BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006943
(624 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P58223|Y4837_ARATH KH domain-containing protein At4g18375 OS=Arabidopsis thaliana
GN=At4g18375 PE=2 SV=1
Length = 606
Score = 629 bits (1623), Expect = e-179, Method: Compositional matrix adjust.
Identities = 344/638 (53%), Positives = 441/638 (69%), Gaps = 46/638 (7%)
Query: 1 MGDSGKRYRSQRDNDRDGKNQKRRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVIN 60
M + KR + QR+N +NQKRRI+ D+ +E V+YRILCP V+G VIGKSGKVIN
Sbjct: 1 MVERKKRKQIQRNNSESNRNQKRRISH-DKINRDELVVYRILCPIDVVGGVIGKSGKVIN 59
Query: 61 SIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHA 120
+IR T+A++KV D G RV+TIY VK+K++ E+ ++ EPLC AQDALLKV+
Sbjct: 60 AIRHNTKAKIKVFDQLHGCSQRVITIYCSVKEKQE-EIGFTKSENEPLCCAQDALLKVYD 118
Query: 121 AI-ANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKD 179
AI A+ N T + R + +EC++LVP SQS+++IGKAG IKR+R +TR S+KV KD
Sbjct: 119 AIVASDEENNTKTNVDRDDNKECRLLVPFSQSSSLIGKAGENIKRIRRRTRASVKVVSKD 178
Query: 180 ASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKFSPREDIPLETTVREAP-PSII 238
S+P+H CAME+DN V+ISGE E+VK+ALFA+SAIMYK +PRE+IPL++T ++ P S+I
Sbjct: 179 VSDPSHVCAMEYDNVVVISGEPESVKQALFAVSAIMYKINPRENIPLDSTSQDVPAASVI 238
Query: 239 IPSDV--PIYPPGGLYPNADPILPSRS-VPSILGAARVPDLQGYADT-GNTWPVYSTGLS 294
+PSD+ +YP G Y N D IL + VPS A V D QGYA+T N PV+++ L
Sbjct: 239 VPSDLSNSVYPQTGFYSNQDHILQQGAGVPSYFNALSVSDFQGYAETAANPVPVFASSLP 298
Query: 295 LVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDD--TKDNRDE 352
+ G G+S+SEELV +VLCP I RVIGKGG TIK IR+ASG+ I+V+D TK DE
Sbjct: 299 VTHGFGGSSRSEELVFKVLCPLCNIMRVIGKGGSTIKRIREASGSCIEVNDSRTKCGDDE 358
Query: 353 CVITVTAIESPDDIKSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIIN 412
CVI VTA ESPDD+KSMAVEAVLLLQ INDED + V ++LLVSSKVIGC+IGKSGS+IN
Sbjct: 359 CVIIVTATESPDDMKSMAVEAVLLLQEYINDEDAENVKMQLLVSSKVIGCVIGKSGSVIN 418
Query: 413 EIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRD--G 470
EIRKRT A++ ISKG K D+LVEV GEV SVRDAL+QI+LRLR+D L D+D
Sbjct: 419 EIRKRTNANICISKGKK-------DDLVEVSGEVSSVRDALIQIVLRLREDVLGDKDSVA 471
Query: 471 SRNPPVGADHIY----SSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGY 526
+R PP D+ SS G ++P + S M S+S +GY
Sbjct: 472 TRKPPARTDNCSFLSGSSNAGYTLPSFMSS--------------------MASTSGFHGY 511
Query: 527 GSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGAT 586
GS GD+ GS YS YG LP LE+L+PA+A+ KV+GK G NL NIR+ISGA
Sbjct: 512 GSFPAGDNVLGSTGPYS---YGRLPSSSALEILIPAHAMSKVMGKGGGNLENIRRISGAM 568
Query: 587 IEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFIMAT 624
IE+S SK+S GD +AL+SGT EQ R AENL+QAF+M+T
Sbjct: 569 IEISASKTSHGDHIALLSGTLEQMRCAENLVQAFVMST 606
>sp|P57721|PCBP3_HUMAN Poly(rC)-binding protein 3 OS=Homo sapiens GN=PCBP3 PE=2 SV=2
Length = 371
Score = 96.7 bits (239), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 155/339 (45%), Gaps = 52/339 (15%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDD-- 365
L IR+L ++G +IGK G T+K +R+ SGA+I++ + N E ++T+T P D
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG---PTDAI 100
Query: 366 IKSMAVEAVLLLQTKINDEDDDT------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
K+ A+ A + IN + VT+RL+V + G +IGK GS I EIR+ T
Sbjct: 101 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 160
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNP-PVGA 478
A V+++ GD ++ + V + G ++ + QI + + + K P P
Sbjct: 161 AQVQVA-GDM--LPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPAST 217
Query: 479 DHIYSSGTG--------ISMPPLLPSI-------PPVGPLGYDQRADSGSGIGMLSSSSL 523
I++ G I P L + P PLG A G + + SS
Sbjct: 218 PVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEA 277
Query: 524 YGYGSLSMGDSPYGSMSSYSSKLYGGL---PPPLTLEVLVPANAVGKVIGKAGSNLANIR 580
MG S GL PP T E+ +P + +G +IG+ G+ + IR
Sbjct: 278 QNL----MGQS-------------SGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIR 320
Query: 581 KISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQA 619
++SGA I+++++ +R I+GTP A+ LI A
Sbjct: 321 QMSGAQIKIANATEGSSERQITITGTPANISLAQYLINA 359
Score = 73.6 bits (179), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 153/360 (42%), Gaps = 56/360 (15%)
Query: 23 RRINEK-DEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKD 81
RR+ K E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +
Sbjct: 31 RRMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPE 88
Query: 82 RVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIA-----NAVANATDNDKKR 136
R+VTI DA+ K A IA + + + +++
Sbjct: 89 RIVTI----------------------TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATS 126
Query: 137 KEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVL 196
K +++VP+SQ ++IGK G+ IK +R T ++V T + V
Sbjct: 127 KPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNST-------ERAVT 179
Query: 197 ISGESEAVKKALFAISAIMYKFSPR-EDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNA 255
ISG +A+ + + I +M + P+ IP P +I + Y G Y
Sbjct: 180 ISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTP---VIFAGGQAYTIQGQYAIP 236
Query: 256 DPILPSRSVPSILGAARVPDL--QGYADTGNTWPVYSTG-----LSLVSGLVGA--SQSE 306
P ++ + P L A G P++S+ + SGL + + +
Sbjct: 237 HPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTH 296
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
EL I P + IG +IG+ G I IRQ SGAQI + + + E IT+T +P +I
Sbjct: 297 ELTI----PNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITG--TPANI 350
Score = 51.2 bits (121), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+TIRLL+ K +G IIGK G + ++R+ + A + IS+G+ P + +V + G
Sbjct: 45 TLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCP------ERIVTITGPTD 98
Query: 448 SVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
++ A I + +D ++ + + PPV
Sbjct: 99 AIFKAFAMIAYKFEEDIINSMSNSPATSKPPV 130
Score = 36.6 bits (83), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 8/75 (10%)
Query: 548 GGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTP 607
GGL LT+ +L+ VG +IGK G + +R+ SGA I +S+ +R+ I+G
Sbjct: 40 GGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCP--ERIVTITG-- 95
Query: 608 EQKRAAENLIQAFIM 622
+ + +AF M
Sbjct: 96 ----PTDAIFKAFAM 106
>sp|P57722|PCBP3_MOUSE Poly(rC)-binding protein 3 OS=Mus musculus GN=Pcbp3 PE=2 SV=3
Length = 371
Score = 96.7 bits (239), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 155/339 (45%), Gaps = 52/339 (15%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDD-- 365
L IR+L ++G +IGK G T+K +R+ SGA+I++ + N E ++T+T P D
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG---PTDAI 100
Query: 366 IKSMAVEAVLLLQTKINDEDDDT------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
K+ A+ A + IN + VT+RL+V + G +IGK GS I EIR+ T
Sbjct: 101 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 160
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNP-PVGA 478
A V+++ GD ++ + V + G ++ + QI + + + K P P
Sbjct: 161 AQVQVA-GDM--LPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPAST 217
Query: 479 DHIYSSGTG--------ISMPPLLPSI-------PPVGPLGYDQRADSGSGIGMLSSSSL 523
I++ G I P L + P PLG A G + + SS
Sbjct: 218 PVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEA 277
Query: 524 YGYGSLSMGDSPYGSMSSYSSKLYGGL---PPPLTLEVLVPANAVGKVIGKAGSNLANIR 580
MG S GL PP T E+ +P + +G +IG+ G+ + IR
Sbjct: 278 QNL----MGQS-------------SGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIR 320
Query: 581 KISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQA 619
++SGA I+++++ +R I+GTP A+ LI A
Sbjct: 321 QMSGAQIKIANATEGSSERQITITGTPANISLAQYLINA 359
Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 149/353 (42%), Gaps = 55/353 (15%)
Query: 29 DEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYS 88
E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R+VTI
Sbjct: 38 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTI-- 93
Query: 89 HVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIA-----NAVANATDNDKKRKEKEECQ 143
DA+ K A IA + + + +++ K +
Sbjct: 94 --------------------TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLR 133
Query: 144 ILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEA 203
++VP+SQ ++IGK G+ IK +R T ++V T + V ISG +A
Sbjct: 134 LVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNST-------ERAVTISGTPDA 186
Query: 204 VKKALFAISAIMYKFSPR-EDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSR 262
+ + + I +M + P+ IP P +I + Y G Y P ++
Sbjct: 187 IIQCVKQICVVMLESPPKGATIPYRPKPASTP---VIFAGGQAYTIQGQYAIPHPDQLTK 243
Query: 263 SVPSILGAARVPDL--QGYADTGNTWPVYSTG-----LSLVSGLVGA--SQSEELVIRVL 313
+ P L A G P++S+ + SGL + + + EL I
Sbjct: 244 LHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTI--- 300
Query: 314 CPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
P + IG +IG+ G I IRQ SGAQI + + + E IT+T +P +I
Sbjct: 301 -PNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITG--TPANI 350
Score = 51.2 bits (121), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+TIRLL+ K +G IIGK G + ++R+ + A + IS+G+ P + +V + G
Sbjct: 45 TLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCP------ERIVTITGPTD 98
Query: 448 SVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
++ A I + +D ++ + + PPV
Sbjct: 99 AIFKAFAMIAYKFEEDIINSMSNSPATSKPPV 130
Score = 38.5 bits (88), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 58/138 (42%), Gaps = 35/138 (25%)
Query: 485 GTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSS 544
G I PP+LP S +G LS +G G M S S
Sbjct: 4 GDAIWAPPILPH----------------STLGTLSHHPELHFG---------GKMESKVS 38
Query: 545 KLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALIS 604
+ GGL LT+ +L+ VG +IGK G + +R+ SGA I +S+ +R+ I+
Sbjct: 39 E--GGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCP--ERIVTIT 94
Query: 605 GTPEQKRAAENLIQAFIM 622
G + + +AF M
Sbjct: 95 G------PTDAIFKAFAM 106
>sp|Q0VCU0|PCBP4_BOVIN Poly(rC)-binding protein 4 OS=Bos taurus GN=PCBP4 PE=2 SV=1
Length = 403
Score = 85.5 bits (210), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 155/329 (47%), Gaps = 52/329 (15%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
L +R+L ++G +IGK G T+K IR+ S A+I + + + E + T+T
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE--GSCPERITTITGS------T 69
Query: 368 SMAVEAVLLLQTKINDED------------DDTVTIRLLVSSKVIGCIIGKSGSIINEIR 415
+ AV ++ K+ DED VT+RL++ + G +IGK+G+ I EIR
Sbjct: 70 AAVFHAVSMIAFKL-DEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIR 128
Query: 416 KRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPP 475
+ T A V+++ P ++ + V V G V DA++ + ++ L+ +PP
Sbjct: 129 ETTGAQVQVAGDLLP---NSTERAVTVSG----VPDAIILCVRQICAVILE------SPP 175
Query: 476 VGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSP 535
GA Y +S+ +L L +Q G ++ + + LS P
Sbjct: 176 KGATIPYHPS--LSLGTVL--------LSTNQGFSVQGQYGTVTPAEVTKLQQLSGHAVP 225
Query: 536 YGSMSSYSSKLYGGLPPPL---TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDS 592
+ S S + GL P + E LVP + +G VIG+ GS ++ IR++SGA I++ +
Sbjct: 226 FASPS-----MVPGLDPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQ 280
Query: 593 KSSRGDRVALISGTPEQKRAAENLIQAFI 621
G+R I+G+P A+ LI A +
Sbjct: 281 AEGAGERHVTITGSPVSIALAQYLITACL 309
Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 133/324 (41%), Gaps = 49/324 (15%)
Query: 36 SVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKED 95
++ R+L +GS+IGK G+ + IR+++ AR+ + + +R+ TI
Sbjct: 17 TLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGSTAAVFH 74
Query: 96 VEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANII 155
F E LCAA + + ++++P+SQ ++I
Sbjct: 75 AVSMIAFKLDEDLCAA-----------------PANGGNVSRPPVTLRLVIPASQCGSLI 117
Query: 156 GKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIM 215
GKAG IK +R T ++V T + V +SG +A+ + I A++
Sbjct: 118 GKAGTKIKEIRETTGAQVQVAGDLLPNST-------ERAVTVSGVPDAIILCVRQICAVI 170
Query: 216 YKFSPR-EDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVP 274
+ P+ IP ++ ++ S + G Y P A V
Sbjct: 171 LESPPKGATIPYHPSLSLG---TVLLSTNQGFSVQGQYGTVTP-------------AEVT 214
Query: 275 DLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIR 334
LQ +G+ P S S+V GL ++Q+ L P + IG VIG+ G I IR
Sbjct: 215 KLQQL--SGHAVPFASP--SMVPGLDPSTQTSSQ--EFLVPNDLIGCVIGRQGSKISEIR 268
Query: 335 QASGAQIDVDDTKDNRDECVITVT 358
Q SGA I + + + E +T+T
Sbjct: 269 QMSGAHIKIGNQAEGAGERHVTIT 292
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 384 EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVV 443
E T+T+R+L+ K +G IIGK G + IR+++ A + IS+G P + + +
Sbjct: 13 ELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCP------ERITTIT 66
Query: 444 GEVGSVRDALVQIILRLRDD 463
G +V A+ I +L +D
Sbjct: 67 GSTAAVFHAVSMIAFKLDED 86
>sp|Q5SF07|IF2B2_MOUSE Insulin-like growth factor 2 mRNA-binding protein 2 OS=Mus musculus
GN=Igf2bp2 PE=1 SV=1
Length = 592
Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 150/327 (45%), Gaps = 49/327 (14%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSM 369
+R+L P +G +IGK G TIK+I + + +++D+ K+N VT +P+ S
Sbjct: 189 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHR-KENSGAAEKPVTIHATPEGT-SE 246
Query: 370 AVEAVLLLQTKINDEDD--DTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKG 427
A +L + K DE + V +++L + +G +IGK G + +I T + IS
Sbjct: 247 ACRMILEIMQKEADETKLAEEVPLKILAHNGFVGRLIGKEGRNLKKIEHETGTKITISSL 306
Query: 428 DKPKCADANDELVEVVGEVGSVRDALVQIILRLRD----DALK-DRDGSRNPPVGADHIY 482
+ + + V G + + +A ++I+ +LR+ D L ++ + P + +
Sbjct: 307 QDLSIYNP-ERTITVRGTIEACANAEIEIMKKLREAFENDMLAVNQQANLIPGLNLSALG 365
Query: 483 SSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSY 542
TG+S+ P PP GP G + S Y P+ + S Y
Sbjct: 366 IFSTGLSVLP-----PPAGPRG-------------VPPSPPY---------HPFATHSGY 398
Query: 543 SSKLYG-----------GLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSD 591
S LY P T+ + +P AVG +IGK G+++ + + +GA+I+++
Sbjct: 399 FSSLYPHHHFGPFPHHHSYPEQETVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAP 458
Query: 592 SKS-SRGDRVALISGTPEQKRAAENLI 617
++ +R+ +I+G PE + A+ I
Sbjct: 459 AEGPDVSERMVIITGPPEAQFKAQGRI 485
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 93/427 (21%), Positives = 173/427 (40%), Gaps = 58/427 (13%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKEDVEV 98
RIL P +G++IGK G I +I ++T++RV + GA ++ VTI++
Sbjct: 190 RILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHA---------- 239
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
E A +L++ A+ + K E+ +IL + +IGK
Sbjct: 240 -----TPEGTSEACRMILEIMQKEAD--------ETKLAEEVPLKILAHNGFVGRLIGKE 286
Query: 159 GATIKRLRSKTRTSIKVTP-KDAS--EPTHSCAMEFDNFVLISGESEAVKKALFAISAIM 215
G +K++ +T T I ++ +D S P + + + E E +KK A M
Sbjct: 287 GRNLKKIEHETGTKITISSLQDLSIYNPERTITVRGTIEACANAEIEIMKKLREAFENDM 346
Query: 216 YKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPD 275
+ + ++ P + + + G++ +LP + P G P
Sbjct: 347 LAVNQQANLI---------PGLNLSAL-------GIFSTGLSVLPPPAGPR--GVPPSPP 388
Query: 276 LQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQ 335
+A + S E+ + + P +G +IGK G IK + +
Sbjct: 389 YHPFATHSGYFSSLYPHHHFGPFPHHHSYPEQETVSLFIPTQAVGAIIGKKGAHIKQLAR 448
Query: 336 ASGAQIDVDDTK--DNRDECVITVTAIESPDDIKSMA---VEAVLLLQTKINDEDDDTVT 390
+GA I + + D + VI I P + + A + L + N +++ +
Sbjct: 449 FAGASIKIAPAEGPDVSERMVI----ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLE 504
Query: 391 IRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDE-LVEVVGEVGSV 449
+ V S G +IGK G +NE++ T A+V + + P D N+E +V ++G +
Sbjct: 505 AHIRVPSSTAGRVIGKGGKTVNELQNLTSAEVIVPRDQTP---DENEEVIVRIIGHFFAS 561
Query: 450 RDALVQI 456
+ A +I
Sbjct: 562 QTAQRKI 568
Score = 34.3 bits (77), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 25/46 (54%)
Query: 27 EKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKV 72
E DE E V +IL +G +G +IGK G+ + I ET ++ +
Sbjct: 258 EADETKLAEEVPLKILAHNGFVGRLIGKEGRNLKKIEHETGTKITI 303
>sp|P57724|PCBP4_MOUSE Poly(rC)-binding protein 4 OS=Mus musculus GN=Pcbp4 PE=2 SV=1
Length = 403
Score = 84.0 bits (206), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 92/336 (27%), Positives = 157/336 (46%), Gaps = 52/336 (15%)
Query: 301 GASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAI 360
G S L +R+L ++G +IGK G T+K IR+ S A+I + + + E + T+T
Sbjct: 11 GPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE--GSCPERITTITGS 68
Query: 361 ESPDDIKSMAVEAVLLLQTKINDED------------DDTVTIRLLVSSKVIGCIIGKSG 408
+ AV ++ K+ DED VT+RL++ + G +IGK+G
Sbjct: 69 ------TAAVFHAVSMIAFKL-DEDLCAAPANGGSVSRPPVTLRLVIPASQCGSLIGKAG 121
Query: 409 SIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDR 468
+ I EIR+ T A V+++ P ++ + V V G V DA++ + ++ L+
Sbjct: 122 TKIKEIRETTGAQVQVAGDLLP---NSTERAVTVSG----VPDAIILCVRQICAVILE-- 172
Query: 469 DGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGS 528
+PP GA Y +S+ +L L +Q G ++ + +
Sbjct: 173 ----SPPKGATIPYHPS--LSLGTVL--------LSANQGFSVQGQYGAVTPAEVTKLQQ 218
Query: 529 LSMGDSPYGSMSSYSSKLYGGLPPPL---TLEVLVPANAVGKVIGKAGSNLANIRKISGA 585
LS P+ S S + G+ P + E LVP + +G VIG+ GS ++ IR++SGA
Sbjct: 219 LSGHAVPFASPS-----VVPGMDPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGA 273
Query: 586 TIEMSDSKSSRGDRVALISGTPEQKRAAENLIQAFI 621
I++ + G+R I+G+P A+ LI A +
Sbjct: 274 HIKIGNQAEGAGERHVTITGSPVSIALAQYLITACL 309
Score = 66.6 bits (161), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 137/332 (41%), Gaps = 51/332 (15%)
Query: 30 EKGNEESVIY--RILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIY 87
E+G E S+ R+L +GS+IGK G+ + IR+++ AR+ + + +R+ TI
Sbjct: 9 EEGPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTIT 66
Query: 88 SHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVP 147
F E LCAA + + ++++P
Sbjct: 67 GSTAAVFHAVSMIAFKLDEDLCAA-----------------PANGGSVSRPPVTLRLVIP 109
Query: 148 SSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKA 207
+SQ ++IGKAG IK +R T ++V T + V +SG +A+
Sbjct: 110 ASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNST-------ERAVTVSGVPDAIILC 162
Query: 208 LFAISAIMYKFSPR-EDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPS 266
+ I A++ + P+ IP ++ ++ S + G Y P
Sbjct: 163 VRQICAVILESPPKGATIPYHPSLSLG---TVLLSANQGFSVQGQYGAVTP--------- 210
Query: 267 ILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKG 326
A V LQ +G+ P S S+V G+ ++Q+ L P + IG VIG+
Sbjct: 211 ----AEVTKLQQL--SGHAVPFASP--SVVPGMDPSTQTSSQ--EFLVPNDLIGCVIGRQ 260
Query: 327 GGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
G I IRQ SGA I + + + E +T+T
Sbjct: 261 GSKISEIRQMSGAHIKIGNQAEGAGERHVTIT 292
>sp|P57723|PCBP4_HUMAN Poly(rC)-binding protein 4 OS=Homo sapiens GN=PCBP4 PE=2 SV=1
Length = 403
Score = 83.6 bits (205), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 155/329 (47%), Gaps = 52/329 (15%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
L +R+L ++G +IGK G T+K IR+ S A+I + + + E + T+T
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE--GSCPERITTITGS------T 69
Query: 368 SMAVEAVLLLQTKINDED------------DDTVTIRLLVSSKVIGCIIGKSGSIINEIR 415
+ AV ++ K+ DED VT+RL++ + G +IGK+G+ I EIR
Sbjct: 70 AAVFHAVSMIAFKL-DEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIR 128
Query: 416 KRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPP 475
+ T A V+++ P ++ + V V G V DA++ + ++ L+ +PP
Sbjct: 129 ETTGAQVQVAGDLLP---NSTERAVTVSG----VPDAIILCVRQICAVILE------SPP 175
Query: 476 VGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSP 535
GA Y +S+ +L L +Q G ++ + + LS P
Sbjct: 176 KGATIPYHPS--LSLGTVL--------LSANQGFSVQGQYGAVTPAEVTKLQQLSSHAVP 225
Query: 536 YGSMSSYSSKLYGGLPPPL---TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDS 592
+ + S + GL P + E LVP + +G VIG+ GS ++ IR++SGA I++ +
Sbjct: 226 FATPS-----VVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQ 280
Query: 593 KSSRGDRVALISGTPEQKRAAENLIQAFI 621
G+R I+G+P A+ LI A +
Sbjct: 281 AEGAGERHVTITGSPVSIALAQYLITACL 309
Score = 62.8 bits (151), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 133/339 (39%), Gaps = 79/339 (23%)
Query: 36 SVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKED 95
++ R+L +GS+IGK G+ + IR+++ AR+ + + +R+ TI
Sbjct: 17 TLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGSTAAVFH 74
Query: 96 VEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANII 155
F E LCAA + + ++++P+SQ ++I
Sbjct: 75 AVSMIAFKLDEDLCAA-----------------PANGGNVSRPPVTLRLVIPASQCGSLI 117
Query: 156 GKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIM 215
GKAG IK +R T ++V T + V +SG +A+ + I A++
Sbjct: 118 GKAGTKIKEIRETTGAQVQVAGDLLPNST-------ERAVTVSGVPDAIILCVRQICAVI 170
Query: 216 YKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPD 275
+ P+ + +P + PS S+ ++L +A
Sbjct: 171 LESPPKG------------------ATIPYH-------------PSLSLGTVLLSAN--- 196
Query: 276 LQGYA---DTGNTWPVYSTGL-------------SLVSGLVGASQSEELVIRVLCPFNKI 319
QG++ G P T L S+V GL +Q+ L P + I
Sbjct: 197 -QGFSVQGQYGAVTPAEVTKLQQLSSHAVPFATPSVVPGLDPGTQTSSQ--EFLVPNDLI 253
Query: 320 GRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
G VIG+ G I IRQ SGA I + + + E +T+T
Sbjct: 254 GCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTIT 292
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 384 EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVV 443
E T+T+R+L+ K +G IIGK G + IR+++ A + IS+G P + + +
Sbjct: 13 ELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCP------ERITTIT 66
Query: 444 GEVGSVRDALVQIILRLRDD 463
G +V A+ I +L +D
Sbjct: 67 GSTAAVFHAVSMIAFKLDED 86
>sp|O19048|PCBP1_RABIT Poly(rC)-binding protein 1 OS=Oryctolagus cuniculus GN=PCBP1 PE=2
SV=1
Length = 356
Score = 82.8 bits (203), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 158/347 (45%), Gaps = 50/347 (14%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
L IR+L ++G +IGK G ++K IR+ SGA+I++ + N E +IT+T P +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIITLTG---PTNAI 68
Query: 368 SMAVEAVL-LLQTKINDEDDDT-------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
A ++ L+ IN ++ VT+RL+V + G +IGK G I EIR+ T
Sbjct: 69 FKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTG 128
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDG--------- 470
A V+++ P ++ + + + G SV + + QI L + + + G
Sbjct: 129 AQVQVAGDMLP---NSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQP 185
Query: 471 --SRNPPV---GADHI-----YSSGTG-ISMPPL-------LPSIPPVGPLGYDQRADSG 512
+ +P + G D Y T + PPL +I P+ +Q A
Sbjct: 186 MPASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISPLDLAKLNQVARQQ 245
Query: 513 SGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKA 572
S M+ + G+ + DS + Y + L T E+ +P N +G +IG+
Sbjct: 246 SHFAMMHGGT--GFAGI---DSSSPEVKGYWASLDAST--QTTHELTIPNNLIGCIIGRQ 298
Query: 573 GSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQA 619
G+N+ IR++SGA I++++ R I+G+ A+ LI A
Sbjct: 299 GANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLINA 345
Score = 60.1 bits (144), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 81/363 (22%), Positives = 145/363 (39%), Gaps = 73/363 (20%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH 89
E G ++ R+L +GS+IGK G+ + IR+E+ AR+ + + +R++T
Sbjct: 7 ESGLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIIT---- 60
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAV-----ANATDNDKKRKEKEECQI 144
L +A+ K A I + + ++ T++ + ++
Sbjct: 61 ------------------LTGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRL 102
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAV 204
+VP++Q ++IGK G IK +R T ++V T + + I+G ++V
Sbjct: 103 VVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNST-------ERAITIAGVPQSV 155
Query: 205 KKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGL--------YPNAD 256
+ + I +M + + T+ P +P+ P+ GG YP+A
Sbjct: 156 TECVKQICLVMLETLSQSPQGRVMTIPYQP----MPASSPVICAGGQDRCSDAAGYPHAT 211
Query: 257 PIL--PSRSVPSILGAARV-----PDLQGYADTGNTWPVYSTGLSLV------------- 296
L P SI G + L A + + + G
Sbjct: 212 HDLEGPPLDAYSIQGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYW 271
Query: 297 SGLVGASQ-SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVI 355
+ L ++Q + EL I P N IG +IG+ G I IRQ SGAQI + + + +
Sbjct: 272 ASLDASTQTTHELTI----PNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQV 327
Query: 356 TVT 358
T+T
Sbjct: 328 TIT 330
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 9/92 (9%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+TIRLL+ K +G IIGK G + IR+ + A + IS+G+ P + ++ + G
Sbjct: 13 TLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCP------ERIITLTGPTN 66
Query: 448 SVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
++ A II +L +D ++ + + PPV
Sbjct: 67 AIFKAFAMIIDKLEEDINSSMTNSTAASRPPV 98
Score = 34.7 bits (78), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 549 GLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISG 605
GL LT+ +L+ VG +IGK G ++ IR+ SGA I +S+ +R+ ++G
Sbjct: 9 GLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCP--ERIITLTG 63
>sp|P60335|PCBP1_MOUSE Poly(rC)-binding protein 1 OS=Mus musculus GN=Pcbp1 PE=1 SV=1
Length = 356
Score = 82.8 bits (203), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 158/347 (45%), Gaps = 50/347 (14%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
L IR+L ++G +IGK G ++K IR+ SGA+I++ + N E +IT+T P +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIITLTG---PTNAI 68
Query: 368 SMAVEAVL-LLQTKINDEDDDT-------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
A ++ L+ IN ++ VT+RL+V + G +IGK G I EIR+ T
Sbjct: 69 FKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTG 128
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDG--------- 470
A V+++ P ++ + + + G SV + + QI L + + + G
Sbjct: 129 AQVQVAGDMLP---NSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQP 185
Query: 471 --SRNPPV---GADHI-----YSSGTG-ISMPPL-------LPSIPPVGPLGYDQRADSG 512
+ +P + G D Y T + PPL +I P+ +Q A
Sbjct: 186 MPASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISPLDLAKLNQVARQQ 245
Query: 513 SGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKA 572
S M+ + G+ + DS + Y + L T E+ +P N +G +IG+
Sbjct: 246 SHFAMMHGGT--GFAGI---DSSSPEVKGYWASLDAST--QTTHELTIPNNLIGCIIGRQ 298
Query: 573 GSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQA 619
G+N+ IR++SGA I++++ R I+G+ A+ LI A
Sbjct: 299 GANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLINA 345
Score = 60.1 bits (144), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 81/363 (22%), Positives = 145/363 (39%), Gaps = 73/363 (20%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH 89
E G ++ R+L +GS+IGK G+ + IR+E+ AR+ + + +R++T
Sbjct: 7 ESGLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIIT---- 60
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAV-----ANATDNDKKRKEKEECQI 144
L +A+ K A I + + ++ T++ + ++
Sbjct: 61 ------------------LTGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRL 102
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAV 204
+VP++Q ++IGK G IK +R T ++V T + + I+G ++V
Sbjct: 103 VVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNST-------ERAITIAGVPQSV 155
Query: 205 KKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGL--------YPNAD 256
+ + I +M + + T+ P +P+ P+ GG YP+A
Sbjct: 156 TECVKQICLVMLETLSQSPQGRVMTIPYQP----MPASSPVICAGGQDRCSDAAGYPHAT 211
Query: 257 PIL--PSRSVPSILGAARV-----PDLQGYADTGNTWPVYSTGLSLV------------- 296
L P SI G + L A + + + G
Sbjct: 212 HDLEGPPLDAYSIQGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYW 271
Query: 297 SGLVGASQ-SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVI 355
+ L ++Q + EL I P N IG +IG+ G I IRQ SGAQI + + + +
Sbjct: 272 ASLDASTQTTHELTI----PNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQV 327
Query: 356 TVT 358
T+T
Sbjct: 328 TIT 330
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 9/92 (9%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+TIRLL+ K +G IIGK G + IR+ + A + IS+G+ P + ++ + G
Sbjct: 13 TLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCP------ERIITLTGPTN 66
Query: 448 SVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
++ A II +L +D ++ + + PPV
Sbjct: 67 AIFKAFAMIIDKLEEDINSSMTNSTAASRPPV 98
Score = 34.7 bits (78), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 549 GLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISG 605
GL LT+ +L+ VG +IGK G ++ IR+ SGA I +S+ +R+ ++G
Sbjct: 9 GLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCP--ERIITLTG 63
>sp|Q15365|PCBP1_HUMAN Poly(rC)-binding protein 1 OS=Homo sapiens GN=PCBP1 PE=1 SV=2
Length = 356
Score = 82.8 bits (203), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 158/347 (45%), Gaps = 50/347 (14%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
L IR+L ++G +IGK G ++K IR+ SGA+I++ + N E +IT+T P +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIITLTG---PTNAI 68
Query: 368 SMAVEAVL-LLQTKINDEDDDT-------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
A ++ L+ IN ++ VT+RL+V + G +IGK G I EIR+ T
Sbjct: 69 FKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTG 128
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDG--------- 470
A V+++ P ++ + + + G SV + + QI L + + + G
Sbjct: 129 AQVQVAGDMLP---NSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQP 185
Query: 471 --SRNPPV---GADHI-----YSSGTG-ISMPPL-------LPSIPPVGPLGYDQRADSG 512
+ +P + G D Y T + PPL +I P+ +Q A
Sbjct: 186 MPASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISPLDLAKLNQVARQQ 245
Query: 513 SGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKA 572
S M+ + G+ + DS + Y + L T E+ +P N +G +IG+
Sbjct: 246 SHFAMMHGGT--GFAGI---DSSSPEVKGYWASLDAST--QTTHELTIPNNLIGCIIGRQ 298
Query: 573 GSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQA 619
G+N+ IR++SGA I++++ R I+G+ A+ LI A
Sbjct: 299 GANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLINA 345
Score = 60.1 bits (144), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 81/363 (22%), Positives = 145/363 (39%), Gaps = 73/363 (20%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH 89
E G ++ R+L +GS+IGK G+ + IR+E+ AR+ + + +R++T
Sbjct: 7 ESGLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIIT---- 60
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAV-----ANATDNDKKRKEKEECQI 144
L +A+ K A I + + ++ T++ + ++
Sbjct: 61 ------------------LTGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRL 102
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAV 204
+VP++Q ++IGK G IK +R T ++V T + + I+G ++V
Sbjct: 103 VVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNST-------ERAITIAGVPQSV 155
Query: 205 KKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGL--------YPNAD 256
+ + I +M + + T+ P +P+ P+ GG YP+A
Sbjct: 156 TECVKQICLVMLETLSQSPQGRVMTIPYQP----MPASSPVICAGGQDRCSDAAGYPHAT 211
Query: 257 PIL--PSRSVPSILGAARV-----PDLQGYADTGNTWPVYSTGLSLV------------- 296
L P SI G + L A + + + G
Sbjct: 212 HDLEGPPLDAYSIQGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYW 271
Query: 297 SGLVGASQ-SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVI 355
+ L ++Q + EL I P N IG +IG+ G I IRQ SGAQI + + + +
Sbjct: 272 ASLDASTQTTHELTI----PNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQV 327
Query: 356 TVT 358
T+T
Sbjct: 328 TIT 330
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 9/92 (9%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+TIRLL+ K +G IIGK G + IR+ + A + IS+G+ P + ++ + G
Sbjct: 13 TLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCP------ERIITLTGPTN 66
Query: 448 SVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
++ A II +L +D ++ + + PPV
Sbjct: 67 AIFKAFAMIIDKLEEDINSSMTNSTAASRPPV 98
Score = 34.7 bits (78), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 549 GLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISG 605
GL LT+ +L+ VG +IGK G ++ IR+ SGA I +S+ +R+ ++G
Sbjct: 9 GLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCP--ERIITLTG 63
>sp|Q5E9A3|PCBP1_BOVIN Poly(rC)-binding protein 1 OS=Bos taurus GN=PCBP1 PE=2 SV=1
Length = 356
Score = 82.8 bits (203), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 158/347 (45%), Gaps = 50/347 (14%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
L IR+L ++G +IGK G ++K IR+ SGA+I++ + N E +IT+T P +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIITLTG---PTNAI 68
Query: 368 SMAVEAVL-LLQTKINDEDDDT-------VTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
A ++ L+ IN ++ VT+RL+V + G +IGK G I EIR+ T
Sbjct: 69 FKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTG 128
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDG--------- 470
A V+++ P ++ + + + G SV + + QI L + + + G
Sbjct: 129 AQVQVAGDMLP---NSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQP 185
Query: 471 --SRNPPV---GADHI-----YSSGTG-ISMPPL-------LPSIPPVGPLGYDQRADSG 512
+ +P + G D Y T + PPL +I P+ +Q A
Sbjct: 186 MPASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISPLDLAKLNQVARQQ 245
Query: 513 SGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKA 572
S M+ + G+ + DS + Y + L T E+ +P N +G +IG+
Sbjct: 246 SHFAMMHGGT--GFAGI---DSSSPEVKGYWASLDAST--QTTHELTIPNNLIGCIIGRQ 298
Query: 573 GSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQA 619
G+N+ IR++SGA I++++ R I+G+ A+ LI A
Sbjct: 299 GANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLINA 345
Score = 60.1 bits (144), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 81/363 (22%), Positives = 145/363 (39%), Gaps = 73/363 (20%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH 89
E G ++ R+L +GS+IGK G+ + IR+E+ AR+ + + +R++T
Sbjct: 7 ESGLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIIT---- 60
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAV-----ANATDNDKKRKEKEECQI 144
L +A+ K A I + + ++ T++ + ++
Sbjct: 61 ------------------LTGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRL 102
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAV 204
+VP++Q ++IGK G IK +R T ++V T + + I+G ++V
Sbjct: 103 VVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNST-------ERAITIAGVPQSV 155
Query: 205 KKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGL--------YPNAD 256
+ + I +M + + T+ P +P+ P+ GG YP+A
Sbjct: 156 TECVKQICLVMLETLSQSPQGRVMTIPYQP----MPASSPVICAGGQDRCSDAAGYPHAT 211
Query: 257 PIL--PSRSVPSILGAARV-----PDLQGYADTGNTWPVYSTGLSLV------------- 296
L P SI G + L A + + + G
Sbjct: 212 HDLEGPPLDAYSIQGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYW 271
Query: 297 SGLVGASQ-SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVI 355
+ L ++Q + EL I P N IG +IG+ G I IRQ SGAQI + + + +
Sbjct: 272 ASLDASTQTTHELTI----PNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQV 327
Query: 356 TVT 358
T+T
Sbjct: 328 TIT 330
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 9/92 (9%)
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVG 447
T+TIRLL+ K +G IIGK G + IR+ + A + IS+G+ P + ++ + G
Sbjct: 13 TLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCP------ERIITLTGPTN 66
Query: 448 SVRDALVQIILRLRDD---ALKDRDGSRNPPV 476
++ A II +L +D ++ + + PPV
Sbjct: 67 AIFKAFAMIIDKLEEDINSSMTNSTAASRPPV 98
Score = 34.7 bits (78), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 549 GLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISG 605
GL LT+ +L+ VG +IGK G ++ IR+ SGA I +S+ +R+ ++G
Sbjct: 9 GLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCP--ERIITLTG 63
>sp|Q9PW80|IF2B3_DANRE Insulin-like growth factor 2 mRNA-binding protein 3 OS=Danio rerio
GN=igf2bp3 PE=1 SV=1
Length = 582
Score = 79.3 bits (194), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 147/318 (46%), Gaps = 51/318 (16%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSM 369
+R+L P +G +IGK G TI++I + + ++ID+ K+N +T +P+ S
Sbjct: 197 LRLLVPTQFVGAIIGKEGATIRNITKQTHSKIDIH-RKENAGAAEKPITVHSTPEGCSSA 255
Query: 370 AVEAVLLLQ-----TKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRI 424
+ ++Q TKI +E + +++L + +G +IGK G + +I + T + I
Sbjct: 256 CRNIMEIMQKEAIDTKITEE----IPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITI 311
Query: 425 SKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSS 484
S + + + V G + + A +I+ ++R+ D V A H+ S+
Sbjct: 312 SPLQDLTLYNP-ERTITVKGTLDACAKAEEEIMKKVRESYEND--------VAAMHLQSN 362
Query: 485 GTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSS 544
L+P + + + +G+ ++ G + P G+ + Y S
Sbjct: 363 --------LIPGL-------------NLNALGLFPGAASGGISPSVVSGPPPGAQAGYQS 401
Query: 545 KLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMS-----DSKSSRGDR 599
+G T+ + +PA AVG +IGK G ++ + + +GA+I+++ D+K R
Sbjct: 402 --FGAQMESETVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPADGIDAK----QR 455
Query: 600 VALISGTPEQKRAAENLI 617
+ +ISG PE + A+ I
Sbjct: 456 MVIISGPPEAQFKAQGRI 473
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 94/415 (22%), Positives = 165/415 (39%), Gaps = 81/415 (19%)
Query: 37 VIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKED 95
V R+L P +G++IGK G I +I ++T +++ + GA ++ +T++S
Sbjct: 195 VPLRLLVPTQFVGAIIGKEGATIRNITKQTHSKIDIHRKENAGAAEKPITVHS------- 247
Query: 96 VEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANII 155
E +A ++++ A D K E+ +IL ++ +I
Sbjct: 248 --------TPEGCSSACRNIMEIMQKEAI--------DTKITEEIPLKILAHNNFVGRLI 291
Query: 156 GKAGATIKRLRSKTRTSIKVTP-KDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAI 214
GK G +K++ T T I ++P +D + + + + G +A KA I
Sbjct: 292 GKEGRNLKKIEQDTDTKITISPLQDLT------LYNPERTITVKGTLDACAKAE---EEI 342
Query: 215 MYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSV----PSILGA 270
M K RE + S +IP GL NA + P + PS++
Sbjct: 343 MKKV--RESYENDVAAMHLQ-SNLIP---------GLNLNALGLFPGAASGGISPSVVSG 390
Query: 271 ARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTI 330
GY G +Q E + + P +G +IGK G I
Sbjct: 391 PPPGAQAGYQSFG-------------------AQMESETVHLFIPALAVGAIIGKQGQHI 431
Query: 331 KSIRQASGAQIDVD--DTKDNRDECVITVTAIESPDDIKSMA---VEAVLLLQTKINDED 385
K + + +GA I + D D + VI I P + + A + L + ++
Sbjct: 432 KQLSRFAGASIKIAPADGIDAKQRMVI----ISGPPEAQFKAQGRIFGKLKEENFFGPKE 487
Query: 386 DDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELV 440
+ + + V S G +IGK G +NE++ T A+V + + P D ND++V
Sbjct: 488 EVKLEAHIKVPSFAAGRVIGKGGKTVNELQNLTSAEVVVPRDQTP---DENDQVV 539
Score = 40.0 bits (92), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 59/149 (39%), Gaps = 26/149 (17%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPG--AKDRVVTIYSHVKD 92
ES + P +G++IGK G+ I + + A +K+ P G AK R+V I
Sbjct: 407 ESETVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKIA-PADGIDAKQRMVII------ 459
Query: 93 KEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSA 152
+A K I + K + K E I VPS +
Sbjct: 460 ----------------SGPPEAQFKAQGRIFGKLKEENFFGPKEEVKLEAHIKVPSFAAG 503
Query: 153 NIIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+IGK G T+ L++ T + V P+D +
Sbjct: 504 RVIGKGGKTVNELQNLTSAEV-VVPRDQT 531
Score = 37.7 bits (86), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 299 LVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDV--DDTKDNRDECVIT 356
G + +L + P GRVIGKGG T+ ++ + A++ V D T D D+ V+
Sbjct: 482 FFGPKEEVKLEAHIKVPSFAAGRVIGKGGKTVNELQNLTSAEVVVPRDQTPDENDQVVVK 541
Query: 357 VT 358
+T
Sbjct: 542 IT 543
Score = 33.1 bits (74), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 14/83 (16%)
Query: 527 GSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGAT 586
GS S+G P KL +P L +LVP VG +IGK G+ + NI K + +
Sbjct: 181 GSPSLGARP---------KLQSDVP----LRLLVPTQFVGAIIGKEGATIRNITKQTHSK 227
Query: 587 IEMSDSKSS-RGDRVALISGTPE 608
I++ +++ ++ + TPE
Sbjct: 228 IDIHRKENAGAAEKPITVHSTPE 250
>sp|Q9Y6M1|IF2B2_HUMAN Insulin-like growth factor 2 mRNA-binding protein 2 OS=Homo sapiens
GN=IGF2BP2 PE=1 SV=2
Length = 599
Score = 77.0 bits (188), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 152/333 (45%), Gaps = 41/333 (12%)
Query: 301 GASQSEE--LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
G SQ+ + +R+L P +G +IGK G TIK+I + + +++D+ K+N VT
Sbjct: 185 GTSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHR-KENSGAAEKPVT 243
Query: 359 AIESPDDIKSMAVEAVLLLQTKINDEDD--DTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
+P+ S A +L + K DE + + +++L + ++G +IGK G + +I
Sbjct: 244 IHATPEGT-SEACRMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEH 302
Query: 417 RTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPV 476
T + IS + + + V G V + A ++I+ +LR+ A ++ + N
Sbjct: 303 ETGTKITISSLQDLSIYNP-ERTITVKGTVEACASAEIEIMKKLRE-AFENDMLAVNQQA 360
Query: 477 GADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPY 536
L+P + + LG +G+ +LS + + P+
Sbjct: 361 N---------------LIPGLN-LSALGI-----FSTGLSVLSPPAGPRGAPPAAPYHPF 399
Query: 537 GSMSSYSSKLY-----------GGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGA 585
+ S Y S LY P + + +P AVG +IGK G+++ + + +GA
Sbjct: 400 TTHSGYFSSLYPHHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGA 459
Query: 586 TIEMSDSKS-SRGDRVALISGTPEQKRAAENLI 617
+I+++ ++ +R+ +I+G PE + A+ I
Sbjct: 460 SIKIAPAEGPDVSERMVIITGPPEAQFKAQGRI 492
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 88/393 (22%), Positives = 153/393 (38%), Gaps = 91/393 (23%)
Query: 142 CQILVPSSQSANIIGKAGATIKRLRSKTRT-----------------SIKVTPKDASEPT 184
+ILVP+ IIGK G TIK + +T++ +I TP+ SE
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTSE-- 253
Query: 185 HSCAMEFDNFVLISGESEAVKKA------LFAISAIMYKFSPREDIPLETTVREAPPSII 238
+C M + ++ E++ K A + A + ++ + +E L+ E I
Sbjct: 254 -ACRMILE---IMQKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKIT 309
Query: 239 IPS--DVPIYPPGGLYPNADPILPSRS----VPSILGAARVPDLQGYADTGNTWP----- 287
I S D+ IY P + S + L A D+ N P
Sbjct: 310 ISSLQDLSIYNPERTITVKGTVEACASAEIEIMKKLREAFENDMLAVNQQANLIPGLNLS 369
Query: 288 ---VYSTGLSLVS---------------------GLVGA--------------SQSEELV 309
++STGLS++S G + S E+ +
Sbjct: 370 ALGIFSTGLSVLSPPAGPRGAPPAAPYHPFTTHSGYFSSLYPHHQFGPFPHHHSYPEQEI 429
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTK--DNRDECVITVTAIESPDDIK 367
+ + P +G +IGK G IK + + +GA I + + D + VI I P + +
Sbjct: 430 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVI----ITGPPEAQ 485
Query: 368 SMA---VEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRI 424
A + L + N +++ + + V S G +IGK G +NE++ T A+V +
Sbjct: 486 FKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEVIV 545
Query: 425 SKGDKPKCADANDE-LVEVVGEVGSVRDALVQI 456
+ P D N+E +V ++G + + A +I
Sbjct: 546 PRDQTP---DENEEVIVRIIGHFFASQTAQRKI 575
Score = 43.5 bits (101), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 10/97 (10%)
Query: 138 EKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLI 197
E+E + +P+ IIGK GA IK+L SIK+ P + + + + V+I
Sbjct: 426 EQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVS-------ERMVII 478
Query: 198 SGESEAVKKALFAISAIMYK---FSPREDIPLETTVR 231
+G EA KA I + + F+P+E++ LE +R
Sbjct: 479 TGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIR 515
Score = 41.6 bits (96), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 58/148 (39%), Gaps = 24/148 (16%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPF-PGAKDRVVTIYSHVKDK 93
E I + P +G++IGK G I + + A +K+ P +R+V I
Sbjct: 426 EQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII------- 478
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
+A K I + + K + K E I VPSS +
Sbjct: 479 ---------------TGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGR 523
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+IGK G T+ L++ T + + P+D +
Sbjct: 524 VIGKGGKTVNELQNLTSAEV-IVPRDQT 550
Score = 38.9 bits (89), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 63/138 (45%), Gaps = 24/138 (17%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKEDVEV 98
RIL P +G++IGK G I +I ++T++RV + GA ++ VTI++
Sbjct: 197 RILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHA---------- 246
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
E A +L++ A ++ K E+ +IL + +IGK
Sbjct: 247 -----TPEGTSEACRMILEIMQKEA--------DETKLAEEIPLKILAHNGLVGRLIGKE 293
Query: 159 GATIKRLRSKTRTSIKVT 176
G +K++ +T T I ++
Sbjct: 294 GRNLKKIEHETGTKITIS 311
Score = 34.3 bits (77), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 26/46 (56%)
Query: 27 EKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKV 72
E DE E + +IL +G++G +IGK G+ + I ET ++ +
Sbjct: 265 EADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITI 310
>sp|Q61990|PCBP2_MOUSE Poly(rC)-binding protein 2 OS=Mus musculus GN=Pcbp2 PE=1 SV=1
Length = 362
Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 167/354 (47%), Gaps = 41/354 (11%)
Query: 297 SGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVIT 356
+G++ + L IR+L ++G +IGK G ++K +R+ SGA+I++ + N E +IT
Sbjct: 3 TGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIIT 60
Query: 357 VTAIESPDDIKSMAVEAVL-LLQTKINDEDDDT-------VTIRLLVSSKVIGCIIGKSG 408
+ P + A ++ L+ I+ ++ VT+RL+V + G +IGK G
Sbjct: 61 LAG---PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGG 117
Query: 409 SIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKD- 467
I EIR+ T A V+++ P ++ + + + G S+ + + QI + + + K
Sbjct: 118 CKIKEIRESTGAQVQVAGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLESPPKGV 174
Query: 468 ----RDGSRNPPV---GADHIYSSGT-GISMPPLLPSI--------PPVGPLGYD-QRAD 510
R + PV G YS+G+ S P PS+ PP+ Q A
Sbjct: 175 TIPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAI 234
Query: 511 SGSGIGMLSSSSLY-GYGSLSMGDSPYGSMSSYSSKL---YGGL---PPPLTLEVLVPAN 563
+ L ++ + ++ G++ + + S S ++ + GL + E+ +P +
Sbjct: 235 PQPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPND 294
Query: 564 AVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLI 617
+G +IG+ G+ + IR++SGA I++++ DR I+G+ A+ LI
Sbjct: 295 LIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLI 348
Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 84/373 (22%), Positives = 153/373 (41%), Gaps = 88/373 (23%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH 89
E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R++T
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIIT---- 60
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAV-----ANATDNDKKRKEKEECQI 144
L +A+ K A I + + ++ T++ + ++
Sbjct: 61 ------------------LAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRL 102
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAV 204
+VP+SQ ++IGK G IK +R T ++V T + + I+G +++
Sbjct: 103 VVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNST-------ERAITIAGIPQSI 155
Query: 205 KKALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGL-----------YP 253
+ + I +M + P+ T+ P PS P+ GG +P
Sbjct: 156 IECVKQICVVMLESPPK-----GVTIPYRPK----PSSSPVIFAGGQDRYSTGSDSASFP 206
Query: 254 NADPIL--------PSRSVPSILGAARVPD-----LQGYADTGNTWPVY--STGLSLV-- 296
+ P + P +I G +P L A + +P+ +TG S +
Sbjct: 207 HTTPSMCLNPDLEGPPLEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSGIES 266
Query: 297 ---------SGLVGASQ--SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDD 345
+GL ++Q S EL I P + IG +IG+ G I IRQ SGAQI + +
Sbjct: 267 SSPEVKGYWAGLDASAQTTSHELTI----PNDLIGCIIGRQGAKINEIRQMSGAQIKIAN 322
Query: 346 TKDNRDECVITVT 358
+ + +T+T
Sbjct: 323 PVEGSTDRQVTIT 335
>sp|Q15366|PCBP2_HUMAN Poly(rC)-binding protein 2 OS=Homo sapiens GN=PCBP2 PE=1 SV=1
Length = 365
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 167/357 (46%), Gaps = 44/357 (12%)
Query: 297 SGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVIT 356
+G++ + L IR+L ++G +IGK G ++K +R+ SGA+I++ + N E +IT
Sbjct: 3 TGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIIT 60
Query: 357 VTAIESPDDIKSMAVEAVL-LLQTKINDEDDDT-------VTIRLLVSSKVIGCIIGKSG 408
+ P + A ++ L+ I+ ++ VT+RL+V + G +IGK G
Sbjct: 61 LAG---PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGG 117
Query: 409 SIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDD----- 463
I EIR+ T A V+++ P ++ + + + G S+ + + QI + + +
Sbjct: 118 CKIKEIRESTGAQVQVAGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLETLSQSP 174
Query: 464 ----ALKDRDGSRNPPV---GADHIYSSGT-GISMPPLLPSI--------PPVGPLGYD- 506
+ R + PV G YS+G+ S P PS+ PP+
Sbjct: 175 PKGVTIPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQG 234
Query: 507 QRADSGSGIGMLSSSSLY-GYGSLSMGDSPYGSMSSYSSKL--YGGL---PPPLTLEVLV 560
Q A + L ++ + ++ G++ + + S S ++ Y GL + E+ +
Sbjct: 235 QYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWGLDASAQTTSHELTI 294
Query: 561 PANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLI 617
P + +G +IG+ G+ + IR++SGA I++++ DR I+G+ A+ LI
Sbjct: 295 PNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLI 351
Score = 65.9 bits (159), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 86/378 (22%), Positives = 153/378 (40%), Gaps = 93/378 (24%)
Query: 30 EKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSH 89
E G ++ R+L +GS+IGK G+ + +R+E+ AR+ + + +R++T
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIIT---- 60
Query: 90 VKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAV-----ANATDNDKKRKEKEECQI 144
L +A+ K A I + + ++ T++ + ++
Sbjct: 61 ------------------LAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRL 102
Query: 145 LVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAV 204
+VP+SQ ++IGK G IK +R T ++V T + + I+G +++
Sbjct: 103 VVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNST-------ERAITIAGIPQSI 155
Query: 205 KKALFAISAIMYKFSPREDIPLETTVREAPPSIII-----PSDVPIYPPGGL-------- 251
+ + I +M LET + P + I PS P+ GG
Sbjct: 156 IECVKQICVVM----------LETLSQSPPKGVTIPYRPKPSSSPVIFAGGQDRYSTGSD 205
Query: 252 ---YPNADPIL--------PSRSVPSILGAARVPD-----LQGYADTGNTWPVY--STGL 293
+P+ P + P +I G +P L A + +P+ +TG
Sbjct: 206 SASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGF 265
Query: 294 SLVS----------GLVGASQ--SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQI 341
S + GL ++Q S EL I P + IG +IG+ G I IRQ SGAQI
Sbjct: 266 SGIESSSPEVKGYWGLDASAQTTSHELTI----PNDLIGCIIGRQGAKINEIRQMSGAQI 321
Query: 342 DVDDTKDNRDECVITVTA 359
+ + + + +T+T
Sbjct: 322 KIANPVEGSTDRQVTITG 339
>sp|O42254|IF2B1_CHICK Insulin-like growth factor 2 mRNA-binding protein 1 OS=Gallus
gallus GN=IGF2BP1 PE=1 SV=1
Length = 576
Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 151/335 (45%), Gaps = 54/335 (16%)
Query: 292 GLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRD 351
G + +G Q ++ +R+L P +G +IGK G TI++I + + ++IDV K+N
Sbjct: 180 GSPVTAGAPVKQQPVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDV-HRKENAG 238
Query: 352 ECVITVTAIESPDDIKSMAVEAVLLLQTKIND-EDDDTVTIRLLVSSKVIGCIIGKSGSI 410
++ +P+ + + ++Q + D + D V +++L + +G +IGK G
Sbjct: 239 AAEKAISIHSTPEGCSAACKMILEIMQKEAKDTKTADEVPLKILAHNNFVGRLIGKEGRN 298
Query: 411 INEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDG 470
+ ++ + T+ + IS + + + V G + + A +I+ ++R+ D
Sbjct: 299 LKKVEQDTETKITISSLQDLTLYNP-ERTITVKGSIENCCKAEQEIMKKVREAYEND--- 354
Query: 471 SRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGML--SSSSLYGYGS 528
V A + S L+P + + + +G+ SS+++ S
Sbjct: 355 -----VAAMSLQSH--------LIPGL-------------NLAAVGLFPASSNAVPPPPS 388
Query: 529 LSMGDSPYGSMSSYSSKLYGGLPPPL-TLEVLVPANAVGKVIGKAGSNLANIRKISGATI 587
G +PY S +PP T+ V +PA AVG +IGK G ++ + + + A+I
Sbjct: 389 SVSGAAPYSSF----------MPPEQETVHVFIPAQAVGAIIGKKGQHIKQLSRFASASI 438
Query: 588 -----EMSDSKSSRGDRVALISGTPEQKRAAENLI 617
E DSK R+ +I+G PE + A+ I
Sbjct: 439 KIAPPETPDSKV----RMVVITGPPEAQFKAQGRI 469
Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 95/437 (21%), Positives = 178/437 (40%), Gaps = 96/437 (21%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKEDVEV 98
R+L P +G++IGK G I +I ++T++++ V GA ++ ++I+S
Sbjct: 199 RLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISIHS---------- 248
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
E AA +L++ A D K ++ +IL ++ +IGK
Sbjct: 249 -----TPEGCSAACKMILEIMQKEAK--------DTKTADEVPLKILAHNNFVGRLIGKE 295
Query: 159 GATIKRLRSKTRTSIKVTP-KDAS--EPTHSCAMEFDNFVLISGESEAVKKALFAISAIM 215
G +K++ T T I ++ +D + P + ++ E E +KK A
Sbjct: 296 GRNLKKVEQDTETKITISSLQDLTLYNPERTITVKGSIENCCKAEQEIMKKVREAYE--- 352
Query: 216 YKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYP---NADPILPSRSVPSILGAAR 272
D+ + P + + + GL+P NA P PS S+ GAA
Sbjct: 353 ------NDVAAMSLQSHLIPGLNLAAV-------GLFPASSNAVPPPPS----SVSGAAP 395
Query: 273 VPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKS 332
YS+ + E+ + V P +G +IGK G IK
Sbjct: 396 ----------------YSSFMP----------PEQETVHVFIPAQAVGAIIGKKGQHIKQ 429
Query: 333 IRQASGAQIDVD--DTKDNRDECVITVTAIESPDDIKSMA---VEAVLLLQTKINDEDDD 387
+ + + A I + +T D++ V+ I P + + A + L + +++
Sbjct: 430 LSRFASASIKIAPPETPDSKVRMVV----ITGPPEAQFKAQGRIYGKLKEENFFGPKEEV 485
Query: 388 TVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDE-LVEVVGEV 446
+ + V + G +IGK G +NE++ T A+V + + P D N++ +V+++G
Sbjct: 486 KLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQTP---DENEQVIVKIIGHF 542
Query: 447 GS-------VRDALVQI 456
+ +RD L Q+
Sbjct: 543 YASQMAQRKIRDILAQV 559
Score = 42.7 bits (99), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 59/148 (39%), Gaps = 24/148 (16%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDP-FPGAKDRVVTIYSHVKDK 93
E + P +G++IGK G+ I + + A +K+ P P +K R+V I
Sbjct: 403 EQETVHVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVVI------- 455
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
+A K I + K + K E I VP+S +
Sbjct: 456 ---------------TGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGR 500
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+IGK G T+ L++ T + V P+D +
Sbjct: 501 VIGKGGKTVNELQNLTAAEV-VVPRDQT 527
Score = 36.2 bits (82), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 38/208 (18%), Positives = 87/208 (41%), Gaps = 50/208 (24%)
Query: 305 SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD----NRDECVITVTAI 360
++E+ +++L N +GR+IGK G +K + Q + +I + +D N + + +I
Sbjct: 274 ADEVPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYNPERTITVKGSI 333
Query: 361 ES----------------PDDIKSMAVEAVL-----LLQTKINDEDDDTV---------- 389
E+ +D+ +M++++ L L + + V
Sbjct: 334 ENCCKAEQEIMKKVREAYENDVAAMSLQSHLIPGLNLAAVGLFPASSNAVPPPPSSVSGA 393
Query: 390 ------------TIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADAND 437
T+ + + ++ +G IIGK G I ++ + A ++I+ P+ D+
Sbjct: 394 APYSSFMPPEQETVHVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIA---PPETPDSKV 450
Query: 438 ELVEVVGEVGSVRDALVQIILRLRDDAL 465
+V + G + A +I +L+++
Sbjct: 451 RMVVITGPPEAQFKAQGRIYGKLKEENF 478
>sp|Q5RB68|IF2B2_PONAB Insulin-like growth factor 2 mRNA-binding protein 2 OS=Pongo abelii
GN=IGF2BP2 PE=2 SV=1
Length = 556
Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/322 (22%), Positives = 138/322 (42%), Gaps = 62/322 (19%)
Query: 301 GASQSEEL--VIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVT 358
G SQ+ ++ +R+L P +G +IGK G TIK+I + + +++D+ K+N VT
Sbjct: 185 GTSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDI-HRKENSGAAEKPVT 243
Query: 359 AIESPDDIKSMAVEAVLLLQTKINDEDD--DTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
+P+ S A +L + K DE + + +++L + ++G +IGK G + +I
Sbjct: 244 IHATPEGT-SEACRMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEH 302
Query: 417 RTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPV 476
T + IS + + + V G V + A ++I+ +LR+ D
Sbjct: 303 ETGTKITISSLQDLSIYNP-ERTITVKGTVEACASAEIEIMKKLREAFEND--------- 352
Query: 477 GADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPY 536
ML+ ++ GY S +
Sbjct: 353 ----------------------------------------MLAVNTHSGYFSSLYPHHQF 372
Query: 537 GSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS-S 595
G + S P + + +P AVG +IGK G+++ + + +GA+I+++ ++
Sbjct: 373 GPFPHHHS-----YPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPD 427
Query: 596 RGDRVALISGTPEQKRAAENLI 617
+R+ +I+G PE + A+ I
Sbjct: 428 VSERMVIITGPPEAQFKAQGRI 449
Score = 57.4 bits (137), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 100/218 (45%), Gaps = 23/218 (10%)
Query: 27 EKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKV---VDPFPGAKDRV 83
E DE E + +IL +G++G +IGK G+ + I ET ++ + D +R
Sbjct: 265 EADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERT 324
Query: 84 VTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKV--HAAIANAVANATD-----NDKKR 136
+T+ V+ E++ +E A ++ +L V H+ +++ +
Sbjct: 325 ITVKGTVEACASAEIEIMKKLRE---AFENDMLAVNTHSGYFSSLYPHHQFGPFPHHHSY 381
Query: 137 KEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVL 196
E+E + +P+ IIGK GA IK+L SIK+ P + + + + V+
Sbjct: 382 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVS-------ERMVI 434
Query: 197 ISGESEAVKKALFAISAIMYK---FSPREDIPLETTVR 231
I+G EA KA I + + F+P+E++ LE +R
Sbjct: 435 ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIR 472
Score = 53.5 bits (127), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 80/357 (22%), Positives = 146/357 (40%), Gaps = 62/357 (17%)
Query: 142 CQILVPSSQSANIIGKAGATIKRLRSKTRT-----------------SIKVTPKDASEPT 184
+ILVP+ IIGK G TIK + +T++ +I TP+ SE
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTSE-- 253
Query: 185 HSCAMEFDNFVLISGESEAVKKA------LFAISAIMYKFSPREDIPLETTVREAPPSII 238
+C M + ++ E++ K A + A + ++ + +E L+ E I
Sbjct: 254 -ACRMILE---IMQKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKIT 309
Query: 239 IPS--DVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQGYADTG-NTWPVYSTGLSL 295
I S D+ IY N + + + +A + ++ + N +T
Sbjct: 310 ISSLQDLSIY-------NPERTITVKGTVEACASAEIEIMKKLREAFENDMLAVNTHSGY 362
Query: 296 VSGLVGASQS----------EELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDD 345
S L Q E+ ++ + P +G +IGK G IK + + +GA I +
Sbjct: 363 FSSLYPHHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAP 422
Query: 346 TK--DNRDECVITVTAIESPDDIKSMA---VEAVLLLQTKINDEDDDTVTIRLLVSSKVI 400
+ D + VI I P + + A + L + N +++ + + V S
Sbjct: 423 AEGPDVSERMVI----ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTA 478
Query: 401 GCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDE-LVEVVGEVGSVRDALVQI 456
G +IGK G +NE++ T A+V + + P D N+E +V ++G + + A +I
Sbjct: 479 GRVIGKGGKTVNELQNLTSAEVIVPRDQTP---DENEEVIVRIIGHFFASQTAQRKI 532
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 80/355 (22%), Positives = 144/355 (40%), Gaps = 70/355 (19%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKEDVEV 98
RIL P +G++IGK G I +I ++T++RV + GA ++ VTI++
Sbjct: 197 RILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHA---------- 246
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
E A +L++ A ++ K E+ +IL + +IGK
Sbjct: 247 -----TPEGTSEACRMILEIMQKEA--------DETKLAEEIPLKILAHNGLVGRLIGKE 293
Query: 159 GATIKRLRSKTRTSIKVTP-KDAS--EPTHSCAMEFDNFVLISGESEAVKKALFAISAIM 215
G +K++ +T T I ++ +D S P + ++ S E E +KK A M
Sbjct: 294 GRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGTVEACASAEIEIMKKLREAFENDM 353
Query: 216 YKFSPREDIPLETTVREAPPSIIIP-SDVPIYPPGGLYPNADPI---LPSRSVPSILG-- 269
L S + P +P YP + + +P+++V +I+G
Sbjct: 354 ----------LAVNTHSGYFSSLYPHHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKK 403
Query: 270 AARVPDLQGYADTG-----NTWPVYSTGLSLVSG-----------LVGASQSE------- 306
A + L +A P S + +++G + G + E
Sbjct: 404 GAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKAQGRIFGKLKEENFFNPKE 463
Query: 307 --ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDV--DDTKDNRDECVITV 357
+L + P + GRVIGKGG T+ ++ + A++ V D T D +E ++ +
Sbjct: 464 EVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEVIVPRDQTPDENEEVIVRI 518
Score = 41.2 bits (95), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 58/148 (39%), Gaps = 24/148 (16%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPF-PGAKDRVVTIYSHVKDK 93
E I + P +G++IGK G I + + A +K+ P +R+V I
Sbjct: 383 EQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII------- 435
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
+A K I + + K + K E I VPSS +
Sbjct: 436 ---------------TGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGR 480
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+IGK G T+ L++ T + + P+D +
Sbjct: 481 VIGKGGKTVNELQNLTSAEV-IVPRDQT 507
>sp|Q8CGX0|IF2B1_RAT Insulin-like growth factor 2 mRNA-binding protein 1 OS=Rattus
norvegicus GN=Igf2bp1 PE=1 SV=1
Length = 577
Score = 70.5 bits (171), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 148/332 (44%), Gaps = 47/332 (14%)
Query: 292 GLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRD 351
G + +G Q ++ +R+L P +G +IGK G TI++I + + ++IDV K+N
Sbjct: 180 GSPVAAGAPAKQQQVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDV-HRKENAG 238
Query: 352 ECVITVTAIESPDDIKSMAVEAVLLLQTKIND-EDDDTVTIRLLVSSKVIGCIIGKSGSI 410
++ +P+ S + ++ + D + D V +++L + +G +IGK G
Sbjct: 239 AAEKAISVHSTPEGCSSACKMILEIMHKEAKDTKTADEVPLKILAHNNFVGRLIGKEGRN 298
Query: 411 INEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDG 470
+ ++ + T+ + IS + + + V G + + A +I+ ++R+ D
Sbjct: 299 LKKVEQDTETKITISSLQDLTLYNP-ERTITVKGAIENCCRAEQEIMKKVREAYEND--- 354
Query: 471 SRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLS 530
V A + S L+P + + G+ SSS++ S
Sbjct: 355 -----VAAMSLQSH--------LIPGL-----------NLAAVGLFPASSSAVPPPPSSV 390
Query: 531 MGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATI--- 587
G +PYGS + P ++V +PA AVG +IGK G ++ + + + A+I
Sbjct: 391 TGAAPYGS--------FMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIA 442
Query: 588 --EMSDSKSSRGDRVALISGTPEQKRAAENLI 617
E DSK R+ +I+G PE + A+ I
Sbjct: 443 PPETPDSKV----RMVVITGPPEAQFKAQGRI 470
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 94/438 (21%), Positives = 174/438 (39%), Gaps = 97/438 (22%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKEDVEV 98
R+L P +G++IGK G I +I ++T++++ V GA ++ ++++S
Sbjct: 199 RLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHS---------- 248
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
E +A +L+ + + D K ++ +IL ++ +IGK
Sbjct: 249 -----TPEGCSSACKMILE--------IMHKEAKDTKTADEVPLKILAHNNFVGRLIGKE 295
Query: 159 GATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESE-----AVKKALFAISA 213
G +K++ T T I ++ + L + E A++ A
Sbjct: 296 GRNLKKVEQDTETKITIS-------------SLQDLTLYNPERTITVKGAIENCCRAEQE 342
Query: 214 IMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPN--ADPILPSRSVPSILGAA 271
IM K VREA Y N A L S +P L A
Sbjct: 343 IMKK------------VREA------------------YENDVAAMSLQSHLIPG-LNLA 371
Query: 272 RVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIK 331
V + P TG + + A + E +++V P +G +IGK G IK
Sbjct: 372 AVGLFPASSSAVPPPPSSVTGAAPYGSFMQAPEQE--MVQVFIPAQAVGAIIGKKGQHIK 429
Query: 332 SIRQASGAQIDVD--DTKDNRDECVITVTAIESPDDIKSMA---VEAVLLLQTKINDEDD 386
+ + + A I + +T D++ V+ I P + + A + L + +++
Sbjct: 430 QLSRFASASIKIAPPETPDSKVRMVV----ITGPPEAQFKAQGRIYGKLKEENFFGPKEE 485
Query: 387 DTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDE-LVEVVGE 445
+ + V + G +IGK G +NE++ T A+V + + P D ND+ +V+++G
Sbjct: 486 VKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQTP---DENDQVIVKIIGH 542
Query: 446 VGS-------VRDALVQI 456
+ +RD L Q+
Sbjct: 543 FYASQMAQRKIRDILAQV 560
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 95/248 (38%), Gaps = 67/248 (27%)
Query: 28 KDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKV---VDPFPGAKDRVV 84
KD K +E V +IL + +G +IGK G+ + + Q+T ++ + D +R +
Sbjct: 269 KDTKTADE-VPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYNPERTI 327
Query: 85 TIYSHVKDKEDVEVDDEFNDKEPLC-AAQDALLKVHAAIANAVANATDNDK--------- 134
T+ + E C A Q+ + KV A N VA +
Sbjct: 328 TVKGAI---------------ENCCRAEQEIMKKVREAYENDVAAMSLQSHLIPGLNLAA 372
Query: 135 ----------------------------KRKEKEECQILVPSSQSANIIGKAGATIKRLR 166
+ E+E Q+ +P+ IIGK G IK+L
Sbjct: 373 VGLFPASSSAVPPPPSSVTGAAPYGSFMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLS 432
Query: 167 SKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYK---FSPRED 223
SIK+ P + P M V+I+G EA KA I + + F P+E+
Sbjct: 433 RFASASIKIAPPET--PDSKVRM-----VVITGPPEAQFKAQGRIYGKLKEENFFGPKEE 485
Query: 224 IPLETTVR 231
+ LET +R
Sbjct: 486 VKLETHIR 493
Score = 43.1 bits (100), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 24/148 (16%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDP-FPGAKDRVVTIYSHVKDK 93
E + ++ P +G++IGK G+ I + + A +K+ P P +K R+V I
Sbjct: 404 EQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVVI------- 456
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
+A K I + K + K E I VP+S +
Sbjct: 457 ---------------TGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGR 501
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+IGK G T+ L++ T + V P+D +
Sbjct: 502 VIGKGGKTVNELQNLTAAEV-VVPRDQT 528
>sp|O57526|IF23B_XENLA Insulin-like growth factor 2 mRNA-binding protein 3-B OS=Xenopus
laevis GN=igf2bp3-b PE=1 SV=1
Length = 593
Score = 69.7 bits (169), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/313 (21%), Positives = 144/313 (46%), Gaps = 36/313 (11%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
E+ +R+L P +G +IGK G TI++I + + ++ID+ K+N +T +P+
Sbjct: 204 EVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHR-KENAGAAEKPITIHSTPEGC 262
Query: 367 KSMAVEAVLLLQTKINDED-DDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRIS 425
+ + ++Q + D + + +++L + +G +IGK G + +I + T + IS
Sbjct: 263 SAACKIIMEIMQKEAQDTKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITIS 322
Query: 426 KGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSG 485
+ + + V G + + A +++ ++R+ D + A ++ +
Sbjct: 323 PLQDLTLYNP-ERTITVKGSIETCAKAEEEVMKKIRESYEND--------IAAMNLQAH- 372
Query: 486 TGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSK 545
L+P + + + +G+ SS + SP +S S
Sbjct: 373 -------LIPGL-------------NLNALGLFPPSSSGMPPPSAGVSSP---TTSASYP 409
Query: 546 LYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGD-RVALIS 604
+G P T+ + +PA AVG +IGK G ++ + + +GA+I+++ ++ R+ +I+
Sbjct: 410 PFGQQPESETVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKLRMVIIT 469
Query: 605 GTPEQKRAAENLI 617
G PE + A+ I
Sbjct: 470 GPPEAQFKAQGRI 482
Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 91/416 (21%), Positives = 167/416 (40%), Gaps = 78/416 (18%)
Query: 34 EESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKD 92
+ V R+L P +G++IGK G I +I ++T++++ + GA ++ +TI+S
Sbjct: 202 QSEVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAEKPITIHS---- 257
Query: 93 KEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSA 152
E AA ++++ A D K E+ +IL ++
Sbjct: 258 -----------TPEGCSAACKIIMEIMQKEAQ--------DTKFTEEIPLKILAHNNFVG 298
Query: 153 NIIGKAGATIKRLRSKTRTSIKVTP-KDAS--EPTHSCAMEFDNFVLISGESEAVKKALF 209
+IGK G +K++ T T I ++P +D + P + ++ E E +KK
Sbjct: 299 RLIGKEGRNLKKIEQDTDTKITISPLQDLTLYNPERTITVKGSIETCAKAEEEVMKK--- 355
Query: 210 AISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILG 269
+RE+ + I ++ + GL NA + P S
Sbjct: 356 --------------------IRESYENDIAAMNLQAHLIPGLNLNALGLFPPSSSGMPPP 395
Query: 270 AARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGT 329
+A V T ++P + Q E + + P +G +IGK G
Sbjct: 396 SAGVSS----PTTSASYPPF------------GQQPESETVHLFIPALAVGAIIGKQGQH 439
Query: 330 IKSIRQASGAQIDVDDTK--DNRDECVITVTAIESPDDIKSMA---VEAVLLLQTKINDE 384
IK + + +GA I + + D + VI I P + + A + L + +
Sbjct: 440 IKQLSRFAGASIKIAPAEGPDAKLRMVI----ITGPPEAQFKAQGRIYGKLKEENFFGPK 495
Query: 385 DDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELV 440
++ + + V S G +IGK G +NE++ T A+V + + P D ND++V
Sbjct: 496 EEVKLEAHIKVPSYAAGRVIGKGGKTVNELQNLTSAEVVVPRDQTP---DENDQVV 548
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/210 (20%), Positives = 87/210 (41%), Gaps = 54/210 (25%)
Query: 305 SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD----NRDECVITVTAI 360
+EE+ +++L N +GR+IGK G +K I Q + +I + +D N + + +I
Sbjct: 283 TEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQDLTLYNPERTITVKGSI 342
Query: 361 ES----------------PDDIKSMAVEAVLLLQTKIN---------------------- 382
E+ +DI +M ++A L+ +N
Sbjct: 343 ETCAKAEEEVMKKIRESYENDIAAMNLQAHLIPGLNLNALGLFPPSSSGMPPPSAGVSSP 402
Query: 383 ---------DEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCA 433
+ ++ T+ L + + +G IIGK G I ++ + A ++I+ + P
Sbjct: 403 TTSASYPPFGQQPESETVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPAEGP--- 459
Query: 434 DANDELVEVVGEVGSVRDALVQIILRLRDD 463
DA +V + G + A +I +L+++
Sbjct: 460 DAKLRMVIITGPPEAQFKAQGRIYGKLKEE 489
>sp|O74919|RNC1_SCHPO RNA-binding protein rnc1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=rnc1 PE=1 SV=1
Length = 398
Score = 69.7 bits (169), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 145/332 (43%), Gaps = 56/332 (16%)
Query: 305 SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPD 364
+++L +R L + G +IGK G + +R + + V N + V+T++ P
Sbjct: 91 TQQLTLRALLSTREAGIIIGKAGKNVAELRSTTNVKAGVTKAVPNVHDRVLTISG---PL 147
Query: 365 DIKSMAVEAVLLLQTKINDEDDDTVT-------IRLLVSSKVIGCIIGKSGSIINEIRKR 417
+ A ++ + K + D T + +RLL++ ++G IIG++G I I+ +
Sbjct: 148 ENVVRAYRFIIDIFAKNSTNPDGTPSDANTPRKLRLLIAHSLMGSIIGRNGLRIKLIQDK 207
Query: 418 TKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVG 477
+ SK P+ + + VE+ G V ++ A+ +I L DD + G
Sbjct: 208 CSCRMIASKDMLPQ---STERTVEIHGTVDNLHAAIWEIGKCLIDDWER----------G 254
Query: 478 ADHI-YSSGTGISMPPLLPSI----------PPVGPLGYDQRADSGSGIGMLSSSSLYGY 526
A + Y+ + ++ P LPS+ PP P + SG + + YG
Sbjct: 255 AGTVFYNPVSRLTQP--LPSLASTASPQQVSPPAAP-------STTSGEAIPENFVSYGA 305
Query: 527 GSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGAT 586
P+ P +T + +PA+ VG +IG+ GS ++ IR+ SG+
Sbjct: 306 QVFPATQMPFLQQ------------PKVTQNISIPADMVGCIIGRGGSKISEIRRTSGSK 353
Query: 587 IEMS-DSKSSRGDRVALISGTPEQKRAAENLI 617
I ++ + G+R+ I+GT E+ A L+
Sbjct: 354 ISIAKEPHDETGERMFTITGTHEENEKALFLL 385
Score = 47.0 bits (110), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 77/366 (21%), Positives = 134/366 (36%), Gaps = 77/366 (21%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKE 94
+ + R L G +IGK+GK + +R T + V P DRV+TI +++
Sbjct: 92 QQLTLRALLSTREAGIIIGKAGKNVAELRSTTNVKAGVTKAVPNVHDRVLTISGPLEN-- 149
Query: 95 DVEVDDEFNDKEPLCAAQDALLKVHAAIA-NAVANATDNDKKRKEKEECQILVPSSQSAN 153
+ A ++ + A + N +D + RK ++L+ S +
Sbjct: 150 -------------VVRAYRFIIDIFAKNSTNPDGTPSDANTPRK----LRLLIAHSLMGS 192
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAI-- 211
IIG+ G IK ++ K + + KD + V I G + + A++ I
Sbjct: 193 IIGRNGLRIKLIQDKCSCRM-IASKDM------LPQSTERTVEIHGTVDNLHAAIWEIGK 245
Query: 212 ----------SAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPS 261
+ Y R PL + A P + P P G P +
Sbjct: 246 CLIDDWERGAGTVFYNPVSRLTQPLPSLASTASPQQVSPPAAPSTTSGEAIPENFVSYGA 305
Query: 262 RSVPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGR 321
+ P A ++P LQ T N + P + +G
Sbjct: 306 QVFP----ATQMPFLQQPKVTQN---------------------------ISIPADMVGC 334
Query: 322 VIGKGGGTIKSIRQASGAQIDV-DDTKDNRDECVITVTAIESPDDIKSMAVEAVLLLQTK 380
+IG+GG I IR+ SG++I + + D E + T+T ++ +A+ LL +
Sbjct: 335 IIGRGGSKISEIRRTSGSKISIAKEPHDETGERMFTITGTHEENE------KALFLLYQQ 388
Query: 381 INDEDD 386
+ E D
Sbjct: 389 LEMEKD 394
Score = 37.4 bits (85), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 6/67 (8%)
Query: 554 LTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAA 613
LTL L+ G +IGKAG N+A +R + ++ + + DRV ISG
Sbjct: 94 LTLRALLSTREAGIIIGKAGKNVAELRSTTNVKAGVTKAVPNVHDRVLTISG------PL 147
Query: 614 ENLIQAF 620
EN+++A+
Sbjct: 148 ENVVRAY 154
>sp|Q08CK7|IF2B1_DANRE Insulin-like growth factor 2 mRNA-binding protein 1 OS=Danio rerio
GN=igf2bp1 PE=1 SV=1
Length = 598
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 153/336 (45%), Gaps = 52/336 (15%)
Query: 290 STGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDN 349
S +S SG+ Q ++ +R+L P +G +IGK G TI++I + + ++IDV K+N
Sbjct: 181 SRQMSPGSGIPSKHQHADIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDV-HRKEN 239
Query: 350 RDECVITVTAIESPDDIKSMAVEAVLLLQTKINDEDDDTVT-----IRLLVSSKVIGCII 404
++ +P+ S A +L + +N E DT T +++L + +G +I
Sbjct: 240 AGAAEKPISIHSTPEGC-SAACRMILEI---MNQEAKDTKTADEVPLKVLAHNNFVGRLI 295
Query: 405 GKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDA 464
GK G + ++ + T + IS + + + V G + + A +I+ ++R +A
Sbjct: 296 GKEGRNLKKVEQDTDTKITISPLQDLTLYNP-ERTITVKGSIEACCLAEQEIMKKVR-EA 353
Query: 465 LKDRDGSRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLY 524
+ + N L+P + LG IG+ SS
Sbjct: 354 YDNDIAAMN---------------QQTHLIPGL----NLG---------AIGLFPPSSAM 385
Query: 525 GYGSL--SMGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKI 582
+L S+ PYG M + + T+ V +PA AVG +IGK G ++ + +
Sbjct: 386 PPPALGNSVPGPPYGPMGASEQE---------TVHVYIPAQAVGALIGKKGQHIKQLSRF 436
Query: 583 SGATIEMSDSKSSRGD-RVALISGTPEQKRAAENLI 617
+GA+I+++ +++ R+ +++G PE + A+ I
Sbjct: 437 AGASIKIAPAEAPDSKMRMVIVTGPPEAQFKAQGRI 472
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 95/430 (22%), Positives = 179/430 (41%), Gaps = 82/430 (19%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKEDVEV 98
R+L P +G++IGK G I +I ++T++++ V GA ++ ++I+S
Sbjct: 202 RLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKPISIHS---------- 251
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
E AA +L++ N D K ++ ++L ++ +IGK
Sbjct: 252 -----TPEGCSAACRMILEI--------MNQEAKDTKTADEVPLKVLAHNNFVGRLIGKE 298
Query: 159 GATIKRLRSKTRTSIKVTP-KDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYK 217
G +K++ T T I ++P +D + + + + G EA A IM K
Sbjct: 299 GRNLKKVEQDTDTKITISPLQDLT------LYNPERTITVKGSIEA---CCLAEQEIMKK 349
Query: 218 FSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQ 277
VREA + I + + ++P ++ +I G
Sbjct: 350 ------------VREAYDNDIAAMNQQTH-----------LIPGLNLGAI-GLFPPSSAM 385
Query: 278 GYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQAS 337
GN+ P G +GAS+ E + V P +G +IGK G IK + + +
Sbjct: 386 PPPALGNSVP------GPPYGPMGASEQE--TVHVYIPAQAVGALIGKKGQHIKQLSRFA 437
Query: 338 GAQIDV--DDTKDNRDECVITVTAIESPDDIKSMA-VEAVLLLQTKINDEDDDTVTIRLL 394
GA I + + D++ VI E+ K+ + L + +++ + +
Sbjct: 438 GASIKIAPAEAPDSKMRMVIVTGPPEA--QFKAQGRIYGKLKEENFFGPKEEVKLETHIK 495
Query: 395 VSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDE-LVEVVGEVGS----- 448
V++ G +IGK G +NE++ T A+V + + P D +D+ +V+++G +
Sbjct: 496 VAAAAAGRVIGKGGKTVNELQNLTAAEVVVPREQTP---DEHDQVIVKIIGHFYASQLAQ 552
Query: 449 --VRDALVQI 456
+RD L Q+
Sbjct: 553 RKIRDILTQV 562
>sp|O00425|IF2B3_HUMAN Insulin-like growth factor 2 mRNA-binding protein 3 OS=Homo sapiens
GN=IGF2BP3 PE=1 SV=2
Length = 579
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 147/322 (45%), Gaps = 39/322 (12%)
Query: 298 GLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITV 357
G V + +L +R+L P +G +IGK G TI++I + + ++IDV K+N ++
Sbjct: 186 GSVSKQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDV-HRKENAGAAEKSI 244
Query: 358 TAIESPDDIKSMAVEAVLLLQTKIND-EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
T + +P+ + + ++ + D + + + +++L + +G +IGK G + +I +
Sbjct: 245 TILSTPEGTSAACKSILEIMHKEAQDIKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQ 304
Query: 417 RTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPV 476
T + IS + + + + V G V + A +I+ ++R+ D S N +
Sbjct: 305 DTDTKITISPLQELTLYNP-ERTITVKGNVETCAKAEEEIMKKIRESYEND-IASMN--L 360
Query: 477 GADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPY 536
A I G ++ L PP GM +S G S PY
Sbjct: 361 QAHLI--PGLNLNA---LGLFPPTS--------------GMPPPTS----GPPSAMTPPY 397
Query: 537 GSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSR 596
++ T+ + +PA +VG +IGK G ++ + + +GA+I+++ +++
Sbjct: 398 PQFEQSETE---------TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPD 448
Query: 597 GD-RVALISGTPEQKRAAENLI 617
R+ +I+G PE + A+ I
Sbjct: 449 AKVRMVIITGPPEAQFKAQGRI 470
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 94/441 (21%), Positives = 176/441 (39%), Gaps = 83/441 (18%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKEDVEV 98
R+L P +G++IGK G I +I ++T++++ V GA ++ +TI S
Sbjct: 199 RLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILS---------- 248
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
E AA ++L++ + D K E+ +IL ++ +IGK
Sbjct: 249 -----TPEGTSAACKSILEI--------MHKEAQDIKFTEEIPLKILAHNNFVGRLIGKE 295
Query: 159 GATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKF 218
G +K++ T T I ++P + + + G E KA IM K
Sbjct: 296 GRNLKKIEQDTDTKITISPLQ-----ELTLYNPERTITVKGNVETCAKAE---EEIMKK- 346
Query: 219 SPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQG 278
+RE+ + I ++ + GL NA + P S
Sbjct: 347 -----------IRESYENDIASMNLQAHLIPGLNLNALGLFPPTS--------------- 380
Query: 279 YADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASG 338
G P ++ QSE + + P +G +IGK G IK + + +G
Sbjct: 381 ----GMPPPTSGPPSAMTPPYPQFEQSETETVHLFIPALSVGAIIGKQGQHIKQLSRFAG 436
Query: 339 AQIDV--DDTKDNRDECVITVTAIESPDDIKSMA---VEAVLLLQTKINDEDDDTVTIRL 393
A I + + D + VI I P + + A + + + ++ +++ + +
Sbjct: 437 ASIKIAPAEAPDAKVRMVI----ITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHI 492
Query: 394 LVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDE-LVEVVGEVGS---- 448
V S G +IGK G +NE++ + A+V + + P D ND+ +V++ G +
Sbjct: 493 RVPSFAAGRVIGKGGKTVNELQNLSSAEVVVPRDQTP---DENDQVVVKITGHFYACQVA 549
Query: 449 ---VRDALVQIILRLRDDALK 466
+++ L Q+ + AL+
Sbjct: 550 QRKIQEILTQVKQHQQQKALQ 570
Score = 37.4 bits (85), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 58/148 (39%), Gaps = 24/148 (16%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDP-FPGAKDRVVTIYSHVKDK 93
E+ + P +G++IGK G+ I + + A +K+ P AK R+V I
Sbjct: 404 ETETVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVII------- 456
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
+A K I + K + K E I VPS +
Sbjct: 457 ---------------TGPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGR 501
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+IGK G T+ L++ + + V P+D +
Sbjct: 502 VIGKGGKTVNELQNLSSAEV-VVPRDQT 528
>sp|Q9NZI8|IF2B1_HUMAN Insulin-like growth factor 2 mRNA-binding protein 1 OS=Homo sapiens
GN=IGF2BP1 PE=1 SV=2
Length = 577
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 147/332 (44%), Gaps = 47/332 (14%)
Query: 292 GLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRD 351
G + +G Q ++ +R+L P +G +IGK G TI++I + + ++IDV K+N
Sbjct: 180 GSPVAAGAPAKQQQVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDV-HRKENAG 238
Query: 352 ECVITVTAIESPDDIKSMAVEAVLLLQTKIND-EDDDTVTIRLLVSSKVIGCIIGKSGSI 410
++ +P+ S + ++ + D + D V +++L + +G +IGK G
Sbjct: 239 AAEKAISVHSTPEGCSSACKMILEIMHKEAKDTKTADEVPLKILAHNNFVGRLIGKEGRN 298
Query: 411 INEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDG 470
+ ++ + T+ + IS + + + V G + + A +I+ ++R+ D
Sbjct: 299 LKKVEQDTETKITISSLQDLTLYNP-ERTITVKGAIENCCRAEQEIMKKVREAYEND--- 354
Query: 471 SRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLS 530
V A + S L+P + + G+ SSS++ S
Sbjct: 355 -----VAAMSLQSH--------LIPGL-----------NLAAVGLFPASSSAVPPPPSSV 390
Query: 531 MGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATI--- 587
G +PY S + P ++V +PA AVG +IGK G ++ + + + A+I
Sbjct: 391 TGAAPYSS--------FMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIA 442
Query: 588 --EMSDSKSSRGDRVALISGTPEQKRAAENLI 617
E DSK R+ +I+G PE + A+ I
Sbjct: 443 PPETPDSKV----RMVIITGPPEAQFKAQGRI 470
Score = 57.4 bits (137), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 96/438 (21%), Positives = 175/438 (39%), Gaps = 97/438 (22%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKEDVEV 98
R+L P +G++IGK G I +I ++T++++ V GA ++ ++++S
Sbjct: 199 RLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHS---------- 248
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
E +A +L+ + + D K ++ +IL ++ +IGK
Sbjct: 249 -----TPEGCSSACKMILE--------IMHKEAKDTKTADEVPLKILAHNNFVGRLIGKE 295
Query: 159 GATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESE-----AVKKALFAISA 213
G +K++ T T I ++ + L + E A++ A
Sbjct: 296 GRNLKKVEQDTETKITIS-------------SLQDLTLYNPERTITVKGAIENCCRAEQE 342
Query: 214 IMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPN--ADPILPSRSVPSILGAA 271
IM K VREA Y N A L S +P L A
Sbjct: 343 IMKK------------VREA------------------YENDVAAMSLQSHLIPG-LNLA 371
Query: 272 RVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIK 331
V + P TG + S + A + E +++V P +G +IGK G IK
Sbjct: 372 AVGLFPASSSAVPPPPSSVTGAAPYSSFMQAPEQE--MVQVFIPAQAVGAIIGKKGQHIK 429
Query: 332 SIRQASGAQIDVD--DTKDNRDECVITVTAIESPDDIKSMA---VEAVLLLQTKINDEDD 386
+ + + A I + +T D++ VI I P + + A + L + +++
Sbjct: 430 QLSRFASASIKIAPPETPDSKVRMVI----ITGPPEAQFKAQGRIYGKLKEENFFGPKEE 485
Query: 387 DTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDE-LVEVVGE 445
+ + V + G +IGK G +NE++ T A+V + + P D ND+ +V+++G
Sbjct: 486 VKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQTP---DENDQVIVKIIGH 542
Query: 446 VGS-------VRDALVQI 456
+ +RD L Q+
Sbjct: 543 FYASQMAQRKIRDILAQV 560
Score = 46.2 bits (108), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 95/248 (38%), Gaps = 67/248 (27%)
Query: 28 KDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKV---VDPFPGAKDRVV 84
KD K +E V +IL + +G +IGK G+ + + Q+T ++ + D +R +
Sbjct: 269 KDTKTADE-VPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYNPERTI 327
Query: 85 TIYSHVKDKEDVEVDDEFNDKEPLC-AAQDALLKVHAAIANAVANATDNDK--------- 134
T+ + E C A Q+ + KV A N VA +
Sbjct: 328 TVKGAI---------------ENCCRAEQEIMKKVREAYENDVAAMSLQSHLIPGLNLAA 372
Query: 135 ----------------------------KRKEKEECQILVPSSQSANIIGKAGATIKRLR 166
+ E+E Q+ +P+ IIGK G IK+L
Sbjct: 373 VGLFPASSSAVPPPPSSVTGAAPYSSFMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLS 432
Query: 167 SKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYK---FSPRED 223
SIK+ P + P M V+I+G EA KA I + + F P+E+
Sbjct: 433 RFASASIKIAPPET--PDSKVRM-----VIITGPPEAQFKAQGRIYGKLKEENFFGPKEE 485
Query: 224 IPLETTVR 231
+ LET +R
Sbjct: 486 VKLETHIR 493
Score = 42.7 bits (99), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 24/148 (16%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDP-FPGAKDRVVTIYSHVKDK 93
E + ++ P +G++IGK G+ I + + A +K+ P P +K R+V I
Sbjct: 404 EQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVII------- 456
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
+A K I + K + K E I VP+S +
Sbjct: 457 ---------------TGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGR 501
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+IGK G T+ L++ T + V P+D +
Sbjct: 502 VIGKGGKTVNELQNLTAAEV-VVPRDQT 528
>sp|O88477|IF2B1_MOUSE Insulin-like growth factor 2 mRNA-binding protein 1 OS=Mus musculus
GN=Igf2bp1 PE=1 SV=1
Length = 577
Score = 67.8 bits (164), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 147/332 (44%), Gaps = 47/332 (14%)
Query: 292 GLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRD 351
G + +G Q ++ +R+L P +G +IGK G TI++I + + ++IDV K+N
Sbjct: 180 GSPVAAGAPAKQQPVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDV-HRKENAG 238
Query: 352 ECVITVTAIESPDDIKSMAVEAVLLLQTKIND-EDDDTVTIRLLVSSKVIGCIIGKSGSI 410
++ +P+ S + ++ + D + D V +++L + +G +IGK G
Sbjct: 239 AAEKAISVHSTPEGCSSACKMILEIMHKEAKDTKTADEVPLKILAHNNFVGRLIGKEGRN 298
Query: 411 INEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDG 470
+ ++ + T+ + IS + + + V G + + A +I+ ++R+ D
Sbjct: 299 LKKVEQDTETKITISSLQDLTLYNP-ERTITVKGAIENCCRAEQEIMKKVREAYEND--- 354
Query: 471 SRNPPVGADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLS 530
V A + S L+P + + G+ SSS++ S
Sbjct: 355 -----VAAMSLQSH--------LIPGL-----------NLAAVGLFPASSSAVPPPPSSV 390
Query: 531 MGDSPYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATI--- 587
G +PY S + P ++V +PA AVG +IGK G ++ + + + A+I
Sbjct: 391 TGAAPYSS--------FMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIA 442
Query: 588 --EMSDSKSSRGDRVALISGTPEQKRAAENLI 617
E DSK R+ +I+G PE + A+ I
Sbjct: 443 PPETPDSKV----RMVVITGPPEAQFKAQGRI 470
Score = 57.0 bits (136), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 95/438 (21%), Positives = 175/438 (39%), Gaps = 97/438 (22%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKEDVEV 98
R+L P +G++IGK G I +I ++T++++ V GA ++ ++++S
Sbjct: 199 RLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHS---------- 248
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
E +A +L++ + D K ++ +IL ++ +IGK
Sbjct: 249 -----TPEGCSSACKMILEI--------MHKEAKDTKTADEVPLKILAHNNFVGRLIGKE 295
Query: 159 GATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESE-----AVKKALFAISA 213
G +K++ T T I ++ + L + E A++ A
Sbjct: 296 GRNLKKVEQDTETKITIS-------------SLQDLTLYNPERTITVKGAIENCCRAEQE 342
Query: 214 IMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPN--ADPILPSRSVPSILGAA 271
IM K VREA Y N A L S +P L A
Sbjct: 343 IMKK------------VREA------------------YENDVAAMSLQSHLIPG-LNLA 371
Query: 272 RVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIK 331
V + P TG + S + A + E +++V P +G +IGK G IK
Sbjct: 372 AVGLFPASSSAVPPPPSSVTGAAPYSSFMQAPEQE--MVQVFIPAQAVGAIIGKKGQHIK 429
Query: 332 SIRQASGAQIDVD--DTKDNRDECVITVTAIESPDDIKSMA---VEAVLLLQTKINDEDD 386
+ + + A I + +T D++ V+ I P + + A + L + +++
Sbjct: 430 QLSRFASASIKIAPPETPDSKVRMVV----ITGPPEAQFKAQGRIYGKLKEENFFGPKEE 485
Query: 387 DTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDE-LVEVVGE 445
+ + V + G +IGK G +NE++ T A+V + + P D ND+ +V+++G
Sbjct: 486 VKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQTP---DENDQVIVKIIGH 542
Query: 446 VGS-------VRDALVQI 456
+ +RD L Q+
Sbjct: 543 FYASQMAQRKIRDILAQV 560
Score = 43.1 bits (100), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 24/148 (16%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDP-FPGAKDRVVTIYSHVKDK 93
E + ++ P +G++IGK G+ I + + A +K+ P P +K R+V I
Sbjct: 404 EQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVVI------- 456
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
+A K I + K + K E I VP+S +
Sbjct: 457 ---------------TGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGR 501
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+IGK G T+ L++ T + V P+D +
Sbjct: 502 VIGKGGKTVNELQNLTAAEV-VVPRDQT 528
>sp|Q9UNW9|NOVA2_HUMAN RNA-binding protein Nova-2 OS=Homo sapiens GN=NOVA2 PE=1 SV=1
Length = 492
Score = 67.0 bits (162), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 86/175 (49%), Gaps = 21/175 (12%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD-----NRDECVITVTAIE 361
E ++VL P G +IGKGG TI +++ +GA I + +KD C++ TA E
Sbjct: 32 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTA-E 90
Query: 362 SPDDIKSMAVEAVL-------------LLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSG 408
+ + + S E V +LQ + D +L+V + G IIGK G
Sbjct: 91 ALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGG 150
Query: 409 SIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDD 463
+ + + +++ A V++S+ KP+ + + +V V GE V A+ I+ ++++D
Sbjct: 151 ATVKAVMEQSGAWVQLSQ--KPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQED 203
Score = 57.4 bits (137), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 90/189 (47%), Gaps = 17/189 (8%)
Query: 26 NEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV---DPFPGAKDR 82
++ G E ++L P GS+IGK G+ I +++ET A +K+ D +PG +R
Sbjct: 22 TKRSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTER 81
Query: 83 VVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEEC 142
V + E + F E + A+ K + N + T + R ++
Sbjct: 82 VCLVQG---TAEALNAVHSF-IAEKVREIPQAMTKPE--VVNILQPQTTMNPDR--AKQA 133
Query: 143 QILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESE 202
+++VP+S + IIGK GAT+K + ++ ++++ K ++ + V +SGE E
Sbjct: 134 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKP-----EGINLQ-ERVVTVSGEPE 187
Query: 203 AVKKALFAI 211
V KA+ AI
Sbjct: 188 QVHKAVSAI 196
Score = 49.7 bits (117), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 42/69 (60%), Gaps = 7/69 (10%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSK---SSRGDRVALISGTPEQKRA 612
L+VL+P+ A G +IGK G + ++K +GATI++S SK +RV L+ GT E
Sbjct: 35 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAE---- 90
Query: 613 AENLIQAFI 621
A N + +FI
Sbjct: 91 ALNAVHSFI 99
Score = 42.0 bits (97), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 5/66 (7%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDS----KSSRGDRVALISGTPEQKR 611
+E+ VP N VG ++GK G L ++++GA I++S +R RV I+G+P +
Sbjct: 409 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVT-ITGSPAATQ 467
Query: 612 AAENLI 617
AA+ LI
Sbjct: 468 AAQYLI 473
Score = 35.8 bits (81), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
Query: 38 IYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV---DPFPGAKDRVVTI 86
+ I P+ ++G+++GK GK + ++ T AR+++ + PG ++R VTI
Sbjct: 408 LVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTI 459
Score = 35.8 bits (81), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 557 EVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS--SRGDRVALISGTPEQ-KRAA 613
+++VP + G +IGK G+ + + + SGA +++S + +RV +SG PEQ +A
Sbjct: 134 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAV 193
Query: 614 ENLIQ 618
++Q
Sbjct: 194 SAIVQ 198
Score = 35.0 bits (79), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 27/45 (60%)
Query: 382 NDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISK 426
N ++ +++L+ S G IIGK G I +++K T A +++SK
Sbjct: 26 NTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSK 70
Score = 33.1 bits (74), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 28/43 (65%)
Query: 302 ASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVD 344
A++S + ++ + P N +G ++GKGG T+ ++ +GA+I +
Sbjct: 401 AAESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQIS 443
>sp|O73932|IF23A_XENLA Insulin-like growth factor 2 mRNA-binding protein 3-A OS=Xenopus
laevis GN=igf2bp3-a PE=1 SV=1
Length = 594
Score = 66.6 bits (161), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 69/313 (22%), Positives = 142/313 (45%), Gaps = 36/313 (11%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDI 366
E+ +R+L P +G +IGK G TI++I + + ++ID+ K+N +T +P+
Sbjct: 205 EVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHR-KENAGAAEKPITIHSTPEGC 263
Query: 367 KSMAVEAVLLLQTKINDED-DDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRIS 425
+ + ++Q + D + + +++L + +G +IGK G + +I + T + IS
Sbjct: 264 SAACKIIMEIMQKEAQDTKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITIS 323
Query: 426 KGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSG 485
+ + + V G + A +I+ ++R+ D + A ++ +
Sbjct: 324 PLQDLTLYNP-ERTITVKGSIEPCAKAEEEIMKKIRESYEND--------IAAMNLQAH- 373
Query: 486 TGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSK 545
L+P + + + +G+ SSS S SS S
Sbjct: 374 -------LIPGL-------------NLNALGLFPSSSSGMPPPSVGVPS---PTSSTSYP 410
Query: 546 LYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGD-RVALIS 604
+G P T+ + +PA AVG +IGK G ++ + + +GA+I+++ ++ R+ +I+
Sbjct: 411 PFGQQPESETVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKLRMVIIT 470
Query: 605 GTPEQKRAAENLI 617
G PE + A+ I
Sbjct: 471 GPPEAQFKAQGRI 483
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 65/143 (45%), Gaps = 12/143 (8%)
Query: 303 SQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTK--DNRDECVITVTAI 360
Q E + + P +G +IGK G IK + + +GA I + + D + VI I
Sbjct: 414 QQPESETVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKLRMVI----I 469
Query: 361 ESPDDIKSMA---VEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKR 417
P + + A + L + +++ + + V S G +IGK G +NE++
Sbjct: 470 TGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIKVPSYAAGRVIGKGGKTVNELQNL 529
Query: 418 TKADVRISKGDKPKCADANDELV 440
T A+V + + P D NDE+V
Sbjct: 530 TSAEVVVPRDQTP---DENDEVV 549
Score = 43.9 bits (102), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 85/212 (40%), Gaps = 54/212 (25%)
Query: 305 SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD---NRDECVITVTAIE 361
+EE+ +++L N +GR+IGK G +K I Q + +I + +D E ITV
Sbjct: 284 TEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQDLTLYNPERTITVKGSI 343
Query: 362 SP-----------------DDIKSMAVEAVLLLQTKIN---------------------- 382
P +DI +M ++A L+ +N
Sbjct: 344 EPCAKAEEEIMKKIRESYENDIAAMNLQAHLIPGLNLNALGLFPSSSSGMPPPSVGVPSP 403
Query: 383 ---------DEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCA 433
+ ++ T+ L + + +G IIGK G I ++ + A ++I+ + P
Sbjct: 404 TSSTSYPPFGQQPESETVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPAEGP--- 460
Query: 434 DANDELVEVVGEVGSVRDALVQIILRLRDDAL 465
DA +V + G + A +I +L+++
Sbjct: 461 DAKLRMVIITGPPEAQFKAQGRIYGKLKEENF 492
Score = 40.8 bits (94), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 48/100 (48%), Gaps = 10/100 (10%)
Query: 135 KRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNF 194
++ E E + +P+ IIGK G IK+L SIK+ P A P M
Sbjct: 414 QQPESETVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAP--AEGPDAKLRM----- 466
Query: 195 VLISGESEAVKKALFAISAIMYK---FSPREDIPLETTVR 231
V+I+G EA KA I + + F P+E++ LET ++
Sbjct: 467 VIITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIK 506
Score = 40.4 bits (93), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Query: 299 LVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDV--DDTKDNRDECVIT 356
G + +L + P GRVIGKGG T+ ++ + A++ V D T D DE V+
Sbjct: 492 FFGPKEEVKLETHIKVPSYAAGRVIGKGGKTVNELQNLTSAEVVVPRDQTPDENDEVVVK 551
Query: 357 VTAIESPDDIKSMAVEAVL 375
+T + ++ +L
Sbjct: 552 ITGHFYASQLAQRKIQEIL 570
Score = 40.0 bits (92), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 58/148 (39%), Gaps = 24/148 (16%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPF-PGAKDRVVTIYSHVKDK 93
ES + P +G++IGK G+ I + + A +K+ P AK R+V I
Sbjct: 417 ESETVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKLRMVII------- 469
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
+A K I + K + K E I VPS +
Sbjct: 470 ---------------TGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIKVPSYAAGR 514
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+IGK G T+ L++ T + V P+D +
Sbjct: 515 VIGKGGKTVNELQNLTSAEV-VVPRDQT 541
Score = 34.7 bits (78), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 551 PPPLT---LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSS-RGDRVALISGT 606
P P T L +LVP VG +IGK G+ + NI K + + I++ +++ ++ I T
Sbjct: 200 PKPQTEVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAEKPITIHST 259
Query: 607 PEQKRAAENLI 617
PE AA +I
Sbjct: 260 PEGCSAACKII 270
>sp|Q9CPN8|IF2B3_MOUSE Insulin-like growth factor 2 mRNA-binding protein 3 OS=Mus musculus
GN=Igf2bp3 PE=1 SV=1
Length = 579
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/325 (19%), Positives = 148/325 (45%), Gaps = 45/325 (13%)
Query: 298 GLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITV 357
G V + +L +R+L P +G +IGK G TI++I + + ++IDV K+N ++
Sbjct: 186 GSVSKQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVH-RKENTGAAEKSI 244
Query: 358 TAIESPDDIKSMAVEAVLLLQTKIND-EDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRK 416
T + +P+ + + ++ + D + + + +++L + +G +IGK G + +I +
Sbjct: 245 TILSTPEGTSAACKSILEIMHKEAQDIKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQ 304
Query: 417 RTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPV 476
T + IS + + + + V G V + A +I+ ++R+ D +
Sbjct: 305 DTDTKITISPLQELTLYNP-ERTITVKGSVETCAKAEEEIMKKIRESYEND--------I 355
Query: 477 GADHIYSSGTGISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDS-- 534
+ ++ + L+P + + + +G+ +S + +
Sbjct: 356 ASMNLQAH--------LIPGL-------------NLNALGLFPPTSGMPPPTSGPPSTLT 394
Query: 535 -PYGSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSK 593
PY ++ T+ + +PA +VG +IGK G ++ + + +GA+I+++ ++
Sbjct: 395 PPYPQFEQSETE---------TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAE 445
Query: 594 SSRGD-RVALISGTPEQKRAAENLI 617
+ R+ +I+G PE + A+ I
Sbjct: 446 APDAKVRMVIITGPPEAQFKAQGRI 470
Score = 57.0 bits (136), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 94/441 (21%), Positives = 177/441 (40%), Gaps = 83/441 (18%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKEDVEV 98
R+L P +G++IGK G I +I ++T++++ V GA ++ +TI S
Sbjct: 199 RLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENTGAAEKSITILS---------- 248
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
E AA ++L++ + D K E+ +IL ++ +IGK
Sbjct: 249 -----TPEGTSAACKSILEI--------MHKEAQDIKFTEEIPLKILAHNNFVGRLIGKE 295
Query: 159 GATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKALFAISAIMYKF 218
G +K++ T T I ++P + + + G E KA IM K
Sbjct: 296 GRNLKKIEQDTDTKITISPLQ-----ELTLYNPERTITVKGSVETCAKAE---EEIMKK- 346
Query: 219 SPREDIPLETTVREAPPSIIIPSDVPIYPPGGLYPNADPILPSRSVPSILGAARVPDLQG 278
+RE+ + I ++ + GL NA + P S + L
Sbjct: 347 -----------IRESYENDIASMNLQAHLIPGLNLNALGLFPPTSGMPPPTSGPPSTL-- 393
Query: 279 YADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASG 338
+P + QSE + + P +G +IGK G IK + + +G
Sbjct: 394 ----TPPYPQFE-------------QSETETVHLFIPALSVGAIIGKQGQHIKQLSRFAG 436
Query: 339 AQIDV--DDTKDNRDECVITVTAIESPDDIKSMA---VEAVLLLQTKINDEDDDTVTIRL 393
A I + + D + VI I P + + A + + + ++ +++ + +
Sbjct: 437 ASIKIAPAEAPDAKVRMVI----ITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHI 492
Query: 394 LVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDE-LVEVVGEVGS---- 448
V S G +IGK G +NE++ + A+V + + P D ND+ +V++ G +
Sbjct: 493 RVPSFAAGRVIGKGGKTVNELQSLSSAEVVVPRDQTP---DENDQVVVKITGHFYACQVA 549
Query: 449 ---VRDALVQIILRLRDDALK 466
+++ L Q+ + AL+
Sbjct: 550 QRKIQEILTQVKQHQQQKALQ 570
Score = 38.5 bits (88), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 58/148 (39%), Gaps = 24/148 (16%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDP-FPGAKDRVVTIYSHVKDK 93
E+ + P +G++IGK G+ I + + A +K+ P AK R+V I
Sbjct: 404 ETETVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVII------- 456
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
+A K I + K + K E I VPS +
Sbjct: 457 ---------------TGPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGR 501
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+IGK G T+ L+S + + V P+D +
Sbjct: 502 VIGKGGKTVNELQSLSSAEV-VVPRDQT 528
>sp|Q2PFW9|NOVA1_MACFA RNA-binding protein Nova-1 OS=Macaca fascicularis GN=NOVA1 PE=2
SV=1
Length = 483
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 88/174 (50%), Gaps = 19/174 (10%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD-----NRDECVI--TVTA 359
+ ++VL P G +IGKGG TI +++ +GA I + +KD C+I TV A
Sbjct: 49 QYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEA 108
Query: 360 IES-----PDDIKSM-----AVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGS 409
+ + + I+ M E V +LQ + D ++++V + G IIGK G+
Sbjct: 109 LNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQVKIIVPNSTAGLIIGKGGA 168
Query: 410 IINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDD 463
+ I +++ A V++S+ KP + + +V V GE R A+ II ++++D
Sbjct: 169 TVKAIMEQSGAWVQLSQ--KPDGINLQERVVTVSGEPEQNRKAVELIIQKIQED 220
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 85/199 (42%), Gaps = 45/199 (22%)
Query: 27 EKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV---DPFPGAKDRV 83
++ G + ++L P GS+IGK G+ I +++ET A +K+ D +PG +RV
Sbjct: 40 KRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERV 99
Query: 84 VTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRK------ 137
I V +AL VH IA + N K +
Sbjct: 100 CLIQGTV----------------------EALNAVHGFIAEKIREMPQNVAKTEPVSILQ 137
Query: 138 --------EKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAM 189
++ +I+VP+S + IIGK GAT+K + ++ ++++ K P
Sbjct: 138 PQTTVNPDRIKQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQK----PDGINLQ 193
Query: 190 EFDNFVLISGESEAVKKAL 208
E V +SGE E +KA+
Sbjct: 194 E--RVVTVSGEPEQNRKAV 210
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 41/69 (59%), Gaps = 7/69 (10%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS---SRGDRVALISGTPEQKRA 612
L+VL+P+ A G +IGK G + ++K +GATI++S SK +RV LI GT E
Sbjct: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVE---- 107
Query: 613 AENLIQAFI 621
A N + FI
Sbjct: 108 ALNAVHGFI 116
Score = 42.0 bits (97), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS---SRGDRVALISGTPEQKRA 612
+E+ VP N VG ++GK G L ++++GA I++S +R I+GTP +A
Sbjct: 400 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAATQA 459
Query: 613 AENLI 617
A+ LI
Sbjct: 460 AQYLI 464
Score = 41.6 bits (96), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS--SRGDRVALISGTPEQKRAA 613
++++VP + G +IGK G+ + I + SGA +++S + +RV +SG PEQ R A
Sbjct: 150 VKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGINLQERVVTVSGEPEQNRKA 209
Query: 614 ENLI 617
LI
Sbjct: 210 VELI 213
Score = 37.0 bits (84), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%)
Query: 380 KINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISK 426
+ N +D +++L+ S G IIGK G I +++K T A +++SK
Sbjct: 41 RTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSK 87
Score = 36.2 bits (82), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 38/63 (60%), Gaps = 5/63 (7%)
Query: 27 EKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV---DPFPGAKDRV 83
EK G+++ V I P+ ++G+++GK GK + ++ T AR+++ + PG ++R
Sbjct: 390 EKSTDGSKDVV--EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRK 447
Query: 84 VTI 86
VTI
Sbjct: 448 VTI 450
>sp|Q80WA4|NOVA1_RAT RNA-binding protein Nova-1 (Fragment) OS=Rattus norvegicus GN=Nova1
PE=2 SV=1
Length = 474
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 88/174 (50%), Gaps = 19/174 (10%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD-----NRDECVI--TVTA 359
+ ++VL P G +IGKGG TI +++ +GA I + +KD C+I T+ A
Sbjct: 48 QYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTIEA 107
Query: 360 IES-----PDDIKSM-----AVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGS 409
+ + + I+ M E V +LQ + D ++++V + G IIGK G+
Sbjct: 108 LNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQVKIIVPNSTAGLIIGKGGA 167
Query: 410 IINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDD 463
+ I +++ A V++S+ KP + + +V V GE R A+ II ++++D
Sbjct: 168 TVKAIMEQSGAWVQLSQ--KPDGINLQERVVTVSGEPEQNRKAVELIIQKIQED 219
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 85/199 (42%), Gaps = 45/199 (22%)
Query: 27 EKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV---DPFPGAKDRV 83
++ G + ++L P GS+IGK G+ I +++ET A +K+ D +PG +RV
Sbjct: 39 KRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERV 98
Query: 84 VTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRK------ 137
I + +AL VH IA + N K +
Sbjct: 99 CLIQGTI----------------------EALNAVHGFIAEKIREMPQNVAKTEPVSILQ 136
Query: 138 --------EKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAM 189
++ +I+VP+S + IIGK GAT+K + ++ ++++ K P
Sbjct: 137 PQTTVNPDRIKQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQK----PDGINLQ 192
Query: 190 EFDNFVLISGESEAVKKAL 208
E V +SGE E +KA+
Sbjct: 193 E--RVVTVSGEPEQNRKAV 209
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 41/69 (59%), Gaps = 7/69 (10%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS---SRGDRVALISGTPEQKRA 612
L+VL+P+ A G +IGK G + ++K +GATI++S SK +RV LI GT E
Sbjct: 51 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTIE---- 106
Query: 613 AENLIQAFI 621
A N + FI
Sbjct: 107 ALNAVHGFI 115
Score = 42.4 bits (98), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS---SRGDRVALISGTPEQKRA 612
+E+ VP N VG ++GK G L ++++GA I++S +R I+GTP +A
Sbjct: 399 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAATQA 458
Query: 613 AENLI 617
A+ LI
Sbjct: 459 AQYLI 463
Score = 42.0 bits (97), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS--SRGDRVALISGTPEQKRAA 613
++++VP + G +IGK G+ + I + SGA +++S + +RV +SG PEQ R A
Sbjct: 149 VKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGINLQERVVTVSGEPEQNRKA 208
Query: 614 ENLI 617
LI
Sbjct: 209 VELI 212
Score = 36.6 bits (83), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%)
Query: 380 KINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISK 426
+ N +D +++L+ S G IIGK G I +++K T A +++SK
Sbjct: 40 RTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSK 86
Score = 36.2 bits (82), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 38/63 (60%), Gaps = 5/63 (7%)
Query: 27 EKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV---DPFPGAKDRV 83
EK G+++ V I P+ ++G+++GK GK + ++ T AR+++ + PG ++R
Sbjct: 389 EKSTDGSKDVV--EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRK 446
Query: 84 VTI 86
VTI
Sbjct: 447 VTI 449
>sp|Q5ZLP8|IF2B3_CHICK Insulin-like growth factor 2 mRNA-binding protein 3 OS=Gallus
gallus GN=IGF2BP3 PE=2 SV=1
Length = 584
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/311 (21%), Positives = 142/311 (45%), Gaps = 38/311 (12%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSM 369
+R+L P +G +IGK G TI++I + + ++ID+ K+N +T +P+ +
Sbjct: 199 LRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIH-RKENAGAAEKPITIHSTPEGCSTA 257
Query: 370 AVEAVLLLQTKINDED-DDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGD 428
+ ++Q + D + + +++L + +G +IGK G + +I + T D +I+
Sbjct: 258 CKIIMEIMQKEAQDTKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDT--DTKITISP 315
Query: 429 KPKCADANDE-LVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGADHIYSSGTG 487
N E + V G + + A +I+ ++R+ D + A ++ +
Sbjct: 316 LQDLTLYNPERTITVKGSIETCAKAEEEIMKKIRESYEND--------IAAMNLQAH--- 364
Query: 488 ISMPPLLPSIPPVGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLY 547
L+P + + + +G+ SS S + ++ S +
Sbjct: 365 -----LIPGL-------------NLNALGLFPPSSSGIPPPAVSVAS---AAAAASYPPF 403
Query: 548 GGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGD-RVALISGT 606
G P T+ + +PA AVG +IGK G ++ + + +GA+I+++ ++ R+ +I+G
Sbjct: 404 GQQPESETVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKLRMVIITGP 463
Query: 607 PEQKRAAENLI 617
PE + A+ I
Sbjct: 464 PEAQFKAQGRI 474
Score = 43.5 bits (101), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/191 (20%), Positives = 78/191 (40%), Gaps = 54/191 (28%)
Query: 305 SEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD----NRDECVITVTAI 360
+EE+ +++L N +GR+IGK G +K I Q + +I + +D N + + +I
Sbjct: 275 TEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQDLTLYNPERTITVKGSI 334
Query: 361 ES----------------PDDIKSMAVEAVLLLQTKIN---------------------- 382
E+ +DI +M ++A L+ +N
Sbjct: 335 ETCAKAEEEIMKKIRESYENDIAAMNLQAHLIPGLNLNALGLFPPSSSGIPPPAVSVASA 394
Query: 383 ---------DEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCA 433
+ ++ T+ L + + +G IIGK G I ++ + A ++I+ + P
Sbjct: 395 AAAASYPPFGQQPESETVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPAEGP--- 451
Query: 434 DANDELVEVVG 444
DA +V + G
Sbjct: 452 DAKLRMVIITG 462
Score = 42.7 bits (99), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 65/143 (45%), Gaps = 12/143 (8%)
Query: 303 SQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTK--DNRDECVITVTAI 360
Q E + + P +G +IGK G IK + + +GA I + + D + VI I
Sbjct: 405 QQPESETVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKLRMVI----I 460
Query: 361 ESPDDIKSMA---VEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKR 417
P + + A + L + +++ + + V S G +IGK G +NE++
Sbjct: 461 TGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLEAHIKVPSYAAGRVIGKGGKTVNELQNL 520
Query: 418 TKADVRISKGDKPKCADANDELV 440
T A+V + + P D ND++V
Sbjct: 521 TSAEVVVPRDQTP---DENDQVV 540
Score = 40.0 bits (92), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 61/139 (43%), Gaps = 24/139 (17%)
Query: 40 RILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRVVTIYSHVKDKEDVEV 98
R+L P +G++IGK G I +I ++T++++ + GA ++ +TI+S +
Sbjct: 200 RMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAEKPITIHSTPEG------ 253
Query: 99 DDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKA 158
C+ I + D K E+ +IL ++ +IGK
Sbjct: 254 ----------CSTA-------CKIIMEIMQKEAQDTKFTEEIPLKILAHNNFVGRLIGKE 296
Query: 159 GATIKRLRSKTRTSIKVTP 177
G +K++ T T I ++P
Sbjct: 297 GRNLKKIEQDTDTKITISP 315
Score = 40.0 bits (92), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 58/148 (39%), Gaps = 24/148 (16%)
Query: 35 ESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPF-PGAKDRVVTIYSHVKDK 93
ES + P +G++IGK G+ I + + A +K+ P AK R+V I
Sbjct: 408 ESETVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKLRMVII------- 460
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSAN 153
+A K I + K + K E I VPS +
Sbjct: 461 ---------------TGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLEAHIKVPSYAAGR 505
Query: 154 IIGKAGATIKRLRSKTRTSIKVTPKDAS 181
+IGK G T+ L++ T + V P+D +
Sbjct: 506 VIGKGGKTVNELQNLTSAEV-VVPRDQT 532
Score = 39.3 bits (90), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 47/100 (47%), Gaps = 10/100 (10%)
Query: 135 KRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNF 194
++ E E + +P+ IIGK G IK+L SIK+ P A P M
Sbjct: 405 QQPESETVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAP--AEGPDAKLRM----- 457
Query: 195 VLISGESEAVKKALFAISAIMYK---FSPREDIPLETTVR 231
V+I+G EA KA I + + F P+E++ LE ++
Sbjct: 458 VIITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLEAHIK 497
Score = 37.7 bits (86), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 299 LVGASQSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDV--DDTKDNRDECVIT 356
G + +L + P GRVIGKGG T+ ++ + A++ V D T D D+ V+
Sbjct: 483 FFGPKEEVKLEAHIKVPSYAAGRVIGKGGKTVNELQNLTSAEVVVPRDQTPDENDQVVVK 542
Query: 357 VT 358
+T
Sbjct: 543 IT 544
Score = 37.0 bits (84), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 29/46 (63%)
Query: 389 VTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCAD 434
V +R+LV ++ +G IIGK G+ I I K+T++ + I + + A+
Sbjct: 197 VPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAE 242
>sp|Q96I24|FUBP3_HUMAN Far upstream element-binding protein 3 OS=Homo sapiens GN=FUBP3
PE=1 SV=2
Length = 572
Score = 60.1 bits (144), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 140/361 (38%), Gaps = 42/361 (11%)
Query: 296 VSGLVGASQSEELVI--RVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDE- 352
V +GA + VI P +G +IG+GG I I+ SG +I + E
Sbjct: 64 VGNQLGALVHQRTVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPER 123
Query: 353 -CVITVT--AIESPDDIKSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGS 409
CV+T T +IE + V+ ND D ++ +L+ + +G +IG+ G
Sbjct: 124 PCVLTGTPESIEQAKRLLGQIVDRCRNGPGFHNDIDSNSTIQEILIPASKVGLVIGRGGE 183
Query: 410 IINEIRKRTKAD-VRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDR 468
I ++++RT V I G P AD + +V R+ +++II +
Sbjct: 184 TIKQLQERTGVKMVMIQDGPLPTGADKPLRITGDAFKVQQAREMVLEIIREKDQADFRGV 243
Query: 469 DGSRNPPVGADHIYSS------------------------GTGISMPP---LLP--SIPP 499
G N +G I S G I P + P +
Sbjct: 244 RGDFNSRMGGGSIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPERAAQV 303
Query: 500 VGPLGYDQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLYGGLPPPLTLEVL 559
+GP Q A +L++ G+G L+ +S GG+ +
Sbjct: 304 MGPPDRCQHAAHIISELILTAQERDGFGGLAAARGRGRGRGDWSVGAPGGV---QEITYT 360
Query: 560 VPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGD---RVALISGTPEQKRAAENL 616
VPA+ G VIGK G N+ +I + SGA +E+ + D R I G P+Q A L
Sbjct: 361 VPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNSDPNLRRFTIRGVPQQIEVARQL 420
Query: 617 I 617
I
Sbjct: 421 I 421
Score = 40.8 bits (94), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 76/164 (46%), Gaps = 24/164 (14%)
Query: 44 PDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFN 103
PD ++G +IG+ G+ I+ I+ E+ ++++ G +R + E +E
Sbjct: 85 PDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVL---TGTPESIE------ 135
Query: 104 DKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIK 163
A+ L ++ N D D +E IL+P+S+ +IG+ G TIK
Sbjct: 136 ------QAKRLLGQIVDRCRNGPGFHNDIDSNSTIQE---ILIPASKVGLVIGRGGETIK 186
Query: 164 RLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKA 207
+L+ +T + V +D PT + D + I+G++ V++A
Sbjct: 187 QLQERTGVKM-VMIQDGPLPTGA-----DKPLRITGDAFKVQQA 224
Score = 40.0 bits (92), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 537 GSMSSYSSKLYGGLPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSR 596
G ++S++ GG ++EV VP AVG VIG+ G + I+ +G I+
Sbjct: 242 GVRGDFNSRMGGG-----SIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGIS 296
Query: 597 GDRVALISGTPEQKRAAENLIQAFIM 622
+R A + G P++ + A ++I I+
Sbjct: 297 PERAAQVMGPPDRCQHAAHIISELIL 322
Score = 35.8 bits (81), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 64/157 (40%), Gaps = 18/157 (11%)
Query: 36 SVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVD--PFPGAKDRVVTIYSHVKDK 93
S I IL P +G VIG+ G+ I +++ T ++ ++ P P D+ + I
Sbjct: 162 STIQEILIPASKVGLVIGRGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRI------- 214
Query: 94 EDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDND-KKRKEKEECQILVPSSQSA 152
D F ++ A++ +L++ A D R ++ VP
Sbjct: 215 ----TGDAFKVQQ----AREMVLEIIREKDQADFRGVRGDFNSRMGGGSIEVSVPRFAVG 266
Query: 153 NIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAM 189
+IG+ G IK++++ I+ P D P + +
Sbjct: 267 IVIGRNGEMIKKIQNDAGVRIQFKPDDGISPERAAQV 303
>sp|Q9JKN6|NOVA1_MOUSE RNA-binding protein Nova-1 OS=Mus musculus GN=Nova1 PE=1 SV=2
Length = 507
Score = 57.4 bits (137), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 90/198 (45%), Gaps = 43/198 (21%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKD-----NRDECVI--TVTA 359
+ ++VL P G +IGKGG TI +++ +GA I + +KD C+I T+ A
Sbjct: 49 QYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTIEA 108
Query: 360 I------------ESPDDIKSMAVEAVLLLQTKIN----------------DEDDDTVT- 390
+ E P ++ ++L QT +N D +T
Sbjct: 109 LNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTT 168
Query: 391 -----IRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGE 445
++++V + G IIGK G+ + I +++ A V++S+ KP + + +V V GE
Sbjct: 169 SRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQ--KPDGINLQERVVTVSGE 226
Query: 446 VGSVRDALVQIILRLRDD 463
R A+ II ++++D
Sbjct: 227 PEQNRKAVELIIQKIQED 244
Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 88/201 (43%), Gaps = 25/201 (12%)
Query: 27 EKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV---DPFPGAKDRV 83
++ G + ++L P GS+IGK G+ I +++ET A +K+ D +PG +RV
Sbjct: 40 KRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERV 99
Query: 84 VTIYSHVKDKEDV---------EVDDEFNDKEPLCAAQ-------DALLKVHAAIANAVA 127
I ++ V E+ EP+ Q D + + +
Sbjct: 100 CLIQGTIEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTK 159
Query: 128 NATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSC 187
++ + + +I+VP+S + IIGK GAT+K + ++ ++++ K P
Sbjct: 160 SSPSDPMTTSRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQK----PDGIN 215
Query: 188 AMEFDNFVLISGESEAVKKAL 208
E V +SGE E +KA+
Sbjct: 216 LQE--RVVTVSGEPEQNRKAV 234
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 41/69 (59%), Gaps = 7/69 (10%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS---SRGDRVALISGTPEQKRA 612
L+VL+P+ A G +IGK G + ++K +GATI++S SK +RV LI GT E
Sbjct: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTIE---- 107
Query: 613 AENLIQAFI 621
A N + FI
Sbjct: 108 ALNAVHGFI 116
Score = 42.0 bits (97), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS---SRGDRVALISGTPEQKRA 612
+E+ VP N VG ++GK G L ++++GA I++S +R I+GTP +A
Sbjct: 424 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAATQA 483
Query: 613 AENLI 617
A+ LI
Sbjct: 484 AQYLI 488
Score = 41.6 bits (96), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS--SRGDRVALISGTPEQKRAA 613
++++VP + G +IGK G+ + I + SGA +++S + +RV +SG PEQ R A
Sbjct: 174 VKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGINLQERVVTVSGEPEQNRKA 233
Query: 614 ENLI 617
LI
Sbjct: 234 VELI 237
Score = 37.0 bits (84), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%)
Query: 380 KINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISK 426
+ N +D +++L+ S G IIGK G I +++K T A +++SK
Sbjct: 41 RTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSK 87
Score = 36.2 bits (82), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 38/63 (60%), Gaps = 5/63 (7%)
Query: 27 EKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV---DPFPGAKDRV 83
EK G+++ + I P+ ++G+++GK GK + ++ T AR+++ + PG ++R
Sbjct: 414 EKSTDGSKD--VVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRK 471
Query: 84 VTI 86
VTI
Sbjct: 472 VTI 474
>sp|Q21920|ANKHM_CAEEL Ankyrin repeat and KH domain-containing protein R11A8.7
OS=Caenorhabditis elegans GN=R11A8.7 PE=2 SV=3
Length = 2620
Score = 57.0 bits (136), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 68/144 (47%), Gaps = 13/144 (9%)
Query: 491 PPLLPSIPPVGPLGY---DQRADSGSGIGMLSSSSLYGYGSLSMGDSPYGSMSSYSSKLY 547
PP P V P Y ++ +G + SS GYG+ S S SS +S +
Sbjct: 1734 PPAKIHAPMVSPGSYSESEEWCKAGKEGKKVKSSKKSGYGAPSSAGSSQAKESSTTSSVI 1793
Query: 548 GGLPPPL--------TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSS--RG 597
PP + ++ +PA A +VIGK GSN+ +R+ +GA IE++ + S +
Sbjct: 1794 SDQTPPYEIDTRNESSWKLTIPAYAASRVIGKGGSNVNAVREATGAIIEINKIQESNKQA 1853
Query: 598 DRVALISGTPEQKRAAENLIQAFI 621
+R L GTPE R A N+I I
Sbjct: 1854 ERTVLAKGTPEMVRYAMNIINYMI 1877
Score = 38.9 bits (89), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 35/57 (61%)
Query: 311 RVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
++ P RVIGKGG + ++R+A+GA I+++ +++ + TV A +P+ ++
Sbjct: 1811 KLTIPAYAASRVIGKGGSNVNAVREATGAIIEINKIQESNKQAERTVLAKGTPEMVR 1867
>sp|P51513|NOVA1_HUMAN RNA-binding protein Nova-1 OS=Homo sapiens GN=NOVA1 PE=1 SV=1
Length = 510
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 90/201 (44%), Gaps = 46/201 (22%)
Query: 307 ELVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDE--------CVI--T 356
+ ++VL P G +IGKGG TI +++ +GA I + ++D C+I T
Sbjct: 49 QYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKLSKSKDFYPGTTERVCLIQGT 108
Query: 357 VTAI------------ESPDDIKSMAVEAVLLLQTKIN----------------DEDDDT 388
V A+ E P ++ ++L QT +N D
Sbjct: 109 VEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDP 168
Query: 389 VT------IRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEV 442
+T ++++V + G IIGK G+ + + +++ A V++S+ KP + + +V V
Sbjct: 169 MTTSRANQVKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQ--KPDGINLQERVVTV 226
Query: 443 VGEVGSVRDALVQIILRLRDD 463
GE R A+ II ++++D
Sbjct: 227 SGEPEQNRKAVELIIQKIQED 247
Score = 52.8 bits (125), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 88/204 (43%), Gaps = 28/204 (13%)
Query: 27 EKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV------DPFPGAK 80
++ G + ++L P GS+IGK G+ I +++ET A +K+ D +PG
Sbjct: 40 KRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKLSKSKDFYPGTT 99
Query: 81 DRVVTIYSHVKDKEDV---------EVDDEFNDKEPLCAAQ-------DALLKVHAAIAN 124
+RV I V+ V E+ EP+ Q D + + +
Sbjct: 100 ERVCLIQGTVEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPT 159
Query: 125 AVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPT 184
++ + + +I+VP+S + IIGK GAT+K + ++ ++++ K P
Sbjct: 160 TTKSSPSDPMTTSRANQVKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQK----PD 215
Query: 185 HSCAMEFDNFVLISGESEAVKKAL 208
E V +SGE E +KA+
Sbjct: 216 GINLQE--RVVTVSGEPEQNRKAV 237
Score = 46.6 bits (109), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 10/72 (13%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSR------GDRVALISGTPEQ 609
L+VL+P+ A G +IGK G + ++K +GATI++S S+ +RV LI GT E
Sbjct: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKLSKSKDFYPGTTERVCLIQGTVE- 110
Query: 610 KRAAENLIQAFI 621
A N + FI
Sbjct: 111 ---ALNAVHGFI 119
Score = 42.0 bits (97), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS---SRGDRVALISGTPEQKRA 612
+E+ VP N VG ++GK G L ++++GA I++S +R I+GTP +A
Sbjct: 427 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAATQA 486
Query: 613 AENLI 617
A+ LI
Sbjct: 487 AQYLI 491
Score = 41.2 bits (95), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKS--SRGDRVALISGTPEQKRAA 613
++++VP + G +IGK G+ + + + SGA +++S + +RV +SG PEQ R A
Sbjct: 177 VKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPDGINLQERVVTVSGEPEQNRKA 236
Query: 614 ENLI 617
LI
Sbjct: 237 VELI 240
Score = 38.1 bits (87), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 30/52 (57%)
Query: 380 KINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPK 431
+ N +D +++L+ S G IIGK G I +++K T A +++SK K K
Sbjct: 41 RTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKLSKSK 92
Score = 36.6 bits (83), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 38/63 (60%), Gaps = 5/63 (7%)
Query: 27 EKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV---DPFPGAKDRV 83
EK G+++ + I P+ ++G+++GK GK + ++ T AR+++ + PG ++R
Sbjct: 417 EKSTDGSKD--VVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRK 474
Query: 84 VTI 86
VTI
Sbjct: 475 VTI 477
>sp|P38151|PBP2_YEAST PAB1-binding protein 2 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=PBP2 PE=1 SV=1
Length = 413
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 68/138 (49%), Gaps = 8/138 (5%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKS- 368
+R+LC ++G G TI I+ + A+I++ + E ++ V + DD+
Sbjct: 69 LRMLCLVKHASLIVGHKGATISRIKSETSARINISNNIRGVPERIVYVRG--TCDDVAKA 126
Query: 369 --MAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISK 426
M V A+L ++ +D ++I LL+ ++GCIIGK GS + EI + A + S
Sbjct: 127 YGMIVRALLEEHGNEDNGEDIEISINLLIPHHLMGCIIGKRGSRLREIEDLSAAKLFASP 186
Query: 427 GDKPKCADANDELVEVVG 444
+ +ND ++ + G
Sbjct: 187 N---QLLLSNDRILTING 201
Score = 51.2 bits (121), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 77/377 (20%), Positives = 154/377 (40%), Gaps = 63/377 (16%)
Query: 26 NEKDEKGNEESVIY-RILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVV 84
N+ D N S ++ R+LC ++G G I+ I+ ET AR+ + + G +R+V
Sbjct: 55 NDHDSPDNVPSDVHLRMLCLVKHASLIVGHKGATISRIKSETSARINISNNIRGVPERIV 114
Query: 85 TIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKE-ECQ 143
+ C D + K + I A+ N+ ++ E
Sbjct: 115 YVRG-------------------TC---DDVAKAYGMIVRALLEEHGNEDNGEDIEISIN 152
Query: 144 ILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEA 203
+L+P IIGK G+ ++ + + + +P + D + I+G +A
Sbjct: 153 LLIPHHLMGCIIGKRGSRLREIEDLSAAKLFASPNQ-------LLLSNDRILTINGVPDA 205
Query: 204 VKKALFAISAIMYKF---SPREDIPLETTVREAPP---SIIIPSDVP---IYPPGGLYPN 254
+ A F IS + F SP++++ + ++ P S++I P + Y
Sbjct: 206 IHIATFYISQTLLNFQMESPQKNV--KRSIYYQPTQFNSVLIDHSQPNTIFHQRNHQYHP 263
Query: 255 ADPIL---PSRSVP--SILGAARVPDLQ--GYADTGNTWPVYST-GLSLVSG-LVGASQS 305
+D +L P++++P S L + P A+ P + ++++ G ++ +
Sbjct: 264 SDKLLSYKPNKNLPISSTLLSMATPQYTTASVANATAFQPNFVIPNVTVLDGPVISPAPG 323
Query: 306 EELVI-----RVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAI 360
L++ + +G VIGK G I S+++++G I + D + E +T+
Sbjct: 324 NHLLMNFVQQEIFIDEKFVGNVIGKDGKHINSVKESTGCSIIIQDPVEGSSERRLTIRG- 382
Query: 361 ESPDDIKSMAVEAVLLL 377
MA +A ++L
Sbjct: 383 ------TFMASQAAIML 393
Score = 34.7 bits (78), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 554 LTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSK-SSRGDRVALISGTPEQKRA 612
+++ +L+P + +G +IGK GS L I +S A + S ++ DR+ I+G P+
Sbjct: 149 ISINLLIPHHLMGCIIGKRGSRLREIEDLSAAKLFASPNQLLLSNDRILTINGVPDAIHI 208
Query: 613 AENLIQAFIM 622
A I ++
Sbjct: 209 ATFYISQTLL 218
>sp|O75179|ANR17_HUMAN Ankyrin repeat domain-containing protein 17 OS=Homo sapiens
GN=ANKRD17 PE=1 SV=3
Length = 2603
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%)
Query: 557 EVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENL 616
+V VP+ + +VIG+ G N+ IR+ +GA I++ K GDR+ I G E R A L
Sbjct: 1729 KVSVPSTVISRVIGRGGCNINAIREFTGAHIDIDKQKDKTGDRIITIRGGTESTRQATQL 1788
Query: 617 IQAFI 621
I A I
Sbjct: 1789 INALI 1793
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 311 RVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITV 357
+V P I RVIG+GG I +IR+ +GA ID+D KD + +IT+
Sbjct: 1729 KVSVPSTVISRVIGRGGCNINAIREFTGAHIDIDKQKDKTGDRIITI 1775
Score = 33.9 bits (76), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 27 EKDEKGNEESV--IYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVV 84
+K E+G +E V ++ P VI VIG+ G IN+IR+ T A + + DR++
Sbjct: 1714 QKREEGWKEVVRRSKKVSVPSTVISRVIGRGGCNINAIREFTGAHIDIDKQKDKTGDRII 1773
Query: 85 TI 86
TI
Sbjct: 1774 TI 1775
>sp|Q5ZIQ3|HNRPK_CHICK Heterogeneous nuclear ribonucleoprotein K OS=Gallus gallus
GN=HNRNPK PE=2 SV=1
Length = 427
Score = 51.2 bits (121), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 547 YGGLPPPL-TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISG 605
YG L P+ T +V +P + G +IGK G + IR SGA+I++ + DR+ I+G
Sbjct: 344 YGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITG 403
Query: 606 TPEQKRAAENLIQ 618
T +Q + A+ L+Q
Sbjct: 404 TQDQIQNAQYLLQ 416
Score = 50.1 bits (118), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 92/191 (48%), Gaps = 11/191 (5%)
Query: 302 ASQSEELV-IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTA- 359
+ ++E+V +R+L G VIGKGG IK++R A + V D+ E +++++A
Sbjct: 33 SRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSG--PERILSISAD 90
Query: 360 IESPDDIKSMAVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTK 419
E+ +I + + Q + D +RLL+ + G IIG G+ I E+R+ T+
Sbjct: 91 TETIGEILKKIIPTLEEYQHYKGSDFD--CELRLLIHQSLAGGIIGVKGAKIKELRENTQ 148
Query: 420 ADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRLRDDALKDRDGSRNPPVGAD 479
+++ + C + D +V + G+ V + + I+ + + +K R +P D
Sbjct: 149 TTIKLF---QECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPYDPNF-YD 204
Query: 480 HIYSSGTGISM 490
Y G G +M
Sbjct: 205 ETYDYG-GFTM 214
Score = 46.6 bits (109), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 74/181 (40%), Gaps = 32/181 (17%)
Query: 28 KDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIY 87
K + +E V RIL G+VIGK GK I ++R + A V V P +R+++I
Sbjct: 31 KRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSV--PDSSGPERILSIS 88
Query: 88 SHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVP 147
+ D E + ++ + + D E ++L+
Sbjct: 89 A---------------DTETIGEILKKIIPTLEEYQHYKGSDFDC--------ELRLLIH 125
Query: 148 SSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKA 207
S + IIG GA IK LR T+T+IK+ C D VLI G+ + V +
Sbjct: 126 QSLAGGIIGVKGAKIKELRENTQTTIKLF-------QECCPHSTDRVVLIGGKPDRVVEC 178
Query: 208 L 208
+
Sbjct: 179 I 179
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 33/50 (66%)
Query: 37 VIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTI 86
+ ++ P + GS+IGK G+ I IR E+ A +K+ +P G++DR++TI
Sbjct: 352 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITI 401
Score = 42.7 bits (99), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 6/74 (8%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
+ +V P + G +IGKGG IK IR SGA I +D+ + ++ +IT+T + D I+
Sbjct: 352 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQ--DQIQ 409
Query: 368 SMAVEAVLLLQTKI 381
+ A LLQ +
Sbjct: 410 N----AQYLLQNSV 419
Score = 37.7 bits (86), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 10/78 (12%)
Query: 143 QILVPSSQSANIIGKAGATIKRLRSKTRTSIKV-TPKDASEPTHSCAMEFDNFVLISGES 201
Q+ +P + +IIGK G IK++R ++ SIK+ P + SE D + I+G
Sbjct: 355 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSE---------DRIITITGTQ 405
Query: 202 EAVKKALFAISAIMYKFS 219
+ ++ A + + + ++S
Sbjct: 406 DQIQNAQYLLQNSVKQYS 423
>sp|Q99NH0|ANR17_MOUSE Ankyrin repeat domain-containing protein 17 OS=Mus musculus
GN=Ankrd17 PE=1 SV=2
Length = 2603
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%)
Query: 557 EVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENL 616
+V VP+ + +VIG+ G N+ IR+ +GA I++ K GDR+ I G E R A L
Sbjct: 1725 KVSVPSTVISRVIGRGGCNINAIRECTGAHIDIDKQKDKTGDRIITIRGGTESTRQATQL 1784
Query: 617 IQAFI 621
I A I
Sbjct: 1785 INALI 1789
Score = 46.2 bits (108), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 311 RVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITV 357
+V P I RVIG+GG I +IR+ +GA ID+D KD + +IT+
Sbjct: 1725 KVSVPSTVISRVIGRGGCNINAIRECTGAHIDIDKQKDKTGDRIITI 1771
Score = 32.7 bits (73), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 28 KDEKGNEESV--IYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVT 85
K E+G +E V ++ P VI VIG+ G IN+IR+ T A + + DR++T
Sbjct: 1711 KREEGWKEVVRRSKKVSVPSTVISRVIGRGGCNINAIRECTGAHIDIDKQKDKTGDRIIT 1770
Query: 86 I 86
I
Sbjct: 1771 I 1771
>sp|P61980|HNRPK_RAT Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus
GN=Hnrnpk PE=1 SV=1
Length = 463
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 547 YGGLPPPL-TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISG 605
YG L P+ T +V +P + G +IGK G + IR SGA+I++ + DR+ I+G
Sbjct: 380 YGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITG 439
Query: 606 TPEQKRAAENLIQ 618
T +Q + A+ L+Q
Sbjct: 440 TQDQIQNAQYLLQ 452
Score = 50.1 bits (118), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 94/210 (44%), Gaps = 31/210 (14%)
Query: 305 SEELV-IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTA---- 359
++E+V +R+L G VIGKGG IK++R A + V D+ + E +++++A
Sbjct: 39 TDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDS--SGPERILSISADIET 96
Query: 360 -----------------IESPDDIKSMAVE--AVLLLQTKINDEDDDTVTIRLLVSSKVI 400
+ SP + +E AV L + D +RLL+ +
Sbjct: 97 IGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCELRLLIHQSLA 156
Query: 401 GCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRL 460
G IIG G+ I E+R+ T+ +++ + C + D +V + G+ V + + I+ +
Sbjct: 157 GGIIGVKGAKIKELRENTQTTIKLF---QECCPHSTDRVVLIGGKPDRVVECIKIILDLI 213
Query: 461 RDDALKDRDGSRNPPVGADHIYSSGTGISM 490
+ +K R +P D Y G G +M
Sbjct: 214 SESPIKGRAQPYDPNF-YDETYDYG-GFTM 241
Score = 49.7 bits (117), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 84/188 (44%), Gaps = 22/188 (11%)
Query: 28 KDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIY 87
K + +E V RIL G+VIGK GK I ++R + A V V P +R+++I
Sbjct: 34 KRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSV--PDSSGPERILSIS 91
Query: 88 SHVKDKEDV------EVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKE- 140
+ ++ ++ +++ P +Q L ++AV K + +
Sbjct: 92 ADIETIGEILKKIIPTLEEGLQLPSPTATSQLPLE------SDAVECLNYQHYKGSDFDC 145
Query: 141 ECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGE 200
E ++L+ S + IIG GA IK LR T+T+IK+ C D VLI G+
Sbjct: 146 ELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLF-------QECCPHSTDRVVLIGGK 198
Query: 201 SEAVKKAL 208
+ V + +
Sbjct: 199 PDRVVECI 206
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 33/50 (66%)
Query: 37 VIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTI 86
+ ++ P + GS+IGK G+ I IR E+ A +K+ +P G++DR++TI
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITI 437
Score = 43.1 bits (100), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 6/74 (8%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
+ +V P + G +IGKGG IK IR SGA I +D+ + ++ +IT+T + D I+
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQ--DQIQ 445
Query: 368 SMAVEAVLLLQTKI 381
+ A LLQ +
Sbjct: 446 N----AQYLLQNSV 455
Score = 37.7 bits (86), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 10/78 (12%)
Query: 143 QILVPSSQSANIIGKAGATIKRLRSKTRTSIKV-TPKDASEPTHSCAMEFDNFVLISGES 201
Q+ +P + +IIGK G IK++R ++ SIK+ P + SE D + I+G
Sbjct: 391 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSE---------DRIITITGTQ 441
Query: 202 EAVKKALFAISAIMYKFS 219
+ ++ A + + + ++S
Sbjct: 442 DQIQNAQYLLQNSVKQYS 459
Score = 33.5 bits (75), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 25 INEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRV 83
+N + KG++ R+L + G +IG G I +R+ T+ +K+ + P + DRV
Sbjct: 133 LNYQHYKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRV 192
Query: 84 VTI 86
V I
Sbjct: 193 VLI 195
>sp|O19049|HNRPK_RABIT Heterogeneous nuclear ribonucleoprotein K OS=Oryctolagus cuniculus
GN=HNRNPK PE=2 SV=1
Length = 463
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 547 YGGLPPPL-TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISG 605
YG L P+ T +V +P + G +IGK G + IR SGA+I++ + DR+ I+G
Sbjct: 380 YGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITG 439
Query: 606 TPEQKRAAENLIQ 618
T +Q + A+ L+Q
Sbjct: 440 TQDQIQNAQYLLQ 452
Score = 49.7 bits (117), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 81/188 (43%), Gaps = 22/188 (11%)
Query: 28 KDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIY 87
K + +E V RIL G+VIGK GK I ++R + A V V D +R+++I
Sbjct: 34 KRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDS--SGPERILSIS 91
Query: 88 SHVKDKEDV------EVDDEFNDKEPLCAAQDALLKVHAAIANAVA-NATDNDKKRKEKE 140
+ ++ ++ +++ P +Q L N +D D
Sbjct: 92 ADIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHFKGSDFDC------ 145
Query: 141 ECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGE 200
E ++L+ S + IIG GA IK LR T+T+IK+ C D VLI G+
Sbjct: 146 ELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLF-------QECCPHSTDRVVLIGGK 198
Query: 201 SEAVKKAL 208
+ V + +
Sbjct: 199 PDRVVECI 206
Score = 49.7 bits (117), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 94/210 (44%), Gaps = 31/210 (14%)
Query: 305 SEELV-IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTA---- 359
++E+V +R+L G VIGKGG IK++R A + V D+ + E +++++A
Sbjct: 39 TDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDS--SGPERILSISADIET 96
Query: 360 -----------------IESPDDIKSMAVE--AVLLLQTKINDEDDDTVTIRLLVSSKVI 400
+ SP + +E AV L + D +RLL+ +
Sbjct: 97 IGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHFKGSDFDCELRLLIHQSLA 156
Query: 401 GCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRL 460
G IIG G+ I E+R+ T+ +++ + C + D +V + G+ V + + I+ +
Sbjct: 157 GGIIGVKGAKIKELRENTQTTIKLF---QECCPHSTDRVVLIGGKPDRVVECIKIILDLI 213
Query: 461 RDDALKDRDGSRNPPVGADHIYSSGTGISM 490
+ +K R +P D Y G G +M
Sbjct: 214 SESPIKGRAQPYDPNF-YDETYDYG-GFTM 241
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 33/50 (66%)
Query: 37 VIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTI 86
+ ++ P + GS+IGK G+ I IR E+ A +K+ +P G++DR++TI
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITI 437
Score = 43.1 bits (100), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 6/74 (8%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
+ +V P + G +IGKGG IK IR SGA I +D+ + ++ +IT+T + D I+
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQ--DQIQ 445
Query: 368 SMAVEAVLLLQTKI 381
+ A LLQ +
Sbjct: 446 N----AQYLLQNSV 455
Score = 37.7 bits (86), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 10/78 (12%)
Query: 143 QILVPSSQSANIIGKAGATIKRLRSKTRTSIKV-TPKDASEPTHSCAMEFDNFVLISGES 201
Q+ +P + +IIGK G IK++R ++ SIK+ P + SE D + I+G
Sbjct: 391 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSE---------DRIITITGTQ 441
Query: 202 EAVKKALFAISAIMYKFS 219
+ ++ A + + + ++S
Sbjct: 442 DQIQNAQYLLQNSVKQYS 459
Score = 33.1 bits (74), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 25 INEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRV 83
+N + KG++ R+L + G +IG G I +R+ T+ +K+ + P + DRV
Sbjct: 133 LNYQHFKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRV 192
Query: 84 VTI 86
V I
Sbjct: 193 VLI 195
>sp|Q5R5H8|HNRPK_PONAB Heterogeneous nuclear ribonucleoprotein K OS=Pongo abelii GN=HNRNPK
PE=2 SV=1
Length = 464
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 547 YGGLPPPL-TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISG 605
YG L P+ T +V +P + G +IGK G + IR SGA+I++ + DR+ I+G
Sbjct: 380 YGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITG 439
Query: 606 TPEQKRAAENLIQ 618
T +Q + A+ L+Q
Sbjct: 440 TQDQIQNAQYLLQ 452
Score = 49.7 bits (117), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 84/188 (44%), Gaps = 22/188 (11%)
Query: 28 KDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIY 87
K + +E V RIL G+VIGK GK I ++R + A V V P +R+++I
Sbjct: 34 KRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSV--PDSSGPERILSIS 91
Query: 88 SHVKDKEDV------EVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKE- 140
+ ++ ++ +++ P +Q L ++AV K + +
Sbjct: 92 ADIETIGEILKKIIPTLEEGLQLPSPTATSQLPLE------SDAVECLNYQHYKGSDFDC 145
Query: 141 ECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGE 200
E ++L+ S + IIG GA IK LR T+T+IK+ C D VLI G+
Sbjct: 146 ELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLF-------QECCPHSTDRVVLIGGK 198
Query: 201 SEAVKKAL 208
+ V + +
Sbjct: 199 PDRVVECI 206
Score = 49.7 bits (117), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 94/210 (44%), Gaps = 31/210 (14%)
Query: 305 SEELV-IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTA---- 359
++E+V +R+L G VIGKGG IK++R A + V D+ + E +++++A
Sbjct: 39 TDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDS--SGPERILSISADIET 96
Query: 360 -----------------IESPDDIKSMAVE--AVLLLQTKINDEDDDTVTIRLLVSSKVI 400
+ SP + +E AV L + D +RLL+ +
Sbjct: 97 IGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCELRLLIHQSLA 156
Query: 401 GCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRL 460
G IIG G+ I E+R+ T+ +++ + C + D +V + G+ V + + I+ +
Sbjct: 157 GGIIGVKGAKIKELRENTQTTIKLF---QECCPHSTDRVVLIGGKPDRVVECIKIILDLI 213
Query: 461 RDDALKDRDGSRNPPVGADHIYSSGTGISM 490
+ +K R +P D Y G G +M
Sbjct: 214 SESPIKGRAQPYDPNF-YDETYDYG-GFTM 241
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 33/50 (66%)
Query: 37 VIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTI 86
+ ++ P + GS+IGK G+ I IR E+ A +K+ +P G++DR++TI
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITI 437
Score = 43.5 bits (101), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
+ +V P + G +IGKGG IK IR SGA I +D+ + ++ +IT+T + D I+
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQ--DQIQ 445
Query: 368 SMAVEAVLLLQTKINDEDD 386
+ A LLQ + D
Sbjct: 446 N----AQYLLQNSVKQYAD 460
Score = 36.6 bits (83), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 41/78 (52%), Gaps = 10/78 (12%)
Query: 143 QILVPSSQSANIIGKAGATIKRLRSKTRTSIKV-TPKDASEPTHSCAMEFDNFVLISGES 201
Q+ +P + +IIGK G IK++R ++ SIK+ P + SE D + I+G
Sbjct: 391 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSE---------DRIITITGTQ 441
Query: 202 EAVKKALFAISAIMYKFS 219
+ ++ A + + + +++
Sbjct: 442 DQIQNAQYLLQNSVKQYA 459
Score = 33.1 bits (74), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 25 INEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRV 83
+N + KG++ R+L + G +IG G I +R+ T+ +K+ + P + DRV
Sbjct: 133 LNYQHYKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRV 192
Query: 84 VTI 86
V I
Sbjct: 193 VLI 195
>sp|P61979|HNRPK_MOUSE Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus GN=Hnrnpk
PE=1 SV=1
Length = 463
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 547 YGGLPPPL-TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISG 605
YG L P+ T +V +P + G +IGK G + IR SGA+I++ + DR+ I+G
Sbjct: 380 YGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITG 439
Query: 606 TPEQKRAAENLIQ 618
T +Q + A+ L+Q
Sbjct: 440 TQDQIQNAQYLLQ 452
Score = 50.1 bits (118), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 94/210 (44%), Gaps = 31/210 (14%)
Query: 305 SEELV-IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTA---- 359
++E+V +R+L G VIGKGG IK++R A + V D+ + E +++++A
Sbjct: 39 TDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDS--SGPERILSISADIET 96
Query: 360 -----------------IESPDDIKSMAVE--AVLLLQTKINDEDDDTVTIRLLVSSKVI 400
+ SP + +E AV L + D +RLL+ +
Sbjct: 97 IGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCELRLLIHQSLA 156
Query: 401 GCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRL 460
G IIG G+ I E+R+ T+ +++ + C + D +V + G+ V + + I+ +
Sbjct: 157 GGIIGVKGAKIKELRENTQTTIKLF---QECCPHSTDRVVLIGGKPDRVVECIKIILDLI 213
Query: 461 RDDALKDRDGSRNPPVGADHIYSSGTGISM 490
+ +K R +P D Y G G +M
Sbjct: 214 SESPIKGRAQPYDPNF-YDETYDYG-GFTM 241
Score = 49.7 bits (117), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 84/188 (44%), Gaps = 22/188 (11%)
Query: 28 KDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIY 87
K + +E V RIL G+VIGK GK I ++R + A V V P +R+++I
Sbjct: 34 KRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSV--PDSSGPERILSIS 91
Query: 88 SHVKDKEDV------EVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKE- 140
+ ++ ++ +++ P +Q L ++AV K + +
Sbjct: 92 ADIETIGEILKKIIPTLEEGLQLPSPTATSQLPLE------SDAVECLNYQHYKGSDFDC 145
Query: 141 ECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGE 200
E ++L+ S + IIG GA IK LR T+T+IK+ C D VLI G+
Sbjct: 146 ELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLF-------QECCPHSTDRVVLIGGK 198
Query: 201 SEAVKKAL 208
+ V + +
Sbjct: 199 PDRVVECI 206
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 33/50 (66%)
Query: 37 VIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTI 86
+ ++ P + GS+IGK G+ I IR E+ A +K+ +P G++DR++TI
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITI 437
Score = 43.1 bits (100), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 6/74 (8%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
+ +V P + G +IGKGG IK IR SGA I +D+ + ++ +IT+T + D I+
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQ--DQIQ 445
Query: 368 SMAVEAVLLLQTKI 381
+ A LLQ +
Sbjct: 446 N----AQYLLQNSV 455
Score = 37.7 bits (86), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 10/78 (12%)
Query: 143 QILVPSSQSANIIGKAGATIKRLRSKTRTSIKV-TPKDASEPTHSCAMEFDNFVLISGES 201
Q+ +P + +IIGK G IK++R ++ SIK+ P + SE D + I+G
Sbjct: 391 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSE---------DRIITITGTQ 441
Query: 202 EAVKKALFAISAIMYKFS 219
+ ++ A + + + ++S
Sbjct: 442 DQIQNAQYLLQNSVKQYS 459
Score = 33.5 bits (75), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 25 INEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRV 83
+N + KG++ R+L + G +IG G I +R+ T+ +K+ + P + DRV
Sbjct: 133 LNYQHYKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRV 192
Query: 84 VTI 86
V I
Sbjct: 193 VLI 195
>sp|Q4R4M6|HNRPK_MACFA Heterogeneous nuclear ribonucleoprotein K OS=Macaca fascicularis
GN=HNRNPK PE=2 SV=1
Length = 464
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 547 YGGLPPPL-TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISG 605
YG L P+ T +V +P + G +IGK G + IR SGA+I++ + DR+ I+G
Sbjct: 380 YGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITG 439
Query: 606 TPEQKRAAENLIQ 618
T +Q + A+ L+Q
Sbjct: 440 TQDQIQNAQYLLQ 452
Score = 49.7 bits (117), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 84/188 (44%), Gaps = 22/188 (11%)
Query: 28 KDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIY 87
K + +E V RIL G+VIGK GK I ++R + A V V P +R+++I
Sbjct: 34 KRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSV--PDSSGPERILSIS 91
Query: 88 SHVKDKEDV------EVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKE- 140
+ ++ ++ +++ P +Q L ++AV K + +
Sbjct: 92 ADIETIGEILKKIIPTLEEGLQLPSPTATSQLPLE------SDAVECLNYQHYKGSDFDC 145
Query: 141 ECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGE 200
E ++L+ S + IIG GA IK LR T+T+IK+ C D VLI G+
Sbjct: 146 ELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLF-------QECCPHSTDRVVLIGGK 198
Query: 201 SEAVKKAL 208
+ V + +
Sbjct: 199 PDRVVECI 206
Score = 49.7 bits (117), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 94/210 (44%), Gaps = 31/210 (14%)
Query: 305 SEELV-IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTA---- 359
++E+V +R+L G VIGKGG IK++R A + V D+ + E +++++A
Sbjct: 39 TDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDS--SGPERILSISADIET 96
Query: 360 -----------------IESPDDIKSMAVE--AVLLLQTKINDEDDDTVTIRLLVSSKVI 400
+ SP + +E AV L + D +RLL+ +
Sbjct: 97 IGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCELRLLIHQSLA 156
Query: 401 GCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRL 460
G IIG G+ I E+R+ T+ +++ + C + D +V + G+ V + + I+ +
Sbjct: 157 GGIIGVKGAKIKELRENTQTTIKLF---QECCPHSTDRVVLIGGKPDRVVECIKIILDLI 213
Query: 461 RDDALKDRDGSRNPPVGADHIYSSGTGISM 490
+ +K R +P D Y G G +M
Sbjct: 214 SESPIKGRAQPYDPNF-YDETYDYG-GFTM 241
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 33/50 (66%)
Query: 37 VIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTI 86
+ ++ P + GS+IGK G+ I IR E+ A +K+ +P G++DR++TI
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITI 437
Score = 43.5 bits (101), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
+ +V P + G +IGKGG IK IR SGA I +D+ + ++ +IT+T + D I+
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQ--DQIQ 445
Query: 368 SMAVEAVLLLQTKINDEDD 386
+ A LLQ + D
Sbjct: 446 N----AQYLLQNSVKQYAD 460
Score = 36.6 bits (83), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 41/78 (52%), Gaps = 10/78 (12%)
Query: 143 QILVPSSQSANIIGKAGATIKRLRSKTRTSIKV-TPKDASEPTHSCAMEFDNFVLISGES 201
Q+ +P + +IIGK G IK++R ++ SIK+ P + SE D + I+G
Sbjct: 391 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSE---------DRIITITGTQ 441
Query: 202 EAVKKALFAISAIMYKFS 219
+ ++ A + + + +++
Sbjct: 442 DQIQNAQYLLQNSVKQYA 459
Score = 33.1 bits (74), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 25 INEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRV 83
+N + KG++ R+L + G +IG G I +R+ T+ +K+ + P + DRV
Sbjct: 133 LNYQHYKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRV 192
Query: 84 VTI 86
V I
Sbjct: 193 VLI 195
>sp|P61978|HNRPK_HUMAN Heterogeneous nuclear ribonucleoprotein K OS=Homo sapiens GN=HNRNPK
PE=1 SV=1
Length = 463
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 547 YGGLPPPL-TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISG 605
YG L P+ T +V +P + G +IGK G + IR SGA+I++ + DR+ I+G
Sbjct: 380 YGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITG 439
Query: 606 TPEQKRAAENLIQ 618
T +Q + A+ L+Q
Sbjct: 440 TQDQIQNAQYLLQ 452
Score = 50.1 bits (118), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 94/210 (44%), Gaps = 31/210 (14%)
Query: 305 SEELV-IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTA---- 359
++E+V +R+L G VIGKGG IK++R A + V D+ + E +++++A
Sbjct: 39 TDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDS--SGPERILSISADIET 96
Query: 360 -----------------IESPDDIKSMAVE--AVLLLQTKINDEDDDTVTIRLLVSSKVI 400
+ SP + +E AV L + D +RLL+ +
Sbjct: 97 IGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCELRLLIHQSLA 156
Query: 401 GCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRL 460
G IIG G+ I E+R+ T+ +++ + C + D +V + G+ V + + I+ +
Sbjct: 157 GGIIGVKGAKIKELRENTQTTIKLF---QECCPHSTDRVVLIGGKPDRVVECIKIILDLI 213
Query: 461 RDDALKDRDGSRNPPVGADHIYSSGTGISM 490
+ +K R +P D Y G G +M
Sbjct: 214 SESPIKGRAQPYDPNF-YDETYDYG-GFTM 241
Score = 49.7 bits (117), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 84/188 (44%), Gaps = 22/188 (11%)
Query: 28 KDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIY 87
K + +E V RIL G+VIGK GK I ++R + A V V P +R+++I
Sbjct: 34 KRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSV--PDSSGPERILSIS 91
Query: 88 SHVKDKEDV------EVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKE- 140
+ ++ ++ +++ P +Q L ++AV K + +
Sbjct: 92 ADIETIGEILKKIIPTLEEGLQLPSPTATSQLPLE------SDAVECLNYQHYKGSDFDC 145
Query: 141 ECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGE 200
E ++L+ S + IIG GA IK LR T+T+IK+ C D VLI G+
Sbjct: 146 ELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLF-------QECCPHSTDRVVLIGGK 198
Query: 201 SEAVKKAL 208
+ V + +
Sbjct: 199 PDRVVECI 206
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 33/50 (66%)
Query: 37 VIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTI 86
+ ++ P + GS+IGK G+ I IR E+ A +K+ +P G++DR++TI
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITI 437
Score = 43.1 bits (100), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 6/74 (8%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
+ +V P + G +IGKGG IK IR SGA I +D+ + ++ +IT+T + D I+
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQ--DQIQ 445
Query: 368 SMAVEAVLLLQTKI 381
+ A LLQ +
Sbjct: 446 N----AQYLLQNSV 455
Score = 37.7 bits (86), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 10/78 (12%)
Query: 143 QILVPSSQSANIIGKAGATIKRLRSKTRTSIKV-TPKDASEPTHSCAMEFDNFVLISGES 201
Q+ +P + +IIGK G IK++R ++ SIK+ P + SE D + I+G
Sbjct: 391 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSE---------DRIITITGTQ 441
Query: 202 EAVKKALFAISAIMYKFS 219
+ ++ A + + + ++S
Sbjct: 442 DQIQNAQYLLQNSVKQYS 459
Score = 33.5 bits (75), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 25 INEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRV 83
+N + KG++ R+L + G +IG G I +R+ T+ +K+ + P + DRV
Sbjct: 133 LNYQHYKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRV 192
Query: 84 VTI 86
V I
Sbjct: 193 VLI 195
>sp|Q3T0D0|HNRPK_BOVIN Heterogeneous nuclear ribonucleoprotein K OS=Bos taurus GN=HNRNPK
PE=2 SV=1
Length = 464
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 547 YGGLPPPL-TLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISG 605
YG L P+ T +V +P + G +IGK G + IR SGA+I++ + DR+ I+G
Sbjct: 380 YGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITG 439
Query: 606 TPEQKRAAENLIQ 618
T +Q + A+ L+Q
Sbjct: 440 TQDQIQNAQYLLQ 452
Score = 50.1 bits (118), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 84/188 (44%), Gaps = 22/188 (11%)
Query: 28 KDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIY 87
K + +E V RIL G+VIGK GK I ++R + A V V P +R+++I
Sbjct: 34 KRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSV--PDSSGPERILSIS 91
Query: 88 SHVKDKEDV------EVDDEFNDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKE- 140
+ ++ ++ +++ P +Q L ++AV K + +
Sbjct: 92 ADIETIGEILKKIIPTLEEGLQLPSPTATSQLPLE------SDAVECLNYQHYKGSDFDC 145
Query: 141 ECQILVPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGE 200
E ++L+ S + IIG GA IK LR T+T+IK+ C D VLI G+
Sbjct: 146 ELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLF-------QECCPQSTDRVVLIGGK 198
Query: 201 SEAVKKAL 208
+ V + +
Sbjct: 199 PDRVVECI 206
Score = 49.7 bits (117), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 94/210 (44%), Gaps = 31/210 (14%)
Query: 305 SEELV-IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTA---- 359
++E+V +R+L G VIGKGG IK++R A + V D+ + E +++++A
Sbjct: 39 TDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDS--SGPERILSISADIET 96
Query: 360 -----------------IESPDDIKSMAVE--AVLLLQTKINDEDDDTVTIRLLVSSKVI 400
+ SP + +E AV L + D +RLL+ +
Sbjct: 97 IGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCELRLLIHQSLA 156
Query: 401 GCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVGEVGSVRDALVQIILRL 460
G IIG G+ I E+R+ T+ +++ + C + D +V + G+ V + + I+ +
Sbjct: 157 GGIIGVKGAKIKELRENTQTTIKLF---QECCPQSTDRVVLIGGKPDRVVECIKIILDLI 213
Query: 461 RDDALKDRDGSRNPPVGADHIYSSGTGISM 490
+ +K R +P D Y G G +M
Sbjct: 214 SESPIKGRAQPYDPNF-YDETYDYG-GFTM 241
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 33/50 (66%)
Query: 37 VIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTI 86
+ ++ P + GS+IGK G+ I IR E+ A +K+ +P G++DR++TI
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITI 437
Score = 43.5 bits (101), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Query: 308 LVIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIK 367
+ +V P + G +IGKGG IK IR SGA I +D+ + ++ +IT+T + D I+
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQ--DQIQ 445
Query: 368 SMAVEAVLLLQTKINDEDD 386
+ A LLQ + D
Sbjct: 446 N----AQYLLQNSVKQYAD 460
Score = 36.6 bits (83), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 41/78 (52%), Gaps = 10/78 (12%)
Query: 143 QILVPSSQSANIIGKAGATIKRLRSKTRTSIKV-TPKDASEPTHSCAMEFDNFVLISGES 201
Q+ +P + +IIGK G IK++R ++ SIK+ P + SE D + I+G
Sbjct: 391 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSE---------DRIITITGTQ 441
Query: 202 EAVKKALFAISAIMYKFS 219
+ ++ A + + + +++
Sbjct: 442 DQIQNAQYLLQNSVKQYA 459
Score = 33.1 bits (74), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 25 INEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGAKDRV 83
+N + KG++ R+L + G +IG G I +R+ T+ +K+ + P + DRV
Sbjct: 133 LNYQHYKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPQSTDRV 192
Query: 84 VTI 86
V I
Sbjct: 193 VLI 195
>sp|Q32PX7|FUBP1_RAT Far upstream element-binding protein 1 OS=Rattus norvegicus
GN=Fubp1 PE=1 SV=1
Length = 639
Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 58/125 (46%), Gaps = 12/125 (9%)
Query: 509 ADSGSGIGMLSSSSLYGYGS----LSMGDSPYGSMSSYSSKLYGGLPPPL--------TL 556
A G G +S+ YGYG L GD P + +G PP+ T
Sbjct: 39 AKIGGDAGTSLNSNDYGYGGQKRPLEDGDQPDAKKVPPQNDSFGAQLPPMHQQQRSVMTE 98
Query: 557 EVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENL 616
E VP VG +IG+ G ++ I++ SG I+++ +R +++GTPE ++A+ L
Sbjct: 99 EYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGTPESVQSAKRL 158
Query: 617 IQAFI 621
+ +
Sbjct: 159 LDQIV 163
Score = 41.2 bits (95), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 76/167 (45%), Gaps = 10/167 (5%)
Query: 314 CPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDE--CVITVT--AIESPDDIKSM 369
P +G +IG+GG I I+Q SG +I + E C++T T +++S +
Sbjct: 102 VPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGTPESVQSAKRLLDQ 161
Query: 370 AVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDK 429
VE + + +++ + G +IGK G I ++++R + + + D
Sbjct: 162 IVEKGRPAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQ-DG 220
Query: 430 PKCADANDELVEVVGEVGSVRDALVQIILRLRDDA----LKDRDGSR 472
P+ A D+ + + G+ V+ A ++ +RD +++ GSR
Sbjct: 221 PQNTGA-DKPLRITGDPYKVQQAKEMVLELIRDQGGFREVRNEYGSR 266
Score = 39.3 bits (90), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 75/165 (45%), Gaps = 24/165 (14%)
Query: 43 CPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEF 102
PDG++G +IG+ G+ I+ I+QE+ ++++ G +R + E V+
Sbjct: 102 VPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCML---TGTPESVQSAKRL 158
Query: 103 NDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATI 162
D+ + H + NA +I++P+S++ +IGK G TI
Sbjct: 159 LDQ--IVEKGRPAPGFHH--GDGPGNAVQ-----------EIMIPASKAGLVIGKGGETI 203
Query: 163 KRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKA 207
K+L+ + + V +D + T + D + I+G+ V++A
Sbjct: 204 KQLQERAGVKM-VMIQDGPQNTGA-----DKPLRITGDPYKVQQA 242
Score = 39.3 bits (90), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 6/76 (7%)
Query: 552 PPLTLE---VLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGD---RVALISG 605
PP L+ +VP G +IGK G + +I + SGA IE+ + D ++ I G
Sbjct: 367 PPGGLQEFNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRG 426
Query: 606 TPEQKRAAENLIQAFI 621
TP+Q A LI+ I
Sbjct: 427 TPQQIDYARQLIEEKI 442
Score = 37.7 bits (86), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVD-DTKDNRDECVITVTAIESPDDI 366
+ P K G +IGKGG TIKSI Q SGA+I++ + N D + T +P I
Sbjct: 374 FNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQI 431
Score = 37.7 bits (86), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAEN 615
++V +P AVG VIG+ G + I+ +G I+ + DR+A I+G P++ + A
Sbjct: 273 IDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPDRIAQITGPPDRCQHAAE 332
Query: 616 LI 617
+I
Sbjct: 333 II 334
Score = 36.6 bits (83), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 74/353 (20%), Positives = 122/353 (34%), Gaps = 82/353 (23%)
Query: 146 VPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVK 205
VP IIG+ G I R++ ++ I++ P P SC +++G E+V+
Sbjct: 102 VPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSC--------MLTGTPESVQ 153
Query: 206 KALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLY--PNADPILPSRS 263
A + I+ K P A I+IP+ GL + I +
Sbjct: 154 SAKRLLDQIVEKGRPAPGFHHGDGPGNAVQEIMIPASK-----AGLVIGKGGETI---KQ 205
Query: 264 VPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVL---------- 313
+ G V G +TG P+ TG Q++E+V+ ++
Sbjct: 206 LQERAGVKMVMIQDGPQNTGADKPLRITGDPYK-----VQQAKEMVLELIRDQGGFREVR 260
Query: 314 ----------------CPFNKIGRVIGKGGGTIKSIRQASGAQIDV---DDTKDNRDECV 354
P +G VIG+ G IK I+ +G +I D T +R
Sbjct: 261 NEYGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPDR---- 316
Query: 355 ITVTAIESPDDIKSMAVEAVLLLQTKINDEDDDTVT-----------------------I 391
+ I P D A E + L + +
Sbjct: 317 --IAQITGPPDRCQHAAEIITDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEF 374
Query: 392 RLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVG 444
+V + G IIGK G I I +++ A + + + + P AD N +L + G
Sbjct: 375 NFIVPTGKTGLIIGKGGETIKSISQQSGARIELQR-NPPPNADPNMKLFTIRG 426
Score = 33.5 bits (75), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 557 EVLVPANAVGKVIGKAGSNLANIRKISGATIEM-SDSKSSRG-DRVALISGTPEQKRAAE 614
E+++PA+ G VIGK G + +++ +G + M D + G D+ I+G P + + A+
Sbjct: 184 EIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPYKVQQAK 243
Query: 615 NLIQAFI 621
++ I
Sbjct: 244 EMVLELI 250
Score = 33.1 bits (74), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 39 YRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGA 79
+ + P G G +IGK G+ I SI Q++ AR+++ +P P A
Sbjct: 374 FNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNA 415
>sp|Q91WJ8|FUBP1_MOUSE Far upstream element-binding protein 1 OS=Mus musculus GN=Fubp1
PE=1 SV=1
Length = 651
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 58/126 (46%), Gaps = 13/126 (10%)
Query: 509 ADSGSGIGMLSSSSLYGYGS----LSMGDSPYGSMSSYSSKLYGGLPPPL---------T 555
A G G +S+ YGYG L GD P + +G PP+ T
Sbjct: 39 AKIGGDAGTSLNSNDYGYGGQKRPLEDGDQPDAKKVPPQNDSFGAQLPPMHQQQSRSVMT 98
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAEN 615
E VP VG +IG+ G ++ I++ SG I+++ +R +++GTPE ++A+
Sbjct: 99 EEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGTPESVQSAKR 158
Query: 616 LIQAFI 621
L+ +
Sbjct: 159 LLDQIV 164
Score = 42.0 bits (97), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 76/167 (45%), Gaps = 10/167 (5%)
Query: 314 CPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDE--CVITVT--AIESPDDIKSM 369
P +G +IG+GG I I+Q SG +I + E C++T T +++S +
Sbjct: 103 VPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGTPESVQSAKRLLDQ 162
Query: 370 AVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDK 429
VE + + +++ + G +IGK G I ++++R + + + D
Sbjct: 163 IVEKGRPAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQ-DG 221
Query: 430 PKCADANDELVEVVGEVGSVRDALVQIILRLRDDA----LKDRDGSR 472
P+ A D+ + + G+ V+ A ++ +RD +++ GSR
Sbjct: 222 PQNTGA-DKPLRITGDPYKVQQAKEMVLELIRDQGGFREVRNEYGSR 267
Score = 40.4 bits (93), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 6/76 (7%)
Query: 552 PPLTLE---VLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGD---RVALISG 605
PP L+ +VP G +IGK G + +I + SGA IE+ S D ++ I G
Sbjct: 368 PPGGLQEFNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRSPPPNADPNMKLFTIRG 427
Query: 606 TPEQKRAAENLIQAFI 621
TP+Q A LI+ I
Sbjct: 428 TPQQIDYARQLIEEKI 443
Score = 39.3 bits (90), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 75/165 (45%), Gaps = 24/165 (14%)
Query: 43 CPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEF 102
PDG++G +IG+ G+ I+ I+QE+ ++++ G +R + E V+
Sbjct: 103 VPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCML---TGTPESVQSAKRL 159
Query: 103 NDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATI 162
D+ + H + NA +I++P+S++ +IGK G TI
Sbjct: 160 LDQ--IVEKGRPAPGFHH--GDGPGNAVQ-----------EIMIPASKAGLVIGKGGETI 204
Query: 163 KRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKA 207
K+L+ + + V +D + T + D + I+G+ V++A
Sbjct: 205 KQLQERAGVKM-VMIQDGPQNTGA-----DKPLRITGDPYKVQQA 243
Score = 37.7 bits (86), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAEN 615
++V +P AVG VIG+ G + I+ +G I+ + DR+A I+G P++ + A
Sbjct: 274 IDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPDRIAQITGPPDRCQHAAE 333
Query: 616 LI 617
+I
Sbjct: 334 II 335
Score = 37.7 bits (86), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDT-KDNRDECVITVTAIESPDDI 366
+ P K G +IGKGG TIKSI Q SGA+I++ + N D + T +P I
Sbjct: 375 FNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRSPPPNADPNMKLFTIRGTPQQI 432
Score = 36.2 bits (82), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 74/353 (20%), Positives = 121/353 (34%), Gaps = 82/353 (23%)
Query: 146 VPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVK 205
VP IIG+ G I R++ ++ I++ P P SC +++G E+V+
Sbjct: 103 VPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSC--------MLTGTPESVQ 154
Query: 206 KALFAISAIMYKFSPREDIPLETTVREAPPSIIIPSDVPIYPPGGLY--PNADPILPSRS 263
A + I+ K P A I+IP+ GL + I +
Sbjct: 155 SAKRLLDQIVEKGRPAPGFHHGDGPGNAVQEIMIPASK-----AGLVIGKGGETI---KQ 206
Query: 264 VPSILGAARVPDLQGYADTGNTWPVYSTGLSLVSGLVGASQSEELVIRVL---------- 313
+ G V G +TG P+ TG Q++E+V+ ++
Sbjct: 207 LQERAGVKMVMIQDGPQNTGADKPLRITGDPYK-----VQQAKEMVLELIRDQGGFREVR 261
Query: 314 ----------------CPFNKIGRVIGKGGGTIKSIRQASGAQIDV---DDTKDNRDECV 354
P +G VIG+ G IK I+ +G +I D T +R
Sbjct: 262 NEYGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPDR---- 317
Query: 355 ITVTAIESPDDIKSMAVEAVLLLQTKINDEDDDTVT-----------------------I 391
+ I P D A E + L + +
Sbjct: 318 --IAQITGPPDRCQHAAEIITDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEF 375
Query: 392 RLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVVG 444
+V + G IIGK G I I +++ A + + + P AD N +L + G
Sbjct: 376 NFIVPTGKTGLIIGKGGETIKSISQQSGARIELQR-SPPPNADPNMKLFTIRG 427
Score = 33.5 bits (75), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 557 EVLVPANAVGKVIGKAGSNLANIRKISGATIEM-SDSKSSRG-DRVALISGTPEQKRAAE 614
E+++PA+ G VIGK G + +++ +G + M D + G D+ I+G P + + A+
Sbjct: 185 EIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPYKVQQAK 244
Query: 615 NLIQAFI 621
++ I
Sbjct: 245 EMVLELI 251
Score = 33.1 bits (74), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 28/50 (56%)
Query: 39 YRILCPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYS 88
+ + P G G +IGK G+ I SI Q++ AR+++ P D + +++
Sbjct: 375 FNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRSPPPNADPNMKLFT 424
>sp|Q96AE4|FUBP1_HUMAN Far upstream element-binding protein 1 OS=Homo sapiens GN=FUBP1
PE=1 SV=3
Length = 644
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 59/126 (46%), Gaps = 13/126 (10%)
Query: 509 ADSGSGIGMLSSSSLYGYGS----LSMGDSPYGSMSSYSSKLYGGLPPPL---------T 555
A G G +S+ YGYG L GD P + + +G PP+ T
Sbjct: 43 AKIGGDAGTSLNSNDYGYGGQKRPLEDGDQPDAKKVAPQNDSFGTQLPPMHQQQSRSVMT 102
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAEN 615
E VP VG +IG+ G ++ I++ SG I+++ +R +++GTPE ++A+
Sbjct: 103 EEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGTPESVQSAKR 162
Query: 616 LIQAFI 621
L+ +
Sbjct: 163 LLDQIV 168
Score = 42.0 bits (97), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 76/167 (45%), Gaps = 10/167 (5%)
Query: 314 CPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDE--CVITVT--AIESPDDIKSM 369
P +G +IG+GG I I+Q SG +I + E C++T T +++S +
Sbjct: 107 VPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGTPESVQSAKRLLDQ 166
Query: 370 AVEAVLLLQTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIRKRTKADVRISKGDK 429
VE + + +++ + G +IGK G I ++++R + + + D
Sbjct: 167 IVEKGRPAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQ-DG 225
Query: 430 PKCADANDELVEVVGEVGSVRDALVQIILRLRDDA----LKDRDGSR 472
P+ A D+ + + G+ V+ A ++ +RD +++ GSR
Sbjct: 226 PQNTGA-DKPLRITGDPYKVQQAKEMVLELIRDQGGFREVRNEYGSR 271
Score = 39.7 bits (91), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 75/165 (45%), Gaps = 24/165 (14%)
Query: 43 CPDGVIGSVIGKSGKVINSIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEF 102
PDG++G +IG+ G+ I+ I+QE+ ++++ G +R + E V+
Sbjct: 107 VPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCML---TGTPESVQSAKRL 163
Query: 103 NDKEPLCAAQDALLKVHAAIANAVANATDNDKKRKEKEECQILVPSSQSANIIGKAGATI 162
D+ + H + NA +I++P+S++ +IGK G TI
Sbjct: 164 LDQ--IVEKGRPAPGFHH--GDGPGNAVQ-----------EIMIPASKAGLVIGKGGETI 208
Query: 163 KRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVKKA 207
K+L+ + + V +D + T + D + I+G+ V++A
Sbjct: 209 KQLQERAGVKM-VMIQDGPQNTGA-----DKPLRITGDPYKVQQA 247
Score = 39.3 bits (90), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGD---RVALISGTPEQKRA 612
+VP G +IGK G + +I + SGA IE+ + D ++ I GTP+Q
Sbjct: 379 FNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDY 438
Query: 613 AENLIQAFI 621
A LI+ I
Sbjct: 439 ARQLIEEKI 447
Score = 38.1 bits (87), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 310 IRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVD-DTKDNRDECVITVTAIESPDDI 366
+ P K G +IGKGG TIKSI Q SGA+I++ + N D + T +P I
Sbjct: 379 FNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQI 436
Score = 36.2 bits (82), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 35/62 (56%)
Query: 556 LEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAEN 615
++V +P AVG VIG+ G + I+ +G I+ + +R+A I+G P++ + A
Sbjct: 278 IDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPERIAQITGPPDRCQHAAE 337
Query: 616 LI 617
+I
Sbjct: 338 II 339
Score = 34.7 bits (78), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 8/75 (10%)
Query: 146 VPSSQSANIIGKAGATIKRLRSKTRTSIKVTPKDASEPTHSCAMEFDNFVLISGESEAVK 205
VP IIG+ G I R++ ++ I++ P P SC +++G E+V+
Sbjct: 107 VPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSC--------MLTGTPESVQ 158
Query: 206 KALFAISAIMYKFSP 220
A + I+ K P
Sbjct: 159 SAKRLLDQIVEKGRP 173
Score = 34.3 bits (77), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 67/149 (44%), Gaps = 21/149 (14%)
Query: 309 VIRVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDV--DDTKDNRDECVITVTAIESPDDI 366
V ++ P +K G VIGKGG TIK +++ +G ++ + D ++ + + +T D
Sbjct: 187 VQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITG----DPY 242
Query: 367 K-SMAVEAVLLL----------QTKINDEDDDTVTIRLLVSSKVIGCIIGKSGSIINEIR 415
K A E VL L + + I + + +G +IG++G +I +I
Sbjct: 243 KVQQAKEMVLELIRDQGGFREVRNEYGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKI- 301
Query: 416 KRTKADVRISKGDKPKCADANDELVEVVG 444
+ A VRI KP + + ++ G
Sbjct: 302 -QNDAGVRIQF--KPDDGTTPERIAQITG 327
Score = 33.5 bits (75), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 557 EVLVPANAVGKVIGKAGSNLANIRKISGATIEM-SDSKSSRG-DRVALISGTPEQKRAAE 614
E+++PA+ G VIGK G + +++ +G + M D + G D+ I+G P + + A+
Sbjct: 189 EIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPYKVQQAK 248
Query: 615 NLIQAFI 621
++ I
Sbjct: 249 EMVLELI 255
Score = 33.1 bits (74), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 39 YRILCPDGVIGSVIGKSGKVINSIRQETRARVKVV-DPFPGA 79
+ + P G G +IGK G+ I SI Q++ AR+++ +P P A
Sbjct: 379 FNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNA 420
>sp|Q9VCA8|ANKHM_DROME Ankyrin repeat and KH domain-containing protein mask OS=Drosophila
melanogaster GN=mask PE=1 SV=2
Length = 4001
Score = 47.8 bits (112), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 39/72 (54%)
Query: 550 LPPPLTLEVLVPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQ 609
+P +V VP NA+ +VIG+ GSN+ IR +GA IE+ ++ +R I G +
Sbjct: 3033 VPEMTCKKVQVPVNAISRVIGRGGSNINAIRATTGAHIEVEKQGKNQSERCITIKGLTDA 3092
Query: 610 KRAAENLIQAFI 621
+ A LI A I
Sbjct: 3093 TKQAHMLILALI 3104
Score = 46.2 bits (108), Expect = 8e-04, Method: Composition-based stats.
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 6/89 (6%)
Query: 311 RVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITVTAIESPDDIKSMA 370
+V P N I RVIG+GG I +IR +GA I+V+ N+ E IT+ +
Sbjct: 3040 KVQVPVNAISRVIGRGGSNINAIRATTGAHIEVEKQGKNQSERCITIKGLTDATK----- 3094
Query: 371 VEAVLLLQTKINDEDDDTVTIRLLVSSKV 399
+A +L+ I D D D + + ++S +
Sbjct: 3095 -QAHMLILALIKDPDVDILQMLPRINSSI 3122
>sp|Q8IWZ3|ANKH1_HUMAN Ankyrin repeat and KH domain-containing protein 1 OS=Homo sapiens
GN=ANKHD1 PE=1 SV=1
Length = 2542
Score = 47.4 bits (111), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%)
Query: 560 VPANAVGKVIGKAGSNLANIRKISGATIEMSDSKSSRGDRVALISGTPEQKRAAENLIQA 619
VPA+ V +++G+ G N+ I+ ++GA I++ K G+R+ I G E R A LI A
Sbjct: 1702 VPASVVSRIMGRGGCNITAIQDVTGAHIDVDKQKDKNGERMITIRGGTESTRYAVQLINA 1761
Query: 620 FI 621
I
Sbjct: 1762 LI 1763
Score = 41.6 bits (96), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 30/47 (63%)
Query: 311 RVLCPFNKIGRVIGKGGGTIKSIRQASGAQIDVDDTKDNRDECVITV 357
++ P + + R++G+GG I +I+ +GA IDVD KD E +IT+
Sbjct: 1699 KLSVPASVVSRIMGRGGCNITAIQDVTGAHIDVDKQKDKNGERMITI 1745
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.133 0.372
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 239,254,923
Number of Sequences: 539616
Number of extensions: 10963551
Number of successful extensions: 31530
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 423
Number of HSP's successfully gapped in prelim test: 174
Number of HSP's that attempted gapping in prelim test: 28611
Number of HSP's gapped (non-prelim): 2784
length of query: 624
length of database: 191,569,459
effective HSP length: 124
effective length of query: 500
effective length of database: 124,657,075
effective search space: 62328537500
effective search space used: 62328537500
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 64 (29.3 bits)