTKTADEVPLKILAHNNFVGRLIGKE 288
Query: 159 GATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESE-----AVKKALFAISA 213
G +K++ T T I ++ + L + E A++ A
Sbjct: 289 GRNLKKVEQDTETKITIS-------------SLQDLTLYNPERTITVKGAIENCCRAEQE 335
Query: 214 IMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPN--ADPILPSRSVPSILGAA 271
IM K VREA Y N A L S +P L A
Sbjct: 336 IMKK------------VREA------------------YENDVAAMSLQSHLIPG-LNLA 364
Query: 272 RVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIK 331
V + P TG + S + A + E V++V P +G +IGK G IK
Sbjct: 365 AVGLFPASSSAVPPPPSSVTGAAPYSSFMQAPEQE--VVQVFIPAQAVGAIIGKKGQHIK 422
Query: 332 SIRQASGAQIDVD--DTKDNRDECVITVTAIESPDDIKSMA---VEAVLLLQTKINDEDD 386
+ + + A I + +T D++ VI I P + + A + L + +++
Sbjct: 423 QLSRFASASIKIAPPETPDSKVRMVI----ITGPPEAQFKAQGRIYGKLKEENFFGPKEE 478
Query: 387 DTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDE-LVEVVGE 445
+ + V + G +IGK G +NE++ T A+V + + P D ND+ +V+++G
Sbjct: 479 VKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQTP---DENDQVIVKIIGH 535
Query: 446 VGS-------VRDALVQI 456
+ +RD L Q+
Sbjct: 536 FYASQMAQRKIRDILAQV 553
Score = 42.7 bits (99), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 24/148 (16%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDP-FPGAKDRVVTIYSHVKDK 93
E + ++ P +G++IGK G+ I + + A +K+ P P +K R+V I
Sbjct: 397 EQEVVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVII------- 449
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
+A K I + K + K E I VP+S +
Sbjct: 450 ---------------TGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGR 494
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+IGK G T+ L++ T + V P+D +
Sbjct: 495 VIGKGGKTVNELQNLTAAEV-VVPRDQT 521
>gi|149723930|ref|XP_001502310.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 1
isoform 1 [Equus caballus]
Length = 577
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 147/332 (44%), Gaps = 47/332 (14%)
Query: 292 GLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRD 351
G + +G Q ++ +R+L P +G +IGK G TI++I + + ++IDV K+N
Sbjct: 180 GSPVAAGAPAKQQQVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDV-HRKENAG 238
Query: 352 ECVITVTAIESPDDIKSMAVEAVLLLQTKIND-EDDDTVTIRLLVSSKVIGCIIGKSGSI 410
++ +P+ S + ++ + D + D V +++L + +G +IGK G
Sbjct: 239 AAEKAISVHSTPEGCSSACKMILEIMHKEAKDTKTADEVPLKILAHNNFVGRLIGKEGRN 298
Query: 411 INEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDG 470
+ ++ + T+ + IS + + + V G + + A +I+ ++R+ D
Sbjct: 299 LKKVEQDTETKITISSLQDLTLYNP-ERTITVKGAIENCCRAEQEIMKKVREAYEND--- 354
Query: 471 SRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLS 530
V A + S L+P + + G+ SSS++ S
Sbjct: 355 -----VAAMSLQSH--------LIPGL-----------NLAAVGLFPASSSAVPPPPSSV 390
Query: 531 MGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATI--- 587
G +PY S + P ++V +PA AVG +IGK G ++ + + + A+I
Sbjct: 391 TGAAPYSS--------FMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIA 442
Query: 588 --EMSDSKSSRGDRVALISGTPEQKRAAENLI 617
E DSK R+ +I+G PE + A+ I
Sbjct: 443 PPETPDSKV----RMVIITGPPEAQFKAQGRI 470
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 89/375 (23%), Positives = 157/375 (41%), Gaps = 74/375 (19%)
Query: 143 QILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKD---ASEP---THS--------CA 188
++LVP+ IIGK GATI+ + +T++ I V K+ A+E HS C
Sbjct: 199 RLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTPEGCSSACK 258
Query: 189 MEFDNFVLISGESEAVKKA------LFAISAIMYKFSPREDIPLETTVREAPPSIIIPS- 241
M + ++ E++ K A + A + + + +E L+ ++ I I S
Sbjct: 259 MILE---IMHKEAKDTKTADEVPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSL 315
Query: 242 -DVPIYPP-------GGL-----------------YPN--ADPILPSRSVPSILGAARVP 274
D+ +Y P G + Y N A L S +P L A V
Sbjct: 316 QDLTLYNPERTITVKGAIENCCRAEQEIMKKVREAYENDVAAMSLQSHLIPG-LNLAAVG 374
Query: 275 DLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIR 334
+ P TG + S + A + E +++V P +G +IGK G IK +
Sbjct: 375 LFPASSSAVPPPPSSVTGAAPYSSFMQAPEQE--MVQVFIPAQAVGAIIGKKGQHIKQLS 432
Query: 335 QASGAQIDVD--DTKDNRDECVITVTAIESPDDIKSMA---VEAVLLLQTKINDEDDDTV 389
+ + A I + +T D++ VI I P + + A + L + +++ +
Sbjct: 433 RFASASIKIAPPETPDSKVRMVI----ITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKL 488
Query: 390 TIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDE-LVEVVGEVGS 448
+ V + G +IGK G +NE++ T A+V + + P D ND+ +V+++G +
Sbjct: 489 ETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQTP---DENDQVIVKIIGHFYA 545
Query: 449 -------VRDALVQI 456
+RD L Q+
Sbjct: 546 SQMAQRKIRDILAQV 560
Score = 46.2 bits (108), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 95/248 (38%), Gaps = 67/248 (27%)
Query: 28 KDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKV---VDPFPGAKDRVV 84
KD K +E V +IL + +G +IGK G+ + + Q+T ++ + D +R +
Sbjct: 269 KDTKTADE-VPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYNPERTI 327
Query: 85 TIYSHVKDKEDVEVDDEFNDKEPLC-AAQDALLKVHAAIANAVANATDNDK--------- 134
T+ + E C A Q+ + KV A N VA +
Sbjct: 328 TVKGAI---------------ENCCRAEQEIMKKVREAYENDVAAMSLQSHLIPGLNLAA 372
Query: 135 ----------------------------KRKEKEECQILVPSSQSANIIGKAGATIKRLR 166
+ E+E Q+ +P+ IIGK G IK+L
Sbjct: 373 VGLFPASSSAVPPPPSSVTGAAPYSSFMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLS 432
Query: 167 SKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYK---FSPRED 223
SIK+ P + P M V+I+G EA KA I + + F P+E+
Sbjct: 433 RFASASIKIAPPET--PDSKVRM-----VIITGPPEAQFKAQGRIYGKLKEENFFGPKEE 485
Query: 224 IPLETTVR 231
+ LET +R
Sbjct: 486 VKLETHIR 493
Score = 42.4 bits (98), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 24/148 (16%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDP-FPGAKDRVVTIYSHVKDK 93
E + ++ P +G++IGK G+ I + + A +K+ P P +K R+V I
Sbjct: 404 EQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVII------- 456
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
+A K I + K + K E I VP+S +
Sbjct: 457 ---------------TGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGR 501
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+IGK G T+ L++ T + V P+D +
Sbjct: 502 VIGKGGKTVNELQNLTAAEV-VVPRDQT 528
>gi|432865686|ref|XP_004070563.1| PREDICTED: poly(rC)-binding protein 4-like [Oryzias latipes]
Length = 467
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 145/344 (42%), Gaps = 53/344 (15%)
Query: 36 SVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKED 95
++ R+L +GS+IGK G+ + IR+E+ ARV + + +R++TI
Sbjct: 26 TLTLRLLMHGKEVGSIIGKKGETVKRIREESSARVNISEG--SCPERIITITG------- 76
Query: 96 VEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANII 155
D F A K+ + VAN T + K ++++P+SQ ++I
Sbjct: 77 -STDSVFR------AFTMITYKLEEDLTALVANGTISSKP---PVTLRLVIPASQCGSLI 126
Query: 156 GKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIM 215
GK GA IK +R T I+V T + V ISG ++V + + I ++
Sbjct: 127 GKGGAKIKEIRESTGAQIQVAGDLLPNST-------ERGVTISGNQDSVIQCVKLICTVI 179
Query: 216 YKFSPR-EDIPLETTVREAPPSIIIPSDVPI----YPPGGLYPNADPILPSRSVPSILGA 270
+ P+ IP T +P +++I + + P LY L + ++
Sbjct: 180 LESPPKGATIPYRPT--PSPAALLIAGNQVFEASDFAPHPLYSVTQGGLDLQQAYALQNQ 237
Query: 271 ARVPD-----------LQGYADTGNTWPVYSTGLSLV----SGLVGASQ-SEELVIRVLC 314
+P QG + G L+ SG+ SQ S+EL+I
Sbjct: 238 YGIPHSELAKLHQLSVQQGLSPIAQPASTIMPGKLLLHFLPSGMDSTSQTSQELLI---- 293
Query: 315 PFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
P + IG +IG+ G I IRQ SGAQI + D + +T+T
Sbjct: 294 PNDLIGSIIGRQGTKINEIRQVSGAQIKIGSQLDGTSDRHVTIT 337
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 71/131 (54%), Gaps = 23/131 (17%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
L +R+L ++G +IGK G T+K IR+ S A++++ + + E +IT+T S D +
Sbjct: 27 LTLRLLMHGKEVGSIIGKKGETVKRIREESSARVNISE--GSCPERIITITG--STDSV- 81
Query: 368 SMAVEAVLLLQTKINDEDDDT-------------VTIRLLVSSKVIGCIIGKSGSIINEI 414
A ++ K+ E+D T VT+RL++ + G +IGK G+ I EI
Sbjct: 82 ---FRAFTMITYKL--EEDLTALVANGTISSKPPVTLRLVIPASQCGSLIGKGGAKIKEI 136
Query: 415 RKRTKADVRIS 425
R+ T A ++++
Sbjct: 137 RESTGAQIQVA 147
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 9/92 (9%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+T+RLL+ K +G IIGK G + IR+ + A V IS+G P + ++ + G
Sbjct: 26 TLTLRLLMHGKEVGSIIGKKGETVKRIREESSARVNISEGSCP------ERIITITGSTD 79
Query: 448 SVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
SV A I +L +D + + S PPV
Sbjct: 80 SVFRAFTMITYKLEEDLTALVANGTISSKPPV 111
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%)
Query: 557 EVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENL 616
E+L+P + +G +IG+ G+ + IR++SGA I++ DR I+GTP A+ L
Sbjct: 290 ELLIPNDLIGSIIGRQGTKINEIRQVSGAQIKIGSQLDGTSDRHVTITGTPVSINLAQYL 349
Query: 617 IQAFI 621
I + +
Sbjct: 350 ITSCL 354
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 552 PPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMS-DSKSSRGDRVALISGTPEQK 610
PP+TL +++PA+ G +IGK G+ + IR+ +GA I+++ D + +R ISG +
Sbjct: 109 PPVTLRLVIPASQCGSLIGKGGAKIKEIRESTGAQIQVAGDLLPNSTERGVTISGNQDSV 168
Query: 611 RAAENLIQAFIM 622
LI I+
Sbjct: 169 IQCVKLICTVIL 180
>gi|53749712|ref|NP_001005451.1| poly(rC) binding protein 3 [Xenopus (Silurana) tropicalis]
gi|49250542|gb|AAH74565.1| poly(rC) binding protein 2 [Xenopus (Silurana) tropicalis]
gi|89266917|emb|CAJ82240.1| novel protein similar to poly(rC) binding protein 2 [Xenopus
(Silurana) tropicalis]
Length = 353
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 160/349 (45%), Gaps = 40/349 (11%)
Query: 297 SGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVIT 356
+G++ + L IR+L ++G +IGK G ++K +R+ SGA+I++ + N E +IT
Sbjct: 3 TGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIIT 60
Query: 357 VTAIESPDDIKSMAVEAVL-LLQTKINDEDDDT-------VTIRLLVSSKVIGCIIGKSG 408
+ P + A ++ L+ I+ ++ VT+RL+V + G +IGK G
Sbjct: 61 LAG---PTNAIFKAFSMIIDKLEEDISSSMTNSTASSKPPVTLRLVVPASQCGSLIGKGG 117
Query: 409 SIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDR 468
I EIR+ T A V+++ P ++ + + + G S+ + + QI + + + K
Sbjct: 118 CKIKEIRESTGAQVQVAGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLESPPKGV 174
Query: 469 DGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYG--- 525
P + + +G +S + L +R+ +G G+ L + L+G
Sbjct: 175 TIPYRPKPSSSPVIFAGGQVSRQAGGHACET--DLWEGRRSHTG-GVS-LDAVDLHGAYT 230
Query: 526 --------------YGSLSMGDSPYGSMSSYSSKLYGGL---PPPLTLEVLVPANAVGKV 568
L+M S + S ++ GG+ + E+ +P + +G +
Sbjct: 231 IQGQYAIPQPDLTKLHQLAMQQSHFPMSHSGNTGFSGGIDASAQTTSHELTIPNDLIGCI 290
Query: 569 IGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLI 617
IG+ G+ + IR++SGA I++++ DR I+G+ A+ LI
Sbjct: 291 IGRQGAKINEIRQMSGAQIKIANPVEGSNDRQVTITGSTASISLAQYLI 339
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 82/358 (22%), Positives = 147/358 (41%), Gaps = 65/358 (18%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH 89
E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R++T
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIIT---- 60
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAV-----ANATDNDKKRKEKEECQI 144
L +A+ K + I + + ++ T++ K ++
Sbjct: 61 ------------------LAGPTNAIFKAFSMIIDKLEEDISSSMTNSTASSKPPVTLRL 102
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAV 204
+VP+SQ ++IGK G IK +R T ++V T + + I+G +++
Sbjct: 103 VVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNST-------ERAITIAGIPQSI 155
Query: 205 KKALFAISAIMYKFSPRE-DIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRS 263
+ + I +M + P+ IP +P +I GG D RS
Sbjct: 156 IECVKQICVVMLESPPKGVTIPYRPKPSSSP--VIFAGGQVSRQAGGHACETDLWEGRRS 213
Query: 264 --------------VPSILGAARVPD-----LQGYADTGNTWPVYSTGLSLVSGLVGAS- 303
+I G +P L A + +P+ +G + SG + AS
Sbjct: 214 HTGGVSLDAVDLHGAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMSHSGNTGFSGGIDASA 273
Query: 304 --QSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTA 359
S EL I P + IG +IG+ G I IRQ SGAQI + + + ++ +T+T
Sbjct: 274 QTTSHELTI----PNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSNDRQVTITG 327
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query: 383 DEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEV 442
D T + L + + +IGCIIG+ G+ INEIR+ + A ++I+ +ND V +
Sbjct: 270 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN----PVEGSNDRQVTI 325
Query: 443 VGEVGSVRDALVQIILRLRDDA 464
G S+ A I +RL +A
Sbjct: 326 TGSTASISLAQYLINVRLSSEA 347
>gi|54037961|gb|AAH84195.1| Pcbp2 protein [Xenopus laevis]
Length = 353
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 155/338 (45%), Gaps = 40/338 (11%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
L IR+L ++G +IGK G ++K +R+ SGA+I++ + N E +IT+ P +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLAG---PTNAI 68
Query: 368 SMAVEAVL-LLQTKINDEDDDT-------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
A ++ L+ I+ ++ VT+RL+V + G +IGK G I EIR+ T
Sbjct: 69 FKAFSMIIDKLEEDISSSMTNSTASSKPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTG 128
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGAD 479
A V+++ P ++ + + + G S+ + + QI + + + K P +
Sbjct: 129 AQVQVAGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSS 185
Query: 480 HIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYG-------------- 525
+ +G +S + L +R+ +G G+ L + L+G
Sbjct: 186 PVIFAGGQVSRQAGGHACET--DLWEGRRSHTG-GVS-LDAVDLHGAYIIQGQYAIPQPD 241
Query: 526 ---YGSLSMGDSPYGSMSSYSSKLYGGL---PPPLTLEVLVPANAVGKVIGKAGSNLANI 579
L+M S + S ++ GG+ + E+ +P + +G +IG+ G+ + I
Sbjct: 242 LTKLHQLAMQQSHFPMSHSGNTGFSGGIDASAQTTSHELTIPNDLIGCIIGRQGAKINEI 301
Query: 580 RKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLI 617
R++SGA I++++ DR I+G+ A+ LI
Sbjct: 302 RQMSGAQIKIANPVEGSNDRQVTITGSTASISLAQYLI 339
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 82/358 (22%), Positives = 146/358 (40%), Gaps = 65/358 (18%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH 89
E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R++T
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIIT---- 60
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAV-----ANATDNDKKRKEKEECQI 144
L +A+ K + I + + ++ T++ K ++
Sbjct: 61 ------------------LAGPTNAIFKAFSMIIDKLEEDISSSMTNSTASSKPPVTLRL 102
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAV 204
+VP+SQ ++IGK G IK +R T ++V T + + I+G +++
Sbjct: 103 VVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNST-------ERAITIAGIPQSI 155
Query: 205 KKALFAISAIMYKFSPRE-DIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRS 263
+ + I +M + P+ IP +P +I GG D RS
Sbjct: 156 IECVKQICVVMLESPPKGVTIPYRPKPSSSP--VIFAGGQVSRQAGGHACETDLWEGRRS 213
Query: 264 VPS--------------ILGAARVPD-----LQGYADTGNTWPVYSTGLSLVSGLVGAS- 303
I G +P L A + +P+ +G + SG + AS
Sbjct: 214 HTGGVSLDAVDLHGAYIIQGQYAIPQPDLTKLHQLAMQQSHFPMSHSGNTGFSGGIDASA 273
Query: 304 --QSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTA 359
S EL I P + IG +IG+ G I IRQ SGAQI + + + ++ +T+T
Sbjct: 274 QTTSHELTI----PNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSNDRQVTITG 327
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 51/92 (55%), Gaps = 9/92 (9%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+TIRLL+ K +G IIGK G + ++R+ + A + IS+G+ P + ++ + G
Sbjct: 13 TLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCP------ERIITLAGPTN 66
Query: 448 SVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
++ A II +L +D ++ + S PPV
Sbjct: 67 AIFKAFSMIIDKLEEDISSSMTNSTASSKPPV 98
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query: 383 DEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEV 442
D T + L + + +IGCIIG+ G+ INEIR+ + A ++I+ +ND V +
Sbjct: 270 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN----PVEGSNDRQVTI 325
Query: 443 VGEVGSVRDALVQIILRLRDDA 464
G S+ A I +RL +A
Sbjct: 326 TGSTASISLAQYLINVRLSSEA 347
Score = 43.5 bits (101), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 302 ASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDV-DDTKDNRDECVITVTAI 360
AS + +R++ P ++ G +IGKGG IK IR+++GAQ+ V D N E IT+ I
Sbjct: 92 ASSKPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGI 151
>gi|402862114|ref|XP_003895414.1| PREDICTED: poly(rC)-binding protein 3-like, partial [Papio anubis]
Length = 327
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 94/183 (51%), Gaps = 26/183 (14%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDD-- 365
L IR+L ++G +IGK G T+K +R+ SGA+I++ + N E ++T+T P D
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG---PTDAI 100
Query: 366 IKSMAVEAVLLLQTKINDEDDD------TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
K+ A+ A + IN + VT+RL+V + G +IGK GS I EIR+ T
Sbjct: 101 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 160
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGAD 479
A V+++ P ++ + V + G DA++Q + ++ L+ +PP GA
Sbjct: 161 AQVQVAGDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLE------SPPKGAT 207
Query: 480 HIY 482
Y
Sbjct: 208 IPY 210
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 91/205 (44%), Gaps = 37/205 (18%)
Query: 23 RRINEK-DEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKD 81
RR+ K E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +
Sbjct: 31 RRMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPE 88
Query: 82 RVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIA-----NAVANATDNDKKR 136
R+VTI DA+ K A IA + + + +++
Sbjct: 89 RIVTI----------------------TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATS 126
Query: 137 KEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVL 196
K +++VP+SQ ++IGK G+ IK +R T ++V T + V
Sbjct: 127 KPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNST-------ERAVT 179
Query: 197 ISGESEAVKKALFAISAIMYKFSPR 221
ISG +A+ + + I +M + P+
Sbjct: 180 ISGTPDAIIQCVKQICVVMLESPPK 204
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 57/104 (54%), Gaps = 10/104 (9%)
Query: 377 LQTKINDED-DDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADA 435
+++K+++ + T+TIRLL+ K +G IIGK G + ++R+ + A + IS+G+ P
Sbjct: 33 MESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCP----- 87
Query: 436 NDELVEVVGEVGSVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
+ +V + G ++ A I + +D ++ + + PPV
Sbjct: 88 -ERIVTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPV 130
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Query: 552 PPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMS-DSKSSRGDRVALISGTPE 608
PP+TL ++VPA+ G +IGK GS + IR+ +GA ++++ D + +R ISGTP+
Sbjct: 128 PPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPD 185
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 40/66 (60%), Gaps = 3/66 (4%)
Query: 302 ASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDV-DDTKDNRDECVITVTAI 360
A+ + +R++ P ++ G +IGKGG IK IR+++GAQ+ V D N E +T++
Sbjct: 124 ATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISG- 182
Query: 361 ESPDDI 366
+PD I
Sbjct: 183 -TPDAI 187
>gi|426227471|ref|XP_004007841.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
isoform 1 [Ovis aries]
Length = 580
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/327 (22%), Positives = 142/327 (43%), Gaps = 48/327 (14%)
Query: 298 GLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITV 357
G V + +L +R+L P +G +IGK G TI++I + + ++IDV K+N ++
Sbjct: 186 GSVSKQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVH-RKENAGAAEKSI 244
Query: 358 TAIESPDDIKSMAVEAVLLLQTKIND-EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
T + +P+ + + ++ + D + + + +++L + +G +IGK G + +I +
Sbjct: 245 TILSTPEGTSAACKSILEIMHKEAQDIKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQ 304
Query: 417 RTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPV 476
T + IS + + + + V G V + A +I+ ++R+ D
Sbjct: 305 DTDTKITISPLQELTLYNP-ERTITVKGNVETCAKAEEEIMKKIRESYEND--------- 354
Query: 477 GADHIYSSGTGISMPP-----LLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSM 531
I S + P L PP GM +S G S
Sbjct: 355 ----IASMNLQAHLIPGLNLNALGLFPPTS--------------GMPPPTS----GPPSA 392
Query: 532 GDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSD 591
PY S T+ + +PA +VG +IGK G ++ + + +GA+I+++
Sbjct: 393 MTPPYPQFEQQSETE--------TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAP 444
Query: 592 SKSSRGD-RVALISGTPEQKRAAENLI 617
+++ R+ +I+G PE + A+ I
Sbjct: 445 AEAPDAKVRMVIITGPPEAQFKAQGRI 471
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 97/448 (21%), Positives = 181/448 (40%), Gaps = 96/448 (21%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKEDVEV 98
R+L P +G++IGK G I +I ++T++++ V GA ++ +TI S
Sbjct: 199 RLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILS---------- 248
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
E AA ++L++ + D K E+ +IL ++ +IGK
Sbjct: 249 -----TPEGTSAACKSILEI--------MHKEAQDIKFTEEIPLKILAHNNFVGRLIGKE 295
Query: 159 GATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKF 218
G +K++ T T I ++P + + + G E KA IM K
Sbjct: 296 GRNLKKIEQDTDTKITISPLQ-----ELTLYNPERTITVKGNVETCAKAE---EEIMKK- 346
Query: 219 SPREDIPLETTVREAPPSIIIPSDVPIYP-PG------GLYPNADPILPSRSVPSILGAA 271
+RE+ + I ++ + PG GL+P + P S P +A
Sbjct: 347 -----------IRESYENDIASMNLQAHLIPGLNLNALGLFPPTSGMPPPTSGPP---SA 392
Query: 272 RVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIK 331
P +P + QSE + + P +G +IGK G IK
Sbjct: 393 MTPP----------YPQFE------------QQSETETVHLFIPALSVGAIIGKQGQHIK 430
Query: 332 SIRQASGAQIDV--DDTKDNRDECVITVTAIESPDDIKSMA---VEAVLLLQTKINDEDD 386
+ + +GA I + + D + VI I P + + A + + + ++ +++
Sbjct: 431 QLSRFAGASIKIAPAEAPDAKVRMVI----ITGPPEAQFKAQGRIYGKIKEENFVSPKEE 486
Query: 387 DTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDE-LVEVVGE 445
+ + V S G +IGK G +NE++ + A+V + + P D ND+ +V++ G
Sbjct: 487 VKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEVVVPRDQTP---DENDQVVVKITGH 543
Query: 446 VGS-------VRDALVQIILRLRDDALK 466
+ +++ L Q+ + AL+
Sbjct: 544 FYACQVAQRKIQEILTQVKQHQQQKALQ 571
>gi|119615102|gb|EAW94696.1| insulin-like growth factor 2 mRNA binding protein 1, isoform CRA_b
[Homo sapiens]
Length = 463
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 147/332 (44%), Gaps = 47/332 (14%)
Query: 292 GLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRD 351
G + +G Q ++ +R+L P +G +IGK G TI++I + + ++IDV K+N
Sbjct: 66 GSPVAAGAPAKQQQVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDV-HRKENAG 124
Query: 352 ECVITVTAIESPDDIKSMAVEAVLLLQTKIND-EDDDTVTIRLLVSSKVIGCIIGKSGSI 410
++ +P+ S + ++ + D + D V +++L + +G +IGK G
Sbjct: 125 AAEKAISVHSTPEGCSSACKMILEIMHKEAKDTKTADEVPLKILAHNNFVGRLIGKEGRN 184
Query: 411 INEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDG 470
+ ++ + T+ + IS + + + V G + + A +I+ ++R+ D
Sbjct: 185 LKKVEQDTETKITISSLQDLTLYNP-ERTITVKGAIENCCRAEQEIMKKVREAYEND--- 240
Query: 471 SRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLS 530
V A + S L+P + + G+ SSS++ S
Sbjct: 241 -----VAAMSLQSH--------LIPGL-----------NLAAVGLFPASSSAVPPPPSSV 276
Query: 531 MGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATI--- 587
G +PY S + P ++V +PA AVG +IGK G ++ + + + A+I
Sbjct: 277 TGAAPYSS--------FMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIA 328
Query: 588 --EMSDSKSSRGDRVALISGTPEQKRAAENLI 617
E DSK R+ +I+G PE + A+ I
Sbjct: 329 PPETPDSKV----RMVIITGPPEAQFKAQGRI 356
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 96/438 (21%), Positives = 175/438 (39%), Gaps = 97/438 (22%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKEDVEV 98
R+L P +G++IGK G I +I ++T++++ V GA ++ ++++S
Sbjct: 85 RLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHS---------- 134
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
E +A +L++ + D K ++ +IL ++ +IGK
Sbjct: 135 -----TPEGCSSACKMILEI--------MHKEAKDTKTADEVPLKILAHNNFVGRLIGKE 181
Query: 159 GATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESE-----AVKKALFAISA 213
G +K++ T T I ++ + L + E A++ A
Sbjct: 182 GRNLKKVEQDTETKITIS-------------SLQDLTLYNPERTITVKGAIENCCRAEQE 228
Query: 214 IMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPN--ADPILPSRSVPSILGAA 271
IM K VREA Y N A L S +P L A
Sbjct: 229 IMKK------------VREA------------------YENDVAAMSLQSHLIPG-LNLA 257
Query: 272 RVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIK 331
V + P TG + S + A + E +++V P +G +IGK G IK
Sbjct: 258 AVGLFPASSSAVPPPPSSVTGAAPYSSFMQAPEQE--MVQVFIPAQAVGAIIGKKGQHIK 315
Query: 332 SIRQASGAQIDVD--DTKDNRDECVITVTAIESPDDIKSMA---VEAVLLLQTKINDEDD 386
+ + + A I + +T D++ VI I P + + A + L + +++
Sbjct: 316 QLSRFASASIKIAPPETPDSKVRMVI----ITGPPEAQFKAQGRIYGKLKEENFFGPKEE 371
Query: 387 DTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDE-LVEVVGE 445
+ + V + G +IGK G +NE++ T A+V + + P D ND+ +V+++G
Sbjct: 372 VKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQTP---DENDQVIVKIIGH 428
Query: 446 VGS-------VRDALVQI 456
+ +RD L Q+
Sbjct: 429 FYASQMAQRKIRDILAQV 446
Score = 42.7 bits (99), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 24/148 (16%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDP-FPGAKDRVVTIYSHVKDK 93
E + ++ P +G++IGK G+ I + + A +K+ P P +K R+V I
Sbjct: 290 EQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVII------- 342
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
+A K I + K + K E I VP+S +
Sbjct: 343 ---------------TGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGR 387
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+IGK G T+ L++ T + V P+D +
Sbjct: 388 VIGKGGKTVNELQNLTAAEV-VVPRDQT 414
>gi|320583120|gb|EFW97336.1| RNA binding protein, putative [Ogataea parapolymorpha DL-1]
Length = 404
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 135/316 (42%), Gaps = 38/316 (12%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSM 369
R+LC N+ ++GKGG TI I++ S A+++V + E VITV P +
Sbjct: 82 FRMLCSINETAAIVGKGGETINRIKEMSSARVNVSENLKGIPERVITV---RGPAE---Y 135
Query: 370 AVEAVLLLQTKINDE--------DDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKAD 421
+A L+ I DE + + ++LL +IG IIGK G+ EI + A
Sbjct: 136 VAKAFGLITRAIMDEPFNQASTVESKQINLKLLFPHTIIGYIIGKRGARFREIEDNSAAA 195
Query: 422 VRISKGDKPKCADANDELVEVVGEVGSVRDA---LVQIILRLRDDALK----DRDGSRNP 474
++ S P + D ++ + G ++ A + Q ++ + K + P
Sbjct: 196 LKASDQILPA---STDRILHITGVADAIHIATYYVAQTVIEHKQHLAKAVFYNPANCNQP 252
Query: 475 --PVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMG 532
PVG + G PP + +P P+ Q G + + G + ++
Sbjct: 253 STPVGGN-ASRMAYGNGYPPQVMQVP--APIM--QSPYMGQPVQQPYGQYIPGAAAGAVA 307
Query: 533 DSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDS 592
M + S + + ++ VP +G VIGK G NL +IR I+G ++++D
Sbjct: 308 APVPAPMQAQSGQ------EKINQDIYVPQMHIGLVIGKGGKNLKDIRTITGCYVKVNDE 361
Query: 593 KSSRGDR-VALISGTP 607
+R + L+S +P
Sbjct: 362 VPGATERKLTLMSTSP 377
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 83/362 (22%), Positives = 147/362 (40%), Gaps = 61/362 (16%)
Query: 37 VIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDV 96
V +R+LC +++GK G+ IN I++ + ARV V + G +RV+T+
Sbjct: 80 VHFRMLCSINETAAIVGKGGETINRIKEMSSARVNVSENLKGIPERVITVR--------- 130
Query: 97 EVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEE--CQILVPSSQSANI 154
+ + K I A+ + N E ++ ++L P + I
Sbjct: 131 -------------GPAEYVAKAFGLITRAIMDEPFNQASTVESKQINLKLLFPHTIIGYI 177
Query: 155 IGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAI 214
IGK GA + + + ++K + D P + D + I+G ++A+ A + ++
Sbjct: 178 IGKRGARFREIEDNSAAALKAS--DQILPAST-----DRILHITGVADAIHIATYYVAQT 230
Query: 215 MYKFSPREDIPLETTVREAPPSIIIPSDVPI------------YPPGGLYPNADPILPSR 262
+ + L V P + PS P+ YPP + A PI+ S
Sbjct: 231 VIEHKQH----LAKAVFYNPANCNQPS-TPVGGNASRMAYGNGYPPQVMQVPA-PIMQS- 283
Query: 263 SVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRV 322
+G P Q Y + + + + S E++ + P IG V
Sbjct: 284 ---PYMGQ---PVQQPYGQYIPGAAAGAVAAPVPAPMQAQSGQEKINQDIYVPQMHIGLV 337
Query: 323 IGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKIN 382
IGKGG +K IR +G + V+D E +T+ + SP I+ +A++L+ KI
Sbjct: 338 IGKGGKNLKDIRTITGCYVKVNDEVPGATERKLTLMST-SPFAIQ----QAIMLINNKIE 392
Query: 383 DE 384
+E
Sbjct: 393 NE 394
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 30/55 (54%)
Query: 34 EESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYS 88
+E + I P IG VIGK GK + IR T VKV D PGA +R +T+ S
Sbjct: 320 QEKINQDIYVPQMHIGLVIGKGGKNLKDIRTITGCYVKVNDEVPGATERKLTLMS 374
>gi|449303999|gb|EMD00007.1| hypothetical protein BAUCODRAFT_359485 [Baudoinia compniacensis
UAMH 10762]
Length = 471
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 90/381 (23%), Positives = 162/381 (42%), Gaps = 36/381 (9%)
Query: 255 ADPILPSRSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEE---LVIR 311
AD ++P P+ A P +Q NT G S G + +E L +R
Sbjct: 92 ADTVVPD--APTNGTATAGPPIQAAGHAPNTSHAGQNGRSGSQGPMPYHNQDETGWLHMR 149
Query: 312 VLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAV 371
+ + IGKGG + IR+ +GA+ V + E ++TV+ + ++A
Sbjct: 150 AIISSAEAATTIGKGGENVSQIRRLAGAKCTVSEYTRGAVERILTVSG-----HVDAVAK 204
Query: 372 EAVLLLQTKINDE--------DDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVR 423
L+++T +N E T +RLL+ +IG IIGK G I EI++ + A +
Sbjct: 205 AFGLIIRT-LNQEPLEEPSTPQSKTYPLRLLIPHILIGSIIGKQGVRIREIQEASGARLN 263
Query: 424 ISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGAD---- 479
S+ P + + + V+G +V A + L + L DR G P ++
Sbjct: 264 ASESCLPLSTERS---LVVLGVADAVHIATYYVGSTLVEQ-LTDRFGG---PAASNYAGR 316
Query: 480 HIYSSGTGISMPPLLPSIP--PVGPLGY-DQRADSGSGIGMLSSSSLYGYGSLSMGDSPY 536
H G ++P +P G +G+ D + YG +
Sbjct: 317 HGGPQGVVPGGMQVVPYVPQNAGGQMGHPDSYRKHAPPQQRTPAPGPYGMPYMHGQPPQQ 376
Query: 537 GSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSR 596
+ G P+T ++ +P + VG +IGK G+ + IR++SG+ I++++ + +
Sbjct: 377 QPQQGMPGMVPGQ---PITQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQDNN 433
Query: 597 GDRVALISGTPEQKRAAENLI 617
+R+ I+GT E + A ++
Sbjct: 434 NERLVTITGTQECNQMALYML 454
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 48/83 (57%), Gaps = 6/83 (7%)
Query: 306 EELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDD 365
+ + ++ P + +G +IGKGG I IRQ SG+ I +++ +DN +E ++T+T + +
Sbjct: 389 QPITQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQDNNNERLVTITGTQECNQ 448
Query: 366 IKSMAVEAVLLLQTKINDEDDDT 388
+ A+ +L +++ + ++
Sbjct: 449 M------ALYMLYSRLGESSKNS 465
>gi|119615099|gb|EAW94693.1| insulin-like growth factor 2 mRNA binding protein 1, isoform CRA_a
[Homo sapiens]
gi|119615100|gb|EAW94694.1| insulin-like growth factor 2 mRNA binding protein 1, isoform CRA_a
[Homo sapiens]
gi|119615101|gb|EAW94695.1| insulin-like growth factor 2 mRNA binding protein 1, isoform CRA_a
[Homo sapiens]
Length = 441
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 147/332 (44%), Gaps = 47/332 (14%)
Query: 292 GLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRD 351
G + +G Q ++ +R+L P +G +IGK G TI++I + + ++IDV K+N
Sbjct: 44 GSPVAAGAPAKQQQVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDV-HRKENAG 102
Query: 352 ECVITVTAIESPDDIKSMAVEAVLLLQTKIND-EDDDTVTIRLLVSSKVIGCIIGKSGSI 410
++ +P+ S + ++ + D + D V +++L + +G +IGK G
Sbjct: 103 AAEKAISVHSTPEGCSSACKMILEIMHKEAKDTKTADEVPLKILAHNNFVGRLIGKEGRN 162
Query: 411 INEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDG 470
+ ++ + T+ + IS + + + V G + + A +I+ ++R+ D
Sbjct: 163 LKKVEQDTETKITISSLQDLTLYNP-ERTITVKGAIENCCRAEQEIMKKVREAYEND--- 218
Query: 471 SRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLS 530
V A + S L+P + + G+ SSS++ S
Sbjct: 219 -----VAAMSLQSH--------LIPGL-----------NLAAVGLFPASSSAVPPPPSSV 254
Query: 531 MGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATI--- 587
G +PY S + P ++V +PA AVG +IGK G ++ + + + A+I
Sbjct: 255 TGAAPYSS--------FMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIA 306
Query: 588 --EMSDSKSSRGDRVALISGTPEQKRAAENLI 617
E DSK R+ +I+G PE + A+ I
Sbjct: 307 PPETPDSKV----RMVIITGPPEAQFKAQGRI 334
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 96/438 (21%), Positives = 175/438 (39%), Gaps = 97/438 (22%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKEDVEV 98
R+L P +G++IGK G I +I ++T++++ V GA ++ ++++S
Sbjct: 63 RLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHS---------- 112
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
E +A +L++ + D K ++ +IL ++ +IGK
Sbjct: 113 -----TPEGCSSACKMILEI--------MHKEAKDTKTADEVPLKILAHNNFVGRLIGKE 159
Query: 159 GATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESE-----AVKKALFAISA 213
G +K++ T T I ++ + L + E A++ A
Sbjct: 160 GRNLKKVEQDTETKITIS-------------SLQDLTLYNPERTITVKGAIENCCRAEQE 206
Query: 214 IMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPN--ADPILPSRSVPSILGAA 271
IM K VREA Y N A L S +P L A
Sbjct: 207 IMKK------------VREA------------------YENDVAAMSLQSHLIPG-LNLA 235
Query: 272 RVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIK 331
V + P TG + S + A + E +++V P +G +IGK G IK
Sbjct: 236 AVGLFPASSSAVPPPPSSVTGAAPYSSFMQAPEQE--MVQVFIPAQAVGAIIGKKGQHIK 293
Query: 332 SIRQASGAQIDVD--DTKDNRDECVITVTAIESPDDIKSMA---VEAVLLLQTKINDEDD 386
+ + + A I + +T D++ VI I P + + A + L + +++
Sbjct: 294 QLSRFASASIKIAPPETPDSKVRMVI----ITGPPEAQFKAQGRIYGKLKEENFFGPKEE 349
Query: 387 DTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDE-LVEVVGE 445
+ + V + G +IGK G +NE++ T A+V + + P D ND+ +V+++G
Sbjct: 350 VKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQTP---DENDQVIVKIIGH 406
Query: 446 VGS-------VRDALVQI 456
+ +RD L Q+
Sbjct: 407 FYASQMAQRKIRDILAQV 424
Score = 42.7 bits (99), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 24/148 (16%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDP-FPGAKDRVVTIYSHVKDK 93
E + ++ P +G++IGK G+ I + + A +K+ P P +K R+V I
Sbjct: 268 EQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVII------- 320
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
+A K I + K + K E I VP+S +
Sbjct: 321 ---------------TGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGR 365
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+IGK G T+ L++ T + V P+D +
Sbjct: 366 VIGKGGKTVNELQNLTAAEV-VVPRDQT 392
>gi|386771588|ref|NP_001246874.1| mushroom-body expressed, isoform I [Drosophila melanogaster]
gi|383292064|gb|AFH04545.1| mushroom-body expressed, isoform I [Drosophila melanogaster]
Length = 539
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 88/373 (23%), Positives = 154/373 (41%), Gaps = 73/373 (19%)
Query: 36 SVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKED 95
++ R++ +GS+IGK G+++N R+E+ A++ + D +R+VT+
Sbjct: 23 TLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDG--SCPERIVTV--------- 71
Query: 96 VEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANII 155
+A+ I D K K + +++VP+SQ ++I
Sbjct: 72 -------------SGTTNAIFSAFTLITKKFEEFNDVGKVGKTQIPIRLIVPASQCGSLI 118
Query: 156 GKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIM 215
GK+G+ IK +R T SI+V + T + V +SG +E + + ++ I +M
Sbjct: 119 GKSGSKIKEIRQTTGCSIQVASEMLPNST-------ERAVTLSGSAEQITQCIYQICLVM 171
Query: 216 YKFSPR-EDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVP 274
+ PR IP + P +I ++ + G Y +P++ V A+
Sbjct: 172 LESPPRGATIPYRPKPQVTGP--VILANGQAFTIQGNYA-----VPTQEVAKNPLASLAA 224
Query: 275 DLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNK--------------IG 320
+ +T + TG S + +R P N+ IG
Sbjct: 225 LGLAGMNPASTGGINHTG----SAPAALAALAGSQLRTANPANRAQQQQHEMTVSNDLIG 280
Query: 321 RVIGKGGGTIKSIRQASGAQIDVDDTKD----NRDECVITVTAIESPDDIK------SMA 370
+IGKGG I IRQ SGA I + + ++ N D T+T +PD + +M+
Sbjct: 281 CIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDR---TITISGNPDSVALAQYLINMS 337
Query: 371 VE---AVLLLQTK 380
VE A LL Q +
Sbjct: 338 VELQKANLLEQAQ 350
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 7/83 (8%)
Query: 381 INDEDDD-TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDEL 439
I ED T+TIRL++ K +G IIGK G I+N R+ + A + IS G P + +
Sbjct: 15 IKHEDPSVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCP------ERI 68
Query: 440 VEVVGEVGSVRDALVQIILRLRD 462
V V G ++ A I + +
Sbjct: 69 VTVSGTTNAIFSAFTLITKKFEE 91
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 557 EVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRG---DRVALISGTPEQKRAA 613
E+ V + +G +IGK G+ +A IR+ISGA I +S+ + G DR ISG P+ A
Sbjct: 271 EMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALA 330
Query: 614 ENLI 617
+ LI
Sbjct: 331 QYLI 334
>gi|7141072|gb|AAF37203.1|AF198254_1 mRNA-binding protein CRDBP [Homo sapiens]
Length = 577
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 147/333 (44%), Gaps = 49/333 (14%)
Query: 292 GLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRD 351
G + +G Q ++ +R+L P +G +IGK G TI++I + + ++IDV K+N
Sbjct: 180 GSPVAAGAPAKQQQVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDV-HRKENAG 238
Query: 352 ECVITVTAIESPDDIKSMAVEAVLLLQTKIND-EDDDTVTIRLLVSSKVIGCIIGKSGSI 410
++ +P+ S + ++ + D + D V ++ L + +G +IGK G
Sbjct: 239 AAEKAISVHSTPEGCSSACKMILEIMHKEAKDTKTADEVPLKTLAHNNFVGRLIGKEGRN 298
Query: 411 INEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDG 470
+ ++ + T+ + IS + + + V G + + A +I+ ++R+ D
Sbjct: 299 LKKVEQDTETKITISSLQDLTLYNP-ERTITVKGAIENCCRAEQEIMKKVREAYEND--- 354
Query: 471 SRNPPVGADHIYSSGT-GISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSL 529
V A + S T G+++ + G+ SSS++ S
Sbjct: 355 -----VAAMSLQSHLTPGLNL--------------------AAVGLFPASSSAVPPPPSS 389
Query: 530 SMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATI-- 587
G +PY S + P ++V +PA AVG +IGK G ++ + + + A+I
Sbjct: 390 VTGAAPYSS--------FMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKI 441
Query: 588 ---EMSDSKSSRGDRVALISGTPEQKRAAENLI 617
E DSK R+ +I+G PE + A+ I
Sbjct: 442 APPETPDSKV----RMVIITGPPEAQFKAQGRI 470
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 85/179 (47%), Gaps = 22/179 (12%)
Query: 291 TGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVD--DTKD 348
TG + S + A + E +++V P +G +IGK G IK + + + A I + +T D
Sbjct: 391 TGAAPYSSFMQAPEQE--MVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPD 448
Query: 349 NRDECVITVTAIESPDDIKSMA---VEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIG 405
++ VI I P + + A + L + +++ + + V + G +IG
Sbjct: 449 SKVRMVI----ITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIG 504
Query: 406 KSGSIINEIRKRTKADVRISKGDKPKCADANDE-LVEVVGEVGS-------VRDALVQI 456
K G +NE++ T A+V + + P D ND+ +V+++G + +RD L Q+
Sbjct: 505 KGGKTVNELQNLTAAEVVVPRDQTP---DENDQVIVKIIGHFYASQMAQRKIRDILAQV 560
Score = 45.8 bits (107), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 10/97 (10%)
Query: 138 EKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLI 197
E+E Q+ +P+ IIGK G IK+L SIK+ P + P M V+I
Sbjct: 404 EQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPET--PDSKVRM-----VII 456
Query: 198 SGESEAVKKALFAISAIMYK---FSPREDIPLETTVR 231
+G EA KA I + + F P+E++ LET +R
Sbjct: 457 TGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIR 493
Score = 42.7 bits (99), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 24/148 (16%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDP-FPGAKDRVVTIYSHVKDK 93
E + ++ P +G++IGK G+ I + + A +K+ P P +K R+V I
Sbjct: 404 EQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVII------- 456
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
+A K I + K + K E I VP+S +
Sbjct: 457 ---------------TGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGR 501
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+IGK G T+ L++ T + V P+D +
Sbjct: 502 VIGKGGKTVNELQNLTAAEV-VVPRDQT 528
>gi|297605767|ref|NP_001057572.2| Os06g0342500 [Oryza sativa Japonica Group]
gi|255677019|dbj|BAF19486.2| Os06g0342500 [Oryza sativa Japonica Group]
Length = 96
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 57/86 (66%)
Query: 538 SMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRG 597
++ S+S++ L TLEV++P +AV + +AGS LA I ++SGAT+ ++D +
Sbjct: 3 TLISFSTRFAVPLVTRSTLEVVIPKSAVASLTMRAGSKLAQISEMSGATVTLADERPDAI 62
Query: 598 DRVALISGTPEQKRAAENLIQAFIMA 623
++V ISGTPEQ A++L+Q FI++
Sbjct: 63 EKVVRISGTPEQADKAQSLLQGFILS 88
>gi|426237799|ref|XP_004012845.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
[Ovis aries]
Length = 576
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 146/332 (43%), Gaps = 48/332 (14%)
Query: 292 GLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRD 351
G + +G Q ++ +R+L P +G +IGK G TI++I + + ++IDV K+N
Sbjct: 180 GSPVAAGAPAKQQQVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDV-HRKENAG 238
Query: 352 ECVITVTAIESPDDIKSMAVEAVLLLQTKIND-EDDDTVTIRLLVSSKVIGCIIGKSGSI 410
++ +P+ S + ++ + D + D V +++L + +G +IGK G
Sbjct: 239 AAEKAISVHSTPEGCSSACKMILEIMHKEAKDTKTADEVPLKILAHNNFVGRLIGKEGRN 298
Query: 411 INEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDG 470
+ ++ + T+ + IS + + + V G + + A +I+ ++R+ D
Sbjct: 299 LKKVEQDTETKITISSLQDLTLYNP-ERTITVKGAIENCCRAEQEIMKKVREAYEND--- 354
Query: 471 SRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLS 530
V A + S L+P + + G+ SSS++ S
Sbjct: 355 -----VAAMSLQSH--------LIPGL-----------NLAAVGLFPASSSAVPPPPSSV 390
Query: 531 MGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATI--- 587
G +PY S P ++V +PA AVG +IGK G ++ + + + A+I
Sbjct: 391 TGAAPYSSFMX---------PEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIA 441
Query: 588 --EMSDSKSSRGDRVALISGTPEQKRAAENLI 617
E DSK R+ +I+G PE + A+ I
Sbjct: 442 PPETPDSKV----RMVIITGPPEAQFKAQGRI 469
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 96/433 (22%), Positives = 175/433 (40%), Gaps = 88/433 (20%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKEDVEV 98
R+L P +G++IGK G I +I ++T++++ V GA ++ ++++S
Sbjct: 199 RLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHS---------- 248
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
E +A +L++ + D K ++ +IL ++ +IGK
Sbjct: 249 -----TPEGCSSACKMILEI--------MHKEAKDTKTADEVPLKILAHNNFVGRLIGKE 295
Query: 159 GATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKF 218
G +K++ T T K+T + T + + + G A++ A IM K
Sbjct: 296 GRNLKKVEQDTET--KITISSLQDLT---LYNPERTITVKG---AIENCCRAEQEIMKK- 346
Query: 219 SPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPN--ADPILPSRSVPSILGAARVPDL 276
VREA Y N A L S +P L A V
Sbjct: 347 -----------VREA------------------YENDVAAMSLQSHLIPG-LNLAAVGLF 376
Query: 277 QGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQA 336
+ P TG + S + Q +++V P +G +IGK G IK + +
Sbjct: 377 PASSSAVPPPPSSVTGAAPYSSFMXPEQE---MVQVFIPAQAVGAIIGKKGQHIKQLSRF 433
Query: 337 SGAQIDVD--DTKDNRDECVITVTAIESPDDIKSMA---VEAVLLLQTKINDEDDDTVTI 391
+ A I + +T D++ VI I P + + A + L + +++ +
Sbjct: 434 ASASIKIAPPETPDSKVRMVI----ITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLET 489
Query: 392 RLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDE-LVEVVGEVGS-- 448
+ V + G +IGK G +NE++ T A+V + + P D ND+ +V+++G +
Sbjct: 490 HIRVPASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQTP---DENDQVIVKIIGHFYASQ 546
Query: 449 -----VRDALVQI 456
+RD L Q+
Sbjct: 547 MAQRKIRDILAQV 559
Score = 42.7 bits (99), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 24/148 (16%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDP-FPGAKDRVVTIYSHVKDK 93
E + ++ P +G++IGK G+ I + + A +K+ P P +K R+V I
Sbjct: 403 EQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVII------- 455
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
+A K I + K + K E I VP+S +
Sbjct: 456 ---------------TGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGR 500
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+IGK G T+ L++ T + V P+D +
Sbjct: 501 VIGKGGKTVNELQNLTAAEV-VVPRDQT 527
>gi|441656325|ref|XP_004093124.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein Nova-2
[Nomascus leucogenys]
Length = 500
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 86/175 (49%), Gaps = 21/175 (12%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD-----NRDECVITVTAIE 361
E ++VL P G +IGKGG TI +++ +GA I + +KD C++ TA E
Sbjct: 66 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTA-E 124
Query: 362 SPDDIKSMAVEAVL-------------LLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSG 408
+ + + S E V +LQ + D +L+V + G IIGK G
Sbjct: 125 ALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGG 184
Query: 409 SIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDD 463
+ + + +++ A V++S+ KP+ + + +V V GE V A+ I+ ++++D
Sbjct: 185 ATVKAVMEQSGAWVQLSQ--KPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQED 237
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 86/181 (47%), Gaps = 17/181 (9%)
Query: 34 EESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV---DPFPGAKDRVVTIYSHV 90
E ++L P GS+IGK G+ I +++ET A +K+ D +PG +RV +
Sbjct: 64 EGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTA 123
Query: 91 KDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQ 150
+ V +E A+ K + N + T + R ++ +++VP+S
Sbjct: 124 EALNAVHSFIAEKVRE----IPQAMTKPE--VVNILQPQTTMNPDR--AKQAKLIVPNST 175
Query: 151 SANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFA 210
+ IIGK GAT+K + ++ ++++ K ++ + V +SGE E V KA+ A
Sbjct: 176 AGLIIGKGGATVKAVMEQSGAWVQLSQKP-----EGINLQ-ERVVTVSGEPEQVHKAVSA 229
Query: 211 I 211
I
Sbjct: 230 I 230
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 42/69 (60%), Gaps = 7/69 (10%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSK---SSRGDRVALISGTPEQKRA 612
L+VL+P+ A G +IGK G + ++K +GATI++S SK +RV L+ GT E
Sbjct: 69 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAE---- 124
Query: 613 AENLIQAFI 621
A N + +FI
Sbjct: 125 ALNAVHSFI 133
>gi|332242549|ref|XP_003270447.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
isoform 1 [Nomascus leucogenys]
Length = 579
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/318 (21%), Positives = 140/318 (44%), Gaps = 49/318 (15%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
+L +R+L P +G +IGK G TI++I + + ++IDV K+N ++T + +P+
Sbjct: 195 DLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDV-HRKENAGAAEKSITILSTPEGT 253
Query: 367 KSMAVEAVLLLQTKIND-EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRIS 425
+ + ++ + D + + + +++L + +G +IGK G + +I + T + IS
Sbjct: 254 SAACKSILEIMHKEAQDIKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITIS 313
Query: 426 KGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSG 485
+ + + + V G V + A +I+ ++R+ D I S
Sbjct: 314 PLQELTLYNP-ERTITVKGSVETCAKAEEEIMKKIRESYEND-------------IASMN 359
Query: 486 TGISMPPLLP-----SIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMS 540
+ P L PP GM +S G S PY
Sbjct: 360 VQTHLIPGLNLNDLGLFPPTS--------------GMPPPTS----GPPSAMTPPYPQFE 401
Query: 541 SYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGD-R 599
++ T+ + +PA +VG +IGK G ++ + + +GA+I+++ +++ R
Sbjct: 402 QSETE---------TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVR 452
Query: 600 VALISGTPEQKRAAENLI 617
+ +I+G PE + A+ I
Sbjct: 453 MVIITGPPEAQFKAQGRI 470
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 97/444 (21%), Positives = 180/444 (40%), Gaps = 89/444 (20%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKEDVEV 98
R+L P +G++IGK G I +I ++T++++ V GA ++ +TI S
Sbjct: 199 RLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILS---------- 248
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
E AA ++L++ A D K E+ +IL ++ +IGK
Sbjct: 249 -----TPEGTSAACKSILEIMHKEAQ--------DIKFTEEIPLKILAHNNFVGRLIGKE 295
Query: 159 GATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKF 218
G +K++ T T I ++P + + + G E KA IM K
Sbjct: 296 GRNLKKIEQDTDTKITISPLQ-----ELTLYNPERTITVKGSVETCAKAE---EEIMKKI 347
Query: 219 --SPREDIPLETTVREAPPSIIIPSDVPIYPP-GGLYPNADPILPSRSVPSILGAARVPD 275
S DI P + + +D+ ++PP G+ P P+ PS +
Sbjct: 348 RESYENDIASMNVQTHLIPGLNL-NDLGLFPPTSGMPP------PTSGPPSAMTPP---- 396
Query: 276 LQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQ 335
+P + QSE + + P +G +IGK G IK + +
Sbjct: 397 ----------YPQFE-------------QSETETVHLFIPALSVGAIIGKQGQHIKQLSR 433
Query: 336 ASGAQIDV--DDTKDNRDECVITVTAIESPDDIKSMA---VEAVLLLQTKINDEDDDTVT 390
+GA I + + D + VI I P + + A + + + ++ +++ +
Sbjct: 434 FAGASIKIAPAEAPDAKVRMVI----ITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKLE 489
Query: 391 IRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDE-LVEVVGEVGS- 448
+ V S G +IGK G +NE++ + A+V + + P D ND+ +V++ G +
Sbjct: 490 AHIRVPSFAAGRVIGKGGKTVNELQNLSSAEVVVPRDQTP---DENDQVVVKITGHFYAC 546
Query: 449 ------VRDALVQIILRLRDDALK 466
+++ L Q+ + AL+
Sbjct: 547 QVAQRKIQEILTQVKQHQQQKALQ 570
>gi|431908994|gb|ELK12585.1| Insulin-like growth factor 2 mRNA-binding protein 3 [Pteropus
alecto]
Length = 613
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 139/318 (43%), Gaps = 48/318 (15%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
+L +R+L P +G +IGK G TI++I + + ++IDV K+N ++T + +P+
Sbjct: 195 DLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDV-HRKENAGAAEKSITILSTPEGT 253
Query: 367 KSMAVEAVLLLQTKIND-EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRIS 425
+ + ++ + D + + + +++L + +G +IGK G + +I + T + IS
Sbjct: 254 SAACKSILEIMHKEAQDIKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITIS 313
Query: 426 KGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSG 485
+ + + + V G V + A +I+ ++R+ D I S
Sbjct: 314 PLQELTLYNP-ERTITVKGSVETCAKAEEEIMKKIRESYEND-------------IASMN 359
Query: 486 TGISMPP-----LLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMS 540
+ P L PP GM +S G S PY
Sbjct: 360 LQAHLIPGLNLNALGLFPPTS--------------GMPPPTS----GPPSAMTPPYPQFE 401
Query: 541 SYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGD-R 599
S T+ + +PA +VG +IGK G ++ + + +GA+I+++ +++ R
Sbjct: 402 QQSET--------ETVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVR 453
Query: 600 VALISGTPEQKRAAENLI 617
+ +I+G PE + A+ I
Sbjct: 454 MVIITGPPEAQFKAQGRI 471
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 93/421 (22%), Positives = 167/421 (39%), Gaps = 95/421 (22%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKEDVEV 98
R+L P +G++IGK G I +I ++T++++ V GA ++ +TI S
Sbjct: 199 RLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILS---------- 248
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
E AA ++L++ A D K E+ +IL ++ +IGK
Sbjct: 249 -----TPEGTSAACKSILEIMHKEA--------QDIKFTEEIPLKILAHNNFVGRLIGKE 295
Query: 159 GATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKF 218
G +K++ T T I ++P + + + G E KA IM K
Sbjct: 296 GRNLKKIEQDTDTKITISPLQ-----ELTLYNPERTITVKGSVETCAKAE---EEIMKK- 346
Query: 219 SPREDIPLETTVREAPPSIIIPSDVPIYP-PG------GLYPNADPILPSRSVPSILGAA 271
+RE+ + I ++ + PG GL+P + P S P +A
Sbjct: 347 -----------IRESYENDIASMNLQAHLIPGLNLNALGLFPPTSGMPPPTSGPP---SA 392
Query: 272 RVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIK 331
P +P + QSE + + P +G +IGK G IK
Sbjct: 393 MTPP----------YPQFE------------QQSETETVHLFIPALSVGAIIGKQGQHIK 430
Query: 332 SIRQASGAQIDV--DDTKDNRDECVITVTAIESPDDIKSMA---VEAVLLLQTKINDEDD 386
+ + +GA I + + D + VI I P + + A + + + ++ +++
Sbjct: 431 QLSRFAGASIKIAPAEAPDAKVRMVI----ITGPPEAQFKAQGRIYGKIKEENFVSPKEE 486
Query: 387 DTVTIRLLVSSKVIGCIIGKSGSI-------INEIRKRTKADVRISKGDKPKCADANDEL 439
+ + V S G +IGK G +NE++ + A+V + + P D ND++
Sbjct: 487 VKLEAHIRVPSFAAGRVIGKGGKTASTSAKPVNELQNLSSAEVVVPRDQTP---DENDQV 543
Query: 440 V 440
V
Sbjct: 544 V 544
>gi|345785612|ref|XP_855043.2| PREDICTED: RNA-binding protein Nova-2 [Canis lupus familiaris]
Length = 597
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 86/175 (49%), Gaps = 21/175 (12%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD-----NRDECVITVTAIE 361
E ++VL P G +IGKGG TI +++ +GA I + +KD C++ TA E
Sbjct: 137 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTA-E 195
Query: 362 SPDDIKSMAVEAVL-------------LLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSG 408
+ + + S E V +LQ + D +L+V + G IIGK G
Sbjct: 196 ALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGG 255
Query: 409 SIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDD 463
+ + + +++ A V++S+ KP+ + + +V V GE V A+ I+ ++++D
Sbjct: 256 ATVKAVMEQSGAWVQLSQ--KPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQED 308
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 95/207 (45%), Gaps = 24/207 (11%)
Query: 8 YRSQRDNDRDGKNQKRRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETR 67
+ S D G N + R E + ++L P GS+IGK G+ I +++ET
Sbjct: 116 HTSVERTDTSGPNLQIRAEEGE-------YFLKVLIPSYAAGSIIGKGGQTIVQLQKETG 168
Query: 68 ARVKVV---DPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIAN 124
A +K+ D +PG +RV + E + F E + A+ K + N
Sbjct: 169 ATIKLSKSKDFYPGTTERVCLVQG---TAEALNAVHSF-IAEKVREIPQAMTKPE--VVN 222
Query: 125 AVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPT 184
+ T + R ++ +++VP+S + IIGK GAT+K + ++ ++++ K
Sbjct: 223 ILQPQTTMNPDR--AKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKP----- 275
Query: 185 HSCAMEFDNFVLISGESEAVKKALFAI 211
++ + V +SGE E V KA+ AI
Sbjct: 276 EGINLQ-ERVVTVSGEPEQVHKAVSAI 301
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 42/69 (60%), Gaps = 7/69 (10%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSK---SSRGDRVALISGTPEQKRA 612
L+VL+P+ A G +IGK G + ++K +GATI++S SK +RV L+ GT E
Sbjct: 140 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAE---- 195
Query: 613 AENLIQAFI 621
A N + +FI
Sbjct: 196 ALNAVHSFI 204
Score = 42.0 bits (97), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 5/66 (7%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDS----KSSRGDRVALISGTPEQKR 611
+E+ VP N VG ++GK G L ++++GA I++S +R RV I+G+P +
Sbjct: 514 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVT-ITGSPAATQ 572
Query: 612 AAENLI 617
AA+ LI
Sbjct: 573 AAQYLI 578
>gi|302766557|ref|XP_002966699.1| hypothetical protein SELMODRAFT_85231 [Selaginella moellendorffii]
gi|300166119|gb|EFJ32726.1| hypothetical protein SELMODRAFT_85231 [Selaginella moellendorffii]
Length = 324
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 134/323 (41%), Gaps = 67/323 (20%)
Query: 29 DEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV---DPFPGAKDRVVT 85
+ E + R L + GSVIGK G I+ + ++ AR+++ + FPG DRV
Sbjct: 7 ENNAGETTTNLRFLVTNTAAGSVIGKGGSTISDFQAQSGARIQLSRNHEYFPGTSDRVAV 66
Query: 86 IYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQIL 145
+ + D L A Q + K+ D+++ + + ++L
Sbjct: 67 LSGSLAD--------------VLTAFQLIISKI----------IKDDNQDDTKSIQVKLL 102
Query: 146 VPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVK 205
VP + IIGK G+ IK+ ++ SIK++ +D P D V I G + +
Sbjct: 103 VPKTVCGAIIGKGGSNIKKFVEDSQASIKLSSQDQLLPG-----VIDRIVTIGGNVDQII 157
Query: 206 KALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVP 265
K A++ I+ K + E ETT P+ +YP P S V
Sbjct: 158 K---AVTLILTKLT-EESSYTETT------------STPL-----VYPGTRPT--SFIVR 194
Query: 266 SILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGK 325
+ A+ P LQ G P + VGA S + + P IG ++G+
Sbjct: 195 CVYHAS--PGLQNLRRNGPGPP-------MPVAYVGALTSS---VTIGIPDEHIGFILGR 242
Query: 326 GGGTIKSIRQASGAQIDVDDTKD 348
G T++ ++Q+SGA+I V D D
Sbjct: 243 AGKTLQELQQSSGAKIKVSDRGD 265
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 130/314 (41%), Gaps = 69/314 (21%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIE-SPDDIKS 368
+R L G VIGKGG TI + SGA+I + + V + S D+
Sbjct: 17 LRFLVTNTAAGSVIGKGGSTISDFQAQSGARIQLSRNHEYFPGTSDRVAVLSGSLADV-- 74
Query: 369 MAVEAVLLLQTKI----NDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRI 424
+ A L+ +KI N +D ++ ++LLV V G IIGK GS I + + ++A +++
Sbjct: 75 --LTAFQLIISKIIKDDNQDDTKSIQVKLLVPKTVCGAIIGKGGSNIKKFVEDSQASIKL 132
Query: 425 SKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRD--------GSRNPPV 476
S D+ D +V + G V + A+ I+ +L +++ G+R
Sbjct: 133 SSQDQ-LLPGVIDRIVTIGGNVDQIIKAVTLILTKLTEESSYTETTSTPLVYPGTRPTSF 191
Query: 477 GADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPY 536
+Y + G+ PP+ P+ Y +G L+SS G
Sbjct: 192 IVRCVYHASPGLQNLRRNGPGPPM-PVAY---------VGALTSSVTIG----------- 230
Query: 537 GSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSR 596
+P +G ++G+AG L +++ SGA I++SD R
Sbjct: 231 -----------------------IPDEHIGFILGRAGKTLQELQQSSGAKIKVSD----R 263
Query: 597 GDRVALISGTPEQK 610
GD ++GT +K
Sbjct: 264 GD---FVTGTEYRK 274
Score = 40.0 bits (92), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 88/214 (41%), Gaps = 30/214 (14%)
Query: 24 RINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDP---FPGAK 80
+I + D + + +S+ ++L P V G++IGK G I ++++A +K+ PG
Sbjct: 84 KIIKDDNQDDTKSIQVKLLVPKTVCGAIIGKGGSNIKKFVEDSQASIKLSSQDQLLPGVI 143
Query: 81 DRVVTIYSHVKD--KEDVEVDDEFNDKEPLCAAQDALL-----KVHAAIANAVANATDND 133
DR+VTI +V K + + ++ L + + I V +A+
Sbjct: 144 DRIVTIGGNVDQIIKAVTLILTKLTEESSYTETTSTPLVYPGTRPTSFIVRCVYHASPGL 203
Query: 134 KKRKEK---------------EECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPK 178
+ + I +P I+G+AG T++ L+ + IKV+ +
Sbjct: 204 QNLRRNGPGPPMPVAYVGALTSSVTIGIPDEHIGFILGRAGKTLQELQQSSGAKIKVSDR 263
Query: 179 DASEPTHSCAMEFDNFVLISGESEAVKKALFAIS 212
E+ +I G EA++ A F ++
Sbjct: 264 G----DFVTGTEYRKVTMI-GSGEAIQAAQFLLT 292
Score = 39.3 bits (90), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS---SRGDRVALISGTPEQKRA 612
L LV A G VIGK GS +++ + SGA I++S + DRVA++SG+
Sbjct: 17 LRFLVTNTAAGSVIGKGGSTISDFQAQSGARIQLSRNHEYFPGTSDRVAVLSGSLADVLT 76
Query: 613 AENLI 617
A LI
Sbjct: 77 AFQLI 81
>gi|147901405|ref|NP_001084264.1| poly(rC) binding protein 2 [Xenopus laevis]
gi|5459450|emb|CAB50743.1| hnRNP-E2 protein [Xenopus laevis]
Length = 353
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 155/338 (45%), Gaps = 40/338 (11%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
L IR+L ++G +IGK G ++K +R+ SGA+I++ + N E +IT+ P +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLAG---PTNAI 68
Query: 368 SMAVEAVL-LLQTKINDEDDDT-------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
A ++ L+ I+ ++ VT+RL+V + G +IGK G I EIR+ T
Sbjct: 69 FKAFSMIIDKLEEDISSSMTNSTASSKPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTG 128
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGAD 479
A V+++ P ++ + + + G S+ + + QI + + + K P +
Sbjct: 129 AQVQVAGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSS 185
Query: 480 HIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYG-------------- 525
+ +G +S + L +R+ +G G+ L + L+G
Sbjct: 186 PVIFAGGQVSRQAGGHACET--DLWEGRRSHTG-GVS-LDAVDLHGAYTIQGQYAIPQPD 241
Query: 526 ---YGSLSMGDSPYGSMSSYSSKLYGGL---PPPLTLEVLVPANAVGKVIGKAGSNLANI 579
L+M S + S ++ GG+ + E+ +P + +G +IG+ G+ + I
Sbjct: 242 LTKLHQLAMQQSHFPMSHSGNTGFSGGIDASAQTTSHELTIPNDLIGCIIGRQGAKINEI 301
Query: 580 RKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLI 617
R++SGA I++++ DR I+G+ A+ LI
Sbjct: 302 RQMSGAQIKIANPVEGSNDRQVTITGSTASISLAQYLI 339
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 82/358 (22%), Positives = 147/358 (41%), Gaps = 65/358 (18%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH 89
E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R++T
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIIT---- 60
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAV-----ANATDNDKKRKEKEECQI 144
L +A+ K + I + + ++ T++ K ++
Sbjct: 61 ------------------LAGPTNAIFKAFSMIIDKLEEDISSSMTNSTASSKPPVTLRL 102
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAV 204
+VP+SQ ++IGK G IK +R T ++V T + + I+G +++
Sbjct: 103 VVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNST-------ERAITIAGIPQSI 155
Query: 205 KKALFAISAIMYKFSPRE-DIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRS 263
+ + I +M + P+ IP +P +I GG D RS
Sbjct: 156 IECVKQICVVMLESPPKGVTIPYRPKPSSSP--VIFAGGQVSRQAGGHACETDLWEGRRS 213
Query: 264 --------------VPSILGAARVPD-----LQGYADTGNTWPVYSTGLSLVSGLVGAS- 303
+I G +P L A + +P+ +G + SG + AS
Sbjct: 214 HTGGVSLDAVDLHGAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMSHSGNTGFSGGIDASA 273
Query: 304 --QSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTA 359
S EL I P + IG +IG+ G I IRQ SGAQI + + + ++ +T+T
Sbjct: 274 QTTSHELTI----PNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSNDRQVTITG 327
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 51/92 (55%), Gaps = 9/92 (9%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+TIRLL+ K +G IIGK G + ++R+ + A + IS+G+ P + ++ + G
Sbjct: 13 TLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCP------ERIITLAGPTN 66
Query: 448 SVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
++ A II +L +D ++ + S PPV
Sbjct: 67 AIFKAFSMIIDKLEEDISSSMTNSTASSKPPV 98
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query: 383 DEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEV 442
D T + L + + +IGCIIG+ G+ INEIR+ + A ++I+ +ND V +
Sbjct: 270 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN----PVEGSNDRQVTI 325
Query: 443 VGEVGSVRDALVQIILRLRDDA 464
G S+ A I +RL +A
Sbjct: 326 TGSTASISLAQYLINVRLSSEA 347
Score = 43.1 bits (100), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 302 ASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDV-DDTKDNRDECVITVTAI 360
AS + +R++ P ++ G +IGKGG IK IR+++GAQ+ V D N E IT+ I
Sbjct: 92 ASSKPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGI 151
>gi|345306114|ref|XP_001507404.2| PREDICTED: far upstream element-binding protein 3 [Ornithorhynchus
anatinus]
Length = 590
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 141/348 (40%), Gaps = 56/348 (16%)
Query: 315 PFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDE--CVITVT--AIESPDDIKSMA 370
P +G +IG+GG I I+ SG +I + E CV+T T +IE +
Sbjct: 104 PDKMVGFIIGRGGEQISRIQAESGCKIQIAPDSGGMPERPCVLTGTPESIEQAKRLLGQI 163
Query: 371 VEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKAD-VRISKGDK 429
V+ ND D ++ +L+ + +G +IGK G I ++++RT + I G
Sbjct: 164 VDRCRNGPGFHNDVDGNSTIQEILIPASKVGLVIGKGGETIKQLQERTGVKMIMIQDGPL 223
Query: 430 PKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSGTG-- 487
P AD + + + GE V+ A ++ +R+ D G V +D G G
Sbjct: 224 PTGAD---KPLRITGEPFKVQQAREMVLEIIREKDQADFRG-----VRSDFSSRMGGGSI 275
Query: 488 -ISMPPLLPSI-------------------------PPVGP------LGYDQRADSGSGI 515
+S+P I + P +G R + I
Sbjct: 276 EVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPERVAQVMGLPDRCQHAAHI 335
Query: 516 ---GMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKA 572
+L++ G+GSL++ +S GG+ + VPA+ G VIGK
Sbjct: 336 INELILTAQERDGFGSLAVARGRGRGRGDWSVGTPGGM---QEITYTVPADKCGLVIGKG 392
Query: 573 GSNLANIRKISGATIEMSDSKSSRGD---RVALISGTPEQKRAAENLI 617
G N+ +I + SGA +E+ + D R+ I G P+Q A +LI
Sbjct: 393 GENIKSINQQSGAHVELQRNPPPNTDPSVRIFTIRGVPQQIELARHLI 440
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 537 GSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSR 596
G S +SS++ GG ++EV VP AVG VIG+ G + I+ +G I+
Sbjct: 261 GVRSDFSSRMGGG-----SIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGIS 315
Query: 597 GDRVALISGTPEQKRAAENLIQAFIM 622
+RVA + G P++ + A ++I I+
Sbjct: 316 PERVAQVMGLPDRCQHAAHIINELIL 341
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 35/64 (54%)
Query: 554 LTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAA 613
+T E VP VG +IG+ G ++ I+ SG I+++ +R +++GTPE A
Sbjct: 97 ITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIAPDSGGMPERPCVLTGTPESIEQA 156
Query: 614 ENLI 617
+ L+
Sbjct: 157 KRLL 160
>gi|440901500|gb|ELR52431.1| Insulin-like growth factor 2 mRNA-binding protein 3 [Bos grunniens
mutus]
Length = 600
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 146/322 (45%), Gaps = 38/322 (11%)
Query: 298 GLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITV 357
G V + +L +R+L P +G +IGK G TI++I + + ++IDV K+N ++
Sbjct: 186 GSVSKQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHR-KENAGAAEKSI 244
Query: 358 TAIESPDDIKSMAVEAVLLLQTKIND-EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
T + +P+ + + ++ + D + + + +++L + +G +IGK G + +I +
Sbjct: 245 TILSTPEGTSAACKSILEIMHKEAQDIKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQ 304
Query: 417 RTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPV 476
T + IS + + + + V G V + A +I+ ++R+ D S N +
Sbjct: 305 DTDTKITISPLQELTLYNP-ERTITVKGNVETCAKAEEEIMKKIRESYEND-IASMN--L 360
Query: 477 GADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPY 536
A I G ++ L PP GM +S G S PY
Sbjct: 361 QAHLI--PGLNLNA---LGLFPPTS--------------GMPPPTS----GPPSAITPPY 397
Query: 537 GSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSR 596
S T+ + +PA +VG +IGK G ++ + + +GA+I+++ +++
Sbjct: 398 PQFEQQSETE--------TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPD 449
Query: 597 GD-RVALISGTPEQKRAAENLI 617
R+ +I+G PE + A+ I
Sbjct: 450 AKVRMVIITGPPEAQFKAQGRI 471
Score = 45.4 bits (106), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 82/383 (21%), Positives = 142/383 (37%), Gaps = 91/383 (23%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKEDVEV 98
R+L P +G++IGK G I +I ++T++++ V GA ++ +TI S
Sbjct: 199 RLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILS---------- 248
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
E AA ++L+ + + D K E+ +IL ++ +IGK
Sbjct: 249 -----TPEGTSAACKSILE--------IMHKEAQDIKFTEEIPLKILAHNNFVGRLIGKE 295
Query: 159 GATIKRLRSKTRTSIKVTPKDA---SEPTHSCAMEFDNFVLISGESEAVKK--------- 206
G +K++ T T I ++P P + ++ + E E +KK
Sbjct: 296 GRNLKKIEQDTDTKITISPLQELTLYNPERTITVKGNVETCAKAEEEIMKKIRESYENDI 355
Query: 207 ALFAISAIMYK---------FSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADP 257
A + A + F P +P T+ PPS I P P +
Sbjct: 356 ASMNLQAHLIPGLNLNALGLFPPTSGMPPPTS---GPPSAITPP-YPQFEQQSETETVHL 411
Query: 258 ILPSRSVPSILG--AARVPDLQGYADTG-----NTWPVYSTGLSLVSG------------ 298
+P+ SV +I+G + L +A P + +++G
Sbjct: 412 FIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEAQFKAQGRI 471
Query: 299 --------LVGASQSEELVIRVLCPFNKIGRVIGKGGGT-------------IKSIRQAS 337
V + +L + P GRVIGKGG T + ++ S
Sbjct: 472 YGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTAIPLNVISVYLLQVNELQNLS 531
Query: 338 GAQIDV--DDTKDNRDECVITVT 358
A++ V D T D D+ V+ +T
Sbjct: 532 SAEVVVPRDQTPDENDQVVVKIT 554
>gi|2105469|gb|AAC35208.1| putative RNA binding protein KOC [Homo sapiens]
gi|4098297|gb|AAD09223.1| Koc1 [Homo sapiens]
Length = 579
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 146/322 (45%), Gaps = 39/322 (12%)
Query: 298 GLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITV 357
G V + +L +R+L P +G +IGK G TI++I + + ++IDV K+N ++
Sbjct: 186 GSVSKQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDV-HRKENAGAAEKSI 244
Query: 358 TAIESPDDIKSMAVEAVLLLQTKIND-EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
T + +P+ + + ++ + D + + + +++L + +G +IGK G + +I +
Sbjct: 245 TILSTPEGTSAACKSILEIMHKEAQDIKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQ 304
Query: 417 RTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPV 476
T + IS + + + + V G V + A +I+ ++R+ D S N +
Sbjct: 305 DTDTKITISPLQELTLYNP-ERTITVKGNVETCAKAEEEIMKKIRESYEND-IASMN--L 360
Query: 477 GADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPY 536
A I G ++ L PP GM +S G S PY
Sbjct: 361 QAHLI--PGLNLNA---LGLFPPTS--------------GMPPPTS----GPPSAMTPPY 397
Query: 537 GSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSR 596
++ T+ +PA +VG +IGK G ++ + + +GA+I+++ +++
Sbjct: 398 PQFEQSETE---------TVHQFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPD 448
Query: 597 GD-RVALISGTPEQKRAAENLI 617
R+ +I+G PE + A+ I
Sbjct: 449 AKVRMVIITGPPEAQFKAQGRI 470
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 95/441 (21%), Positives = 175/441 (39%), Gaps = 83/441 (18%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKEDVEV 98
R+L P +G++IGK G I +I ++T++++ V GA ++ +TI S
Sbjct: 199 RLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILS---------- 248
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
E AA ++L++ A D K E+ +IL ++ +IGK
Sbjct: 249 -----TPEGTSAACKSILEIMHKEAQ--------DIKFTEEIPLKILAHNNFVGRLIGKE 295
Query: 159 GATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKF 218
G +K++ T T I ++P + + + G E KA IM K
Sbjct: 296 GRNLKKIEQDTDTKITISPLQ-----ELTLYNPERTITVKGNVETCAKAE---EEIMKK- 346
Query: 219 SPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQG 278
+RE+ + I ++ + GL NA + P S
Sbjct: 347 -----------IRESYENDIASMNLQAHLIPGLNLNALGLFPPTS--------------- 380
Query: 279 YADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASG 338
G P ++ QSE + P +G +IGK G IK + + +G
Sbjct: 381 ----GMPPPTSGPPSAMTPPYPQFEQSETETVHQFIPALSVGAIIGKQGQHIKQLSRFAG 436
Query: 339 AQIDV--DDTKDNRDECVITVTAIESPDDIKSMA---VEAVLLLQTKINDEDDDTVTIRL 393
A I + + D + VI I P + + A + + + ++ +++ + +
Sbjct: 437 ASIKIAPAEAPDAKVRMVI----ITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHI 492
Query: 394 LVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDE-LVEVVGEVGS---- 448
V S G +IGK G +NE++ + A+V + + P D ND+ +V++ G +
Sbjct: 493 RVPSFAAGRVIGKGGKTVNELQNLSSAEVVVPRDQTP---DENDQVVVKITGHFYACQVA 549
Query: 449 ---VRDALVQIILRLRDDALK 466
+++ L Q+ + AL+
Sbjct: 550 QRKIQEILTQVKQHQQQKALQ 570
>gi|406608142|emb|CCH40576.1| Poly(rC)-binding protein 2 [Wickerhamomyces ciferrii]
Length = 457
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 137/337 (40%), Gaps = 33/337 (9%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTA-IESPDDIKS 368
R+LC + V+GKGG I I++ SG +I+V + E VI V E+
Sbjct: 89 FRMLCQVKEAALVVGKGGEKISHIKEVSGTRINVSENIRGVTERVIHVRGPAENVAKAFG 148
Query: 369 MAVEAVLLLQTKI-NDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKG 427
+ A+L + + + D ++LL+ +VIG +IGK G EI + + A + S
Sbjct: 149 LMTRAILDEEENVPSTVDSHHFALQLLIPHQVIGYVIGKQGGKFKEIEENSAAKLNASSH 208
Query: 428 DKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNP-PVGADHIYSSGT 486
P D + V + + Q +L + + K + +P H
Sbjct: 209 SMPFSTDRCLTIAGVADSIHIATYYVAQTVLTHKPN-FKGKVIFYDPGQQHQHHQQQQQQ 267
Query: 487 GISMPPLL-----PSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLS----------- 530
+++P P +PP PL ++ + G + L + + +
Sbjct: 268 HLNLPQHHLQHHQPGLPP-NPLLFNGMMNFGQ-LPQFDQRQLLQFNNFARPQHNRNHNGK 325
Query: 531 MGDSPYGSMS----------SYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIR 580
P SM+ + S+ GG P +T E+ +P VG VIGK+G N+ I+
Sbjct: 326 FQQRPPFSMNVPINPLTLPLASSTGGVGGSP-QITQEIFIPNEYVGNVIGKSGKNIKLIK 384
Query: 581 KISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLI 617
SG+ I+++D +R + GT + A LI
Sbjct: 385 DTSGSKIQIADPNPESKERKITLVGTSAGNQTAIFLI 421
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 73/381 (19%), Positives = 134/381 (35%), Gaps = 64/381 (16%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH 89
+ G+ V +R+LC V+GK G+ I+ I++ + R+ V + G +RV+ H
Sbjct: 80 QDGDPTYVHFRMLCQVKEAALVVGKGGEKISHIKEVSGTRINVSENIRGVTERVI----H 135
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEE--CQILVP 147
V+ + + K + A+ + +N + Q+L+P
Sbjct: 136 VR------------------GPAENVAKAFGLMTRAILDEEENVPSTVDSHHFALQLLIP 177
Query: 148 SSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKA 207
+IGK G K + + + + +HS D + I+G ++++ A
Sbjct: 178 HQVIGYVIGKQGGKFKEIEENSAAKLNAS-------SHSMPFSTDRCLTIAGVADSIHIA 230
Query: 208 LFAISAIMYKFSPR--------------EDIPLETTVREAPPSIIIPSDVPIYPPGGLYP 253
+ ++ + P + + P + P PP L
Sbjct: 231 TYYVAQTVLTHKPNFKGKVIFYDPGQQHQHHQQQQQQHLNLPQHHLQHHQPGLPPNPLLF 290
Query: 254 NAD------PILPSRSVPSILGAARVPDLQGYADTGNTWPVYSTG-------LSLVSGLV 300
N P R + AR + + P +S L L S
Sbjct: 291 NGMMNFGQLPQFDQRQLLQFNNFARPQHNRNHNGKFQQRPPFSMNVPINPLTLPLASSTG 350
Query: 301 GASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAI 360
G S ++ + P +G VIGK G IK I+ SG++I + D E IT+
Sbjct: 351 GVGGSPQITQEIFIPNEYVGNVIGKSGKNIKLIKDTSGSKIQIADPNPESKERKITLVGT 410
Query: 361 ESPDDIKSMAVEAVLLLQTKI 381
+ + A+ L+ +I
Sbjct: 411 SAGNQT------AIFLINNRI 425
>gi|300796214|ref|NP_001179217.1| insulin-like growth factor 2 mRNA-binding protein 3 [Bos taurus]
gi|296488613|tpg|DAA30726.1| TPA: insulin-like growth factor 2 mRNA binding protein 3 [Bos
taurus]
Length = 580
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/327 (22%), Positives = 142/327 (43%), Gaps = 48/327 (14%)
Query: 298 GLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITV 357
G V + +L +R+L P +G +IGK G TI++I + + ++IDV K+N ++
Sbjct: 186 GSVSKQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVH-RKENAGAAEKSI 244
Query: 358 TAIESPDDIKSMAVEAVLLLQTKIND-EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
T + +P+ + + ++ + D + + + +++L + +G +IGK G + +I +
Sbjct: 245 TILSTPEGTSAACKSILEIMHKEAQDIKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQ 304
Query: 417 RTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPV 476
T + IS + + + + V G V + A +I+ ++R+ D
Sbjct: 305 DTDTKITISPLQELTLYNP-ERTITVKGNVETCAKAEEEIMKKIRESYEND--------- 354
Query: 477 GADHIYSSGTGISMPP-----LLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSM 531
I S + P L PP GM +S G S
Sbjct: 355 ----IASMNLQAHLIPGLNLNALGLFPPTS--------------GMPPPTS----GPPSA 392
Query: 532 GDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSD 591
PY S T+ + +PA +VG +IGK G ++ + + +GA+I+++
Sbjct: 393 ITPPYPQFEQQSETE--------TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAP 444
Query: 592 SKSSRGD-RVALISGTPEQKRAAENLI 617
+++ R+ +I+G PE + A+ I
Sbjct: 445 AEAPDAKVRMVIITGPPEAQFKAQGRI 471
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 97/448 (21%), Positives = 181/448 (40%), Gaps = 96/448 (21%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKEDVEV 98
R+L P +G++IGK G I +I ++T++++ V GA ++ +TI S
Sbjct: 199 RLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILS---------- 248
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
E AA ++L++ + D K E+ +IL ++ +IGK
Sbjct: 249 -----TPEGTSAACKSILEI--------MHKEAQDIKFTEEIPLKILAHNNFVGRLIGKE 295
Query: 159 GATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKF 218
G +K++ T T I ++P + + + G E KA IM K
Sbjct: 296 GRNLKKIEQDTDTKITISPLQ-----ELTLYNPERTITVKGNVETCAKAE---EEIMKK- 346
Query: 219 SPREDIPLETTVREAPPSIIIPSDVPIYP-PG------GLYPNADPILPSRSVPSILGAA 271
+RE+ + I ++ + PG GL+P + P S P +A
Sbjct: 347 -----------IRESYENDIASMNLQAHLIPGLNLNALGLFPPTSGMPPPTSGPP---SA 392
Query: 272 RVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIK 331
P +P + QSE + + P +G +IGK G IK
Sbjct: 393 ITPP----------YPQFE------------QQSETETVHLFIPALSVGAIIGKQGQHIK 430
Query: 332 SIRQASGAQIDV--DDTKDNRDECVITVTAIESPDDIKSMA---VEAVLLLQTKINDEDD 386
+ + +GA I + + D + VI I P + + A + + + ++ +++
Sbjct: 431 QLSRFAGASIKIAPAEAPDAKVRMVI----ITGPPEAQFKAQGRIYGKIKEENFVSPKEE 486
Query: 387 DTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDE-LVEVVGE 445
+ + V S G +IGK G +NE++ + A+V + + P D ND+ +V++ G
Sbjct: 487 VKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEVVVPRDQTP---DENDQVVVKITGH 543
Query: 446 VGS-------VRDALVQIILRLRDDALK 466
+ +++ L Q+ + AL+
Sbjct: 544 FYACQVAQRKIQEILTQVKQHQQQKALQ 571
>gi|6753518|ref|NP_034081.1| insulin-like growth factor 2 mRNA-binding protein 1 [Mus musculus]
gi|81908461|sp|O88477.1|IF2B1_MOUSE RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 1;
Short=IGF2 mRNA-binding protein 1; Short=IMP-1; AltName:
Full=Coding region determinant-binding protein;
Short=CRD-BP; AltName: Full=IGF-II mRNA-binding protein
1; AltName: Full=VICKZ family member 1
gi|3273749|gb|AAC72743.1| coding region determinant binding protein [Mus musculus]
gi|12851514|dbj|BAB29071.1| unnamed protein product [Mus musculus]
gi|148684057|gb|EDL16004.1| insulin-like growth factor 2 mRNA binding protein 1 [Mus musculus]
Length = 577
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 147/332 (44%), Gaps = 47/332 (14%)
Query: 292 GLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRD 351
G + +G Q ++ +R+L P +G +IGK G TI++I + + ++IDV K+N
Sbjct: 180 GSPVAAGAPAKQQPVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDV-HRKENAG 238
Query: 352 ECVITVTAIESPDDIKSMAVEAVLLLQTKIND-EDDDTVTIRLLVSSKVIGCIIGKSGSI 410
++ +P+ S + ++ + D + D V +++L + +G +IGK G
Sbjct: 239 AAEKAISVHSTPEGCSSACKMILEIMHKEAKDTKTADEVPLKILAHNNFVGRLIGKEGRN 298
Query: 411 INEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDG 470
+ ++ + T+ + IS + + + V G + + A +I+ ++R+ D
Sbjct: 299 LKKVEQDTETKITISSLQDLTLYNP-ERTITVKGAIENCCRAEQEIMKKVREAYEND--- 354
Query: 471 SRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLS 530
V A + S L+P + + G+ SSS++ S
Sbjct: 355 -----VAAMSLQSH--------LIPGL-----------NLAAVGLFPASSSAVPPPPSSV 390
Query: 531 MGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATI--- 587
G +PY S + P ++V +PA AVG +IGK G ++ + + + A+I
Sbjct: 391 TGAAPYSS--------FMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIA 442
Query: 588 --EMSDSKSSRGDRVALISGTPEQKRAAENLI 617
E DSK R+ +I+G PE + A+ I
Sbjct: 443 PPETPDSKV----RMVVITGPPEAQFKAQGRI 470
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 95/438 (21%), Positives = 175/438 (39%), Gaps = 97/438 (22%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKEDVEV 98
R+L P +G++IGK G I +I ++T++++ V GA ++ ++++S
Sbjct: 199 RLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHS---------- 248
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
E +A +L++ + D K ++ +IL ++ +IGK
Sbjct: 249 -----TPEGCSSACKMILEI--------MHKEAKDTKTADEVPLKILAHNNFVGRLIGKE 295
Query: 159 GATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESE-----AVKKALFAISA 213
G +K++ T T I ++ + L + E A++ A
Sbjct: 296 GRNLKKVEQDTETKITIS-------------SLQDLTLYNPERTITVKGAIENCCRAEQE 342
Query: 214 IMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPN--ADPILPSRSVPSILGAA 271
IM K VREA Y N A L S +P L A
Sbjct: 343 IMKK------------VREA------------------YENDVAAMSLQSHLIPG-LNLA 371
Query: 272 RVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIK 331
V + P TG + S + A + E +++V P +G +IGK G IK
Sbjct: 372 AVGLFPASSSAVPPPPSSVTGAAPYSSFMQAPEQE--MVQVFIPAQAVGAIIGKKGQHIK 429
Query: 332 SIRQASGAQIDVD--DTKDNRDECVITVTAIESPDDIKSMA---VEAVLLLQTKINDEDD 386
+ + + A I + +T D++ V+ I P + + A + L + +++
Sbjct: 430 QLSRFASASIKIAPPETPDSKVRMVV----ITGPPEAQFKAQGRIYGKLKEENFFGPKEE 485
Query: 387 DTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDE-LVEVVGE 445
+ + V + G +IGK G +NE++ T A+V + + P D ND+ +V+++G
Sbjct: 486 VKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQTP---DENDQVIVKIIGH 542
Query: 446 VGS-------VRDALVQI 456
+ +RD L Q+
Sbjct: 543 FYASQMAQRKIRDILAQV 560
Score = 43.1 bits (100), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 24/148 (16%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDP-FPGAKDRVVTIYSHVKDK 93
E + ++ P +G++IGK G+ I + + A +K+ P P +K R+V I
Sbjct: 404 EQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVVI------- 456
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
+A K I + K + K E I VP+S +
Sbjct: 457 ---------------TGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGR 501
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+IGK G T+ L++ T + V P+D +
Sbjct: 502 VIGKGGKTVNELQNLTAAEV-VVPRDQT 528
>gi|351713542|gb|EHB16461.1| Insulin-like growth factor 2 mRNA-binding protein 1 [Heterocephalus
glaber]
Length = 577
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 146/332 (43%), Gaps = 47/332 (14%)
Query: 292 GLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRD 351
G + +G Q ++ +R+L P +G +IGK G TI++I + + ++IDV K+N
Sbjct: 180 GSPVAAGAPAKQQQVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDV-HRKENAG 238
Query: 352 ECVITVTAIESPDDIKSMAVEAVLLLQTKIND-EDDDTVTIRLLVSSKVIGCIIGKSGSI 410
++ +P+ S + ++ + D + D V +++L + +G +IGK G
Sbjct: 239 AAEKAISVHSTPEGCSSACRMILEIMHKEAKDTKTADEVPLKILAHNNFVGRLIGKEGRN 298
Query: 411 INEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDG 470
+ ++ + T+ + IS + + + V G + + A +I ++R+ D
Sbjct: 299 LKKVEQDTETKITISSLQDLTLYNP-ERTITVKGAIENCCRAEQEITKKVREAYEND--- 354
Query: 471 SRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLS 530
V A + S L+P + + G+ SSS++ S
Sbjct: 355 -----VAAMSLQSH--------LIPGL-----------NLAAVGLFPASSSAVPPPPSSV 390
Query: 531 MGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATI--- 587
G +PY S + P ++V +PA AVG +IGK G ++ + + + A+I
Sbjct: 391 SGAAPYSS--------FMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIA 442
Query: 588 --EMSDSKSSRGDRVALISGTPEQKRAAENLI 617
E DSK R+ +I+G PE + A+ I
Sbjct: 443 PPETPDSKV----RMVIITGPPEAQFKAQGRI 470
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 79/164 (48%), Gaps = 20/164 (12%)
Query: 306 EELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVD--DTKDNRDECVITVTAIESP 363
E+ +++V P +G +IGK G IK + + + A I + +T D++ VI I P
Sbjct: 404 EQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVI----ITGP 459
Query: 364 DDIKSMA---VEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKA 420
+ + A + L + +++ + + V + G +IGK G +NE++ T A
Sbjct: 460 PEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAA 519
Query: 421 DVRISKGDKPKCADANDE-LVEVVGEVGS-------VRDALVQI 456
+V + + P D ND+ +V+++G + +RD L Q+
Sbjct: 520 EVVVPRDQTP---DENDQVVVKIIGHFYASQMAQRKIRDILAQV 560
Score = 45.8 bits (107), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 10/97 (10%)
Query: 138 EKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLI 197
E+E Q+ +P+ IIGK G IK+L SIK+ P + P M V+I
Sbjct: 404 EQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPET--PDSKVRM-----VII 456
Query: 198 SGESEAVKKALFAISAIMYK---FSPREDIPLETTVR 231
+G EA KA I + + F P+E++ LET +R
Sbjct: 457 TGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIR 493
Score = 42.7 bits (99), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 24/148 (16%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDP-FPGAKDRVVTIYSHVKDK 93
E + ++ P +G++IGK G+ I + + A +K+ P P +K R+V I
Sbjct: 404 EQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVII------- 456
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
+A K I + K + K E I VP+S +
Sbjct: 457 ---------------TGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGR 501
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+IGK G T+ L++ T + V P+D +
Sbjct: 502 VIGKGGKTVNELQNLTAAEV-VVPRDQT 528
>gi|402592326|gb|EJW86255.1| hypothetical protein WUBG_02833 [Wuchereria bancrofti]
Length = 313
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 152/343 (44%), Gaps = 56/343 (16%)
Query: 289 YSTGLSLVSGLVGASQSEELV-----IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDV 343
YSTGL+ S + L +R+L G +IGK G ++K+I+ A + V
Sbjct: 16 YSTGLTAGKRQRQDSYQKALADGKYELRLLVTSRGAGAIIGKKGESVKNIQTECDATVSV 75
Query: 344 DDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCI 403
D++ + V V A+E+ VE ++ +++D D +++LV G +
Sbjct: 76 PDSQ-TPERVVQLVAAVEN----VVKCVEMIIARIDEVHDNQDRDSELKVLVHQSHAGAV 130
Query: 404 IGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDD 463
IG+ GS I E+R+ D+++ C + + ++++ G+ + LV II L++
Sbjct: 131 IGRGGSRIKELREENGVDLKVY---SECCPQSTERIIQINGKPEKIVACLVTIINTLKEI 187
Query: 464 ALKDRDGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSL 523
+K G Y S I P++ + Y A SG GM
Sbjct: 188 PIK----------GPSRPYES---IFFDPMVAN-------EYGGYAGDHSGRGMR----- 222
Query: 524 YGYGSLSMGDSPYGSMSSYSSKLYGGLPP-----PL-TLEVLVPANAVGKVIGKAGSNLA 577
GYG P G + YG +PP PL T +V VP G +IG+ G +
Sbjct: 223 -GYG-------PRGRI---PLPPYGSVPPAYDDGPLETAQVTVPNELGGTIIGRGGERIR 271
Query: 578 NIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAF 620
IR SGA I++ + + G+R+ ISGTP Q A+ L+Q +
Sbjct: 272 RIRDESGAHIKI-EEEDPNGERIITISGTPSQIEMAQFLLQQW 313
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 69/172 (40%), Gaps = 34/172 (19%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVD 99
R+L G++IGK G+ + +I+ E A V V P +RVV
Sbjct: 43 RLLVTSRGAGAIIGKKGESVKNIQTECDATVSV--PDSQTPERVVQ-------------- 86
Query: 100 DEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAG 159
L AA + ++K I + DN + E ++LV S + +IG+ G
Sbjct: 87 --------LVAAVENVVKCVEMIIARIDEVHDNQDR---DSELKVLVHQSHAGAVIGRGG 135
Query: 160 ATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAI 211
+ IK LR + +KV + C + + I+G+ E + L I
Sbjct: 136 SRIKELREENGVDLKVY-------SECCPQSTERIIQINGKPEKIVACLVTI 180
>gi|426243970|ref|XP_004015811.1| PREDICTED: RNA-binding protein Nova-2 [Ovis aries]
Length = 255
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 91/184 (49%), Gaps = 22/184 (11%)
Query: 299 LVGASQSE-ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD-----NRDE 352
L G+S E E ++VL P G +IGKGG TI +++ +GA I + +KD
Sbjct: 4 LPGSSAEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERV 63
Query: 353 CVITVTAIESPDDIKSMAVEAVL-------------LLQTKINDEDDDTVTIRLLVSSKV 399
C++ TA E+ + + S E V +LQ + D +L+V +
Sbjct: 64 CLVQGTA-EALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNST 122
Query: 400 IGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILR 459
G IIGK G+ + + +++ A V++S+ KP+ + + +V V GE V A+ I+ +
Sbjct: 123 AGLIIGKGGATVKAVMEQSGAWVQLSQ--KPEGINLQERVVTVSGEPEQVHKAVSAIVQK 180
Query: 460 LRDD 463
+++D
Sbjct: 181 VQED 184
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 85/181 (46%), Gaps = 17/181 (9%)
Query: 34 EESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV---DPFPGAKDRVVTIYSHV 90
E ++L P GS+IGK G+ I +++ET A +K+ D +PG +RV +
Sbjct: 11 EGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQG-- 68
Query: 91 KDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQ 150
E + F E + A+ K + N + T + R ++ +++VP+S
Sbjct: 69 -TAEALNAVHSF-IAEKVREIPQAMTKPE--VVNILQPQTTMNPDR--AKQAKLIVPNST 122
Query: 151 SANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFA 210
+ IIGK GAT+K + ++ ++++ K + V +SGE E V KA+ A
Sbjct: 123 AGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQ------ERVVTVSGEPEQVHKAVSA 176
Query: 211 I 211
I
Sbjct: 177 I 177
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 42/69 (60%), Gaps = 7/69 (10%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS---SRGDRVALISGTPEQKRA 612
L+VL+P+ A G +IGK G + ++K +GATI++S SK +RV L+ GT E
Sbjct: 16 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAE---- 71
Query: 613 AENLIQAFI 621
A N + +FI
Sbjct: 72 ALNAVHSFI 80
>gi|119577801|gb|EAW57397.1| neuro-oncological ventral antigen 2 [Homo sapiens]
Length = 556
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 86/175 (49%), Gaps = 21/175 (12%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD-----NRDECVITVTAIE 361
E ++VL P G +IGKGG TI +++ +GA I + +KD C++ TA E
Sbjct: 96 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTA-E 154
Query: 362 SPDDIKSMAVEAVL-------------LLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSG 408
+ + + S E V +LQ + D +L+V + G IIGK G
Sbjct: 155 ALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGG 214
Query: 409 SIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDD 463
+ + + +++ A V++S+ KP+ + + +V V GE V A+ I+ ++++D
Sbjct: 215 ATVKAVMEQSGAWVQLSQ--KPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQED 267
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 88/189 (46%), Gaps = 17/189 (8%)
Query: 26 NEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV---DPFPGAKDR 82
++ G E ++L P GS+IGK G+ I +++ET A +K+ D +PG +R
Sbjct: 86 TKRSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTER 145
Query: 83 VVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEEC 142
V + E + F E + A+ K + N + T + R ++
Sbjct: 146 VCLVQG---TAEALNAVHSF-IAEKVREIPQAMTKPE--VVNILQPQTTMNPDR--AKQA 197
Query: 143 QILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESE 202
+++VP+S + IIGK GAT+K + ++ ++++ K + V +SGE E
Sbjct: 198 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQ------ERVVTVSGEPE 251
Query: 203 AVKKALFAI 211
V KA+ AI
Sbjct: 252 QVHKAVSAI 260
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 42/69 (60%), Gaps = 7/69 (10%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS---SRGDRVALISGTPEQKRA 612
L+VL+P+ A G +IGK G + ++K +GATI++S SK +RV L+ GT E
Sbjct: 99 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAE---- 154
Query: 613 AENLIQAFI 621
A N + +FI
Sbjct: 155 ALNAVHSFI 163
Score = 42.0 bits (97), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 5/66 (7%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDS----KSSRGDRVALISGTPEQKR 611
+E+ VP N VG ++GK G L ++++GA I++S +R RV I+G+P +
Sbjct: 473 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVT-ITGSPAATQ 531
Query: 612 AAENLI 617
AA+ LI
Sbjct: 532 AAQYLI 537
>gi|431921619|gb|ELK18971.1| Poly(rC)-binding protein 2 [Pteropus alecto]
Length = 446
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 87/349 (24%), Positives = 156/349 (44%), Gaps = 52/349 (14%)
Query: 297 SGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVIT 356
+G++ + L IR+L + GK G ++K +R+ SGA+I++ + N E +IT
Sbjct: 3 TGVIEGGLNVTLTIRLL--------MHGKKGESVKKMREESGARINISE--GNCPERIIT 52
Query: 357 VTAIESPDD--IKSMAV------EAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSG 408
+ P + K+ A+ E + T VT+RL+V + G +IGK G
Sbjct: 53 LAG---PTNAIFKAFAMIIDKLEEDISSSMTNSTAASKPPVTLRLVVPASQCGSLIGKGG 109
Query: 409 SIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKD- 467
I EIR+ T A V+++ P ++ + + + G S+ + + QI + + + K
Sbjct: 110 CKIKEIRESTGAQVQVAGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLESPPKGV 166
Query: 468 ----RDGSRNPPV---GADHIYSSGT-GISMPPLLPSI--------PPVGPLGYDQRADS 511
R + PV G YS+G+ S P PS+ PP+ A +
Sbjct: 167 TIPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPL-------EAYT 219
Query: 512 GSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGL---PPPLTLEVLVPANAVGKV 568
G + L L+M S + M+ ++ GL + E+ +P + +G +
Sbjct: 220 IQGQYAIPQPDLTKLHQLAMQQSHF-PMTHGNTGFSAGLDASAQTTSHELTIPNDLIGCI 278
Query: 569 IGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLI 617
IG+ G+ + IR++SGA I++++ DR I+G+ A+ LI
Sbjct: 279 IGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLI 327
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 75/337 (22%), Positives = 136/337 (40%), Gaps = 75/337 (22%)
Query: 53 GKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQ 112
GK G+ + +R+E+ AR+ + + +R++T L
Sbjct: 22 GKKGESVKKMREESGARINISEG--NCPERIIT----------------------LAGPT 57
Query: 113 DALLKVHAAIANAV-----ANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRS 167
+A+ K A I + + ++ T++ K +++VP+SQ ++IGK G IK +R
Sbjct: 58 NAIFKAFAMIIDKLEEDISSSMTNSTAASKPPVTLRLVVPASQCGSLIGKGGCKIKEIRE 117
Query: 168 KTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLE 227
T ++V T + + I+G +++ + + I +M + P+
Sbjct: 118 STGAQVQVAGDMLPNST-------ERAITIAGIPQSIIECVKQICVVMLESPPK-----G 165
Query: 228 TTVREAPPSIIIPSDVPIYPPGGL-----------YPNADPIL--------PSRSVPSIL 268
T+ P PS P+ GG +P+ P + P +I
Sbjct: 166 VTIPYRPK----PSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQ 221
Query: 269 GAARVPD-----LQGYADTGNTWPVYSTGLSLVSGLVGASQ--SEELVIRVLCPFNKIGR 321
G +P L A + +P+ +GL ++Q S EL I P + IG
Sbjct: 222 GQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSAGLDASAQTTSHELTI----PNDLIGC 277
Query: 322 VIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
+IG+ G I IRQ SGAQI + + + + +T+T
Sbjct: 278 IIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTIT 314
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 34/52 (65%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTI 86
++ + + P+ +IG +IG+ G IN IRQ + A++K+ +P G+ DR VTI
Sbjct: 262 QTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTI 313
>gi|2673961|gb|AAB88661.1| astrocytic NOVA-like RNA-binding protein [Homo sapiens]
Length = 498
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 86/175 (49%), Gaps = 21/175 (12%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD-----NRDECVITVTAIE 361
E ++VL P G +IGKGG TI +++ +GA I + +KD C++ TA E
Sbjct: 38 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTA-E 96
Query: 362 SPDDIKSMAVEAVL-------------LLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSG 408
+ + + S E V +LQ + D +L+V + G IIGK G
Sbjct: 97 ALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGG 156
Query: 409 SIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDD 463
+ + + +++ A V++S+ KP+ + + +V V GE V A+ I+ ++++D
Sbjct: 157 ATVKAVMEQSGAWVQLSQ--KPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQED 209
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 90/189 (47%), Gaps = 17/189 (8%)
Query: 26 NEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV---DPFPGAKDR 82
++ G E ++L P GS+IGK G+ I +++ET A +K+ D +PG +R
Sbjct: 28 TKRSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTER 87
Query: 83 VVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEEC 142
V + E + F E + A+ K + N + T + R ++
Sbjct: 88 VCLVQG---TAEALNAVHSF-IAEKVREIPQAMTKPE--VVNILQPQTTMNPDR--AKQA 139
Query: 143 QILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESE 202
+++VP+S + IIGK GAT+K + ++ ++++ K ++ + V +SGE E
Sbjct: 140 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKP-----EGINLQ-ERVVTVSGEPE 193
Query: 203 AVKKALFAI 211
V KA+ AI
Sbjct: 194 QVHKAVSAI 202
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 42/69 (60%), Gaps = 7/69 (10%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSK---SSRGDRVALISGTPEQKRA 612
L+VL+P+ A G +IGK G + ++K +GATI++S SK +RV L+ GT E
Sbjct: 41 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAE---- 96
Query: 613 AENLIQAFI 621
A N + +FI
Sbjct: 97 ALNAVHSFI 105
Score = 42.0 bits (97), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 5/66 (7%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDS----KSSRGDRVALISGTPEQKR 611
+E+ VP N VG ++GK G L ++++GA I++S +R RV I+G+P +
Sbjct: 415 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVT-ITGSPAATQ 473
Query: 612 AAENLI 617
AA+ LI
Sbjct: 474 AAQYLI 479
>gi|27503479|gb|AAH42440.1| Pcbp3 protein [Mus musculus]
Length = 249
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 95/183 (51%), Gaps = 26/183 (14%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDD-- 365
L IR+L ++G +IGK G T+K +R+ SGA+I++ + N E ++T+T P D
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG---PTDAI 68
Query: 366 IKSMAVEAVLLLQTKINDEDDD------TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
K+ A+ A + IN + VT+RL+V + G +IGK GS I EIR+ T
Sbjct: 69 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 128
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGAD 479
A V+++ GD ++ + V + G DA++Q + ++ L+ +PP GA
Sbjct: 129 AQVQVA-GD--MLPNSTERAVTISG----TPDAIIQCVKQICVVMLE------SPPKGAT 175
Query: 480 HIY 482
Y
Sbjct: 176 IPY 178
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 109/262 (41%), Gaps = 50/262 (19%)
Query: 29 DEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYS 88
E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R+VTI
Sbjct: 6 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTI-- 61
Query: 89 HVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIA-----NAVANATDNDKKRKEKEECQ 143
DA+ K A IA + + + +++ K +
Sbjct: 62 --------------------TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLR 101
Query: 144 ILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEA 203
++VP+SQ ++IGK G+ IK +R T ++V T + V ISG +A
Sbjct: 102 LVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNST-------ERAVTISGTPDA 154
Query: 204 VKKALFAISAIMYKFSPR-EDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSR 262
+ + + I +M + P+ IP P+ P+ GG ADP+ S
Sbjct: 155 IIQCVKQICVVMLESPPKGATIPYRPK----------PASTPVIFAGGQV-RADPLAAST 203
Query: 263 SVPSILGAARVPDLQGYADTGN 284
+ S+L + P L Y G
Sbjct: 204 ANLSLL--LQHPPLPAYTIQGQ 223
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+TIRLL+ K +G IIGK G + ++R+ + A + IS+G+ P + +V + G
Sbjct: 13 TLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCP------ERIVTITGPTD 66
Query: 448 SVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
++ A I + +D ++ + + PPV
Sbjct: 67 AIFKAFAMIAYKFEEDIINSMSNSPATSKPPV 98
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Query: 552 PPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMS-DSKSSRGDRVALISGTPE 608
PP+TL ++VPA+ G +IGK GS + IR+ +GA ++++ D + +R ISGTP+
Sbjct: 96 PPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPD 153
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 40/66 (60%), Gaps = 3/66 (4%)
Query: 302 ASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDV-DDTKDNRDECVITVTAI 360
A+ + +R++ P ++ G +IGKGG IK IR+++GAQ+ V D N E +T++
Sbjct: 92 ATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISG- 150
Query: 361 ESPDDI 366
+PD I
Sbjct: 151 -TPDAI 155
>gi|335289843|ref|XP_003127279.2| PREDICTED: RNA-binding protein Nova-2 [Sus scrofa]
Length = 492
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 86/175 (49%), Gaps = 21/175 (12%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD-----NRDECVITVTAIE 361
E ++VL P G +IGKGG TI +++ +GA I + +KD C++ TA E
Sbjct: 32 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTA-E 90
Query: 362 SPDDIKSMAVEAVL-------------LLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSG 408
+ + + S E V +LQ + D +L+V + G IIGK G
Sbjct: 91 ALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGG 150
Query: 409 SIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDD 463
+ + + +++ A V++S+ KP+ + + +V V GE V A+ I+ ++++D
Sbjct: 151 ATVKAVMEQSGAWVQLSQ--KPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQED 203
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 88/189 (46%), Gaps = 17/189 (8%)
Query: 26 NEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV---DPFPGAKDR 82
++ G E ++L P GS+IGK G+ I +++ET A +K+ D +PG +R
Sbjct: 22 TKRSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTER 81
Query: 83 VVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEEC 142
V + E + F E + A+ K + N + T + R ++
Sbjct: 82 VCLVQG---TAEALNAVHSF-IAEKVREIPQAMTKPE--VVNILQPQTTMNPDR--AKQA 133
Query: 143 QILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESE 202
+++VP+S + IIGK GAT+K + ++ ++++ K + V +SGE E
Sbjct: 134 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQ------ERVVTVSGEPE 187
Query: 203 AVKKALFAI 211
V KA+ AI
Sbjct: 188 QVHKAVSAI 196
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 42/69 (60%), Gaps = 7/69 (10%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS---SRGDRVALISGTPEQKRA 612
L+VL+P+ A G +IGK G + ++K +GATI++S SK +RV L+ GT E
Sbjct: 35 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAE---- 90
Query: 613 AENLIQAFI 621
A N + +FI
Sbjct: 91 ALNAVHSFI 99
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 5/66 (7%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDS----KSSRGDRVALISGTPEQKR 611
+E+ VP N VG ++GK G L ++++GA I++S +R RV I+G+P +
Sbjct: 409 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVT-ITGSPAATQ 467
Query: 612 AAENLI 617
AA+ LI
Sbjct: 468 AAQYLI 473
>gi|348519759|ref|XP_003447397.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 2 [Oreochromis niloticus]
Length = 581
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 139/318 (43%), Gaps = 56/318 (17%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSM 369
+R+L P +G +IGK G TIK + + + +++D+ K+N +T +P+ S
Sbjct: 201 LRMLVPTQFVGAIIGKEGNTIKDVTKQTQSKVDI-HRKENAGAAEKPITIHSTPEGC-SA 258
Query: 370 AVEAVLLLQTKINDEDDDT--VTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKG 427
A +L + K +E T + +++L + ++G +IGK G + +I + T + IS
Sbjct: 259 ACRMILDIMQKEANETKTTEDIPLKILAHNSLVGRLIGKEGRNLKKIEEDTGTKITISSL 318
Query: 428 DKPKCADANDELVEVVGEVGSVRDALVQIILRLR-----DDALKDRDGSRNP--PVGADH 480
+ + + V G + + A V+I +LR D A ++ + P + A
Sbjct: 319 QDLTIYNP-ERTITVKGSIDACCKAEVEITKKLREAYENDIAAINQQANLIPGLNLNALG 377
Query: 481 IYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMS 540
I+SSG LP +PP G S
Sbjct: 378 IFSSG--------LPVLPPAA-----------------------------------GPRS 394
Query: 541 SYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS-SRGDR 599
+ + P + + +P AVG +IGK G ++ + +GA+I+++ ++S +R
Sbjct: 395 AVPAVAPQQAPEQEVVYLFIPTQAVGALIGKKGQHIKQLAHFAGASIKIAPAESPDVTER 454
Query: 600 VALISGTPEQKRAAENLI 617
+ +I+GTPE + A+ I
Sbjct: 455 MVIITGTPEAQFKAQGRI 472
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 100/462 (21%), Positives = 175/462 (37%), Gaps = 112/462 (24%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKEDVEV 98
R+L P +G++IGK G I + ++T+++V + GA ++ +TI+S
Sbjct: 202 RMLVPTQFVGAIIGKEGNTIKDVTKQTQSKVDIHRKENAGAAEKPITIHS---------- 251
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
E AA +L + A N+ K E +IL +S +IGK
Sbjct: 252 -----TPEGCSAACRMILDIMQKEA--------NETKTTEDIPLKILAHNSLVGRLIGKE 298
Query: 159 GATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKF 218
G +K++ T T I + S + + + G +A KA I+ +
Sbjct: 299 GRNLKKIEEDTGTKITI-----SSLQDLTIYNPERTITVKGSIDACCKAEVEITKKL--- 350
Query: 219 SPREDIPLETTVREAPPSIIIPSDVPIYPPG------GLYPNADPILPSRSVPSILGAAR 272
RE + ++I PG G++ + P+LP + P
Sbjct: 351 --REAYENDIAAINQQANLI---------PGLNLNALGIFSSGLPVLPPAAGPR------ 393
Query: 273 VPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKS 332
S V + E+ V+ + P +G +IGK G IK
Sbjct: 394 ---------------------SAVPAVAPQQAPEQEVVYLFIPTQAVGALIGKKGQHIKQ 432
Query: 333 IRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAV-----EAVLLLQTKI------ 381
+ +GA I + ESPD + M + EA Q +I
Sbjct: 433 LAHFAGASIK--------------IAPAESPDVTERMVIITGTPEAQFKAQGRIFGKLKE 478
Query: 382 ----NDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADAND 437
+ +++ + + V S G +IGK G +NE++ T A+V + + P D ND
Sbjct: 479 ENFFSAKEEVKLETHIKVPSSAAGRVIGKGGKTVNELQNLTSAEVIVPRDQTP---DEND 535
Query: 438 E-LVEVVGEVGSVRDA---LVQIILRLRDDALKDRDGSRNPP 475
E V++ G + + A + +II +++ K + G+ P
Sbjct: 536 EVFVKISGHFFASQTAQRKIREIIQQVKQQEQKHQQGAAVSP 577
Score = 45.8 bits (107), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 78/195 (40%), Gaps = 30/195 (15%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDP-FPGAKDRVVTIYS 88
++ E+ V+Y + P +G++IGK G+ I + A +K+ P +R+V I
Sbjct: 402 QQAPEQEVVY-LFIPTQAVGALIGKKGQHIKQLAHFAGASIKIAPAESPDVTERMVII-- 458
Query: 89 HVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPS 148
+A K I + K + K E I VPS
Sbjct: 459 --------------------TGTPEAQFKAQGRIFGKLKEENFFSAKEEVKLETHIKVPS 498
Query: 149 SQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKAL 208
S + +IGK G T+ L++ T + + P+D + + + FV ISG A + A
Sbjct: 499 SAAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPDEND-----EVFVKISGHFFASQTAQ 552
Query: 209 FAISAIMYKFSPRED 223
I I+ + +E
Sbjct: 553 RKIREIIQQVKQQEQ 567
>gi|223973385|gb|ACN30880.1| unknown [Zea mays]
Length = 254
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 113/253 (44%), Gaps = 25/253 (9%)
Query: 375 LLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCAD 434
LL + + +E + +RL+V + G IIGK G+ I + + A ++IS D
Sbjct: 20 LLAEGEEFNEAEARPKVRLVVPNSSCGGIIGKGGATIKSFIEESHAGIKISPQDN-NYVG 78
Query: 435 ANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSGTGISMPPLL 494
+D LV V G + +A+ I+ +L +D + S P A + S G+ + ++
Sbjct: 79 LHDRLVTVTGTFDNQMNAIDLILKKLSEDVHYPANLSSPFPY-AGLTFPSYPGVPVGYMI 137
Query: 495 PSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPL 554
P +P Y+ + G GYG + P M S +S
Sbjct: 138 PQVP------YNNAVNYGPN---------NGYGGRYQNNKPSTPMRSPASN-----EAQE 177
Query: 555 TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSK---SSRGDRVALISGTPEQKR 611
+L + + +G V+G+AG N+ I + SGA I++SD S DR I+GT E R
Sbjct: 178 SLTIGIADEHIGAVVGRAGRNITEIIQASGARIKISDRGDFISGTSDRKVTITGTSEAIR 237
Query: 612 AAENLIQAFIMAT 624
AE++I + A+
Sbjct: 238 TAESMIMQRVSAS 250
Score = 46.6 bits (109), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 87/212 (41%), Gaps = 29/212 (13%)
Query: 139 KEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLIS 198
+ + +++VP+S IIGK GATIK ++ IK++P+D ++ D V ++
Sbjct: 33 RPKVRLVVPNSSCGGIIGKGGATIKSFIEESHAGIKISPQD-----NNYVGLHDRLVTVT 87
Query: 199 GESEAVKKALFAISAIMYKFSPREDIPLETTVREAPP--SIIIPSDVPIYPPGGLYPNAD 256
G + AI I+ K S ED+ + P + PS P P G + P
Sbjct: 88 G---TFDNQMNAIDLILKKLS--EDVHYPANLSSPFPYAGLTFPS-YPGVPVGYMIPQVP 141
Query: 257 PILPSRSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPF 316
P+ R Y + + P+ S AS + + +
Sbjct: 142 YNNAVNYGPNNGYGGR------YQNNKPSTPMRSP----------ASNEAQESLTIGIAD 185
Query: 317 NKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD 348
IG V+G+ G I I QASGA+I + D D
Sbjct: 186 EHIGAVVGRAGRNITEIIQASGARIKISDRGD 217
>gi|255559157|ref|XP_002520600.1| conserved hypothetical protein [Ricinus communis]
gi|223540199|gb|EEF41773.1| conserved hypothetical protein [Ricinus communis]
Length = 161
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 74/138 (53%), Gaps = 15/138 (10%)
Query: 38 IYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVE 97
+YR++ P +GS+IG+ G++I + ETRAR++++D P DR+V I KE+ E
Sbjct: 28 VYRLIVPVAKVGSIIGRKGELIKQMCIETRARIRILDGPPSISDRIVLI----SGKEEPE 83
Query: 98 VDDEFNDKEPLCAAQDALLKVHAAIANAVA---NATDNDKKRKEKEECQILVPSSQSANI 154
L A DA+L+V ++ A +AT + ++LV SSQ+ N+
Sbjct: 84 A--------ALSPAIDAVLRVFKRVSGPSAGEGDATGSAVAGAAFSSVRLLVASSQAINL 135
Query: 155 IGKAGATIKRLRSKTRTS 172
IGK G+TIK + R +
Sbjct: 136 IGKQGSTIKSILESRRCA 153
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 61/119 (51%), Gaps = 13/119 (10%)
Query: 309 VIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKS 368
V R++ P K+G +IG+ G IK + + A+I + D + + ++ ++ E P+ S
Sbjct: 28 VYRLIVPVAKVGSIIGRKGELIKQMCIETRARIRILDGPPSISDRIVLISGKEEPEAALS 87
Query: 369 MAVEAVLLLQTKIN----DEDDDT---------VTIRLLVSSKVIGCIIGKSGSIINEI 414
A++AVL + +++ E D T ++RLLV+S +IGK GS I I
Sbjct: 88 PAIDAVLRVFKRVSGPSAGEGDATGSAVAGAAFSSVRLLVASSQAINLIGKQGSTIKSI 146
>gi|344270303|ref|XP_003406985.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
[Loxodonta africana]
Length = 492
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/327 (21%), Positives = 143/327 (43%), Gaps = 49/327 (14%)
Query: 298 GLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITV 357
G V + +L +R+L P +G +IGK G TI++I + + ++IDV K+N ++
Sbjct: 99 GSVSKQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHR-KENAGAAEKSI 157
Query: 358 TAIESPDDIKSMAVEAVLLLQTKIND-EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
T + +P+ + + ++ + D + + + +++L + +G +IGK G + +I +
Sbjct: 158 TILSTPEGTSAACKSILEIMHKEAQDIKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQ 217
Query: 417 RTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPV 476
T + IS + + + + V G V + A +I+ ++R+ D
Sbjct: 218 DTDTKITISPLQELTLYNP-ERTITVKGSVETCAKAEEEIMKKIRESYEND--------- 267
Query: 477 GADHIYSSGTGISMPP-----LLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSM 531
I S + P L PP GM +S G S
Sbjct: 268 ----IASMNLQAHLIPGLNLNALGLFPPTS--------------GMPPPTS----GPPSA 305
Query: 532 GDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSD 591
PY ++ T+ + +PA +VG +IGK G ++ + + +GA+I+++
Sbjct: 306 MTPPYPQFEQSETE---------TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAP 356
Query: 592 SKSSRGD-RVALISGTPEQKRAAENLI 617
+++ R+ +I+G PE + A+ I
Sbjct: 357 AEAPDAKVRMVIITGPPEAQFKAQGRI 383
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 95/441 (21%), Positives = 176/441 (39%), Gaps = 83/441 (18%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKEDVEV 98
R+L P +G++IGK G I +I ++T++++ V GA ++ +TI S
Sbjct: 112 RLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILS---------- 161
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
E AA ++L++ A D K E+ +IL ++ +IGK
Sbjct: 162 -----TPEGTSAACKSILEIMHKEAQ--------DIKFTEEIPLKILAHNNFVGRLIGKE 208
Query: 159 GATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKF 218
G +K++ T T I ++P + + + G E KA IM K
Sbjct: 209 GRNLKKIEQDTDTKITISPLQ-----ELTLYNPERTITVKGSVETCAKAE---EEIMKK- 259
Query: 219 SPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQG 278
+RE+ + I ++ + GL NA + P S
Sbjct: 260 -----------IRESYENDIASMNLQAHLIPGLNLNALGLFPPTS--------------- 293
Query: 279 YADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASG 338
G P ++ QSE + + P +G +IGK G IK + + +G
Sbjct: 294 ----GMPPPTSGPPSAMTPPYPQFEQSETETVHLFIPALSVGAIIGKQGQHIKQLSRFAG 349
Query: 339 AQIDV--DDTKDNRDECVITVTAIESPDDIKSMA---VEAVLLLQTKINDEDDDTVTIRL 393
A I + + D + VI I P + + A + + + ++ +++ + +
Sbjct: 350 ASIKIAPAEAPDAKVRMVI----ITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHI 405
Query: 394 LVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDE-LVEVVGEVGS---- 448
V S G +IGK G +NE++ + A+V + + P D ND+ +V++ G +
Sbjct: 406 RVPSFAAGRVIGKGGKTVNELQNLSSAEVVVPRDQTP---DENDQVVVKITGHFYACQVA 462
Query: 449 ---VRDALVQIILRLRDDALK 466
+++ L Q+ + AL+
Sbjct: 463 QRKIQEILTQVKQHQQQKALQ 483
>gi|4235140|gb|AAD13116.1| RNA-binding protein Nova-2 [AA 29-492] [Homo sapiens]
Length = 464
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 86/175 (49%), Gaps = 21/175 (12%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD-----NRDECVITVTAIE 361
E ++VL P G +IGKGG TI +++ +GA I + +KD C++ TA E
Sbjct: 4 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTA-E 62
Query: 362 SPDDIKSMAVEAVL-------------LLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSG 408
+ + + S E V +LQ + D +L+V + G IIGK G
Sbjct: 63 ALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGG 122
Query: 409 SIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDD 463
+ + + +++ A V++S+ KP+ + + +V V GE V A+ I+ ++++D
Sbjct: 123 ATVKAVMEQSGAWVQLSQ--KPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQED 175
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 85/181 (46%), Gaps = 17/181 (9%)
Query: 34 EESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV---DPFPGAKDRVVTIYSHV 90
E ++L P GS+IGK G+ I +++ET A +K+ D +PG +RV +
Sbjct: 2 EGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQG-- 59
Query: 91 KDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQ 150
E + F E + A+ K + N + T + R ++ +++VP+S
Sbjct: 60 -TAEALNAVHSF-IAEKVREIPQAMTKPE--VVNILQPQTTMNPDR--AKQAKLIVPNST 113
Query: 151 SANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFA 210
+ IIGK GAT+K + ++ ++++ K + V +SGE E V KA+ A
Sbjct: 114 AGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQ------ERVVTVSGEPEQVHKAVSA 167
Query: 211 I 211
I
Sbjct: 168 I 168
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 42/69 (60%), Gaps = 7/69 (10%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS---SRGDRVALISGTPEQKRA 612
L+VL+P+ A G +IGK G + ++K +GATI++S SK +RV L+ GT E
Sbjct: 7 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAE---- 62
Query: 613 AENLIQAFI 621
A N + +FI
Sbjct: 63 ALNAVHSFI 71
Score = 42.0 bits (97), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 5/66 (7%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDS----KSSRGDRVALISGTPEQKR 611
+E+ VP N VG ++GK G L ++++GA I++S +R RV I+G+P +
Sbjct: 381 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVT-ITGSPAATQ 439
Query: 612 AAENLI 617
AA+ LI
Sbjct: 440 AAQYLI 445
>gi|189238821|ref|XP_968538.2| PREDICTED: similar to heterogeneous nuclear ribonucleoprotein k
[Tribolium castaneum]
gi|270010156|gb|EFA06604.1| hypothetical protein TcasGA2_TC009519 [Tribolium castaneum]
Length = 414
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 91/180 (50%), Gaps = 12/180 (6%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSM 369
+R+L P G +IGKGG I +R A I V D E ++T+++ D I ++
Sbjct: 23 VRLLIPSKVAGSIIGKGGQNITKLRSQYKASITVPDCPG--PERMLTLSS--DLDTICNI 78
Query: 370 AVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDK 429
+ V L+ + + + +R+++ GC+IGK+G I E+R++T A ++I
Sbjct: 79 VTDVVPNLEENGGRVNGNELDLRMMIHQSQAGCVIGKAGYKIKELREKTGARIKIFSNVA 138
Query: 430 PKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNP--PVGADHIYSSGTG 487
P+ + D ++++VGE D++ +II ++ + +K G NP P D Y+ G
Sbjct: 139 PQ---STDRIIQIVGEPSKCVDSIREIITLIKSNPIK---GIVNPYDPHNYDDYYAEEYG 192
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 81/175 (46%), Gaps = 38/175 (21%)
Query: 27 EKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTI 86
++ +G+EE R+L P V GS+IGK G+ I +R + +A + V D PG +R++T+
Sbjct: 14 KRSRRGDEE---VRLLIPSKVAGSIIGKGGQNITKLRSQYKASITVPD-CPGP-ERMLTL 68
Query: 87 YSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKE-ECQIL 145
S D + +C + + V N +N + E + +++
Sbjct: 69 SS---------------DLDTICNI----------VTDVVPNLEENGGRVNGNELDLRMM 103
Query: 146 VPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGE 200
+ SQ+ +IGKAG IK LR KT IK+ A + T D + I GE
Sbjct: 104 IHQSQAGCVIGKAGYKIKELREKTGARIKIFSNVAPQST-------DRIIQIVGE 151
>gi|443712210|gb|ELU05631.1| hypothetical protein CAPTEDRAFT_229004 [Capitella teleta]
Length = 679
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 140/318 (44%), Gaps = 42/318 (13%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSM 369
+++L P + +G +IGKGG TI++I + +++DV K+N ++ +P++ S
Sbjct: 194 LKILVPSDFVGAIIGKGGETIRTITKKCNSRVDVHG-KENSGLLEKVISIYGNPENCTSA 252
Query: 370 AVEAVLLLQTKINDEDDDT-----VTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRI 424
E +L++Q +++ + + + +++L ++ G +IG+ G +I +IR+ T+ + +
Sbjct: 253 CKEILLVMQNELSSPNRTSSSVQEIVLKILADNRYCGRVIGREGRVIKKIREDTQTKITV 312
Query: 425 S------------KGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSR 472
S G + + + ++ V G++ + +A I LR+ A KD +
Sbjct: 313 SNDSDHLLELGHGHGLQDVASMFPERVISVRGDIDHMSEAEGAISTILRECAEKDMHQPQ 372
Query: 473 NPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMG 532
P ++MP + +P + G G G MG
Sbjct: 373 LDP----------RMMAMPGAMGGLPMMQGAGAGGIYPGGGPGFYPGMYPGVQQGHQDMG 422
Query: 533 DSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMS-- 590
P +S P T ++ VP +AVG +IG AGSN+ I + S A + +
Sbjct: 423 FPPSSGSNS----------PTETCQICVPNSAVGALIGAAGSNIKQIIRDSQAFVTIEPK 472
Query: 591 --DSKSSRGDRVALISGT 606
D + +R+ I GT
Sbjct: 473 KDDDPNPASERIVSIKGT 490
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 92/432 (21%), Positives = 179/432 (41%), Gaps = 59/432 (13%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKEDVEV 98
+IL P +G++IGK G+ I +I ++ +RV V G ++V++IY
Sbjct: 195 KILVPSDFVGAIIGKGGETIRTITKKCNSRVDVHGKENSGLLEKVISIYG---------- 244
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
N + A ++ LL + N +++ +E +IL + +IG+
Sbjct: 245 ----NPENCTSACKEILL----VMQNELSSPNRTSSSVQEI-VLKILADNRYCGRVIGRE 295
Query: 159 GATIKRLRSKTRTSIKVTPKDAS--EPTHS------CAMEFDNFVLISGESEAVKKALFA 210
G IK++R T+T I V+ E H +M + + + G+ + + +A A
Sbjct: 296 GRVIKKIREDTQTKITVSNDSDHLLELGHGHGLQDVASMFPERVISVRGDIDHMSEAEGA 355
Query: 211 ISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGA 270
IS I+ + + ++ + P + +P + P + A
Sbjct: 356 ISTILRECAEKDMHQPQLD----PRMMAMPGAMGGLP---MMQGAGAGGIYPGGGPGFYP 408
Query: 271 ARVPDL-QGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGT 329
P + QG+ D G +P S S S ++ P + +G +IG G
Sbjct: 409 GMYPGVQQGHQDMG--FPPSS-----------GSNSPTETCQICVPNSAVGALIGAAGSN 455
Query: 330 IKSIRQASGAQIDVDDTKDN----RDECVITVTAIESPDDIKSMAVEAVLLLQTK-INDE 384
IK I + S A + ++ KD+ E ++++ + D I + L+++ +
Sbjct: 456 IKQIIRDSQAFVTIEPKKDDDPNPASERIVSIKGTQ--DSIWRASYYVFEKLKSEGFSGN 513
Query: 385 DDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVG 444
DD + + V K +G +IGK G + E+++ T A +++ + + ++ +VE G
Sbjct: 514 DDVRLRTAIRVPQKAVGFVIGKGGKNVREVQRMTGAIIKLPED---QTVQGDEVVVEAYG 570
Query: 445 EVGSVRDALVQI 456
SV A +I
Sbjct: 571 TFMSVHSAHSRI 582
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 554 LTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALIS-GTPEQKRA 612
L + VP AVG VIGK G N+ +++++GA I++ + ++ +GD V + + GT +
Sbjct: 518 LRTAIRVPQKAVGFVIGKGGKNVREVQRMTGAIIKLPEDQTVQGDEVVVEAYGTFMSVHS 577
Query: 613 AENLIQAF 620
A + I+A
Sbjct: 578 AHSRIRAL 585
>gi|291415485|ref|XP_002723980.1| PREDICTED: neuro-oncological ventral antigen 2 [Oryctolagus
cuniculus]
Length = 492
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 86/175 (49%), Gaps = 21/175 (12%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD-----NRDECVITVTAIE 361
E ++VL P G +IGKGG TI +++ +GA I + +KD C++ TA E
Sbjct: 32 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTA-E 90
Query: 362 SPDDIKSMAVEAVL-------------LLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSG 408
+ + + S E V +LQ + D +L+V + G IIGK G
Sbjct: 91 ALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGG 150
Query: 409 SIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDD 463
+ + + +++ A V++S+ KP+ + + +V V GE V A+ I+ ++++D
Sbjct: 151 ATVKAVMEQSGAWVQLSQ--KPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQED 203
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 90/189 (47%), Gaps = 17/189 (8%)
Query: 26 NEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV---DPFPGAKDR 82
++ G E ++L P GS+IGK G+ I +++ET A +K+ D +PG +R
Sbjct: 22 TKRSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTER 81
Query: 83 VVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEEC 142
V + E + F E + A+ K + N + T + R ++
Sbjct: 82 VCLVQG---TAEALNAVHSF-IAEKVREIPQAMTKPE--VVNILQPQTTMNPDR--AKQA 133
Query: 143 QILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESE 202
+++VP+S + IIGK GAT+K + ++ ++++ K ++ + V +SGE E
Sbjct: 134 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKP-----EGINLQ-ERVVTVSGEPE 187
Query: 203 AVKKALFAI 211
V KA+ AI
Sbjct: 188 QVHKAVSAI 196
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 42/69 (60%), Gaps = 7/69 (10%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSK---SSRGDRVALISGTPEQKRA 612
L+VL+P+ A G +IGK G + ++K +GATI++S SK +RV L+ GT E
Sbjct: 35 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAE---- 90
Query: 613 AENLIQAFI 621
A N + +FI
Sbjct: 91 ALNAVHSFI 99
Score = 42.0 bits (97), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 5/66 (7%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDS----KSSRGDRVALISGTPEQKR 611
+E+ VP N VG ++GK G L ++++GA I++S +R RV I+G+P +
Sbjct: 409 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVT-ITGSPAATQ 467
Query: 612 AAENLI 617
AA+ LI
Sbjct: 468 AAQYLI 473
>gi|30354044|gb|AAH51679.1| Insulin-like growth factor 2 mRNA binding protein 1 [Mus musculus]
Length = 577
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 147/332 (44%), Gaps = 47/332 (14%)
Query: 292 GLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRD 351
G + +G Q ++ +R+L P +G +IGK G TI++I + + ++IDV K+N
Sbjct: 180 GSPVAAGAPAKQQPVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDV-HRKENAG 238
Query: 352 ECVITVTAIESPDDIKSMAVEAVLLLQTKIND-EDDDTVTIRLLVSSKVIGCIIGKSGSI 410
++ +P+ S + ++ + D + D V +++L + +G +IGK G
Sbjct: 239 AAEKAISVHSTPEGCSSACKMILEIMHKEAKDTKTADGVPLKILAHNNFVGRLIGKEGRN 298
Query: 411 INEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDG 470
+ ++ + T+ + IS + + + V G + + A +I+ ++R+ D
Sbjct: 299 LKKVEQDTETKITISSLQDLTLYNP-ERTITVKGAIENCCRAEQEIMKKVREAYEND--- 354
Query: 471 SRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLS 530
V A + S L+P + + G+ SSS++ S
Sbjct: 355 -----VAAMSLQSH--------LIPGL-----------NLAAVGLFPASSSAVPPPPSSV 390
Query: 531 MGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATI--- 587
G +PY S + P ++V +PA AVG +IGK G ++ + + + A+I
Sbjct: 391 TGAAPYSS--------FMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIA 442
Query: 588 --EMSDSKSSRGDRVALISGTPEQKRAAENLI 617
E DSK R+ +I+G PE + A+ I
Sbjct: 443 PPETPDSKV----RMVVITGPPEAQFKAQGRI 470
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 88/375 (23%), Positives = 157/375 (41%), Gaps = 74/375 (19%)
Query: 143 QILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKD---ASEP---THS--------CA 188
++LVP+ IIGK GATI+ + +T++ I V K+ A+E HS C
Sbjct: 199 RLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTPEGCSSACK 258
Query: 189 MEFDNFVLISGESEAVKKA------LFAISAIMYKFSPREDIPLETTVREAPPSIIIPS- 241
M + ++ E++ K A + A + + + +E L+ ++ I I S
Sbjct: 259 MILE---IMHKEAKDTKTADGVPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSL 315
Query: 242 -DVPIYPP-------GGL-----------------YPN--ADPILPSRSVPSILGAARVP 274
D+ +Y P G + Y N A L S +P L A V
Sbjct: 316 QDLTLYNPERTITVKGAIENCCRAEQEIMKKVREAYENDVAAMSLQSHLIPG-LNLAAVG 374
Query: 275 DLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIR 334
+ P TG + S + A + E +++V P +G +IGK G IK +
Sbjct: 375 LFPASSSAVPPPPSSVTGAAPYSSFMQAPEQE--MVQVFIPAQAVGAIIGKKGQHIKQLS 432
Query: 335 QASGAQIDVD--DTKDNRDECVITVTAIESPDDIKSMA---VEAVLLLQTKINDEDDDTV 389
+ + A I + +T D++ V+ I P + + A + L + +++ +
Sbjct: 433 RFASASIKIAPPETPDSKVRMVV----ITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKL 488
Query: 390 TIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDE-LVEVVGEVGS 448
+ V + G +IGK G +NE++ T A+V + + P D ND+ +V+++G +
Sbjct: 489 ETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQTP---DENDQVIVKIIGHFYA 545
Query: 449 -------VRDALVQI 456
+RD L Q+
Sbjct: 546 SQMAQRKIRDILAQV 560
Score = 45.4 bits (106), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 10/97 (10%)
Query: 138 EKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLI 197
E+E Q+ +P+ IIGK G IK+L SIK+ P + P M V+I
Sbjct: 404 EQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPET--PDSKVRM-----VVI 456
Query: 198 SGESEAVKKALFAISAIMYK---FSPREDIPLETTVR 231
+G EA KA I + + F P+E++ LET +R
Sbjct: 457 TGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIR 493
Score = 43.1 bits (100), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 24/148 (16%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDP-FPGAKDRVVTIYSHVKDK 93
E + ++ P +G++IGK G+ I + + A +K+ P P +K R+V I
Sbjct: 404 EQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVVI------- 456
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
+A K I + K + K E I VP+S +
Sbjct: 457 ---------------TGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGR 501
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+IGK G T+ L++ T + V P+D +
Sbjct: 502 VIGKGGKTVNELQNLTAAEV-VVPRDQT 528
>gi|26336871|dbj|BAC32119.1| unnamed protein product [Mus musculus]
Length = 577
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 147/332 (44%), Gaps = 47/332 (14%)
Query: 292 GLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRD 351
G + +G Q ++ +R+L P +G +IGK G TI++I + + ++IDV K+N
Sbjct: 180 GSPVAAGAPAKQQPVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDV-HRKENAG 238
Query: 352 ECVITVTAIESPDDIKSMAVEAVLLLQTKIND-EDDDTVTIRLLVSSKVIGCIIGKSGSI 410
++ +P+ S + ++ + D + D V +++L + +G +IGK G
Sbjct: 239 AAEKAISVHSTPEGCSSACKMILEIMHKEAKDTKTADEVPLKILAHNNFVGRLIGKEGRN 298
Query: 411 INEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDG 470
+ ++ + T+ + IS + + + V G + + A +I+ ++R+ D
Sbjct: 299 LKKVEQDTETKITISSLQDLTLYNP-ERTITVKGAIENCCRAEQEIMKKVREAYEND--- 354
Query: 471 SRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLS 530
V A + S L+P + + G+ SSS++ S
Sbjct: 355 -----VAAMSLQSH--------LIPGL-----------NLAAVGLFPASSSAVPPPPSSV 390
Query: 531 MGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATI--- 587
G +PY S + P ++V +PA AVG +IGK G ++ + + + A+I
Sbjct: 391 TGAAPYSS--------FMQAPEQGMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIA 442
Query: 588 --EMSDSKSSRGDRVALISGTPEQKRAAENLI 617
E DSK R+ +I+G PE + A+ I
Sbjct: 443 PPETPDSKV----RMVVITGPPEAQFKAQGRI 470
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 95/438 (21%), Positives = 175/438 (39%), Gaps = 97/438 (22%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKEDVEV 98
R+L P +G++IGK G I +I ++T++++ V GA ++ ++++S
Sbjct: 199 RLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHS---------- 248
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
E +A +L++ + D K ++ +IL ++ +IGK
Sbjct: 249 -----TPEGCSSACKMILEI--------MHKEAKDTKTADEVPLKILAHNNFVGRLIGKE 295
Query: 159 GATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESE-----AVKKALFAISA 213
G +K++ T T I ++ + L + E A++ A
Sbjct: 296 GRNLKKVEQDTETKITIS-------------SLQDLTLYNPERTITVKGAIENCCRAEQE 342
Query: 214 IMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPN--ADPILPSRSVPSILGAA 271
IM K VREA Y N A L S +P L A
Sbjct: 343 IMKK------------VREA------------------YENDVAAMSLQSHLIPG-LNLA 371
Query: 272 RVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIK 331
V + P TG + S + A E+ +++V P +G +IGK G IK
Sbjct: 372 AVGLFPASSSAVPPPPSSVTGAAPYSSFMQAP--EQGMVQVFIPAQAVGAIIGKKGQHIK 429
Query: 332 SIRQASGAQIDVD--DTKDNRDECVITVTAIESPDDIKSMA---VEAVLLLQTKINDEDD 386
+ + + A I + +T D++ V+ I P + + A + L + +++
Sbjct: 430 QLSRFASASIKIAPPETPDSKVRMVV----ITGPPEAQFKAQGRIYGKLKEENFFGPKEE 485
Query: 387 DTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDE-LVEVVGE 445
+ + V + G +IGK G +NE++ T A+V + + P D ND+ +V+++G
Sbjct: 486 VKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQTP---DENDQVIVKIIGH 542
Query: 446 VGS-------VRDALVQI 456
+ +RD L Q+
Sbjct: 543 FYASQMAQRKIRDILAQV 560
Score = 42.7 bits (99), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 24/148 (16%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDP-FPGAKDRVVTIYSHVKDK 93
E + ++ P +G++IGK G+ I + + A +K+ P P +K R+V I
Sbjct: 404 EQGMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVVI------- 456
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
+A K I + K + K E I VP+S +
Sbjct: 457 ---------------TGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGR 501
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+IGK G T+ L++ T + V P+D +
Sbjct: 502 VIGKGGKTVNELQNLTAAEV-VVPRDQT 528
>gi|383863653|ref|XP_003707294.1| PREDICTED: RNA-binding protein Nova-2-like isoform 1 [Megachile
rotundata]
Length = 514
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 91/169 (53%), Gaps = 18/169 (10%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD-----NRDECVITVTAIESPD 364
++VL P G +IGKGG TI +++ +GA++ + + D C+IT ++E+
Sbjct: 47 LKVLVPGVAAGAIIGKGGDTIAQLQKDTGAKVKISKSHDFYPGTTERVCLIT-GSLEAIM 105
Query: 365 DIKSMAVEAV-----LLLQTKINDEDDDTVT-----IRLLVSSKVIGCIIGKSGSIINEI 414
+ ++ + L L+T ++ E T +++LV + G IIGK+G+ I +I
Sbjct: 106 AVMDFIMDKIREKPDLTLKTTVDSESGKTTAERDKQVKILVPNSTAGMIIGKAGNYIKQI 165
Query: 415 RKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDD 463
++ + + V+IS+ K K + + V+GE + R+AL+ I+ ++ DD
Sbjct: 166 KEESGSYVQISQ--KAKDVSLQERCITVIGEKENNRNALMMILAKVADD 212
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 90/189 (47%), Gaps = 28/189 (14%)
Query: 32 GNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV---DPFPGAKDRVVTIYS 88
G + + ++L P G++IGK G I ++++T A+VK+ D +PG +RV I
Sbjct: 40 GGDGTYHLKVLVPGVAAGAIIGKGGDTIAQLQKDTGAKVKISKSHDFYPGTTERVCLITG 99
Query: 89 HVKDKEDVEVDDEFNDKEPLCAAQDALL-KVHAAIANAVANATDNDKKRKEKE---ECQI 144
+ E + A D ++ K+ + D++ + E + +I
Sbjct: 100 SL---------------EAIMAVMDFIMDKIREKPDLTLKTTVDSESGKTTAERDKQVKI 144
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAV 204
LVP+S + IIGKAG IK+++ ++ + +++ S+ +++ + + + GE E
Sbjct: 145 LVPNSTAGMIIGKAGNYIKQIKEESGSYVQI-----SQKAKDVSLQ-ERCITVIGEKENN 198
Query: 205 KKALFAISA 213
+ AL I A
Sbjct: 199 RNALMMILA 207
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS---SRGDRVALISGTPEQKRA 612
L+VLVP A G +IGK G +A ++K +GA +++S S +RV LI+G+ E A
Sbjct: 47 LKVLVPGVAAGAIIGKGGDTIAQLQKDTGAKVKISKSHDFYPGTTERVCLITGSLEAIMA 106
Query: 613 AENLI 617
+ I
Sbjct: 107 VMDFI 111
>gi|329663502|ref|NP_001193038.1| RNA-binding protein Nova-2 [Bos taurus]
Length = 492
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 86/175 (49%), Gaps = 21/175 (12%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD-----NRDECVITVTAIE 361
E ++VL P G +IGKGG TI +++ +GA I + +KD C++ TA E
Sbjct: 32 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTA-E 90
Query: 362 SPDDIKSMAVEAVL-------------LLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSG 408
+ + + S E V +LQ + D +L+V + G IIGK G
Sbjct: 91 ALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGG 150
Query: 409 SIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDD 463
+ + + +++ A V++S+ KP+ + + +V V GE V A+ I+ ++++D
Sbjct: 151 ATVKAVMEQSGAWVQLSQ--KPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQED 203
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 90/189 (47%), Gaps = 17/189 (8%)
Query: 26 NEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV---DPFPGAKDR 82
++ G E ++L P GS+IGK G+ I +++ET A +K+ D +PG +R
Sbjct: 22 TKRSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTER 81
Query: 83 VVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEEC 142
V + E + F E + A+ K + N + T + R ++
Sbjct: 82 VCLVQG---TAEALNAVHSF-IAEKVREIPQAMTKPE--VVNILQPQTTMNPDR--AKQA 133
Query: 143 QILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESE 202
+++VP+S + IIGK GAT+K + ++ ++++ K ++ + V +SGE E
Sbjct: 134 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKP-----EGINLQ-ERVVTVSGEPE 187
Query: 203 AVKKALFAI 211
V KA+ AI
Sbjct: 188 QVHKAVSAI 196
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 42/69 (60%), Gaps = 7/69 (10%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSK---SSRGDRVALISGTPEQKRA 612
L+VL+P+ A G +IGK G + ++K +GATI++S SK +RV L+ GT E
Sbjct: 35 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAE---- 90
Query: 613 AENLIQAFI 621
A N + +FI
Sbjct: 91 ALNAVHSFI 99
Score = 42.0 bits (97), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 5/66 (7%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDS----KSSRGDRVALISGTPEQKR 611
+E+ VP N VG ++GK G L ++++GA I++S +R RV I+G+P +
Sbjct: 409 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVT-ITGSPAATQ 467
Query: 612 AAENLI 617
AA+ LI
Sbjct: 468 AAQYLI 473
>gi|5902724|ref|NP_002507.1| RNA-binding protein Nova-2 [Homo sapiens]
gi|33516944|sp|Q9UNW9.1|NOVA2_HUMAN RecName: Full=RNA-binding protein Nova-2; AltName: Full=Astrocytic
NOVA1-like RNA-binding protein; AltName:
Full=Neuro-oncological ventral antigen 2
gi|3851553|gb|AAC72355.1| RNA-binding protein Nova-2 [Homo sapiens]
gi|195934809|gb|AAI68367.1| Neuro-oncological ventral antigen 2 [synthetic construct]
Length = 492
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 86/175 (49%), Gaps = 21/175 (12%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD-----NRDECVITVTAIE 361
E ++VL P G +IGKGG TI +++ +GA I + +KD C++ TA E
Sbjct: 32 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTA-E 90
Query: 362 SPDDIKSMAVEAVL-------------LLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSG 408
+ + + S E V +LQ + D +L+V + G IIGK G
Sbjct: 91 ALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGG 150
Query: 409 SIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDD 463
+ + + +++ A V++S+ KP+ + + +V V GE V A+ I+ ++++D
Sbjct: 151 ATVKAVMEQSGAWVQLSQ--KPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQED 203
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 90/189 (47%), Gaps = 17/189 (8%)
Query: 26 NEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV---DPFPGAKDR 82
++ G E ++L P GS+IGK G+ I +++ET A +K+ D +PG +R
Sbjct: 22 TKRSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTER 81
Query: 83 VVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEEC 142
V + E + F E + A+ K + N + T + R ++
Sbjct: 82 VCLVQG---TAEALNAVHSF-IAEKVREIPQAMTKPE--VVNILQPQTTMNPDR--AKQA 133
Query: 143 QILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESE 202
+++VP+S + IIGK GAT+K + ++ ++++ K ++ + V +SGE E
Sbjct: 134 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKP-----EGINLQ-ERVVTVSGEPE 187
Query: 203 AVKKALFAI 211
V KA+ AI
Sbjct: 188 QVHKAVSAI 196
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 42/69 (60%), Gaps = 7/69 (10%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSK---SSRGDRVALISGTPEQKRA 612
L+VL+P+ A G +IGK G + ++K +GATI++S SK +RV L+ GT E
Sbjct: 35 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAE---- 90
Query: 613 AENLIQAFI 621
A N + +FI
Sbjct: 91 ALNAVHSFI 99
Score = 42.0 bits (97), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 5/66 (7%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDS----KSSRGDRVALISGTPEQKR 611
+E+ VP N VG ++GK G L ++++GA I++S +R RV I+G+P +
Sbjct: 409 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVT-ITGSPAATQ 467
Query: 612 AAENLI 617
AA+ LI
Sbjct: 468 AAQYLI 473
>gi|194225936|ref|XP_001499355.2| PREDICTED: far upstream element-binding protein 3 [Equus caballus]
Length = 573
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 135/340 (39%), Gaps = 40/340 (11%)
Query: 315 PFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDE--CVITVT--AIESPDDIKSMA 370
P +G +IG+GG I I+ SG +I + E CV+T T +IE +
Sbjct: 86 PDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPESIEQAKRLLGQI 145
Query: 371 VEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKAD-VRISKGDK 429
V+ ND D + LL+ + +G +IGK G I ++++RT V I G
Sbjct: 146 VDRCRNGPGFHNDVDGSSTIQELLIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPL 205
Query: 430 PKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSS----- 484
P AD + +V R+ +++II + G + +G + S
Sbjct: 206 PTGADKPLRITGDPFKVQQAREMVLEIIREKDQADFRGVRGDFSSRMGGGSLEVSVPRFA 265
Query: 485 -------------------GTGISMPP---LLP--SIPPVGPLGYDQRADSGSGIGMLSS 520
G I P + P + +GP Q A +L++
Sbjct: 266 VGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPERAAQVMGPPDRCQHAAHVINELILTA 325
Query: 521 SSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIR 580
G+G L++ +S GG+ + VPA+ G VIGK G N+ +I
Sbjct: 326 QERDGFGGLAVARGRGRGRGDWSVGTPGGV---QEITYTVPADKCGLVIGKGGENIKSIN 382
Query: 581 KISGATIEMSDSKSSRGD---RVALISGTPEQKRAAENLI 617
+ SGA +E+ + D R+ I G P+Q A +LI
Sbjct: 383 QQSGAHVELQRNPPPNTDPNLRIFTIRGIPQQIEVARHLI 422
Score = 42.7 bits (99), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 537 GSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSR 596
G +SS++ GG +LEV VP AVG VIG+ G + I+ +G I+
Sbjct: 243 GVRGDFSSRMGGG-----SLEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGIS 297
Query: 597 GDRVALISGTPEQKRAAENLIQAFIM 622
+R A + G P++ + A ++I I+
Sbjct: 298 PERAAQVMGPPDRCQHAAHVINELIL 323
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%)
Query: 554 LTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAA 613
+T E VP VG +IG+ G ++ I+ SG I+++ S +R +++GTPE A
Sbjct: 79 ITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPESIEQA 138
Query: 614 ENLI 617
+ L+
Sbjct: 139 KRLL 142
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 75/164 (45%), Gaps = 24/164 (14%)
Query: 44 PDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFN 103
PD ++G +IG+ G+ I+ I+ E+ ++++ G +R + E +E
Sbjct: 86 PDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVL---TGTPESIE------ 136
Query: 104 DKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIK 163
A+ L ++ N D D +E +L+P+S+ +IGK G TIK
Sbjct: 137 ------QAKRLLGQIVDRCRNGPGFHNDVDGSSTIQE---LLIPASKVGLVIGKGGETIK 187
Query: 164 RLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKA 207
+L+ +T + V +D PT + D + I+G+ V++A
Sbjct: 188 QLQERTGVKM-VMIQDGPLPTGA-----DKPLRITGDPFKVQQA 225
>gi|148691147|gb|EDL23094.1| neuro-oncological ventral antigen 2 [Mus musculus]
Length = 411
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 86/175 (49%), Gaps = 21/175 (12%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD-----NRDECVITVTAIE 361
E ++VL P G +IGKGG TI +++ +GA I + +KD C++ TA E
Sbjct: 3 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTA-E 61
Query: 362 SPDDIKSMAVEAVL-------------LLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSG 408
+ + + S E V +LQ + D +L+V + G IIGK G
Sbjct: 62 ALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGG 121
Query: 409 SIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDD 463
+ + + +++ A V++S+ KP+ + + +V V GE V A+ I+ ++++D
Sbjct: 122 ATVKAVMEQSGAWVQLSQ--KPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQED 174
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 85/181 (46%), Gaps = 17/181 (9%)
Query: 34 EESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV---DPFPGAKDRVVTIYSHV 90
E ++L P GS+IGK G+ I +++ET A +K+ D +PG +RV +
Sbjct: 1 EGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQG-- 58
Query: 91 KDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQ 150
E + F E + A+ K + N + T + R ++ +++VP+S
Sbjct: 59 -TAEALNAVHSF-IAEKVREIPQAMTKPE--VVNILQPQTTMNPDR--AKQAKLIVPNST 112
Query: 151 SANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFA 210
+ IIGK GAT+K + ++ ++++ K + V +SGE E V KA+ A
Sbjct: 113 AGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQ------ERVVTVSGEPEQVHKAVSA 166
Query: 211 I 211
I
Sbjct: 167 I 167
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 42/69 (60%), Gaps = 7/69 (10%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS---SRGDRVALISGTPEQKRA 612
L+VL+P+ A G +IGK G + ++K +GATI++S SK +RV L+ GT E
Sbjct: 6 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAE---- 61
Query: 613 AENLIQAFI 621
A N + +FI
Sbjct: 62 ALNAVHSFI 70
>gi|291219869|ref|NP_001025048.2| neuro-oncological ventral antigen 2 [Mus musculus]
Length = 492
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 86/175 (49%), Gaps = 21/175 (12%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD-----NRDECVITVTAIE 361
E ++VL P G +IGKGG TI +++ +GA I + +KD C++ TA E
Sbjct: 32 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTA-E 90
Query: 362 SPDDIKSMAVEAVL-------------LLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSG 408
+ + + S E V +LQ + D +L+V + G IIGK G
Sbjct: 91 ALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGG 150
Query: 409 SIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDD 463
+ + + +++ A V++S+ KP+ + + +V V GE V A+ I+ ++++D
Sbjct: 151 ATVKAVMEQSGAWVQLSQ--KPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQED 203
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 90/189 (47%), Gaps = 17/189 (8%)
Query: 26 NEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV---DPFPGAKDR 82
++ G E ++L P GS+IGK G+ I +++ET A +K+ D +PG +R
Sbjct: 22 TKRSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTER 81
Query: 83 VVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEEC 142
V + E + F E + A+ K + N + T + R ++
Sbjct: 82 VCLVQG---TAEALNAVHSF-IAEKVREIPQAMTKPE--VVNILQPQTTMNPDR--AKQA 133
Query: 143 QILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESE 202
+++VP+S + IIGK GAT+K + ++ ++++ K ++ + V +SGE E
Sbjct: 134 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKP-----EGINLQ-ERVVTVSGEPE 187
Query: 203 AVKKALFAI 211
V KA+ AI
Sbjct: 188 QVHKAVSAI 196
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 42/69 (60%), Gaps = 7/69 (10%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS---SRGDRVALISGTPEQKRA 612
L+VL+P+ A G +IGK G + ++K +GATI++S SK +RV L+ GT E
Sbjct: 35 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAE---- 90
Query: 613 AENLIQAFI 621
A N + +FI
Sbjct: 91 ALNAVHSFI 99
Score = 42.0 bits (97), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 5/66 (7%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDS----KSSRGDRVALISGTPEQKR 611
+E+ VP N VG ++GK G L ++++GA I++S +R RV I+G+P +
Sbjct: 409 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVT-ITGSPAATQ 467
Query: 612 AAENLI 617
AA+ LI
Sbjct: 468 AAQYLI 473
>gi|348537887|ref|XP_003456424.1| PREDICTED: RNA-binding protein Nova-1-like isoform 1 [Oreochromis
niloticus]
Length = 496
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 85/174 (48%), Gaps = 19/174 (10%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD-----NRDECVI--TVTA 359
E ++VL P G +IGKGG TI +++ +GA I + +KD C+I TV A
Sbjct: 56 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEA 115
Query: 360 IESPDDI----------KSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGS 409
+ D + E V +LQ + D +L+V + G IIGK G+
Sbjct: 116 LNGVHDFIAEKVREMPQSTQKTEPVSILQPQTTVNPDRVKQAKLIVPNSTAGLIIGKGGA 175
Query: 410 IINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDD 463
+ + +++ A V++S+ KP+ + + +V + GE R A+ I+ ++++D
Sbjct: 176 TVKAVMEQSGAWVQLSQ--KPEGINLQERVVTISGEPEQNRKAVEIIVQKIQED 227
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 86/194 (44%), Gaps = 35/194 (18%)
Query: 27 EKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV---DPFPGAKDRV 83
++ G E ++L P GS+IGK G+ I +++ET A +K+ D +PG +RV
Sbjct: 47 KRTNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERV 106
Query: 84 VTIYSHVKDKEDV---------EVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDK 134
I V+ V E+ EP+ Q T N
Sbjct: 107 CLIQGTVEALNGVHDFIAEKVREMPQSTQKTEPVSILQP--------------QTTVNPD 152
Query: 135 KRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNF 194
+ K + +++VP+S + IIGK GAT+K + ++ ++++ K ++ +
Sbjct: 153 RVK---QAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKP-----EGINLQ-ERV 203
Query: 195 VLISGESEAVKKAL 208
V ISGE E +KA+
Sbjct: 204 VTISGEPEQNRKAV 217
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS---SRGDRVALISGTPEQKRA 612
L+VL+P+ A G +IGK G + ++K +GATI++S SK +RV LI GT E
Sbjct: 59 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNG 118
Query: 613 AENLI 617
+ I
Sbjct: 119 VHDFI 123
>gi|340726176|ref|XP_003401437.1| PREDICTED: poly(rC)-binding protein 3-like [Bombus terrestris]
Length = 466
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 92/380 (24%), Positives = 155/380 (40%), Gaps = 65/380 (17%)
Query: 36 SVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKED 95
++ R++ +GS+IGK G+++ R+E+ A++ + D +R+VT+
Sbjct: 17 TLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDG--SCPERIVTVTGPTNS--- 71
Query: 96 VEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANII 155
+ A + K + + + + +++VP+SQ ++I
Sbjct: 72 ------------IFKAFTLICKKFEEWCSQFHDIQGSGGVPRPPITLRLIVPASQCGSLI 119
Query: 156 GKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIM 215
GK G+ IK +R T SI+V T + V ISG SEA+ + ++ I +M
Sbjct: 120 GKGGSKIKEIREVTGASIQVASDMLPNST-------ERAVTISGTSEAITQCIYHICCVM 172
Query: 216 YKFSPR-EDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVP 274
+ P+ IP + P I+ Y G Y +P+ S LG+ +
Sbjct: 173 LESPPKGATIPYRPKPQVGGPVILAGGQA--YTIQGNY-----AVPAHSDMGKLGSNPLA 225
Query: 275 DLQGYADTGNTWPVYSTGLSLVSGL-----------------VGASQSEELVIRVLCPFN 317
L G P + GL+ + G +Q+ E+ + P
Sbjct: 226 GLAALGLGGLATPANTGGLNPAALAALAGSQLRTSNTNRQQPAGNNQTHEMTV----PNE 281
Query: 318 KIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECV-ITVTAIESPDDIK------SMA 370
IG +IGKGG I IRQ SGA I + + ++ T+T +PD + SM+
Sbjct: 282 LIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGATDRTITITGNPDAVALAQYLISMS 341
Query: 371 VEAVLLLQTKINDEDDDTVT 390
VE LQ K N E +T T
Sbjct: 342 VE----LQ-KANLEAQNTQT 356
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 44/63 (69%), Gaps = 2/63 (3%)
Query: 548 GGLP-PPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEM-SDSKSSRGDRVALISG 605
GG+P PP+TL ++VPA+ G +IGK GS + IR+++GA+I++ SD + +R ISG
Sbjct: 97 GGVPRPPITLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASDMLPNSTERAVTISG 156
Query: 606 TPE 608
T E
Sbjct: 157 TSE 159
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 11/101 (10%)
Query: 381 INDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELV 440
+ND+ T+TIRL++ K +G IIGK G I+ R+ + A + IS G P + +V
Sbjct: 10 LNDDPSVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCP------ERIV 63
Query: 441 EVVGEVGSVRDALVQIILRLRDDALKDRD-----GSRNPPV 476
V G S+ A I + + + D G PP+
Sbjct: 64 TVTGPTNSIFKAFTLICKKFEEWCSQFHDIQGSGGVPRPPI 104
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 555 TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRG---DRVALISGTPEQKR 611
T E+ VP +G +IGK G+ +A IR+ISGA I +S+ + G DR I+G P+
Sbjct: 273 THEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGATDRTITITGNPDAVA 332
Query: 612 AAENLI 617
A+ LI
Sbjct: 333 LAQYLI 338
>gi|351695446|gb|EHA98364.1| Far upstream element-binding protein 3 [Heterocephalus glaber]
Length = 490
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 138/341 (40%), Gaps = 42/341 (12%)
Query: 315 PFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDE--CVITVT--AIESPDDIKSMA 370
P +G +IG+GG I I+ SG +I + E CV+T T +IE +
Sbjct: 72 PDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPESIEQAKRLLGQI 131
Query: 371 VEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKAD-VRISKGDK 429
V+ ND D + +L+ + +G +IGK G I ++++RT V I G
Sbjct: 132 VDRCRNGPGFHNDVDGNNTIQEILIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPL 191
Query: 430 PKCADANDELVEVVGEVGSVRDALVQIILRLRDDA-LKDRDGSRNPPVGADHIYSS---- 484
P AD + +V R+ +++II R +D A + G + +G I S
Sbjct: 192 PTGADKPLRITGDPFKVQQAREMVLEII-REKDQADFRGVRGDFSSRLGGGSIEVSVPRF 250
Query: 485 --------------------GTGISMPPLLPSIPP-----VGPLGYDQRADSGSGIGMLS 519
G I P P +GP Q A +L+
Sbjct: 251 AVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGVSPERAAQVMGPPDRCQHAAHIINELILT 310
Query: 520 SSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANI 579
+ G+G L++ S ++ GG+ + VPA+ G VIGK G N+ +I
Sbjct: 311 AQERDGFGGLAVARGRGRSRGDWNMGTAGGV---QEITYTVPADKCGLVIGKGGENIKSI 367
Query: 580 RKISGATIEMSDSKSSRGD---RVALISGTPEQKRAAENLI 617
+ SGA +E+ + D R+ I G P+Q A +LI
Sbjct: 368 NQQSGAHVELQRNPPPNTDPSLRIFTIRGVPQQIEVARHLI 408
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 537 GSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSR 596
G +SS+L GG ++EV VP AVG VIG+ G + I+ +G I+
Sbjct: 229 GVRGDFSSRLGGG-----SIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGVS 283
Query: 597 GDRVALISGTPEQKRAAENLIQAFIM 622
+R A + G P++ + A ++I I+
Sbjct: 284 PERAAQVMGPPDRCQHAAHIINELIL 309
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 75/164 (45%), Gaps = 24/164 (14%)
Query: 44 PDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFN 103
PD ++G +IG+ G+ I+ I+ E+ ++++ G +R + E +E
Sbjct: 72 PDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTG---TPESIE------ 122
Query: 104 DKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIK 163
A+ L ++ N D D +E IL+P+S+ +IGK G TIK
Sbjct: 123 ------QAKRLLGQIVDRCRNGPGFHNDVDGNNTIQE---ILIPASKVGLVIGKGGETIK 173
Query: 164 RLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKA 207
+L+ +T + V +D PT + D + I+G+ V++A
Sbjct: 174 QLQERTGVKM-VMIQDGPLPTGA-----DKPLRITGDPFKVQQA 211
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%)
Query: 554 LTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAA 613
+T E VP VG +IG+ G ++ I+ SG I+++ S +R +++GTPE A
Sbjct: 65 ITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPESIEQA 124
Query: 614 ENLI 617
+ L+
Sbjct: 125 KRLL 128
>gi|62858479|ref|NP_001017139.1| insulin-like growth factor 2 mRNA binding protein 3 [Xenopus
(Silurana) tropicalis]
gi|89272857|emb|CAJ82142.1| IGF-II mRNA-binding protein 3 (imp-3) [Xenopus (Silurana)
tropicalis]
Length = 594
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/313 (21%), Positives = 142/313 (45%), Gaps = 36/313 (11%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
E+ +R+L P +G +IGK G TI++I + + ++ID+ K+N +T +P+
Sbjct: 205 EVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHR-KENAGAAEKPITIHSTPEGC 263
Query: 367 KSMAVEAVLLLQTKINDED-DDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRIS 425
+ + ++Q + D + + +++L + +G +IGK G + +I + T + IS
Sbjct: 264 SAACKIIMEIMQKEAQDTKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITIS 323
Query: 426 KGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSG 485
+ + + V G + + A +I+ ++R+ D + A ++ +
Sbjct: 324 PLQDLTLYNP-ERTITVKGSIEACAKAEEEIMKKIRESYEND--------IAAMNLQAH- 373
Query: 486 TGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSK 545
L+P + + + +G+ SS S +S S
Sbjct: 374 -------LIPGL-------------NLNALGLFPPSSSGMPPPSVGVPS---PTTSTSYP 410
Query: 546 LYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGD-RVALIS 604
+G P T+ + +PA AVG +IGK G ++ + + +GA+I+++ ++ R+ +I+
Sbjct: 411 PFGQQPESETVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKLRMVIIT 470
Query: 605 GTPEQKRAAENLI 617
G PE + A+ I
Sbjct: 471 GPPEAQFKAQGRI 483
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 94/414 (22%), Positives = 169/414 (40%), Gaps = 74/414 (17%)
Query: 34 EESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKD 92
+ V R+L P +G++IGK G I +I ++T++++ + GA ++ +TI+S
Sbjct: 203 QSEVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAEKPITIHS---- 258
Query: 93 KEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSA 152
E AA ++++ A D K E+ +IL ++
Sbjct: 259 -----------TPEGCSAACKIIMEIMQKEA--------QDTKFTEEIPLKILAHNNFVG 299
Query: 153 NIIGKAGATIKRLRSKTRTSIKVTP-KDASEPTHSCAMEFDNFVLISGESEAVKKALFAI 211
+IGK G +K++ T T I ++P +D + + + + G EA KA
Sbjct: 300 RLIGKEGRNLKKIEQDTDTKITISPLQDLT------LYNPERTITVKGSIEACAKAE--- 350
Query: 212 SAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAA 271
IM K +RE+ + I ++ + GL NA + P S +
Sbjct: 351 EEIMKK------------IRESYENDIAAMNLQAHLIPGLNLNALGLFPPSSSGMPPPSV 398
Query: 272 RVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIK 331
VP T ++P + Q E + + P +G +IGK G IK
Sbjct: 399 GVPS----PTTSTSYPPF------------GQQPESETVHLFIPALAVGAIIGKQGQHIK 442
Query: 332 SIRQASGAQIDVDDTK--DNRDECVITVTAIESPDDIKSMA---VEAVLLLQTKINDEDD 386
+ + +GA I + + D + VI I P + + A + L + +++
Sbjct: 443 QLSRFAGASIKIAPAEGPDAKLRMVI----ITGPPEAQFKAQGRIYGKLKEENFFGPKEE 498
Query: 387 DTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELV 440
+ + V S G +IGK G +NE++ T A+V + + P D ND++V
Sbjct: 499 VKLEAHIKVPSYAAGRVIGKGGKTVNELQNLTSAEVVVPRDQTP---DENDQVV 549
>gi|395854336|ref|XP_003799652.1| PREDICTED: RNA-binding protein Nova-2, partial [Otolemur garnettii]
Length = 487
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 86/175 (49%), Gaps = 21/175 (12%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD-----NRDECVITVTAIE 361
E ++VL P G +IGKGG TI +++ +GA I + +KD C++ TA E
Sbjct: 27 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTA-E 85
Query: 362 SPDDIKSMAVEAVL-------------LLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSG 408
+ + + S E V +LQ + D +L+V + G IIGK G
Sbjct: 86 ALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGG 145
Query: 409 SIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDD 463
+ + + +++ A V++S+ KP+ + + +V V GE V A+ I+ ++++D
Sbjct: 146 ATVKAVMEQSGAWVQLSQ--KPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQED 198
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 90/189 (47%), Gaps = 17/189 (8%)
Query: 26 NEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV---DPFPGAKDR 82
++ G E ++L P GS+IGK G+ I +++ET A +K+ D +PG +R
Sbjct: 17 TKRSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTER 76
Query: 83 VVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEEC 142
V + E + F E + A+ K + N + T + R ++
Sbjct: 77 VCLVQG---TAEALNAVHSF-IAEKVREIPQAMTKPE--VVNILQPQTTMNPDR--AKQA 128
Query: 143 QILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESE 202
+++VP+S + IIGK GAT+K + ++ ++++ K ++ + V +SGE E
Sbjct: 129 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKP-----EGINLQ-ERVVTVSGEPE 182
Query: 203 AVKKALFAI 211
V KA+ AI
Sbjct: 183 QVHKAVSAI 191
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 42/69 (60%), Gaps = 7/69 (10%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS---SRGDRVALISGTPEQKRA 612
L+VL+P+ A G +IGK G + ++K +GATI++S SK +RV L+ GT E
Sbjct: 30 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAE---- 85
Query: 613 AENLIQAFI 621
A N + +FI
Sbjct: 86 ALNAVHSFI 94
Score = 42.0 bits (97), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 5/66 (7%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDS----KSSRGDRVALISGTPEQKR 611
+E+ VP N VG ++GK G L ++++GA I++S +R RV I+G+P +
Sbjct: 404 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVT-ITGSPAATQ 462
Query: 612 AAENLI 617
AA+ LI
Sbjct: 463 AAQYLI 468
>gi|338723967|ref|XP_001497902.3| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
[Equus caballus]
Length = 638
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/334 (20%), Positives = 145/334 (43%), Gaps = 80/334 (23%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
+L +R+L P +G +IGK G TI++I + + ++IDV K+N ++T + +P+
Sbjct: 253 DLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHR-KENAGAAEKSITILSTPEGT 311
Query: 367 KSMAVEAVLLLQTKIND-EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRIS 425
+ + ++ + D + + + +++L + +G +IGK G + +I + T + IS
Sbjct: 312 SAACKSILEIMHKEAQDIKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITIS 371
Query: 426 ----------------KGDKPKCADANDELVEVVGE-----VGSVRDALVQIILRLRDDA 464
KG+ CA A +E+++ + E + S+ + +I L +A
Sbjct: 372 PLQELTLYNPERTITIKGNVETCAKAEEEIMKKIRESYENDIASM-NLQAHLIPGLNLNA 430
Query: 465 LKDRDGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLY 524
L PP +SG +M P P ++Q++++ +
Sbjct: 431 L-----GLFPPTSGMPPPTSGPPSAMTPPYPQ--------FEQQSETET----------- 466
Query: 525 GYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISG 584
+ + +PA +VG +IGK G ++ + + +G
Sbjct: 467 -------------------------------VHLFIPALSVGAIIGKQGQHIKQLSRFAG 495
Query: 585 ATIEMSDSKSSRGD-RVALISGTPEQKRAAENLI 617
A+I+++ +++ R+ +I+G PE + A+ I
Sbjct: 496 ASIKIAPAEAPDAKVRMVIITGPPEAQFKAQGRI 529
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 98/448 (21%), Positives = 181/448 (40%), Gaps = 96/448 (21%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKEDVEV 98
R+L P +G++IGK G I +I ++T++++ V GA ++ +TI S
Sbjct: 257 RLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILS---------- 306
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
E AA ++L++ + D K E+ +IL ++ +IGK
Sbjct: 307 -----TPEGTSAACKSILEI--------MHKEAQDIKFTEEIPLKILAHNNFVGRLIGKE 353
Query: 159 GATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKF 218
G +K++ T T I ++P + + I G E KA IM K
Sbjct: 354 GRNLKKIEQDTDTKITISPLQ-----ELTLYNPERTITIKGNVETCAKAE---EEIMKK- 404
Query: 219 SPREDIPLETTVREAPPSIIIPSDVPIYP-PG------GLYPNADPILPSRSVPSILGAA 271
+RE+ + I ++ + PG GL+P + P S P +A
Sbjct: 405 -----------IRESYENDIASMNLQAHLIPGLNLNALGLFPPTSGMPPPTSGPP---SA 450
Query: 272 RVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIK 331
P +P + QSE + + P +G +IGK G IK
Sbjct: 451 MTPP----------YPQFE------------QQSETETVHLFIPALSVGAIIGKQGQHIK 488
Query: 332 SIRQASGAQIDV--DDTKDNRDECVITVTAIESPDDIKSMA---VEAVLLLQTKINDEDD 386
+ + +GA I + + D + VI I P + + A + + + ++ +++
Sbjct: 489 QLSRFAGASIKIAPAEAPDAKVRMVI----ITGPPEAQFKAQGRIYGKIKEENFVSPKEE 544
Query: 387 DTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDE-LVEVVGE 445
+ + V S G +IGK G +NE++ + A+V + + P D ND+ +V++ G
Sbjct: 545 VKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEVVVPRDQTP---DENDQVVVKITGH 601
Query: 446 VGS-------VRDALVQIILRLRDDALK 466
+ +++ L Q+ + AL+
Sbjct: 602 FYACQVAQRKIQEILTQVKQHQQQKALQ 629
>gi|398397391|ref|XP_003852153.1| hypothetical protein MYCGRDRAFT_109444 [Zymoseptoria tritici
IPO323]
gi|339472034|gb|EGP87129.1| hypothetical protein MYCGRDRAFT_109444 [Zymoseptoria tritici
IPO323]
Length = 362
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 142/330 (43%), Gaps = 45/330 (13%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT-AIESPDD 365
+L +R + + G +IGK G + +R +G + V + V+TVT A+ D
Sbjct: 40 QLTLRAIVTSKEAGVIIGKAGQNVADLRDKTGVRAGVSKVVPGVHDRVLTVTGALTGIAD 99
Query: 366 IKSMAVEAVLLLQTKINDE----DDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKAD 421
+ ++++ ++ +T IRLL+S +G IIG+ G I +I+ +
Sbjct: 100 AYGLVADSLVKGAPQMGMGGVVGSPNTHPIRLLISHNQMGTIIGRQGLKIKQIQDASGVR 159
Query: 422 VRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHI 481
+ K P+ + + +VEV G ++ ++ +I L DD + +
Sbjct: 160 MVAQKEMLPQ---STERIVEVQGTPEGIQKSVWEIGKCLIDDEQRGY---------GTVL 207
Query: 482 YSSGTGIS--MPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSM 539
YS + PP + PVG G G S + G G+ +P
Sbjct: 208 YSPAVRVQGGAPPAINGASPVG-----------FGGGAPRSFARTGNGADFTSGAP---A 253
Query: 540 SSYSSKLYGGL---PPPL--------TLEVLVPANAVGKVIGKAGSNLANIRKISGATIE 588
SSY + GG PPP+ T + +PA+ VG +IG+ GS ++ IRK SGA I
Sbjct: 254 SSYPPRRNGGSDAGPPPVVEDGEDIQTQNISIPADMVGCIIGRGGSKISEIRKSSGARIS 313
Query: 589 MSDS-KSSRGDRVALISGTPEQKRAAENLI 617
++ + G+R+ I+G P A L+
Sbjct: 314 IAKAPHDESGERMFTITGGPSANEKALYLL 343
>gi|354502186|ref|XP_003513168.1| PREDICTED: far upstream element-binding protein 3-like isoform 1
[Cricetulus griseus]
Length = 574
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 138/348 (39%), Gaps = 56/348 (16%)
Query: 315 PFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDE--CVITVT--AIESPDDIKSMA 370
P +G +IG+GG I I+ SG +I + E CV+T T +IE +
Sbjct: 85 PDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPESIEQAKRLLGQI 144
Query: 371 VEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKAD-VRISKGDK 429
V+ ND D ++ LL+ + +G +IGK G I ++++RT V I G
Sbjct: 145 VDRCRNGPGFHNDIDGNSTIQELLIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPL 204
Query: 430 PKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSGTG-- 487
P AD + +V R+ +++II R +D A D G R D +G G
Sbjct: 205 PTGADKPLRITGDPFKVQQAREMVLEII-REKDQA--DFRGVR-----GDFASRAGGGSI 256
Query: 488 -ISMPPLLPSI----------------------------------PPVGPLGYDQRADSG 512
+S+P I +GP Q A
Sbjct: 257 EVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPERAAQVMGPPDRCQHAAHI 316
Query: 513 SGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKA 572
+L++ G G L++ +S GG+ + VPA+ G VIGK
Sbjct: 317 INELILTAQERDGLGGLAVARGRGRGRGDWSVGTPGGV---QEITYTVPADKCGLVIGKG 373
Query: 573 GSNLANIRKISGATIEMSDSKSSRGD---RVALISGTPEQKRAAENLI 617
G N+ +I + SGA +E+ + D R+ I G P+Q A +LI
Sbjct: 374 GENIKSINQQSGAHVELQRNPPPNTDPNLRIFTIRGAPQQIEVARHLI 421
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%)
Query: 554 LTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAA 613
+T E VP VG +IG+ G ++ I+ SG I+++ S +R +++GTPE A
Sbjct: 78 ITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPESIEQA 137
Query: 614 ENLI 617
+ L+
Sbjct: 138 KRLL 141
Score = 39.3 bits (90), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 75/164 (45%), Gaps = 24/164 (14%)
Query: 44 PDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFN 103
PD ++G +IG+ G+ I+ I+ E+ ++++ G +R + E +E
Sbjct: 85 PDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVL---TGTPESIE------ 135
Query: 104 DKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIK 163
A+ L ++ N D D +E +L+P+S+ +IGK G TIK
Sbjct: 136 ------QAKRLLGQIVDRCRNGPGFHNDIDGNSTIQE---LLIPASKVGLVIGKGGETIK 186
Query: 164 RLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKA 207
+L+ +T + V +D PT + D + I+G+ V++A
Sbjct: 187 QLQERTGVKM-VMIQDGPLPTGA-----DKPLRITGDPFKVQQA 224
Score = 38.9 bits (89), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 5/86 (5%)
Query: 537 GSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSR 596
G ++S+ GG ++EV VP AVG VIG+ G + I+ +G I+
Sbjct: 242 GVRGDFASRAGGG-----SIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGIS 296
Query: 597 GDRVALISGTPEQKRAAENLIQAFIM 622
+R A + G P++ + A ++I I+
Sbjct: 297 PERAAQVMGPPDRCQHAAHIINELIL 322
>gi|383849051|ref|XP_003700160.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like
[Megachile rotundata]
Length = 460
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 86/176 (48%), Gaps = 12/176 (6%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSM 369
+R+L P G +IGKGG I +R A I V D E V+T+++ + P ++ +
Sbjct: 49 LRLLIPSKVAGSIIGKGGQNITKLRSQYKASIIVPDCPG--PERVLTISS-DLPTVLQVL 105
Query: 370 AVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDK 429
E V L+ + D + +R+LV GCIIGK G I E+R++T A ++I
Sbjct: 106 N-EVVPNLEENGSRHGSDEIDVRMLVHQSQAGCIIGKGGLKIKELREKTGARIKIYSH-- 162
Query: 430 PKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNP--PVGADHIYS 483
C + D L+ + G+ + D + ++I ++ LK G NP P D Y+
Sbjct: 163 -CCPHSTDRLISICGKPSTCIDCIRELIATIKTSPLK---GMNNPYDPHNFDDFYA 214
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 78/176 (44%), Gaps = 38/176 (21%)
Query: 26 NEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVT 85
+++ +G++E R+L P V GS+IGK G+ I +R + +A + V D PG +RV+T
Sbjct: 39 HKRYRQGDDE---LRLLIPSKVAGSIIGKGGQNITKLRSQYKASIIVPD-CPGP-ERVLT 93
Query: 86 IYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKE-ECQI 144
I S L V + V N +N + E + ++
Sbjct: 94 ISSD-------------------------LPTVLQVLNEVVPNLEENGSRHGSDEIDVRM 128
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGE 200
LV SQ+ IIGK G IK LR KT IK+ +H C D + I G+
Sbjct: 129 LVHQSQAGCIIGKGGLKIKELREKTGARIKIY-------SHCCPHSTDRLISICGK 177
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%)
Query: 555 TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAE 614
+ +V +P + G +IGK G+ + IR SGA I + + DR+ I+G P Q + A+
Sbjct: 387 STQVTIPKDLAGAIIGKGGARIRKIRSDSGAGITIDEPLPGSNDRIITITGLPSQIQMAQ 446
Query: 615 NLIQAFI 621
L+Q +
Sbjct: 447 YLLQQSV 453
Score = 42.0 bits (97), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Query: 18 GKNQKRRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFP 77
G NQ + N K + + I P + G++IGK G I IR ++ A + + +P P
Sbjct: 372 GNNQGNQGNMGSNKTSTQVTI-----PKDLAGAIIGKGGARIRKIRSDSGAGITIDEPLP 426
Query: 78 GAKDRVVTI 86
G+ DR++TI
Sbjct: 427 GSNDRIITI 435
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 6/89 (6%)
Query: 298 GLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITV 357
G G S + +V P + G +IGKGG I+ IR SGA I +D+ ++ +IT+
Sbjct: 376 GNQGNMGSNKTSTQVTIPKDLAGAIIGKGGARIRKIRSDSGAGITIDEPLPGSNDRIITI 435
Query: 358 TAIESPDDIKSMAVEAVLLLQTKINDEDD 386
T + P I+ A LLQ +++ D
Sbjct: 436 TGL--PSQIQM----AQYLLQQSVHENAD 458
>gi|391348567|ref|XP_003748518.1| PREDICTED: poly(rC)-binding protein 3-like [Metaseiulus
occidentalis]
Length = 418
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 92/200 (46%), Gaps = 28/200 (14%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDD--------TKDNRDECVITVTA 359
L +R++ ++G +IGK G IK R+ SGA+I++ D T EC++ +
Sbjct: 12 LTVRMIMQGKEVGSIIGKKGDNIKKFREDSGAKINISDGTCPERIVTVTGSTECILKAFS 71
Query: 360 I-----ESPDDIKSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEI 414
+ E + E+ L Q + + VT+RL+V + G +IGK+GS I EI
Sbjct: 72 LICAKFEEMSSLSGSPTESALNGQKVLPGQTPPPVTLRLIVPASQCGSLIGKAGSKIREI 131
Query: 415 RKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNP 474
R+ T A V+++ P ++ + V V G +V + QI + + P
Sbjct: 132 REITGASVQVASEMLP---NSTERTVTVAGTADAVTKCIYQICCVMLE----------CP 178
Query: 475 PVGADHIYSSGTGISMPPLL 494
P GA Y +MPP++
Sbjct: 179 PKGATIPYRPKP--AMPPVI 196
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Query: 530 SMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEM 589
S+ SP S + L G PPP+TL ++VPA+ G +IGKAGS + IR+I+GA++++
Sbjct: 82 SLSGSPTESALNGQKVLPGQTPPPVTLRLIVPASQCGSLIGKAGSKIREIREITGASVQV 141
Query: 590 -SDSKSSRGDRVALISGT 606
S+ + +R ++GT
Sbjct: 142 ASEMLPNSTERTVTVAGT 159
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 40/63 (63%)
Query: 555 TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAE 614
T E+ +P + +G VIGK G + IR++SGATI++S ++ +R ISGTPE A+
Sbjct: 306 TQEMQIPNDLIGCVIGKGGQKINEIRQLSGATIKISSTEEGSKERCVSISGTPEAINLAQ 365
Query: 615 NLI 617
LI
Sbjct: 366 YLI 368
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 88/187 (47%), Gaps = 18/187 (9%)
Query: 36 SVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKED 95
++ R++ +GS+IGK G I R+++ A++ + D +R+VT+ +
Sbjct: 11 TLTVRMIMQGKEVGSIIGKKGDNIKKFREDSGAKINISDGT--CPERIVTVTGSTEC--- 65
Query: 96 VEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDN-DKKRKEKEECQILVPSSQSANI 154
+ F+ +CA + + + + + N + +++VP+SQ ++
Sbjct: 66 --ILKAFSL---ICAKFEEMSSLSGSPTESALNGQKVLPGQTPPPVTLRLIVPASQCGSL 120
Query: 155 IGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAI 214
IGKAG+ I+ +R T S++V + T + V ++G ++AV K ++ I +
Sbjct: 121 IGKAGSKIREIREITGASVQVASEMLPNST-------ERTVTVAGTADAVTKCIYQICCV 173
Query: 215 MYKFSPR 221
M + P+
Sbjct: 174 MLECPPK 180
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 29/43 (67%)
Query: 44 PDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTI 86
P+ +IG VIGK G+ IN IRQ + A +K+ G+K+R V+I
Sbjct: 312 PNDLIGCVIGKGGQKINEIRQLSGATIKISSTEEGSKERCVSI 354
Score = 40.0 bits (92), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 390 TIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRIS---KGDKPKCA--DANDELVEVVG 444
T + + + +IGC+IGK G INEIR+ + A ++IS +G K +C E + +
Sbjct: 306 TQEMQIPNDLIGCVIGKGGQKINEIRQLSGATIKISSTEEGSKERCVSISGTPEAINLAQ 365
Query: 445 EVGSVRDALVQIILRLRDDALKD 467
+ + R ++ RL+ + +D
Sbjct: 366 YLINTRQVSLRKASRLQSNHRRD 388
Score = 39.3 bits (90), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 14/80 (17%)
Query: 303 SQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIES 362
S ++E+ I P + IG VIGKGG I IRQ SGA I + T++ E ++++
Sbjct: 304 SSTQEMQI----PNDLIGCVIGKGGQKINEIRQLSGATIKISSTEEGSKERCVSISGTP- 358
Query: 363 PDDIKSMAVEAVLLLQTKIN 382
EA+ L Q IN
Sbjct: 359 ---------EAINLAQYLIN 369
>gi|310792993|gb|EFQ28454.1| KH domain-containing protein [Glomerella graminicola M1.001]
Length = 384
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 145/339 (42%), Gaps = 46/339 (13%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTA-IESPDD 365
+L +R + + G +IGK G + +R +G + V + V+T+T +S +
Sbjct: 46 QLTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTITGGCQSVAE 105
Query: 366 IKSMAVEAVLLLQTKIND----EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKAD 421
++ +A+L + +++ T I+LL+S +G IIG+ G I I+ +
Sbjct: 106 AYAIVAKALLEGAPSMGMGGVVQNNGTHPIKLLISHNQMGTIIGRQGLKIKHIQDVSGVR 165
Query: 422 VRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPV----- 476
+ K P+ + + +VEV G ++ A+ +I L DD + PV
Sbjct: 166 MVAQKEMLPQ---STERIVEVQGTPEGIKGAIWEICKCLVDDWQRGTGTVLYNPVVRTQP 222
Query: 477 --------GADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGS 528
G+ YSSG G S P + G G D S+S+ +
Sbjct: 223 GTTSTAGSGSTPNYSSGGGRSSDYSAPRVMRTGN-GAD-----------FSASNTNNNNN 270
Query: 529 LSMGDSPYGSMSSYSSKLYGGLPPPL---------TLEVLVPANAVGKVIGKAGSNLANI 579
G PYG S + G PP T + +PA+ VG +IG+AGS ++ I
Sbjct: 271 NGGGGRPYGRRSDSDAASRG---PPTHDENGEELQTQNISIPADMVGCIIGRAGSKISEI 327
Query: 580 RKISGATIEMSDS-KSSRGDRVALISGTPEQKRAAENLI 617
RK SGA I ++ + G+R+ I GT + +A L+
Sbjct: 328 RKTSGARISIAKAPHDDTGERMFTIMGTAKANESALFLL 366
>gi|113677906|ref|NP_001038254.1| neuro-oncological ventral antigen 1 [Danio rerio]
gi|213624727|gb|AAI71499.1| Neuro-oncological ventral antigen 1 [Danio rerio]
gi|213627516|gb|AAI71495.1| Neuro-oncological ventral antigen 1 [Danio rerio]
Length = 495
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 85/174 (48%), Gaps = 19/174 (10%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD-----NRDECVI--TVTA 359
E ++VL P G +IGKGG TI +++ +GA I + +KD C+I TV A
Sbjct: 56 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEA 115
Query: 360 IESPDDI----------KSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGS 409
+ + S E V +LQ + D +L+V + G IIGK G+
Sbjct: 116 LNGVHNFIAEKVREMPQSSQKTEPVSILQPQTTVNPDRIKQAKLIVPNSTAGLIIGKGGA 175
Query: 410 IINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDD 463
+ + +++ A V++S+ KP+ + + +V V GE R A+ I+ ++++D
Sbjct: 176 TVKAVMEQSGAWVQLSQ--KPEGINLQERVVTVSGEPEQNRKAVEIIVQKIQED 227
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 117/274 (42%), Gaps = 55/274 (20%)
Query: 27 EKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV---DPFPGAKDRV 83
++ G E ++L P GS+IGK G+ I +++ET A +K+ D +PG +RV
Sbjct: 47 KRSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERV 106
Query: 84 VTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRK------ 137
I V +AL VH IA V + +K +
Sbjct: 107 CLIQGTV----------------------EALNGVHNFIAEKVREMPQSSQKTEPVSILQ 144
Query: 138 --------EKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAM 189
++ +++VP+S + IIGK GAT+K + ++ ++++ K +
Sbjct: 145 PQTTVNPDRIKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKP-----EGINL 199
Query: 190 EFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPG 249
+ + V +SGE E +K A+ I+ K +ED P ++ S I P G
Sbjct: 200 Q-ERVVTVSGEPEQNRK---AVEIIVQKI--QED-PQSSSCLNISYSNITGPVANSNPTG 252
Query: 250 GLYPNADPILPS----RSVPSILGAARVPDLQGY 279
+ N+ +LP+ + ++LG A + + G+
Sbjct: 253 SPFANSTEVLPNAAAAATASTLLGQAGLAGMGGF 286
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS---SRGDRVALISGTPEQKRA 612
L+VL+P+ A G +IGK G + ++K +GATI++S SK +RV LI GT E
Sbjct: 59 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNG 118
Query: 613 AENLI 617
N I
Sbjct: 119 VHNFI 123
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS---SRGDRVALISGTPEQKRA 612
+E+ VP N VG ++GK G L ++++GA I++S +R I+G+P +A
Sbjct: 412 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGSPAATQA 471
Query: 613 AENLI 617
A+ LI
Sbjct: 472 AQYLI 476
Score = 39.3 bits (90), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 557 EVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS--SRGDRVALISGTPEQKRAAE 614
+++VP + G +IGK G+ + + + SGA +++S + +RV +SG PEQ R A
Sbjct: 158 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQNRKAV 217
Query: 615 NLI 617
+I
Sbjct: 218 EII 220
>gi|322698395|gb|EFY90165.1| KH domain RNA-binding protein [Metarhizium acridum CQMa 102]
Length = 367
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 146/335 (43%), Gaps = 55/335 (16%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
+L +R + + G +IGKGG + +R +G + V + V+T+T E
Sbjct: 46 QLTLRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTITG-ECDAIS 104
Query: 367 KSMAVEAVLLLQ----------TKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
++ A+ A LL+ + N + I+LL+S +G IIG+ G I I+
Sbjct: 105 RAYAIVARALLEGAPAMGMGGIVQSNGTHLSSTAIKLLISHNQMGTIIGRQGLKIKHIQD 164
Query: 417 RTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPV 476
+ + K P+ + + +VEV G ++ A+ +I L DD
Sbjct: 165 VSGVRMVAQKEMLPQ---STERIVEVQGTPDGIQRAVWEICKCLVDD------------- 208
Query: 477 GADHIYSSGTGISM-PPLLPSIPPVGPLG--YDQ---RADSGSGIGMLSSSSLYGYGSLS 530
+ GTG + P++ + G LG Y+ R+D GS M + + G +
Sbjct: 209 -----WQRGTGTVLYNPVVRTQAGSGGLGSNYNNGGGRSDYGSPRVMRTGN---GADFSN 260
Query: 531 MGDSPYGSMSSYSSKLYGGLPPPL--------TLEVLVPANAVGKVIGKAGSNLANIRKI 582
G P+ S + G PP T + +PA+ VG +IG+AGS ++ IRK
Sbjct: 261 GGVRPFSRRSDSDAASRG--PPTHDENGEEIQTQNISIPADMVGCIIGRAGSKISEIRKT 318
Query: 583 SGATIEMSDSKSSRGDRVALISGTPEQKRAAENLI 617
SGA I ++ + G+R+ I GT + +A L+
Sbjct: 319 SGARISIAKT----GERMFTIMGTAKANESALFLL 349
>gi|383863655|ref|XP_003707295.1| PREDICTED: RNA-binding protein Nova-2-like isoform 2 [Megachile
rotundata]
Length = 535
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 91/169 (53%), Gaps = 18/169 (10%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD-----NRDECVITVTAIESPD 364
++VL P G +IGKGG TI +++ +GA++ + + D C+IT ++E+
Sbjct: 68 LKVLVPGVAAGAIIGKGGDTIAQLQKDTGAKVKISKSHDFYPGTTERVCLIT-GSLEAIM 126
Query: 365 DIKSMAVEAV-----LLLQTKINDEDDDTVT-----IRLLVSSKVIGCIIGKSGSIINEI 414
+ ++ + L L+T ++ E T +++LV + G IIGK+G+ I +I
Sbjct: 127 AVMDFIMDKIREKPDLTLKTTVDSESGKTTAERDKQVKILVPNSTAGMIIGKAGNYIKQI 186
Query: 415 RKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDD 463
++ + + V+IS+ K K + + V+GE + R+AL+ I+ ++ DD
Sbjct: 187 KEESGSYVQISQ--KAKDVSLQERCITVIGEKENNRNALMMILAKVADD 233
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 87/181 (48%), Gaps = 28/181 (15%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV---DPFPGAKDRVVTIYSHVKDKEDV 96
++L P G++IGK G I ++++T A+VK+ D +PG +RV I +
Sbjct: 69 KVLVPGVAAGAIIGKGGDTIAQLQKDTGAKVKISKSHDFYPGTTERVCLITGSL------ 122
Query: 97 EVDDEFNDKEPLCAAQDALL-KVHAAIANAVANATDNDKKRKEKE---ECQILVPSSQSA 152
E + A D ++ K+ + D++ + E + +ILVP+S +
Sbjct: 123 ---------EAIMAVMDFIMDKIREKPDLTLKTTVDSESGKTTAERDKQVKILVPNSTAG 173
Query: 153 NIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAIS 212
IIGKAG IK+++ ++ + +++ S+ +++ + + + GE E + AL I
Sbjct: 174 MIIGKAGNYIKQIKEESGSYVQI-----SQKAKDVSLQ-ERCITVIGEKENNRNALMMIL 227
Query: 213 A 213
A
Sbjct: 228 A 228
Score = 42.0 bits (97), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS---SRGDRVALISGTPEQKRA 612
L+VLVP A G +IGK G +A ++K +GA +++S S +RV LI+G+ E A
Sbjct: 68 LKVLVPGVAAGAIIGKGGDTIAQLQKDTGAKVKISKSHDFYPGTTERVCLITGSLEAIMA 127
Query: 613 AENLI 617
+ I
Sbjct: 128 VMDFI 132
>gi|367043886|ref|XP_003652323.1| hypothetical protein THITE_2113686 [Thielavia terrestris NRRL 8126]
gi|346999585|gb|AEO65987.1| hypothetical protein THITE_2113686 [Thielavia terrestris NRRL 8126]
Length = 482
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 88/384 (22%), Positives = 161/384 (41%), Gaps = 90/384 (23%)
Query: 50 SVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLC 109
+VIGK G+ ++ IRQ + A+ V D GA +R++T+ V
Sbjct: 136 TVIGKGGENVSKIRQMSGAKCTVSDYQKGAVERILTVSGIV------------------- 176
Query: 110 AAQDALLKVHAAIANAVANATDNDKKRKEKEE--CQILVPSSQSANIIGKAGATIKRLRS 167
DA+ K I + N N+ + + ++L+P +IIGK GA IK ++
Sbjct: 177 ---DAVAKAFGLIIRTLNNEPLNEPSNQHSKTYPLRLLIPHILIGSIIGKGGARIKEIQE 233
Query: 168 KTRTSIKVTPKDASEPTHSC-AMEFDNFVLISGESEAVKKALFAI-SAIMYKFSPREDIP 225
+ + +AS+ SC + + +++ G ++AV A + + S ++ + + R P
Sbjct: 234 ASGARL-----NASD---SCLPLSTERSLVVMGVADAVHIATYYVGSTLLEQLNERFGGP 285
Query: 226 LET--TVREAPPSIIIPSDVPI-----YPPGGLYPNAD---------------------- 256
+ R P+ +P + + P GG Y N D
Sbjct: 286 AASAYATRSGGPAGTVPGGMQVVPYNPQPAGGNYGNRDNYYRGRQDPRAYHMPPQSYAPP 345
Query: 257 -----PILPSRSVP---------SILGAARVPDLQG--YADTGNTWPVYSTGLSLVSGLV 300
P +P+ +VP VP G+ P + + +G+
Sbjct: 346 YGHPHPAIPNPAVPMPYGAHAAGGYGAGPHVPVHHAGPAGPHGHAGP-HGQPMPGGAGMP 404
Query: 301 GASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAI 360
GA ++++ I P + +G +IGKGG I IRQ SG+ I +++ +DN +E ++T+T
Sbjct: 405 GAPLTQQIYI----PNDMVGAIIGKGGQKINEIRQISGSVIKINEPQDNSNERLVTITGT 460
Query: 361 ESPDDIKSMAVEAVLLLQTKINDE 384
E + I A+ +L +++ E
Sbjct: 461 EECNRI------ALYMLYSRLESE 478
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 65/125 (52%), Gaps = 12/125 (9%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
+ IR + + VIGKGG + IRQ SGA+ V D + E ++TV+ I +
Sbjct: 123 IHIRAVISSPEAATVIGKGGENVSKIRQMSGAKCTVSDYQKGAVERILTVSGI-----VD 177
Query: 368 SMAVEAVLLLQTKIND-------EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKA 420
++A L+++T N+ + T +RLL+ +IG IIGK G+ I EI++ + A
Sbjct: 178 AVAKAFGLIIRTLNNEPLNEPSNQHSKTYPLRLLIPHILIGSIIGKGGARIKEIQEASGA 237
Query: 421 DVRIS 425
+ S
Sbjct: 238 RLNAS 242
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 51/86 (59%), Gaps = 3/86 (3%)
Query: 535 PYGSMSSYSSKLYGG--LP-PPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSD 591
P+G + + GG +P PLT ++ +P + VG +IGK G + IR+ISG+ I++++
Sbjct: 386 PHGHAGPHGQPMPGGAGMPGAPLTQQIYIPNDMVGAIIGKGGQKINEIRQISGSVIKINE 445
Query: 592 SKSSRGDRVALISGTPEQKRAAENLI 617
+ + +R+ I+GT E R A ++
Sbjct: 446 PQDNSNERLVTITGTEECNRIALYML 471
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 33/47 (70%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTI 86
+I P+ ++G++IGK G+ IN IRQ + + +K+ +P + +R+VTI
Sbjct: 411 QIYIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQDNSNERLVTI 457
>gi|389630232|ref|XP_003712769.1| hypothetical protein MGG_16887 [Magnaporthe oryzae 70-15]
gi|351645101|gb|EHA52962.1| hypothetical protein MGG_16887 [Magnaporthe oryzae 70-15]
gi|440469705|gb|ELQ38806.1| Poly(rC)-binding protein 3 [Magnaporthe oryzae Y34]
gi|440482607|gb|ELQ63080.1| Poly(rC)-binding protein 3 [Magnaporthe oryzae P131]
Length = 370
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 88/336 (26%), Positives = 144/336 (42%), Gaps = 53/336 (15%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
+L +R + + G +IGKGG + +R +G + V + V+T+T + I
Sbjct: 45 QLTVRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTITG--GCEGI 102
Query: 367 -KSMAVEAVLLLQTKIND------EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
K+ AV A LL+ + ++ T I+LL+S +G IIG+ G I I+ +
Sbjct: 103 SKAYAVVARALLEGAPSMGMGGVVSNNGTHPIKLLISHNQMGTIIGRQGLKIKHIQDVSG 162
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGAD 479
+ K P+ + + +VEV G ++ A+ +I L DD
Sbjct: 163 VRMVAQKEMLPQ---STERVVEVQGTPEGIQRAVWEICKCLIDD---------------- 203
Query: 480 HIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGM-----LSSSSLYGYGSLSMGDS 534
+ GTG L + P G Q SG+G G SSS + G+ + D
Sbjct: 204 --WQRGTGTV---LYNPVVRTQPAGATQMGSSGAGYGTSNRGDYSSSRVTRTGNGA--DF 256
Query: 535 PYGSMSSYSSKL---YGGLPPPL---------TLEVLVPANAVGKVIGKAGSNLANIRKI 582
G SY+ + PP T + +PA+ VG +IG+AGS ++ IRK
Sbjct: 257 SNGGGRSYNRRSDSDAANRGPPTHDENGEEIQTQNISIPADMVGCIIGRAGSKISEIRKT 316
Query: 583 SGATIEMSDS-KSSRGDRVALISGTPEQKRAAENLI 617
SGA I ++ + G+R+ I G+ + A L+
Sbjct: 317 SGARISIAKAPHDETGERMFTIMGSAKANETALFLL 352
>gi|302792551|ref|XP_002978041.1| hypothetical protein SELMODRAFT_108378 [Selaginella moellendorffii]
gi|300154062|gb|EFJ20698.1| hypothetical protein SELMODRAFT_108378 [Selaginella moellendorffii]
Length = 324
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 133/323 (41%), Gaps = 67/323 (20%)
Query: 29 DEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV---DPFPGAKDRVVT 85
+ E + R L + GSVIGK G I+ + ++ AR+++ + FPG DRV
Sbjct: 7 ENNAGETTTNLRFLVTNTAAGSVIGKGGSTISDFQAQSGARIQLSRNHEYFPGTSDRVAV 66
Query: 86 IYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQIL 145
+ + D L A Q + K+ D+++ + + ++L
Sbjct: 67 LSGSLADV--------------LTAFQLIISKI----------IKDDNQDDTKSIQVKLL 102
Query: 146 VPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVK 205
VP + IIGK G+ IK+ ++ SIK++ +D P D V I G + +
Sbjct: 103 VPKTVCGAIIGKGGSNIKKFVEDSQASIKLSSQDQLLPG-----VIDRIVTIGGNVDQII 157
Query: 206 KALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVP 265
K A++ I+ K + E ETT S +YP G P V
Sbjct: 158 K---AVTLILTKLT-EESSYTETT-----------STPLVYPGTGPTPFI--------VR 194
Query: 266 SILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGK 325
+ A+ P LQ G P + VGA S + + P IG ++G+
Sbjct: 195 CVYHAS--PGLQNLRRNGPGPP-------MPVAYVGALTSS---VTIGIPDEHIGFILGR 242
Query: 326 GGGTIKSIRQASGAQIDVDDTKD 348
G T++ ++Q+SGA+I V D D
Sbjct: 243 AGKTLQELQQSSGAKIKVSDRGD 265
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 136/307 (44%), Gaps = 55/307 (17%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSM 369
+R L G VIGKGG TI + SGA+I + + V + S+
Sbjct: 17 LRFLVTNTAAGSVIGKGGSTISDFQAQSGARIQLSRNHEYFPGTSDRVAVLSG-----SL 71
Query: 370 A--VEAVLLLQTKI----NDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVR 423
A + A L+ +KI N +D ++ ++LLV V G IIGK GS I + + ++A ++
Sbjct: 72 ADVLTAFQLIISKIIKDDNQDDTKSIQVKLLVPKTVCGAIIGKGGSNIKKFVEDSQASIK 131
Query: 424 ISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYS 483
+S D+ D +V + G V + A+ I+ +L ++ S
Sbjct: 132 LSSQDQ-LLPGVIDRIVTIGGNVDQIIKAVTLILTKLTEE-------------------S 171
Query: 484 SGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYS 543
S T + PL+ P GP + R + G L + G G M + G+++S
Sbjct: 172 SYTETTSTPLV--YPGTGPTPFIVRCVYHASPG-LQNLRRNGPGP-PMPVAYVGALTS-- 225
Query: 544 SKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALI 603
++ + +P +G ++G+AG L +++ SGA I++SD RGD +
Sbjct: 226 -----------SVTIGIPDEHIGFILGRAGKTLQELQQSSGAKIKVSD----RGD---FV 267
Query: 604 SGTPEQK 610
+GT +K
Sbjct: 268 TGTEYRK 274
Score = 39.7 bits (91), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 24 RINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDP---FPGAK 80
+I + D + + +S+ ++L P V G++IGK G I ++++A +K+ PG
Sbjct: 84 KIIKDDNQDDTKSIQVKLLVPKTVCGAIIGKGGSNIKKFVEDSQASIKLSSQDQLLPGVI 143
Query: 81 DRVVTIYSHV 90
DR+VTI +V
Sbjct: 144 DRIVTIGGNV 153
Score = 39.3 bits (90), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS---SRGDRVALISGTPEQKRA 612
L LV A G VIGK GS +++ + SGA I++S + DRVA++SG+
Sbjct: 17 LRFLVTNTAAGSVIGKGGSTISDFQAQSGARIQLSRNHEYFPGTSDRVAVLSGSLADVLT 76
Query: 613 AENLI 617
A LI
Sbjct: 77 AFQLI 81
>gi|403299426|ref|XP_003940488.1| PREDICTED: RNA-binding protein Nova-2 [Saimiri boliviensis
boliviensis]
Length = 508
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 86/175 (49%), Gaps = 21/175 (12%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD-----NRDECVITVTAIE 361
E ++VL P G +IGKGG TI +++ +GA I + +KD C++ TA E
Sbjct: 216 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTA-E 274
Query: 362 SPDDIKSMAVEAVL-------------LLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSG 408
+ + + S E V +LQ + D +L+V + G IIGK G
Sbjct: 275 ALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGG 334
Query: 409 SIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDD 463
+ + + +++ A V++S+ KP+ + + +V V GE V A+ I+ ++++D
Sbjct: 335 ATVKAVMEQSGAWVQLSQ--KPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQED 387
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 88/189 (46%), Gaps = 17/189 (8%)
Query: 26 NEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV---DPFPGAKDR 82
++ G E ++L P GS+IGK G+ I +++ET A +K+ D +PG +R
Sbjct: 206 TKRSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTER 265
Query: 83 VVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEEC 142
V + E + F E + A+ K + N + T + R ++
Sbjct: 266 VCLVQG---TAEALNAVHSF-IAEKVREIPQAMTK--PEVVNILQPQTTMNPDR--AKQA 317
Query: 143 QILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESE 202
+++VP+S + IIGK GAT+K + ++ ++++ K + V +SGE E
Sbjct: 318 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQ------ERVVTVSGEPE 371
Query: 203 AVKKALFAI 211
V KA+ AI
Sbjct: 372 QVHKAVSAI 380
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 42/69 (60%), Gaps = 7/69 (10%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSK---SSRGDRVALISGTPEQKRA 612
L+VL+P+ A G +IGK G + ++K +GATI++S SK +RV L+ GT E
Sbjct: 219 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAE---- 274
Query: 613 AENLIQAFI 621
A N + +FI
Sbjct: 275 ALNAVHSFI 283
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 5/64 (7%)
Query: 558 VLVPANAVGKVIGKAGSNLANIRKISGATIEMSDS----KSSRGDRVALISGTPEQKRAA 613
+ VP N VG ++GK G L ++++GA I++S +R RV I+G+P +AA
Sbjct: 427 IAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVT-ITGSPAATQAA 485
Query: 614 ENLI 617
+ LI
Sbjct: 486 QYLI 489
>gi|395826635|ref|XP_003786522.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
[Otolemur garnettii]
Length = 577
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 142/314 (45%), Gaps = 47/314 (14%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSM 369
+R+L P +G +IGK G TI++I + + ++IDV K+N ++ +P+ S
Sbjct: 198 LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDV-HRKENAGAAEKAISVHSTPEGCSSA 256
Query: 370 AVEAVLLLQTKIND-EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGD 428
+ ++ + D + D V +++L + +G +IGK G + ++ + T+ + IS
Sbjct: 257 CKMILEIMHKEAKDTKTADEVPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQ 316
Query: 429 KPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSGTGI 488
+ + + V G + + A +I+ ++R+ D V A + S
Sbjct: 317 DLTLYNP-ERTITVKGAIENCCRAEQEIMKKVREAYEND--------VAAMSLQSH---- 363
Query: 489 SMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYG 548
L+P + + G+ SSS++ S G +PY S +
Sbjct: 364 ----LIPGL-----------NLAAVGLFPASSSAVPPPPSSVTGAAPYSS--------FM 400
Query: 549 GLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMS-----DSKSSRGDRVALI 603
P ++V +PA AVG +IGK G ++ + + + A+I+++ DSK R+ +I
Sbjct: 401 QAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKV----RMVII 456
Query: 604 SGTPEQKRAAENLI 617
+G PE + A+ I
Sbjct: 457 TGPPEAQFKAQGRI 470
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 89/375 (23%), Positives = 157/375 (41%), Gaps = 74/375 (19%)
Query: 143 QILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKD---ASEP---THS--------CA 188
++LVP+ IIGK GATI+ + +T++ I V K+ A+E HS C
Sbjct: 199 RLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTPEGCSSACK 258
Query: 189 MEFDNFVLISGESEAVKKA------LFAISAIMYKFSPREDIPLETTVREAPPSIIIPS- 241
M + ++ E++ K A + A + + + +E L+ ++ I I S
Sbjct: 259 MILE---IMHKEAKDTKTADEVPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSL 315
Query: 242 -DVPIYPP-------GGL-----------------YPN--ADPILPSRSVPSILGAARVP 274
D+ +Y P G + Y N A L S +P L A V
Sbjct: 316 QDLTLYNPERTITVKGAIENCCRAEQEIMKKVREAYENDVAAMSLQSHLIPG-LNLAAVG 374
Query: 275 DLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIR 334
+ P TG + S + A + E +++V P +G +IGK G IK +
Sbjct: 375 LFPASSSAVPPPPSSVTGAAPYSSFMQAPEQE--MVQVFIPAQAVGAIIGKKGQHIKQLS 432
Query: 335 QASGAQIDVD--DTKDNRDECVITVTAIESPDDIKSMA---VEAVLLLQTKINDEDDDTV 389
+ + A I + +T D++ VI I P + + A + L + +++ +
Sbjct: 433 RFASASIKIAPPETPDSKVRMVI----ITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKL 488
Query: 390 TIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDE-LVEVVGEVGS 448
+ V + G +IGK G +NE++ T A+V + + P D ND+ +V+++G +
Sbjct: 489 ETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQTP---DENDQVIVKIIGHFYA 545
Query: 449 -------VRDALVQI 456
+RD L Q+
Sbjct: 546 SQMAQRKIRDILAQV 560
Score = 46.2 bits (108), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 95/248 (38%), Gaps = 67/248 (27%)
Query: 28 KDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKV---VDPFPGAKDRVV 84
KD K +E V +IL + +G +IGK G+ + + Q+T ++ + D +R +
Sbjct: 269 KDTKTADE-VPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYNPERTI 327
Query: 85 TIYSHVKDKEDVEVDDEFNDKEPLC-AAQDALLKVHAAIANAVANATDNDK--------- 134
T+ + E C A Q+ + KV A N VA +
Sbjct: 328 TVKGAI---------------ENCCRAEQEIMKKVREAYENDVAAMSLQSHLIPGLNLAA 372
Query: 135 ----------------------------KRKEKEECQILVPSSQSANIIGKAGATIKRLR 166
+ E+E Q+ +P+ IIGK G IK+L
Sbjct: 373 VGLFPASSSAVPPPPSSVTGAAPYSSFMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLS 432
Query: 167 SKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYK---FSPRED 223
SIK+ P + P M V+I+G EA KA I + + F P+E+
Sbjct: 433 RFASASIKIAPPET--PDSKVRM-----VIITGPPEAQFKAQGRIYGKLKEENFFGPKEE 485
Query: 224 IPLETTVR 231
+ LET +R
Sbjct: 486 VKLETHIR 493
Score = 42.7 bits (99), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 24/148 (16%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDP-FPGAKDRVVTIYSHVKDK 93
E + ++ P +G++IGK G+ I + + A +K+ P P +K R+V I
Sbjct: 404 EQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVII------- 456
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
+A K I + K + K E I VP+S +
Sbjct: 457 ---------------TGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGR 501
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+IGK G T+ L++ T + V P+D +
Sbjct: 502 VIGKGGKTVNELQNLTAAEV-VVPRDQT 528
>gi|344300282|gb|EGW30622.1| hypothetical protein SPAPADRAFT_63451 [Spathaspora passalidarum
NRRL Y-27907]
Length = 374
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 133/324 (41%), Gaps = 66/324 (20%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSM 369
+RVL + G +IG+ G I IR + + + + E ++TV+ + + K++
Sbjct: 83 VRVLVSAKEAGCLIGQNGKVIDGIRDETNTKAGISRLQPGSHERILTVSG-KLDNCAKAL 141
Query: 370 AVEAVLLLQTKINDE--------------DDDTVTIRLLVSSKVIGCIIGKSGSIINEIR 415
+ A L + I +++T +RLLV + +G +IG G I +I+
Sbjct: 142 SYFAQALCDSTIETYNYFPLKQLSANPCIENETTILRLLVPNAQMGTLIGSKGLRIQQIQ 201
Query: 416 KRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDD--ALKDRDGSRN 473
+ SK P +N+ LVE+ G V + DAL I L +D AL G+ N
Sbjct: 202 SNYHISMIASKSFLP---GSNERLVELQGTVNDLYDALRIIARCLIEDISAL----GNTN 254
Query: 474 PPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGD 533
V H +S G++ + S P +G SS SLS
Sbjct: 255 YYVPRGH-HSQYNGVNTTNGVSSTTPT------------NGRNFARKSSHIATTSLSF-- 299
Query: 534 SPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSK 593
P + VG +IGK GS + +RK+SGATI +S+
Sbjct: 300 ---------------------------PNDIVGALIGKNGSRIQGVRKVSGATIGISEEV 332
Query: 594 SSRGDRVALISGTPEQKRAAENLI 617
+ +R+ ISG+P A+ L+
Sbjct: 333 EGKNERIFTISGSPHAVEKAKGLL 356
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 72/331 (21%), Positives = 134/331 (40%), Gaps = 60/331 (18%)
Query: 29 DEKGNEESVI-YRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIY 87
++K N ++VI R+L G +IG++GKVI+ IR ET + + PG+ +R++T
Sbjct: 72 NDKSNGDAVINVRVLVSAKEAGCLIGQNGKVIDGIRDETNTKAGISRLQPGSHERILT-- 129
Query: 88 SHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVP 147
V K D + LC D+ ++ + + + N E ++LVP
Sbjct: 130 --VSGKLDNCAKALSYFAQALC---DSTIETYNYFP--LKQLSANPCIENETTILRLLVP 182
Query: 148 SSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKA 207
++Q +IG G I++++S S+ + K ++ + V + G + A
Sbjct: 183 NAQMGTLIGSKGLRIQQIQSNYHISM-IASKSFLPGSN------ERLVELQGTVNDLYDA 235
Query: 208 LFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSI 267
L I+ + EDI + Y P G + + V +
Sbjct: 236 LRIIARCLI-----EDIS-------------ALGNTNYYVPRGHHSQYN------GVNTT 271
Query: 268 LGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGG 327
G + G + + +T LS + +VGA +IGK G
Sbjct: 272 NGVSSTTPTNGRNFARKSSHIATTSLSFPNDIVGA-------------------LIGKNG 312
Query: 328 GTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
I+ +R+ SGA I + + + ++E + T++
Sbjct: 313 SRIQGVRKVSGATIGISEEVEGKNERIFTIS 343
>gi|166796167|gb|AAI59042.1| igf2bp3 protein [Xenopus (Silurana) tropicalis]
Length = 559
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/313 (21%), Positives = 142/313 (45%), Gaps = 36/313 (11%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
E+ +R+L P +G +IGK G TI++I + + ++ID+ K+N +T +P+
Sbjct: 170 EVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHR-KENAGAAEKPITIHSTPEGC 228
Query: 367 KSMAVEAVLLLQTKINDED-DDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRIS 425
+ + ++Q + D + + +++L + +G +IGK G + +I + T + IS
Sbjct: 229 SAACKIIMEIMQKEAQDTKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITIS 288
Query: 426 KGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSG 485
+ + + V G + + A +I+ ++R+ D + A ++ +
Sbjct: 289 PLQDLTLYNP-ERTITVKGSIEACAKAEEEIMKKIRESYEND--------IAAMNLQAH- 338
Query: 486 TGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSK 545
L+P + + + +G+ SS S +S S
Sbjct: 339 -------LIPGL-------------NLNALGLFPPSSSGMPPPSVGVPS---PTTSTSYP 375
Query: 546 LYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGD-RVALIS 604
+G P T+ + +PA AVG +IGK G ++ + + +GA+I+++ ++ R+ +I+
Sbjct: 376 PFGQQPESETVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKLRMVIIT 435
Query: 605 GTPEQKRAAENLI 617
G PE + A+ I
Sbjct: 436 GPPEAQFKAQGRI 448
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 94/414 (22%), Positives = 169/414 (40%), Gaps = 74/414 (17%)
Query: 34 EESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKD 92
+ V R+L P +G++IGK G I +I ++T++++ + GA ++ +TI+S
Sbjct: 168 QSEVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAEKPITIHS---- 223
Query: 93 KEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSA 152
E AA ++++ A D K E+ +IL ++
Sbjct: 224 -----------TPEGCSAACKIIMEIMQKEA--------QDTKFTEEIPLKILAHNNFVG 264
Query: 153 NIIGKAGATIKRLRSKTRTSIKVTP-KDASEPTHSCAMEFDNFVLISGESEAVKKALFAI 211
+IGK G +K++ T T I ++P +D + + + + G EA KA
Sbjct: 265 RLIGKEGRNLKKIEQDTDTKITISPLQDLT------LYNPERTITVKGSIEACAKAE--- 315
Query: 212 SAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAA 271
IM K +RE+ + I ++ + GL NA + P S +
Sbjct: 316 EEIMKK------------IRESYENDIAAMNLQAHLIPGLNLNALGLFPPSSSGMPPPSV 363
Query: 272 RVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIK 331
VP T ++P + Q E + + P +G +IGK G IK
Sbjct: 364 GVPS----PTTSTSYPPF------------GQQPESETVHLFIPALAVGAIIGKQGQHIK 407
Query: 332 SIRQASGAQIDVDDTK--DNRDECVITVTAIESPDDIKSMA---VEAVLLLQTKINDEDD 386
+ + +GA I + + D + VI I P + + A + L + +++
Sbjct: 408 QLSRFAGASIKIAPAEGPDAKLRMVI----ITGPPEAQFKAQGRIYGKLKEENFFGPKEE 463
Query: 387 DTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELV 440
+ + V S G +IGK G +NE++ T A+V + + P D ND++V
Sbjct: 464 VKLEAHIKVPSYAAGRVIGKGGKTVNELQNLTSAEVVVPRDQTP---DENDQVV 514
>gi|148226749|ref|NP_001081752.1| insulin-like growth factor 2 mRNA-binding protein 3-A [Xenopus
laevis]
gi|82227951|sp|O73932.1|IF23A_XENLA RecName: Full=Insulin-like growth factor 2 mRNA-binding protein
3-A; Short=IGF2 mRNA-binding protein 3-A; Short=IMP-3-A;
AltName: Full=69 kDa RNA-binding protein A; AltName:
Full=IGF-II mRNA-binding protein 3-A; AltName: Full=KH
domain-containing transcription factor B3-A; AltName:
Full=RNA-binding protein Vera-A; AltName:
Full=Trans-acting factor B3-A; AltName: Full=VICKZ
family member 3-A; AltName: Full=VLE-binding protein A;
AltName: Full=Vg1 RNA-binding protein A; Short=Vg1
RBP-A; AltName: Full=Vg1 localization element binding
protein A; AltName: Full=VgLE-binding and ER association
protein A
gi|3136158|gb|AAC41285.1| RNA binding protein Vera [Xenopus laevis]
gi|3172449|gb|AAC18598.1| Vg1 RNA binding protein variant D [Xenopus laevis]
gi|213623978|gb|AAI70477.1| Vg1 RNA binding protein Vera [Xenopus laevis]
gi|213623980|gb|AAI70479.1| Vg1 RNA binding protein Vera [Xenopus laevis]
gi|213625273|gb|AAI70224.1| Vg1 RNA binding protein Vera [Xenopus laevis]
gi|213626044|gb|AAI70196.1| Vg1 RNA binding protein Vera [Xenopus laevis]
Length = 594
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 69/313 (22%), Positives = 142/313 (45%), Gaps = 36/313 (11%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
E+ +R+L P +G +IGK G TI++I + + ++ID+ K+N +T +P+
Sbjct: 205 EVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHR-KENAGAAEKPITIHSTPEGC 263
Query: 367 KSMAVEAVLLLQTKINDED-DDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRIS 425
+ + ++Q + D + + +++L + +G +IGK G + +I + T + IS
Sbjct: 264 SAACKIIMEIMQKEAQDTKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITIS 323
Query: 426 KGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSG 485
+ + + V G + A +I+ ++R+ D + A ++ +
Sbjct: 324 PLQDLTLYNP-ERTITVKGSIEPCAKAEEEIMKKIRESYEND--------IAAMNLQAH- 373
Query: 486 TGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSK 545
L+P + + + +G+ SSS S SS S
Sbjct: 374 -------LIPGL-------------NLNALGLFPSSSSGMPPPSVGVPS---PTSSTSYP 410
Query: 546 LYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGD-RVALIS 604
+G P T+ + +PA AVG +IGK G ++ + + +GA+I+++ ++ R+ +I+
Sbjct: 411 PFGQQPESETVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKLRMVIIT 470
Query: 605 GTPEQKRAAENLI 617
G PE + A+ I
Sbjct: 471 GPPEAQFKAQGRI 483
Score = 45.4 bits (106), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 65/143 (45%), Gaps = 12/143 (8%)
Query: 303 SQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTK--DNRDECVITVTAI 360
Q E + + P +G +IGK G IK + + +GA I + + D + VI I
Sbjct: 414 QQPESETVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKLRMVI----I 469
Query: 361 ESPDDIKSMA---VEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKR 417
P + + A + L + +++ + + V S G +IGK G +NE++
Sbjct: 470 TGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIKVPSYAAGRVIGKGGKTVNELQNL 529
Query: 418 TKADVRISKGDKPKCADANDELV 440
T A+V + + P D NDE+V
Sbjct: 530 TSAEVVVPRDQTP---DENDEVV 549
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 48/100 (48%), Gaps = 10/100 (10%)
Query: 135 KRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNF 194
++ E E + +P+ IIGK G IK+L SIK+ P A P M
Sbjct: 414 QQPESETVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAP--AEGPDAKLRM----- 466
Query: 195 VLISGESEAVKKALFAISAIMYK---FSPREDIPLETTVR 231
V+I+G EA KA I + + F P+E++ LET ++
Sbjct: 467 VIITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIK 506
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Query: 299 LVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDV--DDTKDNRDECVIT 356
G + +L + P GRVIGKGG T+ ++ + A++ V D T D DE V+
Sbjct: 492 FFGPKEEVKLETHIKVPSYAAGRVIGKGGKTVNELQNLTSAEVVVPRDQTPDENDEVVVK 551
Query: 357 VTAIESPDDIKSMAVEAVL 375
+T + ++ +L
Sbjct: 552 ITGHFYASQLAQRKIQEIL 570
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 58/148 (39%), Gaps = 24/148 (16%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPF-PGAKDRVVTIYSHVKDK 93
ES + P +G++IGK G+ I + + A +K+ P AK R+V I
Sbjct: 417 ESETVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKLRMVII------- 469
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
+A K I + K + K E I VPS +
Sbjct: 470 ---------------TGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIKVPSYAAGR 514
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+IGK G T+ L++ T + V P+D +
Sbjct: 515 VIGKGGKTVNELQNLTSAEV-VVPRDQT 541
>gi|348564372|ref|XP_003467979.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
[Cavia porcellus]
Length = 741
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/325 (21%), Positives = 148/325 (45%), Gaps = 46/325 (14%)
Query: 298 GLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITV 357
G V + +L +R+L P +G +IGK G TI++I + + ++IDV K+N ++
Sbjct: 349 GSVSKQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHR-KENAGAAEKSI 407
Query: 358 TAIESPDDIKSMAVEAVLLLQTKIND-EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
T + +P+ + + ++ + D + + + +++L + +G +IGK G + +I +
Sbjct: 408 TILSTPEGTSAACKSILEIMHKEAQDIKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQ 467
Query: 417 RTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPV 476
T + IS + + + + V G V + A +I+ ++R ++ ++ S N +
Sbjct: 468 DTDTKITISPLQELTLYNP-ERTITVKGSVETCAKAEEEIMKKIR-ESYENDIASMN--L 523
Query: 477 GADHIYSSGTGISMPPLLP---SIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGD 533
A I G ++ L P +PP SG M
Sbjct: 524 QAHLI--PGLNLNALGLFPPTSGMPP---------PTSGPPSAM---------------- 556
Query: 534 SPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSK 593
PY ++ T+ + +PA +VG +IGK G ++ + + +GA+I+++ ++
Sbjct: 557 PPYPQFEQSETE---------TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAE 607
Query: 594 SSRGD-RVALISGTPEQKRAAENLI 617
+ R+ +I+G PE + A+ I
Sbjct: 608 APDAKVRMVIITGPPEAQFKAQGRI 632
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 95/441 (21%), Positives = 177/441 (40%), Gaps = 84/441 (19%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKEDVEV 98
R+L P +G++IGK G I +I ++T++++ V GA ++ +TI S
Sbjct: 362 RLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILS---------- 411
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
E AA ++L++ + D K E+ +IL ++ +IGK
Sbjct: 412 -----TPEGTSAACKSILEI--------MHKEAQDIKFTEEIPLKILAHNNFVGRLIGKE 458
Query: 159 GATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKF 218
G +K++ T T I ++P + + + G E KA IM K
Sbjct: 459 GRNLKKIEQDTDTKITISPLQ-----ELTLYNPERTITVKGSVETCAKAE---EEIMKK- 509
Query: 219 SPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQG 278
+RE+ + I ++ + GL NA + P S P G
Sbjct: 510 -----------IRESYENDIASMNLQAHLIPGLNLNALGLFPPTS-------GMPPPTSG 551
Query: 279 YADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASG 338
+P + QSE + + P +G +IGK G IK + + +G
Sbjct: 552 PPSAMPPYPQFE-------------QSETETVHLFIPALSVGAIIGKQGQHIKQLSRFAG 598
Query: 339 AQIDV--DDTKDNRDECVITVTAIESPDDIKSMA---VEAVLLLQTKINDEDDDTVTIRL 393
A I + + D + VI I P + + A + + + ++ +++ + +
Sbjct: 599 ASIKIAPAEAPDAKVRMVI----ITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHI 654
Query: 394 LVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDE-LVEVVGEVGS---- 448
V S G +IGK G +NE++ + A+V + + P D ND+ +V++ G +
Sbjct: 655 RVPSFAAGRVIGKGGKTVNELQNLSSAEVVVPRDQTP---DENDQVVVKITGHFYACQVA 711
Query: 449 ---VRDALVQIILRLRDDALK 466
+++ L Q+ + AL+
Sbjct: 712 QRKIQEILTQVKQHQQQKALQ 732
Score = 39.3 bits (90), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 78/203 (38%), Gaps = 34/203 (16%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDP-FPGAKDRVVTIYSHVKDK 93
E+ + P +G++IGK G+ I + + A +K+ P AK R+V I
Sbjct: 566 ETETVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVII------- 618
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
+A K I + K + K E I VPS +
Sbjct: 619 ---------------TGPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGR 663
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVL-ISGESEAVKKALFAIS 212
+IGK G T+ L++ + + V P+D + E D V+ I+G A + A I
Sbjct: 664 VIGKGGKTVNELQNLSSAEV-VVPRDQT------PDENDQVVVKITGHFYACQVAQRKIQ 716
Query: 213 AIMYKFSPREDIPLETTVREAPP 235
I+ + + + ++ PP
Sbjct: 717 EILTQVKQHQQ---QKALQSGPP 736
>gi|242024312|ref|XP_002432572.1| heterogeneous nuclear ribonucleoprotein k, putative [Pediculus
humanus corporis]
gi|212518032|gb|EEB19834.1| heterogeneous nuclear ribonucleoprotein k, putative [Pediculus
humanus corporis]
Length = 365
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 85/177 (48%), Gaps = 20/177 (11%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSM 369
IR+L P G +IGKGG I +R A + V D E ++TV A D+ +M
Sbjct: 25 IRLLIPSKVAGSIIGKGGHNISKLRTEHNASVTVPDCPG--PERILTVAA-----DLDTM 77
Query: 370 AVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDK 429
L + ++I +D + IR+LV GCIIGK G I E+R++T A ++I
Sbjct: 78 -----LRVVSEILPNLEDVIDIRMLVHQSQAGCIIGKGGLKIKELREKTGARIKIYSN-- 130
Query: 430 PKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNP--PVGADHIYSS 484
C + D +V++ G+ DA+ + + L+ +K G NP P D +S
Sbjct: 131 -CCPQSTDRIVQINGKGNLCVDAIRECMELLKTSPIK---GMNNPYDPHNFDEYFSQ 183
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 88/208 (42%), Gaps = 49/208 (23%)
Query: 13 DNDRDGKNQKRRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKV 72
D + G QKR K+ GNE R+L P V GS+IGK G I+ +R E A V V
Sbjct: 6 DGPQGGGPQKRY---KNSDGNE----IRLLIPSKVAGSIIGKGGHNISKLRTEHNASVTV 58
Query: 73 VDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDN 132
D PG +R++T+ A D +L+V + I + + D
Sbjct: 59 PD-CPGP-ERILTV----------------------AADLDTMLRVVSEILPNLEDVID- 93
Query: 133 DKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFD 192
++LV SQ+ IIGK G IK LR KT IK+ ++ C D
Sbjct: 94 ---------IRMLVHQSQAGCIIGKGGLKIKELREKTGARIKIY-------SNCCPQSTD 137
Query: 193 NFVLISGESEAVKKALFAISAIMYKFSP 220
V I+G+ A+ ++ K SP
Sbjct: 138 RIVQINGKGNLCVDAIRECMELL-KTSP 164
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 43/77 (55%), Gaps = 7/77 (9%)
Query: 547 YGGLPPPL-----TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVA 601
+GG PPL + +V +P + G +IGK GS + IR SGA I + + DR+
Sbjct: 281 FGG--PPLGGEKNSTQVTIPKDLAGAIIGKGGSRIRKIRMESGAAITIDEPLPGSNDRII 338
Query: 602 LISGTPEQKRAAENLIQ 618
ISGTP Q + A+ L+Q
Sbjct: 339 TISGTPNQIQMAQYLLQ 355
Score = 42.7 bits (99), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 30/47 (63%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTI 86
++ P + G++IGK G I IR E+ A + + +P PG+ DR++TI
Sbjct: 294 QVTIPKDLAGAIIGKGGSRIRKIRMESGAAITIDEPLPGSNDRIITI 340
>gi|189528952|ref|XP_001923490.1| PREDICTED: RNA-binding protein Nova-1 isoform 1 [Danio rerio]
Length = 496
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 85/174 (48%), Gaps = 19/174 (10%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD-----NRDECVI--TVTA 359
E ++VL P G +IGKGG TI +++ +GA I + +KD C+I TV A
Sbjct: 56 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEA 115
Query: 360 IESPDDI----------KSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGS 409
+ + D + E V +LQ + D +L+V + G IIGK G+
Sbjct: 116 LNNVHDFIAEKVREMPQSAQKTEPVSILQPQTTVNPDRVKQAKLIVPNSTAGLIIGKGGA 175
Query: 410 IINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDD 463
+ + +++ A V++S+ KP + + +V + GE R A+ I+ ++++D
Sbjct: 176 TVKAVMEQSGAWVQLSQ--KPDGINLQERVVTISGEPEQNRKAVEIIVQKIQED 227
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 86/194 (44%), Gaps = 35/194 (18%)
Query: 27 EKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV---DPFPGAKDRV 83
++ G E ++L P GS+IGK G+ I +++ET A +K+ D +PG +RV
Sbjct: 47 KRTNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERV 106
Query: 84 VTIYSHVKDKEDV---------EVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDK 134
I V+ +V E+ EP+ Q T N
Sbjct: 107 CLIQGTVEALNNVHDFIAEKVREMPQSAQKTEPVSILQP--------------QTTVNPD 152
Query: 135 KRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNF 194
+ K + +++VP+S + IIGK GAT+K + ++ ++++ K P E
Sbjct: 153 RVK---QAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQK----PDGINLQE--RV 203
Query: 195 VLISGESEAVKKAL 208
V ISGE E +KA+
Sbjct: 204 VTISGEPEQNRKAV 217
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 41/69 (59%), Gaps = 7/69 (10%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS---SRGDRVALISGTPEQKRA 612
L+VL+P+ A G +IGK G + ++K +GATI++S SK +RV LI GT E
Sbjct: 59 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVE---- 114
Query: 613 AENLIQAFI 621
A N + FI
Sbjct: 115 ALNNVHDFI 123
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS---SRGDRVALISGTPEQKRA 612
+E+ VP N VG ++GK G L ++++GA I++S +R I+G+P +A
Sbjct: 413 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGSPAATQA 472
Query: 613 AENLI 617
A+ LI
Sbjct: 473 AQYLI 477
>gi|432895613|ref|XP_004076075.1| PREDICTED: RNA-binding protein Nova-1-like isoform 1 [Oryzias
latipes]
Length = 503
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 87/174 (50%), Gaps = 19/174 (10%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD-----NRDECVI--TVTA 359
E ++VL P G +IGKGG TI +++ +GA I + +KD C+I TV A
Sbjct: 64 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEA 123
Query: 360 IESPDDIKSMAV----------EAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGS 409
+ S + + V E V +LQ + D +L+V + G IIGK G+
Sbjct: 124 LNSVHNFIAEKVREMPQSAQKPEPVSILQPQTTVNPDRVKQAKLIVPNSTAGLIIGKGGA 183
Query: 410 IINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDD 463
+ + +++ A V++S+ KP+ + + +V + GE R A+ I+ ++++D
Sbjct: 184 TVKAVMEQSGAWVQLSQ--KPEGINLQERVVTISGEPEQNRKAVEIIVQKIQED 235
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 88/209 (42%), Gaps = 35/209 (16%)
Query: 12 RDNDRDGKNQKRRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVK 71
R D ++ ++ G E ++L P GS+IGK G+ I +++ET A +K
Sbjct: 40 RKRPLDAPAEEAGCTKRTNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIK 99
Query: 72 VV---DPFPGAKDRVVTIYSHVKDKEDV---------EVDDEFNDKEPLCAAQDALLKVH 119
+ D +PG +RV I V+ V E+ EP+ Q
Sbjct: 100 LSKSKDFYPGTTERVCLIQGTVEALNSVHNFIAEKVREMPQSAQKPEPVSILQP------ 153
Query: 120 AAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKD 179
T N + K + +++VP+S + IIGK GAT+K + ++ ++++ K
Sbjct: 154 --------QTTVNPDRVK---QAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKP 202
Query: 180 ASEPTHSCAMEFDNFVLISGESEAVKKAL 208
+ V ISGE E +KA+
Sbjct: 203 EGINLQ------ERVVTISGEPEQNRKAV 225
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS---SRGDRVALISGTPEQKRA 612
L+VL+P+ A G +IGK G + ++K +GATI++S SK +RV LI GT E +
Sbjct: 67 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNS 126
Query: 613 AENLI 617
N I
Sbjct: 127 VHNFI 131
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS---SRGDRVALISGTPEQKRA 612
+E+ VP N VG ++GK G L ++++GA I++S +R I+G+P +A
Sbjct: 420 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGSPAATQA 479
Query: 613 AENLI 617
A+ LI
Sbjct: 480 AQYLI 484
Score = 39.7 bits (91), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 557 EVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS--SRGDRVALISGTPEQKRAAE 614
+++VP + G +IGK G+ + + + SGA +++S + +RV ISG PEQ R A
Sbjct: 166 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTISGEPEQNRKAV 225
Query: 615 NLI 617
+I
Sbjct: 226 EII 228
>gi|195154050|ref|XP_002017936.1| GL17034 [Drosophila persimilis]
gi|194113732|gb|EDW35775.1| GL17034 [Drosophila persimilis]
Length = 506
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 85/177 (48%), Gaps = 11/177 (6%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
E +R+L P + G VIGKGG I+ +R Q +K NRD I I+ DI
Sbjct: 22 EDTVRILIPSSIAGAVIGKGGQHIQKMR----TQKVEGKSKPNRDS--IPKATIQISADI 75
Query: 367 KSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISK 426
+ A ++ K +E D+ +RLL+ + GC+IGK G I EIR R R K
Sbjct: 76 E--ATLEIITEMLKYFEERDEDFDVRLLIHQSLAGCVIGKGGQKIKEIRDRI--GCRFLK 131
Query: 427 GDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYS 483
+ D +V+ VG+ V +A+ ++I RD +K + + P+ D +Y+
Sbjct: 132 VFSNVAPQSTDRVVQTVGKQAQVIEAVREVITLTRDTPIKGAIHNYD-PMNFDRVYA 187
>gi|426201505|gb|EKV51428.1| hypothetical protein AGABI2DRAFT_182391 [Agaricus bisporus var.
bisporus H97]
Length = 340
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 140/331 (42%), Gaps = 57/331 (17%)
Query: 306 EELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDD 365
+ L +R L G +IGK G + +R+ +G + V E V+TV+ S D
Sbjct: 23 DSLTLRALVSTKDAGVIIGKAGKNVADLREQTGVKAGVSKVIPGVHERVLTVSG--SVDA 80
Query: 366 IKSMAVEAVLLLQTK------INDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
+ + L T ++ +IRLL+S ++G IIG++G I I+ +
Sbjct: 81 VAKAYTLIITQLVTASPASPVVSSPSTIHTSIRLLISHNLMGTIIGRNGLKIKAIQDNSG 140
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGAD 479
A + SK P+ + + +VEV G ++ A+ +I L +D
Sbjct: 141 ARMVASKEMLPQ---STERIVEVQGAPEAIGRAVEEIGKCLLED---------------- 181
Query: 480 HIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGD------ 533
+ G G + P D R+ G S+S YG + GD
Sbjct: 182 --WERGLGTVL---------FHPGTVDDRSGGNRRQGSYSASPQYGAQRRANGDGNVRAR 230
Query: 534 -SPYGS--MSSYSSKLYGGLPPPLTLE---VLVPANAVGKVIGKAGSNLANIRKISGATI 587
SP S S SS+ PP L + +P++ VG +IG++G+ + IR++SG+ I
Sbjct: 231 ASPPASPTHSPISSQ------PPANLRTQNISIPSDMVGCIIGRSGTKITEIRRLSGSKI 284
Query: 588 EMSDS-KSSRGDRVALISGTPEQKRAAENLI 617
++ + G+R+ I GTPE A L+
Sbjct: 285 SIAKAPHDETGERMFTIVGTPEANEKALFLL 315
>gi|395844390|ref|XP_003794945.1| PREDICTED: far upstream element-binding protein 3 [Otolemur
garnettii]
Length = 572
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 146/346 (42%), Gaps = 52/346 (15%)
Query: 315 PFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDE--CVITVT--AIESPDDIKSMA 370
P +G +IG+GG I I+ SG +I + E CV+T T +IE +
Sbjct: 85 PDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPESIEQAKRLLGQI 144
Query: 371 VEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKAD-VRISKGDK 429
V+ + ND D ++ +L+ + +G +IGK G I ++++RT V I G
Sbjct: 145 VDRCRNGPSFHNDVDGNSTIQEILIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPL 204
Query: 430 PKCADANDELVEVVGEVGSVRDA--LVQIILRLRDD----ALKDRDGSRNPPVGADHIYS 483
P D+ + + G+ V+ A +V I+R +D +++ GSR +G I
Sbjct: 205 PT---GTDKPLRITGDPFKVQQAREMVLEIIREKDQADFRSVRGDFGSR---MGGGSIEV 258
Query: 484 S------------------------GTGISMPP---LLP--SIPPVGPLGYDQRADSGSG 514
S G I P + P + +GP Q A
Sbjct: 259 SVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPERAAQVMGPPDRCQHAAHIIS 318
Query: 515 IGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGS 574
+L++ G+GSL++ S +S GG+ + VPA+ G VIGK G
Sbjct: 319 ELILTAQERDGFGSLAVPRGRGRSRGDWSVGTPGGV---QEITYTVPADKCGLVIGKGGE 375
Query: 575 NLANIRKISGATIEMSDSKSSRGD---RVALISGTPEQKRAAENLI 617
N+ +I + SGA +E+ + D R+ I G P+Q A +LI
Sbjct: 376 NIKSINQQSGAHVELQRNPPPNTDPNLRIFTIRGIPQQIEVARHLI 421
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%)
Query: 554 LTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAA 613
+T E VP VG +IG+ G ++ I+ SG I+++ S +R +++GTPE A
Sbjct: 78 ITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPESIEQA 137
Query: 614 ENLI 617
+ L+
Sbjct: 138 KRLL 141
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 76/164 (46%), Gaps = 24/164 (14%)
Query: 44 PDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFN 103
PD ++G +IG+ G+ I+ I+ E+ ++++ G +R + E +E
Sbjct: 85 PDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVL---TGTPESIE------ 135
Query: 104 DKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIK 163
A+ L ++ N + D D +E IL+P+S+ +IGK G TIK
Sbjct: 136 ------QAKRLLGQIVDRCRNGPSFHNDVDGNSTIQE---ILIPASKVGLVIGKGGETIK 186
Query: 164 RLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKA 207
+L+ +T + V +D PT + D + I+G+ V++A
Sbjct: 187 QLQERTGVKM-VMIQDGPLPTGT-----DKPLRITGDPFKVQQA 224
Score = 39.3 bits (90), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 542 YSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVA 601
+ S++ GG ++EV VP AVG VIG+ G + I+ +G I+ +R A
Sbjct: 247 FGSRMGGG-----SIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPERAA 301
Query: 602 LISGTPEQKRAAENLIQAFIM 622
+ G P++ + A ++I I+
Sbjct: 302 QVMGPPDRCQHAAHIISELIL 322
>gi|156368623|ref|XP_001627792.1| predicted protein [Nematostella vectensis]
gi|156214712|gb|EDO35692.1| predicted protein [Nematostella vectensis]
Length = 390
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 99/197 (50%), Gaps = 30/197 (15%)
Query: 23 RRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV---DPFPGA 79
R+ ++ G +S I +IL P+ GS+IGK G+ I ++Q T AR+K+ +PG
Sbjct: 32 RQPYKRSNFGPAKSPILKILVPNYAAGSIIGKGGQNIAQVQQTTGARIKLSPNNQYYPGT 91
Query: 80 KDRVVTIYSHVKDKEDVEVDDEFNDK---EPLCAAQDALLKVHAAIANAVANATDNDKKR 136
++R+ I V++ V++ D DK EP I +++ + D ++ +
Sbjct: 92 QERIGLIMGEVENI--VQMLDFVIDKIRQEP------------QGIKASMSISFDRERAK 137
Query: 137 KEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVL 196
+ K I+VP+S + IIGKAG+ IK + +T I+++ KDA S A E V
Sbjct: 138 QMK----IIVPNSTAGMIIGKAGSAIKSISEQTGARIQISQKDA----ESVAGE--RIVC 187
Query: 197 ISGESEAVKKALFAISA 213
+ G E V A I++
Sbjct: 188 VGGSQEQVTAACVIITS 204
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 137/304 (45%), Gaps = 28/304 (9%)
Query: 309 VIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD----NRDECVITVTAIESPD 364
++++L P G +IGKGG I ++Q +GA+I + ++ + + +E+
Sbjct: 47 ILKILVPNYAAGSIIGKGGQNIAQVQQTTGARIKLSPNNQYYPGTQERIGLIMGEVENIV 106
Query: 365 DIKSMAVEAV------LLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRT 418
+ ++ + + I+ + + ++++V + G IIGK+GS I I ++T
Sbjct: 107 QMLDFVIDKIRQEPQGIKASMSISFDRERAKQMKIIVPNSTAGMIIGKAGSAIKSISEQT 166
Query: 419 KADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDD---ALKDR---DGSR 472
A ++IS+ D A + +V V G V A V I ++++D AL + G
Sbjct: 167 GARIQISQKDAESVA--GERIVCVGGSQEQVTAACVIITSKVQEDPEHALNNNIMYSGLT 224
Query: 473 NPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIG-----MLSSSSLYGYG 527
G + +G+ S ++ + LG A + + +L+ ++L
Sbjct: 225 TSRAGHTNGQLAGSAFSSGLPFSALSGLSALGLTNTATAQNTTTSATNHILAQAALMSGS 284
Query: 528 SLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATI 587
+L+ +P S ++ SS + TLE+ VP +G ++GK G + + SGA I
Sbjct: 285 NLNNPMAPPTSTATSSS-----IQSSATLEITVPDELIGAILGKGGKTITEFMQYSGARI 339
Query: 588 EMSD 591
++S
Sbjct: 340 QVSQ 343
Score = 42.0 bits (97), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 10/82 (12%)
Query: 542 YSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS---SRGD 598
Y +G P+ L++LVP A G +IGK G N+A +++ +GA I++S + +
Sbjct: 35 YKRSNFGPAKSPI-LKILVPNYAAGSIIGKGGQNIAQVQQTTGARIKLSPNNQYYPGTQE 93
Query: 599 RVALISGTPEQKRAAENLIQAF 620
R+ LI G EN++Q
Sbjct: 94 RIGLIMGE------VENIVQML 109
>gi|354502188|ref|XP_003513169.1| PREDICTED: far upstream element-binding protein 3-like isoform 2
[Cricetulus griseus]
Length = 481
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 137/344 (39%), Gaps = 56/344 (16%)
Query: 319 IGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDE--CVITVT--AIESPDDIKSMAVEAV 374
+G +IG+GG I I+ SG +I + E CV+T T +IE + V+
Sbjct: 2 VGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPESIEQAKRLLGQIVDRC 61
Query: 375 LLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKAD-VRISKGDKPKCA 433
ND D ++ LL+ + +G +IGK G I ++++RT V I G P A
Sbjct: 62 RNGPGFHNDIDGNSTIQELLIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGA 121
Query: 434 DANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSGTG---ISM 490
D + + + G+ V+ A ++ +R+ D G R D +G G +S+
Sbjct: 122 D---KPLRITGDPFKVQQAREMVLEIIREKDQADFRGVR-----GDFASRAGGGSIEVSV 173
Query: 491 PPLL----------------------------PSIPP------VGPLGYDQRADSGSGIG 516
P I P +GP Q A
Sbjct: 174 PRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPERAAQVMGPPDRCQHAAHIINEL 233
Query: 517 MLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNL 576
+L++ G G L++ +S GG+ + VPA+ G VIGK G N+
Sbjct: 234 ILTAQERDGLGGLAVARGRGRGRGDWSVGTPGGV---QEITYTVPADKCGLVIGKGGENI 290
Query: 577 ANIRKISGATIEMSDSKSSRGD---RVALISGTPEQKRAAENLI 617
+I + SGA +E+ + D R+ I G P+Q A +LI
Sbjct: 291 KSINQQSGAHVELQRNPPPNTDPNLRIFTIRGAPQQIEVARHLI 334
Score = 38.9 bits (89), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 5/86 (5%)
Query: 537 GSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSR 596
G ++S+ GG ++EV VP AVG VIG+ G + I+ +G I+
Sbjct: 155 GVRGDFASRAGGG-----SIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGIS 209
Query: 597 GDRVALISGTPEQKRAAENLIQAFIM 622
+R A + G P++ + A ++I I+
Sbjct: 210 PERAAQVMGPPDRCQHAAHIINELIL 235
>gi|432895615|ref|XP_004076076.1| PREDICTED: RNA-binding protein Nova-1-like isoform 2 [Oryzias
latipes]
Length = 444
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 87/174 (50%), Gaps = 19/174 (10%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD-----NRDECVI--TVTA 359
E ++VL P G +IGKGG TI +++ +GA I + +KD C+I TV A
Sbjct: 5 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEA 64
Query: 360 IESPDDIKSMAV----------EAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGS 409
+ S + + V E V +LQ + D +L+V + G IIGK G+
Sbjct: 65 LNSVHNFIAEKVREMPQSAQKPEPVSILQPQTTVNPDRVKQAKLIVPNSTAGLIIGKGGA 124
Query: 410 IINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDD 463
+ + +++ A V++S+ KP+ + + +V + GE R A+ I+ ++++D
Sbjct: 125 TVKAVMEQSGAWVQLSQ--KPEGINLQERVVTISGEPEQNRKAVEIIVQKIQED 176
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 81/187 (43%), Gaps = 35/187 (18%)
Query: 34 EESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV---DPFPGAKDRVVTIYSHV 90
E ++L P GS+IGK G+ I +++ET A +K+ D +PG +RV I V
Sbjct: 3 EGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTV 62
Query: 91 KDKEDV---------EVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEE 141
+ V E+ EP+ Q T N + K +
Sbjct: 63 EALNSVHNFIAEKVREMPQSAQKPEPVSILQP--------------QTTVNPDRVK---Q 105
Query: 142 CQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGES 201
+++VP+S + IIGK GAT+K + ++ ++++ K + V ISGE
Sbjct: 106 AKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQ------ERVVTISGEP 159
Query: 202 EAVKKAL 208
E +KA+
Sbjct: 160 EQNRKAV 166
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS---SRGDRVALISGTPEQKRA 612
L+VL+P+ A G +IGK G + ++K +GATI++S SK +RV LI GT E +
Sbjct: 8 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNS 67
Query: 613 AENLI 617
N I
Sbjct: 68 VHNFI 72
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS---SRGDRVALISGTPEQKRA 612
+E+ VP N VG ++GK G L ++++GA I++S +R I+G+P +A
Sbjct: 361 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGSPAATQA 420
Query: 613 AENLI 617
A+ LI
Sbjct: 421 AQYLI 425
Score = 39.7 bits (91), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 557 EVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS--SRGDRVALISGTPEQKRAAE 614
+++VP + G +IGK G+ + + + SGA +++S + +RV ISG PEQ R A
Sbjct: 107 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTISGEPEQNRKAV 166
Query: 615 NLI 617
+I
Sbjct: 167 EII 169
>gi|392337608|ref|XP_001075246.3| PREDICTED: RNA-binding protein Nova-2 [Rattus norvegicus]
Length = 560
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 85/174 (48%), Gaps = 19/174 (10%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD-----NRDECVI--TVTA 359
E ++VL P G +IGKGG TI +++ +GA I + +KD C++ T A
Sbjct: 117 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEA 176
Query: 360 IESPDDIKSMAV----------EAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGS 409
+ + + V E V +LQ + D +L+V + G IIGK G+
Sbjct: 177 LNAAHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGA 236
Query: 410 IINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDD 463
+ + +++ A V++S+ KP+ + + +V V GE V A+ I+ ++++D
Sbjct: 237 TVKAVMEQSGAWVQLSQ--KPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQED 288
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 92/192 (47%), Gaps = 21/192 (10%)
Query: 23 RRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV---DPFPGA 79
+RIN G E ++L P GS+IGK G+ I +++ET A +K+ D +PG
Sbjct: 108 KRIN----TGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGT 163
Query: 80 KDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEK 139
+RV + E + F E + A+ K + N + T + R
Sbjct: 164 TERVCLVQG---TAEALNAAHSF-IAEKVREIPQAMTKPE--VVNILQPQTTMNPDR--A 215
Query: 140 EECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISG 199
++ +++VP+S + IIGK GAT+K + ++ ++++ K ++ + V +SG
Sbjct: 216 KQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKP-----EGINLQ-ERVVTVSG 269
Query: 200 ESEAVKKALFAI 211
E E V KA+ AI
Sbjct: 270 EPEQVHKAVSAI 281
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSK---SSRGDRVALISGTPEQKRA 612
L+VL+P+ A G +IGK G + ++K +GATI++S SK +RV L+ GT E A
Sbjct: 120 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 179
Query: 613 AENLI 617
A + I
Sbjct: 180 AHSFI 184
Score = 42.4 bits (98), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 5/66 (7%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDS----KSSRGDRVALISGTPEQKR 611
+E+ VP N VG ++GK G L ++++GA I++S +R RV I+G+P +
Sbjct: 477 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVT-ITGSPAATQ 535
Query: 612 AAENLI 617
AA+ LI
Sbjct: 536 AAQYLI 541
>gi|409083451|gb|EKM83808.1| hypothetical protein AGABI1DRAFT_117279 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 340
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 140/331 (42%), Gaps = 57/331 (17%)
Query: 306 EELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDD 365
+ L +R L G +IGK G + +R+ +G + V E V+TV+ S D
Sbjct: 23 DSLTLRALVSTKDAGVIIGKAGKNVADLREQTGVKAGVSKVIPGVHERVLTVSG--SVDA 80
Query: 366 IKSMAVEAVLLLQTK------INDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
+ + L T ++ +IRLL+S ++G IIG++G I I+ +
Sbjct: 81 VAKAYTLIITQLVTASPASPVVSSPSTVHTSIRLLISHNLMGTIIGRNGLKIKAIQDNSG 140
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGAD 479
A + SK P+ + + +VEV G ++ A+ +I L +D
Sbjct: 141 ARMVASKEMLPQ---STERIVEVQGAPEAIGRAVEEIGKCLLED---------------- 181
Query: 480 HIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGD------ 533
+ G G + P D R+ G S+S YG + GD
Sbjct: 182 --WERGLGTVL---------FHPGTVDDRSGGNRRQGSYSASPQYGAQRRANGDGNVRAR 230
Query: 534 -SPYGS--MSSYSSKLYGGLPPPLTLE---VLVPANAVGKVIGKAGSNLANIRKISGATI 587
SP S S SS+ PP L + +P++ VG +IG++G+ + IR++SG+ I
Sbjct: 231 ASPPASPTHSPISSQ------PPANLRTQNISIPSDMVGCIIGRSGTKITEIRRLSGSKI 284
Query: 588 EMSDS-KSSRGDRVALISGTPEQKRAAENLI 617
++ + G+R+ I GTPE A L+
Sbjct: 285 SIAKAPHDETGERMFTIVGTPEANEKALFLL 315
>gi|124359391|gb|ABN05855.1| KH, type 1 [Medicago truncatula]
Length = 222
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 85/175 (48%), Gaps = 23/175 (13%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDD- 365
+ R+LC ++IG VIGK G IK+++ +GA+I ++D+ + + VI V + D
Sbjct: 47 HVAFRLLCNSSRIGGVIGKSGTVIKNLQLTTGAKIRIEDSPNESPDRVIMVIGASNIDGK 106
Query: 366 --IKSM-----------AVEAVL-----LLQTKINDED----DDTVTIRLLVSSKVIGCI 403
++S A EA+L +L+ E D TV+ RL+ S G +
Sbjct: 107 VMVRSHSGDGEAIEVSKAQEALLRVFDRILEVAAEMEGIELGDRTVSCRLVADSAQAGSV 166
Query: 404 IGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIIL 458
IGK G ++ +I+K T + + K + P C + DE++E A+ +I+
Sbjct: 167 IGKGGKVVEKIKKDTGCKIWVCKDNLPACISSPDEVIECSASRSMFGSAVTRIVF 221
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 74/152 (48%), Gaps = 23/152 (15%)
Query: 37 VIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRV------------V 84
V +R+LC IG VIGKSG VI +++ T A++++ D + DRV V
Sbjct: 48 VAFRLLCNSSRIGGVIGKSGTVIKNLQLTTGAKIRIEDSPNESPDRVIMVIGASNIDGKV 107
Query: 85 TIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQI 144
+ SH D E +EV AQ+ALL+V I VA + + C++
Sbjct: 108 MVRSHSGDGEAIEVSK----------AQEALLRVFDRILE-VAAEMEGIELGDRTVSCRL 156
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVT 176
+ S+Q+ ++IGK G +++++ T I V
Sbjct: 157 VADSAQAGSVIGKGGKVVEKIKKDTGCKIWVC 188
>gi|390604812|gb|EIN14203.1| hypothetical protein PUNSTDRAFT_95868 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 330
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 137/319 (42%), Gaps = 46/319 (14%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI- 366
L +R L G +IGKGG + +R +G + V + V+T++ S D +
Sbjct: 28 LTLRALVSTKDAGVIIGKGGKNVADLRDQTGVKAGVSKVVPGVHDRVLTISG--SVDRVA 85
Query: 367 KSMAVEAVLLLQTK----INDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADV 422
K+ + L+ + I+ ++RLL+S ++G IIG+ G+ I I+ + A +
Sbjct: 86 KAYGLIVAQLVASNPTSPISASSSTHTSLRLLISHNLMGTIIGRGGTRIKAIQDNSGARM 145
Query: 423 RISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIY 482
SK P+ + + +VEV G V ++ A+ I L +D +
Sbjct: 146 VASKDMLPQ---STERVVEVHGSVEAIERAVDDIGKSLLED------------------W 184
Query: 483 SSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSY 542
G G + P D+R SG S + YG + GS S
Sbjct: 185 ERGLGTVL---------FHPGAGDER----SGSSRRYSENRGSYGGSRQSNGRPGSPGSP 231
Query: 543 SSKLYGGLPPPLTLE---VLVPANAVGKVIGKAGSNLANIRKISGATIEMSDS-KSSRGD 598
S + P P L + +P++ VG +IG+ GS + IR++SG+ I ++ + G+
Sbjct: 232 SRQAPSS-PQPTNLRTQNISIPSDMVGCIIGRGGSKITEIRRLSGSKISIAKAPHDETGE 290
Query: 599 RVALISGTPEQKRAAENLI 617
R+ I GTPE A L+
Sbjct: 291 RMFTIVGTPEANEKALFLL 309
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 39/74 (52%)
Query: 551 PPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQK 610
P LTL LV G +IGK G N+A++R +G +S DRV ISG+ ++
Sbjct: 25 PDTLTLRALVSTKDAGVIIGKGGKNVADLRDQTGVKAGVSKVVPGVHDRVLTISGSVDRV 84
Query: 611 RAAENLIQAFIMAT 624
A LI A ++A+
Sbjct: 85 AKAYGLIVAQLVAS 98
>gi|9931476|gb|AAG02185.1| RNA binding protein MCG10 [Homo sapiens]
gi|119585575|gb|EAW65171.1| poly(rC) binding protein 4, isoform CRA_d [Homo sapiens]
gi|119585578|gb|EAW65174.1| poly(rC) binding protein 4, isoform CRA_d [Homo sapiens]
gi|119585579|gb|EAW65175.1| poly(rC) binding protein 4, isoform CRA_d [Homo sapiens]
Length = 369
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 114/236 (48%), Gaps = 31/236 (13%)
Query: 389 VTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGS 448
VT+RL++ + G +IGK+G+ I EIR+ T A V+++ P ++ + V V G
Sbjct: 68 VTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLP---NSTERAVTVSG---- 120
Query: 449 VRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQR 508
V DA++ + ++ L+ +PP GA Y +S+ +L L +Q
Sbjct: 121 VPDAIILCVRQICAVILE------SPPKGATIPYHPS--LSLGTVL--------LSANQG 164
Query: 509 ADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPL---TLEVLVPANAV 565
G ++ + + LS P+ + S + GL P + E LVP + +
Sbjct: 165 FSVQGQYGAVTPAEVTKLQQLSSHAVPFATPS-----VVPGLDPGTQTSSQEFLVPNDLI 219
Query: 566 GKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFI 621
G VIG+ GS ++ IR++SGA I++ + G+R I+G+P A+ LI A +
Sbjct: 220 GCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYLITACL 275
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 89/222 (40%), Gaps = 65/222 (29%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDV-DDTKDNRDECVITVTAI------ 360
+ +R++ P ++ G +IGK G IK IR+ +GAQ+ V D N E +TV+ +
Sbjct: 68 VTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIIL 127
Query: 361 ----------ESPDD------IKSMAVEAVLLLQ------------------TKIN---- 382
ESP S+++ VLL TK+
Sbjct: 128 CVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSS 187
Query: 383 --------------DEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGD 428
D T + LV + +IGC+IG+ GS I+EIR+ + A ++I
Sbjct: 188 HAVPFATPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGN-- 245
Query: 429 KPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDG 470
+ A + V + G S+ AL Q ++ + K G
Sbjct: 246 --QAEGAGERHVTITGSPVSI--ALAQYLITACLETAKSTSG 283
Score = 45.8 bits (107), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Query: 552 PPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMS-DSKSSRGDRVALISGTPE 608
PP+TL +++PA+ G +IGKAG+ + IR+ +GA ++++ D + +R +SG P+
Sbjct: 66 PPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPD 123
Score = 45.8 bits (107), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 98/234 (41%), Gaps = 64/234 (27%)
Query: 143 QILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESE 202
++++P+SQ ++IGKAG IK +R T ++V T + V +SG +
Sbjct: 71 RLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNST-------ERAVTVSGVPD 123
Query: 203 AVKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSR 262
A+ + I A++ + P+ + +P +P S
Sbjct: 124 AIILCVRQICAVILESPPKG------------------ATIPYHP-------------SL 152
Query: 263 SVPSILGAARVPDLQGYA---DTGNTWPVYSTGL-------------SLVSGLVGASQ-- 304
S+ ++L +A QG++ G P T L S+V GL +Q
Sbjct: 153 SLGTVLLSAN----QGFSVQGQYGAVTPAEVTKLQQLSSHAVPFATPSVVPGLDPGTQTS 208
Query: 305 SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
S+E ++ P + IG VIG+ G I IRQ SGA I + + + E +T+T
Sbjct: 209 SQEFLV----PNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTIT 258
Score = 38.9 bits (89), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 37 VIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTI 86
V R++ P GS+IGK+G I IR+ T A+V+V D P + +R VT+
Sbjct: 68 VTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTV 118
>gi|432116592|gb|ELK37385.1| Far upstream element-binding protein 3 [Myotis davidii]
Length = 651
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 137/348 (39%), Gaps = 56/348 (16%)
Query: 315 PFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDE--CVITVT--AIESPDDIKSMA 370
P +G +IG+GG I I+ SG +I + E CV+T T +IE +
Sbjct: 85 PDKMVGFIIGRGGEQISRIQTESGCKIQIASESSGIPERPCVLTGTPESIEQAKRLLGQI 144
Query: 371 VEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKAD-VRISKGDK 429
V+ ND D ++ +L+ + +G +IGK G I ++++RT V I G
Sbjct: 145 VDRCRNGPGFHNDIDGNSTIQEILIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPL 204
Query: 430 PKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSGTG-- 487
P AD + + + G+ V+ A ++ +R+ D G V D G G
Sbjct: 205 PTGAD---KPLRITGDPFKVQQAREMVLEIIREKDQADFRG-----VRGDFASRMGGGSI 256
Query: 488 -ISMPPLLPSI----------------------------------PPVGPLGYDQRADSG 512
+S+P I +GP Q A
Sbjct: 257 EVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPERAAQVMGPPDRCQHAAHV 316
Query: 513 SGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKA 572
+L++ G+G L++ +S GG+ + VPA+ G VIGK
Sbjct: 317 INELILTAQERDGFGGLAVARGRGRGRGDWSMGTPGGI---QEITYTVPADKCGLVIGKG 373
Query: 573 GSNLANIRKISGATIEMSDSKSSRGD---RVALISGTPEQKRAAENLI 617
G N+ +I + SGA +E+ + D R+ I G P+Q A +LI
Sbjct: 374 GENIKSINQQSGAHVELQRNPPPNTDPNLRIFTIRGIPQQIEVARHLI 421
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%)
Query: 554 LTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAA 613
+T E VP VG +IG+ G ++ I+ SG I+++ S +R +++GTPE A
Sbjct: 78 ITEEFKVPDKMVGFIIGRGGEQISRIQTESGCKIQIASESSGIPERPCVLTGTPESIEQA 137
Query: 614 ENLI 617
+ L+
Sbjct: 138 KRLL 141
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 75/164 (45%), Gaps = 24/164 (14%)
Query: 44 PDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFN 103
PD ++G +IG+ G+ I+ I+ E+ ++++ G +R + E +E
Sbjct: 85 PDKMVGFIIGRGGEQISRIQTESGCKIQIASESSGIPERPCVL---TGTPESIE------ 135
Query: 104 DKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIK 163
A+ L ++ N D D +E IL+P+S+ +IGK G TIK
Sbjct: 136 ------QAKRLLGQIVDRCRNGPGFHNDIDGNSTIQE---ILIPASKVGLVIGKGGETIK 186
Query: 164 RLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKA 207
+L+ +T + V +D PT + D + I+G+ V++A
Sbjct: 187 QLQERTGVKM-VMIQDGPLPTGA-----DKPLRITGDPFKVQQA 224
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 537 GSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSR 596
G ++S++ GG ++EV VP AVG VIG+ G + I+ +G I+
Sbjct: 242 GVRGDFASRMGGG-----SIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGIS 296
Query: 597 GDRVALISGTPEQKRAAENLIQAFIM 622
+R A + G P++ + A ++I I+
Sbjct: 297 PERAAQVMGPPDRCQHAAHVINELIL 322
>gi|66472276|ref|NP_001018567.1| poly(rC) binding protein 3 [Danio rerio]
gi|63101380|gb|AAH95089.1| Poly(rC) binding protein 3 [Danio rerio]
gi|182890686|gb|AAI65090.1| Pcbp3 protein [Danio rerio]
Length = 241
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 93/187 (49%), Gaps = 17/187 (9%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDD-- 365
L IR+L ++G +IGK G T+K +R+ SGA+I++ + N E ++T+T P D
Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG---PTDAI 70
Query: 366 IKSMAVEAVLLLQTKINDEDDD------TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
K+ A+ A + IN + VT+RL+V + G +IGK GS I E+R+ T
Sbjct: 71 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTG 130
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNP-PVGA 478
A V+++ P ++ + V + G ++ + QI + + + K P P
Sbjct: 131 AQVQVAGDMLP---NSTERAVTISGTPEAIIQCVKQICVVMLESPPKGATIPYRPKPAST 187
Query: 479 DHIYSSG 485
I+S G
Sbjct: 188 PVIFSGG 194
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 105/247 (42%), Gaps = 48/247 (19%)
Query: 28 KDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIY 87
+ E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R+VTI
Sbjct: 7 QSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTI- 63
Query: 88 SHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIA-----NAVANATDNDKKRKEKEEC 142
DA+ K A IA + + + +++ K
Sbjct: 64 ---------------------TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTL 102
Query: 143 QILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESE 202
+++VP+SQ ++IGK G+ IK +R T ++V T + V ISG E
Sbjct: 103 RLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVAGDMLPNST-------ERAVTISGTPE 155
Query: 203 AVKKALFAISAIMYKFSPR-EDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPS 261
A+ + + I +M + P+ IP P+ P+ GG ADP+ S
Sbjct: 156 AIIQCVKQICVVMLESPPKGATIPYRPK----------PASTPVIFSGGQV-RADPLAAS 204
Query: 262 RSVPSIL 268
+ S+L
Sbjct: 205 AANLSLL 211
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+TIRLL+ K +G IIGK G + ++R+ + A + IS+G+ P + +V + G
Sbjct: 15 TLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCP------ERIVTITGPTD 68
Query: 448 SVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
++ A I + +D ++ + + PPV
Sbjct: 69 AIFKAFAMIAYKFEEDIINSMSNSPATSKPPV 100
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Query: 552 PPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMS-DSKSSRGDRVALISGTPE 608
PP+TL ++VPA+ G +IGK GS + +R+ +GA ++++ D + +R ISGTPE
Sbjct: 98 PPVTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVAGDMLPNSTERAVTISGTPE 155
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 40/66 (60%), Gaps = 3/66 (4%)
Query: 302 ASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDV-DDTKDNRDECVITVTAI 360
A+ + +R++ P ++ G +IGKGG IK +R+++GAQ+ V D N E +T++
Sbjct: 94 ATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVAGDMLPNSTERAVTISG- 152
Query: 361 ESPDDI 366
+P+ I
Sbjct: 153 -TPEAI 157
>gi|26353480|dbj|BAC40370.1| unnamed protein product [Mus musculus]
Length = 579
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/325 (19%), Positives = 149/325 (45%), Gaps = 45/325 (13%)
Query: 298 GLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITV 357
G V + +L +R+L P +G +IGK G TI++I + + ++IDV K+N ++
Sbjct: 186 GSVSKQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVH-RKENTGAAEKSI 244
Query: 358 TAIESPDDIKSMAVEAVLLLQTKIND-EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
T + +P+ + + ++ + D + + + +++L + +G +IGK G + +I +
Sbjct: 245 TILSTPEGTSAACKSILEIMHKEAQDIKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQ 304
Query: 417 RTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPV 476
T + IS + + + + V G V + A +I+ ++R+ D +
Sbjct: 305 DTDTKITISPLQELTLYNP-ERTITVKGSVETCAKAEEEIMKKIRESYEND--------I 355
Query: 477 GADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDS-- 534
+ ++ ++ L+P + + + +G+ +S + +
Sbjct: 356 ASMNLQAN--------LIPGL-------------NLNALGLFPPTSGMPPPTSGPPSTLT 394
Query: 535 -PYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSK 593
PY ++ T+ + +PA +VG +IGK G ++ + + +GA+I+++ ++
Sbjct: 395 PPYPQFEQSETE---------TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAE 445
Query: 594 SSRGD-RVALISGTPEQKRAAENLI 617
+ R+ +I+G PE + A+ I
Sbjct: 446 APDAKVRMVIITGPPEAQFKAQGRI 470
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 95/442 (21%), Positives = 177/442 (40%), Gaps = 85/442 (19%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKEDVEV 98
R+L P +G++IGK G I +I ++T++++ V GA ++ +TI S
Sbjct: 199 RLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENTGAAEKSITILS---------- 248
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
E AA ++L++ A D K E+ +IL ++ +IGK
Sbjct: 249 -----TPEGTSAACKSILEIMHKEAQ--------DIKFTEEIPLKILAHNNFVGRLIGKE 295
Query: 159 GATIKRLRSKTRTSIKVTPKDASEPTHSCAM-EFDNFVLISGESEAVKKALFAISAIMYK 217
G +K++ T T I ++ P + + + + G E KA IM K
Sbjct: 296 GRNLKKIEQDTDTKITIS------PLQELTLYNPERTITVKGSVETCAKAE---EEIMKK 346
Query: 218 FSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQ 277
+RE+ + I ++ GL NA + P S + L
Sbjct: 347 ------------IRESYENDIASMNLQANLIPGLNLNALGLFPPTSGMPPPTSGPPSTLT 394
Query: 278 GYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQAS 337
+P + QSE + + P +G +IGK G IK + + +
Sbjct: 395 P------PYPQFE-------------QSETETVHLFIPALSVGAIIGKQGQHIKQLSRFA 435
Query: 338 GAQIDV--DDTKDNRDECVITVTAIESPDDIKSMA---VEAVLLLQTKINDEDDDTVTIR 392
GA I + + D + VI I P + + A + + + ++ +++ +
Sbjct: 436 GASIKIAPAEAPDAKVRMVI----ITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAH 491
Query: 393 LLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDE-LVEVVGEVGS--- 448
+ V S G +IGK G +NE++ + A+V + + P D ND+ +V++ G +
Sbjct: 492 IRVPSFAAGRVIGKGGKTVNELQSLSSAEVVVPRDQTP---DENDQVVVKITGHFYACQV 548
Query: 449 ----VRDALVQIILRLRDDALK 466
+++ L Q+ + AL+
Sbjct: 549 AQRKIQEILTQVKQHQQQKALQ 570
>gi|392344006|ref|XP_002728759.2| PREDICTED: RNA-binding protein Nova-2 [Rattus norvegicus]
Length = 576
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 85/174 (48%), Gaps = 19/174 (10%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD-----NRDECVI--TVTA 359
E ++VL P G +IGKGG TI +++ +GA I + +KD C++ T A
Sbjct: 116 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEA 175
Query: 360 IESPDDIKSMAV----------EAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGS 409
+ + + V E V +LQ + D +L+V + G IIGK G+
Sbjct: 176 LNAAHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGA 235
Query: 410 IINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDD 463
+ + +++ A V++S+ KP+ + + +V V GE V A+ I+ ++++D
Sbjct: 236 TVKAVMEQSGAWVQLSQ--KPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQED 287
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 88/184 (47%), Gaps = 17/184 (9%)
Query: 31 KGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV---DPFPGAKDRVVTIY 87
G E ++L P GS+IGK G+ I +++ET A +K+ D +PG +RV +
Sbjct: 111 HGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQ 170
Query: 88 SHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVP 147
E + F E + A+ K + N + T + R ++ +++VP
Sbjct: 171 G---TAEALNAAHSF-IAEKVREIPQAMTKPE--VVNILQPQTTMNPDR--AKQAKLIVP 222
Query: 148 SSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKA 207
+S + IIGK GAT+K + ++ ++++ K ++ + V +SGE E V KA
Sbjct: 223 NSTAGLIIGKGGATVKAVMEQSGAWVQLSQKP-----EGINLQ-ERVVTVSGEPEQVHKA 276
Query: 208 LFAI 211
+ AI
Sbjct: 277 VSAI 280
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSK---SSRGDRVALISGTPEQKRA 612
L+VL+P+ A G +IGK G + ++K +GATI++S SK +RV L+ GT E A
Sbjct: 119 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 178
Query: 613 AENLI 617
A + I
Sbjct: 179 AHSFI 183
Score = 42.4 bits (98), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 5/66 (7%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDS----KSSRGDRVALISGTPEQKR 611
+E+ VP N VG ++GK G L ++++GA I++S +R RV I+G+P +
Sbjct: 493 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVT-ITGSPAATQ 551
Query: 612 AAENLI 617
AA+ LI
Sbjct: 552 AAQYLI 557
>gi|291234615|ref|XP_002737239.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 1-like
[Saccoglossus kowalevskii]
Length = 655
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 139/320 (43%), Gaps = 31/320 (9%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
+L +R+L P + +G +IGK G I+ I Q + A++D+ +K+N + +P
Sbjct: 227 DLPVRLLVPSSMVGAIIGKKGANIRLITQQTKAKVDILRSKENASALEKAINIYGTPLQC 286
Query: 367 KSMAVEAVLLLQTKINDEDDDTVTI--RLLVSSKVIGCIIGKSGSIINEIRKRTKADVRI 424
S VE ++ K N+ + ++ I +LL + ++G +IGK G+ +N+I + + V I
Sbjct: 287 -SNTVEQIMETMVKENESANPSIEIPLKLLAHNSLVGRLIGKGGTTLNKIMEESNTKVSI 345
Query: 425 SKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSS 484
S + + + + + G + A + +LRD D + S
Sbjct: 346 SNLQELTIYNM-ERTITIKGSLNDECKAEEMVSEKLRDSFRAD-------------MASL 391
Query: 485 GTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSS 544
++ P L LG A + M +S+ LY +G ++Y+
Sbjct: 392 TQQYNLFPGLNHASVFSGLGNSPGAI--FNVAMHNSAVLYAI---------FGP-AAYTV 439
Query: 545 KLYGGLPPPLTLEVL-VPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRG-DRVAL 602
+ L PP + L +P +AVG +IG G + I + S A + + +S +R
Sbjct: 440 NTHHLLQPPSEITYLFIPISAVGAIIGVKGQEIREISQKSSAKVRVEPPRSEDDEERAVY 499
Query: 603 ISGTPEQKRAAENLIQAFIM 622
I G P+ + A+ I I+
Sbjct: 500 IEGYPDAQWIAQWFIYHKIL 519
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 98/436 (22%), Positives = 172/436 (39%), Gaps = 81/436 (18%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAK--DRVVTIYSHVKDKEDVE 97
R+L P ++G++IGK G I I Q+T+A+V ++ A ++ + IY
Sbjct: 231 RLLVPSSMVGAIIGKKGANIRLITQQTKAKVDILRSKENASALEKAINIYG--------- 281
Query: 98 VDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVP------SSQS 151
PL +N V + K E I +P +S
Sbjct: 282 --------TPL------------QCSNTVEQIMETMVKENESANPSIEIPLKLLAHNSLV 321
Query: 152 ANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAI 211
+IGK G T+ ++ ++ T KV+ + E T + + I G KA +
Sbjct: 322 GRLIGKGGTTLNKIMEESNT--KVSISNLQELT---IYNMERTITIKGSLNDECKAEEMV 376
Query: 212 SAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYP-----PGGLYPNADPILPSRSVPS 266
S + + S R D+ T P + + ++ PG ++ A + S + +
Sbjct: 377 SEKL-RDSFRADMASLTQQYNLFPGL---NHASVFSGLGNSPGAIFNVA--MHNSAVLYA 430
Query: 267 ILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKG 326
I G A A T NT + Q + + P + +G +IG
Sbjct: 431 IFGPA--------AYTVNTHHLL--------------QPPSEITYLFIPISAVGAIIGVK 468
Query: 327 GGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVL--LLQTKINDE 384
G I+ I Q S A++ V+ + DE IE D + +A + +L + +
Sbjct: 469 GQEIREISQKSSAKVRVEPPRSEDDEE--RAVYIEGYPDAQWIAQWFIYHKILTDVCSGK 526
Query: 385 DDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVG 444
+ + ++V + ++G IIGK GS I ++ T A++ + K KP D N+ +V + G
Sbjct: 527 GEVRLISEIMVPANMVGRIIGKRGSAIQDLELLTGAEIDVPKNIKPN--DKNEVVVRIKG 584
Query: 445 EVGSVRDALVQIILRL 460
+ + A QI L
Sbjct: 585 HFFASQSAQRQIRFML 600
>gi|281348784|gb|EFB24368.1| hypothetical protein PANDA_018514 [Ailuropoda melanoleuca]
Length = 346
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 86/175 (49%), Gaps = 21/175 (12%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD-----NRDECVITVTAIE 361
E ++VL P G +IGKGG TI +++ +GA I + +KD C++ TA E
Sbjct: 32 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTA-E 90
Query: 362 SPDDIKSMAVEAVL-------------LLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSG 408
+ + + S E V +LQ + D +L+V + G IIGK G
Sbjct: 91 ALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGG 150
Query: 409 SIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDD 463
+ + + +++ A V++S+ KP+ + + +V V GE V A+ I+ ++++D
Sbjct: 151 ATVKAVMEQSGAWVQLSQ--KPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQED 203
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 143/325 (44%), Gaps = 55/325 (16%)
Query: 26 NEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV---DPFPGAKDR 82
++ G E ++L P GS+IGK G+ I +++ET A +K+ D +PG +R
Sbjct: 22 TKRSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTER 81
Query: 83 VVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEEC 142
V + E + F E + A+ K + N + T + R ++
Sbjct: 82 VCLVQG---TAEALNAVHSF-IAEKVREIPQAMTKPE--VVNILQPQTTMNPDR--AKQA 133
Query: 143 QILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESE 202
+++VP+S + IIGK GAT+K + ++ ++++ K ++ + V +SGE E
Sbjct: 134 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKP-----EGINLQ-ERVVTVSGEPE 187
Query: 203 AVKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPN-ADPILPS 261
V K A+SAI+ K V+E P S S + I Y N A P+ S
Sbjct: 188 QVHK---AVSAIVQK------------VQEDPQS---SSCLNIS-----YANVAGPVANS 224
Query: 262 RSVPSILGAARVPDLQGYADTGNTWPVYSTGLS--LVSGLVGASQSEELVIRVLCPFNKI 319
P YA + P + L + + A ++ELV + P N +
Sbjct: 225 N-----------PTGSPYASPADVLPAAAGAAGGFLTAEKLAAESAKELV-EIAVPENLV 272
Query: 320 GRVIGKGGGTIKSIRQASGAQIDVD 344
G ++GKGG T+ ++ +GA+I +
Sbjct: 273 GAILGKGGKTLVEYQELTGARIQIS 297
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 42/69 (60%), Gaps = 7/69 (10%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSK---SSRGDRVALISGTPEQKRA 612
L+VL+P+ A G +IGK G + ++K +GATI++S SK +RV L+ GT E
Sbjct: 35 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAE---- 90
Query: 613 AENLIQAFI 621
A N + +FI
Sbjct: 91 ALNAVHSFI 99
Score = 42.4 bits (98), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 5/66 (7%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDS----KSSRGDRVALISGTPEQKR 611
+E+ VP N VG ++GK G L ++++GA I++S +R RV I+G+P +
Sbjct: 263 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVT-ITGSPAATQ 321
Query: 612 AAENLI 617
AA+ LI
Sbjct: 322 AAQYLI 327
Score = 38.9 bits (89), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 69/334 (20%), Positives = 120/334 (35%), Gaps = 121/334 (36%)
Query: 143 QILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESE 202
++L+PS + +IIGK G TI +L+ +T +IK++ P + + L+ G +E
Sbjct: 36 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTT-----ERVCLVQGTAE 90
Query: 203 AVKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSR 262
AL A+ + + + VRE P ++ P V I L P + P R
Sbjct: 91 ----ALNAVHSFIAE-----------KVREIPQAMTKPEVVNI-----LQPQTT-MNPDR 129
Query: 263 SVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRV 322
A Q+ +++ P + G +
Sbjct: 130 ---------------------------------------AKQA-----KLIVPNSTAGLI 145
Query: 323 IGKGGGTIKSIRQASGAQIDVDDTKD--NRDECVITVTA--------------------- 359
IGKGG T+K++ + SGA + + + N E V+TV+
Sbjct: 146 IGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQ 205
Query: 360 -------------------------IESPDDI--KSMAVEAVLLLQTKINDEDDDTVTIR 392
SP D+ + L K+ E + +
Sbjct: 206 SSSCLNISYANVAGPVANSNPTGSPYASPADVLPAAAGAAGGFLTAEKLAAESAKEL-VE 264
Query: 393 LLVSSKVIGCIIGKSGSIINEIRKRTKADVRISK 426
+ V ++G I+GK G + E ++ T A ++ISK
Sbjct: 265 IAVPENLVGAILGKGGKTLVEYQELTGARIQISK 298
>gi|326930374|ref|XP_003211322.1| PREDICTED: far upstream element-binding protein 3-like [Meleagris
gallopavo]
Length = 554
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 145/350 (41%), Gaps = 60/350 (17%)
Query: 315 PFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDE--CVITVT--AIESPDDIKSMA 370
P +G +IG+GG I I+ SG +I + E CV+T T +IE +
Sbjct: 71 PDKMVGFIIGRGGEQISRIQIESGCKIQIAPDSGGMPERPCVLTGTPESIEQAKRLLGQI 130
Query: 371 VEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKAD-VRISKGDK 429
V+ ND D ++ +L+ + +G +IGK G I ++++RT + I G
Sbjct: 131 VDRCRNGPGFHNDVDGNSTIQEILIPASKVGLVIGKGGETIKQLQERTGVKMIMIQDGPM 190
Query: 430 PKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSGTG-- 487
P AD + + + G+ V+ A ++ +R+ KD+ R G + +SS G
Sbjct: 191 PTGAD---KPLRITGDAFKVQQAREMVLEIIRE---KDQADFR----GVRNDFSSRMGGG 240
Query: 488 ---ISMPPLLPSI-------------------------PPVGP------LGYDQRADSGS 513
+S+P I + P +G R +
Sbjct: 241 SIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPERVAQVMGLPDRCQHAA 300
Query: 514 GI---GMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIG 570
I +L++ G+GSL++ +S GG+ + VPA+ G VIG
Sbjct: 301 HIISELILTAQERDGFGSLAVARGRGRGRGDWSVGTPGGM---QEITYTVPADKCGLVIG 357
Query: 571 KAGSNLANIRKISGATIEMSDS---KSSRGDRVALISGTPEQKRAAENLI 617
K G N+ +I + SGA +E+ + + G R+ I G P+Q A +LI
Sbjct: 358 KGGENIKSINQQSGAHVELQRNPPPNTDPGVRIFTIRGVPQQIELARHLI 407
Score = 43.1 bits (100), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 537 GSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSR 596
G + +SS++ GG ++EV VP AVG VIG+ G + I+ +G I+
Sbjct: 228 GVRNDFSSRMGGG-----SIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGIS 282
Query: 597 GDRVALISGTPEQKRAAENLIQAFIM 622
+RVA + G P++ + A ++I I+
Sbjct: 283 PERVAQVMGLPDRCQHAAHIISELIL 308
Score = 38.9 bits (89), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 12/104 (11%)
Query: 518 LSSSSLYGYG----SLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAG 573
L S+YGYG L G + G++ + + T + VP VG +IG+ G
Sbjct: 32 LVDPSVYGYGVQKRPLDDGGNQLGALVHQRAVI--------TEDFKVPDKMVGFIIGRGG 83
Query: 574 SNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLI 617
++ I+ SG I+++ +R +++GTPE A+ L+
Sbjct: 84 EQISRIQIESGCKIQIAPDSGGMPERPCVLTGTPESIEQAKRLL 127
Score = 38.9 bits (89), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 66/160 (41%), Gaps = 20/160 (12%)
Query: 27 EKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVD--PFPGAKDRVV 84
D GN S I IL P +G VIGK G+ I +++ T ++ ++ P P D+ +
Sbjct: 141 HNDVDGN--STIQEILIPASKVGLVIGKGGETIKQLQERTGVKMIMIQDGPMPTGADKPL 198
Query: 85 TIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDND-KKRKEKEECQ 143
I D F ++ A++ +L++ A ND R +
Sbjct: 199 RI-----------TGDAFKVQQ----AREMVLEIIREKDQADFRGVRNDFSSRMGGGSIE 243
Query: 144 ILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEP 183
+ VP +IG+ G IK++++ I+ P D P
Sbjct: 244 VSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISP 283
>gi|225543383|ref|NP_076159.3| insulin-like growth factor 2 mRNA-binding protein 3 [Mus musculus]
gi|81916748|sp|Q9CPN8.1|IF2B3_MOUSE RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 3;
Short=IGF2 mRNA-binding protein 3; Short=IMP-3;
Short=mIMP-3; AltName: Full=IGF-II mRNA-binding protein
3; AltName: Full=VICKZ family member 3
gi|11933384|dbj|BAB19755.1| igf2 mRNA-binding protein 3 [Mus musculus]
gi|12847973|dbj|BAB27779.1| unnamed protein product [Mus musculus]
gi|28175449|gb|AAH45138.1| Insulin-like growth factor 2 mRNA binding protein 3 [Mus musculus]
gi|29145081|gb|AAH49082.1| Insulin-like growth factor 2 mRNA binding protein 3 [Mus musculus]
gi|148666183|gb|EDK98599.1| insulin-like growth factor 2 mRNA binding protein 3, isoform CRA_b
[Mus musculus]
Length = 579
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 64/325 (19%), Positives = 148/325 (45%), Gaps = 45/325 (13%)
Query: 298 GLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITV 357
G V + +L +R+L P +G +IGK G TI++I + + ++IDV K+N ++
Sbjct: 186 GSVSKQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVH-RKENTGAAEKSI 244
Query: 358 TAIESPDDIKSMAVEAVLLLQTKIND-EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
T + +P+ + + ++ + D + + + +++L + +G +IGK G + +I +
Sbjct: 245 TILSTPEGTSAACKSILEIMHKEAQDIKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQ 304
Query: 417 RTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPV 476
T + IS + + + + V G V + A +I+ ++R+ D +
Sbjct: 305 DTDTKITISPLQELTLYNP-ERTITVKGSVETCAKAEEEIMKKIRESYEND--------I 355
Query: 477 GADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDS-- 534
+ ++ + L+P + + + +G+ +S + +
Sbjct: 356 ASMNLQAH--------LIPGL-------------NLNALGLFPPTSGMPPPTSGPPSTLT 394
Query: 535 -PYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSK 593
PY ++ T+ + +PA +VG +IGK G ++ + + +GA+I+++ ++
Sbjct: 395 PPYPQFEQSETE---------TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAE 445
Query: 594 SSRGD-RVALISGTPEQKRAAENLI 617
+ R+ +I+G PE + A+ I
Sbjct: 446 APDAKVRMVIITGPPEAQFKAQGRI 470
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 94/441 (21%), Positives = 177/441 (40%), Gaps = 83/441 (18%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKEDVEV 98
R+L P +G++IGK G I +I ++T++++ V GA ++ +TI S
Sbjct: 199 RLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENTGAAEKSITILS---------- 248
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
E AA ++L++ + D K E+ +IL ++ +IGK
Sbjct: 249 -----TPEGTSAACKSILEI--------MHKEAQDIKFTEEIPLKILAHNNFVGRLIGKE 295
Query: 159 GATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKF 218
G +K++ T T I ++P + + + G E KA IM K
Sbjct: 296 GRNLKKIEQDTDTKITISPLQ-----ELTLYNPERTITVKGSVETCAKAE---EEIMKK- 346
Query: 219 SPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQG 278
+RE+ + I ++ + GL NA + P S + L
Sbjct: 347 -----------IRESYENDIASMNLQAHLIPGLNLNALGLFPPTSGMPPPTSGPPSTL-- 393
Query: 279 YADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASG 338
+P + QSE + + P +G +IGK G IK + + +G
Sbjct: 394 ----TPPYPQFE-------------QSETETVHLFIPALSVGAIIGKQGQHIKQLSRFAG 436
Query: 339 AQIDV--DDTKDNRDECVITVTAIESPDDIKSMA---VEAVLLLQTKINDEDDDTVTIRL 393
A I + + D + VI I P + + A + + + ++ +++ + +
Sbjct: 437 ASIKIAPAEAPDAKVRMVI----ITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHI 492
Query: 394 LVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDE-LVEVVGEVGS---- 448
V S G +IGK G +NE++ + A+V + + P D ND+ +V++ G +
Sbjct: 493 RVPSFAAGRVIGKGGKTVNELQSLSSAEVVVPRDQTP---DENDQVVVKITGHFYACQVA 549
Query: 449 ---VRDALVQIILRLRDDALK 466
+++ L Q+ + AL+
Sbjct: 550 QRKIQEILTQVKQHQQQKALQ 570
>gi|301768705|ref|XP_002919771.1| PREDICTED: RNA-binding protein Nova-1-like isoform 2 [Ailuropoda
melanoleuca]
Length = 493
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 90/178 (50%), Gaps = 19/178 (10%)
Query: 303 SQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD-----NRDECVI-- 355
S+ + ++VL P G +IGKGG TI +++ +GA I + +KD C+I
Sbjct: 55 SEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQG 114
Query: 356 TVTAIES-----PDDIKSM-----AVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIG 405
TV A+ + + I+ M E V +LQ + D ++++V + G IIG
Sbjct: 115 TVEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQVKIIVPNSTAGLIIG 174
Query: 406 KSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDD 463
K G+ + I +++ A V++S+ KP + + +V V GE R A+ II ++++D
Sbjct: 175 KGGATVKAIMEQSGAWVQLSQ--KPDGINLQERVVTVSGEPEQNRKAVELIIQKIQED 230
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 81/188 (43%), Gaps = 45/188 (23%)
Query: 38 IYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV---DPFPGAKDRVVTIYSHVKDKE 94
++L P GS+IGK G+ I +++ET A +K+ D +PG +RV I V
Sbjct: 61 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTV---- 116
Query: 95 DVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRK--------------EKE 140
+AL VH IA + N K + +
Sbjct: 117 ------------------EALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIK 158
Query: 141 ECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGE 200
+ +I+VP+S + IIGK GAT+K + ++ ++++ K P E V +SGE
Sbjct: 159 QVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQK----PDGINLQE--RVVTVSGE 212
Query: 201 SEAVKKAL 208
E +KA+
Sbjct: 213 PEQNRKAV 220
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 41/69 (59%), Gaps = 7/69 (10%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS---SRGDRVALISGTPEQKRA 612
L+VL+P+ A G +IGK G + ++K +GATI++S SK +RV LI GT E
Sbjct: 62 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVE---- 117
Query: 613 AENLIQAFI 621
A N + FI
Sbjct: 118 ALNAVHGFI 126
Score = 42.4 bits (98), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS---SRGDRVALISGTPEQKRA 612
+E+ VP N VG ++GK G L ++++GA I++S +R I+GTP +A
Sbjct: 410 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAATQA 469
Query: 613 AENLI 617
A+ LI
Sbjct: 470 AQYLI 474
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS--SRGDRVALISGTPEQKRAA 613
++++VP + G +IGK G+ + I + SGA +++S + +RV +SG PEQ R A
Sbjct: 160 VKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGINLQERVVTVSGEPEQNRKA 219
Query: 614 ENLI 617
LI
Sbjct: 220 VELI 223
>gi|322707130|gb|EFY98709.1| KH domain RNA-binding protein [Metarhizium anisopliae ARSEF 23]
Length = 368
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 146/332 (43%), Gaps = 48/332 (14%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
+L +R + + G +IGKGG + +R +G + V + V+T+T E
Sbjct: 46 QLTLRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTITG-ECDAIS 104
Query: 367 KSMAVEAVLLLQTKIND------EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKA 420
++ A+ A LL+ + + T I+LL+S +G IIG+ G I I+ +
Sbjct: 105 RAYAIVARALLEGAPAMGMGGIVQSNGTHPIKLLISHNQMGTIIGRQGLKIKHIQDVSGV 164
Query: 421 DVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADH 480
+ K P+ + + +VEV G ++ A+ +I L DD
Sbjct: 165 RMVAQKEMLPQ---STERIVEVQGTPDGIQRAVWEICKCLVDD----------------- 204
Query: 481 IYSSGTGISM-PPLLPSIPPVGPLG--YDQ---RADSGSGIGMLSSSSLYGYGSLSMGDS 534
+ GTG + P++ + G LG Y+ R+D GS M + + G + G
Sbjct: 205 -WQRGTGTVLYNPVVRTQAGSGSLGSNYNNGGGRSDYGSPRVMRTGN---GADFSNGGVR 260
Query: 535 PYGSMSSYSSKLYGGLPPPL--------TLEVLVPANAVGKVIGKAGSNLANIRKISGAT 586
P+ S + G PP T + +PA+ VG +IG+AGS ++ IRK SGA
Sbjct: 261 PFSRRSDSDAASRG--PPTHDENGEEIQTQNISIPADMVGCIIGRAGSKISEIRKTSGAR 318
Query: 587 IEMSDS-KSSRGDRVALISGTPEQKRAAENLI 617
I ++ + G+R+ I GT + +A L+
Sbjct: 319 ISIAKAPHDETGERMFTIMGTAKANESALFLL 350
>gi|442634098|ref|NP_001262198.1| mushroom-body expressed, isoform L [Drosophila melanogaster]
gi|440216175|gb|AGB94891.1| mushroom-body expressed, isoform L [Drosophila melanogaster]
Length = 368
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 147/346 (42%), Gaps = 52/346 (15%)
Query: 36 SVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKED 95
++ R++ +GS+IGK G+++N R+E+ A++ + D +R+VT+
Sbjct: 23 TLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDG--SCPERIVTVSGTTN---- 76
Query: 96 VEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANII 155
A A + + D K K + +++VP+SQ ++I
Sbjct: 77 --------------AIFSAFTLITKKFEEWCSQFNDVGKVGKTQIPIRLIVPASQCGSLI 122
Query: 156 GKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIM 215
GK+G+ IK +R T SI+V + T + V +SG +E + + ++ I +M
Sbjct: 123 GKSGSKIKEIRQTTGCSIQVASEMLPNST-------ERAVTLSGSAEQITQCIYQICLVM 175
Query: 216 YKFSPR-EDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVP 274
+ PR IP + P I+ ++ + G Y +P++ V A+
Sbjct: 176 LESPPRGATIPYRPKPQVTGPVIL--ANGQAFTIQGNYA-----VPTQEVAKNPLASLAA 228
Query: 275 DLQGYADTGNTWPVYSTGL----------SLVSGLVGASQSEELVIRVLCPFNKIGRVIG 324
+ +T + TG S + A+++++ + + IG +IG
Sbjct: 229 LGLAGMNPASTGGINHTGSAPAALAALAGSQLRTANPANRAQQQQHEMTVSNDLIGCIIG 288
Query: 325 KGGGTIKSIRQASGAQIDVDDTKD----NRDECVITVTAIESPDDI 366
KGG I IRQ SGA I + + ++ N D T+T +PD +
Sbjct: 289 KGGTKIAEIRQISGAMIRISNCEEREGGNTDR---TITISGNPDSV 331
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 381 INDEDDD-TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDEL 439
I ED T+TIRL++ K +G IIGK G I+N R+ + A + IS G P + +
Sbjct: 15 IKHEDPSVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCP------ERI 68
Query: 440 VEVVGEVGSVRDALVQIILRLRDDALKDRD 469
V V G ++ A I + + + D
Sbjct: 69 VTVSGTTNAIFSAFTLITKKFEEWCSQFND 98
Score = 45.8 bits (107), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 557 EVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRG---DRVALISGTPEQKRAA 613
E+ V + +G +IGK G+ +A IR+ISGA I +S+ + G DR ISG P+ A
Sbjct: 275 EMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALA 334
Query: 614 ENLIQAFI 621
+ LI I
Sbjct: 335 QYLINMRI 342
>gi|74151175|dbj|BAE27710.1| unnamed protein product [Mus musculus]
Length = 579
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 66/325 (20%), Positives = 144/325 (44%), Gaps = 45/325 (13%)
Query: 298 GLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITV 357
G V + +L +R+L P +G +IGK G TI++I + + ++IDV K+N ++
Sbjct: 186 GSVSKQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVH-RKENTGAAEKSI 244
Query: 358 TAIESPDDIKSMAVEAVLLLQTKIND-EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
T + +P+ + + ++ + D + + + +++L + +G +IGK G + +I +
Sbjct: 245 TILSTPEGTSAACKSILEIMHKEAQDIKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQ 304
Query: 417 RTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPV 476
T + IS + + + + V G V + A +I+ ++R+ D
Sbjct: 305 DTDTKITISPLQELTLYNP-ERTITVKGSVETCAKAEEEIMKKIRESYEND--------- 354
Query: 477 GADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDS-- 534
I S + P L + + +G+ +S + +
Sbjct: 355 ----IASMNLQAHLIPGL----------------NLNALGLFPPTSGMPPPTSGPPSTLT 394
Query: 535 -PYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSK 593
PY ++ T+ + +PA +VG +IGK G ++ + + +GA+I+++ ++
Sbjct: 395 PPYPQFEQSETE---------TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAE 445
Query: 594 SSRGD-RVALISGTPEQKRAAENLI 617
+ R+ +I+G PE + A+ I
Sbjct: 446 APDAKVRMVIITGPPEAQFKAQGRI 470
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 94/441 (21%), Positives = 177/441 (40%), Gaps = 83/441 (18%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKEDVEV 98
R+L P +G++IGK G I +I ++T++++ V GA ++ +TI S
Sbjct: 199 RLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENTGAAEKSITILS---------- 248
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
E AA ++L++ + D K E+ +IL ++ +IGK
Sbjct: 249 -----TPEGTSAACKSILEI--------MHKEAQDIKFTEEIPLKILAHNNFVGRLIGKE 295
Query: 159 GATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKF 218
G +K++ T T I ++P + + + G E KA IM K
Sbjct: 296 GRNLKKIEQDTDTKITISPLQ-----ELTLYNPERTITVKGSVETCAKAE---EEIMKK- 346
Query: 219 SPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQG 278
+RE+ + I ++ + GL NA + P S + L
Sbjct: 347 -----------IRESYENDIASMNLQAHLIPGLNLNALGLFPPTSGMPPPTSGPPSTL-- 393
Query: 279 YADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASG 338
+P + QSE + + P +G +IGK G IK + + +G
Sbjct: 394 ----TPPYPQFE-------------QSETETVHLFIPALSVGAIIGKQGQHIKQLSRFAG 436
Query: 339 AQIDV--DDTKDNRDECVITVTAIESPDDIKSMA---VEAVLLLQTKINDEDDDTVTIRL 393
A I + + D + VI I P + + A + + + ++ +++ + +
Sbjct: 437 ASIKIAPAEAPDAKVRMVI----ITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHI 492
Query: 394 LVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDE-LVEVVGEVGS---- 448
V S G +IGK G +NE++ + A+V + + P D ND+ +V++ G +
Sbjct: 493 RVPSFAAGRVIGKGGKTVNELQSLSSAEVVVPRDQTP---DENDQVVVKITGHFYACQVA 549
Query: 449 ---VRDALVQIILRLRDDALK 466
+++ L Q+ + AL+
Sbjct: 550 QRKIQEILTQVKQHQQQKALQ 570
>gi|348578485|ref|XP_003475013.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Cavia
porcellus]
Length = 338
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 138/342 (40%), Gaps = 82/342 (23%)
Query: 305 SEELV-IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTA---- 359
++E+V +R+L G VIGKGG IK++R A + V D+ + E +++++A
Sbjct: 39 TDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDS--SGPERILSISADIET 96
Query: 360 -----------------IESPDDIKSMAVE--AVLLLQTKINDEDDDTVTIRLLVSSKVI 400
+ SP + +E AV L + D +RLL+ +
Sbjct: 97 IGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCELRLLIHQSLA 156
Query: 401 GCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRL 460
G IIG G+ I E+R ++ I + C + N + + RD +
Sbjct: 157 GGIIGVKGAKIKELR-----EIHIGVCE---CMNCN------YSKYCTFRDLMAY----- 197
Query: 461 RDDALKDRDGSR-NPPVG--ADHIYSSGTGISMPPLLP-SIPPVGPLGYDQRADSGSGIG 516
+ R G R + VG AD + S P + P G GYD G G
Sbjct: 198 ---DRRGRPGDRYDGMVGFSADETWDSAIDTWSPSEWQMAYEPQGGSGYDYSYAGGRG-- 252
Query: 517 MLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNL 576
YG L GG P +T +V +P + G +IGK G +
Sbjct: 253 --------SYGDL------------------GG--PIITTQVTIPKDLAGSIIGKGGQRI 284
Query: 577 ANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQ 618
IR SGA+I++ + DR+ I+GT +Q + A+ L+Q
Sbjct: 285 KQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQ 326
Score = 46.6 bits (109), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 33/50 (66%)
Query: 37 VIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTI 86
+ ++ P + GS+IGK G+ I IR E+ A +K+ +P G++DR++TI
Sbjct: 262 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITI 311
Score = 43.1 bits (100), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
+ +V P + G +IGKGG IK IR SGA I +D+ + ++ +IT+T + D I+
Sbjct: 262 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQ--DQIQ 319
Query: 368 SMAVEAVLLLQTKINDEDD 386
+ A LLQ + D
Sbjct: 320 N----AQYLLQNSVKQYAD 334
>gi|459269|emb|CAA54960.1| transcribed sequence 1087 [Zea mays]
Length = 228
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 105/237 (44%), Gaps = 25/237 (10%)
Query: 391 IRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVR 450
+R +V + G IIGK G+ I + + A ++IS D +D LV + G +
Sbjct: 11 VRPVVPNSSCGGIIGKGGATIKSFIEESHAGIKISPQDN-NYVGLHDRLVTITGTFDNQM 69
Query: 451 DALVQIILRLRDDALKDRDGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRAD 510
+A+ I+ +L +D + S P A + S G+ + ++P +P Y +
Sbjct: 70 NAIDLILKKLSEDVHYPPNLSSPFPY-AGLTFPSYPGVPVGYMIPQVP------YSNAVN 122
Query: 511 SGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIG 570
G GYG + P M S +S +L + + +G V+G
Sbjct: 123 YGPN---------NGYGGRYQNNKPTTPMRSPASN-----EAQESLTIGIADEHIGAVVG 168
Query: 571 KAGSNLANIRKISGATIEMSDSK---SSRGDRVALISGTPEQKRAAENLIQAFIMAT 624
+AG N+ I + SGA I++SD S DR I+GTPE R AE++I + A+
Sbjct: 169 RAGRNITEIIQASGARIKISDRGDYISGTSDRKVTITGTPEAIRTAESMIMQRVSAS 225
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 81/204 (39%), Gaps = 25/204 (12%)
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAV 204
+VP+S IIGK GATIK ++ IK++P+D ++ D V I+G
Sbjct: 14 VVPNSSCGGIIGKGGATIKSFIEESHAGIKISPQD-----NNYVGLHDRLVTITG---TF 65
Query: 205 KKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSV 264
+ AI I+ K S ED+ PP++ P +P GL P P V
Sbjct: 66 DNQMNAIDLILKKLS--EDV-------HYPPNLSSP-----FPYAGL---TFPSYPGVPV 108
Query: 265 PSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIG 324
++ + Y Y AS + + + IG V+G
Sbjct: 109 GYMIPQVPYSNAVNYGPNNGYGGRYQNNKPTTPMRSPASNEAQESLTIGIADEHIGAVVG 168
Query: 325 KGGGTIKSIRQASGAQIDVDDTKD 348
+ G I I QASGA+I + D D
Sbjct: 169 RAGRNITEIIQASGARIKISDRGD 192
>gi|403256748|ref|XP_003921014.1| PREDICTED: LOW QUALITY PROTEIN: far upstream element-binding
protein 3 [Saimiri boliviensis boliviensis]
Length = 611
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 126/318 (39%), Gaps = 45/318 (14%)
Query: 315 PFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDE--CVITVT--AIESPDDIKSMA 370
P +G +IG+GG I I+ SG +I + E CV+T T +IE +
Sbjct: 187 PDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPESIEQAKRLLGQI 246
Query: 371 VEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKAD-VRISKGDK 429
V+ ND D ++ +L+ + +G +IG+ G I ++++RT V I G
Sbjct: 247 VDRCRNGPGFHNDIDSNSTIQEILIPASKVGLVIGRGGETIKQLQERTGVKMVMIQDGPL 306
Query: 430 PKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSGTGIS 489
P AD LR+ D K + G + GIS
Sbjct: 307 PTGADKP---------------------LRITGDPFKVQVGKK----------PWHDGIS 335
Query: 490 MPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGG 549
P + +GP Q A +L++ G+G L++ +S GG
Sbjct: 336 -PERAAQV--MGPPDRCQHAAHIINELILTAQERDGFGGLAVARGRGRGRGDWSVGAPGG 392
Query: 550 LPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGD---RVALISGT 606
+ + VPA+ G VIGK G N+ +I + SGA +E+ + D R I G
Sbjct: 393 V---QEITYTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNSDPNLRRFTIRGI 449
Query: 607 PEQKRAAENLIQAFIMAT 624
P+Q A LI + T
Sbjct: 450 PQQIEVARQLIDEKVGGT 467
Score = 42.7 bits (99), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 12/104 (11%)
Query: 518 LSSSSLYGYG----SLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAG 573
L S+YGYG L G + G++ + + T E VP VG +IG+ G
Sbjct: 148 LVDPSVYGYGVQKRPLDDGGNQLGALVHQRTVI--------TEEFKVPDKMVGFIIGRGG 199
Query: 574 SNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLI 617
++ I+ SG I+++ S +R +++GTPE A+ L+
Sbjct: 200 EQISRIQAESGCKIQIASESSGIPERPCVLTGTPESIEQAKRLL 243
Score = 38.9 bits (89), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 58/126 (46%), Gaps = 18/126 (14%)
Query: 44 PDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFN 103
PD ++G +IG+ G+ I+ I+ E+ ++++ G +R + E +E
Sbjct: 187 PDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVL---TGTPESIE------ 237
Query: 104 DKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIK 163
A+ L ++ N D D +E IL+P+S+ +IG+ G TIK
Sbjct: 238 ------QAKRLLGQIVDRCRNGPGFHNDIDSNSTIQE---ILIPASKVGLVIGRGGETIK 288
Query: 164 RLRSKT 169
+L+ +T
Sbjct: 289 QLQERT 294
>gi|224079280|ref|XP_002305814.1| predicted protein [Populus trichocarpa]
gi|222848778|gb|EEE86325.1| predicted protein [Populus trichocarpa]
Length = 270
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 51/76 (67%), Gaps = 2/76 (2%)
Query: 367 KSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRIS- 425
+S +EA+L LQ K ++ + + RLLV S +GCI+G+ INE+R R +A++R+
Sbjct: 60 RSQTIEAILQLQNKTSEFSEKGMITRLLVPSSKVGCILGQGSQDINEMR-RLQAEIRVYP 118
Query: 426 KGDKPKCADANDELVE 441
K +KPKCA ++ELV+
Sbjct: 119 KNEKPKCASEDEELVQ 134
>gi|291409713|ref|XP_002721143.1| PREDICTED: poly(rC) binding protein 2-like isoform 2 [Oryctolagus
cuniculus]
Length = 340
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 82/351 (23%), Positives = 158/351 (45%), Gaps = 57/351 (16%)
Query: 297 SGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVIT 356
+G++ + L IR+L ++G +IGK G ++K +R+ SGA+I++ + N E +IT
Sbjct: 3 TGVIDGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIIT 60
Query: 357 VTAIESPDDIKSMAVEAVL-LLQTKINDEDDDT-------VTIRLLVSSKVIGCIIGKSG 408
+ P + A ++ L+ I+ ++ VT+RL+V + G +IGK G
Sbjct: 61 LAG---PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPLVTLRLVVPASQCGSLIGKGG 117
Query: 409 SIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDR 468
I EIR+ T A V+++ P ++ + + + G S+ + + I + + +
Sbjct: 118 CKIKEIRESTGAQVQVAGDMLP---NSTERAITIAGIPQSIIECVKHICVVMLE------ 168
Query: 469 DGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGS----------GIGML 518
+PP G Y PS PV G R +GS I
Sbjct: 169 ----SPPKGVTIPYRPK---------PSSSPVIFAGGQDRYSTGSDKAYTIQGQYAIPQP 215
Query: 519 SSSSLY------GYGSLSMGDSPYGSMSSYSSKL---YGGL---PPPLTLEVLVPANAVG 566
+ L+ + ++ G++ + + S S ++ + GL + E+ +P + +G
Sbjct: 216 DLTKLHQLAVQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIG 275
Query: 567 KVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLI 617
+IG G+ + I ++SGA I+++++ DR I+G+ A+ LI
Sbjct: 276 CIIGCQGAKINEICQMSGALIKIANTVEGSTDRQVTITGSAASISLAQYLI 326
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 80/350 (22%), Positives = 145/350 (41%), Gaps = 76/350 (21%)
Query: 36 SVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKED 95
++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R++T
Sbjct: 13 TLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIIT---------- 60
Query: 96 VEVDDEFNDKEPLCAAQDALLKVHAAIANAV-----ANATDNDKKRKEKEECQILVPSSQ 150
L +A+ K A I + + ++ T++ + +++VP+SQ
Sbjct: 61 ------------LAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPLVTLRLVVPASQ 108
Query: 151 SANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFA 210
++IGK G IK +R T ++V T + + I+G +++ + +
Sbjct: 109 CGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNST-------ERAITIAGIPQSIIECVKH 161
Query: 211 ISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGL--YPNADPILPSRSVPSIL 268
I +M + P+ T+ P PS P+ GG Y S +I
Sbjct: 162 ICVVMLESPPK-----GVTIPYRPK----PSSSPVIFAGGQDRYSTG-----SDKAYTIQ 207
Query: 269 GAARVPD-----LQGYADTGNTWPVY--STGLSLV-----------SGLVGASQ--SEEL 308
G +P L A + +P+ +TG S + +GL ++Q S EL
Sbjct: 208 GQYAIPQPDLTKLHQLAVQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHEL 267
Query: 309 VIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
I P + IG +IG G I I Q SGA I + +T + + +T+T
Sbjct: 268 TI----PNDLIGCIIGCQGAKINEICQMSGALIKIANTVEGSTDRQVTIT 313
>gi|198430105|ref|XP_002128022.1| PREDICTED: similar to heterogeneous nuclear ribonucleoprotein K,
like [Ciona intestinalis]
Length = 323
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 90/185 (48%), Gaps = 8/185 (4%)
Query: 302 ASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIE 361
A + +R L P G +IGKGG IK +R AQI++ D+ D+R+ + +IE
Sbjct: 52 ARHQTHIQMRCLVPAKCAGGIIGKGGTNIKDMRDTFKAQINIPDS-DSRERVLRISASIE 110
Query: 362 SPDDI--KSMAV--EAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKR 417
S +I +++ V EA L + + D ++I+LLV G IIG G I E+R++
Sbjct: 111 SCGEILLRTLPVINEAALNGPGRFGRDPKDDMSIKLLVHQSQAGGIIGVKGFKIKELREK 170
Query: 418 TKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVG 477
T A +++ + C ++ D + V G + +V I+ L K + NP G
Sbjct: 171 TGATIKVQQD---CCPNSTDRVCMVAGSAEIISSCVVLILELLETIPPKGPIQNFNPGFG 227
Query: 478 ADHIY 482
D+ +
Sbjct: 228 FDNEF 232
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 86/211 (40%), Gaps = 38/211 (18%)
Query: 22 KRRINEKDEKGNEES----------VIYRILCPDGVIGSVIGKSGKVINSIRQETRARVK 71
KR +E +E G+E S + R L P G +IGK G I +R +A++
Sbjct: 33 KRPYDETEEGGDEYSPSKRARHQTHIQMRCLVPAKCAGGIIGKGGTNIKDMRDTFKAQIN 92
Query: 72 VVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATD 131
+ P +++RV+ I + ++ + + LL+ I A N
Sbjct: 93 I--PDSDSRERVLRISASIE------------------SCGEILLRTLPVINEAALNGPG 132
Query: 132 N-DKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAME 190
+ K+ ++LV SQ+ IIG G IK LR KT +IKV C
Sbjct: 133 RFGRDPKDDMSIKLLVHQSQAGGIIGVKGFKIKELREKTGATIKVQ-------QDCCPNS 185
Query: 191 FDNFVLISGESEAVKKALFAISAIMYKFSPR 221
D +++G +E + + I ++ P+
Sbjct: 186 TDRVCMVAGSAEIISSCVVLILELLETIPPK 216
>gi|449449385|ref|XP_004142445.1| PREDICTED: RNA-binding protein Nova-2-like [Cucumis sativus]
gi|449527683|ref|XP_004170839.1| PREDICTED: RNA-binding protein Nova-2-like [Cucumis sativus]
Length = 326
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 130/318 (40%), Gaps = 66/318 (20%)
Query: 34 EESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV---DPFPGAKDRVVTIYSHV 90
E++ R L + GSVIGK G IN + ++ AR+++ + FPG DR++ + +
Sbjct: 32 EKATYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTTDRIIMVSGSI 91
Query: 91 KDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQ 150
E L A + L K+ ++ A D+ + R + +++VP S
Sbjct: 92 N--------------EILKAMELVLAKL---LSELHAEEGDDVEPRTK---VRLIVPHSS 131
Query: 151 SANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFA 210
IIGK G+TIK ++ IK++P+D ++ D V +SG +++ + A
Sbjct: 132 CGAIIGKGGSTIKSFIEDSQAGIKISPQD-----NNYMASTDRLVTLSG---TIEEQMRA 183
Query: 211 ISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGA 270
I+ K S ED P Y YP + P + G
Sbjct: 184 TDLIVSKLS--ED--------------------PHYTQSMNYPFSYPTSFNAMNYGSNGG 221
Query: 271 ARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTI 330
Q N P + S +V ++ L I V IG V+G+GG I
Sbjct: 222 GTGGRFQ------NNKPDTRS-----SEIVQEERNNSLTIGV--SDGHIGLVVGRGGRNI 268
Query: 331 KSIRQASGAQIDVDDTKD 348
I QASGA+I + D D
Sbjct: 269 LEISQASGARIKISDRGD 286
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 74/161 (45%), Gaps = 10/161 (6%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD----NRDECVITVTAIESPDD 365
IR L G VIGKGG TI + SGA+I + + D ++ +I +
Sbjct: 37 IRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTTDRIIMVSGSIN--EI 94
Query: 366 IKSMAVEAVLLLQTKINDEDDDT---VTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADV 422
+K+M + LL +E DD +RL+V G IIGK GS I + ++A +
Sbjct: 95 LKAMELVLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIGKGGSTIKSFIEDSQAGI 154
Query: 423 RISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDD 463
+IS D A + D LV + G + A I+ +L +D
Sbjct: 155 KISPQDNNYMA-STDRLVTLSGTIEEQMRATDLIVSKLSED 194
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 383 DEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEV 442
D + IR LVS+ G +IGK GS IN+ + ++ A +++S+ + D ++ V
Sbjct: 29 DNMEKATYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSR-NHEFFPGTTDRIIMV 87
Query: 443 VGEVGSVRDALVQIILRL 460
G + + A+ ++ +L
Sbjct: 88 SGSINEILKAMELVLAKL 105
>gi|357146019|ref|XP_003573848.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 470
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 78/343 (22%), Positives = 148/343 (43%), Gaps = 33/343 (9%)
Query: 298 GLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDN-RDECVIT 356
G GAS V R++ +K+G +IG+ G TI+ + + + A++ V D D + ++
Sbjct: 82 GFPGAS-----VFRLVVAGDKVGGLIGRRGETIRRLCEETRARVRVLDPADGVAGQQIVL 136
Query: 357 VTAIESPDDIKSMAVEAVLLLQTKINDED--DDTVTI----------RLLVSSKVIGCII 404
++A E + A++A + + +N+ + + +VT RLLV + +I
Sbjct: 137 ISATEETQAELAPAMDAAIKIFKHVNEIEGINASVTFSASAPEICSARLLVPKEQAAHLI 196
Query: 405 GKSGSIINEIRKRTKADVRI-SKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLR-- 461
GK G +I I++ T + +RI K D ++ +VE++G +AL ++ LR
Sbjct: 197 GKQGIMIKSIQETTGSTIRIIDKDDLLNYRMVDERIVEILGASLKALNALKSVLGLLRKF 256
Query: 462 --DDALKDRDGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLS 519
D ++ +N + S +S LP + D G
Sbjct: 257 LVDHSVLHLFERKNQAIAHAQDISKENQVSNDYALP-------VSRDLLLSDGQSPLSPK 309
Query: 520 SSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANI 579
+ YG PY S + ++ L +T + +P ++IG G N+A+I
Sbjct: 310 GNRYLSYGRDPSVCDPYSSQIRHPTE---SLIKKITQTMKIPLPQADEIIGVGGRNIAHI 366
Query: 580 RKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFIM 622
R +SGA + + ++ + + I G+ Q A L+Q ++
Sbjct: 367 RSVSGAIVVLEETGDYLNEVLVTIQGSSSQVHTAHQLVQVILL 409
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 87/183 (47%), Gaps = 16/183 (8%)
Query: 38 IYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVE 97
++R++ +G +IG+ G+ I + +ETRARV+V+DP G + + + S ++ +
Sbjct: 88 VFRLVVAGDKVGGLIGRRGETIRRLCEETRARVRVLDPADGVAGQQIVLISATEETQ--- 144
Query: 98 VDDEFNDKEPLCAAQDALLKV--HAAIANAVANATDNDKKRKEKEECQILVPSSQSANII 155
L A DA +K+ H + + E ++LVP Q+A++I
Sbjct: 145 --------AELAPAMDAAIKIFKHVNEIEGINASVTFSASAPEICSARLLVPKEQAAHLI 196
Query: 156 GKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIM 215
GK G IK ++ T ++I++ KD + M + V I G S AL ++ ++
Sbjct: 197 GKQGIMIKSIQETTGSTIRIIDKDD---LLNYRMVDERIVEILGASLKALNALKSVLGLL 253
Query: 216 YKF 218
KF
Sbjct: 254 RKF 256
>gi|426258298|ref|XP_004022751.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Ovis
aries]
Length = 330
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 135/338 (39%), Gaps = 85/338 (25%)
Query: 305 SEELV-IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTA---- 359
++E+V +R+L G VIGKGG IK++R A + V D+ + E +++++A
Sbjct: 43 TDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDS--SGPERILSISADIET 100
Query: 360 -----------------IESPDDIKSMAVE--AVLLLQTKINDEDDDTVTIRLLVSSKVI 400
+ SP + +E AV L + D +RLL+ +
Sbjct: 101 IGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCELRLLIHQSLA 160
Query: 401 GCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRL 460
G IIG G+ I E+R+ T+ +++ + C + D +V + G+ V + ++IIL L
Sbjct: 161 GGIIGVKGAKIKELRENTQTTIKLF---QECCPQSTDRVVLIGGKPDRVVEC-IKIILDL 216
Query: 461 RDDALKDRDGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSS 520
IS P+ P P YD+ D G
Sbjct: 217 ---------------------------ISESPIKGRAQPYDPNFYDETYDYG-------- 241
Query: 521 SSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIR 580
G M D G P+ + + G +IGK G + IR
Sbjct: 242 ------GFTMMFDDRRGR--------------PVGFPMRGREDLAGSIIGKGGQRIKQIR 281
Query: 581 KISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQ 618
SGA+I++ + DR+ I+GT +Q + A+ L+Q
Sbjct: 282 HESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQ 319
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 79/184 (42%), Gaps = 22/184 (11%)
Query: 28 KDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIY 87
K + +E V RIL G+VIGK GK I ++R + A V V P +R+++I
Sbjct: 38 KRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSV--PDSSGPERILSIS 95
Query: 88 SHVKDKEDV------EVDDEFNDKEPLCAAQDALLKVHAAIANAVA-NATDNDKKRKEKE 140
+ ++ ++ +++ P +Q L N +D D
Sbjct: 96 ADIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDC------ 149
Query: 141 ECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGE 200
E ++L+ S + IIG GA IK LR T+T+IK+ C D VLI G+
Sbjct: 150 ELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLF-------QECCPQSTDRVVLIGGK 202
Query: 201 SEAV 204
+ V
Sbjct: 203 PDRV 206
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 28/38 (73%)
Query: 49 GSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTI 86
GS+IGK G+ I IR E+ A +K+ +P G++DR++TI
Sbjct: 267 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITI 304
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 6/62 (9%)
Query: 320 GRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQT 379
G +IGKGG IK IR SGA I +D+ + ++ +IT+T + D I++ A LLQ
Sbjct: 267 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQ--DQIQN----AQYLLQN 320
Query: 380 KI 381
+
Sbjct: 321 SV 322
>gi|57525224|ref|NP_001006199.1| far upstream element-binding protein 3 [Gallus gallus]
gi|53127676|emb|CAG31167.1| hypothetical protein RCJMB04_2o21 [Gallus gallus]
Length = 539
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 145/350 (41%), Gaps = 60/350 (17%)
Query: 315 PFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDE--CVITVT--AIESPDDIKSMA 370
P +G +IG+GG I I+ SG +I + E CV+T T +IE +
Sbjct: 103 PDKMVGFIIGRGGEQISRIQIESGCKIQIAPDSGGMPERPCVLTGTPESIEQAKRLLGQI 162
Query: 371 VEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKAD-VRISKGDK 429
V+ ND D ++ +L+ + +G +IGK G I ++++RT + I G
Sbjct: 163 VDRCRNGPGFHNDVDGNSTIQEILIPASKVGLVIGKGGETIKQLQERTGVKMIMIQDGPM 222
Query: 430 PKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSGTG-- 487
P AD + + + G+ V+ A ++ +R+ KD+ R G + +SS G
Sbjct: 223 PTGAD---KPLRITGDAFKVQQAREMVLEIIRE---KDQADFR----GVRNDFSSRMGGG 272
Query: 488 ---ISMPPLLPSI-------------------------PPVGP------LGYDQRADSGS 513
+S+P I + P +G R +
Sbjct: 273 SIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPERVAQVMGLPDRCQHAA 332
Query: 514 GI---GMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIG 570
I +L++ G+GSL++ +S GG+ + VPA+ G VIG
Sbjct: 333 HIISELILTAQERDGFGSLAVARGRGRGRGDWSVGTPGGM---QEITYTVPADKCGLVIG 389
Query: 571 KAGSNLANIRKISGATIEMSDS---KSSRGDRVALISGTPEQKRAAENLI 617
K G N+ +I + SGA +E+ + + G R+ I G P+Q A +LI
Sbjct: 390 KGGENIKSINQQSGAHVELQRNPPPNTDPGVRIFTIRGVPQQIELARHLI 439
Score = 43.5 bits (101), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 537 GSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSR 596
G + +SS++ GG ++EV VP AVG VIG+ G + I+ +G I+
Sbjct: 260 GVRNDFSSRMGGG-----SIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGIS 314
Query: 597 GDRVALISGTPEQKRAAENLIQAFIM 622
+RVA + G P++ + A ++I I+
Sbjct: 315 PERVAQVMGLPDRCQHAAHIISELIL 340
Score = 39.3 bits (90), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 66/160 (41%), Gaps = 20/160 (12%)
Query: 27 EKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVD--PFPGAKDRVV 84
D GN S I IL P +G VIGK G+ I +++ T ++ ++ P P D+ +
Sbjct: 173 HNDVDGN--STIQEILIPASKVGLVIGKGGETIKQLQERTGVKMIMIQDGPMPTGADKPL 230
Query: 85 TIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDND-KKRKEKEECQ 143
I D F ++ A++ +L++ A ND R +
Sbjct: 231 RI-----------TGDAFKVQQ----AREMVLEIIREKDQADFRGVRNDFSSRMGGGSIE 275
Query: 144 ILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEP 183
+ VP +IG+ G IK++++ I+ P D P
Sbjct: 276 VSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISP 315
>gi|291394537|ref|XP_002713869.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 3
[Oryctolagus cuniculus]
Length = 517
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 70/317 (22%), Positives = 143/317 (45%), Gaps = 47/317 (14%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
+L +R+L P +G +IGK G TI++I + + ++IDV K+N ++T + +P+
Sbjct: 133 DLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHR-KENAGAAEKSITILSTPEGT 191
Query: 367 KSMAVEAVLLLQTKINDEDDDT-----VTIRLLVSSKVIGCIIGKSGSIINEIRKRTKAD 421
S A +++L + ++ E DT + +++L + +G +IGK G + +I + T
Sbjct: 192 -SAACKSILEI---MHKEAQDTKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTK 247
Query: 422 VRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHI 481
+ IS + + + + V G V + A +I+ ++R+ D I
Sbjct: 248 ITISPLQELTLYNP-ERTITVKGSVETCAKAEEEIMKKIRESYEND-------------I 293
Query: 482 YSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSS 541
S + P L + LG S++ PY +
Sbjct: 294 ASMNLQAHLIPGLN----LNALGLFPPTPGMPPPTPGPPSAM---------APPYPPLEQ 340
Query: 542 YSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGD-RV 600
++ T+ + +PA +VG +IGK G ++ + + +GA+I+++ +++ R+
Sbjct: 341 SETE---------TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRM 391
Query: 601 ALISGTPEQKRAAENLI 617
+I+G PE + A+ I
Sbjct: 392 VIITGPPEAQFKAQGRI 408
Score = 43.5 bits (101), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 82/176 (46%), Gaps = 20/176 (11%)
Query: 304 QSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDV--DDTKDNRDECVITVTAIE 361
QSE + + P +G +IGK G IK + + +GA I + + D + VI I
Sbjct: 340 QSETETVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVI----IT 395
Query: 362 SPDDIKSMA---VEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRT 418
P + + A + + + ++ +++ + + V S G +IGK G +NE++ +
Sbjct: 396 GPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNLS 455
Query: 419 KADVRISKGDKPKCADANDE-LVEVVGEVGS-------VRDALVQIILRLRDDALK 466
A+V + + P D ND+ +V++ G + +++ L Q+ + AL+
Sbjct: 456 SAEVVVPRDQTP---DENDQVVVKITGHFYACQVAQRKIQEILTQVKQHHQQKALQ 508
Score = 42.0 bits (97), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 64/139 (46%), Gaps = 24/139 (17%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKEDVEV 98
R+L P +G++IGK G I +I ++T++++ V GA ++ +TI S
Sbjct: 137 RLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILS---------- 186
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
E AA ++L+ + + D K E+ +IL ++ +IGK
Sbjct: 187 -----TPEGTSAACKSILE--------IMHKEAQDTKFTEEIPLKILAHNNFVGRLIGKE 233
Query: 159 GATIKRLRSKTRTSIKVTP 177
G +K++ T T I ++P
Sbjct: 234 GRNLKKIEQDTDTKITISP 252
Score = 38.9 bits (89), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 48/100 (48%), Gaps = 10/100 (10%)
Query: 135 KRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNF 194
++ E E + +P+ IIGK G IK+L SIK+ P +A P M
Sbjct: 339 EQSETETVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEA--PDAKVRM----- 391
Query: 195 VLISGESEAVKKALFAISAIMYK---FSPREDIPLETTVR 231
V+I+G EA KA I + + SP+E++ LE +R
Sbjct: 392 VIITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIR 431
>gi|348558005|ref|XP_003464809.1| PREDICTED: RNA-binding protein Nova-1 isoform 2 [Cavia porcellus]
Length = 483
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 88/174 (50%), Gaps = 19/174 (10%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD-----NRDECVI--TVTA 359
+ ++VL P G +IGKGG TI +++ +GA I + +KD C+I TV A
Sbjct: 49 QYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEA 108
Query: 360 IES-----PDDIKSM-----AVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGS 409
+ + + I+ M E V +LQ + D ++++V + G IIGK G+
Sbjct: 109 LNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQVKIIVPNSTAGLIIGKGGA 168
Query: 410 IINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDD 463
+ I +++ A V++S+ KP + + +V V GE R A+ II ++++D
Sbjct: 169 TVKAIMEQSGAWVQLSQ--KPDGINLQERVVTVSGEPEQNRKAVELIIQKIQED 220
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 85/199 (42%), Gaps = 45/199 (22%)
Query: 27 EKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV---DPFPGAKDRV 83
++ G + ++L P GS+IGK G+ I +++ET A +K+ D +PG +RV
Sbjct: 40 KRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERV 99
Query: 84 VTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRK------ 137
I V +AL VH IA + N K +
Sbjct: 100 CLIQGTV----------------------EALNAVHGFIAEKIREMPQNVAKTEPVSILQ 137
Query: 138 --------EKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAM 189
++ +I+VP+S + IIGK GAT+K + ++ ++++ K P
Sbjct: 138 PQTTVNPDRIKQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQK----PDGINLQ 193
Query: 190 EFDNFVLISGESEAVKKAL 208
E V +SGE E +KA+
Sbjct: 194 E--RVVTVSGEPEQNRKAV 210
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 41/69 (59%), Gaps = 7/69 (10%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS---SRGDRVALISGTPEQKRA 612
L+VL+P+ A G +IGK G + ++K +GATI++S SK +RV LI GT E
Sbjct: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVE---- 107
Query: 613 AENLIQAFI 621
A N + FI
Sbjct: 108 ALNAVHGFI 116
Score = 42.0 bits (97), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS---SRGDRVALISGTPEQKRA 612
+E+ VP N VG ++GK G L ++++GA I++S +R I+GTP +A
Sbjct: 400 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAATQA 459
Query: 613 AENLI 617
A+ LI
Sbjct: 460 AQYLI 464
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS--SRGDRVALISGTPEQKRAA 613
++++VP + G +IGK G+ + I + SGA +++S + +RV +SG PEQ R A
Sbjct: 150 VKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGINLQERVVTVSGEPEQNRKA 209
Query: 614 ENLI 617
LI
Sbjct: 210 VELI 213
>gi|334311844|ref|XP_001369630.2| PREDICTED: far upstream element-binding protein 3 [Monodelphis
domestica]
Length = 574
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 142/348 (40%), Gaps = 56/348 (16%)
Query: 315 PFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDE--CVITVT--AIESPDDIKSMA 370
P +G +IG+GG I I+ SG +I + E CV+T T +IE +
Sbjct: 87 PDKMVGFIIGRGGEQISRIQAESGCKIQIAPESSGIPERPCVLTGTPESIEQAKRLLGQI 146
Query: 371 VEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKAD-VRISKGDK 429
V+ ND D + +L+ + +G +IGK G I ++++RT + I G
Sbjct: 147 VDRCRNGPGFHNDVDGNNTIQEILIPASKVGLVIGKGGETIKQLQERTGVKMIMIQDGPL 206
Query: 430 PKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSGTG-- 487
P AD + + + G+ V+ A ++ +R+ D G V +D G G
Sbjct: 207 PTGAD---KPLRITGDPFKVQQAREMVLEIIREKDQADFRG-----VRSDFSSRMGGGSI 258
Query: 488 -ISMPPLLPSI-------------------------PPVGP------LGYDQRADSGSGI 515
+S+P I + P +G +R + +
Sbjct: 259 EVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPERVAQVMGLPERCQHAAHV 318
Query: 516 ---GMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKA 572
+L++ G+GSLS+ S +S GGL + VPA+ G VIGK
Sbjct: 319 ISDLILTAQERDGFGSLSVPRGRGRGRSDWSIGAPGGL---QEVTYTVPADKCGLVIGKG 375
Query: 573 GSNLANIRKISGATIEMSDSKSSRGD---RVALISGTPEQKRAAENLI 617
G N+ +I + SGA +E+ + D R+ I G P+Q A +LI
Sbjct: 376 GENIKSINQQSGAHVELQRNPPPNTDPSVRIFTIRGVPQQIELARHLI 423
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 537 GSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSR 596
G S +SS++ GG ++EV VP AVG VIG+ G + I+ +G I+
Sbjct: 244 GVRSDFSSRMGGG-----SIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGIS 298
Query: 597 GDRVALISGTPEQKRAAENLIQAFIM 622
+RVA + G PE+ + A ++I I+
Sbjct: 299 PERVAQVMGLPERCQHAAHVISDLIL 324
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%)
Query: 554 LTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAA 613
+T E VP VG +IG+ G ++ I+ SG I+++ S +R +++GTPE A
Sbjct: 80 ITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIAPESSGIPERPCVLTGTPESIEQA 139
Query: 614 ENLI 617
+ L+
Sbjct: 140 KRLL 143
Score = 40.0 bits (92), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 75/164 (45%), Gaps = 24/164 (14%)
Query: 44 PDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFN 103
PD ++G +IG+ G+ I+ I+ E+ ++++ G +R + E +E
Sbjct: 87 PDKMVGFIIGRGGEQISRIQAESGCKIQIAPESSGIPERPCVL---TGTPESIE------ 137
Query: 104 DKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIK 163
A+ L ++ N D D +E IL+P+S+ +IGK G TIK
Sbjct: 138 ------QAKRLLGQIVDRCRNGPGFHNDVDGNNTIQE---ILIPASKVGLVIGKGGETIK 188
Query: 164 RLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKA 207
+L+ +T + + +D PT + D + I+G+ V++A
Sbjct: 189 QLQERTGVKM-IMIQDGPLPTGA-----DKPLRITGDPFKVQQA 226
>gi|314122361|ref|NP_001186642.1| RNA-binding protein Nova-1 isoform 2 [Gallus gallus]
gi|114652477|ref|XP_001170656.1| PREDICTED: RNA-binding protein Nova-1 isoform 2 [Pan troglodytes]
gi|224051380|ref|XP_002200538.1| PREDICTED: RNA-binding protein Nova-1 isoform 1 [Taeniopygia
guttata]
gi|291403673|ref|XP_002718161.1| PREDICTED: neuro-oncological ventral antigen 1 isoform 2
[Oryctolagus cuniculus]
gi|296214718|ref|XP_002753742.1| PREDICTED: RNA-binding protein Nova-1 isoform 2 [Callithrix
jacchus]
gi|297694851|ref|XP_002824681.1| PREDICTED: RNA-binding protein Nova-1-like isoform 2 [Pongo abelii]
gi|332223199|ref|XP_003260755.1| PREDICTED: RNA-binding protein Nova-1-like isoform 2 [Nomascus
leucogenys]
gi|344273489|ref|XP_003408554.1| PREDICTED: RNA-binding protein Nova-1-like isoform 1 [Loxodonta
africana]
gi|345804243|ref|XP_860979.2| PREDICTED: RNA-binding protein Nova-1 isoform 6 [Canis lupus
familiaris]
gi|395838272|ref|XP_003792041.1| PREDICTED: RNA-binding protein Nova-1-like isoform 2 [Otolemur
garnettii]
gi|410962022|ref|XP_003987576.1| PREDICTED: RNA-binding protein Nova-1-like isoform 2 [Felis catus]
gi|426376606|ref|XP_004055088.1| PREDICTED: RNA-binding protein Nova-1-like isoform 2 [Gorilla
gorilla gorilla]
gi|122064615|sp|Q2PFW9.1|NOVA1_MACFA RecName: Full=RNA-binding protein Nova-1; AltName:
Full=Neuro-oncological ventral antigen 1; AltName:
Full=Ventral neuron-specific protein 1
gi|84579135|dbj|BAE73001.1| hypothetical protein [Macaca fascicularis]
gi|90079349|dbj|BAE89354.1| unnamed protein product [Macaca fascicularis]
gi|380813128|gb|AFE78438.1| RNA-binding protein Nova-1 isoform 2 [Macaca mulatta]
Length = 483
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 88/174 (50%), Gaps = 19/174 (10%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD-----NRDECVI--TVTA 359
+ ++VL P G +IGKGG TI +++ +GA I + +KD C+I TV A
Sbjct: 49 QYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEA 108
Query: 360 IES-----PDDIKSM-----AVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGS 409
+ + + I+ M E V +LQ + D ++++V + G IIGK G+
Sbjct: 109 LNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQVKIIVPNSTAGLIIGKGGA 168
Query: 410 IINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDD 463
+ I +++ A V++S+ KP + + +V V GE R A+ II ++++D
Sbjct: 169 TVKAIMEQSGAWVQLSQ--KPDGINLQERVVTVSGEPEQNRKAVELIIQKIQED 220
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 85/199 (42%), Gaps = 45/199 (22%)
Query: 27 EKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV---DPFPGAKDRV 83
++ G + ++L P GS+IGK G+ I +++ET A +K+ D +PG +RV
Sbjct: 40 KRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERV 99
Query: 84 VTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRK------ 137
I V +AL VH IA + N K +
Sbjct: 100 CLIQGTV----------------------EALNAVHGFIAEKIREMPQNVAKTEPVSILQ 137
Query: 138 --------EKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAM 189
++ +I+VP+S + IIGK GAT+K + ++ ++++ K P
Sbjct: 138 PQTTVNPDRIKQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQK----PDGINLQ 193
Query: 190 EFDNFVLISGESEAVKKAL 208
E V +SGE E +KA+
Sbjct: 194 E--RVVTVSGEPEQNRKAV 210
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 41/69 (59%), Gaps = 7/69 (10%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS---SRGDRVALISGTPEQKRA 612
L+VL+P+ A G +IGK G + ++K +GATI++S SK +RV LI GT E
Sbjct: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVE---- 107
Query: 613 AENLIQAFI 621
A N + FI
Sbjct: 108 ALNAVHGFI 116
Score = 42.0 bits (97), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS---SRGDRVALISGTPEQKRA 612
+E+ VP N VG ++GK G L ++++GA I++S +R I+GTP +A
Sbjct: 400 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAATQA 459
Query: 613 AENLI 617
A+ LI
Sbjct: 460 AQYLI 464
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS--SRGDRVALISGTPEQKRAA 613
++++VP + G +IGK G+ + I + SGA +++S + +RV +SG PEQ R A
Sbjct: 150 VKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGINLQERVVTVSGEPEQNRKA 209
Query: 614 ENLI 617
LI
Sbjct: 210 VELI 213
>gi|308798891|ref|XP_003074225.1| putative nucleic acid binding protein (ISS) [Ostreococcus tauri]
gi|116000397|emb|CAL50077.1| putative nucleic acid binding protein (ISS) [Ostreococcus tauri]
Length = 402
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 90/364 (24%), Positives = 145/364 (39%), Gaps = 71/364 (19%)
Query: 309 VIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIES---PDD 365
V RVLC ++G +IG+ G ++ I +GAQ+ V + E + + A + P D
Sbjct: 17 VFRVLCAETRVGGLIGRQGKRVRGIVTETGAQVKVLASTARCHERAVLIFAPRARDGPGD 76
Query: 366 IKSM------AVEAVLLLQTKINDEDDDT------------------------------- 388
+ V + + DE D
Sbjct: 77 TCAAREGARRVVRYLTRARAVTEDECDGARDESEDESDDDDDGRRGDGVGGQDLGRSTAH 136
Query: 389 VTIRLLVSSKVIGCIIGKSGSIINEIRKRTK-ADVRISK-GDKPKCADANDELVEVVGEV 446
VT+RLLV + G +IGK G I E+RKR A V + + G P CA + D +VE+ G+
Sbjct: 137 VTLRLLVPAGQAGHLIGKGGENIQEVRKRANGAHVAVQEVGQVPPCATSEDRVVEIHGKP 196
Query: 447 GSVRDALVQIILRLRD-----DALKDRDGSRNPPVGAD--HIYSSGTGISMPPLLPSIPP 499
VR A + L+D L + P GA+ + ++ GI P+ P
Sbjct: 197 KDVRVAADAVFESLKDYLVDSSVLGHYQPTVAAPAGANVGDVGATAMGIGNHPMS---AP 253
Query: 500 VG--PLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLE 557
+G P+G A G G + + + G P G PP+
Sbjct: 254 MGMAPVGM---APVGMAPGTMMIPVMPMMTQMQPGMQPAGM-------------PPVHDS 297
Query: 558 VLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQK-RAAENL 616
V + V V+G+ G+N++ I +ISG + + ++ +SG E AA++L
Sbjct: 298 VEIDGEKVANVLGEHGANISTIAQISGCQVSLIETNPDTNLSEVELSGPHESNIAAAKSL 357
Query: 617 IQAF 620
++AF
Sbjct: 358 VRAF 361
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 75/352 (21%), Positives = 131/352 (37%), Gaps = 75/352 (21%)
Query: 36 SVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKED 95
+ ++R+LC + +G +IG+ GK + I ET A+VKV+ +R V I++
Sbjct: 15 TAVFRVLCAETRVGGLIGRQGKRVRGIVTETGAQVKVLASTARCHERAVLIFAP------ 68
Query: 96 VEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATD------------------------ 131
D D CAA++ +V + A A D
Sbjct: 69 -RARDGPGDT---CAAREGARRVVRYLTRARAVTEDECDGARDESEDESDDDDDGRRGDG 124
Query: 132 ---NDKKRKEKE-ECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSC 187
D R ++LVP+ Q+ ++IGK G I+ +R + + + P C
Sbjct: 125 VGGQDLGRSTAHVTLRLLVPAGQAGHLIGKGGENIQEVRKRANGAHVAVQEVGQVP--PC 182
Query: 188 AMEFDNFVLISGESEAVKKALFAI----------SAIMYKFSPREDIPLETTVREAPPSI 237
A D V I G+ + V+ A A+ S+++ + P P V + +
Sbjct: 183 ATSEDRVVEIHGKPKDVRVAADAVFESLKDYLVDSSVLGHYQPTVAAPAGANVGDVGATA 242
Query: 238 IIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVP---DLQGYADTGNTWPVYSTGLS 294
+ + P+ P G+ P + P P + +P +Q PV+ +
Sbjct: 243 MGIGNHPMSAPMGMAPVG--MAPVGMAPGTMMIPVMPMMTQMQPGMQPAGMPPVHDS--- 297
Query: 295 LVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDT 346
V K+ V+G+ G I +I Q SG Q+ + +T
Sbjct: 298 -----------------VEIDGEKVANVLGEHGANISTIAQISGCQVSLIET 332
>gi|225000564|gb|AAI72604.1| Neuro-oncological ventral antigen 2 [synthetic construct]
Length = 583
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 85/173 (49%), Gaps = 21/173 (12%)
Query: 309 VIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD-----NRDECVITVTAIESP 363
++VL P G +IGKGG TI +++ +GA I + +KD C++ TA E+
Sbjct: 125 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTA-EAL 183
Query: 364 DDIKSMAVEAVL-------------LLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSI 410
+ + S E V +LQ + D +L+V + G IIGK G+
Sbjct: 184 NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGAT 243
Query: 411 INEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDD 463
+ + +++ A V++S+ KP+ + + +V V GE V A+ I+ ++++D
Sbjct: 244 VKAVMEQSGAWVQLSQ--KPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQED 294
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 84/177 (47%), Gaps = 17/177 (9%)
Query: 38 IYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV---DPFPGAKDRVVTIYSHVKDKE 94
++L P GS+IGK G+ I +++ET A +K+ D +PG +RV + E
Sbjct: 125 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQG---TAE 181
Query: 95 DVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANI 154
+ F E + A+ K + N + T + R ++ +++VP+S + I
Sbjct: 182 ALNAVHSF-IAEKVREIPQAMTKPE--VVNILQPQTTMNPDR--AKQAKLIVPNSTAGLI 236
Query: 155 IGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAI 211
IGK GAT+K + ++ ++++ K + V +SGE E V KA+ AI
Sbjct: 237 IGKGGATVKAVMEQSGAWVQLSQKPEGINLQ------ERVVTVSGEPEQVHKAVSAI 287
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 42/69 (60%), Gaps = 7/69 (10%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSK---SSRGDRVALISGTPEQKRA 612
L+VL+P+ A G +IGK G + ++K +GATI++S SK +RV L+ GT E
Sbjct: 126 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAE---- 181
Query: 613 AENLIQAFI 621
A N + +FI
Sbjct: 182 ALNAVHSFI 190
Score = 42.0 bits (97), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 5/66 (7%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDS----KSSRGDRVALISGTPEQKR 611
+E+ VP N VG ++GK G L ++++GA I++S +R RV I+G+P +
Sbjct: 500 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVT-ITGSPAATQ 558
Query: 612 AAENLI 617
AA+ LI
Sbjct: 559 AAQYLI 564
>gi|431909188|gb|ELK12778.1| RNA-binding protein Nova-2 [Pteropus alecto]
Length = 334
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 86/175 (49%), Gaps = 21/175 (12%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD-----NRDECVITVTAIE 361
E ++VL P G +IGKGG TI +++ +GA I + +KD C++ TA E
Sbjct: 32 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTA-E 90
Query: 362 SPDDIKSMAVEAVL-------------LLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSG 408
+ + + S E V +LQ + D +L+V + G IIGK G
Sbjct: 91 ALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGG 150
Query: 409 SIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDD 463
+ + + +++ A V++S+ KP+ + + +V V GE V A+ I+ ++++D
Sbjct: 151 ATVKAVMEQSGAWVQLSQ--KPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQED 203
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 137/322 (42%), Gaps = 61/322 (18%)
Query: 26 NEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV---DPFPGAKDR 82
++ G E ++L P GS+IGK G+ I +++ET A +K+ D +PG +R
Sbjct: 22 TKRSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTER 81
Query: 83 VVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEEC 142
V + E + F E + A+ K + N + T + R ++
Sbjct: 82 VCLVQG---TAEALNAVHSF-IAEKVREIPQAMTKPE--VVNILQPQTTMNPDR--AKQA 133
Query: 143 QILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESE 202
+++VP+S + IIGK GAT+K + ++ ++++ K + V +SGE E
Sbjct: 134 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQ------ERVVTVSGEPE 187
Query: 203 AVKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSR 262
V K A+SAI+ K V+E P S ++ G N++P +
Sbjct: 188 QVHK---AVSAIVQK------------VQEDPQSSSC-LNISYANVAGPVANSNPTAAAG 231
Query: 263 SVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRV 322
+ L A ++ A++S + ++ + P N +G +
Sbjct: 232 AAGGFLTAEKL----------------------------AAESAKELVEIAVPENLVGAI 263
Query: 323 IGKGGGTIKSIRQASGAQIDVD 344
+GKGG T+ ++ +GA+I +
Sbjct: 264 LGKGGKTLVEYQELTGARIQIS 285
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 42/69 (60%), Gaps = 7/69 (10%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS---SRGDRVALISGTPEQKRA 612
L+VL+P+ A G +IGK G + ++K +GATI++S SK +RV L+ GT E
Sbjct: 35 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAE---- 90
Query: 613 AENLIQAFI 621
A N + +FI
Sbjct: 91 ALNAVHSFI 99
Score = 42.0 bits (97), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 5/66 (7%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDS----KSSRGDRVALISGTPEQKR 611
+E+ VP N VG ++GK G L ++++GA I++S +R RV I+G+P +
Sbjct: 251 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVT-ITGSPAATQ 309
Query: 612 AAENLI 617
AA+ LI
Sbjct: 310 AAQYLI 315
>gi|324505572|gb|ADY42393.1| Heterogeneous nuclear ribonucleoprotein K [Ascaris suum]
Length = 415
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 136/339 (40%), Gaps = 70/339 (20%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSM 369
+R+L P G VIGKGG +IK +R A + + D++ E ++T+ A D++
Sbjct: 107 LRLLVPSRGAGAVIGKGGESIKRLRAECDATLTIPDSQT--PERIVTIVA--EIDNVIRC 162
Query: 370 AVEAVLLLQ--TKINDEDDD-----TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADV 422
E + L K D DD+ +RLLV G IIG+ G I E+R+ T +
Sbjct: 163 VNEIIPRLDECLKTRDSDDEGSARGESELRLLVHQSHAGAIIGRGGYRIKELREETSTQL 222
Query: 423 RISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGA---- 478
++ C + + +++++G + ++ II L++ +K G P
Sbjct: 223 KVY---SQCCPQSTERVIQIIGVPEKIIACVILIINMLKEIPIK---GPSRPYESMFYDP 276
Query: 479 DHIYSSGTGISMPP----------------LLPSIPPVGPLGYDQRADSGSGIGMLSSSS 522
+ ++ G PP LP P P G G G+GM S
Sbjct: 277 NFVHEYG---GFPPDRNYRGMGPRGGMYGGGLPPRAPRFPYG-------GRGMGMGVSPF 326
Query: 523 LYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKI 582
M T +V +P G +IGK G + IR+
Sbjct: 327 PPAPFGGPM----------------------QTTQVTIPNELGGTIIGKGGERINRIREE 364
Query: 583 SGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFI 621
SGA I + + + +R+ ISG+ Q + A+ L+Q +
Sbjct: 365 SGAHI-VVEPQQPNSERIITISGSHAQIQTAQYLLQQCV 402
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 131/332 (39%), Gaps = 65/332 (19%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVD 99
R+L P G+VIGK G+ I +R E A + + P +R+VTI + E+D
Sbjct: 108 RLLVPSRGAGAVIGKGGESIKRLRAECDATLTI--PDSQTPERIVTIVA--------EID 157
Query: 100 DEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAG 159
+ + D LK +D++ + + E ++LV S + IIG+ G
Sbjct: 158 NVIRCVNEIIPRLDECLK---------TRDSDDEGSARGESELRLLVHQSHAGAIIGRGG 208
Query: 160 ATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFS 219
IK LR +T T +KV + C + + I G E + I+ ++ +
Sbjct: 209 YRIKELREETSTQLKVY-------SQCCPQSTERVIQIIGVPEKI------IACVILIIN 255
Query: 220 PREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNAD------------PILPSRSVPSI 267
++IP++ R P+ V Y GG P+ + LP R
Sbjct: 256 MLKEIPIKGPSRPYESMFYDPNFVHEY--GGFPPDRNYRGMGPRGGMYGGGLPPR----- 308
Query: 268 LGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGG 327
A R P Y G G+ + +V P G +IGKGG
Sbjct: 309 --APRFP----YGGRG-------MGMGVSPFPPAPFGGPMQTTQVTIPNELGGTIIGKGG 355
Query: 328 GTIKSIRQASGAQIDVDDTKDNRDECVITVTA 359
I IR+ SGA I V+ + N E +IT++
Sbjct: 356 ERINRIREESGAHIVVEPQQPN-SERIITISG 386
>gi|342880804|gb|EGU81822.1| hypothetical protein FOXB_07617 [Fusarium oxysporum Fo5176]
Length = 372
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 149/339 (43%), Gaps = 58/339 (17%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
+L +R + + G +IGKGG + +R +G + V + V+T+T D I
Sbjct: 46 QLTLRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTITG--GCDAI 103
Query: 367 -KSMAVEAVLLLQTKIND------EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
++ A+ A LL+ + + T I+LL+S +G IIG+ G I I+ +
Sbjct: 104 SRAYAIVARALLEGAPAMGMGGVVQSNGTHPIKLLISHNQMGTIIGRQGLKIKHIQDASG 163
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGAD 479
+ K P+ + + +VEV G ++ A+ +I L DD
Sbjct: 164 VRMVAQKEMLPQ---STERIVEVQGTPEGIQRAIWEICKCLVDD---------------- 204
Query: 480 HIYSSGTGISM-PPLLPSIPPVGPLG-----YDQ---RADSGSGIGMLSSSSLYGYGS-L 529
+ GTG + P++ + P + Q R+D G ++ + G G+
Sbjct: 205 --WQRGTGTVLYNPVVRTQPSGSGNASGGAGFSQGSGRSDYGGSPRVMRT----GNGADF 258
Query: 530 SMGDS-PYGSMSSYSSKLYGGLPPPL---------TLEVLVPANAVGKVIGKAGSNLANI 579
S G+S PY S + L G PP T + +PA+ VG +IG+AGS ++ I
Sbjct: 259 SNGNSRPYNRRSDSDAALRG---PPTHDENGEEIQTQNISIPADMVGCIIGRAGSKISEI 315
Query: 580 RKISGATIEMSDS-KSSRGDRVALISGTPEQKRAAENLI 617
RK SGA I ++ + G+R+ I GT + +A L+
Sbjct: 316 RKTSGARISIAKAPHDETGERMFTIMGTAKANESALFLL 354
Score = 42.7 bits (99), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 80/374 (21%), Positives = 143/374 (38%), Gaps = 61/374 (16%)
Query: 29 DEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYS 88
DE+ + + R + G +IGK GK + +R ET + V G DRV+TI
Sbjct: 39 DEEYAQAQLTLRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTI-- 96
Query: 89 HVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAV-----ANATDNDKKRKEKEECQ 143
DA+ + +A +A A+ A + +
Sbjct: 97 --------------------TGGCDAISRAYAIVARALLEGAPAMGMGGVVQSNGTHPIK 136
Query: 144 ILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEA 203
+L+ +Q IIG+ G IK ++ + +++ + P + + V + G E
Sbjct: 137 LLISHNQMGTIIGRQGLKIKHIQDA--SGVRMVAQKEMLPQST-----ERIVEVQGTPEG 189
Query: 204 VKKALFAISAIMYKFSPR--EDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPS 261
+++A++ I + R + VR P S + G
Sbjct: 190 IQRAIWEICKCLVDDWQRGTGTVLYNPVVRTQPSGSGNASGGAGFSQG----------SG 239
Query: 262 RSVPSILGAARVPDLQGYAD--TGNTWPVYSTGLSLVSGLVGA----SQSEELVIR-VLC 314
RS G+ RV AD GN+ P Y+ + L G EE+ + +
Sbjct: 240 RS--DYGGSPRVMRTGNGADFSNGNSRP-YNRRSDSDAALRGPPTHDENGEEIQTQNISI 296
Query: 315 PFNKIGRVIGKGGGTIKSIRQASGAQIDV-----DDTKDNRDECVITVTAIESPDDIKSM 369
P + +G +IG+ G I IR+ SGA+I + D+T + + T A ES +
Sbjct: 297 PADMVGCIIGRAGSKISEIRKTSGARISIAKAPHDETGERMFTIMGTAKANESALFLLYE 356
Query: 370 AVEAVLLLQTKIND 383
+EA + ++++ +
Sbjct: 357 NLEAEKMRRSQLQE 370
>gi|431898917|gb|ELK07287.1| Far upstream element-binding protein 3 [Pteropus alecto]
Length = 595
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 140/343 (40%), Gaps = 46/343 (13%)
Query: 315 PFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDE--CVITVT--AIESPDDIKSMA 370
P +G +IG+GG I I+ SG +I + E CV+T T +IE +
Sbjct: 85 PDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPESIEQAKRLLGQI 144
Query: 371 VEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKAD-VRISKGDK 429
V+ ND D ++ +L+ + +G +IGK G I ++++RT V I G
Sbjct: 145 VDRCRNGPGFHNDIDGNSTVQEILIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPL 204
Query: 430 PKCADANDELVEVVGEVGSVRDA--LVQIILR---------LRDDALKDRDGS------- 471
P A D+ + + G+ V+ A +V I+R +R D G
Sbjct: 205 PTGA---DKPLRITGDPFKVQQAREMVLEIIREKDQADFRGIRSDFTSRMGGGSIEVSVP 261
Query: 472 ---------RNPPVGADHIYSSGTGISMPP---LLP--SIPPVGPLGYDQRADSGSGIGM 517
RN + +G I P + P + +GP Q A +
Sbjct: 262 RFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPERAAQVMGPPDRCQHAAHIINELI 321
Query: 518 LSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLA 577
L++ G+G L++ +S GG+ + VPA+ G VIGK G N+
Sbjct: 322 LTAQERDGFGGLAVARGRGRGRGDWSMGTPGGI---QEITYTVPADKCGLVIGKGGENIK 378
Query: 578 NIRKISGATIEMSDSKSSRGD---RVALISGTPEQKRAAENLI 617
+I + SGA +E+ + D RV I G P+Q A +LI
Sbjct: 379 SINQQSGAHVELQRNPPPNTDPSLRVFTIRGVPQQIEVARHLI 421
Score = 42.0 bits (97), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 537 GSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSR 596
G S ++S++ GG ++EV VP AVG VIG+ G + I+ +G I+
Sbjct: 242 GIRSDFTSRMGGG-----SIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGIS 296
Query: 597 GDRVALISGTPEQKRAAENLIQAFIM 622
+R A + G P++ + A ++I I+
Sbjct: 297 PERAAQVMGPPDRCQHAAHIINELIL 322
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%)
Query: 554 LTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAA 613
+T E VP VG +IG+ G ++ I+ SG I+++ S +R +++GTPE A
Sbjct: 78 ITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPESIEQA 137
Query: 614 ENLI 617
+ L+
Sbjct: 138 KRLL 141
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 75/164 (45%), Gaps = 24/164 (14%)
Query: 44 PDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFN 103
PD ++G +IG+ G+ I+ I+ E+ ++++ G +R + E +E
Sbjct: 85 PDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVL---TGTPESIE------ 135
Query: 104 DKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIK 163
A+ L ++ N D D +E IL+P+S+ +IGK G TIK
Sbjct: 136 ------QAKRLLGQIVDRCRNGPGFHNDIDGNSTVQE---ILIPASKVGLVIGKGGETIK 186
Query: 164 RLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKA 207
+L+ +T + V +D PT + D + I+G+ V++A
Sbjct: 187 QLQERTGVKM-VMIQDGPLPTGA-----DKPLRITGDPFKVQQA 224
>gi|170592745|ref|XP_001901125.1| KH domain containing protein [Brugia malayi]
gi|158591192|gb|EDP29805.1| KH domain containing protein [Brugia malayi]
Length = 354
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 145/321 (45%), Gaps = 51/321 (15%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSM 369
+R+L G +IGK G ++K+I+ A + V D++ + V V A+E+
Sbjct: 69 LRLLVTSRGAGAIIGKKGESVKNIQTECDATVSVPDSQ-TPERVVQLVAAVEN----VVK 123
Query: 370 AVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDK 429
VE ++ +++D + +++LV G +IG+ GS I E+R+ D+++
Sbjct: 124 CVEMIIARIDEVHDNQNRDSELKVLVHQSHAGAVIGRGGSRIKELREENGVDLKVY---S 180
Query: 430 PKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSGTGIS 489
C + + ++++ G+ + LV II L++ +K G Y S I
Sbjct: 181 ECCPQSTERIIQINGKPEKIVACLVTIINTLKEIPIK----------GPSRPYES---IF 227
Query: 490 MPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGG 549
P++ + + G G S + GYG P G + S YG
Sbjct: 228 FDPMVAN-------------EYGGYAGDHSGRGIRGYG-------PRGRIPLPS---YGS 264
Query: 550 LPP-----PL-TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALI 603
+PP PL T +V VP G +IG+ G + IR SGA I++ + + G+R+ I
Sbjct: 265 VPPAYDDGPLETAQVTVPNELGGTIIGRGGERIRRIRDESGAHIKI-EEEDPNGERIITI 323
Query: 604 SGTPEQKRAAENLIQAFIMAT 624
SGTP Q A+ L+Q + ++
Sbjct: 324 SGTPSQIEMAQFLLQQCVRSS 344
Score = 43.5 bits (101), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 69/172 (40%), Gaps = 34/172 (19%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVD 99
R+L G++IGK G+ + +I+ E A V V P +RVV
Sbjct: 70 RLLVTSRGAGAIIGKKGESVKNIQTECDATVSV--PDSQTPERVVQ-------------- 113
Query: 100 DEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAG 159
L AA + ++K I + DN + E ++LV S + +IG+ G
Sbjct: 114 --------LVAAVENVVKCVEMIIARIDEVHDNQNR---DSELKVLVHQSHAGAVIGRGG 162
Query: 160 ATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAI 211
+ IK LR + +KV + C + + I+G+ E + L I
Sbjct: 163 SRIKELREENGVDLKVY-------SECCPQSTERIIQINGKPEKIVACLVTI 207
>gi|164655395|ref|XP_001728827.1| hypothetical protein MGL_3994 [Malassezia globosa CBS 7966]
gi|159102713|gb|EDP41613.1| hypothetical protein MGL_3994 [Malassezia globosa CBS 7966]
Length = 382
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 149/325 (45%), Gaps = 60/325 (18%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
+V+R L + +IGK G I IR+ S A++++ ++ + E ++TV+ + D +
Sbjct: 85 IVMRALIITSDASVIIGKQGRHINEIRELSNARLNISESIPSNPERILTVSG--ALDAVS 142
Query: 368 SMAVEAVLLLQTKINDEDDD--------TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
+A LL +INDE D +IR ++ + +G IIG+ GS I EI++ +
Sbjct: 143 ----KAFGLLVRRINDEPFDQPSLPGSRAASIRFIIPNSRMGAIIGRQGSKIKEIQEASG 198
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRD-GSRNPPVGA 478
A R+ G+ + + ++ + G V DAL + + L+ D GS N P
Sbjct: 199 A--RLHAGET-MLPGSTERILSITG----VADALHIAVYYVGATLLEHPDRGSNNLPYRP 251
Query: 479 DHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGS 538
+ + L PS+ GS + S+S L +LS +SP
Sbjct: 252 AAVNRA--------LTPSL-------------VGSPLNSPSASML----ALSATNSP--- 283
Query: 539 MSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS---- 594
+ +S L GL T ++ +P + VG +IGK G + IR++S + I++ + +
Sbjct: 284 -KALASVLTPGL---QTQQIFIPNDLVGCIIGKGGQKINEIRQLSASHIKIMERNAGIAA 339
Query: 595 --SRGDRVALISGTPEQKRAAENLI 617
S +R+ I+G P + A L+
Sbjct: 340 GGSGSERLVTITGPPPNIQMAVTLL 364
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 91/205 (44%), Gaps = 48/205 (23%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTK-DNRDECVITVTAI-------- 360
IR + P +++G +IG+ G IK I++ASGA++ +T E ++++T +
Sbjct: 170 IRFIIPNSRMGAIIGRQGSKIKEIQEASGARLHAGETMLPGSTERILSITGVADALHIAV 229
Query: 361 --------ESPD------DIKSMAVEAVL---LLQTKINDEDDDTV-------------- 389
E PD + AV L L+ + +N +
Sbjct: 230 YYVGATLLEHPDRGSNNLPYRPAAVNRALTPSLVGSPLNSPSASMLALSATNSPKALASV 289
Query: 390 ------TIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCA--DANDELVE 441
T ++ + + ++GCIIGK G INEIR+ + + ++I + + A ++ LV
Sbjct: 290 LTPGLQTQQIFIPNDLVGCIIGKGGQKINEIRQLSASHIKIMERNAGIAAGGSGSERLVT 349
Query: 442 VVGEVGSVRDALVQIILRLRDDALK 466
+ G +++ A+ + RL + ++
Sbjct: 350 ITGPPPNIQMAVTLLYQRLEQEKMR 374
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 78/364 (21%), Positives = 149/364 (40%), Gaps = 94/364 (25%)
Query: 51 VIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDV------EVDDEFND 104
+IGK G+ IN IR+ + AR+ + + P +R++T+ + ++DE D
Sbjct: 99 IIGKQGRHINEIRELSNARLNISESIPSNPERILTVSGALDAVSKAFGLLVRRINDEPFD 158
Query: 105 KEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKR 164
+ L ++ A ++ ++P+S+ IIG+ G+ IK
Sbjct: 159 QPSLPGSRAASIR--------------------------FIIPNSRMGAIIGRQGSKIKE 192
Query: 165 LRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDI 224
++ + + A E + E + I+G ++A+ A++ + A + + R
Sbjct: 193 IQEASGARLH-----AGETMLPGSTE--RILSITGVADALHIAVYYVGATLLEHPDRGS- 244
Query: 225 PLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSV-PSILGAA-RVPDLQGYADT 282
+++P Y P + +R++ PS++G+ P A +
Sbjct: 245 ----------------NNLP-YRPAAV---------NRALTPSLVGSPLNSPSASMLALS 278
Query: 283 GNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQID 342
P +L S L Q++++ I P + +G +IGKGG I IRQ S + I
Sbjct: 279 ATNSPK-----ALASVLTPGLQTQQIFI----PNDLVGCIIGKGGQKINEIRQLSASHIK 329
Query: 343 VDDTK------DNRDECVITVTAIESPDDIKSMAVEAVLLLQTKINDEDDDTVTIRLLVS 396
+ + + E ++T+T P +I+ AV LL ++ E +RL S
Sbjct: 330 IMERNAGIAAGGSGSERLVTITG--PPPNIQ----MAVTLLYQRLEQEK-----MRLAHS 378
Query: 397 SKVI 400
S I
Sbjct: 379 SPAI 382
>gi|408395856|gb|EKJ75028.1| hypothetical protein FPSE_04740 [Fusarium pseudograminearum CS3096]
Length = 372
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 149/338 (44%), Gaps = 56/338 (16%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
+L +R + + G +IGKGG + +R +G + V + V+T+T D I
Sbjct: 46 QLTLRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTITG--GCDAI 103
Query: 367 -KSMAVEAVLLLQTKIND------EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
++ A+ A LL+ + + T I+LL+S +G IIG+ G I I+ +
Sbjct: 104 SRAYAIVARALLEGAPAMGMGGVVQSNGTHPIKLLISHNQMGTIIGRQGLKIKHIQDASG 163
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGAD 479
+ K P+ + + +VEV G ++ A+ +I L DD
Sbjct: 164 VRMVAQKEMLPQ---STERIVEVQGTPEGIQRAIWEICKCLVDD---------------- 204
Query: 480 HIYSSGTGISM-PPLLPSIPPVGPLG-----YDQ---RADSGSGIGMLSSSSLYGYGS-L 529
+ GTG + P++ + P ++Q R+D G ++ + G G+
Sbjct: 205 --WQRGTGTVLYNPVVRTQPSSSGSTSGGAGFNQGSGRSDYGGSPRVMRT----GNGADF 258
Query: 530 SMGDS-PYGSMSSYSSKLYGGLPPPL--------TLEVLVPANAVGKVIGKAGSNLANIR 580
S G S PY S + L G PP T + +PA+ VG +IG+AGS ++ IR
Sbjct: 259 SNGSSRPYNRRSDSDAALRG--PPTHDENGEEIQTQNISIPADMVGCIIGRAGSKISEIR 316
Query: 581 KISGATIEMSDS-KSSRGDRVALISGTPEQKRAAENLI 617
K SGA I ++ + G+R+ I GT + +A L+
Sbjct: 317 KTSGARISIAKAPHDETGERMFTIMGTAKANESALFLL 354
>gi|355689346|gb|AER98803.1| far upstream element binding protein 3 [Mustela putorius furo]
Length = 450
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 138/341 (40%), Gaps = 42/341 (12%)
Query: 315 PFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDE--CVITVT--AIESPDDIKSMA 370
P +G +IG+GG I I+ SG +I + E CV+T T +IE +
Sbjct: 85 PDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPESIEQAKRLLGQI 144
Query: 371 VEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKAD-VRISKGDK 429
V+ ND D ++ +L+ + +G +IGK G I ++++RT V I G
Sbjct: 145 VDRCRNGPGFHNDIDGNSTIQEILIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPL 204
Query: 430 PKCADANDELVEVVGEVGSVRDALVQIILRLRDDA-LKDRDGSRNPPVGADHIYSS---- 484
P AD + +V R+ +++II R +D A + G G I S
Sbjct: 205 PTGADKPLRITGDPFKVQQAREMVLEII-REKDQADFRGVRGDFGARAGGGSIEVSVPRF 263
Query: 485 --------------------GTGISMPP---LLP--SIPPVGPLGYDQRADSGSGIGMLS 519
G I P + P + +GP Q A +L+
Sbjct: 264 AVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPERAAQVMGPPDRCQHAAHVINELILT 323
Query: 520 SSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANI 579
+ G+G L++ +S GG+ + VPA+ G VIGK G N+ +I
Sbjct: 324 AQERDGFGGLAVARGRGRGRGDWSVGAPGGI---QEITYTVPADKCGLVIGKGGENIKSI 380
Query: 580 RKISGATIEMSDSKSSRGD---RVALISGTPEQKRAAENLI 617
+ SGA +E+ + D R+ I G P+Q A +LI
Sbjct: 381 NQQSGAHVELQRNPPPSTDPNLRMFTIRGIPQQIEVARHLI 421
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%)
Query: 554 LTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAA 613
+T E VP VG +IG+ G ++ I+ SG I+++ S +R +++GTPE A
Sbjct: 78 ITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPESIEQA 137
Query: 614 ENLI 617
+ L+
Sbjct: 138 KRLL 141
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 74/164 (45%), Gaps = 24/164 (14%)
Query: 44 PDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFN 103
PD ++G +IG+ G+ I+ I+ E+ ++++ G +R +
Sbjct: 85 PDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTG--------------- 129
Query: 104 DKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIK 163
E + A+ L ++ N D D +E IL+P+S+ +IGK G TIK
Sbjct: 130 TPESIEQAKRLLGQIVDRCRNGPGFHNDIDGNSTIQE---ILIPASKVGLVIGKGGETIK 186
Query: 164 RLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKA 207
+L+ +T + V +D PT + D + I+G+ V++A
Sbjct: 187 QLQERTGVKM-VMIQDGPLPTGA-----DKPLRITGDPFKVQQA 224
>gi|340914749|gb|EGS18090.1| putative pab1-binding protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 484
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 91/416 (21%), Positives = 164/416 (39%), Gaps = 89/416 (21%)
Query: 18 GKNQKRRINEKDEKGNEESVIY-RILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPF 76
G N + + N +E S I+ R + ++IGK G+ + IRQ + AR V D
Sbjct: 105 GSNTQAQSNPPPAAHDETSWIHIRAVISSPEAATIIGKGGENVTKIRQMSGARCTVSDYQ 164
Query: 77 PGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKR 136
GA +R++T+ V DA+ K I + N N+
Sbjct: 165 KGAVERILTVSGIV----------------------DAVAKAFGLIIRTLNNEPLNEPSN 202
Query: 137 KEKEE--CQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSC-AMEFDN 193
+ + ++L+P +IIGK GA IK ++ + + +AS+ SC + +
Sbjct: 203 QHSKTYPLRLLIPHVLIGSIIGKGGARIKEIQEASGARL-----NASD---SCLPLSTER 254
Query: 194 FVLISGESEAVKKALFAISAIMY-----KFSPREDIPLETTVREAPPSIIIPSDVPIY-- 246
+++ G ++AV A + + + + +F T ++ V Y
Sbjct: 255 SLVVMGVADAVHIATYYVGSTLLEQLNERFGGAAASAYATRSGGPVGAVPGGMQVIPYNP 314
Query: 247 -PPGGLYPN----------------------------ADPILPSRSVPSILGAARVPDLQ 277
P GG Y N A P+ P+ ++P GA
Sbjct: 315 QPAGGHYGNRDAYYRARPDPRAHHMPPPPYAQPYGHPAHPVHPAAAMPMHYGAT---PAA 371
Query: 278 GYADTGNTWPVYSTGLSLVSGLVGAS---------QSEELVIRVLCPFNKIGRVIGKGGG 328
GY + P + G VG + + ++ P + +G +IGKGG
Sbjct: 372 GYGPAPHVQPPH-VGHPAAHPHVGPHGQPVAGAHMPGQTITQQIYIPNDMVGAIIGKGGQ 430
Query: 329 TIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKINDE 384
I IRQ SG+ I +++ +DN +E ++T+T E + + A+ +L +++ +E
Sbjct: 431 KINEIRQISGSVIKINEPQDNSNERLVTITGTEECNRM------ALYMLYSRLENE 480
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 67/129 (51%), Gaps = 12/129 (9%)
Query: 304 QSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESP 363
++ + IR + + +IGKGG + IRQ SGA+ V D + E ++TV+ I
Sbjct: 121 ETSWIHIRAVISSPEAATIIGKGGENVTKIRQMSGARCTVSDYQKGAVERILTVSGI--- 177
Query: 364 DDIKSMAVEAVLLLQTKIND-------EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
+ ++A L+++T N+ + T +RLL+ +IG IIGK G+ I EI++
Sbjct: 178 --VDAVAKAFGLIIRTLNNEPLNEPSNQHSKTYPLRLLIPHVLIGSIIGKGGARIKEIQE 235
Query: 417 RTKADVRIS 425
+ A + S
Sbjct: 236 ASGARLNAS 244
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 41/64 (64%)
Query: 554 LTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAA 613
+T ++ +P + VG +IGK G + IR+ISG+ I++++ + + +R+ I+GT E R A
Sbjct: 410 ITQQIYIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQDNSNERLVTITGTEECNRMA 469
Query: 614 ENLI 617
++
Sbjct: 470 LYML 473
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 387 DTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEV 446
T+T ++ + + ++G IIGK G INEIR+ + + ++I++ ++N+ LV + G
Sbjct: 408 QTITQQIYIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQD----NSNERLVTITGTE 463
Query: 447 GSVRDALVQIILRLRDD 463
R AL + RL ++
Sbjct: 464 ECNRMALYMLYSRLENE 480
>gi|440907529|gb|ELR57670.1| RNA-binding protein Nova-2, partial [Bos grunniens mutus]
Length = 298
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 86/175 (49%), Gaps = 21/175 (12%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD-----NRDECVITVTAIE 361
E ++VL P G +IGKGG TI +++ +GA I + +KD C++ TA E
Sbjct: 4 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTA-E 62
Query: 362 SPDDIKSMAVEAVL-------------LLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSG 408
+ + + S E V +LQ + D +L+V + G IIGK G
Sbjct: 63 ALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGG 122
Query: 409 SIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDD 463
+ + + +++ A V++S+ KP+ + + +V V GE V A+ I+ ++++D
Sbjct: 123 ATVKAVMEQSGAWVQLSQ--KPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQED 175
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 137/315 (43%), Gaps = 71/315 (22%)
Query: 34 EESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV---DPFPGAKDRVVTIYSHV 90
E ++L P GS+IGK G+ I +++ET A +K+ D +PG +RV +
Sbjct: 2 EGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQG-- 59
Query: 91 KDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQ 150
E + F E + A+ K + N + T + R ++ +++VP+S
Sbjct: 60 -TAEALNAVHSF-IAEKVREIPQAMTKPE--VVNILQPQTTMNPDR--AKQAKLIVPNST 113
Query: 151 SANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFA 210
+ IIGK GAT+K + ++ ++++ K + V +SGE E V K A
Sbjct: 114 AGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQ------ERVVTVSGEPEQVHK---A 164
Query: 211 ISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPN-ADPILPSRSVPSILG 269
+SAI+ K V+E P S S + I Y N A P+ + S P+ L
Sbjct: 165 VSAIVQK------------VQEDPQS---SSCLNIS-----YANVAGPV--ANSNPTGLT 202
Query: 270 AARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGT 329
A ++ A++S + ++ + P N +G ++GKGG T
Sbjct: 203 AEKL----------------------------AAESAKELVEIAVPENLVGAILGKGGKT 234
Query: 330 IKSIRQASGAQIDVD 344
+ ++ +GA+I +
Sbjct: 235 LVEYQELTGARIQIS 249
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 42/69 (60%), Gaps = 7/69 (10%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS---SRGDRVALISGTPEQKRA 612
L+VL+P+ A G +IGK G + ++K +GATI++S SK +RV L+ GT E
Sbjct: 7 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAE---- 62
Query: 613 AENLIQAFI 621
A N + +FI
Sbjct: 63 ALNAVHSFI 71
Score = 42.0 bits (97), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 5/66 (7%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS----SRGDRVALISGTPEQKR 611
+E+ VP N VG ++GK G L ++++GA I++S +R RV I+G+P +
Sbjct: 215 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVT-ITGSPAATQ 273
Query: 612 AAENLI 617
AA+ LI
Sbjct: 274 AAQYLI 279
>gi|354490712|ref|XP_003507500.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
[Cricetulus griseus]
Length = 731
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/329 (21%), Positives = 151/329 (45%), Gaps = 53/329 (16%)
Query: 298 GLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITV 357
G V + +L +R+L P +G +IGK G TI++I + + ++IDV K+N +
Sbjct: 338 GSVSKQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHR-KENTGAAEKPI 396
Query: 358 TAIESPDDIKSMAVEAVLLLQTKINDEDDDT-----VTIRLLVSSKVIGCIIGKSGSIIN 412
T + +P+ S A +++L + ++ E DT V +++L + +G +IGK G +
Sbjct: 397 TILSTPEG-ASAACKSILEI---MHKEAQDTKLTEEVPLKILAHNNFVGRLIGKEGRNLK 452
Query: 413 EIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSR 472
+I + T + IS + + + + V G V + A +I+ ++R+ D
Sbjct: 453 KIEQDTDTKITISPLQELTLYNP-ERTITVKGNVETCARAEEEIMKKIRESYEND----- 506
Query: 473 NPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMG 532
+ + ++ + L+P + + + +G+ +S +
Sbjct: 507 ---IASMNLQAH--------LIPGL-------------NLNALGLFPPTSGMPPPTSGPP 542
Query: 533 DS---PYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEM 589
+ PY ++ T+ + +PA +VG +IGK G ++ + + +GA+I++
Sbjct: 543 STMTPPYPQFEQSETE---------TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKI 593
Query: 590 SDSKSSRGD-RVALISGTPEQKRAAENLI 617
+ +++ R+ +I+G PE + A+ I
Sbjct: 594 APAEAPDAKVRMVIITGPPEAQFKAQGRI 622
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 86/407 (21%), Positives = 161/407 (39%), Gaps = 75/407 (18%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKEDVEV 98
R+L P +G++IGK G I +I ++T++++ V GA ++ +TI S
Sbjct: 351 RLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENTGAAEKPITILS---------- 400
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
E AA ++L++ A D K E+ +IL ++ +IGK
Sbjct: 401 -----TPEGASAACKSILEIMHKEAQ--------DTKLTEEVPLKILAHNNFVGRLIGKE 447
Query: 159 GATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKF 218
G +K++ T T I ++P L + E K A
Sbjct: 448 GRNLKKIEQDTDTKITISP-------------LQELTLYNPERTITVKGNVETCA----- 489
Query: 219 SPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQG 278
R + + +RE+ + I ++ + GL NA + P S + +
Sbjct: 490 --RAEEEIMKKIRESYENDIASMNLQAHLIPGLNLNALGLFPPTSGMPPPTSGPPSTMT- 546
Query: 279 YADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASG 338
+P + QSE + + P +G +IGK G IK + + +G
Sbjct: 547 -----PPYPQFE-------------QSETETVHLFIPALSVGAIIGKQGQHIKQLSRFAG 588
Query: 339 AQIDV--DDTKDNRDECVITVTAIESPDDIKSMA---VEAVLLLQTKINDEDDDTVTIRL 393
A I + + D + VI I P + + A + + + ++ +++ + +
Sbjct: 589 ASIKIAPAEAPDAKVRMVI----ITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHI 644
Query: 394 LVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELV 440
V S G +IGK G +NE++ + A+V + + P D N+++V
Sbjct: 645 RVPSFAAGRVIGKGGKTVNELQNLSSAEVVVPRDQTP---DENNQVV 688
>gi|380026049|ref|XP_003696774.1| PREDICTED: RNA-binding protein Nova-2-like isoform 1 [Apis florea]
Length = 514
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 90/169 (53%), Gaps = 18/169 (10%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD-----NRDECVITVTAIESPD 364
++VL P G +IGKGG TI +++ +GA++ + + D C+IT ++E+
Sbjct: 47 LKVLVPGVAAGAIIGKGGDTIAQLQKDTGARVKMSKSHDFYPGTTERVCLIT-GSLEAIM 105
Query: 365 DIKSMAVEAV-----LLLQTKINDEDDDTVT-----IRLLVSSKVIGCIIGKSGSIINEI 414
+ ++ + L L+T ++ E T +++LV + G IIGK+G+ I +I
Sbjct: 106 AVMDFIMDKIREKPDLTLKTTVDFESGKTTAERDKQVKILVPNSTAGMIIGKAGNYIKQI 165
Query: 415 RKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDD 463
++ + V+IS+ K K + + V+GE + R+AL+ I+ ++ DD
Sbjct: 166 KEECGSYVQISQ--KAKDVSLQERCITVIGEKENNRNALMMILAKVADD 212
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 90/185 (48%), Gaps = 20/185 (10%)
Query: 32 GNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV---DPFPGAKDRVVTIYS 88
G + + ++L P G++IGK G I ++++T ARVK+ D +PG +RV I
Sbjct: 40 GGDGTYHLKVLVPGVAAGAIIGKGGDTIAQLQKDTGARVKMSKSHDFYPGTTERVCLITG 99
Query: 89 HVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPS 148
++ + V D DK + D LK + A + DK+ K ILVP+
Sbjct: 100 SLE--AIMAVMDFIMDK--IREKPDLTLKTTVDFESGKTTA-ERDKQVK------ILVPN 148
Query: 149 SQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKAL 208
S + IIGKAG IK+++ + + +++ S+ +++ + + + GE E + AL
Sbjct: 149 STAGMIIGKAGNYIKQIKEECGSYVQI-----SQKAKDVSLQ-ERCITVIGEKENNRNAL 202
Query: 209 FAISA 213
I A
Sbjct: 203 MMILA 207
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS---SRGDRVALISGTPEQKRA 612
L+VLVP A G +IGK G +A ++K +GA ++MS S +RV LI+G+ E A
Sbjct: 47 LKVLVPGVAAGAIIGKGGDTIAQLQKDTGARVKMSKSHDFYPGTTERVCLITGSLEAIMA 106
Query: 613 AENLI 617
+ I
Sbjct: 107 VMDFI 111
>gi|417409319|gb|JAA51170.1| Putative polyc-binding alphacp-1, partial [Desmodus rotundus]
Length = 283
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 94/178 (52%), Gaps = 16/178 (8%)
Query: 293 LSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDE 352
L++ +G+ + + L IR+L ++G +IGK G ++K IR+ SGA+I++ + N E
Sbjct: 8 LAMDAGVTESGLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPE 65
Query: 353 CVITVTAIESPDDIKSMAVEAVL-LLQTKINDEDDDT-------VTIRLLVSSKVIGCII 404
+IT+T P + A ++ L+ IN ++ VT+RL+V + G +I
Sbjct: 66 RIITLTG---PTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLI 122
Query: 405 GKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRD 462
GK G I EIR+ T A V+++ P ++ + + + G SV + + QI L + +
Sbjct: 123 GKGGCKIKEIRESTGAQVQVAGDMLP---NSTERAITIAGVPQSVTECVKQICLVMLE 177
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 9/92 (9%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+TIRLL+ K +G IIGK G + IR+ + A + IS+G+ P + ++ + G
Sbjct: 22 TLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCP------ERIITLTGPTN 75
Query: 448 SVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
++ A II +L +D ++ + + PPV
Sbjct: 76 AIFKAFAMIIDKLEEDINSSMTNSTAASRPPV 107
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 69/151 (45%), Gaps = 29/151 (19%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH 89
E G ++ R+L +GS+IGK G+ + IR+E+ AR+ + + +R++T
Sbjct: 16 ESGLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIIT---- 69
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAV-----ANATDNDKKRKEKEECQI 144
L +A+ K A I + + ++ T++ + ++
Sbjct: 70 ------------------LTGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRL 111
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKV 175
+VP++Q ++IGK G IK +R T ++V
Sbjct: 112 VVPATQCGSLIGKGGCKIKEIRESTGAQVQV 142
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 552 PPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMS-DSKSSRGDRVALISGTPE 608
PP+TL ++VPA G +IGK G + IR+ +GA ++++ D + +R I+G P+
Sbjct: 105 PPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGVPQ 162
>gi|340718655|ref|XP_003397779.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Bombus
terrestris]
Length = 466
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 86/176 (48%), Gaps = 12/176 (6%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSM 369
+R+L P G +IGKGG I +R A I V D E V+T+++ + P ++ +
Sbjct: 63 LRLLIPSKVAGSIIGKGGQNITKLRSQYKASIIVPDCPG--PERVLTISS-DLPTVLQVL 119
Query: 370 AVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDK 429
E V L+ + D + +R+LV GCIIGK G I E+R++T A ++I
Sbjct: 120 N-EVVPNLEENGSRHGSDEIDVRMLVHQSQAGCIIGKGGLKIKELREKTGARIKIYSH-- 176
Query: 430 PKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNP--PVGADHIYS 483
C + D L+ + G+ + + + ++I ++ LK G NP P D Y+
Sbjct: 177 -CCPHSTDRLISICGKPNTCIECIRELIATIKTSPLK---GVNNPYDPHNFDDYYA 228
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 86/196 (43%), Gaps = 39/196 (19%)
Query: 26 NEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVT 85
+++ +G++E R+L P V GS+IGK G+ I +R + +A + V D PG +RV+T
Sbjct: 53 HKRYRQGDDE---LRLLIPSKVAGSIIGKGGQNITKLRSQYKASIIVPD-CPGP-ERVLT 107
Query: 86 IYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKE-ECQI 144
I S L V + V N +N + E + ++
Sbjct: 108 ISSD-------------------------LPTVLQVLNEVVPNLEENGSRHGSDEIDVRM 142
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAV 204
LV SQ+ IIGK G IK LR KT IK+ +H C D + I G+
Sbjct: 143 LVHQSQAGCIIGKGGLKIKELREKTGARIKIY-------SHCCPHSTDRLISICGKPNTC 195
Query: 205 KKALFAISAIMYKFSP 220
+ + + A + K SP
Sbjct: 196 IECIRELIATI-KTSP 210
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%)
Query: 555 TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAE 614
T +V +P + G +IGK G+ + +R SGA I + + S DR+ I+G P Q + A+
Sbjct: 393 TTQVTIPKDLAGAIIGKGGARIRKVRSDSGAGITIDEPLSGSNDRIITITGLPSQIQMAQ 452
Query: 615 NLIQAFI 621
L+Q +
Sbjct: 453 YLLQQSV 459
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 6/76 (7%)
Query: 311 RVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMA 370
+V P + G +IGKGG I+ +R SGA I +D+ ++ +IT+T + P I+
Sbjct: 395 QVTIPKDLAGAIIGKGGARIRKVRSDSGAGITIDEPLSGSNDRIITITGL--PSQIQM-- 450
Query: 371 VEAVLLLQTKINDEDD 386
A LLQ +++ D
Sbjct: 451 --AQYLLQQSVHENAD 464
>gi|410910370|ref|XP_003968663.1| PREDICTED: RNA-binding protein Nova-1-like [Takifugu rubripes]
Length = 496
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 85/174 (48%), Gaps = 19/174 (10%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD-----NRDECVI--TVTA 359
E ++VL P G +IGKGG TI +++ +GA I + +KD C+I TV A
Sbjct: 56 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEA 115
Query: 360 IESPDDI----------KSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGS 409
+ + + E V +LQ + D +L+V + G IIGK G+
Sbjct: 116 LNGVHNFIAEKVREMPQSTQKTEPVSILQPQTTVNPDRVKQAKLIVPNSTAGLIIGKGGA 175
Query: 410 IINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDD 463
+ + +++ A V++S+ KP+ + + +V + GE R A+ I+ ++++D
Sbjct: 176 TVKAVMEQSGAWVQLSQ--KPEGINLQERVVTISGEPEQNRKAVEIIVQKIQED 227
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 87/199 (43%), Gaps = 45/199 (22%)
Query: 27 EKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV---DPFPGAKDRV 83
++ G E ++L P GS+IGK G+ I +++ET A +K+ D +PG +RV
Sbjct: 47 KRTNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERV 106
Query: 84 VTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRK------ 137
I V +AL VH IA V + +K +
Sbjct: 107 CLIQGTV----------------------EALNGVHNFIAEKVREMPQSTQKTEPVSILQ 144
Query: 138 --------EKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAM 189
++ +++VP+S + IIGK GAT+K + ++ ++++ K +
Sbjct: 145 PQTTVNPDRVKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKP-----EGINL 199
Query: 190 EFDNFVLISGESEAVKKAL 208
+ + V ISGE E +KA+
Sbjct: 200 Q-ERVVTISGEPEQNRKAV 217
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS---SRGDRVALISGTPEQKRA 612
L+VL+P+ A G +IGK G + ++K +GATI++S SK +RV LI GT E
Sbjct: 59 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNG 118
Query: 613 AENLI 617
N I
Sbjct: 119 VHNFI 123
>gi|451172115|ref|NP_001094011.1| RNA-binding protein Nova-1 [Rattus norvegicus]
Length = 482
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 88/174 (50%), Gaps = 19/174 (10%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD-----NRDECVI--TVTA 359
+ ++VL P G +IGKGG TI +++ +GA I + +KD C+I T+ A
Sbjct: 48 QYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTIEA 107
Query: 360 IES-----PDDIKSM-----AVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGS 409
+ + + I+ M E V +LQ + D ++++V + G IIGK G+
Sbjct: 108 LNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQVKIIVPNSTAGLIIGKGGA 167
Query: 410 IINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDD 463
+ I +++ A V++S+ KP + + +V V GE R A+ II ++++D
Sbjct: 168 TVKAIMEQSGAWVQLSQ--KPDGINLQERVVTVSGEPEQNRKAVELIIQKIQED 219
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 85/199 (42%), Gaps = 45/199 (22%)
Query: 27 EKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV---DPFPGAKDRV 83
++ G + ++L P GS+IGK G+ I +++ET A +K+ D +PG +RV
Sbjct: 39 KRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERV 98
Query: 84 VTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRK------ 137
I + +AL VH IA + N K +
Sbjct: 99 CLIQGTI----------------------EALNAVHGFIAEKIREMPQNVAKTEPVSILQ 136
Query: 138 --------EKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAM 189
++ +I+VP+S + IIGK GAT+K + ++ ++++ K P
Sbjct: 137 PQTTVNPDRIKQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQK----PDGINLQ 192
Query: 190 EFDNFVLISGESEAVKKAL 208
E V +SGE E +KA+
Sbjct: 193 E--RVVTVSGEPEQNRKAV 209
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 41/69 (59%), Gaps = 7/69 (10%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS---SRGDRVALISGTPEQKRA 612
L+VL+P+ A G +IGK G + ++K +GATI++S SK +RV LI GT E
Sbjct: 51 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTIE---- 106
Query: 613 AENLIQAFI 621
A N + FI
Sbjct: 107 ALNAVHGFI 115
Score = 42.0 bits (97), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS---SRGDRVALISGTPEQKRA 612
+E+ VP N VG ++GK G L ++++GA I++S +R I+GTP +A
Sbjct: 399 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAATQA 458
Query: 613 AENLI 617
A+ LI
Sbjct: 459 AQYLI 463
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS--SRGDRVALISGTPEQKRAA 613
++++VP + G +IGK G+ + I + SGA +++S + +RV +SG PEQ R A
Sbjct: 149 VKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGINLQERVVTVSGEPEQNRKA 208
Query: 614 ENLI 617
LI
Sbjct: 209 VELI 212
>gi|340714094|ref|XP_003395567.1| PREDICTED: RNA-binding protein Nova-2-like [Bombus terrestris]
gi|350427987|ref|XP_003494948.1| PREDICTED: RNA-binding protein Nova-2-like [Bombus impatiens]
Length = 514
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 90/169 (53%), Gaps = 18/169 (10%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD-----NRDECVITVTAIESPD 364
++VL P G +IGKGG TI +++ +GA++ + + D C+IT ++E+
Sbjct: 47 LKVLVPGVAAGAIIGKGGDTIAQLQKDTGARVKMSKSHDFYPGTTERVCLIT-GSLEAIM 105
Query: 365 DIKSMAVEAV-----LLLQTKINDEDDDTVT-----IRLLVSSKVIGCIIGKSGSIINEI 414
+ ++ + L L+T ++ E T +++LV + G IIGK+G+ I +I
Sbjct: 106 AVMDFIMDKIREKPDLTLKTTVDFESGKTTAERDKQVKILVPNSTAGMIIGKAGNYIKQI 165
Query: 415 RKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDD 463
++ + V+IS+ K K + + V+GE + R+AL+ I+ ++ DD
Sbjct: 166 KEECGSYVQISQ--KAKDVSLQERCITVIGEKENNRNALMMILAKVADD 212
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 90/185 (48%), Gaps = 20/185 (10%)
Query: 32 GNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV---DPFPGAKDRVVTIYS 88
G + + ++L P G++IGK G I ++++T ARVK+ D +PG +RV I
Sbjct: 40 GGDGTYHLKVLVPGVAAGAIIGKGGDTIAQLQKDTGARVKMSKSHDFYPGTTERVCLITG 99
Query: 89 HVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPS 148
++ + V D DK + D LK + A + DK+ K ILVP+
Sbjct: 100 SLE--AIMAVMDFIMDK--IREKPDLTLKTTVDFESGKTTA-ERDKQVK------ILVPN 148
Query: 149 SQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKAL 208
S + IIGKAG IK+++ + + +++ S+ +++ + + + GE E + AL
Sbjct: 149 STAGMIIGKAGNYIKQIKEECGSYVQI-----SQKAKDVSLQ-ERCITVIGEKENNRNAL 202
Query: 209 FAISA 213
I A
Sbjct: 203 MMILA 207
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS---SRGDRVALISGTPEQKRA 612
L+VLVP A G +IGK G +A ++K +GA ++MS S +RV LI+G+ E A
Sbjct: 47 LKVLVPGVAAGAIIGKGGDTIAQLQKDTGARVKMSKSHDFYPGTTERVCLITGSLEAIMA 106
Query: 613 AENLI 617
+ I
Sbjct: 107 VMDFI 111
>gi|125597123|gb|EAZ36903.1| hypothetical protein OsJ_21247 [Oryza sativa Japonica Group]
Length = 114
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 49/69 (71%)
Query: 555 TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAE 614
TLEV++P +AV + +AGS LA I ++SGAT+ ++D + ++V ISGTPEQ A+
Sbjct: 38 TLEVVIPKSAVASLTMRAGSKLAQISEMSGATVTLADERPDAIEKVVRISGTPEQADKAQ 97
Query: 615 NLIQAFIMA 623
+L+Q FI++
Sbjct: 98 SLLQGFILS 106
>gi|328784994|ref|XP_003250531.1| PREDICTED: RNA-binding protein Nova-2-like [Apis mellifera]
Length = 514
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 90/169 (53%), Gaps = 18/169 (10%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD-----NRDECVITVTAIESPD 364
++VL P G +IGKGG TI +++ +GA++ + + D C+IT ++E+
Sbjct: 47 LKVLVPGVAAGAIIGKGGDTIAQLQKDTGARVKMSKSHDFYPGTTERVCLIT-GSLEAIM 105
Query: 365 DIKSMAVEAV-----LLLQTKINDEDDDTVT-----IRLLVSSKVIGCIIGKSGSIINEI 414
+ ++ + L L+T ++ E T +++LV + G IIGK+G+ I +I
Sbjct: 106 AVMDFIMDKIREKPDLTLKTTVDFESGKTTAERDKQVKILVPNSTAGMIIGKAGNYIKQI 165
Query: 415 RKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDD 463
++ + V+IS+ K K + + V+GE + R+AL+ I+ ++ DD
Sbjct: 166 KEECGSYVQISQ--KAKDVSLQERCITVIGEKENNRNALMMILAKVADD 212
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 90/185 (48%), Gaps = 20/185 (10%)
Query: 32 GNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV---DPFPGAKDRVVTIYS 88
G + + ++L P G++IGK G I ++++T ARVK+ D +PG +RV I
Sbjct: 40 GGDGTYHLKVLVPGVAAGAIIGKGGDTIAQLQKDTGARVKMSKSHDFYPGTTERVCLITG 99
Query: 89 HVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPS 148
++ + V D DK + D LK + A + DK+ K ILVP+
Sbjct: 100 SLE--AIMAVMDFIMDK--IREKPDLTLKTTVDFESGKTTA-ERDKQVK------ILVPN 148
Query: 149 SQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKAL 208
S + IIGKAG IK+++ + + +++ S+ +++ + + + GE E + AL
Sbjct: 149 STAGMIIGKAGNYIKQIKEECGSYVQI-----SQKAKDVSLQ-ERCITVIGEKENNRNAL 202
Query: 209 FAISA 213
I A
Sbjct: 203 MMILA 207
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS---SRGDRVALISGTPEQKRA 612
L+VLVP A G +IGK G +A ++K +GA ++MS S +RV LI+G+ E A
Sbjct: 47 LKVLVPGVAAGAIIGKGGDTIAQLQKDTGARVKMSKSHDFYPGTTERVCLITGSLEAIMA 106
Query: 613 AENLI 617
+ I
Sbjct: 107 VMDFI 111
>gi|358343600|ref|XP_003635888.1| Poly(rC)-binding protein [Medicago truncatula]
gi|358344098|ref|XP_003636130.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355501823|gb|AES83026.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355502065|gb|AES83268.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 241
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 114/235 (48%), Gaps = 35/235 (14%)
Query: 397 SKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQI 456
S +G I+GK G I+ IR + +++R+ P CA ++EL+ + G + +AL +I
Sbjct: 28 SSQVGAIVGKGGKNISNIRNNSGSNIRVCPA--PHCAAKDEELILITGGYRCIENALRKI 85
Query: 457 ILRLRDDALKDR---DGSRNP--PVGADHIYS---SGTGISMPPLLPSIPPVGPLGYDQR 508
+R++ L + + P P+ D + S + S P +PP Y +
Sbjct: 86 TSIIRNNPLTNEVLAEARIKPSFPLNKDTVRSKFITRKKSSFP--FARVPPQNAGVYQAK 143
Query: 509 --ADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVG 566
++G L + G G++ +++ ++ T+E++V + G
Sbjct: 144 KVTENGESHTNLIENVEPGRGNI---------VATVTNT---------TVEIIVSEHVFG 185
Query: 567 KVIGKAGSNLANIRKISGATIEMSD--SKSSRGDRVALISGTPEQKRAAENLIQA 619
V G+ G NL IR+ISGA + + D S + G +V +ISGTP+Q AA++L+QA
Sbjct: 186 SVYGEDGGNLDRIRQISGADVTVFDPSSTGTSGGKV-VISGTPDQTFAAQSLLQA 239
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 84/205 (40%), Gaps = 29/205 (14%)
Query: 148 SSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKA 207
SSQ I+GK G I +R+ + ++I+V P CA + + +LI+G ++ A
Sbjct: 28 SSQVGAIVGKGGKNISNIRNNSGSNIRVCPAP------HCAAKDEELILITGGYRCIENA 81
Query: 208 LFAISAIMYKFSPREDIPLETTVREAPP-------SIIIPSDVPIYPPGGLYPNADPILP 260
L I++I+ ++ E ++ + P S I +P + P +
Sbjct: 82 LRKITSIIRNNPLTNEVLAEARIKPSFPLNKDTVRSKFITRKKSSFPFARVPPQNAGVYQ 141
Query: 261 SRSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIG 320
++ V G + T V ++V+ + + + ++ + G
Sbjct: 142 AKKVTE----------NGESHTNLIENVEPGRGNIVATVTNTT------VEIIVSEHVFG 185
Query: 321 RVIGKGGGTIKSIRQASGAQIDVDD 345
V G+ GG + IRQ SGA + V D
Sbjct: 186 SVYGEDGGNLDRIRQISGADVTVFD 210
>gi|343427422|emb|CBQ70949.1| related to PBP2-PAB1 binding protein [Sporisorium reilianum SRZ2]
Length = 416
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 148/329 (44%), Gaps = 51/329 (15%)
Query: 303 SQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIES 362
+Q+ ++ +R L + +IGK G I IR S A++++ + E ++TV+
Sbjct: 108 TQATQISMRTLIVTSDASIIIGKSGKHINEIRDKSNARLNISEIIPGNPERILTVSG--- 164
Query: 363 PDDIKSMAVEAVLLLQTKINDEDDD--------TVTIRLLVSSKVIGCIIGKSGSIINEI 414
P D S +A L+ +INDE D +VTIR +V + +G +IGK GS I EI
Sbjct: 165 PLDAVS---KAFGLIVRRINDEPFDQPSVPGSKSVTIRFIVPNSRMGSVIGKQGSKIKEI 221
Query: 415 RKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNP 474
++ + A R++ G+ + + ++ + G +V A+ + L + +DR+ + P
Sbjct: 222 QEASGA--RLTAGEA-MLPGSTERVLSISGVADAVHIAVYYVGTILLEH--QDRNANNLP 276
Query: 475 PVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDS 534
Y G P P P P Q+ +GYG+ +
Sbjct: 277 -------YRPTAG--GPSTRPPAPGANPYAAPQQP--------------FGYGAPAPPFG 313
Query: 535 PYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSD--- 591
+ + + +L G T ++ +P + VG +IGK GS + IR +S + I++ +
Sbjct: 314 GAPAGAGGAPQLPPGS---QTQQIFIPNDLVGCIIGKGGSKINEIRSMSASHIKIMEPGA 370
Query: 592 ---SKSSRGDRVALISGTPEQKRAAENLI 617
+ S +R+ I+G P + A +L+
Sbjct: 371 GIAAGGSGNERLVTITGPPPNIQMAVSLL 399
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 143/344 (41%), Gaps = 74/344 (21%)
Query: 51 VIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCA 110
+IGKSGK IN IR ++ AR+ + + PG +R++T+ PL
Sbjct: 127 IIGKSGKHINEIRDKSNARLNISEIIPGNPERILTVSG------------------PL-- 166
Query: 111 AQDALLKVHAAIANAVANATDNDKKRKEKEECQI--LVPSSQSANIIGKAGATIKRLRSK 168
DA+ K I + + + + I +VP+S+ ++IGK G+ IK ++
Sbjct: 167 --DAVSKAFGLIVRRINDEPFDQPSVPGSKSVTIRFIVPNSRMGSVIGKQGSKIKEIQEA 224
Query: 169 TRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPR--EDIPL 226
+ ++T +A P + + + ISG ++AV A++ + I+ + R ++P
Sbjct: 225 --SGARLTAGEAMLPGST-----ERVLSISGVADAVHIAVYYVGTILLEHQDRNANNLPY 277
Query: 227 ETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTW 286
P+ PS P P G P A P P GY +
Sbjct: 278 R-------PTAGGPSTRPPAP--GANPYAAPQQPF----------------GYGAPAPPF 312
Query: 287 PVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDD- 345
G L SQ++++ I P + +G +IGKGG I IR S + I + +
Sbjct: 313 GGAPAGAGGAPQLPPGSQTQQIFI----PNDLVGCIIGKGGSKINEIRSMSASHIKIMEP 368
Query: 346 -----TKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKINDE 384
+ +E ++T+T P +I+ AV LL ++ E
Sbjct: 369 GAGIAAGGSGNERLVTITG--PPPNIQM----AVSLLYQRLEQE 406
Score = 42.4 bits (98), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 390 TIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISK--GDKPKCADANDELVEVVGEVG 447
T ++ + + ++GCIIGK GS INEIR + + ++I + N+ LV + G
Sbjct: 331 TQQIFIPNDLVGCIIGKGGSKINEIRSMSASHIKIMEPGAGIAAGGSGNERLVTITGPPP 390
Query: 448 SVRDALVQIILRLRDDALKDRDG 470
+++ A+ + RL + ++ G
Sbjct: 391 NIQMAVSLLYQRLEQEKMRLAQG 413
Score = 39.3 bits (90), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 6/81 (7%)
Query: 23 RRINEK--DEKG--NEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDP-FP 77
RRIN++ D+ +SV R + P+ +GSVIGK G I I++ + AR+ + P
Sbjct: 178 RRINDEPFDQPSVPGSKSVTIRFIVPNSRMGSVIGKQGSKIKEIQEASGARLTAGEAMLP 237
Query: 78 GAKDRVVTIYSHVKDKEDVEV 98
G+ +RV++I S V D + V
Sbjct: 238 GSTERVLSI-SGVADAVHIAV 257
>gi|255071283|ref|XP_002507723.1| predicted protein [Micromonas sp. RCC299]
gi|226522998|gb|ACO68981.1| predicted protein [Micromonas sp. RCC299]
Length = 287
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 131/317 (41%), Gaps = 76/317 (23%)
Query: 36 SVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKV---VDPFPGAKDRVVTIYSHVKD 92
++ + L PD GS+IGK G +N ++ +T +R+++ + FPG KDR+VT+Y
Sbjct: 2 NITLKFLLPDSAAGSIIGKGGATVNELQSQTGSRIQLSRATEVFPGTKDRIVTVYG---- 57
Query: 93 KEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSA 152
A L H I+ V D + + ++++P++
Sbjct: 58 -----------------TAPSILGAFHLMISKLV---RDGEGLVGGRPHVKLVIPNASCG 97
Query: 153 NIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAIS 212
IIG+ GATI+ ++ IK++ ++ P + + + I+G ++ V +A+ ++
Sbjct: 98 CIIGRGGATIRNFADDSQAEIKLSSQEHMLPGVN-----ERVLTITGANDRVLRAIALVA 152
Query: 213 AIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAAR 272
+ + E++ + PS +P +P + + AA
Sbjct: 153 TALSQDGCYEELI-------SRPSTYTIDGMP--------------MPYSGINNDFAAAV 191
Query: 273 VPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELV-IRVLCPFNKIGRVIGKGGGTIK 331
+++ G SQ +++ + + P IG V+GKGG TI
Sbjct: 192 NHNVEH----------------------GRSQDGDVISVAIDVPDEHIGAVLGKGGRTIS 229
Query: 332 SIRQASGAQIDVDDTKD 348
I+ SG +I V + D
Sbjct: 230 EIQITSGIRIKVSERGD 246
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 81/176 (46%), Gaps = 22/176 (12%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVD-------DTKDNRDECVITVTAI 360
+ ++ L P + G +IGKGG T+ ++ +G++I + TKD ++TV
Sbjct: 3 ITLKFLLPDSAAGSIIGKGGATVNELQSQTGSRIQLSRATEVFPGTKDR----IVTVYG- 57
Query: 361 ESPDDIKSMAVEAVLLLQTKINDEDDDTV----TIRLLVSSKVIGCIIGKSGSIINEIRK 416
+P + A L+ +K+ + + V ++L++ + GCIIG+ G+ I
Sbjct: 58 TAPSILG-----AFHLMISKLVRDGEGLVGGRPHVKLVIPNASCGCIIGRGGATIRNFAD 112
Query: 417 RTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSR 472
++A++++S + N+ ++ + G V A+ + L D + SR
Sbjct: 113 DSQAEIKLSS-QEHMLPGVNERVLTITGANDRVLRAIALVATALSQDGCYEELISR 167
>gi|148222190|ref|NP_001086143.1| neuro-oncological ventral antigen 1 [Xenopus laevis]
gi|49258011|gb|AAH74252.1| MGC84002 protein [Xenopus laevis]
Length = 484
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 88/174 (50%), Gaps = 19/174 (10%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD-----NRDECVI--TVTA 359
+ ++VL P G +IGKGG TI +++ +GA I + +KD C+I TV A
Sbjct: 49 QFFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEA 108
Query: 360 IES-----PDDIKSM-----AVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGS 409
+ + + I+ M E V +LQ + D ++++V + G IIGK G+
Sbjct: 109 LNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQVKIIVPNSTAGLIIGKGGA 168
Query: 410 IINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDD 463
+ + +++ A V++S+ KP + + +V V GE R A+ I+ ++++D
Sbjct: 169 TVKAVMEQSGAWVQLSQ--KPDGINLQERVVTVSGEPEQNRKAVELIVQKIQED 220
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 85/199 (42%), Gaps = 45/199 (22%)
Query: 27 EKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV---DPFPGAKDRV 83
++ G + ++L P GS+IGK G+ I +++ET A +K+ D +PG +RV
Sbjct: 40 KRTNTGEDGQFFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERV 99
Query: 84 VTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRK------ 137
I V +AL VH IA + N K +
Sbjct: 100 CLIQGTV----------------------EALNAVHGFIAEKIREMPQNVAKTEPVSILQ 137
Query: 138 --------EKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAM 189
++ +I+VP+S + IIGK GAT+K + ++ ++++ K P
Sbjct: 138 PQTTVNPDRIKQVKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQK----PDGINLQ 193
Query: 190 EFDNFVLISGESEAVKKAL 208
E V +SGE E +KA+
Sbjct: 194 E--RVVTVSGEPEQNRKAV 210
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 41/69 (59%), Gaps = 7/69 (10%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS---SRGDRVALISGTPEQKRA 612
L+VL+P+ A G +IGK G + ++K +GATI++S SK +RV LI GT E
Sbjct: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVE---- 107
Query: 613 AENLIQAFI 621
A N + FI
Sbjct: 108 ALNAVHGFI 116
Score = 42.4 bits (98), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS---SRGDRVALISGTPEQKRA 612
+E+ VP N VG ++GK G L ++++GA I++S +R I+GTP +A
Sbjct: 401 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAATQA 460
Query: 613 AENLI 617
A+ LI
Sbjct: 461 AQYLI 465
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS--SRGDRVALISGTPEQKRAA 613
++++VP + G +IGK G+ + + + SGA +++S + +RV +SG PEQ R A
Sbjct: 150 VKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPDGINLQERVVTVSGEPEQNRKA 209
Query: 614 ENLI 617
LI
Sbjct: 210 VELI 213
>gi|383862493|ref|XP_003706718.1| PREDICTED: poly(rC)-binding protein 4-like isoform 1 [Megachile
rotundata]
Length = 466
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 91/380 (23%), Positives = 154/380 (40%), Gaps = 65/380 (17%)
Query: 36 SVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKED 95
++ R++ +GS+IGK G+++ R+E+ A++ + D +R+VT+
Sbjct: 17 TLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDG--SCPERIVTVTGPTNS--- 71
Query: 96 VEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANII 155
+ A + K + + + +++VP+SQ ++I
Sbjct: 72 ------------IFKAFTLICKKFEEWCSQFHDIQSGGGVPRPPITLRLIVPASQCGSLI 119
Query: 156 GKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIM 215
GK G+ IK +R T SI+V + T + V ISG SEA+ + ++ I +M
Sbjct: 120 GKGGSKIKEIREVTGASIQVASEMLPNST-------ERAVTISGTSEAITQCIYHICCVM 172
Query: 216 YKFSPR-EDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVP 274
+ P+ IP + P I+ Y G Y +P+ S LG+ +
Sbjct: 173 LESPPKGATIPYRPKPQVGGPLILAGGQA--YTIQGNY-----AVPAHSDMGKLGSNPLA 225
Query: 275 DLQGYADTGNTWPVYSTGLSLVSGL-----------------VGASQSEELVIRVLCPFN 317
L G P + GL+ + +Q+ E+ + P
Sbjct: 226 GLAALGLGGLATPANTGGLNPAALAALAGSQLRTSNTNRQQPAANNQTHEMTV----PNE 281
Query: 318 KIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECV-ITVTAIESPDDIK------SMA 370
IG +IGKGG I IRQ SGA I + + ++ T+T +PD + SM+
Sbjct: 282 LIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGATDRTITITGNPDAVALAQYLISMS 341
Query: 371 VEAVLLLQTKINDEDDDTVT 390
VE LQ K N E +T T
Sbjct: 342 VE----LQ-KANLEAQNTQT 356
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 51/113 (45%), Gaps = 18/113 (15%)
Query: 381 INDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELV 440
+ND+ T+TIRL++ K +G IIGK G I+ R+ + A + IS G P + +V
Sbjct: 10 LNDDPSVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCP------ERIV 63
Query: 441 EVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSGTGISMPPL 493
V G S+ A I + + + D SG G+ PP+
Sbjct: 64 TVTGPTNSIFKAFTLICKKFEEWCSQFHD------------IQSGGGVPRPPI 104
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 44/63 (69%), Gaps = 2/63 (3%)
Query: 548 GGLP-PPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEM-SDSKSSRGDRVALISG 605
GG+P PP+TL ++VPA+ G +IGK GS + IR+++GA+I++ S+ + +R ISG
Sbjct: 97 GGVPRPPITLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASEMLPNSTERAVTISG 156
Query: 606 TPE 608
T E
Sbjct: 157 TSE 159
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 555 TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRG---DRVALISGTPEQKR 611
T E+ VP +G +IGK G+ +A IR+ISGA I +S+ + G DR I+G P+
Sbjct: 273 THEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGATDRTITITGNPDAVA 332
Query: 612 AAENLI 617
A+ LI
Sbjct: 333 LAQYLI 338
>gi|350409768|ref|XP_003488838.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Bombus
impatiens]
Length = 439
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 86/176 (48%), Gaps = 12/176 (6%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSM 369
+R+L P G +IGKGG I +R A I V D E V+T+++ + P ++ +
Sbjct: 77 LRLLIPSKVAGSIIGKGGQNITKLRSQYKASIIVPDCPG--PERVLTISS-DLPTVLQVL 133
Query: 370 AVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDK 429
E V L+ + D + +R+LV GCIIGK G I E+R++T A ++I
Sbjct: 134 N-EVVPNLEENGSRHGSDEIDVRMLVHQSQAGCIIGKGGLKIKELREKTGARIKIYSH-- 190
Query: 430 PKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNP--PVGADHIYS 483
C + D L+ + G+ + + + ++I ++ LK G NP P D Y+
Sbjct: 191 -CCPHSTDRLISICGKPNTCIECIRELIATIKTSPLK---GVNNPYDPHNFDDYYA 242
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 88/200 (44%), Gaps = 39/200 (19%)
Query: 26 NEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVT 85
+++ +G++E R+L P V GS+IGK G+ I +R + +A + V D PG +RV+T
Sbjct: 67 HKRYRQGDDE---LRLLIPSKVAGSIIGKGGQNITKLRSQYKASIIVPD-CPGP-ERVLT 121
Query: 86 IYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKE-ECQI 144
I S L V + V N +N + E + ++
Sbjct: 122 ISSD-------------------------LPTVLQVLNEVVPNLEENGSRHGSDEIDVRM 156
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAV 204
LV SQ+ IIGK G IK LR KT IK+ +H C D + I G+
Sbjct: 157 LVHQSQAGCIIGKGGLKIKELREKTGARIKIY-------SHCCPHSTDRLISICGKPNTC 209
Query: 205 KKALFAISAIMYKFSPREDI 224
+ + + A + K SP + +
Sbjct: 210 IECIRELIATI-KTSPLKGV 228
Score = 39.7 bits (91), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 6/76 (7%)
Query: 311 RVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMA 370
+V P + G +IGKGG I+ +R SGA I +D+ ++ +IT+T + P I+
Sbjct: 368 QVTIPKDLAGAIIGKGGARIRKVRSDSGAGITIDEPLSGSNDRIITITGL--PSQIQM-- 423
Query: 371 VEAVLLLQTKINDEDD 386
A LLQ +++ D
Sbjct: 424 --AQYLLQQSVHENAD 437
>gi|149051189|gb|EDM03362.1| neuro-oncological ventral antigen 1, isoform CRA_c [Rattus
norvegicus]
Length = 483
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 88/174 (50%), Gaps = 19/174 (10%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD-----NRDECVI--TVTA 359
+ ++VL P G +IGKGG TI +++ +GA I + +KD C+I T+ A
Sbjct: 49 QYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTIEA 108
Query: 360 IES-----PDDIKSM-----AVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGS 409
+ + + I+ M E V +LQ + D ++++V + G IIGK G+
Sbjct: 109 LNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQVKIIVPNSTAGLIIGKGGA 168
Query: 410 IINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDD 463
+ I +++ A V++S+ KP + + +V V GE R A+ II ++++D
Sbjct: 169 TVKAIMEQSGAWVQLSQ--KPDGINLQERVVTVSGEPEQNRKAVELIIQKIQED 220
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 85/199 (42%), Gaps = 45/199 (22%)
Query: 27 EKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV---DPFPGAKDRV 83
++ G + ++L P GS+IGK G+ I +++ET A +K+ D +PG +RV
Sbjct: 40 KRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERV 99
Query: 84 VTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRK------ 137
I + +AL VH IA + N K +
Sbjct: 100 CLIQGTI----------------------EALNAVHGFIAEKIREMPQNVAKTEPVSILQ 137
Query: 138 --------EKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAM 189
++ +I+VP+S + IIGK GAT+K + ++ ++++ K P
Sbjct: 138 PQTTVNPDRIKQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQK----PDGINLQ 193
Query: 190 EFDNFVLISGESEAVKKAL 208
E V +SGE E +KA+
Sbjct: 194 E--RVVTVSGEPEQNRKAV 210
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 41/69 (59%), Gaps = 7/69 (10%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS---SRGDRVALISGTPEQKRA 612
L+VL+P+ A G +IGK G + ++K +GATI++S SK +RV LI GT E
Sbjct: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTIE---- 107
Query: 613 AENLIQAFI 621
A N + FI
Sbjct: 108 ALNAVHGFI 116
Score = 42.0 bits (97), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS---SRGDRVALISGTPEQKRA 612
+E+ VP N VG ++GK G L ++++GA I++S +R I+GTP +A
Sbjct: 400 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAATQA 459
Query: 613 AENLI 617
A+ LI
Sbjct: 460 AQYLI 464
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS--SRGDRVALISGTPEQKRAA 613
++++VP + G +IGK G+ + I + SGA +++S + +RV +SG PEQ R A
Sbjct: 150 VKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGINLQERVVTVSGEPEQNRKA 209
Query: 614 ENLI 617
LI
Sbjct: 210 VELI 213
>gi|351697928|gb|EHB00847.1| RNA-binding protein Nova-2 [Heterocephalus glaber]
Length = 320
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 87/179 (48%), Gaps = 21/179 (11%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD-----NRDECVITVTAIE 361
E ++VL P G +IGKGG TI +++ +GA I + +KD C++ TA E
Sbjct: 25 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTA-E 83
Query: 362 SPDDIKSMAVEAVL-------------LLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSG 408
+ + + S E V +LQ + D +L+V + G IIGK G
Sbjct: 84 ALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGG 143
Query: 409 SIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKD 467
+ + + +++ A V++S+ KP+ + + +V V GE V A+ I+ +L ++ K+
Sbjct: 144 ATVKAVMEQSGAWVQLSQ--KPEGINLQERVVTVSGEPEQVHKAVSAIVQKLAAESAKE 200
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 127/295 (43%), Gaps = 81/295 (27%)
Query: 136 RKEKEE--CQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDN 193
R+E+ E ++L+PS + +IIGK G TI +L+ +T +IK++ P + +
Sbjct: 20 REEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTT-----ER 74
Query: 194 FVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYP 253
L+ G +EA L A+ + + + VRE P ++ P V I L P
Sbjct: 75 VCLVQGTAEA----LNAVHSFIAE-----------KVREIPQAMTKPEVVNI-----LQP 114
Query: 254 NADPILPSRSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVL 313
+ P R A Q+ +++
Sbjct: 115 QTT-MNPDR---------------------------------------AKQA-----KLI 129
Query: 314 CPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD--NRDECVITVTAIESPDDIKSMAV 371
P + G +IGKGG T+K++ + SGA + + + N E V+TV+ P+ + AV
Sbjct: 130 VPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSG--EPEQVHK-AV 186
Query: 372 EAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISK 426
A++ K+ E + + + V ++G I+GK G + E ++ T A ++ISK
Sbjct: 187 SAIV---QKLAAESAKEL-VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISK 237
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 93/195 (47%), Gaps = 23/195 (11%)
Query: 28 KDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV---DPFPGAKDRVV 84
++E+G ++L P GS+IGK G+ I +++ET A +K+ D +PG +RV
Sbjct: 20 REEEGE---YFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVC 76
Query: 85 TIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQI 144
+ E + F E + A+ K + N + T + R ++ ++
Sbjct: 77 LVQG---TAEALNAVHSF-IAEKVREIPQAMTK--PEVVNILQPQTTMNPDR--AKQAKL 128
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAV 204
+VP+S + IIGK GAT+K + ++ ++++ K + V +SGE E V
Sbjct: 129 IVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQ------ERVVTVSGEPEQV 182
Query: 205 KKALFAISAIMYKFS 219
K A+SAI+ K +
Sbjct: 183 HK---AVSAIVQKLA 194
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 42/69 (60%), Gaps = 7/69 (10%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS---SRGDRVALISGTPEQKRA 612
L+VL+P+ A G +IGK G + ++K +GATI++S SK +RV L+ GT E
Sbjct: 28 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAE---- 83
Query: 613 AENLIQAFI 621
A N + +FI
Sbjct: 84 ALNAVHSFI 92
Score = 42.7 bits (99), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 5/66 (7%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS----SRGDRVALISGTPEQKR 611
+E+ VP N VG ++GK G L ++++GA I++S +R RV I+G+P +
Sbjct: 202 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVT-ITGSPAATQ 260
Query: 612 AAENLI 617
AA+ LI
Sbjct: 261 AAQYLI 266
>gi|33516919|sp|Q80WA4.1|NOVA1_RAT RecName: Full=RNA-binding protein Nova-1; AltName:
Full=Neuro-oncological ventral antigen 1
gi|30230625|gb|AAP20872.1| neuro-oncological ventral antigen 1-like protein [Rattus
norvegicus]
Length = 474
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 88/174 (50%), Gaps = 19/174 (10%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD-----NRDECVI--TVTA 359
+ ++VL P G +IGKGG TI +++ +GA I + +KD C+I T+ A
Sbjct: 48 QYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTIEA 107
Query: 360 IES-----PDDIKSM-----AVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGS 409
+ + + I+ M E V +LQ + D ++++V + G IIGK G+
Sbjct: 108 LNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQVKIIVPNSTAGLIIGKGGA 167
Query: 410 IINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDD 463
+ I +++ A V++S+ KP + + +V V GE R A+ II ++++D
Sbjct: 168 TVKAIMEQSGAWVQLSQ--KPDGINLQERVVTVSGEPEQNRKAVELIIQKIQED 219
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 85/199 (42%), Gaps = 45/199 (22%)
Query: 27 EKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV---DPFPGAKDRV 83
++ G + ++L P GS+IGK G+ I +++ET A +K+ D +PG +RV
Sbjct: 39 KRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERV 98
Query: 84 VTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRK------ 137
I + +AL VH IA + N K +
Sbjct: 99 CLIQGTI----------------------EALNAVHGFIAEKIREMPQNVAKTEPVSILQ 136
Query: 138 --------EKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAM 189
++ +I+VP+S + IIGK GAT+K + ++ ++++ K P
Sbjct: 137 PQTTVNPDRIKQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQK----PDGINLQ 192
Query: 190 EFDNFVLISGESEAVKKAL 208
E V +SGE E +KA+
Sbjct: 193 E--RVVTVSGEPEQNRKAV 209
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 41/69 (59%), Gaps = 7/69 (10%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS---SRGDRVALISGTPEQKRA 612
L+VL+P+ A G +IGK G + ++K +GATI++S SK +RV LI GT E
Sbjct: 51 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTIE---- 106
Query: 613 AENLIQAFI 621
A N + FI
Sbjct: 107 ALNAVHGFI 115
Score = 42.4 bits (98), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS---SRGDRVALISGTPEQKRA 612
+E+ VP N VG ++GK G L ++++GA I++S +R I+GTP +A
Sbjct: 399 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAATQA 458
Query: 613 AENLI 617
A+ LI
Sbjct: 459 AQYLI 463
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS--SRGDRVALISGTPEQKRAA 613
++++VP + G +IGK G+ + I + SGA +++S + +RV +SG PEQ R A
Sbjct: 149 VKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGINLQERVVTVSGEPEQNRKA 208
Query: 614 ENLI 617
LI
Sbjct: 209 VELI 212
>gi|354484186|ref|XP_003504271.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 2 [Cricetulus griseus]
Length = 487
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/314 (21%), Positives = 132/314 (42%), Gaps = 66/314 (21%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSM 369
+R+L P +G +IGK G TIK+I + + +++D+ K+N VT +P+
Sbjct: 127 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHR-KENSGAAEKPVTIHATPEGTS-- 183
Query: 370 AVEAVLLLQTKINDEDDDT-----VTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRI 424
EA ++ + E +DT V +++L + ++G +IGK G + +I T + I
Sbjct: 184 --EACRMILEIMQKEAEDTKLAEEVPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITI 241
Query: 425 SKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSS 484
S + + + V G + + +A ++I+ +LR+ D
Sbjct: 242 SSLQDLSIYNP-ERTITVKGTIDACANAEMEIMKKLREAFEND----------------- 283
Query: 485 GTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSS 544
ML+ +S GY + Y
Sbjct: 284 --------------------------------MLAVNSHSGYFP-----NMYPHHHFGPF 306
Query: 545 KLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS-SRGDRVALI 603
+ P T+ + +P AVG +IGK G+++ + + +GA+I+++ ++ +R+ +I
Sbjct: 307 PHHHSYPEQETVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII 366
Query: 604 SGTPEQKRAAENLI 617
+G PE + A+ I
Sbjct: 367 TGPPEAQFKAQGRI 380
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 82/353 (23%), Positives = 142/353 (40%), Gaps = 54/353 (15%)
Query: 142 CQILVPSSQSANIIGKAGATIKRLRSKTRT-----------------SIKVTPKDASEPT 184
+ILVP+ IIGK G TIK + +T++ +I TP+ SE
Sbjct: 127 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTSE-- 184
Query: 185 HSCAMEFDNFVLISGESEAVKKA------LFAISAIMYKFSPREDIPLETTVREAPPSII 238
+C M + ++ E+E K A + A + ++ + +E L+ E I
Sbjct: 185 -ACRMILE---IMQKEAEDTKLAEEVPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKIT 240
Query: 239 IPS--DVPIYPP-------GGLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTWPVY 289
I S D+ IY P G + A+ + + L A D+ +P
Sbjct: 241 ISSLQDLSIYNPERTITVKGTIDACANAEM---EIMKKLREAFENDMLAVNSHSGYFPNM 297
Query: 290 STGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTK-- 347
S E+ + + P +G +IGK G IK + + +GA I + +
Sbjct: 298 YPHHHFGPFPHHHSYPEQETVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGP 357
Query: 348 DNRDECVITVTAIESPDDIKSMA---VEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCII 404
D + VI I P + + A + L + N +++ + + V S G +I
Sbjct: 358 DVSERMVI----ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVI 413
Query: 405 GKSGSIINEIRKRTKADVRISKGDKPKCADANDE-LVEVVGEVGSVRDALVQI 456
GK G +NE++ T A+V + + P D N E +V ++G + + A +I
Sbjct: 414 GKGGKTVNELQNLTSAEVIVPRDQTP---DENAEVIVRIIGHFFASQTAQRKI 463
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 95/210 (45%), Gaps = 23/210 (10%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKV---VDPFPGAKDRVVTIYSHVK 91
E V +IL +G++G +IGK G+ + I ET ++ + D +R +T+ +
Sbjct: 204 EEVPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGTID 263
Query: 92 DKEDVEVDDEFNDKEPLCAAQDALLKVHAA-------IANAVANATDNDKKRKEKEECQI 144
+ E++ +E A ++ +L V++ + + E+E +
Sbjct: 264 ACANAEMEIMKKLRE---AFENDMLAVNSHSGYFPNMYPHHHFGPFPHHHSYPEQETVNL 320
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAV 204
+P+ IIGK GA IK+L SIK+ P + + + + V+I+G EA
Sbjct: 321 FIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVS-------ERMVIITGPPEAQ 373
Query: 205 KKALFAISAIMYK---FSPREDIPLETTVR 231
KA I + + F+P+E++ LE +R
Sbjct: 374 FKAQGRIFGKLKEENFFNPKEEVKLEAHIR 403
>gi|326378247|gb|ADZ57223.1| neuro-oncological ventral antigen [Branchiostoma lanceolatum]
Length = 508
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 82/171 (47%), Gaps = 34/171 (19%)
Query: 23 RRINEKDEKGNEE-SVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV---DPFPG 78
+R N E G E+ ++ ++L P GS+IGK G+ I +++ET A +K+ D +PG
Sbjct: 51 KRSNFGGEGGPEDGQLLLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSNDFYPG 110
Query: 79 AKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANA--------T 130
+R+V I ++D+L VH + + A +
Sbjct: 111 TTERIVVI----------------------TGSEDSLKSVHKFLMEKIGQAPRPPAKSPS 148
Query: 131 DNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+ + ++ +I+VP+S + IIGK GATIK + +T + ++++ K S
Sbjct: 149 EQNANNNRAKQVKIVVPNSTAGLIIGKGGATIKFIMEQTGSRVQISQKATS 199
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 72/141 (51%), Gaps = 19/141 (13%)
Query: 301 GASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD---NRDECVITV 357
G + +L+++VL P G +IGKGG TI +++ +GA I + + D E ++ +
Sbjct: 59 GGPEDGQLLLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSNDFYPGTTERIVVI 118
Query: 358 TAIESPDDIKSMAVEAVLLLQ------------TKINDEDDDTVTIRLLVSSKVIGCIIG 405
T E D +KS V L+ + ++ N ++ ++++V + G IIG
Sbjct: 119 TGSE--DSLKS--VHKFLMEKIGQAPRPPAKSPSEQNANNNRAKQVKIVVPNSTAGLIIG 174
Query: 406 KSGSIINEIRKRTKADVRISK 426
K G+ I I ++T + V+IS+
Sbjct: 175 KGGATIKFIMEQTGSRVQISQ 195
Score = 42.7 bits (99), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 43/72 (59%), Gaps = 7/72 (9%)
Query: 554 LTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS---SRGDRVALISGTPEQK 610
L L+VL+P+ A G +IGK G + ++K +GATI++S S +R+ +I+G+ +
Sbjct: 66 LLLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSNDFYPGTTERIVVITGSEDSL 125
Query: 611 RAAENLIQAFIM 622
++ + F+M
Sbjct: 126 KS----VHKFLM 133
Score = 42.4 bits (98), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMS---DSKSSRGDRVALISGTPEQKRA 612
+E+ VP N VG ++GK G L ++ SGA I++S + +R I+GTP +
Sbjct: 429 VELEVPENLVGAILGKGGKTLVEFQEYSGARIQISKKGEFTPGTNNRKVTITGTPAATQT 488
Query: 613 AENLIQAFI 621
A+ L++A I
Sbjct: 489 AQYLVRARI 497
>gi|56549651|ref|NP_006480.2| RNA-binding protein Nova-1 isoform 2 [Homo sapiens]
gi|119586394|gb|EAW65990.1| neuro-oncological ventral antigen 1, isoform CRA_a [Homo sapiens]
gi|119586396|gb|EAW65992.1| neuro-oncological ventral antigen 1, isoform CRA_a [Homo sapiens]
Length = 483
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 88/174 (50%), Gaps = 19/174 (10%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD-----NRDECVI--TVTA 359
+ ++VL P G +IGKGG TI +++ +GA I + +KD C+I TV A
Sbjct: 49 QYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEA 108
Query: 360 IES-----PDDIKSM-----AVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGS 409
+ + + I+ M E V +LQ + D ++++V + G IIGK G+
Sbjct: 109 LNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQVKIIVPNSTAGLIIGKGGA 168
Query: 410 IINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDD 463
+ + +++ A V++S+ KP + + +V V GE R A+ II ++++D
Sbjct: 169 TVKAVMEQSGAWVQLSQ--KPDGINLQERVVTVSGEPEQNRKAVELIIQKIQED 220
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 85/199 (42%), Gaps = 45/199 (22%)
Query: 27 EKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV---DPFPGAKDRV 83
++ G + ++L P GS+IGK G+ I +++ET A +K+ D +PG +RV
Sbjct: 40 KRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERV 99
Query: 84 VTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRK------ 137
I V +AL VH IA + N K +
Sbjct: 100 CLIQGTV----------------------EALNAVHGFIAEKIREMPQNVAKTEPVSILQ 137
Query: 138 --------EKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAM 189
++ +I+VP+S + IIGK GAT+K + ++ ++++ K P
Sbjct: 138 PQTTVNPDRIKQVKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQK----PDGINLQ 193
Query: 190 EFDNFVLISGESEAVKKAL 208
E V +SGE E +KA+
Sbjct: 194 E--RVVTVSGEPEQNRKAV 210
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 41/69 (59%), Gaps = 7/69 (10%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS---SRGDRVALISGTPEQKRA 612
L+VL+P+ A G +IGK G + ++K +GATI++S SK +RV LI GT E
Sbjct: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVE---- 107
Query: 613 AENLIQAFI 621
A N + FI
Sbjct: 108 ALNAVHGFI 116
Score = 42.0 bits (97), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS---SRGDRVALISGTPEQKRA 612
+E+ VP N VG ++GK G L ++++GA I++S +R I+GTP +A
Sbjct: 400 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAATQA 459
Query: 613 AENLI 617
A+ LI
Sbjct: 460 AQYLI 464
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS--SRGDRVALISGTPEQKRAA 613
++++VP + G +IGK G+ + + + SGA +++S + +RV +SG PEQ R A
Sbjct: 150 VKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPDGINLQERVVTVSGEPEQNRKA 209
Query: 614 ENLI 617
LI
Sbjct: 210 VELI 213
>gi|380026051|ref|XP_003696775.1| PREDICTED: RNA-binding protein Nova-2-like isoform 2 [Apis florea]
Length = 522
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 90/169 (53%), Gaps = 18/169 (10%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD-----NRDECVITVTAIESPD 364
++VL P G +IGKGG TI +++ +GA++ + + D C+IT ++E+
Sbjct: 47 LKVLVPGVAAGAIIGKGGDTIAQLQKDTGARVKMSKSHDFYPGTTERVCLIT-GSLEAIM 105
Query: 365 DIKSMAVEAV-----LLLQTKINDEDDDTVT-----IRLLVSSKVIGCIIGKSGSIINEI 414
+ ++ + L L+T ++ E T +++LV + G IIGK+G+ I +I
Sbjct: 106 AVMDFIMDKIREKPDLTLKTTVDFESGKTTAERDKQVKILVPNSTAGMIIGKAGNYIKQI 165
Query: 415 RKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDD 463
++ + V+IS+ K K + + V+GE + R+AL+ I+ ++ DD
Sbjct: 166 KEECGSYVQISQ--KAKDVSLQERCITVIGEKENNRNALMMILAKVADD 212
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 90/185 (48%), Gaps = 20/185 (10%)
Query: 32 GNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV---DPFPGAKDRVVTIYS 88
G + + ++L P G++IGK G I ++++T ARVK+ D +PG +RV I
Sbjct: 40 GGDGTYHLKVLVPGVAAGAIIGKGGDTIAQLQKDTGARVKMSKSHDFYPGTTERVCLITG 99
Query: 89 HVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPS 148
++ + V D DK + D LK + A + DK+ K ILVP+
Sbjct: 100 SLE--AIMAVMDFIMDK--IREKPDLTLKTTVDFESGKTTA-ERDKQVK------ILVPN 148
Query: 149 SQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKAL 208
S + IIGKAG IK+++ + + +++ S+ +++ + + + GE E + AL
Sbjct: 149 STAGMIIGKAGNYIKQIKEECGSYVQI-----SQKAKDVSLQ-ERCITVIGEKENNRNAL 202
Query: 209 FAISA 213
I A
Sbjct: 203 MMILA 207
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS---SRGDRVALISGTPEQKRA 612
L+VLVP A G +IGK G +A ++K +GA ++MS S +RV LI+G+ E A
Sbjct: 47 LKVLVPGVAAGAIIGKGGDTIAQLQKDTGARVKMSKSHDFYPGTTERVCLITGSLEAIMA 106
Query: 613 AENLI 617
+ I
Sbjct: 107 VMDFI 111
>gi|451997944|gb|EMD90409.1| hypothetical protein COCHEDRAFT_1225891 [Cochliobolus
heterostrophus C5]
Length = 365
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 138/328 (42%), Gaps = 39/328 (11%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT-AIESPDD 365
+L +R + + G +IGK G + +R +G + V + V++VT ++
Sbjct: 44 QLTLRAIVSSKEAGVIIGKAGKNVADLRDETGVRAGVSKVVQGVHDRVLSVTGSLSGISK 103
Query: 366 IKSMAVEAVLLLQTKIND----EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKAD 421
+A + +L + D T IRLL+S +G IIG+ G I +I+ +
Sbjct: 104 AYGLAAKGLLEGAPAMGMGGVIRTDGTHPIRLLISHNQMGTIIGRQGLKIKQIQDASGVR 163
Query: 422 VRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHI 481
+ K P+ + + +VEV G + A+ +I L DD H
Sbjct: 164 MVAQKEMLPQ---STERIVEVQGSPAGIEKAVWEIGKCLIDD----------------HE 204
Query: 482 YSSGTGISMPPL--LPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSM 539
GT + P + P + P GP A +G G+G S + G+G+ DSP
Sbjct: 205 RGYGTVLYNPAVRVQPGVGP-GPAANGGSAPAG-GMGGGRSYNRTGHGA-DFSDSPPAFS 261
Query: 540 SSYSSKLYGGLPPPLTLE---------VLVPANAVGKVIGKAGSNLANIRKISGATIEMS 590
S PPP E + +P++ VG +IG+ GS ++ IRK S A I ++
Sbjct: 262 RRSGSDAASRPPPPTHTEDGEEMQTQNISIPSDMVGCIIGRGGSKISEIRKTSNARISIA 321
Query: 591 DS-KSSRGDRVALISGTPEQKRAAENLI 617
+ G+R+ I+G+ A L+
Sbjct: 322 KAPHDDTGERMFTITGSASANEKALYLL 349
Score = 40.0 bits (92), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Query: 382 NDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVE 441
++ ++ T + + S ++GCIIG+ GS I+EIRK + A + I+K D + +
Sbjct: 278 TEDGEEMQTQNISIPSDMVGCIIGRGGSKISEIRKTSNARISIAKAPHD---DTGERMFT 334
Query: 442 VVGEVGSVRDALVQIILRLRDDALK 466
+ G + AL + L + ++
Sbjct: 335 ITGSASANEKALYLLYENLEAEKMR 359
>gi|50311087|ref|XP_455567.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49644703|emb|CAG98275.1| KLLA0F10703p [Kluyveromyces lactis]
Length = 417
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 145/347 (41%), Gaps = 51/347 (14%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSM 369
+R+LC + +V+G G + I+ + +I+V D + E VI V + +
Sbjct: 69 LRMLCLMKQASKVVGGKGERVNRIKSETNTRINVSDNINGVMERVIFVRG-----KCEEV 123
Query: 370 AVEAVLLLQTKINDEDDDT------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVR 423
A +++ N+ DDD+ + + LL+ +GCIIG+ GS ++EI + A +
Sbjct: 124 ARAFGKIVRAINNESDDDSNERSLPLVVNLLIPHHFMGCIIGRQGSRLHEIEDLSAARLM 183
Query: 424 ISKGDKPKCADANDELVEVVGEVGSVRDALV---QIILRLRDDALKDRDGSRNPPVGADH 480
S P +ND ++ + G ++ A Q IL + LK++ P G H
Sbjct: 184 ASPQQLPM---SNDRILSLTGVADAIHIATYYIGQTILE-NESKLKNKKSVFYHP-GPMH 238
Query: 481 -----------IYSSGTGISMPPLLPSIPP------VGPLGYDQRADSGSGIGMLSSSSL 523
IYS G + + P + P P+ D++ + +S +
Sbjct: 239 SVLVNNYQMYMIYSGGAPTNPQDITPMVAPHQEHHQYHPM--DKKTMNRRTKPPVSKYPI 296
Query: 524 YGYGSLSMGDSPYGSM--SSYSSKLYGGLP-----PPLTL--EVLVPANAVGKVIGKAGS 574
SL PY M S K+ L P L L EV + VG VIGK G
Sbjct: 297 GPQQSL----QPYTDMVDSCKHVKIISQLQQSPISPHLVLPQEVFIDNKFVGNVIGKGGK 352
Query: 575 NLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFI 621
N+ I++ +G I+++D +R ++ GTP + A +I I
Sbjct: 353 NIQQIKQSTGCMIKINDPVEGLDERKLVLIGTPLATQTAIMMINNRI 399
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 79/382 (20%), Positives = 146/382 (38%), Gaps = 65/382 (17%)
Query: 3 DSGKRYRSQRDNDRDGKNQK-----RRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGK 57
++G + + DN+ + +N + + EKD + R+LC V+G G+
Sbjct: 28 EAGIKRVALEDNEAEPQNSELNGDGTHLTEKDSGQVPNYINLRMLCLMKQASKVVGGKGE 87
Query: 58 VINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLK 117
+N I+ ET R+ V D G +RV+ + ++ + +
Sbjct: 88 RVNRIKSETNTRINVSDNINGVMERVIFVRGKCEE----------------------VAR 125
Query: 118 VHAAIANAVANATDND-KKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVT 176
I A+ N +D+D +R +L+P IIG+ G+ + + + + +
Sbjct: 126 AFGKIVRAINNESDDDSNERSLPLVVNLLIPHHFMGCIIGRQGSRLHEIEDLSAARLMAS 185
Query: 177 PKDASEPTHSCAMEFDNFVLISGESEAVKKALFAI--------------SAIMYKFSPRE 222
P+ M D + ++G ++A+ A + I ++ Y P
Sbjct: 186 PQ-------QLPMSNDRILSLTGVADAIHIATYYIGQTILENESKLKNKKSVFYHPGPMH 238
Query: 223 DIPLETTVRE------AP--PSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVP 274
+ + AP P I P P +P + R+ P + P
Sbjct: 239 SVLVNNYQMYMIYSGGAPTNPQDITPMVAPHQEHHQYHPMDKKTMNRRTKPPVSKYPIGP 298
Query: 275 D--LQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVI--RVLCPFNKIGRVIGKGGGTI 330
LQ Y D ++ + ++S L + S LV+ V +G VIGKGG I
Sbjct: 299 QQSLQPYTDMVDSC----KHVKIISQLQQSPISPHLVLPQEVFIDNKFVGNVIGKGGKNI 354
Query: 331 KSIRQASGAQIDVDDTKDNRDE 352
+ I+Q++G I ++D + DE
Sbjct: 355 QQIKQSTGCMIKINDPVEGLDE 376
>gi|395752934|ref|XP_002830848.2| PREDICTED: poly(rC)-binding protein 3 [Pongo abelii]
Length = 432
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 89/173 (51%), Gaps = 26/173 (15%)
Query: 318 KIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDD--IKSMAVEAVL 375
++G +IGK G T+K +R+ SGA+I++ + N E ++T+T P D K+ A+ A
Sbjct: 54 EVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG---PTDAIFKAFAMIAYK 108
Query: 376 LLQTKINDEDDDT------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDK 429
+ IN + VT+RL+V + G +IGK GS I EIR+ T A V+++
Sbjct: 109 FEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDML 168
Query: 430 PKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIY 482
P ++ + V + G DA++Q + ++ L+ +PP GA Y
Sbjct: 169 P---NSTERAVTISG----TPDAIIQCVKQICVVMLE------SPPKGATIPY 208
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 36/179 (20%)
Query: 48 IGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEP 107
+GS+IGK G+ + +R+E+ AR+ + + +R+VTI
Sbjct: 55 VGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT----------------- 95
Query: 108 LCAAQDALLKVHAAIA-----NAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATI 162
DA+ K A IA + + + +++ K +++VP+SQ ++IGK G+ I
Sbjct: 96 -----DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKI 150
Query: 163 KRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPR 221
K +R T ++V T + V ISG +A+ + + I +M + P+
Sbjct: 151 KEIRESTGAQVQVAGDMLPNST-------ERAVTISGTPDAIIQCVKQICVVMLESPPK 202
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Query: 552 PPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMS-DSKSSRGDRVALISGTPE 608
PP+TL ++VPA+ G +IGK GS + IR+ +GA ++++ D + +R ISGTP+
Sbjct: 126 PPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPD 183
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 40/66 (60%), Gaps = 3/66 (4%)
Query: 302 ASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDV-DDTKDNRDECVITVTAI 360
A+ + +R++ P ++ G +IGKGG IK IR+++GAQ+ V D N E +T++
Sbjct: 122 ATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISG- 180
Query: 361 ESPDDI 366
+PD I
Sbjct: 181 -TPDAI 185
Score = 39.3 bits (90), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 37 VIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTI 86
V R++ P GS+IGK G I IR+ T A+V+V D P + +R VTI
Sbjct: 128 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTI 178
>gi|328778258|ref|XP_391921.3| PREDICTED: poly(rC)-binding protein 3-like [Apis mellifera]
Length = 466
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 91/380 (23%), Positives = 154/380 (40%), Gaps = 65/380 (17%)
Query: 36 SVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKED 95
++ R++ +GS+IGK G+++ R+E+ A++ + D +R+VT+
Sbjct: 17 TLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDG--SCPERIVTVTGPTNS--- 71
Query: 96 VEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANII 155
+ A + K + + + + +++VP+SQ ++I
Sbjct: 72 ------------IFKAFTLICKKFEEWCSQFHDIQGSGGVPRPPITLRLIVPASQCGSLI 119
Query: 156 GKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIM 215
GK G+ IK +R T SI+V T + V ISG SEA+ + ++ I +M
Sbjct: 120 GKGGSKIKEIREVTGASIQVASDMLPNST-------ERAVTISGTSEAITQCIYHICCVM 172
Query: 216 YKFSPR-EDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVP 274
+ P+ IP + P I+ Y G Y +P+ S LG+ +
Sbjct: 173 LESPPKGATIPYRPKPQVGGPVILAGGQA--YTIQGNY-----AVPAHSDMGKLGSNPLA 225
Query: 275 DLQGYADTGNTWPVYSTGLSLVSGL-----------------VGASQSEELVIRVLCPFN 317
L G P + GL+ + +Q+ E+ + P
Sbjct: 226 GLAALGLGGLATPANTGGLNPAALAALAGSQLRTSNTNRQQPAANNQTHEMTV----PNE 281
Query: 318 KIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECV-ITVTAIESPDDIK------SMA 370
IG +IGKGG I IRQ SGA I + + ++ T+T +PD + SM+
Sbjct: 282 LIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGATDRTITITGNPDAVSLAQYLISMS 341
Query: 371 VEAVLLLQTKINDEDDDTVT 390
VE LQ K N E +T T
Sbjct: 342 VE----LQ-KANLEAQNTQT 356
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 44/63 (69%), Gaps = 2/63 (3%)
Query: 548 GGLP-PPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEM-SDSKSSRGDRVALISG 605
GG+P PP+TL ++VPA+ G +IGK GS + IR+++GA+I++ SD + +R ISG
Sbjct: 97 GGVPRPPITLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASDMLPNSTERAVTISG 156
Query: 606 TPE 608
T E
Sbjct: 157 TSE 159
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 11/101 (10%)
Query: 381 INDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELV 440
+ND+ T+TIRL++ K +G IIGK G I+ R+ + A + IS G P + +V
Sbjct: 10 LNDDPSVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCP------ERIV 63
Query: 441 EVVGEVGSVRDALVQIILRLRDDALKDRD-----GSRNPPV 476
V G S+ A I + + + D G PP+
Sbjct: 64 TVTGPTNSIFKAFTLICKKFEEWCSQFHDIQGSGGVPRPPI 104
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 555 TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRG---DRVALISGTPEQKR 611
T E+ VP +G +IGK G+ +A IR+ISGA I +S+ + G DR I+G P+
Sbjct: 273 THEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGATDRTITITGNPDAVS 332
Query: 612 AAENLI 617
A+ LI
Sbjct: 333 LAQYLI 338
>gi|326378263|gb|ADZ57231.1| neuro-oncological ventral antigen [Branchiostoma floridae]
Length = 511
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 99/206 (48%), Gaps = 40/206 (19%)
Query: 23 RRINEKDEKGNEE-SVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV---DPFPG 78
+R N E G E+ ++ ++L P GS+IGK G+ I +++ET A +K+ D +PG
Sbjct: 51 KRSNFGGEGGPEDGQLLLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSNDFYPG 110
Query: 79 AKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANA--------T 130
+R+V I ++D+L VH + ++ A +
Sbjct: 111 TTERIVVI----------------------TGSEDSLKSVHKFLMEKISQAPQPPAKSPS 148
Query: 131 DNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAME 190
+ + ++ +I+VP+S + IIGK GATIK + +T + ++++ K T+ +
Sbjct: 149 EQNANNNRAKQVKIVVPNSTAGLIIGKGGATIKFIMEQTGSRVQISQKA----TNGINLP 204
Query: 191 FDNFVLISGESEAVKKAL-FAISAIM 215
+ + I+GE E KA F ++ I+
Sbjct: 205 -ERVITITGEPEQNDKACAFIVNKIV 229
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 72/141 (51%), Gaps = 19/141 (13%)
Query: 301 GASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD---NRDECVITV 357
G + +L+++VL P G +IGKGG TI +++ +GA I + + D E ++ +
Sbjct: 59 GGPEDGQLLLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSNDFYPGTTERIVVI 118
Query: 358 TAIESPDDIKSMAVEAVLLLQ------------TKINDEDDDTVTIRLLVSSKVIGCIIG 405
T E D +KS V L+ + ++ N ++ ++++V + G IIG
Sbjct: 119 TGSE--DSLKS--VHKFLMEKISQAPQPPAKSPSEQNANNNRAKQVKIVVPNSTAGLIIG 174
Query: 406 KSGSIINEIRKRTKADVRISK 426
K G+ I I ++T + V+IS+
Sbjct: 175 KGGATIKFIMEQTGSRVQISQ 195
Score = 42.7 bits (99), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 43/72 (59%), Gaps = 7/72 (9%)
Query: 554 LTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS---SRGDRVALISGTPEQK 610
L L+VL+P+ A G +IGK G + ++K +GATI++S S +R+ +I+G+ +
Sbjct: 66 LLLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSNDFYPGTTERIVVITGSEDSL 125
Query: 611 RAAENLIQAFIM 622
++ + F+M
Sbjct: 126 KS----VHKFLM 133
Score = 42.4 bits (98), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMS---DSKSSRGDRVALISGTPEQKRA 612
+E+ VP N VG ++GK G L ++ SGA I++S + +R I+GTP +
Sbjct: 429 VELEVPENLVGAILGKGGKTLVEFQEYSGARIQISKKGEFTPGTNNRKVTITGTPAATQT 488
Query: 613 AENLIQAFI 621
A+ L++A I
Sbjct: 489 AQYLVRARI 497
>gi|350405177|ref|XP_003487350.1| PREDICTED: poly(rC)-binding protein 3-like [Bombus impatiens]
Length = 466
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 91/380 (23%), Positives = 154/380 (40%), Gaps = 65/380 (17%)
Query: 36 SVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKED 95
++ R++ +GS+IGK G+++ R+E+ A++ + D +R+VT+
Sbjct: 17 TLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDG--SCPERIVTVTGPTNS--- 71
Query: 96 VEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANII 155
+ A + K + + + + +++VP+SQ ++I
Sbjct: 72 ------------IFKAFTLICKKFEEWCSQFHDIQGSGGVPRPPITLRLIVPASQCGSLI 119
Query: 156 GKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIM 215
GK G+ IK +R T SI+V T + V ISG SEA+ + ++ I +M
Sbjct: 120 GKGGSKIKEIREVTGASIQVASDMLPNST-------ERAVTISGTSEAITQCIYHICCVM 172
Query: 216 YKFSPR-EDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVP 274
+ P+ IP + P I+ Y G Y +P+ S LG+ +
Sbjct: 173 LESPPKGATIPYRPKPQVGGPVILAGGQA--YTIQGNY-----AVPAHSDMGKLGSNPLA 225
Query: 275 DLQGYADTGNTWPVYSTGLSLVSGL-----------------VGASQSEELVIRVLCPFN 317
L G P + GL+ + +Q+ E+ + P
Sbjct: 226 GLAALGLGGLATPANTGGLNPAALAALAGSQLRTSNTNRQQPAANNQTHEMTV----PNE 281
Query: 318 KIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECV-ITVTAIESPDDIK------SMA 370
IG +IGKGG I IRQ SGA I + + ++ T+T +PD + SM+
Sbjct: 282 LIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGATDRTITITGNPDAVALAQYLISMS 341
Query: 371 VEAVLLLQTKINDEDDDTVT 390
VE LQ K N E +T T
Sbjct: 342 VE----LQ-KANLEAQNTQT 356
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 44/63 (69%), Gaps = 2/63 (3%)
Query: 548 GGLP-PPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEM-SDSKSSRGDRVALISG 605
GG+P PP+TL ++VPA+ G +IGK GS + IR+++GA+I++ SD + +R ISG
Sbjct: 97 GGVPRPPITLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASDMLPNSTERAVTISG 156
Query: 606 TPE 608
T E
Sbjct: 157 TSE 159
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 11/101 (10%)
Query: 381 INDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELV 440
+ND+ T+TIRL++ K +G IIGK G I+ R+ + A + IS G P + +V
Sbjct: 10 LNDDPSVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCP------ERIV 63
Query: 441 EVVGEVGSVRDALVQIILRLRDDALKDRD-----GSRNPPV 476
V G S+ A I + + + D G PP+
Sbjct: 64 TVTGPTNSIFKAFTLICKKFEEWCSQFHDIQGSGGVPRPPI 104
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 555 TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRG---DRVALISGTPEQKR 611
T E+ VP +G +IGK G+ +A IR+ISGA I +S+ + G DR I+G P+
Sbjct: 273 THEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGATDRTITITGNPDAVA 332
Query: 612 AAENLI 617
A+ LI
Sbjct: 333 LAQYLI 338
>gi|313228886|emb|CBY18038.1| unnamed protein product [Oikopleura dioica]
Length = 626
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 128/322 (39%), Gaps = 45/322 (13%)
Query: 306 EELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDV--DDTKDNRDECVITVTAIESP 363
EE +I +K+G VIGKGG +K++RQ +++ DT V+ +T +
Sbjct: 144 EEFLISP----DKVGVVIGKGGQNLKNLRQKYQVSLELVQKDTDPEGVAKVLKITGNSTQ 199
Query: 364 DDIKSMAVEAVLLLQ---TKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKA 420
+ M + LL + T V V +G IIGK G I ++ T
Sbjct: 200 INGTRMDIFTTLLPKEEKTAAKLAPGGQVKSEFPVPQGAVGVIIGKKGETITHLQGETVT 259
Query: 421 DVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADH 480
++ KP+ DA + G + V A QI++ + + D +N
Sbjct: 260 RIQF----KPEEPDAATRGCYITGSMEGVLRAQ-QIVMSICRKKMTGVDTIQN------- 307
Query: 481 IYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMS 540
I G G + P + P P+ ++Q S G+G + G +
Sbjct: 308 IPKFGQGQAPPMMAPPHNGAPPMNWNQ--------------SPAGHGGYN------GMQN 347
Query: 541 SYS-SKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGD- 598
SY + L P T++ VPA G VIGK G ++ I+ SG I + + D
Sbjct: 348 SYQMPRPPPALQPEQTVDYPVPAQKAGAVIGKGGEHIIAIKNQSGCQITQNKTNPPSNDT 407
Query: 599 --RVALISGTPEQKRAAENLIQ 618
R I G PE + A+ LIQ
Sbjct: 408 AWRYFTIKGQPEGVQLAQKLIQ 429
Score = 43.1 bits (100), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 557 EVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENL 616
E +P VG VIG+ G N+ I+ + I++ + +R ++GTPEQ +AA+N
Sbjct: 52 EYPIPDQLVGLVIGRGGENIQRIQAETNCGIQVQAQSTGSENRPCTLTGTPEQLQAAKNA 111
Query: 617 IQ 618
+Q
Sbjct: 112 LQ 113
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 65/150 (43%), Gaps = 20/150 (13%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKE 94
+ V+ PD ++G VIG+ G+ I I+ ET ++V G+++R T+
Sbjct: 47 DKVVEEYPIPDQLVGLVIGRGGENIQRIQAETNCGIQVQAQSTGSENRPCTL-------- 98
Query: 95 DVEVDDEFNDKEPLCAAQDALLKVHAAIA----NAVANATDNDKKRKEKEEC-QILVPSS 149
E L AA++AL A AV + + + C + L+
Sbjct: 99 -------TGTPEQLQAAKNALQNDSRNRAPNTRRAVTQPPMPNPSQPWQTTCEEFLISPD 151
Query: 150 QSANIIGKAGATIKRLRSKTRTSIKVTPKD 179
+ +IGK G +K LR K + S+++ KD
Sbjct: 152 KVGVVIGKGGQNLKNLRQKYQVSLELVQKD 181
>gi|348524725|ref|XP_003449873.1| PREDICTED: RNA-binding protein Nova-1-like [Oreochromis niloticus]
Length = 503
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 86/174 (49%), Gaps = 19/174 (10%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD-----NRDECVI--TVTA 359
E ++VL P G +IGKGG TI +++ +GA I + +KD C+I TV A
Sbjct: 64 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEA 123
Query: 360 IESPDDIKSMAV----------EAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGS 409
+ + + V E V +LQ + D +L+V + G IIGK G+
Sbjct: 124 LNGVHNFIAEKVREMPQSAQKPEPVSILQPQTTVNPDRVKQAKLIVPNSTAGLIIGKGGA 183
Query: 410 IINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDD 463
+ + +++ A V++S+ KP+ + + +V + GE R A+ I+ ++++D
Sbjct: 184 TVKAVMEQSGAWVQLSQ--KPEGINLQERVVTISGEPEQNRKAVEIIVQKIQED 235
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 84/194 (43%), Gaps = 35/194 (18%)
Query: 27 EKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV---DPFPGAKDRV 83
++ G E ++L P GS+IGK G+ I +++ET A +K+ D +PG +RV
Sbjct: 55 KRTNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERV 114
Query: 84 VTIYSHVKDKEDV---------EVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDK 134
I V+ V E+ EP+ Q T N
Sbjct: 115 CLIQGTVEALNGVHNFIAEKVREMPQSAQKPEPVSILQP--------------QTTVNPD 160
Query: 135 KRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNF 194
+ K + +++VP+S + IIGK GAT+K + ++ ++++ K +
Sbjct: 161 RVK---QAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQ------ERV 211
Query: 195 VLISGESEAVKKAL 208
V ISGE E +KA+
Sbjct: 212 VTISGEPEQNRKAV 225
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS---SRGDRVALISGTPEQKRA 612
L+VL+P+ A G +IGK G + ++K +GATI++S SK +RV LI GT E
Sbjct: 67 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNG 126
Query: 613 AENLI 617
N I
Sbjct: 127 VHNFI 131
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS---SRGDRVALISGTPEQKRA 612
+E+ VP N VG ++GK G L ++++GA I++S +R I+G+P +A
Sbjct: 420 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGSPAATQA 479
Query: 613 AENLI 617
A+ LI
Sbjct: 480 AQYLI 484
Score = 40.0 bits (92), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 557 EVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS--SRGDRVALISGTPEQKRAAE 614
+++VP + G +IGK G+ + + + SGA +++S + +RV ISG PEQ R A
Sbjct: 166 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTISGEPEQNRKAV 225
Query: 615 NLI 617
+I
Sbjct: 226 EII 228
>gi|328781397|ref|XP_392536.4| PREDICTED: heterogeneous nuclear ribonucleoprotein K [Apis
mellifera]
Length = 482
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 86/176 (48%), Gaps = 12/176 (6%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSM 369
+R+L P G +IGKGG I +R A I V D E V+T+++ + P ++ +
Sbjct: 84 LRLLIPSKVAGSIIGKGGQNITKLRSQYKASIIVPDCPG--PERVLTISS-DLPTVLQVL 140
Query: 370 AVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDK 429
E V L+ + D + +R+LV GCIIGK G I E+R++T A ++I
Sbjct: 141 N-EVVPNLEENGSRHGSDEIDVRMLVHQSQAGCIIGKGGLKIKELREKTGARIKIYSH-- 197
Query: 430 PKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNP--PVGADHIYS 483
C + D L+ + G+ + + + ++I ++ LK G NP P D Y+
Sbjct: 198 -CCPHSTDRLISICGKPTTCIECIRELIATIKTSPLK---GVNNPYDPHNFDDYYA 249
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 88/200 (44%), Gaps = 39/200 (19%)
Query: 26 NEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVT 85
+++ +G++E R+L P V GS+IGK G+ I +R + +A + V D PG +RV+T
Sbjct: 74 HKRYRQGDDE---LRLLIPSKVAGSIIGKGGQNITKLRSQYKASIIVPD-CPGP-ERVLT 128
Query: 86 IYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKE-ECQI 144
I S L V + V N +N + E + ++
Sbjct: 129 ISSD-------------------------LPTVLQVLNEVVPNLEENGSRHGSDEIDVRM 163
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAV 204
LV SQ+ IIGK G IK LR KT IK+ +H C D + I G+
Sbjct: 164 LVHQSQAGCIIGKGGLKIKELREKTGARIKIY-------SHCCPHSTDRLISICGKPTTC 216
Query: 205 KKALFAISAIMYKFSPREDI 224
+ + + A + K SP + +
Sbjct: 217 IECIRELIATI-KTSPLKGV 235
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%)
Query: 555 TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAE 614
T +V +P + G +IGK G+ + +R SGA I + + S DR+ I+G P Q + A+
Sbjct: 409 TTQVTIPKDLAGAIIGKGGARIRKVRSDSGAGITIDEPLSGSNDRIITITGLPSQIQMAQ 468
Query: 615 NLIQ 618
L+Q
Sbjct: 469 YLLQ 472
Score = 40.0 bits (92), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 6/76 (7%)
Query: 311 RVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMA 370
+V P + G +IGKGG I+ +R SGA I +D+ ++ +IT+T + P I+
Sbjct: 411 QVTIPKDLAGAIIGKGGARIRKVRSDSGAGITIDEPLSGSNDRIITITGL--PSQIQM-- 466
Query: 371 VEAVLLLQTKINDEDD 386
A LLQ +++ D
Sbjct: 467 --AQYLLQQSVHENAD 480
>gi|218184511|gb|EEC66938.1| hypothetical protein OsI_33565 [Oryza sativa Indica Group]
Length = 800
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 82/192 (42%), Gaps = 39/192 (20%)
Query: 309 VIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKS 368
V R+L P K+G VIG G ++ + + + A + V E + + A E PD+ K
Sbjct: 241 VFRMLIPATKVGAVIGHSGERLRRLCEETKACVRVIGGHFAAAERAVIIFAKEQPDEPKP 300
Query: 369 MAVEAVL-LLQTKINDEDDDT-----VTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADV 422
A++A+L + + IND+ D V R+L S+ +IG GS+IN I+K +K ++
Sbjct: 301 PAIDALLRVYECTINDDGLDVRYNNIVVARILTPSEQAASLIGDQGSVINYIKKASKTNI 360
Query: 423 RI---------------------------------SKGDKPKCADANDELVEVVGEVGSV 449
+ + GD P A +D ++E+ G V
Sbjct: 361 HVIGNFLTLMHLLEPLVPSIDKFDISGLQLSIYTDADGDLPPVALEDDMIIEIWGLPARV 420
Query: 450 RDALVQIILRLR 461
AL + LR
Sbjct: 421 HQALELVACHLR 432
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 77/149 (51%), Gaps = 16/149 (10%)
Query: 27 EKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTI 86
E + G + ++R+L P +G+VIG SG+ + + +ET+A V+V+ A +R V I
Sbjct: 230 ENRDPGWPGTSVFRMLIPATKVGAVIGHSGERLRRLCEETKACVRVIGGHFAAAERAVII 289
Query: 87 YSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILV 146
++ K++ D EP A DALL+V+ N D + +IL
Sbjct: 290 FA--KEQPD----------EPKPPAIDALLRVY----ECTINDDGLDVRYNNIVVARILT 333
Query: 147 PSSQSANIIGKAGATIKRLRSKTRTSIKV 175
PS Q+A++IG G+ I ++ ++T+I V
Sbjct: 334 PSEQAASLIGDQGSVINYIKKASKTNIHV 362
>gi|380479025|emb|CCF43264.1| KH domain-containing protein [Colletotrichum higginsianum]
Length = 384
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 148/337 (43%), Gaps = 43/337 (12%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTA-IESPDD 365
+L +R + + G +IGK G + +R +G + V + V+T+T +S +
Sbjct: 47 QLTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTITGGCQSVSE 106
Query: 366 IKSMAVEAVLLLQTKIND----EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKAD 421
S+ A+L + +++ T I+LL+S +G IIG+ G I I+ +
Sbjct: 107 AYSIVARALLEGAPSLGMGGVVQNNGTHPIKLLISHNQMGTIIGRQGLKIKHIQDASGVR 166
Query: 422 VRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDD------------ALKDRD 469
+ K P+ + + +VEV G ++ A+ +I L DD A++ +
Sbjct: 167 MVAQKEMLPQ---STERIVEVQGTPEGIKGAVWEICKCLVDDWQRGTGTVLYNPAVRTQP 223
Query: 470 GSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSL 529
G+ + G+ +SSG G S P + G G D S++S G
Sbjct: 224 GTTSTTGGSTATFSSGGGRSNDYSAPRVMRTGN-GAD-----------FSTNSNSNNGGG 271
Query: 530 SMGDSPYGSMSSYSSKLYGGLPPPL--------TLEVLVPANAVGKVIGKAGSNLANIRK 581
G PYG S + G PP T + +PA+ VG +IG+AGS ++ IRK
Sbjct: 272 GGGGRPYGRRSDSDAASRG--PPTHDENGEELQTQNISIPADMVGCIIGRAGSKISEIRK 329
Query: 582 ISGATIEMSDS-KSSRGDRVALISGTPEQKRAAENLI 617
SGA I ++ + G+R+ I GT + +A L+
Sbjct: 330 TSGARISIAKAPHDDTGERMFTIMGTAKANESALFLL 366
>gi|395506297|ref|XP_003757471.1| PREDICTED: far upstream element-binding protein 3 [Sarcophilus
harrisii]
Length = 623
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 144/348 (41%), Gaps = 56/348 (16%)
Query: 315 PFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDE--CVITVT--AIESPDDIKSMA 370
P +G +IG+GG I I+ SG +I + E CV+T T +IE +
Sbjct: 136 PDKMVGFIIGRGGEQISRIQAESGCKIQIAPESSGIPERPCVLTGTPESIEQAKRLLGQI 195
Query: 371 VEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKAD-VRISKGDK 429
V+ ND D + +L+ + +G +IGK G I ++++RT + I G
Sbjct: 196 VDRCRNGPGFHNDVDGNNTIQEILIPASKVGLVIGKGGETIKQLQERTGVKMIMIQDGPL 255
Query: 430 PKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSGTG-- 487
P A D+ + + G+ V+ A ++ + ++++D + V +D G G
Sbjct: 256 PTGA---DKPLRITGDPFKVQQAREMVL-----EIIREKDQADFRGVRSDFSSRMGGGSI 307
Query: 488 -ISMPPLLPSI-------------------------PPVGP------LGYDQRADSGSGI 515
+S+P I + P +G +R + +
Sbjct: 308 EVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPERVAQVMGLPERCQHAAHV 367
Query: 516 ---GMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKA 572
+L++ G+GSLS+ S +S GGL + VPA+ G VIGK
Sbjct: 368 ISDLILTAQERDGFGSLSVPRGRGRGRSDWSVGAPGGL---QEVTYTVPADKCGLVIGKG 424
Query: 573 GSNLANIRKISGATIEMSDSKSSRGD---RVALISGTPEQKRAAENLI 617
G N+ +I + SGA +E+ + D R+ I G P+Q A +LI
Sbjct: 425 GENIKSINQQSGAHVELQRNPPPNTDPSVRIFTIRGIPQQIELARHLI 472
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 537 GSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSR 596
G S +SS++ GG ++EV VP AVG VIG+ G + I+ +G I+
Sbjct: 293 GVRSDFSSRMGGG-----SIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGIS 347
Query: 597 GDRVALISGTPEQKRAAENLIQAFIM 622
+RVA + G PE+ + A ++I I+
Sbjct: 348 PERVAQVMGLPERCQHAAHVISDLIL 373
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 81/345 (23%), Positives = 125/345 (36%), Gaps = 88/345 (25%)
Query: 27 EKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVD--PFPGAKDRVV 84
D GN + I IL P +G VIGK G+ I +++ T ++ ++ P P D+ +
Sbjct: 206 HNDVDGN--NTIQEILIPASKVGLVIGKGGETIKQLQERTGVKMIMIQDGPLPTGADKPL 263
Query: 85 TIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDND-KKRKEKEECQ 143
I D F ++ A++ +L++ A +D R +
Sbjct: 264 RI-----------TGDPFKVQQ----AREMVLEIIREKDQADFRGVRSDFSSRMGGGSIE 308
Query: 144 ILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEA 203
+ VP +IG+ G IK++++ I+ P D P + + G E
Sbjct: 309 VSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISP--------ERVAQVMGLPER 360
Query: 204 VKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRS 263
+ A IS D+ L R+ S S
Sbjct: 361 CQHAAHVIS----------DLILTAQERDG-------------------------FGSLS 385
Query: 264 VPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVI 323
VP G R + W V + G GL +E+ V P +K G VI
Sbjct: 386 VPRGRGRGR-----------SDWSVGAPG-----GL------QEVTYTV--PADKCGLVI 421
Query: 324 GKGGGTIKSIRQASGAQIDVD-DTKDNRDECVITVTAIESPDDIK 367
GKGG IKSI Q SGA +++ + N D V T P I+
Sbjct: 422 GKGGENIKSINQQSGAHVELQRNPPPNTDPSVRIFTIRGIPQQIE 466
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%)
Query: 554 LTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAA 613
+T E VP VG +IG+ G ++ I+ SG I+++ S +R +++GTPE A
Sbjct: 129 ITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIAPESSGIPERPCVLTGTPESIEQA 188
Query: 614 ENLI 617
+ L+
Sbjct: 189 KRLL 192
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 75/164 (45%), Gaps = 24/164 (14%)
Query: 44 PDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFN 103
PD ++G +IG+ G+ I+ I+ E+ ++++ G +R + E +E
Sbjct: 136 PDKMVGFIIGRGGEQISRIQAESGCKIQIAPESSGIPERPCVL---TGTPESIE------ 186
Query: 104 DKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIK 163
A+ L ++ N D D +E IL+P+S+ +IGK G TIK
Sbjct: 187 ------QAKRLLGQIVDRCRNGPGFHNDVDGNNTIQE---ILIPASKVGLVIGKGGETIK 237
Query: 164 RLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKA 207
+L+ +T + + +D PT + D + I+G+ V++A
Sbjct: 238 QLQERTGVKM-IMIQDGPLPTGA-----DKPLRITGDPFKVQQA 275
>gi|426343191|ref|XP_004038198.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
[Gorilla gorilla gorilla]
Length = 376
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 127/302 (42%), Gaps = 60/302 (19%)
Query: 319 IGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQ 378
+G +IGK G TIK+I + + +++D+ K+N VT +P+ S A +L +
Sbjct: 25 VGAIIGKEGLTIKNITKQTQSRVDIHR-KENSGAAEKPVTIHATPEGT-SEACRMILEIM 82
Query: 379 TKINDEDD--DTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADAN 436
K DE + + +++L + ++G +IGK G + +I T + IS +
Sbjct: 83 QKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNP- 141
Query: 437 DELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSGTGISMPPLLPS 496
+ + V G V + A ++I+ +LR+ D
Sbjct: 142 ERTITVKGTVEACASAEIEIMKKLREAFEND----------------------------- 172
Query: 497 IPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTL 556
ML+ ++ GY S +G + S P +
Sbjct: 173 --------------------MLAVNTHSGYFSSLYPHHQFGPFPHHHS-----YPEQEIV 207
Query: 557 EVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS-SRGDRVALISGTPEQKRAAEN 615
+ +P AVG +IGK G+++ + + +GA+I+++ ++ +R+ +I+G PE + A+
Sbjct: 208 NLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKAQG 267
Query: 616 LI 617
I
Sbjct: 268 RI 269
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 101/223 (45%), Gaps = 33/223 (14%)
Query: 27 EKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARV--------KVVDPFPG 78
E DE E + +IL +G++G +IGK G+ + I ET ++ + +P
Sbjct: 85 EADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNP--- 141
Query: 79 AKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKV--HAAIANAVANATD----- 131
+R +T+ V+ E++ +E A ++ +L V H+ +++
Sbjct: 142 --ERTITVKGTVEACASAEIEIMKKLRE---AFENDMLAVNTHSGYFSSLYPHHQFGPFP 196
Query: 132 NDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEF 191
+ E+E + +P+ IIGK GA IK+L SIK+ P + + +
Sbjct: 197 HHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVS------- 249
Query: 192 DNFVLISGESEAVKKALFAISAIMYK---FSPREDIPLETTVR 231
+ V+I+G EA KA I + + F+P+E++ LE +R
Sbjct: 250 ERMVIITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIR 292
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 76/160 (47%), Gaps = 13/160 (8%)
Query: 303 SQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTK--DNRDECVITVTAI 360
S E+ ++ + P +G +IGK G IK + + +GA I + + D + VI I
Sbjct: 200 SYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVI----I 255
Query: 361 ESPDDIKSMA---VEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKR 417
P + + A + L + N +++ + + V S G +IGK G +NE++
Sbjct: 256 TGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNL 315
Query: 418 TKADVRISKGDKPKCADANDE-LVEVVGEVGSVRDALVQI 456
T A+V + + P D N+E +V ++G + + A +I
Sbjct: 316 TSAEVIVPRDQTP---DENEEVIVRIIGHFFASQTAQRKI 352
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 58/148 (39%), Gaps = 24/148 (16%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPF-PGAKDRVVTIYSHVKDK 93
E I + P +G++IGK G I + + A +K+ P +R+V I
Sbjct: 203 EQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII------- 255
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
+A K I + + K + K E I VPSS +
Sbjct: 256 ---------------TGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGR 300
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+IGK G T+ L++ T + + P+D +
Sbjct: 301 VIGKGGKTVNELQNLTSAEV-IVPRDQT 327
>gi|448538474|ref|XP_003871504.1| Pbp2 RNA binding protein [Candida orthopsilosis Co 90-125]
gi|380355861|emb|CCG25380.1| Pbp2 RNA binding protein [Candida orthopsilosis]
Length = 579
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 75/344 (21%), Positives = 133/344 (38%), Gaps = 79/344 (22%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSM 369
R+ CP + V+GK G I +R+ + +I + D E +ITV +++
Sbjct: 193 FRMYCPVKEASTVVGKQGAKINHLREKADVKIQISDNLRGVPERIITVRGT-----AENV 247
Query: 370 AVEAVLLLQTKINDEDD-------DTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADV 422
A L+++T + + +D ++LLV + +IG IIGK G EI + + A +
Sbjct: 248 ARAFGLIVRTILGEPEDVPANLSSQQYNLKLLVPNAIIGYIIGKQGLKFREIEENSAAKL 307
Query: 423 RISKGDKPKCADANDELVEVVGEVGSVRDA---LVQIILRLRDDALKDRDGSRNPPVGAD 479
+ ++ P D ++ V+G ++ A + ++++ +D K R NP A+
Sbjct: 308 KAAEQPLPHST---DRVLSVLGVADAIHIAVYFIAEVVIEHKDVLKKGRVILYNP---AN 361
Query: 480 HIYSSGTGISMPPL---------------LPSIPPVG---------PLGYDQRADSGSGI 515
H + PSIP +G P+GY Q+
Sbjct: 362 HQHEENQHGGNQQQQQQQQHHQQQHHQSRFPSIPQIGAPPSNQYGSPIGY-QKPFPSDSP 420
Query: 516 GMLSSSSLYGYGSLSMGDSP----YG---SMSSYSSKLYGGLPPP--------------- 553
S Y + + P YG M+ + G+PP
Sbjct: 421 HQPQSHQPYNFSMMFQPSVPPQQQYGIPQQMAPPPPPVSQGVPPQSQYTDEYNNTMIGEV 480
Query: 554 -----------LTLEVLVPANAVGKVIGKAGSNLANIRKISGAT 586
+V V +++G VIGK G+N+ +IR+ SG +
Sbjct: 481 IIKEPVLAGDKYNQDVFVANSSIGSVIGKGGNNIKHIRENSGCS 524
Score = 42.4 bits (98), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 35/60 (58%)
Query: 27 EKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTI 86
+KD + + V +R+ CP +V+GK G IN +R++ ++++ D G +R++T+
Sbjct: 181 QKDYESDPSYVSFRMYCPVKEASTVVGKQGAKINHLREKADVKIQISDNLRGVPERIITV 240
>gi|395333911|gb|EJF66288.1| hypothetical protein DICSQDRAFT_159257 [Dichomitus squalens
LYAD-421 SS1]
Length = 405
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 146/340 (42%), Gaps = 70/340 (20%)
Query: 301 GASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAI 360
G++ + + +R L +IGKGG + IR+ SGA++ V ++ E ++ V+
Sbjct: 94 GSTPAANIHMRCLIVTQDASIIIGKGGSHVNEIREKSGARVMVSESIPGNPERILNVSG- 152
Query: 361 ESPDDIKSMAVEAVLLLQTKINDEDDD--------TVTIRLLVSSKVIGCIIGKSGSIIN 412
P D S +A L+ +INDE D VTI+ ++ + +G +IGK G+ I
Sbjct: 153 --PLDAVS---KAFGLIVRRINDEPFDKPSVPGSRAVTIKFMIPNSRMGSVIGKGGTKIK 207
Query: 413 EIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSR 472
EI+ + A + S+G P + + L+ V G V DA + I + L + +
Sbjct: 208 EIQDASGARLNASEGMLP---GSTERLLSVSG----VADA-IHIATYYIGNILIEAN--- 256
Query: 473 NPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMG 532
+ + SS P PP + SS + GY +
Sbjct: 257 ------ERMPSSNHSTYRPTSQSRRPP-----------------YMGSSYVPGYAPAA-- 291
Query: 533 DSPYGSMSSYSSKLYGGLPPP--LTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMS 590
+ ++ + Y G PP T ++ +P + VG +IGK G+ + IR +S + I++
Sbjct: 292 -----AAAATAHNPYAGGPPSQLQTQQIYIPNDLVGCIIGKGGAKINEIRHMSASQIKIM 346
Query: 591 DSKS-------------SRGDRVALISGTPEQKRAAENLI 617
+ + S G+R+ +I+G P + A L+
Sbjct: 347 EPGAVGVGMNGAPAPAGSEGERLVVITGQPANIQMAVQLL 386
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 117/299 (39%), Gaps = 74/299 (24%)
Query: 51 VIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDV------EVDDEFND 104
+IGK G +N IR+++ ARV V + PG +R++ + + ++DE D
Sbjct: 115 IIGKGGSHVNEIREKSGARVMVSESIPGNPERILNVSGPLDAVSKAFGLIVRRINDEPFD 174
Query: 105 KEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKR 164
K + ++ +K ++P+S+ ++IGK G IK
Sbjct: 175 KPSVPGSRAVTIK--------------------------FMIPNSRMGSVIGKGGTKIKE 208
Query: 165 LRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDI 224
++ + + +ASE + E + +SG ++A+ A + I I+ + + R
Sbjct: 209 IQDASGARL-----NASEGMLPGSTE--RLLSVSGVADAIHIATYYIGNILIEANERMPS 261
Query: 225 PLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQGYADTGN 284
+T R P SR P +G++ VP GYA
Sbjct: 262 SNHSTYR-------------------------PTSQSRR-PPYMGSSYVP---GYAPAAA 292
Query: 285 TWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDV 343
+ + G S+ ++ P + +G +IGKGG I IR S +QI +
Sbjct: 293 AA------ATAHNPYAGGPPSQLQTQQIYIPNDLVGCIIGKGGAKINEIRHMSASQIKI 345
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/217 (20%), Positives = 88/217 (40%), Gaps = 54/217 (24%)
Query: 305 SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTK-DNRDECVITVTAIESP 363
S + I+ + P +++G VIGKGG IK I+ ASGA+++ + E +++V+ +
Sbjct: 181 SRAVTIKFMIPNSRMGSVIGKGGTKIKEIQDASGARLNASEGMLPGSTERLLSVSGVADA 240
Query: 364 DDIKSMAVEAVLL-LQTKINDEDDDTV--------------------------------- 389
I + + +L+ ++ + T
Sbjct: 241 IHIATYYIGNILIEANERMPSSNHSTYRPTSQSRRPPYMGSSYVPGYAPAAAAAATAHNP 300
Query: 390 ----------TIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISK---------GDKP 430
T ++ + + ++GCIIGK G+ INEIR + + ++I + G
Sbjct: 301 YAGGPPSQLQTQQIYIPNDLVGCIIGKGGAKINEIRHMSASQIKIMEPGAVGVGMNGAPA 360
Query: 431 KCADANDELVEVVGEVGSVRDALVQIILRLRDDALKD 467
+ LV + G+ +++ A+ + RL + K
Sbjct: 361 PAGSEGERLVVITGQPANIQMAVQLLYSRLEQEKQKQ 397
>gi|449473856|ref|XP_004186185.1| PREDICTED: LOW QUALITY PROTEIN: poly(rC) binding protein 4
[Taeniopygia guttata]
Length = 245
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 66/118 (55%), Gaps = 10/118 (8%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDV-DDTKDNRDECVITVTAIESPDDI 366
+ +R++ P ++ G +IGK G I+ IR+++GAQ+ V D N E +TV+ + PD I
Sbjct: 106 VTLRLVIPASQCGSLIGKAGAKIREIRESTGAQVQVAGDLLPNSTERAVTVSGV--PDTI 163
Query: 367 KSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRI 424
+ L D + + LV + +IGCIIG+ GS I+EIR+ + A ++I
Sbjct: 164 IQCVRQICL-------DPSSQSSSQEFLVPNDLIGCIIGRHGSKISEIRQMSGAHIKI 214
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 87/178 (48%), Gaps = 23/178 (12%)
Query: 297 SGLVGASQSEELVI----RVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDE 352
SG+ G+ + EL I R+L +IG +IGK G T+K IR+ S A+I + +
Sbjct: 8 SGVGGSPEETELSITLTLRMLMHGKEIGSIIGKKGETVKRIREQSTARITISE-----GS 62
Query: 353 CVITVTAIESPDDIKSMAVEAVLL-LQTKINDEDDDT------VTIRLLVSSKVIGCIIG 405
C +T I D AV + L+ + D VT+RL++ + G +IG
Sbjct: 63 CPERITTITGSTDAVFRAVSMIAFKLEEDLGAGGDGVSAGRAPVTLRLVIPASQCGSLIG 122
Query: 406 KSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDD 463
K+G+ I EIR+ T A V+++ P ++ + V V G V D ++Q + ++ D
Sbjct: 123 KAGAKIREIRESTGAQVQVAGDLLP---NSTERAVTVSG----VPDTIIQCVRQICLD 173
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 557 EVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENL 616
E LVP + +G +IG+ GS ++ IR++SGA I++ + +R I+GTP A+ L
Sbjct: 182 EFLVPNDLIGCIIGRHGSKISEIRQMSGAHIKIGNQTEGSSERHVTITGTPVSITLAQYL 241
Query: 617 IQAF 620
I A+
Sbjct: 242 ITAW 245
Score = 46.2 bits (108), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 6/83 (7%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+T+R+L+ K IG IIGK G + IR+++ A + IS+G P + + + G
Sbjct: 22 TLTLRMLMHGKEIGSIIGKKGETVKRIREQSTARITISEGSCP------ERITTITGSTD 75
Query: 448 SVRDALVQIILRLRDDALKDRDG 470
+V A+ I +L +D DG
Sbjct: 76 AVFRAVSMIAFKLEEDLGAGGDG 98
Score = 46.2 bits (108), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 63/140 (45%), Gaps = 20/140 (14%)
Query: 36 SVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKED 95
++ R+L IGS+IGK G+ + IR+++ AR+ + + +R+ TI
Sbjct: 22 TLTLRMLMHGKEIGSIIGKKGETVKRIREQSTARITISEG--SCPERITTITGSTDAVFR 79
Query: 96 VEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANII 155
F +E L A D + A + ++++P+SQ ++I
Sbjct: 80 AVSMIAFKLEEDLGAGGDGVSAGRAPVT------------------LRLVIPASQCGSLI 121
Query: 156 GKAGATIKRLRSKTRTSIKV 175
GKAGA I+ +R T ++V
Sbjct: 122 GKAGAKIREIRESTGAQVQV 141
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 553 PLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMS-DSKSSRGDRVALISGTPE 608
P+TL +++PA+ G +IGKAG+ + IR+ +GA ++++ D + +R +SG P+
Sbjct: 105 PVTLRLVIPASQCGSLIGKAGAKIREIRESTGAQVQVAGDLLPNSTERAVTVSGVPD 161
Score = 38.9 bits (89), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 70/179 (39%), Gaps = 42/179 (23%)
Query: 37 VIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKED 95
V R++ P GS+IGK+G I IR+ T A+V+V D P + +R VT+
Sbjct: 106 VTLRLVIPASQCGSLIGKAGAKIREIRESTGAQVQVAGDLLPNSTERAVTVSG------- 158
Query: 96 VEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANII 155
D C Q L D + +E LVP+ II
Sbjct: 159 ------VPDTIIQCVRQICL---------------DPSSQSSSQE---FLVPNDLIGCII 194
Query: 156 GKAGATIKRLRSKTRTSIKV-TPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISA 213
G+ G+ I +R + IK+ + S H V I+G ++ A + I+A
Sbjct: 195 GRHGSKISEIRQMSGAHIKIGNQTEGSSERH---------VTITGTPVSITLAQYLITA 244
>gi|390458450|ref|XP_002806580.2| PREDICTED: LOW QUALITY PROTEIN: far upstream element-binding
protein 3 [Callithrix jacchus]
Length = 773
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 134/340 (39%), Gaps = 40/340 (11%)
Query: 315 PFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDE--CVITVT--AIESPDDIKSMA 370
P +G +IG+GG I I+ SG +I + E CV+T T +IE +
Sbjct: 201 PDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPESIEQAKRLLGQI 260
Query: 371 VEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKAD-VRISKGDK 429
V+ ND D ++ +L+ + +G +IG+ G I ++++RT V I G
Sbjct: 261 VDRCRNGPGFHNDIDSNSTIQEILIPASKVGLVIGRGGETIKQLQERTGVKMVMIQDGPL 320
Query: 430 PKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSS----- 484
P AD + +V R+ +++II + G + +G I S
Sbjct: 321 PTGADKPLRITGDPFKVQQAREMVLEIIREKDQADFRGVRGDFSSRMGGGSIEVSVPRFA 380
Query: 485 -------------------GTGISMPP---LLP--SIPPVGPLGYDQRADSGSGIGMLSS 520
G I P + P + +GP Q A +L++
Sbjct: 381 VGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPERAAQVMGPPDRCQHAAHIINELILTA 440
Query: 521 SSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIR 580
G+G L++ +S GG+ + VPA+ G VIGK G N+ +I
Sbjct: 441 QERDGFGGLAVARGRGRGRGDWSVGAPGGV---QEITYTVPADKCGLVIGKGGENIKSIN 497
Query: 581 KISGATIEMSDSKSSRGD---RVALISGTPEQKRAAENLI 617
+ SGA +E+ + D R I G P+Q A LI
Sbjct: 498 QQSGAHVELQRNPPPNSDPNLRRFTIRGVPQQIEVARQLI 537
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%)
Query: 554 LTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAA 613
+T E VP VG +IG+ G ++ I+ SG I+++ S +R +++GTPE A
Sbjct: 194 ITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPESIEQA 253
Query: 614 ENLI 617
+ L+
Sbjct: 254 KRLL 257
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 537 GSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSR 596
G +SS++ GG ++EV VP AVG VIG+ G + I+ +G I+
Sbjct: 358 GVRGDFSSRMGGG-----SIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGIS 412
Query: 597 GDRVALISGTPEQKRAAENLIQAFIM 622
+R A + G P++ + A ++I I+
Sbjct: 413 PERAAQVMGPPDRCQHAAHIINELIL 438
Score = 40.0 bits (92), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 75/164 (45%), Gaps = 24/164 (14%)
Query: 44 PDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFN 103
PD ++G +IG+ G+ I+ I+ E+ ++++ G +R + E +E
Sbjct: 201 PDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVL---TGTPESIE------ 251
Query: 104 DKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIK 163
A+ L ++ N D D +E IL+P+S+ +IG+ G TIK
Sbjct: 252 ------QAKRLLGQIVDRCRNGPGFHNDIDSNSTIQE---ILIPASKVGLVIGRGGETIK 302
Query: 164 RLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKA 207
+L+ +T + V +D PT + D + I+G+ V++A
Sbjct: 303 QLQERTGVKM-VMIQDGPLPTGA-----DKPLRITGDPFKVQQA 340
>gi|339258170|ref|XP_003369271.1| putative KH domain protein [Trichinella spiralis]
gi|316966532|gb|EFV51093.1| putative KH domain protein [Trichinella spiralis]
Length = 640
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 135/329 (41%), Gaps = 52/329 (15%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSM 369
+R+L G VIGKGG IK +R A +++ D+ +P+ + ++
Sbjct: 284 LRLLIASKSAGAVIGKGGENIKRLRSQYCASVNIPDSS--------------TPERVLNI 329
Query: 370 AVEAVLLLQTKINDE----DD-----DTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKA 420
+ V L ++D DD +R+LV G IIG++G I E+R T A
Sbjct: 330 SCANVATLTDCVSDLIPRLDDGKSGPQEAEVRMLVHQSQAGAIIGRAGFKIKELRDITGA 389
Query: 421 DVRISKGDKPKCADANDE-LVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGAD 479
+R+ +CA + E +++ G+ ++ +V I +++ P G +
Sbjct: 390 GIRVYS----ECAPLSTERVIQFSGD----KEKIVNAIRHVKEIC------EETPIKGVE 435
Query: 480 HIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSS------SLYGYGSLS-MG 532
+Y + M L + + + G+ SSS G +S M
Sbjct: 436 RLYDANN-YDMSYALDYGGYTTDRNWRSNSTTRRSSGIHSSSPAASTPHFTGVNEISPMQ 494
Query: 533 DSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDS 592
Y MS Y+ L T++V +P G +IGK G + IR+ SGA I +
Sbjct: 495 ALGYSPMSLYAENLIA------TVQVTIPKELGGTIIGKGGERINRIREESGAQIVVDPP 548
Query: 593 KSSRGDRVALISGTPEQKRAAENLIQAFI 621
+R+ ISGT Q + + L+Q I
Sbjct: 549 TPDSDERIITISGTTSQIKLGQYLLQQCI 577
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 89/355 (25%), Positives = 143/355 (40%), Gaps = 59/355 (16%)
Query: 16 RDGKNQKRRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDP 75
R +++ + K + E R+L G+VIGK G+ I +R + A V + D
Sbjct: 261 RYYQDESLHYSRKRRRSGHEGPELRLLIASKSAGAVIGKGGENIKRLRSQYCASVNIPDS 320
Query: 76 FPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANAT---DN 132
+RV+ I CA A + + V++ D+
Sbjct: 321 --STPERVLNI---------------------SCANV-------ATLTDCVSDLIPRLDD 350
Query: 133 DKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFD 192
K ++ E ++LV SQ+ IIG+AG IK LR T I+V + A T +
Sbjct: 351 GKSGPQEAEVRMLVHQSQAGAIIGRAGFKIKELRDITGAGIRVYSECAPLST-------E 403
Query: 193 NFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAPPS---IIIPSDVPIYPPG 249
+ SG+ E + A+ + I E+ P++ R + + D Y
Sbjct: 404 RVIQFSGDKEKIVNAIRHVKEIC------EETPIKGVERLYDANNYDMSYALDYGGYTTD 457
Query: 250 GLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELV 309
+ + S + S AA P G + P+ + G S +S +E L+
Sbjct: 458 RNWRSNSTTRRSSGIHSSSPAASTPHFTGVNEIS---PMQALGYSPMS-----LYAENLI 509
Query: 310 --IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIES 362
++V P G +IGKGG I IR+ SGAQI VD + DE +IT++ S
Sbjct: 510 ATVQVTIPKELGGTIIGKGGERINRIREESGAQIVVDPPTPDSDERIITISGTTS 564
>gi|449266765|gb|EMC77781.1| Far upstream element-binding protein 3, partial [Columba livia]
Length = 508
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 144/350 (41%), Gaps = 60/350 (17%)
Query: 315 PFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDE--CVITVT--AIESPDDIKSMA 370
P +G +IG+GG I I+ SG +I + E CV+T +IE +
Sbjct: 74 PDKMVGFIIGRGGEQISRIQAESGCKIQIAPDSGGMPERPCVLTGMPESIEQAKRLLGQI 133
Query: 371 VEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKAD-VRISKGDK 429
V+ ND D ++ +L+ + +G +IGK G I ++++RT + I G
Sbjct: 134 VDRCRNGPGFHNDVDGNSTIQEILIPASKVGLVIGKGGETIKQLQERTGVKMIMIQDGPL 193
Query: 430 PKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSGTG-- 487
P AD + + + G+ V+ A ++ +R+ KD+ R G + +SS G
Sbjct: 194 PTGAD---KPLRITGDAFKVQQAREMVLEIIRE---KDQADFR----GVRNDFSSRMGGG 243
Query: 488 ---ISMPPLLPSI-----------------------PPVG--------PLGYDQRADSGS 513
+S+P I P G +G R +
Sbjct: 244 SIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISSERVAQVMGLPDRCQHAA 303
Query: 514 GI---GMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIG 570
I +L++ G+GSL++ +S GG+ + VPA+ G VIG
Sbjct: 304 HIISELILTAQERDGFGSLAVARGRGRGRGDWSVGTPGGMQ---EITYTVPADKCGLVIG 360
Query: 571 KAGSNLANIRKISGATIEMSDS---KSSRGDRVALISGTPEQKRAAENLI 617
K G N+ +I + SGA +E+ + + G R+ I G P+Q A +LI
Sbjct: 361 KGGENIKSINQQSGAHVELQRNPPPNTDPGVRIFTIRGVPQQIELARHLI 410
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 537 GSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSR 596
G + +SS++ GG ++EV VP AVG VIG+ G + I+ +G I+
Sbjct: 231 GVRNDFSSRMGGG-----SIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGIS 285
Query: 597 GDRVALISGTPEQKRAAENLIQAFIM 622
+RVA + G P++ + A ++I I+
Sbjct: 286 SERVAQVMGLPDRCQHAAHIISELIL 311
>gi|218191842|gb|EEC74269.1| hypothetical protein OsI_09495 [Oryza sativa Indica Group]
Length = 263
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 115/262 (43%), Gaps = 45/262 (17%)
Query: 375 LLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCAD 434
LL + + ++E + +RL+V + G IIGK GS I + + A ++IS D
Sbjct: 32 LLAEGEESNEAEARPKVRLVVPNSSCGGIIGKGGSTIKSFIEDSHAGIKISPQDN-NFVG 90
Query: 435 ANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSGTGISMPPLL 494
+D LV V G + A+ I+ +L +D + S P A + S G+ + ++
Sbjct: 91 LHDRLVTVTGPLDHQMRAIYLILSKLSEDVHYPPNLSSPFPY-AGLGFPSYPGVPVGYMI 149
Query: 495 PSIP-----PVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGG 549
P +P GP GY R + M S ++ SL++G
Sbjct: 150 PQVPYNNAVNYGPNGYGGRYQNKPSTPMRSPANNDAQDSLTIG----------------- 192
Query: 550 LPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVA-------L 602
+ +G V+G+AG N+ I + SGA I++SD RGD +A
Sbjct: 193 ----------IADEHIGAVVGRAGRNITEIIQASGARIKISD----RGDFIAGTSERKVT 238
Query: 603 ISGTPEQKRAAENLIQAFIMAT 624
I+GT E +AAE++I + A+
Sbjct: 239 ITGTSEAIQAAESMIMQRVTAS 260
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 97/236 (41%), Gaps = 27/236 (11%)
Query: 113 DALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTS 172
D ++K I + + + + + + +++VP+S IIGK G+TIK +
Sbjct: 19 DEVIKAMELILEKLLAEGEESNEAEARPKVRLVVPNSSCGGIIGKGGSTIKSFIEDSHAG 78
Query: 173 IKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVRE 232
IK++P+D ++ D V ++G + +A++ I+ K S ED+
Sbjct: 79 IKISPQD-----NNFVGLHDRLVTVTGPLDHQMRAIY---LILSKLS--EDV-------H 121
Query: 233 APPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQGYADTGNTWPVYSTG 292
PP++ P +P GL P P V ++ + Y G +
Sbjct: 122 YPPNLSSP-----FPYAGL---GFPSYPGVPVGYMIPQVPYNNAVNYGPNGYGGRYQNKP 173
Query: 293 LSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD 348
+ + + L I + IG V+G+ G I I QASGA+I + D D
Sbjct: 174 STPMRSPANNDAQDSLTIGIAD--EHIGAVVGRAGRNITEIIQASGARIKISDRGD 227
>gi|71023653|ref|XP_762056.1| hypothetical protein UM05909.1 [Ustilago maydis 521]
gi|46101621|gb|EAK86854.1| hypothetical protein UM05909.1 [Ustilago maydis 521]
Length = 850
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 144/330 (43%), Gaps = 53/330 (16%)
Query: 303 SQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIES 362
+Q+ ++ +R L + +IGK G I IR S A++++ + E ++TV+
Sbjct: 542 TQATQISMRTLIVTSDASIIIGKSGKHINEIRDKSNARLNISEIIPGNPERILTVSG--- 598
Query: 363 PDDIKSMAVEAVLLLQTKINDEDDD--------TVTIRLLVSSKVIGCIIGKSGSIINEI 414
P D S +A L+ +INDE D +VTIR +V + +G +IGK GS I EI
Sbjct: 599 PLDAVS---KAFGLIVRRINDEPFDLASVPGSKSVTIRFIVPNSRMGSVIGKQGSKIKEI 655
Query: 415 RKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNP 474
++ + A + + P E V + V DA+ + + L+ D + N
Sbjct: 656 QEASGARLTAGEAMLPGS-------TERVLSISGVADAVHIAVYYVGSILLEHPDRNANN 708
Query: 475 PVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDS 534
LP P G G RA + + +GYG+ + G
Sbjct: 709 -------------------LPYRPTAG--GPSTRAGAAGANPYAAPQQPFGYGAPAAGFG 747
Query: 535 PYGSMSSYSSKLYGGLPP-PLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSD-- 591
+ + + +L PP T ++ +P + VG +IGK GS + IR +S + I++ +
Sbjct: 748 GAPAGAGGAPQL----PPGSQTQQIFIPNDLVGCIIGKGGSKINEIRSMSASHIKIMEPG 803
Query: 592 ----SKSSRGDRVALISGTPEQKRAAENLI 617
+ S +R+ I+G P + A +L+
Sbjct: 804 AGIAAGGSGNERLVTITGPPPNIQMAVSLL 833
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 143/349 (40%), Gaps = 84/349 (24%)
Query: 51 VIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCA 110
+IGKSGK IN IR ++ AR+ + + PG +R++T+ PL
Sbjct: 561 IIGKSGKHINEIRDKSNARLNISEIIPGNPERILTV------------------SGPL-- 600
Query: 111 AQDALLKVHAAIANAVANATDNDKKR-------KEKEECQILVPSSQSANIIGKAGATIK 163
DA+ K I + ND+ + + +VP+S+ ++IGK G+ IK
Sbjct: 601 --DAVSKAFGLIVRRI-----NDEPFDLASVPGSKSVTIRFIVPNSRMGSVIGKQGSKIK 653
Query: 164 RLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPR-- 221
++ + ++T +A P + + + ISG ++AV A++ + +I+ + R
Sbjct: 654 EIQEA--SGARLTAGEAMLPGST-----ERVLSISGVADAVHIAVYYVGSILLEHPDRNA 706
Query: 222 EDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQGYAD 281
++P T PS + G P A P P GY
Sbjct: 707 NNLPYRPTA--GGPSTRAGA-------AGANPYAAPQQPF----------------GYGA 741
Query: 282 TGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQI 341
+ G L SQ++++ I P + +G +IGKGG I IR S + I
Sbjct: 742 PAAGFGGAPAGAGGAPQLPPGSQTQQIFI----PNDLVGCIIGKGGSKINEIRSMSASHI 797
Query: 342 DVDD------TKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKINDE 384
+ + + +E ++T+T P +I+ AV LL ++ E
Sbjct: 798 KIMEPGAGIAAGGSGNERLVTITG--PPPNIQM----AVSLLYQRLEQE 840
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 390 TIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISK--GDKPKCADANDELVEVVGEVG 447
T ++ + + ++GCIIGK GS INEIR + + ++I + N+ LV + G
Sbjct: 765 TQQIFIPNDLVGCIIGKGGSKINEIRSMSASHIKIMEPGAGIAAGGSGNERLVTITGPPP 824
Query: 448 SVRDALVQIILRLRDDALKDRDG 470
+++ A+ + RL + ++ G
Sbjct: 825 NIQMAVSLLYQRLEQEKMRLAQG 847
Score = 38.9 bits (89), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 77/189 (40%), Gaps = 37/189 (19%)
Query: 23 RRINEK----DEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDP-FP 77
RRIN++ +SV R + P+ +GSVIGK G I I++ + AR+ + P
Sbjct: 612 RRINDEPFDLASVPGSKSVTIRFIVPNSRMGSVIGKQGSKIKEIQEASGARLTAGEAMLP 671
Query: 78 GAKDRVVTIYSHVKDKEDVEV-----------DDEFNDKEPLCAAQDALLKVHAAIANAV 126
G+ +RV++I S V D + V D N+ A + AA AN
Sbjct: 672 GSTERVLSI-SGVADAVHIAVYYVGSILLEHPDRNANNLPYRPTAGGPSTRAGAAGANPY 730
Query: 127 A--------------------NATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLR 166
A A + + QI +P+ IIGK G+ I +R
Sbjct: 731 AAPQQPFGYGAPAAGFGGAPAGAGGAPQLPPGSQTQQIFIPNDLVGCIIGKGGSKINEIR 790
Query: 167 SKTRTSIKV 175
S + + IK+
Sbjct: 791 SMSASHIKI 799
>gi|403260495|ref|XP_003922705.1| PREDICTED: poly(rC)-binding protein 1 [Saimiri boliviensis
boliviensis]
Length = 302
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 86/163 (52%), Gaps = 16/163 (9%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
L IR+L ++G +IGK G ++K IR+ SGA+I++ + N E +IT+T P +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIITLTG---PTNAI 68
Query: 368 SMAVEAVL-LLQTKINDEDDDT-------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
A ++ L+ IN ++ VT+RL+V + G +IGK G I EIR+ T
Sbjct: 69 FKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTG 128
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRD 462
A V+++ P ++ + + + G SV + + QI L + +
Sbjct: 129 AQVQVAGDMLP---NSTERAITIAGVPQSVTECVKQICLVMLE 168
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 9/92 (9%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+TIRLL+ K +G IIGK G + IR+ + A + IS+G+ P + ++ + G
Sbjct: 13 TLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCP------ERIITLTGPTN 66
Query: 448 SVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
++ A II +L +D ++ + + PPV
Sbjct: 67 AIFKAFAMIIDKLEEDINSSMTNSTAASRPPV 98
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 69/151 (45%), Gaps = 29/151 (19%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH 89
E G ++ R+L +GS+IGK G+ + IR+E+ AR+ + + +R++T
Sbjct: 7 ESGLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIIT---- 60
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAV-----ANATDNDKKRKEKEECQI 144
L +A+ K A I + + ++ T++ + ++
Sbjct: 61 ------------------LTGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRL 102
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKV 175
+VP++Q ++IGK G IK +R T ++V
Sbjct: 103 VVPATQCGSLIGKGGCKIKEIRESTGAQVQV 133
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 552 PPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMS-DSKSSRGDRVALISGTPE 608
PP+TL ++VPA G +IGK G + IR+ +GA ++++ D + +R I+G P+
Sbjct: 96 PPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGVPQ 153
>gi|116192195|ref|XP_001221910.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88181728|gb|EAQ89196.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 375
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 138/326 (42%), Gaps = 34/326 (10%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTA-IESPDD 365
+L +R + + G +IGKGG + +R +G + V + V+T+T E+
Sbjct: 49 QLTLRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVYDRVLTITGGCEAISR 108
Query: 366 IKSMAVEAVLLLQTKIND----EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKAD 421
++ A+L I + + T I+LL+S +G IIG+ G I I+ +
Sbjct: 109 AYAVVARALLEGAPTIGMGGVVQSNGTHPIKLLISHNQMGTIIGRQGLKIKHIQDVSGVR 168
Query: 422 VRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHI 481
+ K P+ + + +VEV G ++ A+ +I L DD + PV +
Sbjct: 169 MVAQKEMLPQ---STERIVEVQGTPEGIQRAIWEICKCLVDDWQRGAGTVLYNPV----V 221
Query: 482 YSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSS 541
+ G G + P + D+ GS + + + + G G PY S
Sbjct: 222 RTQGAGAA-----PGVTGTTNFVQDRAPYGGSRVTRTGNGADFSNG----GPRPYNRRSD 272
Query: 542 YSSKLYGGLPPPL---------TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDS 592
+ G PP T + +PA+ VG +IG+ GS ++ IRK SGA I ++ +
Sbjct: 273 SDAAARG---PPTHDENGEEIQTQNISIPADMVGCIIGRGGSKISEIRKTSGARISIAKA 329
Query: 593 -KSSRGDRVALISGTPEQKRAAENLI 617
G+R+ I G+ + A L+
Sbjct: 330 PHDETGERMFTIMGSAKANERALFLL 355
>gi|432101641|gb|ELK29690.1| RNA-binding protein Nova-2 [Myotis davidii]
Length = 294
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 87/179 (48%), Gaps = 21/179 (11%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD-----NRDECVITVTAIE 361
E ++VL P G +IGKGG TI +++ +GA I + +KD C++ TA E
Sbjct: 40 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTA-E 98
Query: 362 SPDDIKSMAVEAVL-------------LLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSG 408
+ + + S E V +LQ + D +L+V + G IIGK G
Sbjct: 99 ALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGG 158
Query: 409 SIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKD 467
+ + + +++ A V++S+ KP+ + + +V V GE V A+ I+ +L ++ K+
Sbjct: 159 ATVKAVMEQSGAWVQLSQ--KPEGINLQERVVTVSGEPEQVHKAVSAIVQKLAAESAKE 215
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 122/286 (42%), Gaps = 79/286 (27%)
Query: 143 QILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESE 202
++L+PS + +IIGK G TI +L+ +T +IK++ P + + L+ G +E
Sbjct: 44 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTT-----ERVCLVQGTAE 98
Query: 203 AVKKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSR 262
A L A+ + + + VRE P ++ P V I L P + P R
Sbjct: 99 A----LNAVHSFIAE-----------KVREIPQAMTKPEVVNI-----LQPQTT-MNPDR 137
Query: 263 SVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRV 322
A Q+ +++ P + G +
Sbjct: 138 ---------------------------------------AKQA-----KLIVPNSTAGLI 153
Query: 323 IGKGGGTIKSIRQASGAQIDVDDTKD--NRDECVITVTAIESPDDIKSMAVEAVLLLQTK 380
IGKGG T+K++ + SGA + + + N E V+TV+ P+ + AV A++ K
Sbjct: 154 IGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSG--EPEQVHK-AVSAIV---QK 207
Query: 381 INDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISK 426
+ E + + + V ++G I+GK G + E ++ T A ++ISK
Sbjct: 208 LAAESAKEL-VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISK 252
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 91/196 (46%), Gaps = 17/196 (8%)
Query: 34 EESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV---DPFPGAKDRVVTIYSHV 90
E ++L P GS+IGK G+ I +++ET A +K+ D +PG +RV +
Sbjct: 38 EGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQG-- 95
Query: 91 KDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQ 150
E + F E + A+ K + N + T + R ++ +++VP+S
Sbjct: 96 -TAEALNAVHSF-IAEKVREIPQAMTKPE--VVNILQPQTTMNPDR--AKQAKLIVPNST 149
Query: 151 SANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFA 210
+ IIGK GAT+K + ++ ++++ K + V +SGE E V KA+ A
Sbjct: 150 AGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQ------ERVVTVSGEPEQVHKAVSA 203
Query: 211 ISAIMYKFSPREDIPL 226
I + S +E + +
Sbjct: 204 IVQKLAAESAKELVEI 219
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 42/69 (60%), Gaps = 7/69 (10%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS---SRGDRVALISGTPEQKRA 612
L+VL+P+ A G +IGK G + ++K +GATI++S SK +RV L+ GT E
Sbjct: 43 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAE---- 98
Query: 613 AENLIQAFI 621
A N + +FI
Sbjct: 99 ALNAVHSFI 107
>gi|197127216|gb|ACH43714.1| putative neuro-oncological ventral antigen 1-like protein
[Taeniopygia guttata]
Length = 220
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 88/176 (50%), Gaps = 23/176 (13%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD-----NRDECVI--TVTA 359
+ ++VL P G +IGKGG TI +++ +GA I + +KD C+I TV A
Sbjct: 49 QYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEA 108
Query: 360 I------------ESPDDIKSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKS 407
+ E P ++ ++L QT +N D ++++V + G IIGK
Sbjct: 109 LNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVN--PDRIKQVKIIVPNSTAGLIIGKG 166
Query: 408 GSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDD 463
G+ + I +++ A V++S+ KP + + +V V GE R A+ II ++++D
Sbjct: 167 GATVKAIMEQSGAWVQLSQ--KPDGINLQERVVTVSGEPEQNRKAVELIIQKIQED 220
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 84/197 (42%), Gaps = 45/197 (22%)
Query: 32 GNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV---DPFPGAKDRVVTIYS 88
G + ++L P GS+IGK G+ I +++ET A +K+ D +PG +RV I
Sbjct: 45 GEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQG 104
Query: 89 HVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRK----------- 137
V +AL VH IA + N K +
Sbjct: 105 TV----------------------EALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTV 142
Query: 138 ---EKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNF 194
++ +I+VP+S + IIGK GAT+K + ++ ++++ K P E
Sbjct: 143 NPDRIKQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQK----PDGINLQE--RV 196
Query: 195 VLISGESEAVKKALFAI 211
V +SGE E +KA+ I
Sbjct: 197 VTVSGEPEQNRKAVELI 213
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 41/69 (59%), Gaps = 7/69 (10%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS---SRGDRVALISGTPEQKRA 612
L+VL+P+ A G +IGK G + ++K +GATI++S SK +RV LI GT E
Sbjct: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVE---- 107
Query: 613 AENLIQAFI 621
A N + FI
Sbjct: 108 ALNAVHGFI 116
Score = 42.7 bits (99), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS--SRGDRVALISGTPEQKRAA 613
++++VP + G +IGK G+ + I + SGA +++S + +RV +SG PEQ R A
Sbjct: 150 VKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGINLQERVVTVSGEPEQNRKA 209
Query: 614 ENLI 617
LI
Sbjct: 210 VELI 213
>gi|344266065|ref|XP_003405101.1| PREDICTED: poly(rC)-binding protein 2-like isoform 2 [Loxodonta
africana]
Length = 293
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 145/329 (44%), Gaps = 60/329 (18%)
Query: 297 SGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVIT 356
+G++ + L IR+L ++G +IGK G ++K +R+ SGA+I++ + N E +IT
Sbjct: 3 TGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIIT 60
Query: 357 VTAIESPDDIKSMAVEAVL-LLQTKINDEDDDT-------VTIRLLVSSKVIGCIIGKSG 408
+ P + A ++ L+ I+ ++ VT+RL+V + G +IGK G
Sbjct: 61 LAG---PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGG 117
Query: 409 SIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDR 468
I EIR+ T A V+++ P ++ + + + G S+ + + QI + + +
Sbjct: 118 CKIKEIRESTGAQVQVAGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLEA----- 169
Query: 469 DGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGS 528
Y+ ++P P + + L Q S M +G
Sbjct: 170 -------------YTIQGQYAIPQ--PDLTKLHQLAMQQ-----SHFPM-----THGNTG 204
Query: 529 LSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIE 588
S G +S+ E+ +P + +G +IG+ G+ + IR++SGA I+
Sbjct: 205 FSAGLDASAQTTSH--------------ELTIPNDLIGCIIGRQGAKINEIRQMSGAQIK 250
Query: 589 MSDSKSSRGDRVALISGTPEQKRAAENLI 617
+++ DR I+G+ A+ LI
Sbjct: 251 IANPVEGSTDRQVTITGSAASISLAQYLI 279
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 85/193 (44%), Gaps = 41/193 (21%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDV-DDTKDNRDECVITVT-------- 358
+ +R++ P ++ G +IGKGG IK IR+++GAQ+ V D N E IT+
Sbjct: 98 VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIE 157
Query: 359 -------------------AIESPD--DIKSMAVEAVLLLQTKIN-------DEDDDTVT 390
AI PD + +A++ T N D T +
Sbjct: 158 CVKQICVVMLEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSAGLDASAQTTS 217
Query: 391 IRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVR 450
L + + +IGCIIG+ G+ INEIR+ + A ++I+ + D V + G S+
Sbjct: 218 HELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN----PVEGSTDRQVTITGSAASIS 273
Query: 451 DALVQIILRLRDD 463
A I +RL +
Sbjct: 274 LAQYLINVRLSSE 286
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 72/336 (21%), Positives = 131/336 (38%), Gaps = 83/336 (24%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH 89
E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R++T
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIIT---- 60
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAV-----ANATDNDKKRKEKEECQI 144
L +A+ K A I + + ++ T++ + ++
Sbjct: 61 ------------------LAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRL 102
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAV 204
+VP+SQ ++IGK G IK +R T ++V T + + I+G +++
Sbjct: 103 VVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNST-------ERAITIAGIPQSI 155
Query: 205 KKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSV 264
+ + I +M + Y G Y P L
Sbjct: 156 IECVKQICVVMLEA---------------------------YTIQGQYAIPQPDL----- 183
Query: 265 PSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQ--SEELVIRVLCPFNKIGRV 322
L A + +P+ +GL ++Q S EL I P + IG +
Sbjct: 184 ---------TKLHQLAMQQSHFPMTHGNTGFSAGLDASAQTTSHELTI----PNDLIGCI 230
Query: 323 IGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
IG+ G I IRQ SGAQI + + + + +T+T
Sbjct: 231 IGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTIT 266
>gi|145341361|ref|XP_001415781.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576004|gb|ABO94073.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 340
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 129/321 (40%), Gaps = 72/321 (22%)
Query: 33 NEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV---DPFPGAKDRVVTIYSH 89
++ S + L GSVIGK G IN + T AR+++ + FPG DRVV +
Sbjct: 41 DDGSFTLKFLISPSAAGSVIGKGGATINEFQALTGARIQLSRNREVFPGTNDRVVIVSGD 100
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKV-HAAIANAVANATDNDKKRKEKEECQILVPS 148
+ A+L+V H I VA+ D R + + ++VP+
Sbjct: 101 LS----------------------AILQVLHLIITKLVADGEGID--RMGQPQVALVVPN 136
Query: 149 SQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKAL 208
S IIGK G+ I+ ++ IK++ +D P + D + I+G + V +A+
Sbjct: 137 SSCGCIIGKGGSKIRSFVEDSQADIKLSNQDRMLPGCN-----DRTLTITGTIDCVLRAV 191
Query: 209 FAISAIMYKFSPREDIPLETTV-REAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSI 267
++ + ED T V R++ S+ P + G + R+ P
Sbjct: 192 ALVATTLC-----EDPAYATLVHRQSTYSVQSPLSLQGGGGGRRSGEFN-----RATPRR 241
Query: 268 LGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGG 327
GA + G + +E I V P + IG V+G+GG
Sbjct: 242 YGAGQ----------------------------GGGRDDETSILVTIPDSLIGAVLGRGG 273
Query: 328 GTIKSIRQASGAQIDVDDTKD 348
TI ++ ASG +I V D D
Sbjct: 274 RTIAEVQVASGCRIKVSDRDD 294
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 133/324 (41%), Gaps = 62/324 (19%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD----NRDECVITVTAIESP 363
++ L + G VIGKGG TI + +GA+I + ++ D VI S
Sbjct: 45 FTLKFLISPSAAGSVIGKGGATINEFQALTGARIQLSRNREVFPGTNDRVVIV-----SG 99
Query: 364 DDIKSMAVEAVLLLQTKINDEDDDTV---TIRLLVSSKVIGCIIGKSGSIINEIRKRTKA 420
D + V +++ + + E D + + L+V + GCIIGK GS I + ++A
Sbjct: 100 DLSAILQVLHLIITKLVADGEGIDRMGQPQVALVVPNSSCGCIIGKGGSKIRSFVEDSQA 159
Query: 421 DVRISKGDK--PKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGA 478
D+++S D+ P C ND + + G + V A+ + L +D P A
Sbjct: 160 DIKLSNQDRMLPGC---NDRTLTITGTIDCVLRAVALVATTLCED-----------PAYA 205
Query: 479 DHIYSSGTGISMPPL-LPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYG 537
++ T PL L G RA + YG G
Sbjct: 206 TLVHRQSTYSVQSPLSLQGGGGGRRSGEFNRA----------TPRRYGAGQ--------- 246
Query: 538 SMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDS----K 593
GG ++ V +P + +G V+G+ G +A ++ SG I++SD +
Sbjct: 247 ---------GGGRDDETSILVTIPDSLIGAVLGRGGRTIAEVQVASGCRIKVSDRDDFFE 297
Query: 594 SSRGDRVALISGTPEQKRAAENLI 617
+R +R +ISG+ E + A L+
Sbjct: 298 GTR-NRKVVISGSAEGVQMANYLL 320
Score = 45.8 bits (107), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 385 DDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVG 444
DD + T++ L+S G +IGK G+ INE + T A +++S+ ++ ND +V V G
Sbjct: 41 DDGSFTLKFLISPSAAGSVIGKGGATINEFQALTGARIQLSR-NREVFPGTNDRVVIVSG 99
Query: 445 EVGSVRDALVQIILRLRDD 463
++ ++ L II +L D
Sbjct: 100 DLSAILQVLHLIITKLVAD 118
>gi|444021|emb|CAA82631.1| sub2.3 [Homo sapiens]
Length = 299
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 86/163 (52%), Gaps = 16/163 (9%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
L IR+L ++G +IGK G ++K IR+ SGA+I++ + N E +IT+T P +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIITLTG---PTNAI 68
Query: 368 SMAVEAVL-LLQTKINDEDDDT-------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
A ++ L+ IN ++ VT+RL+V + G +IGK G I EIR+ T
Sbjct: 69 FKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTG 128
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRD 462
A V+++ P ++ + + + G SV + + QI L + +
Sbjct: 129 AQVQVAGDMLP---NSTERAITIAGVPQSVTECVKQICLVMLE 168
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 9/92 (9%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+TIRLL+ K +G IIGK G + IR+ + A + IS+G+ P + ++ + G
Sbjct: 13 TLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCP------ERIITLTGPTN 66
Query: 448 SVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
++ A II +L +D ++ + + PPV
Sbjct: 67 AIFKAFAMIIDKLEEDINSSMTNSTAASRPPV 98
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 69/151 (45%), Gaps = 29/151 (19%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH 89
E G ++ R+L +GS+IGK G+ + IR+E+ AR+ + + +R++T
Sbjct: 7 ESGLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIIT---- 60
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAV-----ANATDNDKKRKEKEECQI 144
L +A+ K A I + + ++ T++ + ++
Sbjct: 61 ------------------LTGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRL 102
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKV 175
+VP++Q ++IGK G IK +R T ++V
Sbjct: 103 VVPATQCGSLIGKGGCKIKEIRESTGAQVQV 133
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 552 PPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMS-DSKSSRGDRVALISGTPE 608
PP+TL ++VPA G +IGK G + IR+ +GA ++++ D + +R I+G P+
Sbjct: 96 PPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGVPQ 153
>gi|147844462|emb|CAN82085.1| hypothetical protein VITISV_031054 [Vitis vinifera]
Length = 473
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 84/361 (23%), Positives = 150/361 (41%), Gaps = 31/361 (8%)
Query: 26 NEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRV-- 83
+EK G ++R++ P +GS+IG+ G++I + +ETRAR++V+D G DR+
Sbjct: 67 SEKKWPGWPGDCVFRLIVPVLKVGSIIGRKGELIKKMCEETRARIRVLDGAVGTSDRIGX 126
Query: 84 -----VTIYSHVKDK--EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDN--DK 134
+++ V D E V + + PL A DA+++V + + D D+
Sbjct: 127 MEKKMLSVLLKVVDNLLEKVLISGREEPEAPLSPAMDAVIRVFKRVTGLSESEGDGLFDQ 186
Query: 135 KRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNF 194
+ C + +S + G+ + L + + + + P ++ A E
Sbjct: 187 VNTGEHWC---ICASTVRSWFAHFGSKFQNLXAFSXEVYLLXQNEV--PFYAAADE--RI 239
Query: 195 VLISGESEAVKKALFAISAIMYKFSPREDI-PLETTVREAPPSIIIPSDVP-----IYPP 248
V + GE+ V+KAL A+ + KF + PL A S SD ++
Sbjct: 240 VELQGEALKVQKALEAVVGHLRKFLVDHSVLPLFERTYNATISQDRQSDTWADKSLLHGT 299
Query: 249 GGLYPNADPILPSRSVPSILGAARVPDLQG---YADTGNTWPVYSTGLSLVSGLVGASQS 305
+D LP++ L + G Y + S+GL G GA
Sbjct: 300 SQTGMGSDYSLPAKRESLYLDRETQMEHSGLPMYGQEHGLSGIRSSGL----GRAGAPIV 355
Query: 306 EELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDD 365
++ + P + +IG GG I IR+ SGA + V +++ DE + + S +
Sbjct: 356 TQIAQTMQIPLSYAEDIIGIGGANIAYIRRTSGAILTVQESRGLPDEITVEIKGTSSQEF 415
Query: 366 I 366
I
Sbjct: 416 I 416
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 75/342 (21%), Positives = 134/342 (39%), Gaps = 46/342 (13%)
Query: 309 VIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDD----------------------T 346
V R++ P K+G +IG+ G IK + + + A+I V D
Sbjct: 79 VFRLIVPVLKVGSIIGRKGELIKKMCEETRARIRVLDGAVGTSDRIGXMEKKMLSVLLKV 138
Query: 347 KDNRDECVITVTAIESPDDIKSMAVEAVLLLQTKIN----DEDD---DTVTI--RLLVSS 397
DN E V+ ++ E P+ S A++AV+ + ++ E D D V + +
Sbjct: 139 VDNLLEKVL-ISGREEPEAPLSPAMDAVIRVFKRVTGLSESEGDGLFDQVNTGEHWCICA 197
Query: 398 KVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQII 457
+ GS + + + + + P A A++ +VE+ GE V+ AL ++
Sbjct: 198 STVRSWFAHFGSKFQNLXAFSXEVYLLXQNEVPFYAAADERIVELQGEALKVQKALEAVV 257
Query: 458 LRLR-----DDALKDRDGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSG 512
LR L + + N + D + S LL G +G D +
Sbjct: 258 GHLRKFLVDHSVLPLFERTYNATISQDRQSDTWADKS---LLHGTSQTG-MGSDYSLPAK 313
Query: 513 SGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVL----VPANAVGKV 568
L + + L M +G +S S G P+ ++ +P + +
Sbjct: 314 RESLYLDRETQMEHSGLPMYGQEHG-LSGIRSSGLGRAGAPIVTQIAQTMQIPLSYAEDI 372
Query: 569 IGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQK 610
IG G+N+A IR+ SGA + + +S+ + I GT Q+
Sbjct: 373 IGIGGANIAYIRRTSGAILTVQESRGLPDEITVEIKGTSSQE 414
>gi|410914634|ref|XP_003970792.1| PREDICTED: RNA-binding protein Nova-1-like [Takifugu rubripes]
Length = 501
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 86/174 (49%), Gaps = 19/174 (10%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD-----NRDECVI--TVTA 359
E ++VL P G +IGKGG TI +++ +GA I + +KD C+I TV A
Sbjct: 62 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEA 121
Query: 360 IESPDDIKSMAV----------EAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGS 409
+ + + V E V +LQ + D +++V + G IIGK G+
Sbjct: 122 LNGVHNFIAEKVREMPQSAQKPEPVSILQPQTTVNPDRVKQAKIIVPNSTAGLIIGKGGA 181
Query: 410 IINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDD 463
+ + +++ A V++S+ KP+ + + +V + GE R A+ I+ ++++D
Sbjct: 182 TVKAVMEQSGAWVQLSQ--KPEGINLQERVVTISGEPEQNRKAVEIIVQKIQED 233
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 84/194 (43%), Gaps = 35/194 (18%)
Query: 27 EKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV---DPFPGAKDRV 83
++ G E ++L P GS+IGK G+ I +++ET A +K+ D +PG +RV
Sbjct: 53 KRTNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERV 112
Query: 84 VTIYSHVKDKEDV---------EVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDK 134
I V+ V E+ EP+ Q T N
Sbjct: 113 CLIQGTVEALNGVHNFIAEKVREMPQSAQKPEPVSILQP--------------QTTVNPD 158
Query: 135 KRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNF 194
+ K + +I+VP+S + IIGK GAT+K + ++ ++++ K +
Sbjct: 159 RVK---QAKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQ------ERV 209
Query: 195 VLISGESEAVKKAL 208
V ISGE E +KA+
Sbjct: 210 VTISGEPEQNRKAV 223
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS---SRGDRVALISGTPEQKRA 612
L+VL+P+ A G +IGK G + ++K +GATI++S SK +RV LI GT E
Sbjct: 65 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNG 124
Query: 613 AENLI 617
N I
Sbjct: 125 VHNFI 129
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS---SRGDRVALISGTPEQKRA 612
+E+ VP N VG ++GK G L ++++GA I++S +R I+G+P +A
Sbjct: 418 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGSPAATQA 477
Query: 613 AENLI 617
A+ LI
Sbjct: 478 AQYLI 482
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 557 EVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS--SRGDRVALISGTPEQKRAAE 614
+++VP + G +IGK G+ + + + SGA +++S + +RV ISG PEQ R A
Sbjct: 164 KIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTISGEPEQNRKAV 223
Query: 615 NLI 617
+I
Sbjct: 224 EII 226
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.313 0.133 0.372
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,021,966,063
Number of Sequences: 23463169
Number of extensions: 457506500
Number of successful extensions: 1134063
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1972
Number of HSP's successfully gapped in prelim test: 1479
Number of HSP's that attempted gapping in prelim test: 1094168
Number of HSP's gapped (non-prelim): 30650
length of query: 624
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 475
effective length of database: 8,863,183,186
effective search space: 4210012013350
effective search space used: 4210012013350
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 80 (35.4 bits)