BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>006945
MSKTLGKVLEHDDMDQDRTKGKKLDTGFSGTTKQWEETFGSRYPKAGAMYRGTAPSPLTT
IPFSSDIVSKEVVSSKECQKIINIPDLKIVEVFVEIVAVKNLPEDHKDKGDLFVFFSKSQ
PDIFFNAKQKLTILSKSGMKQVASFQCEATGELLFELVSHSTSKIPMTGASKTMGTASLS
LQNFISPISKLAVEQWFDLVPRSGNVSSKPISLRIAVSFTIPTLAPHLLRMVRSRPLSKS
SCFFPLPGRIQPAKSWTRVIDETQSEVISLQMRDPKKEKGGDNCTLRKQVIGVTESGETI
TLAEMVETGWSVMDCCWSLKKKSSKEGHLFELLGNRMINLFPGRKLDYEHKHCQKQRSEE
DFVTAIEFSPADPYGKAIALLDLKSGVIKVKEEWFLLLGIISAFILSDALKEGYDGFTAN
NEVMKEMKSASDSVEGLQEEGICTKMIPPVGDEPELNKNMTNEVNSGGCGGCGSGCGGGR
VASVKSSGCGGCGGGGGGCGNMVNGGGCGGCGGGCGGGCGGGCGGGCAALVKSSGCGGGE
CGGGCGSGGCGAGCGNMVKTGGCGSGGCGAGCGNTVKTGGCGGCGGGCGGNLVAKSASEY
KVGNACNEEQSKETSVSMNETVVA

High Scoring Gene Products

Symbol, full name Information P value
AT2G22660 protein from Arabidopsis thaliana 2.7e-116
AT4G37900 protein from Arabidopsis thaliana 7.3e-114

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  006945
        (624 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2065983 - symbol:AT2G22660 "AT2G22660" species...  1146  2.7e-116  1
TAIR|locus:2121013 - symbol:AT4G37900 species:3702 "Arabi...  1123  7.3e-114  1


>TAIR|locus:2065983 [details] [associations]
            symbol:AT2G22660 "AT2G22660" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0005737 "cytoplasm" evidence=ISM]
            [GO:0008150 "biological_process" evidence=ND] [GO:0005886 "plasma
            membrane" evidence=IDA] GO:GO:0005886 EMBL:CP002685
            GenomeReviews:CT485783_GR EMBL:AC006340 InterPro:IPR009836
            Pfam:PF07173 eggNOG:NOG117547 HOGENOM:HOG000243905
            ProtClustDB:CLSN2681427 IPI:IPI00657066 PIR:C84615
            RefSeq:NP_001031396.1 UniGene:At.21604 UniGene:At.70762
            PaxDb:Q9ZQ47 PRIDE:Q9ZQ47 EnsemblPlants:AT2G22660.2 GeneID:816797
            KEGG:ath:AT2G22660 TAIR:At2g22660 OMA:GECGNMV PhylomeDB:Q9ZQ47
            ArrayExpress:Q9ZQ47 Genevestigator:Q9ZQ47 Uniprot:Q9ZQ47
        Length = 819

 Score = 1146 (408.5 bits), Expect = 2.7e-116, P = 2.7e-116
 Identities = 229/431 (53%), Positives = 311/431 (72%)

Query:     1 MSKTLGKVLEHDDMDQDRTKGKKLDTGFSGTTKQWEETFGSRYPKAGAMYRGTAPSPLTT 60
             M K +GKVLEHDD D DR KGKKLDTGFS TT QWEETFG+RY KAGAM+RG  P P+T 
Sbjct:   242 MVKLIGKVLEHDDTDSDRGKGKKLDTGFSKTTAQWEETFGTRYWKAGAMHRGKTPVPVTN 301

Query:    61 IPFSSDIVSKEVVSSKECQKIINIPDLKIVEVFVEIVAVKNLPEDHKDKGDLFVFFSKSQ 120
              P++SD++ K+  +  + Q +I  P++++VEV +EI+ V+NLP+ HK  G + V FSK+Q
Sbjct:   302 SPYASDVLVKDPTAKDDFQNLIQFPEVEVVEVLLEIIGVRNLPDGHK--GKVSVMFSKTQ 359

Query:   121 PDIFFNAKQKLTILSKSGMKQVASFQCEATGELLFELVSHSTSKIPMTGASKTMGTASLS 180
             PD  FNA+++LTILS+ G KQVA+FQCE TGEL+F+L+S S SKIP++   K +G ASLS
Sbjct:   360 PDSLFNAERRLTILSEVGEKQVATFQCEPTGELVFKLISCSPSKIPVSREPKNLGFASLS 419

Query:   181 LQNFISP-ISKLAVEQWFDLVPRSGN-VSSKPISLRIAVSFTIPTLAPHLLRMVRSRPLS 238
             L+ F+ P I++L+VE+W +L P  G+   +KPISLR+AVSFT P  +P +L MV+SRP  
Sbjct:   420 LKEFLFPVITQLSVEKWLELTPSKGSQTDTKPISLRVAVSFTPPVRSPSVLHMVQSRPSC 479

Query:   239 KSSCFFPLPGRIQPAKSWTRVIDETQSEVISLQMRDPKKEKGGDNCTLRKQVIGVTESGE 298
             K SCFFP+ G+ + AKS T ++DETQ+EVI+LQ+R+     GG     ++QV+GVT+SGE
Sbjct:   480 KGSCFFPIIGKSRLAKSSTHIVDETQTEVITLQIRN--SADGGILKDDQRQVMGVTDSGE 537

Query:   299 TITLAEMVETGWSVMDCCWSLKK--KSSKEGHLFELLGNRMINLFPGRKLDYEHKHCQKQ 356
             T  LA    + WS++D  WSLK+   S+ +  LFE+LG R++ +F GRKLDYE KHC   
Sbjct:   538 TRVLAVYTGSFWSLLDSKWSLKQINASTADNPLFEILGPRVVKIFSGRKLDYEPKHCANL 597

Query:   357 RSEEDFVTAIEFSPADPYGKAIALLDLKSGVIKVKEEWFLLLGIISAFILSDALKEG-YD 415
             RS+ DF+T +EFS   PYGK + L+D++ G I+ KE W LL GI+SAFIL   LK+G  +
Sbjct:   598 RSDLDFMTLVEFSKQHPYGKTVGLVDMRFGSIEAKENWLLLPGIVSAFILHTVLKKGGSE 657

Query:   416 GFTANNEVMKE 426
             GF    + +KE
Sbjct:   658 GFNVTTKDIKE 668


>TAIR|locus:2121013 [details] [associations]
            symbol:AT4G37900 species:3702 "Arabidopsis thaliana"
            [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] [GO:0006865 "amino acid
            transport" evidence=RCA] EMBL:CP002687 GenomeReviews:CT486007_GR
            EMBL:AL161592 EMBL:AL035538 InterPro:IPR009836 Pfam:PF07173
            eggNOG:NOG117547 HSSP:P02876 IPI:IPI00547179 PIR:T05617
            RefSeq:NP_195503.1 UniGene:At.43494 PaxDb:Q9SZJ2 PRIDE:Q9SZJ2
            EnsemblPlants:AT4G37900.1 GeneID:829946 KEGG:ath:AT4G37900
            TAIR:At4g37900 HOGENOM:HOG000243905 InParanoid:Q9SZJ2 OMA:RCLYDGP
            PhylomeDB:Q9SZJ2 ProtClustDB:CLSN2681427 ArrayExpress:Q9SZJ2
            Genevestigator:Q9SZJ2 Uniprot:Q9SZJ2
        Length = 787

 Score = 1123 (400.4 bits), Expect = 7.3e-114, P = 7.3e-114
 Identities = 234/447 (52%), Positives = 309/447 (69%)

Query:     1 MSKTLGKVLEHDDMDQDRTKGKKLDTGFSGTTKQWEETFGSRYPKAGAMYRGTAPSPLTT 60
             ++K +GKVLEHDD D DR+KGKKLDTGFSGTT QWEETFG RY KAGAM RG  P P+TT
Sbjct:   240 LTKMIGKVLEHDDTDSDRSKGKKLDTGFSGTTAQWEETFGRRYWKAGAMNRGNTPKPVTT 299

Query:    61 IPFSSDIVSKEVVSSKECQKIINIPDLKIVEVFVEIVAVKNLPEDHKDKGDLFVFFSKSQ 120
              P+      K +   +E Q +I  P++K++EV +EIV VKNLP+ HK  G +FV FSK+Q
Sbjct:   300 SPYVCS-GKKSIAKEEESQNVIQYPEVKVIEVILEIVGVKNLPDAHK--GKVFVLFSKTQ 356

Query:   121 PDIFFNAKQKLTILSKS-GMKQVASFQCEATGELLFELVSHSTSKIPMTGASKTMGTASL 179
             PD  FNA+++LT+LS+S G KQVA FQCE TGEL F+L+S   SK      SK++G  SL
Sbjct:   357 PDSLFNAERRLTVLSESCGEKQVALFQCEPTGELSFQLMS---SK------SKSLGFTSL 407

Query:   180 SLQNFISPISKLAVEQWFDLVP-RSGNVSS-KPISLRIAVSFTIPTLAPHLLRMVRSRPL 237
             S   F+SP++KL+VE+W +L P + G      PISLR+AVSFT PT +P +L +V++RP 
Sbjct:   408 SFSEFLSPVTKLSVEKWLELTPTKRGKADDPNPISLRVAVSFTPPTRSPTVLHLVQARPS 467

Query:   238 SKSSCFFPLPGRIQPAKSWTRVIDETQSEVISLQMRDPKKEKG-GDNCTLRKQVIGVTES 296
              K SCF P+  +++ AKS+TRV+DET++EVI+LQMR+       GD    R+QVIGV E 
Sbjct:   468 LKGSCFLPMLRKVRLAKSFTRVVDETETEVINLQMRNSNDAAPKGD----RRQVIGVKEC 523

Query:   297 GETITLAEMVETGWSVMDCCWSLKK--KSSKEGHLFELLGNRMINLFPGRKLDYEHKHCQ 354
             GET  LAE   T WS++D  WSLK+    + +G LFEL G RM+ ++ GRKL+YE KHC 
Sbjct:   524 GETYVLAEYDGTFWSLLDSKWSLKQTCNPATDGPLFELSGTRMVKVYSGRKLEYEPKHCS 583

Query:   355 KQRSEEDFVTAIEFSPADPYGKAIALLDLKSGVIKVKEEWFLLLGIISAFILSDALK-EG 413
             K RSE+DF+TA+EFS   PYGKA+ LLDLK G I+  E+W +L G++S+FILSD LK EG
Sbjct:   584 KLRSEQDFMTAVEFSKQHPYGKAVGLLDLKFGSIEANEKWLVLPGMVSSFILSDLLKKEG 643

Query:   414 YDGFTANNEVMKEMKSASDSVEGLQEE 440
             +     +      +   S  ++ L +E
Sbjct:   644 FSAAAKDTVKANGITEESTEIDVLSQE 670


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.314   0.130   0.368    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      624       522   0.00090  119 3  11 23  0.44    34
                                                     35  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  618 (66 KB)
  Total size of DFA:  289 KB (2151 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  43.66u 0.09s 43.75t   Elapsed:  00:00:02
  Total cpu time:  43.66u 0.09s 43.75t   Elapsed:  00:00:02
  Start:  Sat May 11 04:34:45 2013   End:  Sat May 11 04:34:47 2013

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