Query 006947
Match_columns 624
No_of_seqs 581 out of 2351
Neff 6.2
Searched_HMMs 46136
Date Thu Mar 28 16:46:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006947.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/006947hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1595 CCCH-type Zn-finger pr 100.0 7.6E-71 1.7E-75 591.6 15.8 412 45-565 15-436 (528)
2 KOG4412 26S proteasome regulat 99.9 3.7E-27 8E-32 224.3 9.3 158 31-216 27-185 (226)
3 KOG4412 26S proteasome regulat 99.9 2.4E-24 5.2E-29 205.2 11.6 149 33-211 64-212 (226)
4 KOG0509 Ankyrin repeat and DHH 99.9 4.1E-24 8.9E-29 234.9 13.6 160 31-218 68-227 (600)
5 PHA02859 ankyrin repeat protei 99.9 7.9E-22 1.7E-26 196.7 16.2 154 33-214 43-203 (209)
6 PHA02791 ankyrin-like protein; 99.9 1.7E-21 3.7E-26 203.2 17.3 113 35-168 24-137 (284)
7 KOG0509 Ankyrin repeat and DHH 99.9 6.1E-22 1.3E-26 217.9 14.3 158 30-215 33-190 (600)
8 PHA02878 ankyrin repeat protei 99.9 3.9E-21 8.5E-26 213.4 16.6 154 30-215 156-312 (477)
9 PHA02946 ankyin-like protein; 99.9 5.1E-21 1.1E-25 211.5 16.4 158 29-214 60-219 (446)
10 PHA02874 ankyrin repeat protei 99.9 9E-21 1.9E-25 208.0 17.4 166 32-214 26-234 (434)
11 PHA02875 ankyrin repeat protei 99.9 7.6E-21 1.7E-25 206.6 16.6 154 32-214 26-179 (413)
12 PHA02874 ankyrin repeat protei 99.8 1.8E-20 3.9E-25 205.6 17.7 158 43-215 3-202 (434)
13 PHA02875 ankyrin repeat protei 99.8 1.4E-20 3E-25 204.6 16.7 155 32-215 59-214 (413)
14 PHA02878 ankyrin repeat protei 99.8 1.2E-20 2.5E-25 209.6 15.2 167 29-211 58-277 (477)
15 PHA02859 ankyrin repeat protei 99.8 5.3E-20 1.1E-24 183.6 15.1 148 38-212 18-167 (209)
16 PHA02791 ankyrin-like protein; 99.8 5.8E-20 1.3E-24 191.7 15.4 160 39-223 59-226 (284)
17 PHA03095 ankyrin-like protein; 99.8 6.4E-20 1.4E-24 202.0 16.4 152 31-190 73-251 (471)
18 PHA03100 ankyrin repeat protei 99.8 5.2E-20 1.1E-24 203.4 15.5 117 85-215 138-262 (480)
19 KOG0508 Ankyrin repeat protein 99.8 1.6E-20 3.6E-25 199.7 10.5 151 34-215 77-227 (615)
20 PHA03095 ankyrin-like protein; 99.8 9E-20 1.9E-24 200.8 16.6 160 27-214 33-198 (471)
21 PHA02716 CPXV016; CPX019; EVM0 99.8 5.9E-20 1.3E-24 212.0 15.1 154 32-213 167-362 (764)
22 PHA02798 ankyrin-like protein; 99.8 9.5E-20 2.1E-24 203.2 16.2 157 33-215 101-303 (489)
23 PHA02716 CPXV016; CPX019; EVM0 99.8 1.1E-19 2.5E-24 209.6 15.9 154 30-209 201-405 (764)
24 PHA02989 ankyrin repeat protei 99.8 1.6E-19 3.5E-24 201.5 16.1 157 30-215 97-301 (494)
25 PHA02876 ankyrin repeat protei 99.8 2E-19 4.4E-24 208.2 17.4 169 31-214 297-487 (682)
26 PHA02946 ankyin-like protein; 99.8 1.8E-19 3.9E-24 199.2 16.0 160 29-215 93-254 (446)
27 PHA03100 ankyrin repeat protei 99.8 1.6E-19 3.4E-24 199.5 15.2 156 32-215 26-188 (480)
28 PHA02743 Viral ankyrin protein 99.8 1.6E-19 3.5E-24 173.8 13.1 134 34-190 13-155 (166)
29 PHA02876 ankyrin repeat protei 99.8 2.6E-19 5.6E-24 207.3 17.1 170 30-215 167-387 (682)
30 PHA02741 hypothetical protein; 99.8 1.6E-19 3.4E-24 174.0 12.4 134 33-188 13-157 (169)
31 KOG0508 Ankyrin repeat protein 99.8 5.8E-20 1.2E-24 195.5 7.8 166 30-216 31-196 (615)
32 PHA02989 ankyrin repeat protei 99.8 3.8E-19 8.2E-24 198.6 14.7 157 27-190 22-212 (494)
33 PHA02798 ankyrin-like protein; 99.8 4.6E-19 1E-23 197.7 15.3 173 26-214 56-269 (489)
34 PHA02795 ankyrin-like protein; 99.8 5.6E-19 1.2E-23 192.6 15.3 149 36-215 111-266 (437)
35 KOG0502 Integral membrane anky 99.8 6.9E-20 1.5E-24 179.3 7.1 170 29-215 84-271 (296)
36 KOG0514 Ankyrin repeat protein 99.8 1.3E-19 2.7E-24 188.1 9.2 154 34-216 261-420 (452)
37 KOG0510 Ankyrin repeat protein 99.8 3.1E-19 6.7E-24 200.0 12.3 175 28-216 212-390 (929)
38 PHA02917 ankyrin-like protein; 99.8 9.2E-19 2E-23 201.7 16.5 172 30-216 21-242 (661)
39 PHA02736 Viral ankyrin protein 99.8 5.8E-19 1.3E-23 166.8 9.6 144 29-190 5-153 (154)
40 KOG0502 Integral membrane anky 99.8 3.5E-19 7.7E-24 174.4 7.7 132 29-180 148-279 (296)
41 PLN03192 Voltage-dependent pot 99.8 2.8E-18 6E-23 202.8 16.3 146 40-212 524-698 (823)
42 KOG0510 Ankyrin repeat protein 99.8 9E-19 1.9E-23 196.3 10.0 147 34-209 266-416 (929)
43 PLN03192 Voltage-dependent pot 99.8 5.5E-18 1.2E-22 200.4 16.3 119 85-215 522-667 (823)
44 KOG0512 Fetal globin-inducing 99.7 7.4E-18 1.6E-22 160.0 12.1 147 40-214 62-209 (228)
45 PHA02884 ankyrin repeat protei 99.7 1.3E-17 2.9E-22 174.9 14.0 121 35-169 26-147 (300)
46 PHA02795 ankyrin-like protein; 99.7 3.5E-17 7.5E-22 178.6 14.9 139 39-190 147-289 (437)
47 KOG4177 Ankyrin [Cell wall/mem 99.7 2.2E-17 4.7E-22 194.7 11.7 154 33-216 466-619 (1143)
48 TIGR00870 trp transient-recept 99.7 2.9E-17 6.2E-22 192.2 12.5 181 31-216 42-270 (743)
49 PHA02917 ankyrin-like protein; 99.7 7.8E-17 1.7E-21 185.8 14.9 173 28-211 55-275 (661)
50 KOG0195 Integrin-linked kinase 99.7 6.2E-17 1.3E-21 163.8 11.1 137 31-190 24-160 (448)
51 PHA02741 hypothetical protein; 99.7 1.1E-16 2.5E-21 154.1 11.7 119 85-215 18-144 (169)
52 KOG0512 Fetal globin-inducing 99.7 1.9E-16 4.1E-21 150.5 11.4 134 29-180 85-219 (228)
53 KOG0505 Myosin phosphatase, re 99.7 7.3E-17 1.6E-21 174.9 9.6 157 27-212 59-273 (527)
54 KOG4177 Ankyrin [Cell wall/mem 99.7 1.2E-16 2.7E-21 188.4 11.6 159 29-212 495-653 (1143)
55 PF12796 Ank_2: Ankyrin repeat 99.7 4.2E-16 9.2E-21 133.4 11.1 89 45-156 1-89 (89)
56 PHA02743 Viral ankyrin protein 99.7 3.6E-16 7.9E-21 150.5 11.1 125 78-215 10-140 (166)
57 PHA02730 ankyrin-like protein; 99.7 5E-16 1.1E-20 176.9 12.7 140 28-190 27-182 (672)
58 KOG0514 Ankyrin repeat protein 99.6 6.1E-16 1.3E-20 160.9 11.5 127 29-174 290-422 (452)
59 PHA02730 ankyrin-like protein; 99.6 1.5E-15 3.2E-20 173.1 14.9 142 44-213 346-506 (672)
60 KOG0195 Integrin-linked kinase 99.6 1.5E-16 3.2E-21 161.1 5.9 116 79-210 25-140 (448)
61 PHA02884 ankyrin repeat protei 99.6 1.2E-15 2.5E-20 160.3 12.5 119 82-215 26-149 (300)
62 cd00204 ANK ankyrin repeats; 99.6 7.8E-15 1.7E-19 129.2 13.7 124 36-182 2-125 (126)
63 KOG0507 CASK-interacting adapt 99.6 2E-15 4.4E-20 168.6 10.0 165 31-218 39-204 (854)
64 KOG4214 Myotrophin and similar 99.6 5.5E-15 1.2E-19 127.6 8.7 106 43-168 4-109 (117)
65 TIGR00870 trp transient-recept 99.6 7E-15 1.5E-19 172.2 12.3 147 39-214 15-219 (743)
66 PHA02736 Viral ankyrin protein 99.6 3.4E-15 7.3E-20 141.1 7.5 102 35-153 49-153 (154)
67 PF12796 Ank_2: Ankyrin repeat 99.6 1.8E-14 4E-19 123.2 10.9 86 92-190 1-86 (89)
68 KOG3676 Ca2+-permeable cation 99.6 1.9E-14 4E-19 162.7 12.2 161 32-214 134-319 (782)
69 COG0666 Arp FOG: Ankyrin repea 99.5 9.5E-14 2.1E-18 134.1 13.7 132 32-186 64-203 (235)
70 KOG0505 Myosin phosphatase, re 99.5 3.3E-14 7.2E-19 154.5 10.9 143 43-215 42-243 (527)
71 PHA02792 ankyrin-like protein; 99.5 9.8E-14 2.1E-18 157.0 14.6 131 41-190 339-480 (631)
72 PHA02792 ankyrin-like protein; 99.5 1.9E-13 4.1E-18 154.7 14.4 141 43-212 308-452 (631)
73 KOG0507 CASK-interacting adapt 99.5 6.1E-14 1.3E-18 156.9 9.5 153 43-214 5-159 (854)
74 cd00204 ANK ankyrin repeats; 99.5 7.6E-13 1.7E-17 116.5 12.8 115 84-214 3-117 (126)
75 KOG3676 Ca2+-permeable cation 99.4 3.6E-13 7.8E-18 152.5 11.1 137 39-185 182-330 (782)
76 KOG1710 MYND Zn-finger and ank 99.4 1.2E-12 2.5E-17 133.1 10.6 121 39-177 10-130 (396)
77 PTZ00322 6-phosphofructo-2-kin 99.4 2E-12 4.4E-17 149.8 12.2 106 43-167 84-196 (664)
78 KOG0515 p53-interacting protei 99.4 1.5E-12 3.3E-17 140.6 9.8 122 43-185 552-674 (752)
79 KOG4369 RTK signaling protein 99.3 2.4E-12 5.2E-17 147.6 7.2 150 38-214 754-903 (2131)
80 KOG4214 Myotrophin and similar 99.3 1.1E-11 2.4E-16 107.3 8.0 90 91-190 5-94 (117)
81 PF13637 Ank_4: Ankyrin repeat 99.3 9.2E-12 2E-16 97.6 6.5 54 88-146 1-54 (54)
82 COG0666 Arp FOG: Ankyrin repea 99.3 6.6E-11 1.4E-15 114.2 13.3 118 85-215 70-192 (235)
83 PF13857 Ank_5: Ankyrin repeat 99.2 4.8E-12 1E-16 100.4 4.1 56 107-166 1-56 (56)
84 PTZ00322 6-phosphofructo-2-kin 99.2 2.5E-11 5.5E-16 140.7 11.5 87 90-185 84-170 (664)
85 KOG1677 CCCH-type Zn-finger pr 99.2 1.1E-11 2.4E-16 132.0 5.7 90 276-367 98-210 (332)
86 PF13857 Ank_5: Ankyrin repeat 99.2 1.8E-11 3.8E-16 97.2 4.2 45 84-130 12-56 (56)
87 KOG4369 RTK signaling protein 99.2 2.3E-11 5E-16 139.7 5.9 126 25-168 774-901 (2131)
88 PF13637 Ank_4: Ankyrin repeat 99.1 1.8E-10 3.8E-15 90.3 6.0 54 41-108 1-54 (54)
89 KOG1710 MYND Zn-finger and ank 99.0 4.5E-10 9.7E-15 114.6 8.5 99 29-145 33-131 (396)
90 KOG1595 CCCH-type Zn-finger pr 99.0 7.6E-10 1.6E-14 121.2 10.6 221 40-334 57-299 (528)
91 KOG0515 p53-interacting protei 99.0 5.8E-10 1.3E-14 120.9 7.9 90 92-190 554-643 (752)
92 KOG0506 Glutaminase (contains 98.9 2.1E-09 4.6E-14 115.6 6.7 98 34-149 499-596 (622)
93 KOG0818 GTPase-activating prot 98.8 2.8E-08 6.1E-13 107.4 9.7 95 84-182 123-223 (669)
94 KOG0783 Uncharacterized conser 98.7 1.1E-08 2.3E-13 115.9 4.3 83 82-168 46-128 (1267)
95 COG5063 CTH1 CCCH-type Zn-fing 98.5 3.7E-08 7.9E-13 101.1 3.0 71 298-368 223-308 (351)
96 KOG0818 GTPase-activating prot 98.5 4.7E-07 1E-11 98.2 9.6 96 34-147 120-221 (669)
97 PF13606 Ank_3: Ankyrin repeat 98.4 2E-07 4.4E-12 64.8 3.7 29 87-116 1-29 (30)
98 KOG0705 GTPase-activating prot 98.4 6.7E-07 1.5E-11 98.5 8.3 60 86-150 659-718 (749)
99 KOG0506 Glutaminase (contains 98.4 3.2E-07 7E-12 99.1 5.5 89 85-178 503-592 (622)
100 KOG0782 Predicted diacylglycer 98.4 1.8E-06 3.9E-11 94.7 10.5 109 45-171 870-979 (1004)
101 PF00023 Ank: Ankyrin repeat H 98.4 5.5E-07 1.2E-11 63.5 4.4 30 88-118 2-31 (33)
102 PF13606 Ank_3: Ankyrin repeat 98.4 4.8E-07 1E-11 62.9 3.8 30 122-154 1-30 (30)
103 PF00023 Ank: Ankyrin repeat H 98.3 5.8E-07 1.3E-11 63.4 4.2 33 122-157 1-33 (33)
104 KOG0522 Ankyrin repeat protein 98.2 2.8E-06 6.2E-11 93.3 7.9 90 90-183 22-112 (560)
105 KOG0783 Uncharacterized conser 98.2 6.9E-07 1.5E-11 101.7 3.3 86 32-132 43-128 (1267)
106 KOG0705 GTPase-activating prot 98.2 4.7E-06 1E-10 92.1 9.0 91 92-190 628-721 (749)
107 COG5063 CTH1 CCCH-type Zn-fing 98.1 2.3E-06 5E-11 88.1 4.5 101 260-361 220-341 (351)
108 KOG3609 Receptor-activated Ca2 98.1 1.1E-05 2.3E-10 93.2 9.9 132 34-191 18-159 (822)
109 KOG0522 Ankyrin repeat protein 98.1 8E-06 1.7E-10 89.9 7.5 88 43-148 22-110 (560)
110 KOG1677 CCCH-type Zn-finger pr 97.9 5.7E-06 1.2E-10 88.4 3.7 67 264-331 128-206 (332)
111 KOG0511 Ankyrin repeat protein 97.9 4.7E-05 1E-09 80.9 10.1 85 42-148 37-121 (516)
112 KOG0520 Uncharacterized conser 97.9 1.2E-05 2.5E-10 94.6 5.7 132 31-180 564-701 (975)
113 KOG0521 Putative GTPase activa 97.9 1.2E-05 2.7E-10 94.4 5.9 79 86-169 654-732 (785)
114 KOG0782 Predicted diacylglycer 97.9 2E-05 4.3E-10 86.8 6.0 100 32-148 890-989 (1004)
115 PF00642 zf-CCCH: Zinc finger 97.8 3.2E-06 6.9E-11 57.4 -0.9 26 301-326 1-27 (27)
116 KOG0511 Ankyrin repeat protein 97.8 6E-05 1.3E-09 80.1 8.1 73 90-167 38-110 (516)
117 KOG2384 Major histocompatibili 97.7 9.2E-05 2E-09 72.4 6.8 73 79-156 3-76 (223)
118 KOG2384 Major histocompatibili 97.6 0.00011 2.5E-09 71.8 6.4 67 112-182 2-69 (223)
119 KOG0521 Putative GTPase activa 97.5 0.00011 2.4E-09 86.6 6.0 91 36-145 651-741 (785)
120 KOG2494 C3H1-type Zn-finger pr 97.5 2.4E-05 5.2E-10 81.8 -0.2 65 303-369 37-104 (331)
121 smart00356 ZnF_C3H1 zinc finge 97.4 8.4E-05 1.8E-09 49.8 2.2 26 300-325 1-26 (27)
122 KOG0520 Uncharacterized conser 97.3 0.00022 4.7E-09 84.2 4.8 125 82-216 568-693 (975)
123 KOG3609 Receptor-activated Ca2 97.0 0.00096 2.1E-08 77.5 6.6 101 30-155 51-160 (822)
124 PF00642 zf-CCCH: Zinc finger 96.8 0.00035 7.5E-09 47.5 -0.0 23 336-358 1-27 (27)
125 KOG2505 Ankyrin repeat protein 96.5 0.0052 1.1E-07 67.8 6.7 64 101-168 404-472 (591)
126 smart00248 ANK ankyrin repeats 96.2 0.0067 1.4E-07 38.5 3.7 27 88-115 2-28 (30)
127 smart00248 ANK ankyrin repeats 95.9 0.013 2.8E-07 37.1 4.0 29 122-153 1-29 (30)
128 KOG1040 Polyadenylation factor 95.6 0.0081 1.8E-07 64.2 3.1 64 280-358 62-129 (325)
129 smart00356 ZnF_C3H1 zinc finge 95.3 0.013 2.7E-07 39.1 2.1 24 335-358 1-27 (27)
130 KOG2505 Ankyrin repeat protein 94.4 0.051 1.1E-06 60.2 5.0 68 54-131 404-471 (591)
131 KOG3702 Nuclear polyadenylated 94.0 0.062 1.3E-06 61.4 4.7 89 268-359 544-646 (681)
132 KOG1492 C3H1-type Zn-finger pr 93.9 0.025 5.5E-07 56.5 1.4 66 273-357 215-282 (377)
133 PF14608 zf-CCCH_2: Zinc finge 93.5 0.053 1.2E-06 33.8 1.8 19 305-325 1-19 (19)
134 KOG2333 Uncharacterized conser 92.9 0.041 9E-07 60.8 1.2 60 301-362 74-144 (614)
135 COG5252 Uncharacterized conser 92.9 0.019 4.1E-07 57.9 -1.4 61 300-360 82-177 (299)
136 KOG1763 Uncharacterized conser 92.2 0.02 4.4E-07 59.4 -2.1 29 301-329 90-118 (343)
137 KOG1040 Polyadenylation factor 91.7 0.12 2.7E-06 55.3 2.9 77 273-366 85-165 (325)
138 KOG2494 C3H1-type Zn-finger pr 89.9 0.19 4.1E-06 53.3 2.2 69 251-330 29-97 (331)
139 COG5084 YTH1 Cleavage and poly 89.3 0.39 8.3E-06 50.6 4.0 64 281-358 91-158 (285)
140 PF06128 Shigella_OspC: Shigel 88.7 2.1 4.6E-05 43.7 8.5 118 44-190 156-281 (284)
141 PF14608 zf-CCCH_2: Zinc finge 88.4 0.33 7.1E-06 30.3 1.7 18 340-357 1-19 (19)
142 COG5152 Uncharacterized conser 86.8 0.26 5.7E-06 48.7 0.8 31 298-328 136-167 (259)
143 KOG3702 Nuclear polyadenylated 82.3 1.8 3.9E-05 49.9 5.0 77 269-359 586-666 (681)
144 KOG2185 Predicted RNA-processi 82.0 0.8 1.7E-05 49.9 2.0 56 269-326 100-163 (486)
145 KOG1492 C3H1-type Zn-finger pr 81.3 1.5 3.3E-05 44.1 3.6 74 274-358 242-334 (377)
146 PF06128 Shigella_OspC: Shigel 80.8 4.1 8.8E-05 41.7 6.3 99 39-151 177-279 (284)
147 COG5084 YTH1 Cleavage and poly 80.3 11 0.00023 40.0 9.6 73 274-361 113-192 (285)
148 KOG1813 Predicted E3 ubiquitin 79.4 0.8 1.7E-05 48.1 0.9 55 298-352 181-264 (313)
149 KOG4791 Uncharacterized conser 78.8 0.84 1.8E-05 50.6 0.9 68 276-358 14-84 (667)
150 PF11929 DUF3447: Domain of un 71.6 6.5 0.00014 32.9 4.3 47 90-148 8-54 (76)
151 PF11929 DUF3447: Domain of un 69.8 9.7 0.00021 31.9 5.0 51 42-113 7-57 (76)
152 KOG1039 Predicted E3 ubiquitin 57.9 4 8.7E-05 44.3 0.6 24 304-327 9-32 (344)
153 KOG0153 Predicted RNA-binding 57.2 5.9 0.00013 42.6 1.7 36 292-327 150-185 (377)
154 PF03158 DUF249: Multigene fam 53.6 65 0.0014 32.2 8.1 44 127-183 147-190 (192)
155 KOG1763 Uncharacterized conser 52.3 3.3 7.2E-05 43.5 -1.1 27 274-301 101-127 (343)
156 KOG4791 Uncharacterized conser 44.8 6.1 0.00013 44.1 -0.6 53 304-362 4-58 (667)
157 COG5152 Uncharacterized conser 40.3 12 0.00026 37.4 0.7 24 339-362 142-169 (259)
158 PF03158 DUF249: Multigene fam 39.9 41 0.0009 33.5 4.4 45 92-147 147-191 (192)
159 KOG2333 Uncharacterized conser 39.3 19 0.00042 40.6 2.2 59 267-328 75-142 (614)
160 KOG2202 U2 snRNP splicing fact 33.3 19 0.0004 37.5 0.9 27 300-326 149-175 (260)
161 COG5252 Uncharacterized conser 23.8 18 0.00039 37.1 -1.1 29 336-364 83-114 (299)
162 PF10650 zf-C3H1: Putative zin 21.9 58 0.0012 21.6 1.3 19 305-324 2-21 (23)
No 1
>KOG1595 consensus CCCH-type Zn-finger protein [General function prediction only]
Probab=100.00 E-value=7.6e-71 Score=591.55 Aligned_cols=412 Identities=45% Similarity=0.695 Sum_probs=329.0
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCcccccccccccCCccccCCCCchHHHHHhcCCHHHHHHHHHhcCCCccccCCCCCC
Q 006947 45 LLELAANNDVEGFKRSIVCDPSGVDEVGLWYGRQKGSKQMVNEQRTPLMVAATYGSIDIIRLILSESGADVNLSCGNDKS 124 (624)
Q Consensus 45 Lh~AA~~Gdle~Vk~LLe~~GadvN~~~l~~~~~~~~~~~D~~G~TPLhlAA~~G~~eiVklLL~~~GADVN~~~d~~G~ 124 (624)
|-+.++.+|++-+|.++++....++..++||.+..+.+.+..+.+|+|++|+.+|.++++.+++...-.++|..|..++.
T Consensus 15 ~~e~~~~~~~~~~k~~~~e~~~~~~~~~~~~r~~~~~k~~~~~qR~~~~v~~~~Gs~~~~~~i~~~~~~e~~~~C~~~~~ 94 (528)
T KOG1595|consen 15 LSEFEAPNDYAYLKEFRVEQPLFLQHKCLQHRPFVCFKWHFLNQRRRRPVARRDGSFNYSPDIYCTKYDEVTGICPDGDE 94 (528)
T ss_pred chhhccccHHHHHHHHHHhchhhhhhhhcccccchhhhhhhhccccccchhhhcCccccccceeecchhhccccCCCCcc
Confidence 33778889999999999988999999999999999999999999999999999999999999998767899998765554
Q ss_pred hHHHHHHhCCCCChHHHHHHHHHCCCCCCCcCCCCCcHH---HHHhcCCChhhHHHHHHHHHHCCCCCcccccccccccC
Q 006947 125 TALHCAASGGALNAVDVVKLLLAAGADPNFVDAKGHHPV---DVIVVPPKFQDVRLTLEELLATDGSVERNLRVSTTTSN 201 (624)
Q Consensus 125 TPLH~Aa~~G~~~~~eiVklLL~~GAD~n~~D~~G~TPL---hlAa~~g~~~~~~~lLe~LL~~gadv~~~~~l~~a~~~ 201 (624)
|+++.+...+.+|.+..|+.+++..+.+|..|+-+. |.|..+ ...+.+..++.|++.+. .
T Consensus 95 ---~C~~~g~s~~~~e~~~hL~~~k~~~~~tda~g~~~~~v~~~~~~~-~~~~~r~~~~~l~e~~~-~------------ 157 (528)
T KOG1595|consen 95 ---HCAVLGRSVGDTERTYHLRYYKTLPCVTDARGNCVKNVLHCAFAH-GPNDLRPPVEDLLELQG-G------------ 157 (528)
T ss_pred ---cchhcccccCCcceeEeccccccccCccccCCCcccCcccccccC-CccccccHHHHHHhccc-c------------
Confidence 888887777779999999999999999999998764 444442 23455666666666551 0
Q ss_pred CCCChhhhhhhcCCCCCCCCCCCCccccCCCCccccccccCCCCCCCCccccCccccccccccccccccCCCccCCCCcc
Q 006947 202 SNSPPLSPALENGSPTSASGSPMKSMSVDAPSFSVSEKKEYPIDPSLPDIKNSIYSTDEFRMYSFKVRPCSRAYSHDWTE 281 (624)
Q Consensus 202 ~g~TpL~lA~e~Gs~~~a~~s~~~~~~~~~a~~s~sekkeyp~D~slpdiknsiYssDeFrmy~fKt~pC~r~~sh~w~~ 281 (624)
.|........+. .....+|++|+++|||+ ++|++|+||||.|||++|.|.+|||||+
T Consensus 158 -----------~~~~~~e~~~~~-----------~~~~~~y~~Dp~~pdi~-~~ys~DeFrMy~fKir~C~R~~shDwte 214 (528)
T KOG1595|consen 158 -----------SGLPDDEPEVES-----------KLDVTEYPEDPSWPDIN-GIYSSDEFRMYSFKIRRCSRPRSHDWTE 214 (528)
T ss_pred -----------cCccCCCccccc-----------ccccccccCCCCccccc-ccccccceEEEeeeecccCCccCCCccc
Confidence 010000000000 01122999999999999 9999999999999999999999999999
Q ss_pred CCCCCCCcccccCCCCCCcccccCCCCCCCCcCCCCCccccccccceeecCCCccccccccCCCCCCCCccCCCCCCCCc
Q 006947 282 CPFVHPGENARRRDPRKFHYSCVPCPDFRKGACRRGDMCEYAHGVFECWLHPAQYRTRLCKDGTSCARRVCFFAHTPEEL 361 (624)
Q Consensus 282 Cpf~H~~~~~rRr~p~~~~y~~~~C~~~~~g~C~~gd~C~~aH~~~E~~~hP~~ykT~~C~~~~~C~~~~C~FaH~~~el 361 (624)
|||+|||||+||||||||+|++++||+|++|.|++||.|+||||+||+|+||.+|||++||++|+|+|++|||||.++||
T Consensus 215 CPf~HpgEkARRRDPRkyhYs~tpCPefrkG~C~rGD~CEyaHgvfEcwLHPa~YRT~~CkDg~~C~RrvCfFAH~~eqL 294 (528)
T KOG1595|consen 215 CPFAHPGEKARRRDPRKYHYSSTPCPEFRKGSCERGDSCEYAHGVFECWLHPARYRTRKCKDGGYCPRRVCFFAHSPEQL 294 (528)
T ss_pred CCccCCCcccccCCcccccccCccCcccccCCCCCCCccccccceehhhcCHHHhccccccCCCCCccceEeeecChHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcccCCCCCCCC-CCCCCCCCcchhhhhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCcccCC
Q 006947 362 RPLYVSTGSAVPS-PRSSTSGATAMDFAAALSLLPGSPSSVNVMSPSPFTPPMSPSANGISH--SNVAWPQPNVPALHLP 438 (624)
Q Consensus 362 r~~~~~~~~~~~s-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~sp~~~~~~~--~~~~~~~~~~~~~~~~ 438 (624)
|+++.++|+.+++ |+++++ .++. +.......+|++.+||+||++++.++ ..+.|.+.++.++..|
T Consensus 295 R~l~~s~~s~~~~sp~~s~~----sp~~--------~~~~~~~~s~~~~~~p~sp~~~~~~~~~~~~~s~~~~~~~~~~p 362 (528)
T KOG1595|consen 295 RPLPPSTGSDRPSSPSSSSA----SPMM--------ASLRSLPFSPSPGSPPLSPSANGVSSPIASGGSRSLNSNSPSSP 362 (528)
T ss_pred cccCCCCCCCCCCCcccccC----CCCc--------cccccCCCCCCCCCCCCCccccccccccccccccccCCCCCCCc
Confidence 9999999999997 665431 1111 11122334555689999999986544 5678999999999999
Q ss_pred CCccch-hhhhccccCCCCCccccCCCCCchHHHHHHhhhhccCCCCCCCCCcccCCCCCCCCCCchhhhhhccCCCCch
Q 006947 439 GSNLQS-SRLRSSLNARDMPVDDFNMLPDFDVQQQQLLNELSTLSQPTLSSSLNRSGRMKTLTPSNLDDLFSAESSSPRY 517 (624)
Q Consensus 439 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 517 (624)
+.+|+. |||++.++|||+ + +.-.++ +. ||+++|++++++
T Consensus 363 ~~~~~~~Srl~s~~~a~~i---~--~~~~~~---------------------~~-----------~l~~~f~s~~ss--- 402 (528)
T KOG1595|consen 363 AAPLRSFSRLSSSLSAADI---S--MSSPMN---------------------LG-----------NLSELFSSPDSS--- 402 (528)
T ss_pred ccccccccccccccccccc---c--cccccc---------------------cc-----------cchhhhcCcccc---
Confidence 999999 999999999998 2 222222 00 899999999873
Q ss_pred hhhhhhhhhcCccchhhhhhHHHHHHhhhcccccccC--CCCCCCC-Cccc
Q 006947 518 ADQALAAAVFSPTHKSAVLNQFQQQQQQSMLSPINTN--FSPKNVD-HPLL 565 (624)
Q Consensus 518 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~ 565 (624)
++.+|+|+. ++.+++|+.++ .....++ +++.
T Consensus 403 ----------------sl~~~~~~~-~~~~tsP~~~~~~~~~~~~e~s~~~ 436 (528)
T KOG1595|consen 403 ----------------SLNPQLQVL-SSAPTSPVFTDTASFGSSVESSPAM 436 (528)
T ss_pred ----------------ccchhhhhc-ccCCcCCcCCcccccccccccchhh
Confidence 233455544 36777888776 4434444 4444
No 2
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=99.94 E-value=3.7e-27 Score=224.33 Aligned_cols=158 Identities=28% Similarity=0.360 Sum_probs=145.8
Q ss_pred CCCCcccCc-cChHHHHHHHHcCCHHHHHHHHhcCCCCCcccccccccccCCccccCCCCchHHHHHhcCCHHHHHHHHH
Q 006947 31 MNHLTVETD-DAFASLLELAANNDVEGFKRSIVCDPSGVDEVGLWYGRQKGSKQMVNEQRTPLMVAATYGSIDIIRLILS 109 (624)
Q Consensus 31 ~~~ini~d~-dg~TpLh~AA~~Gdle~Vk~LLe~~GadvN~~~l~~~~~~~~~~~D~~G~TPLhlAA~~G~~eiVklLL~ 109 (624)
.+.++.+++ ||+||||+||..|+.++|+.|+.+.+..+|.. |..|+||||+||..|+.++|+.||.
T Consensus 27 ~kSL~~r~dqD~Rt~LHwa~S~g~~eiv~fLlsq~nv~~ddk-------------DdaGWtPlhia~s~g~~evVk~Ll~ 93 (226)
T KOG4412|consen 27 PKSLNARDDQDGRTPLHWACSFGHVEIVYFLLSQPNVKPDDK-------------DDAGWTPLHIAASNGNDEVVKELLN 93 (226)
T ss_pred hhhhhccccccCCceeeeeeecCchhHHHHHHhcCCCCCCCc-------------cccCCchhhhhhhcCcHHHHHHHhc
Confidence 355666666 99999999999999999999998678888776 7999999999999999999999999
Q ss_pred hcCCCccccCCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCCCcCCCCCcHHHHHhcCCChhhHHHHHHHHHHCCCCC
Q 006947 110 ESGADVNLSCGNDKSTALHCAASGGALNAVDVVKLLLAAGADPNFVDAKGHHPVDVIVVPPKFQDVRLTLEELLATDGSV 189 (624)
Q Consensus 110 ~~GADVN~~~d~~G~TPLH~Aa~~G~~~~~eiVklLL~~GAD~n~~D~~G~TPLhlAa~~g~~~~~~~lLe~LL~~gadv 189 (624)
+.|+|+|.. ++.|.|+||||+..|. .+|+++|++.||.++++|..|.||||-|+. .+..+++++|+..|+.+
T Consensus 94 r~~advna~-tn~G~T~LHyAagK~r---~eIaqlLle~ga~i~~kD~~~qtplHRAAa----vGklkvie~Li~~~a~~ 165 (226)
T KOG4412|consen 94 RSGADVNAT-TNGGQTCLHYAAGKGR---LEIAQLLLEKGALIRIKDKQGQTPLHRAAA----VGKLKVIEYLISQGAPL 165 (226)
T ss_pred CCCCCccee-cCCCcceehhhhcCCh---hhHHHHHHhcCCCCcccccccCchhHHHHh----ccchhhHHHHHhcCCCC
Confidence 989999999 9999999999999999 999999999999999999999999999999 66678999999999999
Q ss_pred cccccccccccCCCCChhhhhhhcCCC
Q 006947 190 ERNLRVSTTTSNSNSPPLSPALENGSP 216 (624)
Q Consensus 190 ~~~~~l~~a~~~~g~TpL~lA~e~Gs~ 216 (624)
+ ..+..|+||||.|+-.|.+
T Consensus 166 n-------~qDk~G~TpL~~al~e~~~ 185 (226)
T KOG4412|consen 166 N-------TQDKYGFTPLHHALAEGHP 185 (226)
T ss_pred C-------cccccCccHHHHHHhccCc
Confidence 8 8999999999999777754
No 3
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=99.91 E-value=2.4e-24 Score=205.19 Aligned_cols=149 Identities=23% Similarity=0.287 Sum_probs=134.4
Q ss_pred CCcccCccChHHHHHHHHcCCHHHHHHHHhcCCCCCcccccccccccCCccccCCCCchHHHHHhcCCHHHHHHHHHhcC
Q 006947 33 HLTVETDDAFASLLELAANNDVEGFKRSIVCDPSGVDEVGLWYGRQKGSKQMVNEQRTPLMVAATYGSIDIIRLILSESG 112 (624)
Q Consensus 33 ~ini~d~dg~TpLh~AA~~Gdle~Vk~LLe~~GadvN~~~l~~~~~~~~~~~D~~G~TPLhlAA~~G~~eiVklLL~~~G 112 (624)
.++-+|+.|+||||.||..|+.++|+.|+.+.|+|+|.. ...|+|+||+||..|..+|+++||++ |
T Consensus 64 ~~ddkDdaGWtPlhia~s~g~~evVk~Ll~r~~advna~-------------tn~G~T~LHyAagK~r~eIaqlLle~-g 129 (226)
T KOG4412|consen 64 KPDDKDDAGWTPLHIAASNGNDEVVKELLNRSGADVNAT-------------TNGGQTCLHYAAGKGRLEIAQLLLEK-G 129 (226)
T ss_pred CCCCccccCCchhhhhhhcCcHHHHHHHhcCCCCCccee-------------cCCCcceehhhhcCChhhHHHHHHhc-C
Confidence 344557789999999999999999999999669999988 58999999999999999999999999 8
Q ss_pred CCccccCCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCCCcCCCCCcHHHHHhcCCChhhHHHHHHHHHHCCCCCccc
Q 006947 113 ADVNLSCGNDKSTALHCAASGGALNAVDVVKLLLAAGADPNFVDAKGHHPVDVIVVPPKFQDVRLTLEELLATDGSVERN 192 (624)
Q Consensus 113 ADVN~~~d~~G~TPLH~Aa~~G~~~~~eiVklLL~~GAD~n~~D~~G~TPLhlAa~~g~~~~~~~lLe~LL~~gadv~~~ 192 (624)
+.|+++ |..|.||||.||..|. +++|++|+..||.+|..|..|+||||.|.. ++..+...+|+++|++.+
T Consensus 130 a~i~~k-D~~~qtplHRAAavGk---lkvie~Li~~~a~~n~qDk~G~TpL~~al~----e~~~d~a~lLV~~gAd~~-- 199 (226)
T KOG4412|consen 130 ALIRIK-DKQGQTPLHRAAAVGK---LKVIEYLISQGAPLNTQDKYGFTPLHHALA----EGHPDVAVLLVRAGADTD-- 199 (226)
T ss_pred CCCccc-ccccCchhHHHHhccc---hhhHHHHHhcCCCCCcccccCccHHHHHHh----ccCchHHHHHHHhcccee--
Confidence 999999 9999999999999999 999999999999999999999999999966 445666777888999988
Q ss_pred ccccccccCCCCChhhhhh
Q 006947 193 LRVSTTTSNSNSPPLSPAL 211 (624)
Q Consensus 193 ~~l~~a~~~~g~TpL~lA~ 211 (624)
..+++| |++.++.
T Consensus 200 -----~edke~-t~~~~a~ 212 (226)
T KOG4412|consen 200 -----REDKEG-TALRIAC 212 (226)
T ss_pred -----eccccC-chHHHHH
Confidence 667777 8887664
No 4
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.91 E-value=4.1e-24 Score=234.88 Aligned_cols=160 Identities=29% Similarity=0.334 Sum_probs=144.6
Q ss_pred CCCCcccCccChHHHHHHHHcCCHHHHHHHHhcCCCCCcccccccccccCCccccCCCCchHHHHHhcCCHHHHHHHHHh
Q 006947 31 MNHLTVETDDAFASLLELAANNDVEGFKRSIVCDPSGVDEVGLWYGRQKGSKQMVNEQRTPLMVAATYGSIDIIRLILSE 110 (624)
Q Consensus 31 ~~~ini~d~dg~TpLh~AA~~Gdle~Vk~LLe~~GadvN~~~l~~~~~~~~~~~D~~G~TPLhlAA~~G~~eiVklLL~~ 110 (624)
...++..|++|.++||+||.+|+++++++||+ +|++||..+ ..-+.|||||||++|++.+|.+||++
T Consensus 68 g~~v~~~D~~g~tlLHWAAiNNrl~v~r~li~-~gadvn~~g------------G~l~stPLHWAar~G~~~vv~lLlqh 134 (600)
T KOG0509|consen 68 GESVNNPDREGVTLLHWAAINNRLDVARYLIS-HGADVNAIG------------GVLGSTPLHWAARNGHISVVDLLLQH 134 (600)
T ss_pred CcCCCCCCcCCccceeHHHHcCcHHHHHHHHH-cCCCccccC------------CCCCCCcchHHHHcCcHHHHHHHHHc
Confidence 67788889999999999999999999999999 999999986 57789999999999999999999999
Q ss_pred cCCCccccCCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCCCcCCCCCcHHHHHhcCCChhhHHHHHHHHHHCCCCCc
Q 006947 111 SGADVNLSCGNDKSTALHCAASGGALNAVDVVKLLLAAGADPNFVDAKGHHPVDVIVVPPKFQDVRLTLEELLATDGSVE 190 (624)
Q Consensus 111 ~GADVN~~~d~~G~TPLH~Aa~~G~~~~~eiVklLL~~GAD~n~~D~~G~TPLhlAa~~g~~~~~~~lLe~LL~~gadv~ 190 (624)
|||++.+ |..|.|+||+||..|+ .-+|-+||.+|+|+|.+|.+|+||||+|+.+ +....+..|++.++.+.
T Consensus 135 -GAdpt~~-D~~G~~~lHla~~~~~---~~~vayll~~~~d~d~~D~~grTpLmwAayk----g~~~~v~~LL~f~a~~~ 205 (600)
T KOG0509|consen 135 -GADPTLK-DKQGLTPLHLAAQFGH---TALVAYLLSKGADIDLRDNNGRTPLMWAAYK----GFALFVRRLLKFGASLL 205 (600)
T ss_pred -CCCCcee-cCCCCcHHHHHHHhCc---hHHHHHHHHhcccCCCcCCCCCCHHHHHHHh----cccHHHHHHHHhccccc
Confidence 9999999 9999999999999999 9999999999999999999999999999984 44444888888888887
Q ss_pred ccccccccccCCCCChhhhhhhcCCCCC
Q 006947 191 RNLRVSTTTSNSNSPPLSPALENGSPTS 218 (624)
Q Consensus 191 ~~~~l~~a~~~~g~TpL~lA~e~Gs~~~ 218 (624)
...++.|.||||+|+..|....
T Consensus 206 ------~~d~~~g~TpLHwa~~~gN~~~ 227 (600)
T KOG0509|consen 206 ------LTDDNHGNTPLHWAVVGGNLTA 227 (600)
T ss_pred ------ccccccCCchHHHHHhcCCcce
Confidence 1334899999999999996543
No 5
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.88 E-value=7.9e-22 Score=196.72 Aligned_cols=154 Identities=14% Similarity=0.134 Sum_probs=127.6
Q ss_pred CCcccCccChHHHHHHHHcC--CHHHHHHHHhcCCCCCcccccccccccCCccccCCCCchHHHHHhc---CCHHHHHHH
Q 006947 33 HLTVETDDAFASLLELAANN--DVEGFKRSIVCDPSGVDEVGLWYGRQKGSKQMVNEQRTPLMVAATY---GSIDIIRLI 107 (624)
Q Consensus 33 ~ini~d~dg~TpLh~AA~~G--dle~Vk~LLe~~GadvN~~~l~~~~~~~~~~~D~~G~TPLhlAA~~---G~~eiVklL 107 (624)
.++..+..|.||||.|+..+ +.++++.||+ .|+++|..+ +..|.||||+|+.. ++.+++++|
T Consensus 43 ~~n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~-~gadvn~~~------------~~~g~TpLh~a~~~~~~~~~eiv~~L 109 (209)
T PHA02859 43 FVNDCNDLYETPIFSCLEKDKVNVEILKFLIE-NGADVNFKT------------RDNNLSALHHYLSFNKNVEPEILKIL 109 (209)
T ss_pred hhhccCccCCCHHHHHHHcCCCCHHHHHHHHH-CCCCCCccC------------CCCCCCHHHHHHHhCccccHHHHHHH
Confidence 35667888999999998854 8899999998 889988763 35789999998764 478999999
Q ss_pred HHhcCCCccccCCCCCChHHHHHHh--CCCCChHHHHHHHHHCCCCCCCcCCCCCcHHHHHhcCCChhhHHHHHHHHHHC
Q 006947 108 LSESGADVNLSCGNDKSTALHCAAS--GGALNAVDVVKLLLAAGADPNFVDAKGHHPVDVIVVPPKFQDVRLTLEELLAT 185 (624)
Q Consensus 108 L~~~GADVN~~~d~~G~TPLH~Aa~--~G~~~~~eiVklLL~~GAD~n~~D~~G~TPLhlAa~~g~~~~~~~lLe~LL~~ 185 (624)
+++ |+++|.+ +.+|.||||+|+. .++ .+++++|++.|+|++.+|..|.||||.++.. .+..+++++|++.
T Consensus 110 l~~-gadin~~-d~~G~TpLh~a~~~~~~~---~~iv~~Li~~gadin~~d~~g~t~Lh~~a~~---~~~~~iv~~Ll~~ 181 (209)
T PHA02859 110 IDS-GSSITEE-DEDGKNLLHMYMCNFNVR---INVIKLLIDSGVSFLNKDFDNNNILYSYILF---HSDKKIFDFLTSL 181 (209)
T ss_pred HHC-CCCCCCc-CCCCCCHHHHHHHhccCC---HHHHHHHHHcCCCcccccCCCCcHHHHHHHh---cCCHHHHHHHHHc
Confidence 988 8999998 8899999998876 356 8999999999999999999999999964431 3457888899999
Q ss_pred CCCCcccccccccccCCCCChhhhhhhcC
Q 006947 186 DGSVERNLRVSTTTSNSNSPPLSPALENG 214 (624)
Q Consensus 186 gadv~~~~~l~~a~~~~g~TpL~lA~e~G 214 (624)
|++++ ..+..|.|||++|..++
T Consensus 182 Gadi~-------~~d~~g~tpl~la~~~~ 203 (209)
T PHA02859 182 GIDIN-------ETNKSGYNCYDLIKFRN 203 (209)
T ss_pred CCCCC-------CCCCCCCCHHHHHhhhh
Confidence 99888 78888999999998776
No 6
>PHA02791 ankyrin-like protein; Provisional
Probab=99.87 E-value=1.7e-21 Score=203.21 Aligned_cols=113 Identities=22% Similarity=0.215 Sum_probs=69.1
Q ss_pred cccCccChHHHHHHHHcCCHHHHHHHHhcCCCCCcccccccccccCCccccCCCCchHHHHHhcCCHHHHHHHHHhcCCC
Q 006947 35 TVETDDAFASLLELAANNDVEGFKRSIVCDPSGVDEVGLWYGRQKGSKQMVNEQRTPLMVAATYGSIDIIRLILSESGAD 114 (624)
Q Consensus 35 ni~d~dg~TpLh~AA~~Gdle~Vk~LLe~~GadvN~~~l~~~~~~~~~~~D~~G~TPLhlAA~~G~~eiVklLL~~~GAD 114 (624)
+..|.+|.||||+|+..|+.++++.|++ .|++++.. +|.||||+|+..|+.++|++|++. |++
T Consensus 24 ~~~D~~G~TpLh~Aa~~g~~eiv~~Ll~-~ga~~n~~---------------d~~TpLh~Aa~~g~~eiV~lLL~~-Gad 86 (284)
T PHA02791 24 FKADVHGHSALYYAIADNNVRLVCTLLN-AGALKNLL---------------ENEFPLHQAATLEDTKIVKILLFS-GMD 86 (284)
T ss_pred CCCCCCCCcHHHHHHHcCCHHHHHHHHH-CcCCCcCC---------------CCCCHHHHHHHCCCHHHHHHHHHC-CCC
Confidence 4578889999999999999999999998 78877653 234555555555555555555544 455
Q ss_pred ccccCCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCCCcCCCCC-cHHHHHhc
Q 006947 115 VNLSCGNDKSTALHCAASGGALNAVDVVKLLLAAGADPNFVDAKGH-HPVDVIVV 168 (624)
Q Consensus 115 VN~~~d~~G~TPLH~Aa~~G~~~~~eiVklLL~~GAD~n~~D~~G~-TPLhlAa~ 168 (624)
+|.+ +..|+||||+|+..|+ .++|++|+++|++++.++..|+ ||||+|+.
T Consensus 87 vn~~-d~~G~TpLh~Aa~~g~---~eivk~Ll~~gadin~~~~~g~~TpL~~Aa~ 137 (284)
T PHA02791 87 DSQF-DDKGNTALYYAVDSGN---MQTVKLFVKKNWRLMFYGKTGWKTSFYHAVM 137 (284)
T ss_pred CCCC-CCCCCCHHHHHHHcCC---HHHHHHHHHCCCCcCccCCCCCcHHHHHHHH
Confidence 5544 4455555555555555 5555555555555554444442 45555544
No 7
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.87 E-value=6.1e-22 Score=217.88 Aligned_cols=158 Identities=29% Similarity=0.400 Sum_probs=142.9
Q ss_pred cCCCCcccCccChHHHHHHHHcCCHHHHHHHHhcCCCCCcccccccccccCCccccCCCCchHHHHHhcCCHHHHHHHHH
Q 006947 30 DMNHLTVETDDAFASLLELAANNDVEGFKRSIVCDPSGVDEVGLWYGRQKGSKQMVNEQRTPLMVAATYGSIDIIRLILS 109 (624)
Q Consensus 30 d~~~ini~d~dg~TpLh~AA~~Gdle~Vk~LLe~~GadvN~~~l~~~~~~~~~~~D~~G~TPLhlAA~~G~~eiVklLL~ 109 (624)
+.....++++--...++.|++.|+++.||.|++.+|.+++.. |.+|.|+|||||.+++++++++||+
T Consensus 33 ~~~~~~~e~d~~~~~~v~A~q~G~l~~v~~lve~~g~~v~~~-------------D~~g~tlLHWAAiNNrl~v~r~li~ 99 (600)
T KOG0509|consen 33 ESSNLSFEEDSSLDDIVKATQYGELETVKELVESEGESVNNP-------------DREGVTLLHWAAINNRLDVARYLIS 99 (600)
T ss_pred CCcccccccchhhhhhhhHhhcchHHHHHHHHhhcCcCCCCC-------------CcCCccceeHHHHcCcHHHHHHHHH
Confidence 333444456666788999999999999999999669998887 6899999999999999999999999
Q ss_pred hcCCCccccCCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCCCcCCCCCcHHHHHhcCCChhhHHHHHHHHHHCCCCC
Q 006947 110 ESGADVNLSCGNDKSTALHCAASGGALNAVDVVKLLLAAGADPNFVDAKGHHPVDVIVVPPKFQDVRLTLEELLATDGSV 189 (624)
Q Consensus 110 ~~GADVN~~~d~~G~TPLH~Aa~~G~~~~~eiVklLL~~GAD~n~~D~~G~TPLhlAa~~g~~~~~~~lLe~LL~~gadv 189 (624)
+ |||||...+.-+.||||+|+++|+ +.+|++||++|||++.+|.+|.++||+|+. .+...++-+|+.+++++
T Consensus 100 ~-gadvn~~gG~l~stPLHWAar~G~---~~vv~lLlqhGAdpt~~D~~G~~~lHla~~----~~~~~~vayll~~~~d~ 171 (600)
T KOG0509|consen 100 H-GADVNAIGGVLGSTPLHWAARNGH---ISVVDLLLQHGADPTLKDKQGLTPLHLAAQ----FGHTALVAYLLSKGADI 171 (600)
T ss_pred c-CCCccccCCCCCCCcchHHHHcCc---HHHHHHHHHcCCCCceecCCCCcHHHHHHH----hCchHHHHHHHHhcccC
Confidence 9 999999966889999999999999 999999999999999999999999999999 55667888889999999
Q ss_pred cccccccccccCCCCChhhhhhhcCC
Q 006947 190 ERNLRVSTTTSNSNSPPLSPALENGS 215 (624)
Q Consensus 190 ~~~~~l~~a~~~~g~TpL~lA~e~Gs 215 (624)
+ ..|+.|.|||++|+-+|.
T Consensus 172 d-------~~D~~grTpLmwAaykg~ 190 (600)
T KOG0509|consen 172 D-------LRDNNGRTPLMWAAYKGF 190 (600)
T ss_pred C-------CcCCCCCCHHHHHHHhcc
Confidence 8 899999999999999884
No 8
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.86 E-value=3.9e-21 Score=213.42 Aligned_cols=154 Identities=19% Similarity=0.200 Sum_probs=140.0
Q ss_pred cCCCCcccCcc-ChHHHHHHHHcCCHHHHHHHHhcCCCCCcccccccccccCCccccCCCCchHHHHHhcCCHHHHHHHH
Q 006947 30 DMNHLTVETDD-AFASLLELAANNDVEGFKRSIVCDPSGVDEVGLWYGRQKGSKQMVNEQRTPLMVAATYGSIDIIRLIL 108 (624)
Q Consensus 30 d~~~ini~d~d-g~TpLh~AA~~Gdle~Vk~LLe~~GadvN~~~l~~~~~~~~~~~D~~G~TPLhlAA~~G~~eiVklLL 108 (624)
...+++..+.+ |.||||.||..|+.++++.|++ .|+++|.. |..|.||||+|+..|+.++|++||
T Consensus 156 ~gadin~~~~~~g~tpLh~A~~~~~~~iv~~Ll~-~gad~n~~-------------d~~g~tpLh~A~~~~~~~iv~~Ll 221 (477)
T PHA02878 156 YGADINMKDRHKGNTALHYATENKDQRLTELLLS-YGANVNIP-------------DKTNNSPLHHAVKHYNKPIVHILL 221 (477)
T ss_pred cCCCCCccCCCCCCCHHHHHHhCCCHHHHHHHHH-CCCCCCCc-------------CCCCCCHHHHHHHhCCHHHHHHHH
Confidence 34567778888 9999999999999999999999 99999987 689999999999999999999999
Q ss_pred HhcCCCccccCCCCCChHHHHHHhC-CCCChHHHHHHHHHCCCCCCCcCC-CCCcHHHHHhcCCChhhHHHHHHHHHHCC
Q 006947 109 SESGADVNLSCGNDKSTALHCAASG-GALNAVDVVKLLLAAGADPNFVDA-KGHHPVDVIVVPPKFQDVRLTLEELLATD 186 (624)
Q Consensus 109 ~~~GADVN~~~d~~G~TPLH~Aa~~-G~~~~~eiVklLL~~GAD~n~~D~-~G~TPLhlAa~~g~~~~~~~lLe~LL~~g 186 (624)
+. |+++|.+ +..|.||||+|+.. ++ .+++++|+++|++++.++. .|.||||+|+. ..+++++|++.|
T Consensus 222 ~~-ga~in~~-d~~g~TpLh~A~~~~~~---~~iv~~Ll~~gadvn~~~~~~g~TpLh~A~~------~~~~v~~Ll~~g 290 (477)
T PHA02878 222 EN-GASTDAR-DKCGNTPLHISVGYCKD---YDILKLLLEHGVDVNAKSYILGLTALHSSIK------SERKLKLLLEYG 290 (477)
T ss_pred Hc-CCCCCCC-CCCCCCHHHHHHHhcCC---HHHHHHHHHcCCCCCccCCCCCCCHHHHHcc------CHHHHHHHHHCC
Confidence 98 9999999 99999999999975 67 9999999999999999986 89999999953 246799999999
Q ss_pred CCCcccccccccccCCCCChhhhhhhcCC
Q 006947 187 GSVERNLRVSTTTSNSNSPPLSPALENGS 215 (624)
Q Consensus 187 adv~~~~~l~~a~~~~g~TpL~lA~e~Gs 215 (624)
++++ ..+..|.|||++|++.+.
T Consensus 291 adin-------~~d~~g~TpL~~A~~~~~ 312 (477)
T PHA02878 291 ADIN-------SLNSYKLTPLSSAVKQYL 312 (477)
T ss_pred CCCC-------CcCCCCCCHHHHHHHHcC
Confidence 9998 788999999999998653
No 9
>PHA02946 ankyin-like protein; Provisional
Probab=99.85 E-value=5.1e-21 Score=211.48 Aligned_cols=158 Identities=16% Similarity=0.167 Sum_probs=127.5
Q ss_pred ccCCCCcccCccChHHHHHHHHcCCHHHHHHHHhcCCCCCcccccccccccCCccccCCCCchHHHHHhcC--CHHHHHH
Q 006947 29 VDMNHLTVETDDAFASLLELAANNDVEGFKRSIVCDPSGVDEVGLWYGRQKGSKQMVNEQRTPLMVAATYG--SIDIIRL 106 (624)
Q Consensus 29 ~d~~~ini~d~dg~TpLh~AA~~Gdle~Vk~LLe~~GadvN~~~l~~~~~~~~~~~D~~G~TPLhlAA~~G--~~eiVkl 106 (624)
....+++.++.+|.||||.||..|+.++|+.||+ .|+++|.. |.+|+||||+|+..+ ..+++++
T Consensus 60 ~~Gadvn~~d~~G~TpLh~Aa~~g~~eiv~lLL~-~GAdin~~-------------d~~g~TpLh~A~~~~~~~~e~v~l 125 (446)
T PHA02946 60 HRGYSPNETDDDGNYPLHIASKINNNRIVAMLLT-HGADPNAC-------------DKQHKTPLYYLSGTDDEVIERINL 125 (446)
T ss_pred HCcCCCCccCCCCCCHHHHHHHcCCHHHHHHHHH-CcCCCCCC-------------CCCCCCHHHHHHHcCCchHHHHHH
Confidence 3456788899999999999999999999999999 89999977 678888888887765 3788888
Q ss_pred HHHhcCCCccccCCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCCCcCCCCCcHHHHHhcCCChhhHHHHHHHHHHCC
Q 006947 107 ILSESGADVNLSCGNDKSTALHCAASGGALNAVDVVKLLLAAGADPNFVDAKGHHPVDVIVVPPKFQDVRLTLEELLATD 186 (624)
Q Consensus 107 LL~~~GADVN~~~d~~G~TPLH~Aa~~G~~~~~eiVklLL~~GAD~n~~D~~G~TPLhlAa~~g~~~~~~~lLe~LL~~g 186 (624)
||++ |+++|...+.+|.|||| ||..|+ .+++++|++.|++++.+|..|+||||+|+..++ ....++++|++.|
T Consensus 126 Ll~~-Gadin~~~d~~g~tpL~-aa~~~~---~~vv~~Ll~~gad~~~~d~~G~t~Lh~A~~~~~--~~~~~v~~Ll~~G 198 (446)
T PHA02946 126 LVQY-GAKINNSVDEEGCGPLL-ACTDPS---ERVFKKIMSIGFEARIVDKFGKNHIHRHLMSDN--PKASTISWMMKLG 198 (446)
T ss_pred HHHc-CCCcccccCCCCCcHHH-HHHCCC---hHHHHHHHhccccccccCCCCCCHHHHHHHhcC--CCHHHHHHHHHcC
Confidence 8877 88888543778888887 555677 788888888888888888888888888876332 2345778888888
Q ss_pred CCCcccccccccccCCCCChhhhhhhcC
Q 006947 187 GSVERNLRVSTTTSNSNSPPLSPALENG 214 (624)
Q Consensus 187 adv~~~~~l~~a~~~~g~TpL~lA~e~G 214 (624)
++++ ..+..|.||||+|+.+|
T Consensus 199 adin-------~~d~~G~TpLH~Aa~~~ 219 (446)
T PHA02946 199 ISPS-------KPDHDGNTPLHIVCSKT 219 (446)
T ss_pred CCCc-------ccCCCCCCHHHHHHHcC
Confidence 8887 67778888888888776
No 10
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.85 E-value=9e-21 Score=208.00 Aligned_cols=166 Identities=20% Similarity=0.292 Sum_probs=135.2
Q ss_pred CCCcccCccChHHHHHHHHcCCHHHHHHHHhcCCCCCcccc---------------------------------------
Q 006947 32 NHLTVETDDAFASLLELAANNDVEGFKRSIVCDPSGVDEVG--------------------------------------- 72 (624)
Q Consensus 32 ~~ini~d~dg~TpLh~AA~~Gdle~Vk~LLe~~GadvN~~~--------------------------------------- 72 (624)
..++..+.+|.||||.|+..|+.++|+.|++ .|+++|..+
T Consensus 26 ~~~n~~~~~~~tpL~~A~~~g~~~iv~~Ll~-~Ga~~n~~~~~~~t~L~~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~ 104 (434)
T PHA02874 26 NCINISVDETTTPLIDAIRSGDAKIVELFIK-HGADINHINTKIPHPLLTAIKIGAHDIIKLLIDNGVDTSILPIPCIEK 104 (434)
T ss_pred CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHH-CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcchhccCCH
Confidence 3345555666666666666666666666666 666665432
Q ss_pred ----cccccccCCccccCCCCchHHHHHhcCCHHHHHHHHHhcCCCccccCCCCCChHHHHHHhCCCCChHHHHHHHHHC
Q 006947 73 ----LWYGRQKGSKQMVNEQRTPLMVAATYGSIDIIRLILSESGADVNLSCGNDKSTALHCAASGGALNAVDVVKLLLAA 148 (624)
Q Consensus 73 ----l~~~~~~~~~~~D~~G~TPLhlAA~~G~~eiVklLL~~~GADVN~~~d~~G~TPLH~Aa~~G~~~~~eiVklLL~~ 148 (624)
.+...+.+.+..+..|.||||+|+..|+.++|++|+++ |+++|.+ +..|.||||+|+..|+ .+++++|++.
T Consensus 105 ~~i~~ll~~g~d~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~-gad~n~~-d~~g~tpLh~A~~~~~---~~iv~~Ll~~ 179 (434)
T PHA02874 105 DMIKTILDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEY-GADVNIE-DDNGCYPIHIAIKHNF---FDIIKLLLEK 179 (434)
T ss_pred HHHHHHHHCcCCCCCCCCCCccHHHHHHHCCCHHHHHHHHhC-CCCCCCc-CCCCCCHHHHHHHCCc---HHHHHHHHHC
Confidence 11223455667789999999999999999999999998 9999999 9999999999999999 9999999999
Q ss_pred CCCCCCcCCCCCcHHHHHhcCCChhhHHHHHHHHHHCCCCCcccccccccccCCCCChhhhhhhcC
Q 006947 149 GADPNFVDAKGHHPVDVIVVPPKFQDVRLTLEELLATDGSVERNLRVSTTTSNSNSPPLSPALENG 214 (624)
Q Consensus 149 GAD~n~~D~~G~TPLhlAa~~g~~~~~~~lLe~LL~~gadv~~~~~l~~a~~~~g~TpL~lA~e~G 214 (624)
|++++..|..|.||||+|+. .+..+++++|++.|+++. ..+..|.||||.|+..+
T Consensus 180 g~~~n~~~~~g~tpL~~A~~----~g~~~iv~~Ll~~g~~i~-------~~~~~g~TpL~~A~~~~ 234 (434)
T PHA02874 180 GAYANVKDNNGESPLHNAAE----YGDYACIKLLIDHGNHIM-------NKCKNGFTPLHNAIIHN 234 (434)
T ss_pred CCCCCCCCCCCCCHHHHHHH----cCCHHHHHHHHhCCCCCc-------CCCCCCCCHHHHHHHCC
Confidence 99999999999999999999 455778999999999887 56677888998888765
No 11
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.85 E-value=7.6e-21 Score=206.65 Aligned_cols=154 Identities=21% Similarity=0.239 Sum_probs=96.9
Q ss_pred CCCcccCccChHHHHHHHHcCCHHHHHHHHhcCCCCCcccccccccccCCccccCCCCchHHHHHhcCCHHHHHHHHHhc
Q 006947 32 NHLTVETDDAFASLLELAANNDVEGFKRSIVCDPSGVDEVGLWYGRQKGSKQMVNEQRTPLMVAATYGSIDIIRLILSES 111 (624)
Q Consensus 32 ~~ini~d~dg~TpLh~AA~~Gdle~Vk~LLe~~GadvN~~~l~~~~~~~~~~~D~~G~TPLhlAA~~G~~eiVklLL~~~ 111 (624)
.+++..+.+|.||||.|+..|+.++|+.|++ .|++++.. +.++.||||.|+..|+.++|++|++.
T Consensus 26 ~~~n~~~~~g~tpL~~A~~~~~~~~v~~Ll~-~ga~~~~~-------------~~~~~t~L~~A~~~g~~~~v~~Ll~~- 90 (413)
T PHA02875 26 INPNFEIYDGISPIKLAMKFRDSEAIKLLMK-HGAIPDVK-------------YPDIESELHDAVEEGDVKAVEELLDL- 90 (413)
T ss_pred CCCCccCCCCCCHHHHHHHcCCHHHHHHHHh-CCCCcccc-------------CCCcccHHHHHHHCCCHHHHHHHHHc-
Confidence 4566778889999999999999999999999 88887765 34455566666666666666666555
Q ss_pred CCCccccCCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCCCcCCCCCcHHHHHhcCCChhhHHHHHHHHHHCCCCCcc
Q 006947 112 GADVNLSCGNDKSTALHCAASGGALNAVDVVKLLLAAGADPNFVDAKGHHPVDVIVVPPKFQDVRLTLEELLATDGSVER 191 (624)
Q Consensus 112 GADVN~~~d~~G~TPLH~Aa~~G~~~~~eiVklLL~~GAD~n~~D~~G~TPLhlAa~~g~~~~~~~lLe~LL~~gadv~~ 191 (624)
|++++...+.+|.||||+|+..|+ .++|++|+++|+|++.++..|.||||+|+.. +..+++++|++.|++++
T Consensus 91 ~~~~~~~~~~~g~tpL~~A~~~~~---~~iv~~Ll~~gad~~~~~~~g~tpLh~A~~~----~~~~~v~~Ll~~g~~~~- 162 (413)
T PHA02875 91 GKFADDVFYKDGMTPLHLATILKK---LDIMKLLIARGADPDIPNTDKFSPLHLAVMM----GDIKGIELLIDHKACLD- 162 (413)
T ss_pred CCcccccccCCCCCHHHHHHHhCC---HHHHHHHHhCCCCCCCCCCCCCCHHHHHHHc----CCHHHHHHHHhcCCCCC-
Confidence 444433224455566666666555 5666666666666665555566666666552 23345555555555554
Q ss_pred cccccccccCCCCChhhhhhhcC
Q 006947 192 NLRVSTTTSNSNSPPLSPALENG 214 (624)
Q Consensus 192 ~~~l~~a~~~~g~TpL~lA~e~G 214 (624)
..+..|.||||+|+..|
T Consensus 163 ------~~d~~g~TpL~~A~~~g 179 (413)
T PHA02875 163 ------IEDCCGCTPLIIAMAKG 179 (413)
T ss_pred ------CCCCCCCCHHHHHHHcC
Confidence 44555556666555555
No 12
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.85 E-value=1.8e-20 Score=205.60 Aligned_cols=158 Identities=25% Similarity=0.390 Sum_probs=137.9
Q ss_pred HHHHHHHHcCCHHHHHHHHhcCCCCCcccc--------------------cccccccCCccccCCCCchHHHHHhcCCHH
Q 006947 43 ASLLELAANNDVEGFKRSIVCDPSGVDEVG--------------------LWYGRQKGSKQMVNEQRTPLMVAATYGSID 102 (624)
Q Consensus 43 TpLh~AA~~Gdle~Vk~LLe~~GadvN~~~--------------------l~~~~~~~~~~~D~~G~TPLhlAA~~G~~e 102 (624)
..|..|+..|+++.|+.|++..+..+|... +++..+.+.+..+..|.||||+|+..|+.+
T Consensus 3 ~~l~~ai~~gd~~~v~~ll~~~~~~~n~~~~~~~tpL~~A~~~g~~~iv~~Ll~~Ga~~n~~~~~~~t~L~~A~~~~~~~ 82 (434)
T PHA02874 3 QDLRMCIYSGDIEAIEKIIKNKGNCINISVDETTTPLIDAIRSGDAKIVELFIKHGADINHINTKIPHPLLTAIKIGAHD 82 (434)
T ss_pred HHHHHHHhcCCHHHHHHHHHcCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHH
Confidence 368999999999999999987777666432 455677777888899999999999999999
Q ss_pred HHHHHHHhc----------------------CCCccccCCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCCCcCCCCC
Q 006947 103 IIRLILSES----------------------GADVNLSCGNDKSTALHCAASGGALNAVDVVKLLLAAGADPNFVDAKGH 160 (624)
Q Consensus 103 iVklLL~~~----------------------GADVN~~~d~~G~TPLH~Aa~~G~~~~~eiVklLL~~GAD~n~~D~~G~ 160 (624)
+|++|++++ |++++.+ +..|.||||+|+..|+ .++|++|++.|++++.+|..|.
T Consensus 83 iv~~Ll~~g~~~~~~~~~~~~~~~i~~ll~~g~d~n~~-~~~g~T~Lh~A~~~~~---~~~v~~Ll~~gad~n~~d~~g~ 158 (434)
T PHA02874 83 IIKLLIDNGVDTSILPIPCIEKDMIKTILDCGIDVNIK-DAELKTFLHYAIKKGD---LESIKMLFEYGADVNIEDDNGC 158 (434)
T ss_pred HHHHHHHCCCCCCcchhccCCHHHHHHHHHCcCCCCCC-CCCCccHHHHHHHCCC---HHHHHHHHhCCCCCCCcCCCCC
Confidence 999998761 3456777 8899999999999999 9999999999999999999999
Q ss_pred cHHHHHhcCCChhhHHHHHHHHHHCCCCCcccccccccccCCCCChhhhhhhcCC
Q 006947 161 HPVDVIVVPPKFQDVRLTLEELLATDGSVERNLRVSTTTSNSNSPPLSPALENGS 215 (624)
Q Consensus 161 TPLhlAa~~g~~~~~~~lLe~LL~~gadv~~~~~l~~a~~~~g~TpL~lA~e~Gs 215 (624)
||||+|+. .+..+++++|++.|++++ ..+..|.||||+|++.|.
T Consensus 159 tpLh~A~~----~~~~~iv~~Ll~~g~~~n-------~~~~~g~tpL~~A~~~g~ 202 (434)
T PHA02874 159 YPIHIAIK----HNFFDIIKLLLEKGAYAN-------VKDNNGESPLHNAAEYGD 202 (434)
T ss_pred CHHHHHHH----CCcHHHHHHHHHCCCCCC-------CCCCCCCCHHHHHHHcCC
Confidence 99999998 455679999999999887 677889999999999984
No 13
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.85 E-value=1.4e-20 Score=204.59 Aligned_cols=155 Identities=23% Similarity=0.289 Sum_probs=134.2
Q ss_pred CCCcccCccChHHHHHHHHcCCHHHHHHHHhcCCCCCcccccccccccCCccccCCCCchHHHHHhcCCHHHHHHHHHhc
Q 006947 32 NHLTVETDDAFASLLELAANNDVEGFKRSIVCDPSGVDEVGLWYGRQKGSKQMVNEQRTPLMVAATYGSIDIIRLILSES 111 (624)
Q Consensus 32 ~~ini~d~dg~TpLh~AA~~Gdle~Vk~LLe~~GadvN~~~l~~~~~~~~~~~D~~G~TPLhlAA~~G~~eiVklLL~~~ 111 (624)
.+.+..+.++.|+||.|+..|+.++|+.|++ .|.+++... +.+|.||||+|+..|+.++|++|+++
T Consensus 59 a~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~~~------------~~~g~tpL~~A~~~~~~~iv~~Ll~~- 124 (413)
T PHA02875 59 AIPDVKYPDIESELHDAVEEGDVKAVEELLD-LGKFADDVF------------YKDGMTPLHLATILKKLDIMKLLIAR- 124 (413)
T ss_pred CCccccCCCcccHHHHHHHCCCHHHHHHHHH-cCCcccccc------------cCCCCCHHHHHHHhCCHHHHHHHHhC-
Confidence 3456667889999999999999999999999 777665432 57899999999999999999999998
Q ss_pred CCCccccCCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCCCcCCCCCcHHHHHhcCCChhhHHHHHHHHHHCCCCCcc
Q 006947 112 GADVNLSCGNDKSTALHCAASGGALNAVDVVKLLLAAGADPNFVDAKGHHPVDVIVVPPKFQDVRLTLEELLATDGSVER 191 (624)
Q Consensus 112 GADVN~~~d~~G~TPLH~Aa~~G~~~~~eiVklLL~~GAD~n~~D~~G~TPLhlAa~~g~~~~~~~lLe~LL~~gadv~~ 191 (624)
|+|++.. +.+|.||||+|+..|+ .++|++|+++|++++.+|..|.||||+|+.. +..+++++|++.|++++
T Consensus 125 gad~~~~-~~~g~tpLh~A~~~~~---~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~----g~~eiv~~Ll~~ga~~n- 195 (413)
T PHA02875 125 GADPDIP-NTDKFSPLHLAVMMGD---IKGIELLIDHKACLDIEDCCGCTPLIIAMAK----GDIAICKMLLDSGANID- 195 (413)
T ss_pred CCCCCCC-CCCCCCHHHHHHHcCC---HHHHHHHHhcCCCCCCCCCCCCCHHHHHHHc----CCHHHHHHHHhCCCCCC-
Confidence 9999998 8999999999999999 9999999999999999999999999999984 45678899999999988
Q ss_pred cccccccccCC-CCChhhhhhhcCC
Q 006947 192 NLRVSTTTSNS-NSPPLSPALENGS 215 (624)
Q Consensus 192 ~~~l~~a~~~~-g~TpL~lA~e~Gs 215 (624)
..+.. +.|++++|+..|.
T Consensus 196 ------~~~~~~~~t~l~~A~~~~~ 214 (413)
T PHA02875 196 ------YFGKNGCVAALCYAIENNK 214 (413)
T ss_pred ------cCCCCCCchHHHHHHHcCC
Confidence 33333 4577887777763
No 14
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.84 E-value=1.2e-20 Score=209.64 Aligned_cols=167 Identities=20% Similarity=0.195 Sum_probs=139.6
Q ss_pred ccCCCCcccCccChHHHHHHHHcCCHHHHHHHHhcCCCCCc---------------------------------------
Q 006947 29 VDMNHLTVETDDAFASLLELAANNDVEGFKRSIVCDPSGVD--------------------------------------- 69 (624)
Q Consensus 29 ~d~~~ini~d~dg~TpLh~AA~~Gdle~Vk~LLe~~GadvN--------------------------------------- 69 (624)
....+++..+.+|.||||.||..|+.++++.|++. +.+.+
T Consensus 58 ~~gadvn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~-~~~~~~~~~~~~l~~a~~~~~~ei~~~Ll~~~~~~~~~~~~~~~ 136 (477)
T PHA02878 58 TRGHNVNQPDHRDLTPLHIICKEPNKLGMKEMIRS-INKCSVFYTLVAIKDAFNNRNVEIFKIILTNRYKNIQTIDLVYI 136 (477)
T ss_pred HCCCCCCCCCCCCCCHHHHHHHCccHhHHHHHHHH-HhccccccchhhHHHHHHcCCHHHHHHHHhCcccCcccCcHHHH
Confidence 33457888899999999999999888888887762 21111
Q ss_pred ------------ccccccccccCCccccCC-CCchHHHHHhcCCHHHHHHHHHhcCCCccccCCCCCChHHHHHHhCCCC
Q 006947 70 ------------EVGLWYGRQKGSKQMVNE-QRTPLMVAATYGSIDIIRLILSESGADVNLSCGNDKSTALHCAASGGAL 136 (624)
Q Consensus 70 ------------~~~l~~~~~~~~~~~D~~-G~TPLhlAA~~G~~eiVklLL~~~GADVN~~~d~~G~TPLH~Aa~~G~~ 136 (624)
...++...+.+.+..+.+ |.||||+||..|+.++|++||+. |+++|.. +..|.||||+|+..|+
T Consensus 137 ~~~~~~~~~~~~iv~~Ll~~gadin~~~~~~g~tpLh~A~~~~~~~iv~~Ll~~-gad~n~~-d~~g~tpLh~A~~~~~- 213 (477)
T PHA02878 137 DKKSKDDIIEAEITKLLLSYGADINMKDRHKGNTALHYATENKDQRLTELLLSY-GANVNIP-DKTNNSPLHHAVKHYN- 213 (477)
T ss_pred hhccchhhHHHHHHHHHHHcCCCCCccCCCCCCCHHHHHHhCCCHHHHHHHHHC-CCCCCCc-CCCCCCHHHHHHHhCC-
Confidence 112344556777778888 99999999999999999999998 9999998 9999999999999999
Q ss_pred ChHHHHHHHHHCCCCCCCcCCCCCcHHHHHhcCCChhhHHHHHHHHHHCCCCCcccccccccccC-CCCChhhhhh
Q 006947 137 NAVDVVKLLLAAGADPNFVDAKGHHPVDVIVVPPKFQDVRLTLEELLATDGSVERNLRVSTTTSN-SNSPPLSPAL 211 (624)
Q Consensus 137 ~~~eiVklLL~~GAD~n~~D~~G~TPLhlAa~~g~~~~~~~lLe~LL~~gadv~~~~~l~~a~~~-~g~TpL~lA~ 211 (624)
.++|++|++.|++++.+|..|+||||+|+.. ....+++++|+++|++++ ..+. .|.||||+|.
T Consensus 214 --~~iv~~Ll~~ga~in~~d~~g~TpLh~A~~~---~~~~~iv~~Ll~~gadvn-------~~~~~~g~TpLh~A~ 277 (477)
T PHA02878 214 --KPIVHILLENGASTDARDKCGNTPLHISVGY---CKDYDILKLLLEHGVDVN-------AKSYILGLTALHSSI 277 (477)
T ss_pred --HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHh---cCCHHHHHHHHHcCCCCC-------ccCCCCCCCHHHHHc
Confidence 9999999999999999999999999999963 235689999999999998 4443 6899999883
No 15
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.83 E-value=5.3e-20 Score=183.60 Aligned_cols=148 Identities=20% Similarity=0.271 Sum_probs=124.5
Q ss_pred CccChHHHHHHHHcCCHHHHHHHHhcCCCCCcccccccccccCCccccCCCCchHHHHHhcC--CHHHHHHHHHhcCCCc
Q 006947 38 TDDAFASLLELAANNDVEGFKRSIVCDPSGVDEVGLWYGRQKGSKQMVNEQRTPLMVAATYG--SIDIIRLILSESGADV 115 (624)
Q Consensus 38 d~dg~TpLh~AA~~Gdle~Vk~LLe~~GadvN~~~l~~~~~~~~~~~D~~G~TPLhlAA~~G--~~eiVklLL~~~GADV 115 (624)
.+.+.+||+.|+..|+++.|+.|++ . +|.. +..|.||||+|+..+ +.++|++||++ |+++
T Consensus 18 ~~~~~~pL~~A~~~~~~~~vk~Li~-~---~n~~-------------~~~g~TpLh~a~~~~~~~~eiv~~Ll~~-gadv 79 (209)
T PHA02859 18 FYRYCNPLFYYVEKDDIEGVKKWIK-F---VNDC-------------NDLYETPIFSCLEKDKVNVEILKFLIEN-GADV 79 (209)
T ss_pred hhccCcHHHHHHHhCcHHHHHHHHH-h---hhcc-------------CccCCCHHHHHHHcCCCCHHHHHHHHHC-CCCC
Confidence 4567999999999999999999997 3 4444 678999999999854 89999999999 9999
Q ss_pred cccCCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCCCcCCCCCcHHHHHhcCCChhhHHHHHHHHHHCCCCCcccccc
Q 006947 116 NLSCGNDKSTALHCAASGGALNAVDVVKLLLAAGADPNFVDAKGHHPVDVIVVPPKFQDVRLTLEELLATDGSVERNLRV 195 (624)
Q Consensus 116 N~~~d~~G~TPLH~Aa~~G~~~~~eiVklLL~~GAD~n~~D~~G~TPLhlAa~~g~~~~~~~lLe~LL~~gadv~~~~~l 195 (624)
|.+.+..|.||||+|+..++....+++++|+++|+|+|.+|..|.||||+|+.. ..+..+++++|++.|++++
T Consensus 80 n~~~~~~g~TpLh~a~~~~~~~~~eiv~~Ll~~gadin~~d~~G~TpLh~a~~~--~~~~~~iv~~Li~~gadin----- 152 (209)
T PHA02859 80 NFKTRDNNLSALHHYLSFNKNVEPEILKILIDSGSSITEEDEDGKNLLHMYMCN--FNVRINVIKLLIDSGVSFL----- 152 (209)
T ss_pred CccCCCCCCCHHHHHHHhCccccHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHh--ccCCHHHHHHHHHcCCCcc-----
Confidence 998335899999998764311128999999999999999999999999999852 1345789999999999998
Q ss_pred cccccCCCCChhhhhhh
Q 006947 196 STTTSNSNSPPLSPALE 212 (624)
Q Consensus 196 ~~a~~~~g~TpL~lA~e 212 (624)
..+..|.||||.++.
T Consensus 153 --~~d~~g~t~Lh~~a~ 167 (209)
T PHA02859 153 --NKDFDNNNILYSYIL 167 (209)
T ss_pred --cccCCCCcHHHHHHH
Confidence 778899999996543
No 16
>PHA02791 ankyrin-like protein; Provisional
Probab=99.83 E-value=5.8e-20 Score=191.73 Aligned_cols=160 Identities=14% Similarity=0.076 Sum_probs=131.8
Q ss_pred ccChHHHHHHHHcCCHHHHHHHHhcCCCCCcccccccccccCCccccCCCCchHHHHHhcCCHHHHHHHHHhcCCCcccc
Q 006947 39 DDAFASLLELAANNDVEGFKRSIVCDPSGVDEVGLWYGRQKGSKQMVNEQRTPLMVAATYGSIDIIRLILSESGADVNLS 118 (624)
Q Consensus 39 ~dg~TpLh~AA~~Gdle~Vk~LLe~~GadvN~~~l~~~~~~~~~~~D~~G~TPLhlAA~~G~~eiVklLL~~~GADVN~~ 118 (624)
.++.||||.|+..|+.++|+.|++ .|+++|.. |.+|+||||+|+..|+.++|++|+++ |+++|.+
T Consensus 59 ~d~~TpLh~Aa~~g~~eiV~lLL~-~Gadvn~~-------------d~~G~TpLh~Aa~~g~~eivk~Ll~~-gadin~~ 123 (284)
T PHA02791 59 LENEFPLHQAATLEDTKIVKILLF-SGMDDSQF-------------DDKGNTALYYAVDSGNMQTVKLFVKK-NWRLMFY 123 (284)
T ss_pred CCCCCHHHHHHHCCCHHHHHHHHH-CCCCCCCC-------------CCCCCCHHHHHHHcCCHHHHHHHHHC-CCCcCcc
Confidence 357899999999999999999998 89999877 68899999999999999999999988 8999988
Q ss_pred CCCCCC-hHHHHHHhCCCCChHHHHHHHHHCCCCCCCcC-CCCCcHHHHHhcCCChhhHHHHHHHHHHCCCCCcc-----
Q 006947 119 CGNDKS-TALHCAASGGALNAVDVVKLLLAAGADPNFVD-AKGHHPVDVIVVPPKFQDVRLTLEELLATDGSVER----- 191 (624)
Q Consensus 119 ~d~~G~-TPLH~Aa~~G~~~~~eiVklLL~~GAD~n~~D-~~G~TPLhlAa~~g~~~~~~~lLe~LL~~gadv~~----- 191 (624)
+..|+ ||||+|+..|+ .++|++||+.|++. .| ..|.||||+|+. .+..+++++|+++|++++.
T Consensus 124 -~~~g~~TpL~~Aa~~g~---~eivk~LL~~~~~~--~d~~~g~TpLh~Aa~----~g~~eiv~lLL~~gAd~n~~d~~g 193 (284)
T PHA02791 124 -GKTGWKTSFYHAVMLND---VSIVSYFLSEIPST--FDLAILLSCIHITIK----NGHVDMMILLLDYMTSTNTNNSLL 193 (284)
T ss_pred -CCCCCcHHHHHHHHcCC---HHHHHHHHhcCCcc--cccccCccHHHHHHH----cCCHHHHHHHHHCCCCCCcccCCC
Confidence 77774 89999999999 99999999987653 23 258999999999 5567889999999998772
Q ss_pred ccc-ccccccCCCCChhhhhhhcCCCCCCCCCC
Q 006947 192 NLR-VSTTTSNSNSPPLSPALENGSPTSASGSP 223 (624)
Q Consensus 192 ~~~-l~~a~~~~g~TpL~lA~e~Gs~~~a~~s~ 223 (624)
.++ ++.+........+.+++..|++..+++..
T Consensus 194 ~t~~L~~Aa~~~~~e~v~lLl~~Ga~in~~~~~ 226 (284)
T PHA02791 194 FIPDIKLAIDNKDLEMLQALFKYDINIYSVNLE 226 (284)
T ss_pred CChHHHHHHHcCCHHHHHHHHHCCCCCccCccc
Confidence 122 45555555556667778899888777653
No 17
>PHA03095 ankyrin-like protein; Provisional
Probab=99.83 E-value=6.4e-20 Score=201.99 Aligned_cols=152 Identities=21% Similarity=0.262 Sum_probs=78.3
Q ss_pred CCCCcccCccChHHHHHHHHcC-CHHHHHHHHhcCCCCCcccc----------------------cccccccCCccccCC
Q 006947 31 MNHLTVETDDAFASLLELAANN-DVEGFKRSIVCDPSGVDEVG----------------------LWYGRQKGSKQMVNE 87 (624)
Q Consensus 31 ~~~ini~d~dg~TpLh~AA~~G-dle~Vk~LLe~~GadvN~~~----------------------l~~~~~~~~~~~D~~ 87 (624)
..+++..+..|.||||.|+..| ..++++.|++ .|+++|..+ +++..+.+.+..|..
T Consensus 73 Gadin~~~~~g~TpLh~A~~~~~~~~iv~lLl~-~ga~in~~~~~g~tpLh~a~~~~~~~~~iv~~Ll~~gad~~~~d~~ 151 (471)
T PHA03095 73 GADVNAPERCGFTPLHLYLYNATTLDVIKLLIK-AGADVNAKDKVGRTPLHVYLSGFNINPKVIRLLLRKGADVNALDLY 151 (471)
T ss_pred CCCCCCCCCCCCCHHHHHHHcCCcHHHHHHHHH-cCCCCCCCCCCCCCHHHHHhhCCcCCHHHHHHHHHcCCCCCccCCC
Confidence 3455666666666666666666 3666666666 666655433 122333444555566
Q ss_pred CCchHHHHHhcC--CHHHHHHHHHhcCCCccccCCCCCChHHHHHHhC--CCCChHHHHHHHHHCCCCCCCcCCCCCcHH
Q 006947 88 QRTPLMVAATYG--SIDIIRLILSESGADVNLSCGNDKSTALHCAASG--GALNAVDVVKLLLAAGADPNFVDAKGHHPV 163 (624)
Q Consensus 88 G~TPLhlAA~~G--~~eiVklLL~~~GADVN~~~d~~G~TPLH~Aa~~--G~~~~~eiVklLL~~GAD~n~~D~~G~TPL 163 (624)
|.||||+|+..+ +.++|++|+++ |++++.. +..|.||||+|+.. +. .+++++|++.|++++.+|..|+|||
T Consensus 152 g~tpL~~a~~~~~~~~~iv~~Ll~~-g~~~~~~-d~~g~t~Lh~~~~~~~~~---~~i~~~Ll~~g~~~~~~d~~g~tpL 226 (471)
T PHA03095 152 GMTPLAVLLKSRNANVELLRLLIDA-GADVYAV-DDRFRSLLHHHLQSFKPR---ARIVRELIRAGCDPAATDMLGNTPL 226 (471)
T ss_pred CCCHHHHHHHcCCCCHHHHHHHHHc-CCCCccc-CCCCCCHHHHHHHHCCCc---HHHHHHHHHcCCCCcccCCCCCCHH
Confidence 666666655543 45555555555 5555555 55555555555443 22 4455555555555555555555555
Q ss_pred HHHhcCCChhhHHHHHHHHHHCCCCCc
Q 006947 164 DVIVVPPKFQDVRLTLEELLATDGSVE 190 (624)
Q Consensus 164 hlAa~~g~~~~~~~lLe~LL~~gadv~ 190 (624)
|+|+..|+. ...+++.|++.|++++
T Consensus 227 h~Aa~~~~~--~~~~v~~ll~~g~din 251 (471)
T PHA03095 227 HSMATGSSC--KRSLVLPLLIAGISIN 251 (471)
T ss_pred HHHHhcCCc--hHHHHHHHHHcCCCCC
Confidence 554443221 1233444444444444
No 18
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.83 E-value=5.2e-20 Score=203.37 Aligned_cols=117 Identities=24% Similarity=0.322 Sum_probs=72.7
Q ss_pred cCCCCchHHHHHhcC--CHHHHHHHHHhcCCCccccCCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCCCcCCCC---
Q 006947 85 VNEQRTPLMVAATYG--SIDIIRLILSESGADVNLSCGNDKSTALHCAASGGALNAVDVVKLLLAAGADPNFVDAKG--- 159 (624)
Q Consensus 85 D~~G~TPLhlAA~~G--~~eiVklLL~~~GADVN~~~d~~G~TPLH~Aa~~G~~~~~eiVklLL~~GAD~n~~D~~G--- 159 (624)
+..|.||||+|+..| +.+++++|+++ |+++|.+ +..|.||||+|+..|+ .+++++|+++|++++..+..|
T Consensus 138 ~~~g~t~L~~A~~~~~~~~~iv~~Ll~~-g~din~~-d~~g~tpL~~A~~~~~---~~iv~~Ll~~ga~~~~~~~~~~~~ 212 (480)
T PHA03100 138 NSDGENLLHLYLESNKIDLKILKLLIDK-GVDINAK-NRYGYTPLHIAVEKGN---IDVIKFLLDNGADINAGDIETLLF 212 (480)
T ss_pred CCCCCcHHHHHHHcCCChHHHHHHHHHC-CCCcccc-cCCCCCHHHHHHHhCC---HHHHHHHHHcCCCccCCCCCCCcH
Confidence 455666666666666 56666666655 5666655 5566666666666665 666666666666666665555
Q ss_pred ---CcHHHHHhcCCChhhHHHHHHHHHHCCCCCcccccccccccCCCCChhhhhhhcCC
Q 006947 160 ---HHPVDVIVVPPKFQDVRLTLEELLATDGSVERNLRVSTTTSNSNSPPLSPALENGS 215 (624)
Q Consensus 160 ---~TPLhlAa~~g~~~~~~~lLe~LL~~gadv~~~~~l~~a~~~~g~TpL~lA~e~Gs 215 (624)
.||||+|+..++ ...+++++|++.|++++ ..+..|.||||+|+..|.
T Consensus 213 ~~~~t~l~~a~~~~~--~~~~iv~~Ll~~g~din-------~~d~~g~TpL~~A~~~~~ 262 (480)
T PHA03100 213 TIFETPLHIAACYNE--ITLEVVNYLLSYGVPIN-------IKDVYGFTPLHYAVYNNN 262 (480)
T ss_pred HHHHhHHHHHHHhCc--CcHHHHHHHHHcCCCCC-------CCCCCCCCHHHHHHHcCC
Confidence 566666665221 11556666666666665 566788888888888763
No 19
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.83 E-value=1.6e-20 Score=199.66 Aligned_cols=151 Identities=24% Similarity=0.314 Sum_probs=138.4
Q ss_pred CcccCccChHHHHHHHHcCCHHHHHHHHhcCCCCCcccccccccccCCccccCCCCchHHHHHhcCCHHHHHHHHHhcCC
Q 006947 34 LTVETDDAFASLLELAANNDVEGFKRSIVCDPSGVDEVGLWYGRQKGSKQMVNEQRTPLMVAATYGSIDIIRLILSESGA 113 (624)
Q Consensus 34 ini~d~dg~TpLh~AA~~Gdle~Vk~LLe~~GadvN~~~l~~~~~~~~~~~D~~G~TPLhlAA~~G~~eiVklLL~~~GA 113 (624)
++-++.+|.+||..|+..|++++||.||+ +|++||.. .....|||--||.-|+++|||+|+++ |+
T Consensus 77 FDge~IegappLWaAsaAGHl~vVk~L~~-~ga~VN~t-------------T~TNStPLraACfDG~leivKyLvE~-ga 141 (615)
T KOG0508|consen 77 FDGETIEGAPPLWAASAAGHLEVVKLLLR-RGASVNDT-------------TRTNSTPLRAACFDGHLEIVKYLVEH-GA 141 (615)
T ss_pred eCCcccCCCchhhHHhccCcHHHHHHHHH-hcCccccc-------------cccCCccHHHHHhcchhHHHHHHHHc-CC
Confidence 33456689999999999999999999999 88999976 46667999999999999999999988 99
Q ss_pred CccccCCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCCCcCCCCCcHHHHHhcCCChhhHHHHHHHHHHCCCCCcccc
Q 006947 114 DVNLSCGNDKSTALHCAASGGALNAVDVVKLLLAAGADPNFVDAKGHHPVDVIVVPPKFQDVRLTLEELLATDGSVERNL 193 (624)
Q Consensus 114 DVN~~~d~~G~TPLH~Aa~~G~~~~~eiVklLL~~GAD~n~~D~~G~TPLhlAa~~g~~~~~~~lLe~LL~~gadv~~~~ 193 (624)
|+++. +..|.|.||+||..|| ++|+++|++.|||+|.++..|+|+||.++. .+..+++++|+++|+.+.
T Consensus 142 d~~Ia-nrhGhTcLmIa~ykGh---~~I~qyLle~gADvn~ks~kGNTALH~caE----sG~vdivq~Ll~~ga~i~--- 210 (615)
T KOG0508|consen 142 DPEIA-NRHGHTCLMIACYKGH---VDIAQYLLEQGADVNAKSYKGNTALHDCAE----SGSVDIVQLLLKHGAKID--- 210 (615)
T ss_pred CCccc-ccCCCeeEEeeeccCc---hHHHHHHHHhCCCcchhcccCchHHHhhhh----cccHHHHHHHHhCCceee---
Confidence 99999 9999999999999999 999999999999999999999999999998 566789999999998886
Q ss_pred cccccccCCCCChhhhhhhcCC
Q 006947 194 RVSTTTSNSNSPPLSPALENGS 215 (624)
Q Consensus 194 ~l~~a~~~~g~TpL~lA~e~Gs 215 (624)
.+..|-|||..|...|.
T Consensus 211 -----~d~~GmtPL~~Aa~tG~ 227 (615)
T KOG0508|consen 211 -----VDGHGMTPLLLAAVTGH 227 (615)
T ss_pred -----ecCCCCchHHHHhhhcc
Confidence 56679999999999995
No 20
>PHA03095 ankyrin-like protein; Provisional
Probab=99.82 E-value=9e-20 Score=200.83 Aligned_cols=160 Identities=21% Similarity=0.191 Sum_probs=142.4
Q ss_pred ccccCCCCcccCccChHHHHHHHHcC---CHHHHHHHHhcCCCCCcccccccccccCCccccCCCCchHHHHHhcC-CHH
Q 006947 27 TNVDMNHLTVETDDAFASLLELAANN---DVEGFKRSIVCDPSGVDEVGLWYGRQKGSKQMVNEQRTPLMVAATYG-SID 102 (624)
Q Consensus 27 ~~~d~~~ini~d~dg~TpLh~AA~~G---dle~Vk~LLe~~GadvN~~~l~~~~~~~~~~~D~~G~TPLhlAA~~G-~~e 102 (624)
..+...+++..+..|.||||.|+..+ +.++++.|++ .|+++|.. |..|.||||+|+..| +.+
T Consensus 33 Ll~~ga~vn~~~~~g~t~Lh~a~~~~~~~~~~iv~~Ll~-~Gadin~~-------------~~~g~TpLh~A~~~~~~~~ 98 (471)
T PHA03095 33 LLAAGADVNFRGEYGKTPLHLYLHYSSEKVKDIVRLLLE-AGADVNAP-------------ERCGFTPLHLYLYNATTLD 98 (471)
T ss_pred HHHcCCCcccCCCCCCCHHHHHHHhcCCChHHHHHHHHH-CCCCCCCC-------------CCCCCCHHHHHHHcCCcHH
Confidence 34455678889999999999999999 9999999999 99999987 579999999999999 599
Q ss_pred HHHHHHHhcCCCccccCCCCCChHHHHHH--hCCCCChHHHHHHHHHCCCCCCCcCCCCCcHHHHHhcCCChhhHHHHHH
Q 006947 103 IIRLILSESGADVNLSCGNDKSTALHCAA--SGGALNAVDVVKLLLAAGADPNFVDAKGHHPVDVIVVPPKFQDVRLTLE 180 (624)
Q Consensus 103 iVklLL~~~GADVN~~~d~~G~TPLH~Aa--~~G~~~~~eiVklLL~~GAD~n~~D~~G~TPLhlAa~~g~~~~~~~lLe 180 (624)
++++|+++ |+++|.+ +..|.||||+|+ ..++ .+++++|++.|+|++.+|..|.||||+|+..+ ....++++
T Consensus 99 iv~lLl~~-ga~in~~-~~~g~tpLh~a~~~~~~~---~~iv~~Ll~~gad~~~~d~~g~tpL~~a~~~~--~~~~~iv~ 171 (471)
T PHA03095 99 VIKLLIKA-GADVNAK-DKVGRTPLHVYLSGFNIN---PKVIRLLLRKGADVNALDLYGMTPLAVLLKSR--NANVELLR 171 (471)
T ss_pred HHHHHHHc-CCCCCCC-CCCCCCHHHHHhhCCcCC---HHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC--CCCHHHHH
Confidence 99999998 9999999 999999999999 4456 89999999999999999999999999998754 44578999
Q ss_pred HHHHCCCCCcccccccccccCCCCChhhhhhhcC
Q 006947 181 ELLATDGSVERNLRVSTTTSNSNSPPLSPALENG 214 (624)
Q Consensus 181 ~LL~~gadv~~~~~l~~a~~~~g~TpL~lA~e~G 214 (624)
+|++.|+++. ..+..|.|+||.++...
T Consensus 172 ~Ll~~g~~~~-------~~d~~g~t~Lh~~~~~~ 198 (471)
T PHA03095 172 LLIDAGADVY-------AVDDRFRSLLHHHLQSF 198 (471)
T ss_pred HHHHcCCCCc-------ccCCCCCCHHHHHHHHC
Confidence 9999999887 45788999999988764
No 21
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.82 E-value=5.9e-20 Score=211.96 Aligned_cols=154 Identities=15% Similarity=0.166 Sum_probs=134.6
Q ss_pred CCCccc-CccChHHHHHHHH--cCCHHHHHHHHhcCCCCCcccccccccccCCccccCCCCchHHHHHhcCC--HHHHHH
Q 006947 32 NHLTVE-TDDAFASLLELAA--NNDVEGFKRSIVCDPSGVDEVGLWYGRQKGSKQMVNEQRTPLMVAATYGS--IDIIRL 106 (624)
Q Consensus 32 ~~ini~-d~dg~TpLh~AA~--~Gdle~Vk~LLe~~GadvN~~~l~~~~~~~~~~~D~~G~TPLhlAA~~G~--~eiVkl 106 (624)
.+++.. +..|.||||.|+. .++.++|+.|++ .|+++|.. |.+|.||||+|+..|+ .++|++
T Consensus 167 ADIN~~~d~~G~TpLH~A~~n~~~~~eIVklLLe-~GADVN~k-------------D~~G~TPLH~Aa~~g~~~~eIVkl 232 (764)
T PHA02716 167 VNLNYVCKKTGYGILHAYLGNMYVDIDILEWLCN-NGVNVNLQ-------------NNHLITPLHTYLITGNVCASVIKK 232 (764)
T ss_pred CCcccccCCCCCcHHHHHHHhccCCHHHHHHHHH-cCCCCCCC-------------CCCCCCHHHHHHHcCCCCHHHHHH
Confidence 567777 8899999999875 468999999999 99999987 6899999999999995 599999
Q ss_pred HHHhcCCCccccCCCCCChHHHHHH-------------------------------------hCCCCChHHHHHHHHHCC
Q 006947 107 ILSESGADVNLSCGNDKSTALHCAA-------------------------------------SGGALNAVDVVKLLLAAG 149 (624)
Q Consensus 107 LL~~~GADVN~~~d~~G~TPLH~Aa-------------------------------------~~G~~~~~eiVklLL~~G 149 (624)
||++ |||||.+ +..|+||||+|+ ..|+ .++|++||+.|
T Consensus 233 LLe~-GADVN~k-D~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~~~i~AA~~g~---leiVklLLe~G 307 (764)
T PHA02716 233 IIEL-GGDMDMK-CVNGMSPIMTYIINIDNINPEITNIYIESLDGNKVKNIPMILHSYITLARNID---ISVVYSFLQPG 307 (764)
T ss_pred HHHc-CCCCCCC-CCCCCCHHHHHHHhhhccCHHHHHHHHHhccccccccchhhhHHHHHHHHcCC---HHHHHHHHhCC
Confidence 9998 9999999 999999999763 3456 89999999999
Q ss_pred CCCCCcCCCCCcHHHHHhcCCChhhHHHHHHHHHHCCCCCcccccccccccCCCCChhhhhhhc
Q 006947 150 ADPNFVDAKGHHPVDVIVVPPKFQDVRLTLEELLATDGSVERNLRVSTTTSNSNSPPLSPALEN 213 (624)
Q Consensus 150 AD~n~~D~~G~TPLhlAa~~g~~~~~~~lLe~LL~~gadv~~~~~l~~a~~~~g~TpL~lA~e~ 213 (624)
++++.+|..|+||||+|+..+ .+..+++++|++.|++++ ..+..|.||||+|+..
T Consensus 308 AdIN~kD~~G~TPLH~Aaa~~--~~~~eIVklLLe~GADIN-------~kD~~G~TPLH~A~~~ 362 (764)
T PHA02716 308 VKLHYKDSAGRTCLHQYILRH--NISTDIIKLLHEYGNDLN-------EPDNIGNTVLHTYLSM 362 (764)
T ss_pred CceeccCCCCCCHHHHHHHHh--CCCchHHHHHHHcCCCCc-------cCCCCCCCHHHHHHHh
Confidence 999999999999999987521 234688999999999998 7889999999998764
No 22
>PHA02798 ankyrin-like protein; Provisional
Probab=99.82 E-value=9.5e-20 Score=203.16 Aligned_cols=157 Identities=26% Similarity=0.314 Sum_probs=105.8
Q ss_pred CCcccCccChHHHHHHHHcC---CHHHHHHHHhcCCCCCcccccccccccCCccccCCCCchHHHHHhcCC---HHHHHH
Q 006947 33 HLTVETDDAFASLLELAANN---DVEGFKRSIVCDPSGVDEVGLWYGRQKGSKQMVNEQRTPLMVAATYGS---IDIIRL 106 (624)
Q Consensus 33 ~ini~d~dg~TpLh~AA~~G---dle~Vk~LLe~~GadvN~~~l~~~~~~~~~~~D~~G~TPLhlAA~~G~---~eiVkl 106 (624)
+++..+.+|.||||.|+..+ +.++++.|++ .|+++|.. |.+|.||||+|+..|+ .++|++
T Consensus 101 diN~~d~~G~TpLh~a~~~~~~~~~~iv~~Ll~-~Gadvn~~-------------d~~g~tpL~~a~~~~~~~~~~vv~~ 166 (489)
T PHA02798 101 DINKKNSDGETPLYCLLSNGYINNLEILLFMIE-NGADTTLL-------------DKDGFTMLQVYLQSNHHIDIEIIKL 166 (489)
T ss_pred CCCCCCCCcCcHHHHHHHcCCcChHHHHHHHHH-cCCCcccc-------------CCCCCcHHHHHHHcCCcchHHHHHH
Confidence 34444445555555555443 3445555554 44554444 6778888888888776 788888
Q ss_pred HHHhcCCCccccCCCCCChHHHHHHhCCC-CChHHHHHHHHHCCCC----------------------------------
Q 006947 107 ILSESGADVNLSCGNDKSTALHCAASGGA-LNAVDVVKLLLAAGAD---------------------------------- 151 (624)
Q Consensus 107 LL~~~GADVN~~~d~~G~TPLH~Aa~~G~-~~~~eiVklLL~~GAD---------------------------------- 151 (624)
||++ |+|+|...+..|.||||+++..+. ....+++++|+++|++
T Consensus 167 Ll~~-gadin~~~~~~~~t~Lh~~~~~~~~~~~~~ivk~Li~~Ga~i~~~~~~~~~~~~~~l~~l~~~~~~~~~~i~~~l 245 (489)
T PHA02798 167 LLEK-GVDINTHNNKEKYDTLHCYFKYNIDRIDADILKLFVDNGFIINKENKSHKKKFMEYLNSLLYDNKRFKKNILDFI 245 (489)
T ss_pred HHHh-CCCcccccCcCCCcHHHHHHHhccccCCHHHHHHHHHCCCCcccCCccccchHHHHHHHHHhhcccchHHHHHHH
Confidence 8877 788877634567788887765320 0116777777766654
Q ss_pred -----CCCcCCCCCcHHHHHhcCCChhhHHHHHHHHHHCCCCCcccccccccccCCCCChhhhhhhcCC
Q 006947 152 -----PNFVDAKGHHPVDVIVVPPKFQDVRLTLEELLATDGSVERNLRVSTTTSNSNSPPLSPALENGS 215 (624)
Q Consensus 152 -----~n~~D~~G~TPLhlAa~~g~~~~~~~lLe~LL~~gadv~~~~~l~~a~~~~g~TpL~lA~e~Gs 215 (624)
+|.+|..|+||||+|+. .+..+++++|++.|++++ ..+..|.|||++|+++|.
T Consensus 246 ~~~~dvN~~d~~G~TPL~~A~~----~~~~~~v~~LL~~GAdin-------~~d~~G~TpL~~A~~~~~ 303 (489)
T PHA02798 246 FSYIDINQVDELGFNPLYYSVS----HNNRKIFEYLLQLGGDIN-------IITELGNTCLFTAFENES 303 (489)
T ss_pred HhcCCCCCcCcCCccHHHHHHH----cCcHHHHHHHHHcCCccc-------ccCCCCCcHHHHHHHcCc
Confidence 44456678889998887 445678888888998888 778888999999988874
No 23
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.82 E-value=1.1e-19 Score=209.61 Aligned_cols=154 Identities=16% Similarity=0.178 Sum_probs=134.5
Q ss_pred cCCCCcccCccChHHHHHHHHcCC--HHHHHHHHhcCCCCCcccccccccccCCccccCCCCchHHHH------------
Q 006947 30 DMNHLTVETDDAFASLLELAANND--VEGFKRSIVCDPSGVDEVGLWYGRQKGSKQMVNEQRTPLMVA------------ 95 (624)
Q Consensus 30 d~~~ini~d~dg~TpLh~AA~~Gd--le~Vk~LLe~~GadvN~~~l~~~~~~~~~~~D~~G~TPLhlA------------ 95 (624)
...+++.++.+|.||||.|+..|+ .++|+.||+ .|+++|.+ |..|.||||+|
T Consensus 201 ~GADVN~kD~~G~TPLH~Aa~~g~~~~eIVklLLe-~GADVN~k-------------D~~G~TPLh~Ai~~a~n~~~EIv 266 (764)
T PHA02716 201 NGVNVNLQNNHLITPLHTYLITGNVCASVIKKIIE-LGGDMDMK-------------CVNGMSPIMTYIINIDNINPEIT 266 (764)
T ss_pred cCCCCCCCCCCCCCHHHHHHHcCCCCHHHHHHHHH-cCCCCCCC-------------CCCCCCHHHHHHHhhhccCHHHH
Confidence 446788999999999999999995 589999999 99999987 68899999865
Q ss_pred -------------------------HhcCCHHHHHHHHHhcCCCccccCCCCCChHHHHHHh--CCCCChHHHHHHHHHC
Q 006947 96 -------------------------ATYGSIDIIRLILSESGADVNLSCGNDKSTALHCAAS--GGALNAVDVVKLLLAA 148 (624)
Q Consensus 96 -------------------------A~~G~~eiVklLL~~~GADVN~~~d~~G~TPLH~Aa~--~G~~~~~eiVklLL~~ 148 (624)
+..|+.++|++||++ |+++|.+ +.+|+||||+|+. .++ .++|++|++.
T Consensus 267 kiLie~~d~n~~~~~~~~L~~~i~AA~~g~leiVklLLe~-GAdIN~k-D~~G~TPLH~Aaa~~~~~---~eIVklLLe~ 341 (764)
T PHA02716 267 NIYIESLDGNKVKNIPMILHSYITLARNIDISVVYSFLQP-GVKLHYK-DSAGRTCLHQYILRHNIS---TDIIKLLHEY 341 (764)
T ss_pred HHHHHhccccccccchhhhHHHHHHHHcCCHHHHHHHHhC-CCceecc-CCCCCCHHHHHHHHhCCC---chHHHHHHHc
Confidence 456889999999998 9999999 9999999999864 456 8999999999
Q ss_pred CCCCCCcCCCCCcHHHHHhcCC----------ChhhHHHHHHHHHHCCCCCcccccccccccCCCCChhhh
Q 006947 149 GADPNFVDAKGHHPVDVIVVPP----------KFQDVRLTLEELLATDGSVERNLRVSTTTSNSNSPPLSP 209 (624)
Q Consensus 149 GAD~n~~D~~G~TPLhlAa~~g----------~~~~~~~lLe~LL~~gadv~~~~~l~~a~~~~g~TpL~l 209 (624)
|+|++.+|..|+||||+|+... ...+..+++++|+++|++++ ..+..|.||||.
T Consensus 342 GADIN~kD~~G~TPLH~A~~~lav~~~ld~~~~~~~~~eVVklLL~~GADIn-------~kn~~G~TPLh~ 405 (764)
T PHA02716 342 GNDLNEPDNIGNTVLHTYLSMLSVVNILDPETDNDIRLDVIQCLISLGADIT-------AVNCLGYTPLTS 405 (764)
T ss_pred CCCCccCCCCCCCHHHHHHHhhhhhccccccccccChHHHHHHHHHCCCCCC-------CcCCCCCChHHH
Confidence 9999999999999999986421 11356799999999999998 788999999994
No 24
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.81 E-value=1.6e-19 Score=201.54 Aligned_cols=157 Identities=17% Similarity=0.195 Sum_probs=107.2
Q ss_pred cCCCCcccCccChHHHHHHHHc---CCHHHHHHHHhcCCCCC-cccccccccccCCccccCCCCchHHHHHhc--CCHHH
Q 006947 30 DMNHLTVETDDAFASLLELAAN---NDVEGFKRSIVCDPSGV-DEVGLWYGRQKGSKQMVNEQRTPLMVAATY--GSIDI 103 (624)
Q Consensus 30 d~~~ini~d~dg~TpLh~AA~~---Gdle~Vk~LLe~~Gadv-N~~~l~~~~~~~~~~~D~~G~TPLhlAA~~--G~~ei 103 (624)
...+++.++.+|.||||.|+.. |+.++|+.||+ .|+|+ +.. |..|+||||+|+.. ++.++
T Consensus 97 ~Gadin~~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~-~Gadin~~~-------------d~~g~tpLh~a~~~~~~~~~i 162 (494)
T PHA02989 97 FGADINLKTFNGVSPIVCFIYNSNINNCDMLRFLLS-KGINVNDVK-------------NSRGYNLLHMYLESFSVKKDV 162 (494)
T ss_pred CCCCCCCCCCCCCcHHHHHHHhcccCcHHHHHHHHH-CCCCccccc-------------CCCCCCHHHHHHHhccCCHHH
Confidence 3445777777777777776654 56777777777 77777 444 56777777777643 56777
Q ss_pred HHHHHHhcCCCccccCCCCCChHHHHHHhCC----CCChHHHHHHHHHCCCCCCCc------------------------
Q 006947 104 IRLILSESGADVNLSCGNDKSTALHCAASGG----ALNAVDVVKLLLAAGADPNFV------------------------ 155 (624)
Q Consensus 104 VklLL~~~GADVN~~~d~~G~TPLH~Aa~~G----~~~~~eiVklLL~~GAD~n~~------------------------ 155 (624)
|++||++ |+|++...+..|.||||+|+..+ + .++|++|++.|++++.+
T Consensus 163 v~~Ll~~-Gadi~~~~~~~g~tpL~~a~~~~~~~~~---~~iv~~Ll~~Ga~vn~~~~~~~t~l~~~~~~~~~~~~~~~~ 238 (494)
T PHA02989 163 IKILLSF-GVNLFEKTSLYGLTPMNIYLRNDIDVIS---IKVIKYLIKKGVNIETNNNGSESVLESFLDNNKILSKKEFK 238 (494)
T ss_pred HHHHHHc-CCCccccccccCCChHHHHHhccccccc---HHHHHHHHhCCCCccccCCccccHHHHHHHhchhhcccchH
Confidence 7777777 77777632567777777776543 4 67777777776665443
Q ss_pred --------------CCCCCcHHHHHhcCCChhhHHHHHHHHHHCCCCCcccccccccccCCCCChhhhhhhcCC
Q 006947 156 --------------DAKGHHPVDVIVVPPKFQDVRLTLEELLATDGSVERNLRVSTTTSNSNSPPLSPALENGS 215 (624)
Q Consensus 156 --------------D~~G~TPLhlAa~~g~~~~~~~lLe~LL~~gadv~~~~~l~~a~~~~g~TpL~lA~e~Gs 215 (624)
|..|+||||+|+. .+..+++++|++.|++++ ..+..|.|||++|+++|.
T Consensus 239 il~~l~~~advn~~d~~G~TpL~~Aa~----~~~~~~v~~LL~~Gadin-------~~d~~G~TpL~~A~~~~~ 301 (494)
T PHA02989 239 VLNFILKYIKINKKDKKGFNPLLISAK----VDNYEAFNYLLKLGDDIY-------NVSKDGDTVLTYAIKHGN 301 (494)
T ss_pred HHHHHHhCCCCCCCCCCCCCHHHHHHH----hcCHHHHHHHHHcCCCcc-------ccCCCCCCHHHHHHHcCC
Confidence 4457777777776 344567777777777777 666777777777777774
No 25
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.81 E-value=2e-19 Score=208.18 Aligned_cols=169 Identities=24% Similarity=0.218 Sum_probs=108.6
Q ss_pred CCCCcccCccChHHHHHHHHcC-CHHHHHHHHhcCCCCCcccc---------------------cccccccCCccccCCC
Q 006947 31 MNHLTVETDDAFASLLELAANN-DVEGFKRSIVCDPSGVDEVG---------------------LWYGRQKGSKQMVNEQ 88 (624)
Q Consensus 31 ~~~ini~d~dg~TpLh~AA~~G-dle~Vk~LLe~~GadvN~~~---------------------l~~~~~~~~~~~D~~G 88 (624)
..+++..+.+|.||||.|+..| +.+.++.|+. .|++++..+ ++...+.+.+..|..|
T Consensus 297 gadin~~d~~g~TpLh~Aa~~g~~~~~v~~Ll~-~gadin~~d~~g~TpLh~A~~~~~~~~iv~lLl~~gadin~~d~~G 375 (682)
T PHA02876 297 GADVNAKNIKGETPLYLMAKNGYDTENIRTLIM-LGADVNAADRLYITPLHQASTLDRNKDIVITLLELGANVNARDYCD 375 (682)
T ss_pred CCCCCCcCCCCCCHHHHHHHhCCCHHHHHHHHH-cCCCCCCcccCCCcHHHHHHHhCCcHHHHHHHHHcCCCCccCCCCC
Confidence 3455666677777777777776 4666776666 666666543 1223344555566667
Q ss_pred CchHHHHHhcCCHHHHHHHHHhcCCCccccCCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCCCcCCCCCcHHHHHhc
Q 006947 89 RTPLMVAATYGSIDIIRLILSESGADVNLSCGNDKSTALHCAASGGALNAVDVVKLLLAAGADPNFVDAKGHHPVDVIVV 168 (624)
Q Consensus 89 ~TPLhlAA~~G~~eiVklLL~~~GADVN~~~d~~G~TPLH~Aa~~G~~~~~eiVklLL~~GAD~n~~D~~G~TPLhlAa~ 168 (624)
.||||+|+..|+.++|++||+. |++++.. +..|.||||+|+..+. ...++++|++.|+++|.+|..|+||||+|+.
T Consensus 376 ~TpLh~Aa~~~~~~iv~~Ll~~-gad~~~~-~~~g~T~Lh~A~~~~~--~~~~vk~Ll~~gadin~~d~~G~TpLh~Aa~ 451 (682)
T PHA02876 376 KTPIHYAAVRNNVVIINTLLDY-GADIEAL-SQKIGTALHFALCGTN--PYMSVKTLIDRGANVNSKNKDLSTPLHYACK 451 (682)
T ss_pred CCHHHHHHHcCCHHHHHHHHHC-CCCcccc-CCCCCchHHHHHHcCC--HHHHHHHHHhCCCCCCcCCCCCChHHHHHHH
Confidence 7777777777777777777766 6777766 6666677777665443 1455677777777777777777777777765
Q ss_pred CCChhhHHHHHHHHHHCCCCCcccccccccccCCCCChhhhhhhcC
Q 006947 169 PPKFQDVRLTLEELLATDGSVERNLRVSTTTSNSNSPPLSPALENG 214 (624)
Q Consensus 169 ~g~~~~~~~lLe~LL~~gadv~~~~~l~~a~~~~g~TpL~lA~e~G 214 (624)
.+ ...+++++|++.|++++ ..+..|.|||++|++.+
T Consensus 452 ~~---~~~~iv~lLl~~Gad~n-------~~d~~g~tpl~~a~~~~ 487 (682)
T PHA02876 452 KN---CKLDVIEMLLDNGADVN-------AINIQNQYPLLIALEYH 487 (682)
T ss_pred hC---CcHHHHHHHHHCCCCCC-------CCCCCCCCHHHHHHHhC
Confidence 21 23456667777777766 56666777777766543
No 26
>PHA02946 ankyin-like protein; Provisional
Probab=99.81 E-value=1.8e-19 Score=199.17 Aligned_cols=160 Identities=16% Similarity=0.200 Sum_probs=136.7
Q ss_pred ccCCCCcccCccChHHHHHHHHcCC--HHHHHHHHhcCCCCCcccccccccccCCccccCCCCchHHHHHhcCCHHHHHH
Q 006947 29 VDMNHLTVETDDAFASLLELAANND--VEGFKRSIVCDPSGVDEVGLWYGRQKGSKQMVNEQRTPLMVAATYGSIDIIRL 106 (624)
Q Consensus 29 ~d~~~ini~d~dg~TpLh~AA~~Gd--le~Vk~LLe~~GadvN~~~l~~~~~~~~~~~D~~G~TPLhlAA~~G~~eiVkl 106 (624)
....+++.+|.+|.||||+|+..++ .++++.||+ .|+++|... |.+|.|||| ||..|+.+++++
T Consensus 93 ~~GAdin~~d~~g~TpLh~A~~~~~~~~e~v~lLl~-~Gadin~~~------------d~~g~tpL~-aa~~~~~~vv~~ 158 (446)
T PHA02946 93 THGADPNACDKQHKTPLYYLSGTDDEVIERINLLVQ-YGAKINNSV------------DEEGCGPLL-ACTDPSERVFKK 158 (446)
T ss_pred HCcCCCCCCCCCCCCHHHHHHHcCCchHHHHHHHHH-cCCCccccc------------CCCCCcHHH-HHHCCChHHHHH
Confidence 3345788899999999999998764 889999998 999998643 789999997 777899999999
Q ss_pred HHHhcCCCccccCCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCCCcCCCCCcHHHHHhcCCChhhHHHHHHHHHHCC
Q 006947 107 ILSESGADVNLSCGNDKSTALHCAASGGALNAVDVVKLLLAAGADPNFVDAKGHHPVDVIVVPPKFQDVRLTLEELLATD 186 (624)
Q Consensus 107 LL~~~GADVN~~~d~~G~TPLH~Aa~~G~~~~~eiVklLL~~GAD~n~~D~~G~TPLhlAa~~g~~~~~~~lLe~LL~~g 186 (624)
|++. |++++.+ +..|+||||+|+..++ ...+++++|++.|+|++.+|..|+||||+|+..+. ...+++++|+. |
T Consensus 159 Ll~~-gad~~~~-d~~G~t~Lh~A~~~~~-~~~~~v~~Ll~~Gadin~~d~~G~TpLH~Aa~~~~--~~~~iv~lLl~-g 232 (446)
T PHA02946 159 IMSI-GFEARIV-DKFGKNHIHRHLMSDN-PKASTISWMMKLGISPSKPDHDGNTPLHIVCSKTV--KNVDIINLLLP-S 232 (446)
T ss_pred HHhc-ccccccc-CCCCCCHHHHHHHhcC-CCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCC--CcHHHHHHHHc-C
Confidence 9998 9999999 9999999999887544 12689999999999999999999999999998431 24567888875 7
Q ss_pred CCCcccccccccccCCCCChhhhhhhcCC
Q 006947 187 GSVERNLRVSTTTSNSNSPPLSPALENGS 215 (624)
Q Consensus 187 adv~~~~~l~~a~~~~g~TpL~lA~e~Gs 215 (624)
++++ ..+..|.||||+|++.++
T Consensus 233 adin-------~~d~~G~TpLh~A~~~~~ 254 (446)
T PHA02946 233 TDVN-------KQNKFGDSPLTLLIKTLS 254 (446)
T ss_pred CCCC-------CCCCCCCCHHHHHHHhCC
Confidence 8887 788999999999999875
No 27
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.81 E-value=1.6e-19 Score=199.53 Aligned_cols=156 Identities=20% Similarity=0.267 Sum_probs=140.4
Q ss_pred CCCcccCccChHHHHHHHHcCCHHHHHHHHhcCCCCCcccccccccccCCccccCCCCchHHH-----HHhcCCHHHHHH
Q 006947 32 NHLTVETDDAFASLLELAANNDVEGFKRSIVCDPSGVDEVGLWYGRQKGSKQMVNEQRTPLMV-----AATYGSIDIIRL 106 (624)
Q Consensus 32 ~~ini~d~dg~TpLh~AA~~Gdle~Vk~LLe~~GadvN~~~l~~~~~~~~~~~D~~G~TPLhl-----AA~~G~~eiVkl 106 (624)
...+..+..+.||||.|+..|+.++|+.||+ .|++++.. +..|.||||+ |+..|+.++|++
T Consensus 26 ~~~~~~~~~~~t~L~~A~~~~~~~ivk~Ll~-~g~~~~~~-------------~~~~~t~L~~~~~~~a~~~~~~~iv~~ 91 (480)
T PHA03100 26 DLNDYSYKKPVLPLYLAKEARNIDVVKILLD-NGADINSS-------------TKNNSTPLHYLSNIKYNLTDVKEIVKL 91 (480)
T ss_pred ccchhhhcccchhhhhhhccCCHHHHHHHHH-cCCCCCCc-------------cccCcCHHHHHHHHHHHhhchHHHHHH
Confidence 4455678899999999999999999999999 89999876 5788999999 999999999999
Q ss_pred HHHhcCCCccccCCCCCChHHHHHH--hCCCCChHHHHHHHHHCCCCCCCcCCCCCcHHHHHhcCCChhhHHHHHHHHHH
Q 006947 107 ILSESGADVNLSCGNDKSTALHCAA--SGGALNAVDVVKLLLAAGADPNFVDAKGHHPVDVIVVPPKFQDVRLTLEELLA 184 (624)
Q Consensus 107 LL~~~GADVN~~~d~~G~TPLH~Aa--~~G~~~~~eiVklLL~~GAD~n~~D~~G~TPLhlAa~~g~~~~~~~lLe~LL~ 184 (624)
|++. |++++.. +..|.||||+|+ ..|+ .++|++|+++|++++..|..|.||||+|+..+. ...+++++|++
T Consensus 92 Ll~~-ga~i~~~-d~~g~tpL~~A~~~~~~~---~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~--~~~~iv~~Ll~ 164 (480)
T PHA03100 92 LLEY-GANVNAP-DNNGITPLLYAISKKSNS---YSIVEYLLDNGANVNIKNSDGENLLHLYLESNK--IDLKILKLLID 164 (480)
T ss_pred HHHC-CCCCCCC-CCCCCchhhHHHhcccCh---HHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCC--ChHHHHHHHHH
Confidence 9998 9999988 899999999999 9999 999999999999999999999999999998431 26788999999
Q ss_pred CCCCCcccccccccccCCCCChhhhhhhcCC
Q 006947 185 TDGSVERNLRVSTTTSNSNSPPLSPALENGS 215 (624)
Q Consensus 185 ~gadv~~~~~l~~a~~~~g~TpL~lA~e~Gs 215 (624)
.|++++ ..+..|.||||+|+..|.
T Consensus 165 ~g~din-------~~d~~g~tpL~~A~~~~~ 188 (480)
T PHA03100 165 KGVDIN-------AKNRYGYTPLHIAVEKGN 188 (480)
T ss_pred CCCCcc-------cccCCCCCHHHHHHHhCC
Confidence 999988 666789999999999883
No 28
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.81 E-value=1.6e-19 Score=173.80 Aligned_cols=134 Identities=18% Similarity=0.185 Sum_probs=116.0
Q ss_pred CcccCccChHHHHHHHHcCCHHHHH----HHHhcCCCCCcccccccccccCCccccCCCCchHHHHHhcCCHHH---HHH
Q 006947 34 LTVETDDAFASLLELAANNDVEGFK----RSIVCDPSGVDEVGLWYGRQKGSKQMVNEQRTPLMVAATYGSIDI---IRL 106 (624)
Q Consensus 34 ini~d~dg~TpLh~AA~~Gdle~Vk----~LLe~~GadvN~~~l~~~~~~~~~~~D~~G~TPLhlAA~~G~~ei---Vkl 106 (624)
++..+.++.+.||.||..|+++.++ .|++ .|.+++.. |.+|+||||+||.+|+.++ |++
T Consensus 13 ~~~~~~~~~~~l~~a~~~g~~~~l~~~~~~l~~-~g~~~~~~-------------d~~g~t~Lh~Aa~~g~~~~~~~i~~ 78 (166)
T PHA02743 13 AVEIDEDEQNTFLRICRTGNIYELMEVAPFISG-DGHLLHRY-------------DHHGRQCTHMVAWYDRANAVMKIEL 78 (166)
T ss_pred HhhhccCCCcHHHHHHHcCCHHHHHHHHHHHhh-cchhhhcc-------------CCCCCcHHHHHHHhCccCHHHHHHH
Confidence 4446677889999999999995544 4555 77777765 6899999999999998654 789
Q ss_pred HHHhcCCCccccCC-CCCChHHHHHHhCCCCChHHHHHHHHH-CCCCCCCcCCCCCcHHHHHhcCCChhhHHHHHHHHHH
Q 006947 107 ILSESGADVNLSCG-NDKSTALHCAASGGALNAVDVVKLLLA-AGADPNFVDAKGHHPVDVIVVPPKFQDVRLTLEELLA 184 (624)
Q Consensus 107 LL~~~GADVN~~~d-~~G~TPLH~Aa~~G~~~~~eiVklLL~-~GAD~n~~D~~G~TPLhlAa~~g~~~~~~~lLe~LL~ 184 (624)
|++. |+++|.+ + ..|.||||+|+..|+ .+++++|+. .|++++.+|..|.||||+|+. .+..+++++|++
T Consensus 79 Ll~~-Gadin~~-d~~~g~TpLh~A~~~g~---~~iv~~Ll~~~gad~~~~d~~g~tpL~~A~~----~~~~~iv~~Ll~ 149 (166)
T PHA02743 79 LVNM-GADINAR-ELGTGNTLLHIAASTKN---YELAEWLCRQLGVNLGAINYQHETAYHIAYK----MRDRRMMEILRA 149 (166)
T ss_pred HHHc-CCCCCCC-CCCCCCcHHHHHHHhCC---HHHHHHHHhccCCCccCcCCCCCCHHHHHHH----cCCHHHHHHHHH
Confidence 9988 9999998 6 589999999999999 999999995 799999999999999999998 455679999999
Q ss_pred CCCCCc
Q 006947 185 TDGSVE 190 (624)
Q Consensus 185 ~gadv~ 190 (624)
+|++++
T Consensus 150 ~ga~~~ 155 (166)
T PHA02743 150 NGAVCD 155 (166)
T ss_pred cCCCCC
Confidence 999988
No 29
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.81 E-value=2.6e-19 Score=207.27 Aligned_cols=170 Identities=18% Similarity=0.199 Sum_probs=144.2
Q ss_pred cCCCCcccCccChHHHHHHHHcCCHHHHHHHHhcCCCCCcccc-------------------------------------
Q 006947 30 DMNHLTVETDDAFASLLELAANNDVEGFKRSIVCDPSGVDEVG------------------------------------- 72 (624)
Q Consensus 30 d~~~ini~d~dg~TpLh~AA~~Gdle~Vk~LLe~~GadvN~~~------------------------------------- 72 (624)
...+++.+|..|.||||.||..|+.++|+.|++ .|++++...
T Consensus 167 ~Gadvn~~d~~G~TpLh~Aa~~G~~~iv~~LL~-~Gad~n~~~~~g~t~L~~A~~~~~~~ivk~Ll~~~~~~~~~~~~L~ 245 (682)
T PHA02876 167 GGADVNAKDIYCITPIHYAAERGNAKMVNLLLS-YGADVNIIALDDLSVLECAVDSKNIDTIKAIIDNRSNINKNDLSLL 245 (682)
T ss_pred CCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHH-CCCCcCccCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCcHHHH
Confidence 445788889999999999999999999999999 899987542
Q ss_pred ------------cccccccCCccccCCCCchHHHHHhcCCH-HHHHHHHHhcCCCccccCCCCCChHHHHHHhCC-CCCh
Q 006947 73 ------------LWYGRQKGSKQMVNEQRTPLMVAATYGSI-DIIRLILSESGADVNLSCGNDKSTALHCAASGG-ALNA 138 (624)
Q Consensus 73 ------------l~~~~~~~~~~~D~~G~TPLhlAA~~G~~-eiVklLL~~~GADVN~~~d~~G~TPLH~Aa~~G-~~~~ 138 (624)
+++..+.+.+..|..|.||||+|+..|+. +++++|++. |+++|.. +.+|.||||+|+..| .
T Consensus 246 ~ai~~~~~~~~~~Ll~~g~~vn~~d~~g~TpLh~Aa~~~~~~~iv~lLl~~-gadin~~-d~~g~TpLh~Aa~~g~~--- 320 (682)
T PHA02876 246 KAIRNEDLETSLLLYDAGFSVNSIDDCKNTPLHHASQAPSLSRLVPKLLER-GADVNAK-NIKGETPLYLMAKNGYD--- 320 (682)
T ss_pred HHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhCCCHHHHHHHHHHC-CCCCCCc-CCCCCCHHHHHHHhCCC---
Confidence 12223345666778899999999999986 588899988 8999998 899999999999988 5
Q ss_pred HHHHHHHHHCCCCCCCcCCCCCcHHHHHhcCCChhhHHHHHHHHHHCCCCCcccccccccccCCCCChhhhhhhcCC
Q 006947 139 VDVVKLLLAAGADPNFVDAKGHHPVDVIVVPPKFQDVRLTLEELLATDGSVERNLRVSTTTSNSNSPPLSPALENGS 215 (624)
Q Consensus 139 ~eiVklLL~~GAD~n~~D~~G~TPLhlAa~~g~~~~~~~lLe~LL~~gadv~~~~~l~~a~~~~g~TpL~lA~e~Gs 215 (624)
.+++++|+..|++++..|..|.||||+|+.. .....+++.|++.|++++ ..+..|.||||+|+..|.
T Consensus 321 ~~~v~~Ll~~gadin~~d~~g~TpLh~A~~~---~~~~~iv~lLl~~gadin-------~~d~~G~TpLh~Aa~~~~ 387 (682)
T PHA02876 321 TENIRTLIMLGADVNAADRLYITPLHQASTL---DRNKDIVITLLELGANVN-------ARDYCDKTPIHYAAVRNN 387 (682)
T ss_pred HHHHHHHHHcCCCCCCcccCCCcHHHHHHHh---CCcHHHHHHHHHcCCCCc-------cCCCCCCCHHHHHHHcCC
Confidence 8899999999999999999999999999873 235677888999999988 778889999999998884
No 30
>PHA02741 hypothetical protein; Provisional
Probab=99.81 E-value=1.6e-19 Score=173.98 Aligned_cols=134 Identities=19% Similarity=0.215 Sum_probs=114.8
Q ss_pred CCcccCccChHHHHHHHHcCCHHHHHHHHhc-----CCCCCcccccccccccCCccccCCCCchHHHHHhcCC----HHH
Q 006947 33 HLTVETDDAFASLLELAANNDVEGFKRSIVC-----DPSGVDEVGLWYGRQKGSKQMVNEQRTPLMVAATYGS----IDI 103 (624)
Q Consensus 33 ~ini~d~dg~TpLh~AA~~Gdle~Vk~LLe~-----~GadvN~~~l~~~~~~~~~~~D~~G~TPLhlAA~~G~----~ei 103 (624)
.++.++..|.|+||+||..|+.++|+.|+.. .|++++.. |..|.||||+|+..|+ .++
T Consensus 13 ~~~~~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~-------------d~~g~T~Lh~A~~~g~~~~~~~i 79 (169)
T PHA02741 13 MIAEKNSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNAT-------------DDAGQMCIHIAAEKHEAQLAAEI 79 (169)
T ss_pred HhhccccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhcc-------------CCCCCcHHHHHHHcCChHHHHHH
Confidence 3667888999999999999999999998652 24556655 7899999999999999 589
Q ss_pred HHHHHHhcCCCccccCCC-CCChHHHHHHhCCCCChHHHHHHHHH-CCCCCCCcCCCCCcHHHHHhcCCChhhHHHHHHH
Q 006947 104 IRLILSESGADVNLSCGN-DKSTALHCAASGGALNAVDVVKLLLA-AGADPNFVDAKGHHPVDVIVVPPKFQDVRLTLEE 181 (624)
Q Consensus 104 VklLL~~~GADVN~~~d~-~G~TPLH~Aa~~G~~~~~eiVklLL~-~GAD~n~~D~~G~TPLhlAa~~g~~~~~~~lLe~ 181 (624)
+++|++. |+++|.+ +. .|.||||+|+..++ .+++++||. .|++++.+|..|+||||+|+..+ ..+++++
T Consensus 80 i~~Ll~~-gadin~~-~~~~g~TpLh~A~~~~~---~~iv~~Ll~~~g~~~~~~n~~g~tpL~~A~~~~----~~~iv~~ 150 (169)
T PHA02741 80 IDHLIEL-GADINAQ-EMLEGDTALHLAAHRRD---HDLAEWLCCQPGIDLHFCNADNKSPFELAIDNE----DVAMMQI 150 (169)
T ss_pred HHHHHHc-CCCCCCC-CcCCCCCHHHHHHHcCC---HHHHHHHHhCCCCCCCcCCCCCCCHHHHHHHCC----CHHHHHH
Confidence 9999988 9999998 64 89999999999999 999999998 59999999999999999999954 4566666
Q ss_pred HHHCCCC
Q 006947 182 LLATDGS 188 (624)
Q Consensus 182 LL~~gad 188 (624)
|++.++.
T Consensus 151 L~~~~~~ 157 (169)
T PHA02741 151 LREIVAT 157 (169)
T ss_pred HHHHHHH
Confidence 6665543
No 31
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.80 E-value=5.8e-20 Score=195.54 Aligned_cols=166 Identities=24% Similarity=0.309 Sum_probs=145.0
Q ss_pred cCCCCcccCccChHHHHHHHHcCCHHHHHHHHhcCCCCCcccccccccccCCccccCCCCchHHHHHhcCCHHHHHHHHH
Q 006947 30 DMNHLTVETDDAFASLLELAANNDVEGFKRSIVCDPSGVDEVGLWYGRQKGSKQMVNEQRTPLMVAATYGSIDIIRLILS 109 (624)
Q Consensus 30 d~~~ini~d~dg~TpLh~AA~~Gdle~Vk~LLe~~GadvN~~~l~~~~~~~~~~~D~~G~TPLhlAA~~G~~eiVklLL~ 109 (624)
++...--...+|.|||..||++|+.++|++|+++-++++...+.-. -+....+|.+||..|+..||++|||.||+
T Consensus 31 ei~~l~~~~~~g~tPL~iaaRnGH~~vVeyLle~~~a~~e~~GsV~-----FDge~IegappLWaAsaAGHl~vVk~L~~ 105 (615)
T KOG0508|consen 31 EIISLIGEVQNGGTPLLIAARNGHADVVEYLLEHCRASPEQGGSVR-----FDGETIEGAPPLWAASAAGHLEVVKLLLR 105 (615)
T ss_pred HHHHHhccccCCCCceeeehhcCcHHHHHHHHHHhcCCccCCceEE-----eCCcccCCCchhhHHhccCcHHHHHHHHH
Confidence 3444445567788999999999999999999998888887764110 01124578999999999999999999999
Q ss_pred hcCCCccccCCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCCCcCCCCCcHHHHHhcCCChhhHHHHHHHHHHCCCCC
Q 006947 110 ESGADVNLSCGNDKSTALHCAASGGALNAVDVVKLLLAAGADPNFVDAKGHHPVDVIVVPPKFQDVRLTLEELLATDGSV 189 (624)
Q Consensus 110 ~~GADVN~~~d~~G~TPLH~Aa~~G~~~~~eiVklLL~~GAD~n~~D~~G~TPLhlAa~~g~~~~~~~lLe~LL~~gadv 189 (624)
+ ||+||.. .....|||.-||..|+ .++||+|+++|||++..|..|+|.||+|+. .+..+|+++|++.|+|+
T Consensus 106 ~-ga~VN~t-T~TNStPLraACfDG~---leivKyLvE~gad~~IanrhGhTcLmIa~y----kGh~~I~qyLle~gADv 176 (615)
T KOG0508|consen 106 R-GASVNDT-TRTNSTPLRAACFDGH---LEIVKYLVEHGADPEIANRHGHTCLMIACY----KGHVDIAQYLLEQGADV 176 (615)
T ss_pred h-cCccccc-cccCCccHHHHHhcch---hHHHHHHHHcCCCCcccccCCCeeEEeeec----cCchHHHHHHHHhCCCc
Confidence 9 8999988 7888899999999999 999999999999999999999999999998 66778999999999999
Q ss_pred cccccccccccCCCCChhhhhhhcCCC
Q 006947 190 ERNLRVSTTTSNSNSPPLSPALENGSP 216 (624)
Q Consensus 190 ~~~~~l~~a~~~~g~TpL~lA~e~Gs~ 216 (624)
+ +++..|.|+||.++|.|+.
T Consensus 177 n-------~ks~kGNTALH~caEsG~v 196 (615)
T KOG0508|consen 177 N-------AKSYKGNTALHDCAESGSV 196 (615)
T ss_pred c-------hhcccCchHHHhhhhcccH
Confidence 9 8899999999999999954
No 32
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.80 E-value=3.8e-19 Score=198.61 Aligned_cols=157 Identities=17% Similarity=0.147 Sum_probs=125.4
Q ss_pred ccccCCCCcccCccChHHHHHHHHcC--CHHHHHHHHhcCCCCCcccc-------------------------ccccccc
Q 006947 27 TNVDMNHLTVETDDAFASLLELAANN--DVEGFKRSIVCDPSGVDEVG-------------------------LWYGRQK 79 (624)
Q Consensus 27 ~~~d~~~ini~d~dg~TpLh~AA~~G--dle~Vk~LLe~~GadvN~~~-------------------------l~~~~~~ 79 (624)
.....-+++.. .+|.|+||.++..+ +.++|+.||+ .|+|+|..+ +++..++
T Consensus 22 LL~~GadvN~~-~~g~t~l~~~~~~~~~~~~iv~~Ll~-~GAdvn~~~~~~tpL~~a~~~~~~~~~~~~~iv~~Ll~~Ga 99 (494)
T PHA02989 22 LLRTGFDVNEE-YRGNSILLLYLKRKDVKIKIVKLLID-NGADVNYKGYIETPLCAVLRNREITSNKIKKIVKLLLKFGA 99 (494)
T ss_pred HHHcCCCcccc-cCCCCHHHHHHhcCCCChHHHHHHHH-cCCCccCCCCCCCcHHHHHhccCcchhhHHHHHHHHHHCCC
Confidence 33444566666 56788887666543 6788888888 888888543 2235566
Q ss_pred CCccccCCCCchHHHHHhc---CCHHHHHHHHHhcCCCc-cccCCCCCChHHHHHHhC--CCCChHHHHHHHHHCCCCCC
Q 006947 80 GSKQMVNEQRTPLMVAATY---GSIDIIRLILSESGADV-NLSCGNDKSTALHCAASG--GALNAVDVVKLLLAAGADPN 153 (624)
Q Consensus 80 ~~~~~D~~G~TPLhlAA~~---G~~eiVklLL~~~GADV-N~~~d~~G~TPLH~Aa~~--G~~~~~eiVklLL~~GAD~n 153 (624)
+.+..|.+|.||||.|+.. |+.++|++||++ |||+ +.+ +..|.||||+|+.. ++ .++|++|+++|+|++
T Consensus 100 din~~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~-Gadin~~~-d~~g~tpLh~a~~~~~~~---~~iv~~Ll~~Gadi~ 174 (494)
T PHA02989 100 DINLKTFNGVSPIVCFIYNSNINNCDMLRFLLSK-GINVNDVK-NSRGYNLLHMYLESFSVK---KDVIKILLSFGVNLF 174 (494)
T ss_pred CCCCCCCCCCcHHHHHHHhcccCcHHHHHHHHHC-CCCccccc-CCCCCCHHHHHHHhccCC---HHHHHHHHHcCCCcc
Confidence 7777889999999988765 689999999998 9999 677 88999999998764 46 899999999999999
Q ss_pred C-cCCCCCcHHHHHhcCCChhhHHHHHHHHHHCCCCCc
Q 006947 154 F-VDAKGHHPVDVIVVPPKFQDVRLTLEELLATDGSVE 190 (624)
Q Consensus 154 ~-~D~~G~TPLhlAa~~g~~~~~~~lLe~LL~~gadv~ 190 (624)
. .+..|.||||+|+..+...+..+++++|++.|++++
T Consensus 175 ~~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~vn 212 (494)
T PHA02989 175 EKTSLYGLTPMNIYLRNDIDVISIKVIKYLIKKGVNIE 212 (494)
T ss_pred ccccccCCChHHHHHhcccccccHHHHHHHHhCCCCcc
Confidence 8 688999999999886555567889999999999887
No 33
>PHA02798 ankyrin-like protein; Provisional
Probab=99.80 E-value=4.6e-19 Score=197.68 Aligned_cols=173 Identities=15% Similarity=0.154 Sum_probs=139.5
Q ss_pred CccccCCCCcccCccChHHHHHHHHc-----CCHHHHHHHHhcCCCCCcccccccccccCCccccCCCCchHHHHHhcC-
Q 006947 26 HTNVDMNHLTVETDDAFASLLELAAN-----NDVEGFKRSIVCDPSGVDEVGLWYGRQKGSKQMVNEQRTPLMVAATYG- 99 (624)
Q Consensus 26 ~~~~d~~~ini~d~dg~TpLh~AA~~-----Gdle~Vk~LLe~~GadvN~~~l~~~~~~~~~~~D~~G~TPLhlAA~~G- 99 (624)
.......+++..+..|.||||.|+.+ +..++++.|++ .|+|+|.. |.+|+||||+|+..|
T Consensus 56 ~Ll~~Gadvn~~d~~g~TpL~~~~~n~~~~~~~~~iv~~Ll~-~GadiN~~-------------d~~G~TpLh~a~~~~~ 121 (489)
T PHA02798 56 LFINLGANVNGLDNEYSTPLCTILSNIKDYKHMLDIVKILIE-NGADINKK-------------NSDGETPLYCLLSNGY 121 (489)
T ss_pred HHHHCCCCCCCCCCCCCChHHHHHHhHHhHHhHHHHHHHHHH-CCCCCCCC-------------CCCcCcHHHHHHHcCC
Confidence 33455667888899999999998764 67899999998 89999987 688999999999876
Q ss_pred --CHHHHHHHHHhcCCCccccCCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCCCcC-CCCCcHHHHHhcCCChhhHH
Q 006947 100 --SIDIIRLILSESGADVNLSCGNDKSTALHCAASGGALNAVDVVKLLLAAGADPNFVD-AKGHHPVDVIVVPPKFQDVR 176 (624)
Q Consensus 100 --~~eiVklLL~~~GADVN~~~d~~G~TPLH~Aa~~G~~~~~eiVklLL~~GAD~n~~D-~~G~TPLhlAa~~g~~~~~~ 176 (624)
+.+++++|+++ |||+|.. +.+|.||||+|+..|+....+++++|+++|+|++..+ ..|.||||.++..+......
T Consensus 122 ~~~~~iv~~Ll~~-Gadvn~~-d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~gadin~~~~~~~~t~Lh~~~~~~~~~~~~ 199 (489)
T PHA02798 122 INNLEILLFMIEN-GADTTLL-DKDGFTMLQVYLQSNHHIDIEIIKLLLEKGVDINTHNNKEKYDTLHCYFKYNIDRIDA 199 (489)
T ss_pred cChHHHHHHHHHc-CCCcccc-CCCCCcHHHHHHHcCCcchHHHHHHHHHhCCCcccccCcCCCcHHHHHHHhccccCCH
Confidence 78999999988 9999998 9999999999999775344899999999999999885 57899999988644334567
Q ss_pred HHHHHHHHCCCCCcc-----cccc---------------------------cccccCCCCChhhhhhhcC
Q 006947 177 LTLEELLATDGSVER-----NLRV---------------------------STTTSNSNSPPLSPALENG 214 (624)
Q Consensus 177 ~lLe~LL~~gadv~~-----~~~l---------------------------~~a~~~~g~TpL~lA~e~G 214 (624)
+++++|+++|++++. .+.+ ....+..|.||||+|+..|
T Consensus 200 ~ivk~Li~~Ga~i~~~~~~~~~~~~~~l~~l~~~~~~~~~~i~~~l~~~~dvN~~d~~G~TPL~~A~~~~ 269 (489)
T PHA02798 200 DILKLFVDNGFIINKENKSHKKKFMEYLNSLLYDNKRFKKNILDFIFSYIDINQVDELGFNPLYYSVSHN 269 (489)
T ss_pred HHHHHHHHCCCCcccCCccccchHHHHHHHHHhhcccchHHHHHHHHhcCCCCCcCcCCccHHHHHHHcC
Confidence 889999999987752 1111 1135667999999998775
No 34
>PHA02795 ankyrin-like protein; Provisional
Probab=99.80 E-value=5.6e-19 Score=192.57 Aligned_cols=149 Identities=14% Similarity=0.080 Sum_probs=133.5
Q ss_pred ccCccChHHHHHHHH--cCCHHHHHHHHhcCCCCCcccccccccccCCccccCCCCchHHHHHhcCCHHHHHHHHHhcCC
Q 006947 36 VETDDAFASLLELAA--NNDVEGFKRSIVCDPSGVDEVGLWYGRQKGSKQMVNEQRTPLMVAATYGSIDIIRLILSESGA 113 (624)
Q Consensus 36 i~d~dg~TpLh~AA~--~Gdle~Vk~LLe~~GadvN~~~l~~~~~~~~~~~D~~G~TPLhlAA~~G~~eiVklLL~~~GA 113 (624)
.+++.+.|+||.|+. .|++++|+.||+ +|+|++.. ++.||||.|+..|+.++|++|+++ |+
T Consensus 111 ~~~~~~~~~L~~~~~n~~n~~eiV~~LI~-~GADIn~~---------------~~~t~lh~A~~~~~~eIVk~Lls~-Ga 173 (437)
T PHA02795 111 KNCNSVQDLLLYYLSNAYVEIDIVDFMVD-HGAVIYKI---------------ECLNAYFRGICKKESSVVEFILNC-GI 173 (437)
T ss_pred hccccccHHHHHHHHhcCCCHHHHHHHHH-CCCCCCCC---------------CCCCHHHHHHHcCcHHHHHHHHhc-CC
Confidence 577789999999999 999999999999 99999864 457999999999999999999999 87
Q ss_pred CccccCC-----CCCChHHHHHHhCCCCChHHHHHHHHHCCCCCCCcCCCCCcHHHHHhcCCChhhHHHHHHHHHHCCCC
Q 006947 114 DVNLSCG-----NDKSTALHCAASGGALNAVDVVKLLLAAGADPNFVDAKGHHPVDVIVVPPKFQDVRLTLEELLATDGS 188 (624)
Q Consensus 114 DVN~~~d-----~~G~TPLH~Aa~~G~~~~~eiVklLL~~GAD~n~~D~~G~TPLhlAa~~g~~~~~~~lLe~LL~~gad 188 (624)
+.+...+ ..|.|++|.|+..++ .+++++|+++|||+|.+|..|.||||+|+. .+..+++++|+++|++
T Consensus 174 ~~~n~~~~~l~~~~~~t~l~~a~~~~~---~eIve~LIs~GADIN~kD~~G~TpLh~Aa~----~g~~eiVelLL~~GAd 246 (437)
T PHA02795 174 PDENDVKLDLYKIIQYTRGFLVDEPTV---LEIYKLCIPYIEDINQLDAGGRTLLYRAIY----AGYIDLVSWLLENGAN 246 (437)
T ss_pred cccccccchhhhhhccchhHHHHhcCH---HHHHHHHHhCcCCcCcCCCCCCCHHHHHHH----cCCHHHHHHHHHCCCC
Confidence 5432211 347899999999999 999999999999999999999999999998 5667899999999999
Q ss_pred CcccccccccccCCCCChhhhhhhcCC
Q 006947 189 VERNLRVSTTTSNSNSPPLSPALENGS 215 (624)
Q Consensus 189 v~~~~~l~~a~~~~g~TpL~lA~e~Gs 215 (624)
++ ..+..|.||||+|+.+|.
T Consensus 247 IN-------~~d~~G~TpLh~Aa~~g~ 266 (437)
T PHA02795 247 VN-------AVMSNGYTCLDVAVDRGS 266 (437)
T ss_pred CC-------CcCCCCCCHHHHHHHcCC
Confidence 99 888999999999999995
No 35
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.79 E-value=6.9e-20 Score=179.33 Aligned_cols=170 Identities=25% Similarity=0.323 Sum_probs=145.9
Q ss_pred ccCCCCcccCccChHHHHHHHHcCCHHHHHHHHhcCCCCCccccc-------c-----------cccccCCccccCCCCc
Q 006947 29 VDMNHLTVETDDAFASLLELAANNDVEGFKRSIVCDPSGVDEVGL-------W-----------YGRQKGSKQMVNEQRT 90 (624)
Q Consensus 29 ~d~~~ini~d~dg~TpLh~AA~~Gdle~Vk~LLe~~GadvN~~~l-------~-----------~~~~~~~~~~D~~G~T 90 (624)
.+...+.-.+.+|++.++.++-.++.+.+..+|. .++..|++.+ | .-...-++..|+.|.|
T Consensus 84 ~~~~~~~~t~p~g~~~~~v~ap~~s~~k~sttlt-N~~rgnevs~~p~s~~slsVhql~L~~~~~~~~n~VN~~De~GfT 162 (296)
T KOG0502|consen 84 LDPDAIDETDPEGWSALLVAAPCGSVDKVSTTLT-NGARGNEVSLMPWSPLSLSVHQLHLDVVDLLVNNKVNACDEFGFT 162 (296)
T ss_pred cCCCCCCCCCchhhhhhhhcCCCCCcceeeeeec-ccccCCccccccCChhhHHHHHHHHHHHHHHhhccccCccccCch
Confidence 4444555566668888888888888887777777 7777776651 0 1122345677999999
Q ss_pred hHHHHHhcCCHHHHHHHHHhcCCCccccCCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCCCcCCCCCcHHHHHhcCC
Q 006947 91 PLMVAATYGSIDIIRLILSESGADVNLSCGNDKSTALHCAASGGALNAVDVVKLLLAAGADPNFVDAKGHHPVDVIVVPP 170 (624)
Q Consensus 91 PLhlAA~~G~~eiVklLL~~~GADVN~~~d~~G~TPLH~Aa~~G~~~~~eiVklLL~~GAD~n~~D~~G~TPLhlAa~~g 170 (624)
||+||+.+|++++|++||+. |||+++. ++...|+|.+|+.+|. .+||++||.++.|+|..|-+|-|||-+|++
T Consensus 163 pLiWAaa~G~i~vV~fLL~~-GAdp~~l-gk~resALsLAt~ggy---tdiV~lLL~r~vdVNvyDwNGgTpLlyAvr-- 235 (296)
T KOG0502|consen 163 PLIWAAAKGHIPVVQFLLNS-GADPDAL-GKYRESALSLATRGGY---TDIVELLLTREVDVNVYDWNGGTPLLYAVR-- 235 (296)
T ss_pred HhHHHHhcCchHHHHHHHHc-CCChhhh-hhhhhhhHhHHhcCCh---HHHHHHHHhcCCCcceeccCCCceeeeeec--
Confidence 99999999999999999998 9999999 9999999999999999 999999999999999999999999999999
Q ss_pred ChhhHHHHHHHHHHCCCCCcccccccccccCCCCChhhhhhhcCC
Q 006947 171 KFQDVRLTLEELLATDGSVERNLRVSTTTSNSNSPPLSPALENGS 215 (624)
Q Consensus 171 ~~~~~~~lLe~LL~~gadv~~~~~l~~a~~~~g~TpL~lA~e~Gs 215 (624)
.++.+++|.|+..|+++. ..+..|.+++.+|+..|.
T Consensus 236 --gnhvkcve~Ll~sGAd~t-------~e~dsGy~~mdlAValGy 271 (296)
T KOG0502|consen 236 --GNHVKCVESLLNSGADVT-------QEDDSGYWIMDLAVALGY 271 (296)
T ss_pred --CChHHHHHHHHhcCCCcc-------cccccCCcHHHHHHHhhh
Confidence 677889999999999999 888999999999999884
No 36
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.79 E-value=1.3e-19 Score=188.10 Aligned_cols=154 Identities=27% Similarity=0.303 Sum_probs=137.2
Q ss_pred CcccCccChHHHHHHHHcCCHHHHHHHHhcCCCCCcccccccccccCCccccCCCCchHHHHHhc-----CCHHHHHHHH
Q 006947 34 LTVETDDAFASLLELAANNDVEGFKRSIVCDPSGVDEVGLWYGRQKGSKQMVNEQRTPLMVAATY-----GSIDIIRLIL 108 (624)
Q Consensus 34 ini~d~dg~TpLh~AA~~Gdle~Vk~LLe~~GadvN~~~l~~~~~~~~~~~D~~G~TPLhlAA~~-----G~~eiVklLL 108 (624)
||+-|.+|.|+||+++.++++++|+.||+..-++||.. ++-|+||+|+|+.. .+.++|..|.
T Consensus 261 VNlaDsNGNTALHYsVSHaNF~VV~~LLDSgvC~VD~q-------------NrAGYtpiMLaALA~lk~~~d~~vV~~LF 327 (452)
T KOG0514|consen 261 VNLADSNGNTALHYAVSHANFDVVSILLDSGVCDVDQQ-------------NRAGYTPVMLAALAKLKQPADRTVVERLF 327 (452)
T ss_pred hhhhcCCCCeeeeeeecccchHHHHHHhccCccccccc-------------ccccccHHHHHHHHhhcchhhHHHHHHHH
Confidence 68889999999999999999999999999777888877 58999999999863 5688999999
Q ss_pred HhcCCCccccCCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCCCcCCCCCcHHHHHhcCCChhhHHHHHHHHHHCC-C
Q 006947 109 SESGADVNLSCGNDKSTALHCAASGGALNAVDVVKLLLAAGADPNFVDAKGHHPVDVIVVPPKFQDVRLTLEELLATD-G 187 (624)
Q Consensus 109 ~~~GADVN~~~d~~G~TPLH~Aa~~G~~~~~eiVklLL~~GAD~n~~D~~G~TPLhlAa~~g~~~~~~~lLe~LL~~g-a 187 (624)
.. .|||++....|+|+|++|+..|+ +++|+.||..|||||.+|.+|-|+|++|+. .++++|+++||... .
T Consensus 328 ~m--gnVNaKAsQ~gQTALMLAVSHGr---~d~vk~LLacgAdVNiQDdDGSTALMCA~E----HGhkEivklLLA~p~c 398 (452)
T KOG0514|consen 328 KM--GDVNAKASQHGQTALMLAVSHGR---VDMVKALLACGADVNIQDDDGSTALMCAAE----HGHKEIVKLLLAVPSC 398 (452)
T ss_pred hc--cCcchhhhhhcchhhhhhhhcCc---HHHHHHHHHccCCCccccCCccHHHhhhhh----hChHHHHHHHhccCcc
Confidence 66 68999877889999999999999 999999999999999999999999999999 66778888888654 3
Q ss_pred CCcccccccccccCCCCChhhhhhhcCCC
Q 006947 188 SVERNLRVSTTTSNSNSPPLSPALENGSP 216 (624)
Q Consensus 188 dv~~~~~l~~a~~~~g~TpL~lA~e~Gs~ 216 (624)
++. ..+..|.|+|.+|++.|+.
T Consensus 399 d~s-------LtD~DgSTAl~IAleagh~ 420 (452)
T KOG0514|consen 399 DIS-------LTDVDGSTALSIALEAGHR 420 (452)
T ss_pred cce-------eecCCCchhhhhHHhcCch
Confidence 443 6788999999999999953
No 37
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.79 E-value=3.1e-19 Score=199.97 Aligned_cols=175 Identities=20% Similarity=0.242 Sum_probs=149.7
Q ss_pred cccCCCCcccCccChHHHHHHHHcCCHHHHHHHHhcCCCCCcccc--cccccccCCccccCCCCchHHHHHhcCCHHHHH
Q 006947 28 NVDMNHLTVETDDAFASLLELAANNDVEGFKRSIVCDPSGVDEVG--LWYGRQKGSKQMVNEQRTPLMVAATYGSIDIIR 105 (624)
Q Consensus 28 ~~d~~~ini~d~dg~TpLh~AA~~Gdle~Vk~LLe~~GadvN~~~--l~~~~~~~~~~~D~~G~TPLhlAA~~G~~eiVk 105 (624)
..+..+++..+.++.+|||.|+..||+++++.+|. .|..+..+. .....+--++..|.+|.||||+||..|+.+.|.
T Consensus 212 ~~r~~~in~~~n~~~~pLhlAve~g~~e~lk~~L~-n~~~~a~~~~~~~~q~kelv~~~d~dg~tpLH~a~r~G~~~svd 290 (929)
T KOG0510|consen 212 YERQTHINFDNNEKATPLHLAVEGGDIEMLKMCLQ-NGKKIADVQLDAMQQEKELVNDEDNDGCTPLHYAARQGGPESVD 290 (929)
T ss_pred chhhcccccccCCCCcchhhhhhcCCHHHHHHHHh-CccccchhhhHHHHHHHHHhhcccccCCchHHHHHHcCChhHHH
Confidence 34778899999999999999999999999999999 666654432 111222234667999999999999999999999
Q ss_pred HHHHhcCCCccccCCCCCChHHHHHHhCCCCChHHHHHHHHH-CC-CCCCCcCCCCCcHHHHHhcCCChhhHHHHHHHHH
Q 006947 106 LILSESGADVNLSCGNDKSTALHCAASGGALNAVDVVKLLLA-AG-ADPNFVDAKGHHPVDVIVVPPKFQDVRLTLEELL 183 (624)
Q Consensus 106 lLL~~~GADVN~~~d~~G~TPLH~Aa~~G~~~~~eiVklLL~-~G-AD~n~~D~~G~TPLhlAa~~g~~~~~~~lLe~LL 183 (624)
.||.. |+++|.+ +.++.||||.||..|+ ..+|+-||+ .| ...|..|..|+||||+|+. .++..+++.|+
T Consensus 291 ~Ll~~-Ga~I~~k-n~d~~spLH~AA~yg~---~ntv~rLL~~~~~rllne~D~~g~tpLHlaa~----~gH~~v~qlLl 361 (929)
T KOG0510|consen 291 NLLGF-GASINSK-NKDEESPLHFAAIYGR---INTVERLLQESDTRLLNESDLHGMTPLHLAAK----SGHDRVVQLLL 361 (929)
T ss_pred HHHHc-CCccccc-CCCCCCchHHHHHccc---HHHHHHHHhCcCccccccccccCCCchhhhhh----cCHHHHHHHHH
Confidence 99998 9999999 8999999999999999 999999999 44 5788999999999999998 77788999999
Q ss_pred HCCCCCcccccccccccCCCCChhhhhhhcCCC
Q 006947 184 ATDGSVERNLRVSTTTSNSNSPPLSPALENGSP 216 (624)
Q Consensus 184 ~~gadv~~~~~l~~a~~~~g~TpL~lA~e~Gs~ 216 (624)
+.|+.... ....+.+|.|+||+|+..|..
T Consensus 362 ~~GA~~~~----~~e~D~dg~TaLH~Aa~~g~~ 390 (929)
T KOG0510|consen 362 NKGALFLN----MSEADSDGNTALHLAAKYGNT 390 (929)
T ss_pred hcChhhhc----ccccccCCchhhhHHHHhccH
Confidence 99998872 113488999999999999954
No 38
>PHA02917 ankyrin-like protein; Provisional
Probab=99.79 E-value=9.2e-19 Score=201.67 Aligned_cols=172 Identities=12% Similarity=0.110 Sum_probs=130.5
Q ss_pred cCCCCcccCccChHHHHHHHHc---CCHHHHHHHHhcCCCCCcccc------cccccccC------------------Cc
Q 006947 30 DMNHLTVETDDAFASLLELAAN---NDVEGFKRSIVCDPSGVDEVG------LWYGRQKG------------------SK 82 (624)
Q Consensus 30 d~~~ini~d~dg~TpLh~AA~~---Gdle~Vk~LLe~~GadvN~~~------l~~~~~~~------------------~~ 82 (624)
+-..++..|.+|.|+||.||.. |+.++|+.||+ .|++++..+ +.+....+ .+
T Consensus 21 ~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~v~~Ll~-~ga~v~~~~~~g~TpL~~Aa~~g~~~v~~~~~~~Ll~~~~~~n 99 (661)
T PHA02917 21 DRDPNDTRNQFKNNALHAYLFNEHCNNVEVVKLLLD-SGTNPLHKNWRQLTPLEEYTNSRHVKVNKDIAMALLEATGYSN 99 (661)
T ss_pred ccCcccccCCCCCcHHHHHHHhhhcCcHHHHHHHHH-CCCCccccCCCCCCHHHHHHHcCChhHHHHHHHHHHhccCCCC
Confidence 4445567789999999997665 88999999998 999998663 00000000 01
Q ss_pred cccCCCCchHHHHHhcCCHHHHHHHHHhcCCCccccCCCCCChHHHHHH--hCCCCChHHHHHHHHHCCCCCCCcCC---
Q 006947 83 QMVNEQRTPLMVAATYGSIDIIRLILSESGADVNLSCGNDKSTALHCAA--SGGALNAVDVVKLLLAAGADPNFVDA--- 157 (624)
Q Consensus 83 ~~D~~G~TPLhlAA~~G~~eiVklLL~~~GADVN~~~d~~G~TPLH~Aa--~~G~~~~~eiVklLL~~GAD~n~~D~--- 157 (624)
. .+..+++|+|+..|+.++|++||++ |+|+|.+ +.+|.||||+|+ ..|+ .++|++||++|||++..|.
T Consensus 100 ~--~~~~~~~~~a~~~~~~e~vk~Ll~~-Gadin~~-d~~g~T~L~~~~a~~~~~---~eivklLi~~Ga~vn~~d~~~~ 172 (661)
T PHA02917 100 I--NDFNIFSYMKSKNVDVDLIKVLVEH-GFDLSVK-CENHRSVIENYVMTDDPV---PEIIDLFIENGCSVLYEDEDDE 172 (661)
T ss_pred C--CCcchHHHHHhhcCCHHHHHHHHHc-CCCCCcc-CCCCccHHHHHHHccCCC---HHHHHHHHHcCCCccccccccc
Confidence 0 1112445556666678899999988 9999999 999999999654 4688 9999999999999987654
Q ss_pred CC-----------CcHHHHHhcCCC-------hhhHHHHHHHHHHCCCCCcccccccccccCCCCChhhhhhhcCCC
Q 006947 158 KG-----------HHPVDVIVVPPK-------FQDVRLTLEELLATDGSVERNLRVSTTTSNSNSPPLSPALENGSP 216 (624)
Q Consensus 158 ~G-----------~TPLhlAa~~g~-------~~~~~~lLe~LL~~gadv~~~~~l~~a~~~~g~TpL~lA~e~Gs~ 216 (624)
.| .||||+|+..+. ..+..+++++|++.|++++ ..+..|.||||+|+.+|..
T Consensus 173 ~g~~~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gadvn-------~~d~~G~TpLh~A~~~g~~ 242 (661)
T PHA02917 173 YGYAYDDYQPRNCGTVLHLYIISHLYSESDTRAYVRPEVVKCLINHGIKPS-------SIDKNYCTALQYYIKSSHI 242 (661)
T ss_pred cccccccccccccccHHHHHHhhcccccccccccCcHHHHHHHHHCCCCcc-------cCCCCCCcHHHHHHHcCCC
Confidence 34 599999985210 1246789999999999999 8889999999999999953
No 39
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.78 E-value=5.8e-19 Score=166.84 Aligned_cols=144 Identities=15% Similarity=0.091 Sum_probs=112.9
Q ss_pred ccCCCCcccCccChHHHHHHHHcCCHHHHHHHHhcCCCCCcccccccccccCCccccCCCCchHHHHHhcCCHH---HHH
Q 006947 29 VDMNHLTVETDDAFASLLELAANNDVEGFKRSIVCDPSGVDEVGLWYGRQKGSKQMVNEQRTPLMVAATYGSID---IIR 105 (624)
Q Consensus 29 ~d~~~ini~d~dg~TpLh~AA~~Gdle~Vk~LLe~~GadvN~~~l~~~~~~~~~~~D~~G~TPLhlAA~~G~~e---iVk 105 (624)
.+....+..|.+|.||||+||..|++.. .++. .+...+... ......|.+|.||||+|+..|+.+ +++
T Consensus 5 ~~~~~~~~~d~~g~tpLh~A~~~g~~~~--l~~~-~~~~~~~~~------~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~ 75 (154)
T PHA02736 5 EEIIFASEPDIEGENILHYLCRNGGVTD--LLAF-KNAISDENR------YLVLEYNRHGKQCVHIVSNPDKADPQEKLK 75 (154)
T ss_pred chhhHHHhcCCCCCCHHHHHHHhCCHHH--HHHH-HHHhcchhH------HHHHHhcCCCCEEEEeecccCchhHHHHHH
Confidence 3444566778899999999999998533 2222 222111100 001233789999999999999874 688
Q ss_pred HHHHhcCCCccccCC-CCCChHHHHHHhCCCCChHHHHHHHHH-CCCCCCCcCCCCCcHHHHHhcCCChhhHHHHHHHHH
Q 006947 106 LILSESGADVNLSCG-NDKSTALHCAASGGALNAVDVVKLLLA-AGADPNFVDAKGHHPVDVIVVPPKFQDVRLTLEELL 183 (624)
Q Consensus 106 lLL~~~GADVN~~~d-~~G~TPLH~Aa~~G~~~~~eiVklLL~-~GAD~n~~D~~G~TPLhlAa~~g~~~~~~~lLe~LL 183 (624)
+|++. |+++|.+ + ..|.||||+|+..|+ .+++++|+. .|++++.+|..|+||||+|+. .+..+++++|+
T Consensus 76 ~Ll~~-gadin~~-~~~~g~T~Lh~A~~~~~---~~i~~~Ll~~~g~d~n~~~~~g~tpL~~A~~----~~~~~i~~~Ll 146 (154)
T PHA02736 76 LLMEW-GADINGK-ERVFGNTPLHIAVYTQN---YELATWLCNQPGVNMEILNYAFKTPYYVACE----RHDAKMMNILR 146 (154)
T ss_pred HHHHc-CCCcccc-CCCCCCcHHHHHHHhCC---HHHHHHHHhCCCCCCccccCCCCCHHHHHHH----cCCHHHHHHHH
Confidence 99988 9999998 6 589999999999999 999999998 499999999999999999998 45667888999
Q ss_pred HCCCCCc
Q 006947 184 ATDGSVE 190 (624)
Q Consensus 184 ~~gadv~ 190 (624)
+.|++.+
T Consensus 147 ~~ga~~~ 153 (154)
T PHA02736 147 AKGAQCK 153 (154)
T ss_pred HcCCCCC
Confidence 9988764
No 40
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.77 E-value=3.5e-19 Score=174.36 Aligned_cols=132 Identities=26% Similarity=0.291 Sum_probs=120.2
Q ss_pred ccCCCCcccCccChHHHHHHHHcCCHHHHHHHHhcCCCCCcccccccccccCCccccCCCCchHHHHHhcCCHHHHHHHH
Q 006947 29 VDMNHLTVETDDAFASLLELAANNDVEGFKRSIVCDPSGVDEVGLWYGRQKGSKQMVNEQRTPLMVAATYGSIDIIRLIL 108 (624)
Q Consensus 29 ~d~~~ini~d~dg~TpLh~AA~~Gdle~Vk~LLe~~GadvN~~~l~~~~~~~~~~~D~~G~TPLhlAA~~G~~eiVklLL 108 (624)
+..+-+|..|+.|+|||.+|+++|++++|+.||+ .|+|++..+ +...|+|++|+..|.++||++||
T Consensus 148 ~~~n~VN~~De~GfTpLiWAaa~G~i~vV~fLL~-~GAdp~~lg-------------k~resALsLAt~ggytdiV~lLL 213 (296)
T KOG0502|consen 148 LVNNKVNACDEFGFTPLIWAAAKGHIPVVQFLLN-SGADPDALG-------------KYRESALSLATRGGYTDIVELLL 213 (296)
T ss_pred HhhccccCccccCchHhHHHHhcCchHHHHHHHH-cCCChhhhh-------------hhhhhhHhHHhcCChHHHHHHHH
Confidence 3556788999999999999999999999999999 999999884 77789999999999999999999
Q ss_pred HhcCCCccccCCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCCCcCCCCCcHHHHHhcCCChhhHHHHHH
Q 006947 109 SESGADVNLSCGNDKSTALHCAASGGALNAVDVVKLLLAAGADPNFVDAKGHHPVDVIVVPPKFQDVRLTLE 180 (624)
Q Consensus 109 ~~~GADVN~~~d~~G~TPLH~Aa~~G~~~~~eiVklLL~~GAD~n~~D~~G~TPLhlAa~~g~~~~~~~lLe 180 (624)
.. +.|||.. |.+|-|||-+|++++| ++||+.||..|||++..|..|.+++++|+..|.- .++.+++
T Consensus 214 ~r-~vdVNvy-DwNGgTpLlyAvrgnh---vkcve~Ll~sGAd~t~e~dsGy~~mdlAValGyr-~Vqqvie 279 (296)
T KOG0502|consen 214 TR-EVDVNVY-DWNGGTPLLYAVRGNH---VKCVESLLNSGADVTQEDDSGYWIMDLAVALGYR-IVQQVIE 279 (296)
T ss_pred hc-CCCccee-ccCCCceeeeeecCCh---HHHHHHHHhcCCCcccccccCCcHHHHHHHhhhH-HHHHHHH
Confidence 98 9999998 9999999999999999 9999999999999999999999999999996544 3334443
No 41
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.77 E-value=2.8e-18 Score=202.85 Aligned_cols=146 Identities=21% Similarity=0.264 Sum_probs=98.6
Q ss_pred cChHHHHHHHHcCCHHHHHHHHhcCCCCCcccccccccccCCccccCCCCchHHHHHhcCCHHHHHHHHHhcCCCccccC
Q 006947 40 DAFASLLELAANNDVEGFKRSIVCDPSGVDEVGLWYGRQKGSKQMVNEQRTPLMVAATYGSIDIIRLILSESGADVNLSC 119 (624)
Q Consensus 40 dg~TpLh~AA~~Gdle~Vk~LLe~~GadvN~~~l~~~~~~~~~~~D~~G~TPLhlAA~~G~~eiVklLL~~~GADVN~~~ 119 (624)
+..++|+.||..|+.+.++.|++ .|+|+|.. |.+|+||||+||..|+.++|++||++ |+|+|.+
T Consensus 524 ~~~~~L~~Aa~~g~~~~l~~Ll~-~G~d~n~~-------------d~~G~TpLh~Aa~~g~~~~v~~Ll~~-gadin~~- 587 (823)
T PLN03192 524 NMASNLLTVASTGNAALLEELLK-AKLDPDIG-------------DSKGRTPLHIAASKGYEDCVLVLLKH-ACNVHIR- 587 (823)
T ss_pred cchhHHHHHHHcCCHHHHHHHHH-CCCCCCCC-------------CCCCCCHHHHHHHcChHHHHHHHHhc-CCCCCCc-
Confidence 44566666666777766666666 66666655 46666666666666666666666666 6666666
Q ss_pred CCCCChHHHHHHhCCCC----------------------------ChHHHHHHHHHCCCCCCCcCCCCCcHHHHHhcCCC
Q 006947 120 GNDKSTALHCAASGGAL----------------------------NAVDVVKLLLAAGADPNFVDAKGHHPVDVIVVPPK 171 (624)
Q Consensus 120 d~~G~TPLH~Aa~~G~~----------------------------~~~eiVklLL~~GAD~n~~D~~G~TPLhlAa~~g~ 171 (624)
|.+|.||||+|+..|+. +..+++++|+++|+|+|.+|.+|+||||+|+.
T Consensus 588 d~~G~TpL~~A~~~g~~~iv~~L~~~~~~~~~~~~~~~L~~Aa~~g~~~~v~~Ll~~Gadin~~d~~G~TpLh~A~~--- 664 (823)
T PLN03192 588 DANGNTALWNAISAKHHKIFRILYHFASISDPHAAGDLLCTAAKRNDLTAMKELLKQGLNVDSEDHQGATALQVAMA--- 664 (823)
T ss_pred CCCCCCHHHHHHHhCCHHHHHHHHhcCcccCcccCchHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH---
Confidence 66666666655544440 00666777778888888888888888888887
Q ss_pred hhhHHHHHHHHHHCCCCCcccccccccccCCC-CChhhhhhh
Q 006947 172 FQDVRLTLEELLATDGSVERNLRVSTTTSNSN-SPPLSPALE 212 (624)
Q Consensus 172 ~~~~~~lLe~LL~~gadv~~~~~l~~a~~~~g-~TpL~lA~e 212 (624)
.+..+++++|+++|++++ ..+..| .+|+.++..
T Consensus 665 -~g~~~iv~~Ll~~GAdv~-------~~~~~g~~t~~~l~~~ 698 (823)
T PLN03192 665 -EDHVDMVRLLIMNGADVD-------KANTDDDFSPTELREL 698 (823)
T ss_pred -CCcHHHHHHHHHcCCCCC-------CCCCCCCCCHHHHHHH
Confidence 556677888888888877 444444 677766543
No 42
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.76 E-value=9e-19 Score=196.28 Aligned_cols=147 Identities=21% Similarity=0.271 Sum_probs=131.7
Q ss_pred CcccCccChHHHHHHHHcCCHHHHHHHHhcCCCCCcccccccccccCCccccCCCCchHHHHHhcCCHHHHHHHHH-hcC
Q 006947 34 LTVETDDAFASLLELAANNDVEGFKRSIVCDPSGVDEVGLWYGRQKGSKQMVNEQRTPLMVAATYGSIDIIRLILS-ESG 112 (624)
Q Consensus 34 ini~d~dg~TpLh~AA~~Gdle~Vk~LLe~~GadvN~~~l~~~~~~~~~~~D~~G~TPLhlAA~~G~~eiVklLL~-~~G 112 (624)
++-+|.+|+||||+||..|..+.|..|+. .|++++.+ ..++.||||.||.+|++++|+-||+ ..-
T Consensus 266 v~~~d~dg~tpLH~a~r~G~~~svd~Ll~-~Ga~I~~k-------------n~d~~spLH~AA~yg~~ntv~rLL~~~~~ 331 (929)
T KOG0510|consen 266 VNDEDNDGCTPLHYAARQGGPESVDNLLG-FGASINSK-------------NKDEESPLHFAAIYGRINTVERLLQESDT 331 (929)
T ss_pred hhcccccCCchHHHHHHcCChhHHHHHHH-cCCccccc-------------CCCCCCchHHHHHcccHHHHHHHHhCcCc
Confidence 56679999999999999999999999999 99999988 4899999999999999999999998 433
Q ss_pred CCccccCCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCC---CcCCCCCcHHHHHhcCCChhhHHHHHHHHHHCCCCC
Q 006947 113 ADVNLSCGNDKSTALHCAASGGALNAVDVVKLLLAAGADPN---FVDAKGHHPVDVIVVPPKFQDVRLTLEELLATDGSV 189 (624)
Q Consensus 113 ADVN~~~d~~G~TPLH~Aa~~G~~~~~eiVklLL~~GAD~n---~~D~~G~TPLhlAa~~g~~~~~~~lLe~LL~~gadv 189 (624)
...|.. |-.|.||||+|+..|| ..+|++||+.||+.. ..|.+|+||||+|+. ++...++++|+.+|+++
T Consensus 332 rllne~-D~~g~tpLHlaa~~gH---~~v~qlLl~~GA~~~~~~e~D~dg~TaLH~Aa~----~g~~~av~~Li~~Ga~I 403 (929)
T KOG0510|consen 332 RLLNES-DLHGMTPLHLAAKSGH---DRVVQLLLNKGALFLNMSEADSDGNTALHLAAK----YGNTSAVQKLISHGADI 403 (929)
T ss_pred cccccc-cccCCCchhhhhhcCH---HHHHHHHHhcChhhhcccccccCCchhhhHHHH----hccHHHHHHHHHcCCce
Confidence 567777 8899999999999999 999999999999887 569999999999999 77788999999999999
Q ss_pred cccccccccccCCCCChhhh
Q 006947 190 ERNLRVSTTTSNSNSPPLSP 209 (624)
Q Consensus 190 ~~~~~l~~a~~~~g~TpL~l 209 (624)
. ..+..|.+++++
T Consensus 404 ~-------~~n~~g~SA~~~ 416 (929)
T KOG0510|consen 404 G-------VKNKKGKSAFDT 416 (929)
T ss_pred e-------eccccccccccc
Confidence 7 566666666665
No 43
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.76 E-value=5.5e-18 Score=200.36 Aligned_cols=119 Identities=22% Similarity=0.307 Sum_probs=106.5
Q ss_pred cCCCCchHHHHHhcCCHHHHHHHHHhcCCCccccCCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCCCcCCCCCcHHH
Q 006947 85 VNEQRTPLMVAATYGSIDIIRLILSESGADVNLSCGNDKSTALHCAASGGALNAVDVVKLLLAAGADPNFVDAKGHHPVD 164 (624)
Q Consensus 85 D~~G~TPLhlAA~~G~~eiVklLL~~~GADVN~~~d~~G~TPLH~Aa~~G~~~~~eiVklLL~~GAD~n~~D~~G~TPLh 164 (624)
+.++.++||.||..|+.++++.||+. |+|+|.. |.+|.||||+||..|+ .++|++|+++|+|+|.+|.+|+||||
T Consensus 522 ~~~~~~~L~~Aa~~g~~~~l~~Ll~~-G~d~n~~-d~~G~TpLh~Aa~~g~---~~~v~~Ll~~gadin~~d~~G~TpL~ 596 (823)
T PLN03192 522 DPNMASNLLTVASTGNAALLEELLKA-KLDPDIG-DSKGRTPLHIAASKGY---EDCVLVLLKHACNVHIRDANGNTALW 596 (823)
T ss_pred CccchhHHHHHHHcCCHHHHHHHHHC-CCCCCCC-CCCCCCHHHHHHHcCh---HHHHHHHHhcCCCCCCcCCCCCCHHH
Confidence 34567999999999999999999988 9999999 9999999999999999 99999999999999999999999999
Q ss_pred HHhcCCChhhHH---------------------------HHHHHHHHCCCCCcccccccccccCCCCChhhhhhhcCC
Q 006947 165 VIVVPPKFQDVR---------------------------LTLEELLATDGSVERNLRVSTTTSNSNSPPLSPALENGS 215 (624)
Q Consensus 165 lAa~~g~~~~~~---------------------------~lLe~LL~~gadv~~~~~l~~a~~~~g~TpL~lA~e~Gs 215 (624)
+|+..|+...++ ++++.|+++|++++ ..+..|.||||+|+.+|.
T Consensus 597 ~A~~~g~~~iv~~L~~~~~~~~~~~~~~~L~~Aa~~g~~~~v~~Ll~~Gadin-------~~d~~G~TpLh~A~~~g~ 667 (823)
T PLN03192 597 NAISAKHHKIFRILYHFASISDPHAAGDLLCTAAKRNDLTAMKELLKQGLNVD-------SEDHQGATALQVAMAEDH 667 (823)
T ss_pred HHHHhCCHHHHHHHHhcCcccCcccCchHHHHHHHhCCHHHHHHHHHCCCCCC-------CCCCCCCCHHHHHHHCCc
Confidence 999877765443 45677888888887 778899999999998884
No 44
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.75 E-value=7.4e-18 Score=160.03 Aligned_cols=147 Identities=27% Similarity=0.255 Sum_probs=126.2
Q ss_pred cChHHHHHHHHcCCHHHHHHHHhcCCCCCcccccccccccCCccccCCCCchHHHHHhcCCHHHHHHHHHhcCCCccccC
Q 006947 40 DAFASLLELAANNDVEGFKRSIVCDPSGVDEVGLWYGRQKGSKQMVNEQRTPLMVAATYGSIDIIRLILSESGADVNLSC 119 (624)
Q Consensus 40 dg~TpLh~AA~~Gdle~Vk~LLe~~GadvN~~~l~~~~~~~~~~~D~~G~TPLhlAA~~G~~eiVklLL~~~GADVN~~~ 119 (624)
+-...+++|+..+.+..|+.||++..-.||.+ |.+|+||||-|+.+|+++||+.||.. ||+++.+
T Consensus 62 dp~rl~lwaae~nrl~eV~~lL~e~an~vNtr-------------D~D~YTpLHRAaYn~h~div~~ll~~-gAn~~a~- 126 (228)
T KOG0512|consen 62 DPIRLLLWAAEKNRLTEVQRLLSEKANHVNTR-------------DEDEYTPLHRAAYNGHLDIVHELLLS-GANKEAK- 126 (228)
T ss_pred CHHHHHHHHHhhccHHHHHHHHHhcccccccc-------------ccccccHHHHHHhcCchHHHHHHHHc-cCCcccc-
Confidence 34467899999999999999999777777876 79999999999999999999999988 9999999
Q ss_pred CCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCCCcCCCCCcHHHHHhcCCChhhHHHHHHHHHHC-CCCCccccccccc
Q 006947 120 GNDKSTALHCAASGGALNAVDVVKLLLAAGADPNFVDAKGHHPVDVIVVPPKFQDVRLTLEELLAT-DGSVERNLRVSTT 198 (624)
Q Consensus 120 d~~G~TPLH~Aa~~G~~~~~eiVklLL~~GAD~n~~D~~G~TPLhlAa~~g~~~~~~~lLe~LL~~-gadv~~~~~l~~a 198 (624)
...||||||-||.-.+ .+++.+||++|||||+......||||+|+.. ...+..+++|+.. +.... .
T Consensus 127 T~~GWTPLhSAckWnN---~~va~~LLqhgaDVnA~t~g~ltpLhlaa~~---rn~r~t~~~Ll~dryi~pg-------~ 193 (228)
T KOG0512|consen 127 TNEGWTPLHSACKWNN---FEVAGRLLQHGADVNAQTKGLLTPLHLAAGN---RNSRDTLELLLHDRYIHPG-------L 193 (228)
T ss_pred cccCccchhhhhcccc---hhHHHHHHhccCcccccccccchhhHHhhcc---cchHHHHHHHhhccccChh-------h
Confidence 9999999999999888 9999999999999999999999999999974 3455666666643 32332 5
Q ss_pred ccCCCCChhhhhhhcC
Q 006947 199 TSNSNSPPLSPALENG 214 (624)
Q Consensus 199 ~~~~g~TpL~lA~e~G 214 (624)
..+.+.|++.+|-+.|
T Consensus 194 ~nn~eeta~~iARRT~ 209 (228)
T KOG0512|consen 194 KNNLEETAFDIARRTS 209 (228)
T ss_pred hcCccchHHHHHHHhh
Confidence 6677889998887765
No 45
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.74 E-value=1.3e-17 Score=174.91 Aligned_cols=121 Identities=20% Similarity=0.205 Sum_probs=104.7
Q ss_pred cccCccChHH-HHHHHHcCCHHHHHHHHhcCCCCCcccccccccccCCccccCCCCchHHHHHhcCCHHHHHHHHHhcCC
Q 006947 35 TVETDDAFAS-LLELAANNDVEGFKRSIVCDPSGVDEVGLWYGRQKGSKQMVNEQRTPLMVAATYGSIDIIRLILSESGA 113 (624)
Q Consensus 35 ni~d~dg~Tp-Lh~AA~~Gdle~Vk~LLe~~GadvN~~~l~~~~~~~~~~~D~~G~TPLhlAA~~G~~eiVklLL~~~GA 113 (624)
..+|+++.++ ||.|+..|+.++++.||+ .|+++|..+. ..+..|.||||+|+..|+.+++++|+++ ||
T Consensus 26 ~~~d~~~~~~lL~~A~~~~~~eivk~LL~-~GAdiN~~~~---------~sd~~g~TpLh~Aa~~~~~eivklLL~~-GA 94 (300)
T PHA02884 26 KKKNKICIANILYSSIKFHYTDIIDAILK-LGADPEAPFP---------LSENSKTNPLIYAIDCDNDDAAKLLIRY-GA 94 (300)
T ss_pred hccCcCCCCHHHHHHHHcCCHHHHHHHHH-CCCCccccCc---------ccCCCCCCHHHHHHHcCCHHHHHHHHHc-CC
Confidence 4566677665 555566689999999999 9999997620 0146899999999999999999999998 99
Q ss_pred CccccCCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCCCcCCCCCcHHHHHhcC
Q 006947 114 DVNLSCGNDKSTALHCAASGGALNAVDVVKLLLAAGADPNFVDAKGHHPVDVIVVP 169 (624)
Q Consensus 114 DVN~~~d~~G~TPLH~Aa~~G~~~~~eiVklLL~~GAD~n~~D~~G~TPLhlAa~~ 169 (624)
|+|.+.+..|.||||+|+..|+ .+++++|+.+|||++.+|..|.||||+|+..
T Consensus 95 DVN~~~~~~g~TpLh~Aa~~~~---~eivklLL~~GAdin~kd~~G~TpL~~A~~~ 147 (300)
T PHA02884 95 DVNRYAEEAKITPLYISVLHGC---LKCLEILLSYGADINIQTNDMVTPIELALMI 147 (300)
T ss_pred CcCcccCCCCCCHHHHHHHcCC---HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHh
Confidence 9998635679999999999999 9999999999999999999999999999974
No 46
>PHA02795 ankyrin-like protein; Provisional
Probab=99.73 E-value=3.5e-17 Score=178.62 Aligned_cols=139 Identities=19% Similarity=0.102 Sum_probs=120.3
Q ss_pred ccChHHHHHHHHcCCHHHHHHHHhcCCCCCcccccccccccCCccccCCCCchHHHHHhcCCHHHHHHHHHhcCCCcccc
Q 006947 39 DDAFASLLELAANNDVEGFKRSIVCDPSGVDEVGLWYGRQKGSKQMVNEQRTPLMVAATYGSIDIIRLILSESGADVNLS 118 (624)
Q Consensus 39 ~dg~TpLh~AA~~Gdle~Vk~LLe~~GadvN~~~l~~~~~~~~~~~D~~G~TPLhlAA~~G~~eiVklLL~~~GADVN~~ 118 (624)
.++.|+||.|+..|+.++++.|+. .|++.+... .....+..|.|++|.|+..++.+++++|+++ |||+|.+
T Consensus 147 ~~~~t~lh~A~~~~~~eIVk~Lls-~Ga~~~n~~-------~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~-GADIN~k 217 (437)
T PHA02795 147 IECLNAYFRGICKKESSVVEFILN-CGIPDENDV-------KLDLYKIIQYTRGFLVDEPTVLEIYKLCIPY-IEDINQL 217 (437)
T ss_pred CCCCCHHHHHHHcCcHHHHHHHHh-cCCcccccc-------cchhhhhhccchhHHHHhcCHHHHHHHHHhC-cCCcCcC
Confidence 456899999999999999999999 787543221 0111124578999999999999999999998 9999999
Q ss_pred CCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCCCcCCCCCcHHHHHhcCCCh----hhHHHHHHHHHHCCCCCc
Q 006947 119 CGNDKSTALHCAASGGALNAVDVVKLLLAAGADPNFVDAKGHHPVDVIVVPPKF----QDVRLTLEELLATDGSVE 190 (624)
Q Consensus 119 ~d~~G~TPLH~Aa~~G~~~~~eiVklLL~~GAD~n~~D~~G~TPLhlAa~~g~~----~~~~~lLe~LL~~gadv~ 190 (624)
+.+|.||||+|+..|+ .++|++|+++|||++.+|..|+||||+|+..|+. ....+++++|+++|++++
T Consensus 218 -D~~G~TpLh~Aa~~g~---~eiVelLL~~GAdIN~~d~~G~TpLh~Aa~~g~~~~~~~~~~eIvelLL~~gadI~ 289 (437)
T PHA02795 218 -DAGGRTLLYRAIYAGY---IDLVSWLLENGANVNAVMSNGYTCLDVAVDRGSVIARRETHLKILEILLREPLSID 289 (437)
T ss_pred -CCCCCCHHHHHHHcCC---HHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCcccccccHHHHHHHHHhCCCCCC
Confidence 9999999999999999 9999999999999999999999999999997642 346789999999999887
No 47
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.71 E-value=2.2e-17 Score=194.66 Aligned_cols=154 Identities=27% Similarity=0.310 Sum_probs=109.8
Q ss_pred CCcccCccChHHHHHHHHcCCHHHHHHHHhcCCCCCcccccccccccCCccccCCCCchHHHHHhcCCHHHHHHHHHhcC
Q 006947 33 HLTVETDDAFASLLELAANNDVEGFKRSIVCDPSGVDEVGLWYGRQKGSKQMVNEQRTPLMVAATYGSIDIIRLILSESG 112 (624)
Q Consensus 33 ~ini~d~dg~TpLh~AA~~Gdle~Vk~LLe~~GadvN~~~l~~~~~~~~~~~D~~G~TPLhlAA~~G~~eiVklLL~~~G 112 (624)
++++...+|+|+||.|+..|+.+.++.|++ .++.++.. .+.|-|+||+|+..+.+.+++.++++ |
T Consensus 466 ~~n~~s~~G~T~Lhlaaq~Gh~~~~~llle-~~~~~~~~-------------~~~~l~~lhla~~~~~v~~~~~l~~~-g 530 (1143)
T KOG4177|consen 466 DPNAVSKQGFTPLHLAAQEGHTEVVQLLLE-GGANDNLD-------------AKKGLTPLHLAADEDTVKVAKILLEH-G 530 (1143)
T ss_pred CcchhccccCcchhhhhccCCchHHHHhhh-cCCccCcc-------------chhccchhhhhhhhhhHHHHHHHhhc-C
Confidence 344444444444444444444444444444 33222221 24555666666666666666666666 7
Q ss_pred CCccccCCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCCCcCCCCCcHHHHHhcCCChhhHHHHHHHHHHCCCCCccc
Q 006947 113 ADVNLSCGNDKSTALHCAASGGALNAVDVVKLLLAAGADPNFVDAKGHHPVDVIVVPPKFQDVRLTLEELLATDGSVERN 192 (624)
Q Consensus 113 ADVN~~~d~~G~TPLH~Aa~~G~~~~~eiVklLL~~GAD~n~~D~~G~TPLhlAa~~g~~~~~~~lLe~LL~~gadv~~~ 192 (624)
++++.+ +.+|.||||.|+..|+ +++|++||++|||++.+|+.|+||||.|+. .+..+++++|+++|++++
T Consensus 531 a~v~~~-~~r~~TpLh~A~~~g~---v~~VkfLLe~gAdv~ak~~~G~TPLH~Aa~----~G~~~i~~LLlk~GA~vn-- 600 (1143)
T KOG4177|consen 531 ANVDLR-TGRGYTPLHVAVHYGN---VDLVKFLLEHGADVNAKDKLGYTPLHQAAQ----QGHNDIAELLLKHGASVN-- 600 (1143)
T ss_pred Cceehh-cccccchHHHHHhcCC---chHHHHhhhCCccccccCCCCCChhhHHHH----cChHHHHHHHHHcCCCCC--
Confidence 888888 8888899999999888 889999999999999999889999999988 557788888888998888
Q ss_pred ccccccccCCCCChhhhhhhcCCC
Q 006947 193 LRVSTTTSNSNSPPLSPALENGSP 216 (624)
Q Consensus 193 ~~l~~a~~~~g~TpL~lA~e~Gs~ 216 (624)
+.+..|.|||++|++.|..
T Consensus 601 -----a~d~~g~TpL~iA~~lg~~ 619 (1143)
T KOG4177|consen 601 -----AADLDGFTPLHIAVRLGYL 619 (1143)
T ss_pred -----cccccCcchhHHHHHhccc
Confidence 7888888999998888854
No 48
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.71 E-value=2.9e-17 Score=192.15 Aligned_cols=181 Identities=18% Similarity=0.132 Sum_probs=137.4
Q ss_pred CCCCcccCccChHHHH-HHHHcCCHHHHHHHHhcCCC--CCcccccccccc---------------cC------------
Q 006947 31 MNHLTVETDDAFASLL-ELAANNDVEGFKRSIVCDPS--GVDEVGLWYGRQ---------------KG------------ 80 (624)
Q Consensus 31 ~~~ini~d~dg~TpLh-~AA~~Gdle~Vk~LLe~~Ga--dvN~~~l~~~~~---------------~~------------ 80 (624)
..+++..|..|.|||| .|+.+++.++++.|++ .|+ +.....+..... .+
T Consensus 42 ~~~in~~d~~G~t~Lh~~A~~~~~~eiv~lLl~-~g~~~~~G~T~Lh~A~~~~~~~v~~ll~~l~~~~~~~~~~~~~~~~ 120 (743)
T TIGR00870 42 KLNINCPDRLGRSALFVAAIENENLELTELLLN-LSCRGAVGDTLLHAISLEYVDAVEAILLHLLAAFRKSGPLELANDQ 120 (743)
T ss_pred ccCCCCcCccchhHHHHHHHhcChHHHHHHHHh-CCCCCCcChHHHHHHHhccHHHHHHHHHHHhhcccccCchhhhccc
Confidence 4567888899999999 7888888899988888 664 111110111000 00
Q ss_pred CccccCCCCchHHHHHhcCCHHHHHHHHHhcCCCccccCC-------------CCCChHHHHHHhCCCCChHHHHHHHHH
Q 006947 81 SKQMVNEQRTPLMVAATYGSIDIIRLILSESGADVNLSCG-------------NDKSTALHCAASGGALNAVDVVKLLLA 147 (624)
Q Consensus 81 ~~~~D~~G~TPLhlAA~~G~~eiVklLL~~~GADVN~~~d-------------~~G~TPLH~Aa~~G~~~~~eiVklLL~ 147 (624)
.......|.||||+||..|+.++|++||++ |||+|.++. ..|.||||+|+..|+ .+++++|++
T Consensus 121 ~~~~~~~G~TpLhlAa~~~~~eiVklLL~~-GAdv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~---~~iv~lLl~ 196 (743)
T TIGR00870 121 YTSEFTPGITALHLAAHRQNYEIVKLLLER-GASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGS---PSIVALLSE 196 (743)
T ss_pred cccccCCCCcHHHHHHHhCCHHHHHHHHhC-CCCCCcCcCCchhhcCCCCCcccccccHHHHHHHhCC---HHHHHHHhc
Confidence 011234699999999999999999999998 999997632 258999999999999 999999999
Q ss_pred CCCCCCCcCCCCCcHHHHHhcCCC-----hhhHHHHHHHHHHCCCCCcccccccccccCCCCChhhhhhhcCCC
Q 006947 148 AGADPNFVDAKGHHPVDVIVVPPK-----FQDVRLTLEELLATDGSVERNLRVSTTTSNSNSPPLSPALENGSP 216 (624)
Q Consensus 148 ~GAD~n~~D~~G~TPLhlAa~~g~-----~~~~~~lLe~LL~~gadv~~~~~l~~a~~~~g~TpL~lA~e~Gs~ 216 (624)
+|+|++.+|..|+||||+|+..+. ......+.+.++..++.......+....+..|.|||++|++.|..
T Consensus 197 ~gadin~~d~~g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~~~~~~~el~~i~N~~g~TPL~~A~~~g~~ 270 (743)
T TIGR00870 197 DPADILTADSLGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDKLRDSKELEVILNHQGLTPLKLAAKEGRI 270 (743)
T ss_pred CCcchhhHhhhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCChHhhhhhcCCCCCCchhhhhhcCCc
Confidence 999999999999999999998542 223445666777776665544444457788999999999999954
No 49
>PHA02917 ankyrin-like protein; Provisional
Probab=99.71 E-value=7.8e-17 Score=185.79 Aligned_cols=173 Identities=13% Similarity=0.045 Sum_probs=129.4
Q ss_pred cccCCCCcccCccChHHHHHHHHcCCHH----HHHHHHhcCC-CCCcc----------------cccccccccCCccccC
Q 006947 28 NVDMNHLTVETDDAFASLLELAANNDVE----GFKRSIVCDP-SGVDE----------------VGLWYGRQKGSKQMVN 86 (624)
Q Consensus 28 ~~d~~~ini~d~dg~TpLh~AA~~Gdle----~Vk~LLe~~G-advN~----------------~~l~~~~~~~~~~~D~ 86 (624)
.....+++.++.+|.||||+|+..|+++ +++.|++..| ++++. +.+++..+.+.+..|.
T Consensus 55 l~~ga~v~~~~~~g~TpL~~Aa~~g~~~v~~~~~~~Ll~~~~~~n~~~~~~~~~~a~~~~~~e~vk~Ll~~Gadin~~d~ 134 (661)
T PHA02917 55 LDSGTNPLHKNWRQLTPLEEYTNSRHVKVNKDIAMALLEATGYSNINDFNIFSYMKSKNVDVDLIKVLVEHGFDLSVKCE 134 (661)
T ss_pred HHCCCCccccCCCCCCHHHHHHHcCChhHHHHHHHHHHhccCCCCCCCcchHHHHHhhcCCHHHHHHHHHcCCCCCccCC
Confidence 3455677788888999999999998854 4466776334 23332 2255667888888899
Q ss_pred CCCchHHHHH--hcCCHHHHHHHHHhcCCCccccCCC---CC-----------ChHHHHHHh-----------CCCCChH
Q 006947 87 EQRTPLMVAA--TYGSIDIIRLILSESGADVNLSCGN---DK-----------STALHCAAS-----------GGALNAV 139 (624)
Q Consensus 87 ~G~TPLhlAA--~~G~~eiVklLL~~~GADVN~~~d~---~G-----------~TPLH~Aa~-----------~G~~~~~ 139 (624)
+|+||||+|+ ..|+.++|++||++ ||++|.. +. .| .||||+|+. .++ .
T Consensus 135 ~g~T~L~~~~a~~~~~~eivklLi~~-Ga~vn~~-d~~~~~g~~~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~---~ 209 (661)
T PHA02917 135 NHRSVIENYVMTDDPVPEIIDLFIEN-GCSVLYE-DEDDEYGYAYDDYQPRNCGTVLHLYIISHLYSESDTRAYVR---P 209 (661)
T ss_pred CCccHHHHHHHccCCCHHHHHHHHHc-CCCcccc-ccccccccccccccccccccHHHHHHhhcccccccccccCc---H
Confidence 9999999654 57899999999999 9999865 32 34 599999986 456 9
Q ss_pred HHHHHHHHCCCCCCCcCCCCCcHHHHHhcCCChhhHHHHHHHHHHCCCCCcccccccccccCCCCChhhhhh
Q 006947 140 DVVKLLLAAGADPNFVDAKGHHPVDVIVVPPKFQDVRLTLEELLATDGSVERNLRVSTTTSNSNSPPLSPAL 211 (624)
Q Consensus 140 eiVklLL~~GAD~n~~D~~G~TPLhlAa~~g~~~~~~~lLe~LL~~gadv~~~~~l~~a~~~~g~TpL~lA~ 211 (624)
++|++|+++|||+|.+|.+|+||||+|+..|+.. .+++++|++ |+++.. .....+..+.+++++++
T Consensus 210 eiv~~Li~~Gadvn~~d~~G~TpLh~A~~~g~~~--~eivk~Li~-g~d~~~---~~~~~~~~~~~~~~~a~ 275 (661)
T PHA02917 210 EVVKCLINHGIKPSSIDKNYCTALQYYIKSSHID--IDIVKLLMK-GIDNTA---YSYIDDLTCCTRGIMAD 275 (661)
T ss_pred HHHHHHHHCCCCcccCCCCCCcHHHHHHHcCCCc--HHHHHHHHh-CCcccc---cccccCcccccchHHHH
Confidence 9999999999999999999999999999966543 578888875 766541 12233444555555555
No 50
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.70 E-value=6.2e-17 Score=163.80 Aligned_cols=137 Identities=28% Similarity=0.287 Sum_probs=122.2
Q ss_pred CCCCcccCccChHHHHHHHHcCCHHHHHHHHhcCCCCCcccccccccccCCccccCCCCchHHHHHhcCCHHHHHHHHHh
Q 006947 31 MNHLTVETDDAFASLLELAANNDVEGFKRSIVCDPSGVDEVGLWYGRQKGSKQMVNEQRTPLMVAATYGSIDIIRLILSE 110 (624)
Q Consensus 31 ~~~ini~d~dg~TpLh~AA~~Gdle~Vk~LLe~~GadvN~~~l~~~~~~~~~~~D~~G~TPLhlAA~~G~~eiVklLL~~ 110 (624)
-.++|.-|+.|++|||+||+.|+..+|+.||. +|+.||..+ .-..||||+||..||-+||+.||+.
T Consensus 24 ehdln~gddhgfsplhwaakegh~aivemll~-rgarvn~tn-------------mgddtplhlaaahghrdivqkll~~ 89 (448)
T KOG0195|consen 24 EHDLNVGDDHGFSPLHWAAKEGHVAIVEMLLS-RGARVNSTN-------------MGDDTPLHLAAAHGHRDIVQKLLSR 89 (448)
T ss_pred ccccccccccCcchhhhhhhcccHHHHHHHHh-ccccccccc-------------CCCCcchhhhhhcccHHHHHHHHHH
Confidence 45788899999999999999999999999999 999999874 4456999999999999999999998
Q ss_pred cCCCccccCCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCCCcCCCCCcHHHHHhcCCChhhHHHHHHHHHHCCCCCc
Q 006947 111 SGADVNLSCGNDKSTALHCAASGGALNAVDVVKLLLAAGADPNFVDAKGHHPVDVIVVPPKFQDVRLTLEELLATDGSVE 190 (624)
Q Consensus 111 ~GADVN~~~d~~G~TPLH~Aa~~G~~~~~eiVklLL~~GAD~n~~D~~G~TPLhlAa~~g~~~~~~~lLe~LL~~gadv~ 190 (624)
.+|||+. +..|.|||||||.-|. ..+.+-|+..||-++..++.|.|||+.|-. .....+.+.--+.|..++
T Consensus 90 -kadvnav-nehgntplhyacfwgy---dqiaedli~~ga~v~icnk~g~tpldkakp----~l~~~l~e~aek~gq~~n 160 (448)
T KOG0195|consen 90 -KADVNAV-NEHGNTPLHYACFWGY---DQIAEDLISCGAAVNICNKKGMTPLDKAKP----MLKNTLLEIAEKHGQSPN 160 (448)
T ss_pred -hcccchh-hccCCCchhhhhhhcH---HHHHHHHHhccceeeecccCCCCchhhhch----HHHHHHHHHHHHhCCCCC
Confidence 8999999 9999999999999999 899999999999999999999999999865 445555566666777665
No 51
>PHA02741 hypothetical protein; Provisional
Probab=99.69 E-value=1.1e-16 Score=154.13 Aligned_cols=119 Identities=21% Similarity=0.245 Sum_probs=103.1
Q ss_pred cCCCCchHHHHHhcCCHHHHHHHHHh-----cCCCccccCCCCCChHHHHHHhCCCCC-hHHHHHHHHHCCCCCCCcCC-
Q 006947 85 VNEQRTPLMVAATYGSIDIIRLILSE-----SGADVNLSCGNDKSTALHCAASGGALN-AVDVVKLLLAAGADPNFVDA- 157 (624)
Q Consensus 85 D~~G~TPLhlAA~~G~~eiVklLL~~-----~GADVN~~~d~~G~TPLH~Aa~~G~~~-~~eiVklLL~~GAD~n~~D~- 157 (624)
+.+|.|+||+||..|+.++|++|+.. .|++++.+ +..|.||||+|+..|+.. ..+++++|++.|++++.+|.
T Consensus 18 ~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~-d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin~~~~~ 96 (169)
T PHA02741 18 NSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNAT-DDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADINAQEML 96 (169)
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhcc-CCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCCCCCCcC
Confidence 67899999999999999999998643 26899998 899999999999998811 13789999999999999995
Q ss_pred CCCcHHHHHhcCCChhhHHHHHHHHHH-CCCCCcccccccccccCCCCChhhhhhhcCC
Q 006947 158 KGHHPVDVIVVPPKFQDVRLTLEELLA-TDGSVERNLRVSTTTSNSNSPPLSPALENGS 215 (624)
Q Consensus 158 ~G~TPLhlAa~~g~~~~~~~lLe~LL~-~gadv~~~~~l~~a~~~~g~TpL~lA~e~Gs 215 (624)
.|+||||+|+. .+..+++++|+. .|++++ ..+..|.|||++|+..|.
T Consensus 97 ~g~TpLh~A~~----~~~~~iv~~Ll~~~g~~~~-------~~n~~g~tpL~~A~~~~~ 144 (169)
T PHA02741 97 EGDTALHLAAH----RRDHDLAEWLCCQPGIDLH-------FCNADNKSPFELAIDNED 144 (169)
T ss_pred CCCCHHHHHHH----cCCHHHHHHHHhCCCCCCC-------cCCCCCCCHHHHHHHCCC
Confidence 99999999998 456678888887 588887 678899999999999884
No 52
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.68 E-value=1.9e-16 Score=150.53 Aligned_cols=134 Identities=22% Similarity=0.298 Sum_probs=117.4
Q ss_pred ccCCCCcccCccChHHHHHHHHcCCHHHHHHHHhcCCCCCcccccccccccCCccccCCCCchHHHHHhcCCHHHHHHHH
Q 006947 29 VDMNHLTVETDDAFASLLELAANNDVEGFKRSIVCDPSGVDEVGLWYGRQKGSKQMVNEQRTPLMVAATYGSIDIIRLIL 108 (624)
Q Consensus 29 ~d~~~ini~d~dg~TpLh~AA~~Gdle~Vk~LLe~~GadvN~~~l~~~~~~~~~~~D~~G~TPLhlAA~~G~~eiVklLL 108 (624)
.+.+++|.+|.+|+||||.|+.+|++++|+.||. .|++++.+ ..+|+||||-||...+.+|+.+||
T Consensus 85 e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~-~gAn~~a~-------------T~~GWTPLhSAckWnN~~va~~LL 150 (228)
T KOG0512|consen 85 EKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLL-SGANKEAK-------------TNEGWTPLHSACKWNNFEVAGRLL 150 (228)
T ss_pred hccccccccccccccHHHHHHhcCchHHHHHHHH-ccCCcccc-------------cccCccchhhhhcccchhHHHHHH
Confidence 5678899999999999999999999999999999 99999987 689999999999999999999999
Q ss_pred HhcCCCccccCCCCCChHHHHHHhCCCCChHHHHHHHHHC-CCCCCCcCCCCCcHHHHHhcCCChhhHHHHHH
Q 006947 109 SESGADVNLSCGNDKSTALHCAASGGALNAVDVVKLLLAA-GADPNFVDAKGHHPVDVIVVPPKFQDVRLTLE 180 (624)
Q Consensus 109 ~~~GADVN~~~d~~G~TPLH~Aa~~G~~~~~eiVklLL~~-GAD~n~~D~~G~TPLhlAa~~g~~~~~~~lLe 180 (624)
++ |+|||+. .....||||+||...+ ....+++||.. +.++...+..+.||+++|-+.+...-..++++
T Consensus 151 qh-gaDVnA~-t~g~ltpLhlaa~~rn--~r~t~~~Ll~dryi~pg~~nn~eeta~~iARRT~~s~~lfe~~e 219 (228)
T KOG0512|consen 151 QH-GADVNAQ-TKGLLTPLHLAAGNRN--SRDTLELLLHDRYIHPGLKNNLEETAFDIARRTSMSHYLFEIVE 219 (228)
T ss_pred hc-cCccccc-ccccchhhHHhhcccc--hHHHHHHHhhccccChhhhcCccchHHHHHHHhhhhHHHHHHHH
Confidence 99 9999999 8889999999998754 46667777755 88999999999999999988554444444554
No 53
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.68 E-value=7.3e-17 Score=174.91 Aligned_cols=157 Identities=25% Similarity=0.303 Sum_probs=135.5
Q ss_pred ccccCCCCcccCccChHHHHHHHHcCCHHHHHHHHhcCCCCCcccccccccccCCccccCCCCchHHHHHhcCCHHHHHH
Q 006947 27 TNVDMNHLTVETDDAFASLLELAANNDVEGFKRSIVCDPSGVDEVGLWYGRQKGSKQMVNEQRTPLMVAATYGSIDIIRL 106 (624)
Q Consensus 27 ~~~d~~~ini~d~dg~TpLh~AA~~Gdle~Vk~LLe~~GadvN~~~l~~~~~~~~~~~D~~G~TPLhlAA~~G~~eiVkl 106 (624)
.+..-.+++..+.+|.|+||.+|...+.++|++|++ .|++||.. |.+|+||||.|+..|++.+|++
T Consensus 59 ll~~ga~~~~~n~DglTalhq~~id~~~e~v~~l~e-~ga~Vn~~-------------d~e~wtPlhaaascg~~~i~~~ 124 (527)
T KOG0505|consen 59 LLNRGASPNLCNVDGLTALHQACIDDNLEMVKFLVE-NGANVNAQ-------------DNEGWTPLHAAASCGYLNIVEY 124 (527)
T ss_pred HhccCCCccccCCccchhHHHHHhcccHHHHHHHHH-hcCCcccc-------------ccccCCcchhhcccccHHHHHH
Confidence 334446678899999999999999999999999999 99999988 7999999999999999999999
Q ss_pred HHHhcCCCccccC----------------------------------------------------------CCCCChHHH
Q 006947 107 ILSESGADVNLSC----------------------------------------------------------GNDKSTALH 128 (624)
Q Consensus 107 LL~~~GADVN~~~----------------------------------------------------------d~~G~TPLH 128 (624)
||++ ||++-... +..|.|+||
T Consensus 125 li~~-gA~~~avNsdg~~P~dl~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~l~~G~~~d~~~~rG~T~lH 203 (527)
T KOG0505|consen 125 LIQH-GANLLAVNSDGNMPYDLAEDEATLDVLETEMARQGIDIEAARKAEEQTMLDDARQWLNAGAELDARHARGATALH 203 (527)
T ss_pred HHHh-hhhhhhccCCCCCccccccCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHHHHhccccccccccccchHHH
Confidence 9998 77643320 134889999
Q ss_pred HHHhCCCCChHHHHHHHHHCCCCCCCcCCCCCcHHHHHhcCCChhhHHHHHHHHHHCCCCCcccccccccccCCCCChhh
Q 006947 129 CAASGGALNAVDVVKLLLAAGADPNFVDAKGHHPVDVIVVPPKFQDVRLTLEELLATDGSVERNLRVSTTTSNSNSPPLS 208 (624)
Q Consensus 129 ~Aa~~G~~~~~eiVklLL~~GAD~n~~D~~G~TPLhlAa~~g~~~~~~~lLe~LL~~gadv~~~~~l~~a~~~~g~TpL~ 208 (624)
.|+..|. .++.++||++|.+++.+|.+|+||||.|+. =+...+.++|+++|++.+ +....|.+|+.
T Consensus 204 vAaa~Gy---~e~~~lLl~ag~~~~~~D~dgWtPlHAAA~----Wg~~~~~elL~~~ga~~d-------~~t~~g~~p~d 269 (527)
T KOG0505|consen 204 VAAANGY---TEVAALLLQAGYSVNIKDYDGWTPLHAAAH----WGQEDACELLVEHGADMD-------AKTKMGETPLD 269 (527)
T ss_pred HHHhhhH---HHHHHHHHHhccCcccccccCCCcccHHHH----hhhHhHHHHHHHhhcccc-------hhhhcCCCCcc
Confidence 9999999 999999999999999999999999999997 466778889999999998 66677788887
Q ss_pred hhhh
Q 006947 209 PALE 212 (624)
Q Consensus 209 lA~e 212 (624)
++.+
T Consensus 270 v~de 273 (527)
T KOG0505|consen 270 VADE 273 (527)
T ss_pred chhh
Confidence 7755
No 54
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.67 E-value=1.2e-16 Score=188.38 Aligned_cols=159 Identities=26% Similarity=0.313 Sum_probs=135.4
Q ss_pred ccCCCCcccCccChHHHHHHHHcCCHHHHHHHHhcCCCCCcccccccccccCCccccCCCCchHHHHHhcCCHHHHHHHH
Q 006947 29 VDMNHLTVETDDAFASLLELAANNDVEGFKRSIVCDPSGVDEVGLWYGRQKGSKQMVNEQRTPLMVAATYGSIDIIRLIL 108 (624)
Q Consensus 29 ~d~~~ini~d~dg~TpLh~AA~~Gdle~Vk~LLe~~GadvN~~~l~~~~~~~~~~~D~~G~TPLhlAA~~G~~eiVklLL 108 (624)
.....++...+.+.++||.|+..+.+.+++.+++ .|++++.. +..|.||||+||.+|++++|++||
T Consensus 495 e~~~~~~~~~~~~l~~lhla~~~~~v~~~~~l~~-~ga~v~~~-------------~~r~~TpLh~A~~~g~v~~VkfLL 560 (1143)
T KOG4177|consen 495 EGGANDNLDAKKGLTPLHLAADEDTVKVAKILLE-HGANVDLR-------------TGRGYTPLHVAVHYGNVDLVKFLL 560 (1143)
T ss_pred hcCCccCccchhccchhhhhhhhhhHHHHHHHhh-cCCceehh-------------cccccchHHHHHhcCCchHHHHhh
Confidence 3344577788899999999999999999999999 99999987 589999999999999999999999
Q ss_pred HhcCCCccccCCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCCCcCCCCCcHHHHHhcCCChhhHHHHHHHHHHCCCC
Q 006947 109 SESGADVNLSCGNDKSTALHCAASGGALNAVDVVKLLLAAGADPNFVDAKGHHPVDVIVVPPKFQDVRLTLEELLATDGS 188 (624)
Q Consensus 109 ~~~GADVN~~~d~~G~TPLH~Aa~~G~~~~~eiVklLL~~GAD~n~~D~~G~TPLhlAa~~g~~~~~~~lLe~LL~~gad 188 (624)
++ |||++.+ ++.|+||||.||..|+ .+|+++|+++||++|..|.+|.|||++|++ .+...+++.|+..++.
T Consensus 561 e~-gAdv~ak-~~~G~TPLH~Aa~~G~---~~i~~LLlk~GA~vna~d~~g~TpL~iA~~----lg~~~~~k~l~~~~~~ 631 (1143)
T KOG4177|consen 561 EH-GADVNAK-DKLGYTPLHQAAQQGH---NDIAELLLKHGASVNAADLDGFTPLHIAVR----LGYLSVVKLLKVVTAT 631 (1143)
T ss_pred hC-Ccccccc-CCCCCChhhHHHHcCh---HHHHHHHHHcCCCCCcccccCcchhHHHHH----hcccchhhHHHhccCc
Confidence 99 9999999 8999999999999999 999999999999999999999999999999 5555677777777776
Q ss_pred CcccccccccccCCCCChhhhhhh
Q 006947 189 VERNLRVSTTTSNSNSPPLSPALE 212 (624)
Q Consensus 189 v~~~~~l~~a~~~~g~TpL~lA~e 212 (624)
.. ..-.......|.+|..+..+
T Consensus 632 ~~--~~~~~~e~~~g~~p~~v~e~ 653 (1143)
T KOG4177|consen 632 PA--ATDPVKENRKGAVPEDVAEE 653 (1143)
T ss_pred cc--cccchhhhhcccChhhHHHH
Confidence 31 11112344556666665543
No 55
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.67 E-value=4.2e-16 Score=133.37 Aligned_cols=89 Identities=37% Similarity=0.536 Sum_probs=79.7
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCcccccccccccCCccccCCCCchHHHHHhcCCHHHHHHHHHhcCCCccccCCCCCC
Q 006947 45 LLELAANNDVEGFKRSIVCDPSGVDEVGLWYGRQKGSKQMVNEQRTPLMVAATYGSIDIIRLILSESGADVNLSCGNDKS 124 (624)
Q Consensus 45 Lh~AA~~Gdle~Vk~LLe~~GadvN~~~l~~~~~~~~~~~D~~G~TPLhlAA~~G~~eiVklLL~~~GADVN~~~d~~G~ 124 (624)
||.||..|++++++.|++ .+.+++. |+||||+||..|+.+++++|++. |++++.+ +..|+
T Consensus 1 L~~A~~~~~~~~~~~ll~-~~~~~~~-----------------~~~~l~~A~~~~~~~~~~~Ll~~-g~~~~~~-~~~g~ 60 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLE-KGADINL-----------------GNTALHYAAENGNLEIVKLLLEN-GADINSQ-DKNGN 60 (89)
T ss_dssp HHHHHHTTTHHHHHHHHH-TTSTTTS-----------------SSBHHHHHHHTTTHHHHHHHHHT-TTCTT-B-STTSS
T ss_pred CHHHHHcCCHHHHHHHHH-CcCCCCC-----------------CCCHHHHHHHcCCHHHHHHHHHh-ccccccc-CCCCC
Confidence 799999999999999999 7766552 77999999999999999999998 8999999 89999
Q ss_pred hHHHHHHhCCCCChHHHHHHHHHCCCCCCCcC
Q 006947 125 TALHCAASGGALNAVDVVKLLLAAGADPNFVD 156 (624)
Q Consensus 125 TPLH~Aa~~G~~~~~eiVklLL~~GAD~n~~D 156 (624)
||||+|+..|+ .+++++|+++|++++.+|
T Consensus 61 t~L~~A~~~~~---~~~~~~Ll~~g~~~~~~n 89 (89)
T PF12796_consen 61 TALHYAAENGN---LEIVKLLLEHGADVNIRN 89 (89)
T ss_dssp BHHHHHHHTTH---HHHHHHHHHTTT-TTSS-
T ss_pred CHHHHHHHcCC---HHHHHHHHHcCCCCCCcC
Confidence 99999999999 999999999999999875
No 56
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.66 E-value=3.6e-16 Score=150.49 Aligned_cols=125 Identities=16% Similarity=0.176 Sum_probs=106.1
Q ss_pred ccCCccccCCCCchHHHHHhcCCH----HHHHHHHHhcCCCccccCCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCC
Q 006947 78 QKGSKQMVNEQRTPLMVAATYGSI----DIIRLILSESGADVNLSCGNDKSTALHCAASGGALNAVDVVKLLLAAGADPN 153 (624)
Q Consensus 78 ~~~~~~~D~~G~TPLhlAA~~G~~----eiVklLL~~~GADVN~~~d~~G~TPLH~Aa~~G~~~~~eiVklLL~~GAD~n 153 (624)
+.++...+.++.++||.||..|++ +++++|++. |++++.+ +.+|+||||+|+..|+.+.+++|++|++.|+++|
T Consensus 10 ~~~~~~~~~~~~~~l~~a~~~g~~~~l~~~~~~l~~~-g~~~~~~-d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin 87 (166)
T PHA02743 10 NLGAVEIDEDEQNTFLRICRTGNIYELMEVAPFISGD-GHLLHRY-DHHGRQCTHMVAWYDRANAVMKIELLVNMGADIN 87 (166)
T ss_pred chHHhhhccCCCcHHHHHHHcCCHHHHHHHHHHHhhc-chhhhcc-CCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCCC
Confidence 344445578899999999999998 566677777 8999988 8999999999999998444566899999999999
Q ss_pred CcC-CCCCcHHHHHhcCCChhhHHHHHHHHHH-CCCCCcccccccccccCCCCChhhhhhhcCC
Q 006947 154 FVD-AKGHHPVDVIVVPPKFQDVRLTLEELLA-TDGSVERNLRVSTTTSNSNSPPLSPALENGS 215 (624)
Q Consensus 154 ~~D-~~G~TPLhlAa~~g~~~~~~~lLe~LL~-~gadv~~~~~l~~a~~~~g~TpL~lA~e~Gs 215 (624)
.+| ..|.||||+|+. .+..+++++|+. .|++++ ..+..|.|||++|+..|.
T Consensus 88 ~~d~~~g~TpLh~A~~----~g~~~iv~~Ll~~~gad~~-------~~d~~g~tpL~~A~~~~~ 140 (166)
T PHA02743 88 ARELGTGNTLLHIAAS----TKNYELAEWLCRQLGVNLG-------AINYQHETAYHIAYKMRD 140 (166)
T ss_pred CCCCCCCCcHHHHHHH----hCCHHHHHHHHhccCCCcc-------CcCCCCCCHHHHHHHcCC
Confidence 998 589999999998 455678888884 788887 778899999999998884
No 57
>PHA02730 ankyrin-like protein; Provisional
Probab=99.65 E-value=5e-16 Score=176.92 Aligned_cols=140 Identities=18% Similarity=0.092 Sum_probs=114.2
Q ss_pred cccCCCCc-ccCccChHHHHHHHHcC---CHHHHHHHHhcCCCCCcccccccccccCCccccCCCCchHHHHHhcC--CH
Q 006947 28 NVDMNHLT-VETDDAFASLLELAANN---DVEGFKRSIVCDPSGVDEVGLWYGRQKGSKQMVNEQRTPLMVAATYG--SI 101 (624)
Q Consensus 28 ~~d~~~in-i~d~dg~TpLh~AA~~G---dle~Vk~LLe~~GadvN~~~l~~~~~~~~~~~D~~G~TPLhlAA~~G--~~ 101 (624)
.+...+++ .+|.+|.|+||+|+..| +.++|+.||+ .|++++.. |.+|.||||+|+..+ +.
T Consensus 27 ~~~~~~in~~kd~~G~TaLh~A~~~~~~~~~eivklLLs-~GAdin~k-------------D~~G~TPLh~Aa~~~~~~~ 92 (672)
T PHA02730 27 IETCHNLSKHIDRRGNNALHCYVSNKCDTDIKIVRLLLS-RGVERLCR-------------NNEGLTPLGVYSKRKYVKS 92 (672)
T ss_pred HHHhcchhhhcCCCCCcHHHHHHHcCCcCcHHHHHHHHh-CCCCCccc-------------CCCCCChHHHHHHcCCCcH
Confidence 34444777 78889999999999997 5999999998 99999987 689999999999966 79
Q ss_pred HHHHHHHHhcCCCc--cccCCCCCChHHHHHHh--CCCCChHHHHHHHHH-CCCCCCCcCC-----CCCcHHHHHhcCCC
Q 006947 102 DIIRLILSESGADV--NLSCGNDKSTALHCAAS--GGALNAVDVVKLLLA-AGADPNFVDA-----KGHHPVDVIVVPPK 171 (624)
Q Consensus 102 eiVklLL~~~GADV--N~~~d~~G~TPLH~Aa~--~G~~~~~eiVklLL~-~GAD~n~~D~-----~G~TPLhlAa~~g~ 171 (624)
++|++||+. |+++ +.. +.-+.+|||.++. .++ .++|++|+. .++|++.... .|.+|+++++.
T Consensus 93 eIv~~Ll~~-~~~~~~~~~-~~~~d~~l~~y~~s~n~~---~~~vk~Li~~~~~~~~~~~~~~~~~~~~~~~yl~~~--- 164 (672)
T PHA02730 93 QIVHLLISS-YSNASNELT-SNINDFDLYSYMSSDNID---LRLLKYLIVDKRIRPSKNTNYYIHCLGLVDIYVTTP--- 164 (672)
T ss_pred HHHHHHHhc-CCCCCcccc-cccCCchHHHHHHhcCCc---HHHHHHHHHhcCCChhhhhhhhccccchhhhhHhcC---
Confidence 999999988 5544 655 6668888888877 777 888888886 5678776633 68888888887
Q ss_pred hhhHHHHHHHHHHCCCCCc
Q 006947 172 FQDVRLTLEELLATDGSVE 190 (624)
Q Consensus 172 ~~~~~~lLe~LL~~gadv~ 190 (624)
.+..++|++|++.|+++.
T Consensus 165 -~~~~eIvklLi~~g~~v~ 182 (672)
T PHA02730 165 -NPRPEVLLWLLKSECYST 182 (672)
T ss_pred -CCchHHHHHHHHcCCccc
Confidence 667778888888888874
No 58
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.65 E-value=6.1e-16 Score=160.95 Aligned_cols=127 Identities=27% Similarity=0.414 Sum_probs=114.4
Q ss_pred ccCCCCcccCccChHHHHHHHHc-----CCHHHHHHHHhcCCCCCcccccccccccCCccccCCCCchHHHHHhcCCHHH
Q 006947 29 VDMNHLTVETDDAFASLLELAAN-----NDVEGFKRSIVCDPSGVDEVGLWYGRQKGSKQMVNEQRTPLMVAATYGSIDI 103 (624)
Q Consensus 29 ~d~~~ini~d~dg~TpLh~AA~~-----Gdle~Vk~LLe~~GadvN~~~l~~~~~~~~~~~D~~G~TPLhlAA~~G~~ei 103 (624)
-+.++++..++.|+||++.++.. .|.++|..|+. -.|||.+. ...|+|+||+|+.+|++++
T Consensus 290 SgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~--mgnVNaKA------------sQ~gQTALMLAVSHGr~d~ 355 (452)
T KOG0514|consen 290 SGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFK--MGDVNAKA------------SQHGQTALMLAVSHGRVDM 355 (452)
T ss_pred cCcccccccccccccHHHHHHHHhhcchhhHHHHHHHHh--ccCcchhh------------hhhcchhhhhhhhcCcHHH
Confidence 46789999999999999999874 58889999987 44777765 5789999999999999999
Q ss_pred HHHHHHhcCCCccccCCCCCChHHHHHHhCCCCChHHHHHHHHHC-CCCCCCcCCCCCcHHHHHhcCCChhh
Q 006947 104 IRLILSESGADVNLSCGNDKSTALHCAASGGALNAVDVVKLLLAA-GADPNFVDAKGHHPVDVIVVPPKFQD 174 (624)
Q Consensus 104 VklLL~~~GADVN~~~d~~G~TPLH~Aa~~G~~~~~eiVklLL~~-GAD~n~~D~~G~TPLhlAa~~g~~~~ 174 (624)
|+.||.- |||||.+ |.+|.|+|+|||..|| .|||++||.. ++|+...|.+|-|+|.+|...|+.+.
T Consensus 356 vk~LLac-gAdVNiQ-DdDGSTALMCA~EHGh---kEivklLLA~p~cd~sLtD~DgSTAl~IAleagh~eI 422 (452)
T KOG0514|consen 356 VKALLAC-GADVNIQ-DDDGSTALMCAAEHGH---KEIVKLLLAVPSCDISLTDVDGSTALSIALEAGHREI 422 (452)
T ss_pred HHHHHHc-cCCCccc-cCCccHHHhhhhhhCh---HHHHHHHhccCcccceeecCCCchhhhhHHhcCchHH
Confidence 9999977 9999999 9999999999999999 9999999988 89999999999999999999665443
No 59
>PHA02730 ankyrin-like protein; Provisional
Probab=99.64 E-value=1.5e-15 Score=173.14 Aligned_cols=142 Identities=15% Similarity=0.170 Sum_probs=119.2
Q ss_pred HHHHHHHcC---CHHHHHHHHhcCCCCCcccccccccccCCccccCCCCchHHHHHhcCC----HHHHHHHHHhcCC--C
Q 006947 44 SLLELAANN---DVEGFKRSIVCDPSGVDEVGLWYGRQKGSKQMVNEQRTPLMVAATYGS----IDIIRLILSESGA--D 114 (624)
Q Consensus 44 pLh~AA~~G---dle~Vk~LLe~~GadvN~~~l~~~~~~~~~~~D~~G~TPLhlAA~~G~----~eiVklLL~~~GA--D 114 (624)
.|+.-...+ +.++++.||+ +|+++|.. ..|.||||+|+..++ .++|++||++ |+ +
T Consensus 346 ~l~~Y~~~~~~v~ieIvelLIs-~GAdIN~k--------------~~G~TpLH~Aa~~nnn~i~~eIvelLIs~-Ga~~d 409 (672)
T PHA02730 346 MLINYLHYGDMVSIPILRCMLD-NGATMDKT--------------TDNNYPLHDYFVNNNNIVDVNVVRFIVEN-NGHMA 409 (672)
T ss_pred HHHHHHhcCCcCcHHHHHHHHH-CCCCCCcC--------------CCCCcHHHHHHHHcCCcchHHHHHHHHHc-CCCcc
Confidence 678888866 5999999999 99999963 579999999999885 8999999999 76 7
Q ss_pred ccccCCCCCChHHHH---HHhCCC------CChHHHHHHHHHCCCCCCCcCCCCCcHHHHHhcCCChhhHHHHHHHHHHC
Q 006947 115 VNLSCGNDKSTALHC---AASGGA------LNAVDVVKLLLAAGADPNFVDAKGHHPVDVIVVPPKFQDVRLTLEELLAT 185 (624)
Q Consensus 115 VN~~~d~~G~TPLH~---Aa~~G~------~~~~eiVklLL~~GAD~n~~D~~G~TPLhlAa~~g~~~~~~~lLe~LL~~ 185 (624)
+|.+ +.+|.||||. |...+. ....+++++|+.+|||+|.+|..|.||||+|+. .+..+++++|+++
T Consensus 410 IN~k-d~~G~T~Lh~~i~a~~~n~~~~~~e~~~~~ivk~LIs~GADINakD~~G~TPLh~Aa~----~~~~eive~LI~~ 484 (672)
T PHA02730 410 INHV-SNNGRLCMYGLILSRFNNCGYHCYETILIDVFDILSKYMDDIDMIDNENKTLLYYAVD----VNNIQFARRLLEY 484 (672)
T ss_pred cccc-ccCCCchHhHHHHHHhccccccccchhHHHHHHHHHhcccchhccCCCCCCHHHHHHH----hCCHHHHHHHHHC
Confidence 9998 8899999994 332221 002467999999999999999999999999998 5567899999999
Q ss_pred CCCCcccccccccccC-CCCChhhhhhhc
Q 006947 186 DGSVERNLRVSTTTSN-SNSPPLSPALEN 213 (624)
Q Consensus 186 gadv~~~~~l~~a~~~-~g~TpL~lA~e~ 213 (624)
|++++ +.+. .|.|||+.|+..
T Consensus 485 GAdIN-------~~d~~~g~TaL~~Aa~~ 506 (672)
T PHA02730 485 GASVN-------TTSRSIINTAIQKSSYR 506 (672)
T ss_pred CCCCC-------CCCCcCCcCHHHHHHHh
Confidence 99998 6665 589999999764
No 60
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.64 E-value=1.5e-16 Score=161.10 Aligned_cols=116 Identities=29% Similarity=0.395 Sum_probs=104.7
Q ss_pred cCCccccCCCCchHHHHHhcCCHHHHHHHHHhcCCCccccCCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCCCcCCC
Q 006947 79 KGSKQMVNEQRTPLMVAATYGSIDIIRLILSESGADVNLSCGNDKSTALHCAASGGALNAVDVVKLLLAAGADPNFVDAK 158 (624)
Q Consensus 79 ~~~~~~D~~G~TPLhlAA~~G~~eiVklLL~~~GADVN~~~d~~G~TPLH~Aa~~G~~~~~eiVklLL~~GAD~n~~D~~ 158 (624)
.+.+.-|..|.+||||||..|+..+|+.||.+ |+.||.. +....||||+|+..|| .++|+.||++.+|+|+++..
T Consensus 25 hdln~gddhgfsplhwaakegh~aivemll~r-garvn~t-nmgddtplhlaaahgh---rdivqkll~~kadvnavneh 99 (448)
T KOG0195|consen 25 HDLNVGDDHGFSPLHWAAKEGHVAIVEMLLSR-GARVNST-NMGDDTPLHLAAAHGH---RDIVQKLLSRKADVNAVNEH 99 (448)
T ss_pred cccccccccCcchhhhhhhcccHHHHHHHHhc-ccccccc-cCCCCcchhhhhhccc---HHHHHHHHHHhcccchhhcc
Confidence 34444489999999999999999999999999 9999998 7777899999999999 99999999999999999999
Q ss_pred CCcHHHHHhcCCChhhHHHHHHHHHHCCCCCcccccccccccCCCCChhhhh
Q 006947 159 GHHPVDVIVVPPKFQDVRLTLEELLATDGSVERNLRVSTTTSNSNSPPLSPA 210 (624)
Q Consensus 159 G~TPLhlAa~~g~~~~~~~lLe~LL~~gadv~~~~~l~~a~~~~g~TpL~lA 210 (624)
|+||||+||. =+...+.|-|+..|+.++ .++..|.|||..|
T Consensus 100 gntplhyacf----wgydqiaedli~~ga~v~-------icnk~g~tpldka 140 (448)
T KOG0195|consen 100 GNTPLHYACF----WGYDQIAEDLISCGAAVN-------ICNKKGMTPLDKA 140 (448)
T ss_pred CCCchhhhhh----hcHHHHHHHHHhccceee-------ecccCCCCchhhh
Confidence 9999999998 567788999999999998 7788888887654
No 61
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.64 E-value=1.2e-15 Score=160.33 Aligned_cols=119 Identities=27% Similarity=0.261 Sum_probs=104.1
Q ss_pred ccccCCCCc-hHHHHHhcCCHHHHHHHHHhcCCCccccC---CCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCCCcC-
Q 006947 82 KQMVNEQRT-PLMVAATYGSIDIIRLILSESGADVNLSC---GNDKSTALHCAASGGALNAVDVVKLLLAAGADPNFVD- 156 (624)
Q Consensus 82 ~~~D~~G~T-PLhlAA~~G~~eiVklLL~~~GADVN~~~---d~~G~TPLH~Aa~~G~~~~~eiVklLL~~GAD~n~~D- 156 (624)
+..|.+|.| +||.|+..|+.++|++||++ |||+|.+. +..|.||||+|+..|+ .+++++|+++|||+|.++
T Consensus 26 ~~~d~~~~~~lL~~A~~~~~~eivk~LL~~-GAdiN~~~~~sd~~g~TpLh~Aa~~~~---~eivklLL~~GADVN~~~~ 101 (300)
T PHA02884 26 KKKNKICIANILYSSIKFHYTDIIDAILKL-GADPEAPFPLSENSKTNPLIYAIDCDN---DDAAKLLIRYGADVNRYAE 101 (300)
T ss_pred hccCcCCCCHHHHHHHHcCCHHHHHHHHHC-CCCccccCcccCCCCCCHHHHHHHcCC---HHHHHHHHHcCCCcCcccC
Confidence 445777877 56677778999999999999 99999862 3589999999999999 999999999999999964
Q ss_pred CCCCcHHHHHhcCCChhhHHHHHHHHHHCCCCCcccccccccccCCCCChhhhhhhcCC
Q 006947 157 AKGHHPVDVIVVPPKFQDVRLTLEELLATDGSVERNLRVSTTTSNSNSPPLSPALENGS 215 (624)
Q Consensus 157 ~~G~TPLhlAa~~g~~~~~~~lLe~LL~~gadv~~~~~l~~a~~~~g~TpL~lA~e~Gs 215 (624)
..|.||||+|+. .+..+++++|+..|++++ ..+..|.|||++|++.+.
T Consensus 102 ~~g~TpLh~Aa~----~~~~eivklLL~~GAdin-------~kd~~G~TpL~~A~~~~~ 149 (300)
T PHA02884 102 EAKITPLYISVL----HGCLKCLEILLSYGADIN-------IQTNDMVTPIELALMICN 149 (300)
T ss_pred CCCCCHHHHHHH----cCCHHHHHHHHHCCCCCC-------CCCCCCCCHHHHHHHhCC
Confidence 689999999998 556789999999999998 778899999999998763
No 62
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.62 E-value=7.8e-15 Score=129.21 Aligned_cols=124 Identities=36% Similarity=0.493 Sum_probs=111.4
Q ss_pred ccCccChHHHHHHHHcCCHHHHHHHHhcCCCCCcccccccccccCCccccCCCCchHHHHHhcCCHHHHHHHHHhcCCCc
Q 006947 36 VETDDAFASLLELAANNDVEGFKRSIVCDPSGVDEVGLWYGRQKGSKQMVNEQRTPLMVAATYGSIDIIRLILSESGADV 115 (624)
Q Consensus 36 i~d~dg~TpLh~AA~~Gdle~Vk~LLe~~GadvN~~~l~~~~~~~~~~~D~~G~TPLhlAA~~G~~eiVklLL~~~GADV 115 (624)
..+.+|.|+||.|+..|+.+.++.|++ .+.+++.. +..|.||||.|+..++.+++++|++. |+++
T Consensus 2 ~~~~~g~t~l~~a~~~~~~~~i~~li~-~~~~~~~~-------------~~~g~~~l~~a~~~~~~~~~~~ll~~-~~~~ 66 (126)
T cd00204 2 ARDEDGRTPLHLAASNGHLEVVKLLLE-NGADVNAK-------------DNDGRTPLHLAAKNGHLEIVKLLLEK-GADV 66 (126)
T ss_pred CcCcCCCCHHHHHHHcCcHHHHHHHHH-cCCCCCcc-------------CCCCCcHHHHHHHcCCHHHHHHHHHc-CCCc
Confidence 456789999999999999999999999 77776554 68999999999999999999999998 8899
Q ss_pred cccCCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCCCcCCCCCcHHHHHhcCCChhhHHHHHHHH
Q 006947 116 NLSCGNDKSTALHCAASGGALNAVDVVKLLLAAGADPNFVDAKGHHPVDVIVVPPKFQDVRLTLEEL 182 (624)
Q Consensus 116 N~~~d~~G~TPLH~Aa~~G~~~~~eiVklLL~~GAD~n~~D~~G~TPLhlAa~~g~~~~~~~lLe~L 182 (624)
+.. +..|.||+|+|+..++ .+++++|+..|.+++..|..|.||+++|... ....++++|
T Consensus 67 ~~~-~~~~~~~l~~a~~~~~---~~~~~~L~~~~~~~~~~~~~~~~~l~~~~~~----~~~~~~~~L 125 (126)
T cd00204 67 NAR-DKDGNTPLHLAARNGN---LDVVKLLLKHGADVNARDKDGRTPLHLAAKN----GHLEVVKLL 125 (126)
T ss_pred ccc-CCCCCCHHHHHHHcCc---HHHHHHHHHcCCCCcccCCCCCCHHHHHHhc----CCHHHHHHh
Confidence 988 8899999999999999 9999999999999999999999999999984 445555554
No 63
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.60 E-value=2e-15 Score=168.62 Aligned_cols=165 Identities=22% Similarity=0.202 Sum_probs=135.3
Q ss_pred CCCCcccCccChHHHHHHHHcCCHHHHHHHHhcCCCCCcccccccccccCCccccCCCCchHHHHHhcCCHHHHHHHHHh
Q 006947 31 MNHLTVETDDAFASLLELAANNDVEGFKRSIVCDPSGVDEVGLWYGRQKGSKQMVNEQRTPLMVAATYGSIDIIRLILSE 110 (624)
Q Consensus 31 ~~~ini~d~dg~TpLh~AA~~Gdle~Vk~LLe~~GadvN~~~l~~~~~~~~~~~D~~G~TPLhlAA~~G~~eiVklLL~~ 110 (624)
-..++..|.+|+|.||.||.+|+.++++.|++ ..+-++.. |.+|.+|||+||+.|+.++|++||.+
T Consensus 39 sds~n~qd~~gfTalhha~Lng~~~is~llle-~ea~ldl~-------------d~kg~~plhlaaw~g~~e~vkmll~q 104 (854)
T KOG0507|consen 39 SDSHNLQDYSGFTLLHHAVLNGQNQISKLLLD-YEALLDLC-------------DTKGILPLHLAAWNGNLEIVKMLLLQ 104 (854)
T ss_pred CccccccCccchhHHHHHHhcCchHHHHHHhc-chhhhhhh-------------hccCcceEEehhhcCcchHHHHHHhc
Confidence 34566777899999999999999999999999 66666665 68999999999999999999999988
Q ss_pred cCCCccccCCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCCCcCCCCCcHHHHHhcCCChhhHHHHHHHHHHCCCCCc
Q 006947 111 SGADVNLSCGNDKSTALHCAASGGALNAVDVVKLLLAAGADPNFVDAKGHHPVDVIVVPPKFQDVRLTLEELLATDGSVE 190 (624)
Q Consensus 111 ~GADVN~~~d~~G~TPLH~Aa~~G~~~~~eiVklLL~~GAD~n~~D~~G~TPLhlAa~~g~~~~~~~lLe~LL~~gadv~ 190 (624)
+..+|.. ...|.||||.||..|| .++|.+||.+|+|+-++|..+.|+|++|++-| ...+++.|+...-.+.
T Consensus 105 -~d~~na~-~~e~~tplhlaaqhgh---~dvv~~Ll~~~adp~i~nns~~t~ldlA~qfg----r~~Vvq~ll~~~~~~~ 175 (854)
T KOG0507|consen 105 -TDILNAV-NIENETPLHLAAQHGH---LEVVFYLLKKNADPFIRNNSKETVLDLASRFG----RAEVVQMLLQKKFPVQ 175 (854)
T ss_pred -ccCCCcc-cccCcCccchhhhhcc---hHHHHHHHhcCCCccccCcccccHHHHHHHhh----hhHHHHHHhhhccchh
Confidence 7889988 8899999999999999 99999999999999999999999999999944 4455555555522221
Q ss_pred ccc-cccccccCCCCChhhhhhhcCCCCC
Q 006947 191 RNL-RVSTTTSNSNSPPLSPALENGSPTS 218 (624)
Q Consensus 191 ~~~-~l~~a~~~~g~TpL~lA~e~Gs~~~ 218 (624)
... .-.....-.+.++||+|+++|+..+
T Consensus 176 ~~~~~~~~~~~~~~~~plHlaakngh~~~ 204 (854)
T KOG0507|consen 176 SSLRVGDIKRPFPAIYPLHLAAKNGHVEC 204 (854)
T ss_pred hcccCCCCCCCCCCcCCcchhhhcchHHH
Confidence 111 1133455578899999999986543
No 64
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.58 E-value=5.5e-15 Score=127.57 Aligned_cols=106 Identities=30% Similarity=0.410 Sum_probs=97.4
Q ss_pred HHHHHHHHcCCHHHHHHHHhcCCCCCcccccccccccCCccccCCCCchHHHHHhcCCHHHHHHHHHhcCCCccccCCCC
Q 006947 43 ASLLELAANNDVEGFKRSIVCDPSGVDEVGLWYGRQKGSKQMVNEQRTPLMVAATYGSIDIIRLILSESGADVNLSCGND 122 (624)
Q Consensus 43 TpLh~AA~~Gdle~Vk~LLe~~GadvN~~~l~~~~~~~~~~~D~~G~TPLhlAA~~G~~eiVklLL~~~GADVN~~~d~~ 122 (624)
..+.+++++|+++.||..+. .|.+||.. ..|+||||+||-+|.++++++|+.. ||+|+.+ |+.
T Consensus 4 ~~~~W~vkNG~~DeVk~~v~-~g~nVn~~--------------~ggR~plhyAAD~GQl~ilefli~i-GA~i~~k-DKy 66 (117)
T KOG4214|consen 4 MSVAWNVKNGEIDEVKQSVN-EGLNVNEI--------------YGGRTPLHYAADYGQLSILEFLISI-GANIQDK-DKY 66 (117)
T ss_pred hhHhhhhccCcHHHHHHHHH-ccccHHHH--------------hCCcccchHhhhcchHHHHHHHHHh-ccccCCc-ccc
Confidence 45789999999999999999 88888876 5899999999999999999999998 9999999 999
Q ss_pred CChHHHHHHhCCCCChHHHHHHHHHCCCCCCCcCCCCCcHHHHHhc
Q 006947 123 KSTALHCAASGGALNAVDVVKLLLAAGADPNFVDAKGHHPVDVIVV 168 (624)
Q Consensus 123 G~TPLH~Aa~~G~~~~~eiVklLL~~GAD~n~~D~~G~TPLhlAa~ 168 (624)
|-|||.-|+..|| .++|++||+.|||-.....+|.+.+..+-.
T Consensus 67 gITPLLsAvwEGH---~~cVklLL~~GAdrt~~~PdG~~~~eate~ 109 (117)
T KOG4214|consen 67 GITPLLSAVWEGH---RDCVKLLLQNGADRTIHAPDGTALIEATEE 109 (117)
T ss_pred CCcHHHHHHHHhh---HHHHHHHHHcCcccceeCCCchhHHhhccH
Confidence 9999999999999 999999999999999999999887765543
No 65
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.58 E-value=7e-15 Score=172.19 Aligned_cols=147 Identities=20% Similarity=0.203 Sum_probs=117.9
Q ss_pred ccChHHHHHHHHcCCHHHHHHHHhcC--CCCCcccccccccccCCccccCCCCchHH-HHHhcCCHHHHHHHHHhcCCC-
Q 006947 39 DDAFASLLELAANNDVEGFKRSIVCD--PSGVDEVGLWYGRQKGSKQMVNEQRTPLM-VAATYGSIDIIRLILSESGAD- 114 (624)
Q Consensus 39 ~dg~TpLh~AA~~Gdle~Vk~LLe~~--GadvN~~~l~~~~~~~~~~~D~~G~TPLh-lAA~~G~~eiVklLL~~~GAD- 114 (624)
.++...|+.||..||.+.|+.+++ . +.++|.. |..|+|||| .|+..++.+++++|++. |+.
T Consensus 15 ~~~~~~~l~A~~~g~~~~v~~lL~-~~~~~~in~~-------------d~~G~t~Lh~~A~~~~~~eiv~lLl~~-g~~~ 79 (743)
T TIGR00870 15 SDEEKAFLPAAERGDLASVYRDLE-EPKKLNINCP-------------DRLGRSALFVAAIENENLELTELLLNL-SCRG 79 (743)
T ss_pred CHHHHHHHHHHHcCCHHHHHHHhc-cccccCCCCc-------------CccchhHHHHHHHhcChHHHHHHHHhC-CCCC
Confidence 367899999999999999999998 6 6777765 567777777 67777777777777766 420
Q ss_pred -------------------------------------cccc---CCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCCC
Q 006947 115 -------------------------------------VNLS---CGNDKSTALHCAASGGALNAVDVVKLLLAAGADPNF 154 (624)
Q Consensus 115 -------------------------------------VN~~---~d~~G~TPLH~Aa~~G~~~~~eiVklLL~~GAD~n~ 154 (624)
++.. ....|.||||+||..|+ .++|++||++|||++.
T Consensus 80 ~~G~T~Lh~A~~~~~~~v~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~G~TpLhlAa~~~~---~eiVklLL~~GAdv~~ 156 (743)
T TIGR00870 80 AVGDTLLHAISLEYVDAVEAILLHLLAAFRKSGPLELANDQYTSEFTPGITALHLAAHRQN---YEIVKLLLERGASVPA 156 (743)
T ss_pred CcChHHHHHHHhccHHHHHHHHHHHhhcccccCchhhhccccccccCCCCcHHHHHHHhCC---HHHHHHHHhCCCCCCc
Confidence 0000 02358999999999999 9999999999999987
Q ss_pred cC--------------CCCCcHHHHHhcCCChhhHHHHHHHHHHCCCCCcccccccccccCCCCChhhhhhhcC
Q 006947 155 VD--------------AKGHHPVDVIVVPPKFQDVRLTLEELLATDGSVERNLRVSTTTSNSNSPPLSPALENG 214 (624)
Q Consensus 155 ~D--------------~~G~TPLhlAa~~g~~~~~~~lLe~LL~~gadv~~~~~l~~a~~~~g~TpL~lA~e~G 214 (624)
++ ..|.||||+|+. .+..+++++|++.|++++ .++..|.|+||+|+.++
T Consensus 157 ~~~~~~~~~~~~~~~~~~g~tpL~~Aa~----~~~~~iv~lLl~~gadin-------~~d~~g~T~Lh~A~~~~ 219 (743)
T TIGR00870 157 RACGDFFVKSQGVDSFYHGESPLNAAAC----LGSPSIVALLSEDPADIL-------TADSLGNTLLHLLVMEN 219 (743)
T ss_pred CcCCchhhcCCCCCcccccccHHHHHHH----hCCHHHHHHHhcCCcchh-------hHhhhhhHHHHHHHhhh
Confidence 53 358999999998 556788999999999888 77889999999998876
No 66
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.57 E-value=3.4e-15 Score=141.14 Aligned_cols=102 Identities=12% Similarity=0.112 Sum_probs=91.6
Q ss_pred cccCccChHHHHHHHHcCCHH---HHHHHHhcCCCCCcccccccccccCCccccCCCCchHHHHHhcCCHHHHHHHHHhc
Q 006947 35 TVETDDAFASLLELAANNDVE---GFKRSIVCDPSGVDEVGLWYGRQKGSKQMVNEQRTPLMVAATYGSIDIIRLILSES 111 (624)
Q Consensus 35 ni~d~dg~TpLh~AA~~Gdle---~Vk~LLe~~GadvN~~~l~~~~~~~~~~~D~~G~TPLhlAA~~G~~eiVklLL~~~ 111 (624)
+..|.+|.|+||+|+..|+.+ .++.|++ .|+++|..+ +.+|.||||+|+..|+.+++++||.+.
T Consensus 49 ~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~-~gadin~~~------------~~~g~T~Lh~A~~~~~~~i~~~Ll~~~ 115 (154)
T PHA02736 49 LEYNRHGKQCVHIVSNPDKADPQEKLKLLME-WGADINGKE------------RVFGNTPLHIAVYTQNYELATWLCNQP 115 (154)
T ss_pred HHhcCCCCEEEEeecccCchhHHHHHHHHHH-cCCCccccC------------CCCCCcHHHHHHHhCCHHHHHHHHhCC
Confidence 345889999999999999875 5778888 899999873 358999999999999999999999755
Q ss_pred CCCccccCCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCC
Q 006947 112 GADVNLSCGNDKSTALHCAASGGALNAVDVVKLLLAAGADPN 153 (624)
Q Consensus 112 GADVN~~~d~~G~TPLH~Aa~~G~~~~~eiVklLL~~GAD~n 153 (624)
|++++.+ +..|.||||+|+..|+ .+++++|+++|++++
T Consensus 116 g~d~n~~-~~~g~tpL~~A~~~~~---~~i~~~Ll~~ga~~~ 153 (154)
T PHA02736 116 GVNMEIL-NYAFKTPYYVACERHD---AKMMNILRAKGAQCK 153 (154)
T ss_pred CCCCccc-cCCCCCHHHHHHHcCC---HHHHHHHHHcCCCCC
Confidence 8999999 9999999999999999 999999999999875
No 67
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.57 E-value=1.8e-14 Score=123.20 Aligned_cols=86 Identities=37% Similarity=0.569 Sum_probs=79.2
Q ss_pred HHHHHhcCCHHHHHHHHHhcCCCccccCCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCCCcCCCCCcHHHHHhcCCC
Q 006947 92 LMVAATYGSIDIIRLILSESGADVNLSCGNDKSTALHCAASGGALNAVDVVKLLLAAGADPNFVDAKGHHPVDVIVVPPK 171 (624)
Q Consensus 92 LhlAA~~G~~eiVklLL~~~GADVN~~~d~~G~TPLH~Aa~~G~~~~~eiVklLL~~GAD~n~~D~~G~TPLhlAa~~g~ 171 (624)
||+||..|+.+++++|++. +.+++. |.||||+|+..|+ .+++++|++.|++++.+|..|+||||+|+.
T Consensus 1 L~~A~~~~~~~~~~~ll~~-~~~~~~-----~~~~l~~A~~~~~---~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~--- 68 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLEK-GADINL-----GNTALHYAAENGN---LEIVKLLLENGADINSQDKNGNTALHYAAE--- 68 (89)
T ss_dssp HHHHHHTTTHHHHHHHHHT-TSTTTS-----SSBHHHHHHHTTT---HHHHHHHHHTTTCTT-BSTTSSBHHHHHHH---
T ss_pred CHHHHHcCCHHHHHHHHHC-cCCCCC-----CCCHHHHHHHcCC---HHHHHHHHHhcccccccCCCCCCHHHHHHH---
Confidence 7999999999999999997 888874 8899999999999 999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHCCCCCc
Q 006947 172 FQDVRLTLEELLATDGSVE 190 (624)
Q Consensus 172 ~~~~~~lLe~LL~~gadv~ 190 (624)
.+..+++++|+++|++++
T Consensus 69 -~~~~~~~~~Ll~~g~~~~ 86 (89)
T PF12796_consen 69 -NGNLEIVKLLLEHGADVN 86 (89)
T ss_dssp -TTHHHHHHHHHHTTT-TT
T ss_pred -cCCHHHHHHHHHcCCCCC
Confidence 677889999999999887
No 68
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.55 E-value=1.9e-14 Score=162.72 Aligned_cols=161 Identities=22% Similarity=0.264 Sum_probs=135.9
Q ss_pred CCCcccCccChHHHHHHHH---cCCHHHHHHHHhcCCCCCcccccccccccCCccccCCCCchHHHHHhcCCHHHHHHHH
Q 006947 32 NHLTVETDDAFASLLELAA---NNDVEGFKRSIVCDPSGVDEVGLWYGRQKGSKQMVNEQRTPLMVAATYGSIDIIRLIL 108 (624)
Q Consensus 32 ~~ini~d~dg~TpLh~AA~---~Gdle~Vk~LLe~~GadvN~~~l~~~~~~~~~~~D~~G~TPLhlAA~~G~~eiVklLL 108 (624)
.+++.+-.-|.|.||.|.. .++-++++.||+..+.-||..- ......|.||||+|+.+.+.++|++||
T Consensus 134 w~~~~RGa~GET~Lh~~lL~~~~~~n~la~~LL~~~p~lind~~---------~~eeY~GqSaLHiAIv~~~~~~V~lLl 204 (782)
T KOG3676|consen 134 WKLNERGATGETLLHKALLNLSDGHNELARVLLEIFPKLINDIY---------TSEEYYGQSALHIAIVNRDAELVRLLL 204 (782)
T ss_pred hccccccchhhhHHHHHHhcCchhHHHHHHHHHHHhHHHhhhhh---------hhHhhcCcchHHHHHHhccHHHHHHHH
Confidence 3344445679999999998 3455889999997666566542 112468999999999999999999999
Q ss_pred HhcCCCccccC--------C--------------CCCChHHHHHHhCCCCChHHHHHHHHHCCCCCCCcCCCCCcHHHHH
Q 006947 109 SESGADVNLSC--------G--------------NDKSTALHCAASGGALNAVDVVKLLLAAGADPNFVDAKGHHPVDVI 166 (624)
Q Consensus 109 ~~~GADVN~~~--------d--------------~~G~TPLH~Aa~~G~~~~~eiVklLL~~GAD~n~~D~~G~TPLhlA 166 (624)
+. ||||+++| | ..|..||-+||..++ .|+|++|+++|||++++|.+|+|.||..
T Consensus 205 ~~-gADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq---~eivrlLl~~gAd~~aqDS~GNTVLH~l 280 (782)
T KOG3676|consen 205 AA-GADVHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQ---PEIVRLLLAHGADPNAQDSNGNTVLHML 280 (782)
T ss_pred Hc-CCchhhHhhccccCcccccccccccCCcceeeeccCchHHHHHcCC---HHHHHHHHhcCCCCCccccCCChHHHHH
Confidence 99 99999864 1 247889999999999 9999999999999999999999999999
Q ss_pred hcCCChhhHHHHHHHHHHCCCCCcccccccccccCCCCChhhhhhhcC
Q 006947 167 VVPPKFQDVRLTLEELLATDGSVERNLRVSTTTSNSNSPPLSPALENG 214 (624)
Q Consensus 167 a~~g~~~~~~~lLe~LL~~gadv~~~~~l~~a~~~~g~TpL~lA~e~G 214 (624)
+. ....++..++++.|++ .+....++.|.|||.+|++.|
T Consensus 281 Vi----~~~~~My~~~L~~ga~-----~l~~v~N~qgLTPLtLAaklG 319 (782)
T KOG3676|consen 281 VI----HFVTEMYDLALELGAN-----ALEHVRNNQGLTPLTLAAKLG 319 (782)
T ss_pred HH----HHHHHHHHHHHhcCCC-----ccccccccCCCChHHHHHHhh
Confidence 98 6788899999999998 344488999999999999998
No 69
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.53 E-value=9.5e-14 Score=134.06 Aligned_cols=132 Identities=33% Similarity=0.400 Sum_probs=116.5
Q ss_pred CCCcccCccChHHHHHHHHcCCHHHHHHHHhcCCCCCcccccccccccCCccccCCCCchHHHHHhcCC-----HHHHHH
Q 006947 32 NHLTVETDDAFASLLELAANNDVEGFKRSIVCDPSGVDEVGLWYGRQKGSKQMVNEQRTPLMVAATYGS-----IDIIRL 106 (624)
Q Consensus 32 ~~ini~d~dg~TpLh~AA~~Gdle~Vk~LLe~~GadvN~~~l~~~~~~~~~~~D~~G~TPLhlAA~~G~-----~eiVkl 106 (624)
......+..+.++++.++..++.+.++.++. .+++++.. +.+|.||||+|+..|+ .+++++
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~-------------~~~g~t~l~~a~~~~~~~~~~~~~~~~ 129 (235)
T COG0666 64 RHLAARDLDGRLPLHSAASKGDDKIVKLLLA-SGADVNAK-------------DADGDTPLHLAALNGNPPEGNIEVAKL 129 (235)
T ss_pred cccccCCccccCHHHHHHHcCcHHHHHHHHH-cCCCcccc-------------cCCCCcHHHHHHhcCCcccchHHHHHH
Confidence 3344555668999999999999999999998 99999876 7999999999999999 999999
Q ss_pred HHHhcCC---CccccCCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCCCcCCCCCcHHHHHhcCCChhhHHHHHHHHH
Q 006947 107 ILSESGA---DVNLSCGNDKSTALHCAASGGALNAVDVVKLLLAAGADPNFVDAKGHHPVDVIVVPPKFQDVRLTLEELL 183 (624)
Q Consensus 107 LL~~~GA---DVN~~~d~~G~TPLH~Aa~~G~~~~~eiVklLL~~GAD~n~~D~~G~TPLhlAa~~g~~~~~~~lLe~LL 183 (624)
||+. |+ +.+.+ +..|.||||+|+..|+ .+++++|++.|++++.++..|.|++++|+. .+...+++.++
T Consensus 130 ll~~-g~~~~~~~~~-~~~g~tpl~~A~~~~~---~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~----~~~~~~~~~l~ 200 (235)
T COG0666 130 LLEA-GADLDVNNLR-DEDGNTPLHWAALNGD---ADIVELLLEAGADPNSRNSYGVTALDPAAK----NGRIELVKLLL 200 (235)
T ss_pred HHHc-CCCCCCcccc-CCCCCchhHHHHHcCc---hHHHHHHHhcCCCCcccccCCCcchhhhcc----cchHHHHHHHH
Confidence 9999 88 55555 9999999999999999 899999999999999999999999999999 55666666666
Q ss_pred HCC
Q 006947 184 ATD 186 (624)
Q Consensus 184 ~~g 186 (624)
+.+
T Consensus 201 ~~~ 203 (235)
T COG0666 201 DKG 203 (235)
T ss_pred hcC
Confidence 654
No 70
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.52 E-value=3.3e-14 Score=154.48 Aligned_cols=143 Identities=25% Similarity=0.340 Sum_probs=127.9
Q ss_pred HHHHHHHHcCCHHHHHHHHhcCCCCCcccccccccccCCccccCCCCchHHHHHhcCCHHHHHHHHHhcCCCccccCCCC
Q 006947 43 ASLLELAANNDVEGFKRSIVCDPSGVDEVGLWYGRQKGSKQMVNEQRTPLMVAATYGSIDIIRLILSESGADVNLSCGND 122 (624)
Q Consensus 43 TpLh~AA~~Gdle~Vk~LLe~~GadvN~~~l~~~~~~~~~~~D~~G~TPLhlAA~~G~~eiVklLL~~~GADVN~~~d~~ 122 (624)
-.++.|+..|+.+-|..||. .|+++|.. +.+|.|+||-+|.-.+.+||++|+++ |++||.. |..
T Consensus 42 a~~l~A~~~~d~~ev~~ll~-~ga~~~~~-------------n~DglTalhq~~id~~~e~v~~l~e~-ga~Vn~~-d~e 105 (527)
T KOG0505|consen 42 AVFLEACSRGDLEEVRKLLN-RGASPNLC-------------NVDGLTALHQACIDDNLEMVKFLVEN-GANVNAQ-DNE 105 (527)
T ss_pred HHHHhccccccHHHHHHHhc-cCCCcccc-------------CCccchhHHHHHhcccHHHHHHHHHh-cCCcccc-ccc
Confidence 45899999999999999999 88888776 58999999999999999999999999 9999999 999
Q ss_pred CChHHHHHHhCCCCChHHHHHHHHHCCCCCCCcC----------------------------------------------
Q 006947 123 KSTALHCAASGGALNAVDVVKLLLAAGADPNFVD---------------------------------------------- 156 (624)
Q Consensus 123 G~TPLH~Aa~~G~~~~~eiVklLL~~GAD~n~~D---------------------------------------------- 156 (624)
||||||.|+..|+ ..++++|+.+||++-.++
T Consensus 106 ~wtPlhaaascg~---~~i~~~li~~gA~~~avNsdg~~P~dl~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~ 182 (527)
T KOG0505|consen 106 GWTPLHAAASCGY---LNIVEYLIQHGANLLAVNSDGNMPYDLAEDEATLDVLETEMARQGIDIEAARKAEEQTMLDDAR 182 (527)
T ss_pred cCCcchhhccccc---HHHHHHHHHhhhhhhhccCCCCCccccccCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHH
Confidence 9999999999999 999999999887765543
Q ss_pred -------------CCCCcHHHHHhcCCChhhHHHHHHHHHHCCCCCcccccccccccCCCCChhhhhhhcCC
Q 006947 157 -------------AKGHHPVDVIVVPPKFQDVRLTLEELLATDGSVERNLRVSTTTSNSNSPPLSPALENGS 215 (624)
Q Consensus 157 -------------~~G~TPLhlAa~~g~~~~~~~lLe~LL~~gadv~~~~~l~~a~~~~g~TpL~lA~e~Gs 215 (624)
..|-|.||+|+. .+..+++++|++.|.+++ +.+..|+||||.|+--|.
T Consensus 183 q~l~~G~~~d~~~~rG~T~lHvAaa----~Gy~e~~~lLl~ag~~~~-------~~D~dgWtPlHAAA~Wg~ 243 (527)
T KOG0505|consen 183 QWLNAGAELDARHARGATALHVAAA----NGYTEVAALLLQAGYSVN-------IKDYDGWTPLHAAAHWGQ 243 (527)
T ss_pred HHHhccccccccccccchHHHHHHh----hhHHHHHHHHHHhccCcc-------cccccCCCcccHHHHhhh
Confidence 337888999988 788889999999999998 889999999998876663
No 71
>PHA02792 ankyrin-like protein; Provisional
Probab=99.52 E-value=9.8e-14 Score=156.98 Aligned_cols=131 Identities=18% Similarity=0.172 Sum_probs=112.1
Q ss_pred ChHHHHHHHHcCCHHHHHHHHhcCCCCCcccccccccccCCccccCC--CCchHHHHHhcCCH---HHHHHHHHhcCCCc
Q 006947 41 AFASLLELAANNDVEGFKRSIVCDPSGVDEVGLWYGRQKGSKQMVNE--QRTPLMVAATYGSI---DIIRLILSESGADV 115 (624)
Q Consensus 41 g~TpLh~AA~~Gdle~Vk~LLe~~GadvN~~~l~~~~~~~~~~~D~~--G~TPLhlAA~~G~~---eiVklLL~~~GADV 115 (624)
....++.||..|+.++|+.|++ .|+++|.. |.+ +.||||+|+..... +++++|+++ |||+
T Consensus 339 ~~n~~~~Aa~~gn~eIVelLIs-~GADIN~k-------------D~~g~~~TpLh~A~~n~~~~v~~IlklLIs~-GADI 403 (631)
T PHA02792 339 HINKYFQKFDNRDPKVVEYILK-NGNVVVED-------------DDNIINIMPLFPTLSIHESDVLSILKLCKPY-IDDI 403 (631)
T ss_pred cchHHHHHHHcCCHHHHHHHHH-cCCchhhh-------------cCCCCChhHHHHHHHhccHhHHHHHHHHHhc-CCcc
Confidence 5667999999999999999999 99999987 344 57999998877664 468889988 9999
Q ss_pred cccCCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCCCcCCCCCcHHHHHhc--CCC----hhhHHHHHHHHHHCCCCC
Q 006947 116 NLSCGNDKSTALHCAASGGALNAVDVVKLLLAAGADPNFVDAKGHHPVDVIVV--PPK----FQDVRLTLEELLATDGSV 189 (624)
Q Consensus 116 N~~~d~~G~TPLH~Aa~~G~~~~~eiVklLL~~GAD~n~~D~~G~TPLhlAa~--~g~----~~~~~~lLe~LL~~gadv 189 (624)
|.+ +..|.||||+|+..++ .+++++|+++|+|++.+|..|+||||+|+. .+. .+...++++.|++++.++
T Consensus 404 N~k-D~~G~TPLh~Aa~~~n---~eivelLLs~GADIN~kD~~G~TpL~~A~~~~~~~~~~i~~~~~~il~lLLs~~p~i 479 (631)
T PHA02792 404 NKI-DKHGRSILYYCIESHS---VSLVEWLIDNGADINITTKYGSTCIGICVILAHACIPEIAELYIKILEIILSKLPTI 479 (631)
T ss_pred ccc-cccCcchHHHHHHcCC---HHHHHHHHHCCCCCCCcCCCCCCHHHHHHHHHhcccHHHHHHHHHHHHHHHhcCCCh
Confidence 999 9999999999999999 999999999999999999999999999975 211 123466899999998776
Q ss_pred c
Q 006947 190 E 190 (624)
Q Consensus 190 ~ 190 (624)
.
T Consensus 480 ~ 480 (631)
T PHA02792 480 E 480 (631)
T ss_pred h
Confidence 5
No 72
>PHA02792 ankyrin-like protein; Provisional
Probab=99.49 E-value=1.9e-13 Score=154.73 Aligned_cols=141 Identities=14% Similarity=0.087 Sum_probs=119.7
Q ss_pred HHHHHHHHcC--CHHHHHHHHhcCCCCCcccccccccccCCccccCCCCchHHHHHhcCCHHHHHHHHHhcCCCccccCC
Q 006947 43 ASLLELAANN--DVEGFKRSIVCDPSGVDEVGLWYGRQKGSKQMVNEQRTPLMVAATYGSIDIIRLILSESGADVNLSCG 120 (624)
Q Consensus 43 TpLh~AA~~G--dle~Vk~LLe~~GadvN~~~l~~~~~~~~~~~D~~G~TPLhlAA~~G~~eiVklLL~~~GADVN~~~d 120 (624)
-.||.-...+ +.++++.||+ .|++++. ..+...++.||..|+.++|++|+++ |||+|.+ +
T Consensus 308 ~~l~~Yl~~~~v~ieiIK~LId-~Ga~~~r---------------~~~~n~~~~Aa~~gn~eIVelLIs~-GADIN~k-D 369 (631)
T PHA02792 308 DLLSEYVSYHTVYINVIKCMID-EGATLYR---------------FKHINKYFQKFDNRDPKVVEYILKN-GNVVVED-D 369 (631)
T ss_pred HHHHHHHhcCCccHHHHHHHHH-CCCcccc---------------CCcchHHHHHHHcCCHHHHHHHHHc-CCchhhh-c
Confidence 3477777777 8889999999 8888652 2345679999999999999999999 9999998 7
Q ss_pred CCC--ChHHHHHHhCCCCChHHHHHHHHHCCCCCCCcCCCCCcHHHHHhcCCChhhHHHHHHHHHHCCCCCccccccccc
Q 006947 121 NDK--STALHCAASGGALNAVDVVKLLLAAGADPNFVDAKGHHPVDVIVVPPKFQDVRLTLEELLATDGSVERNLRVSTT 198 (624)
Q Consensus 121 ~~G--~TPLH~Aa~~G~~~~~eiVklLL~~GAD~n~~D~~G~TPLhlAa~~g~~~~~~~lLe~LL~~gadv~~~~~l~~a 198 (624)
.+| .||||+|+........+++++|+++|||+|.+|..|.||||+|+. .+..+++++|+++|++++ .
T Consensus 370 ~~g~~~TpLh~A~~n~~~~v~~IlklLIs~GADIN~kD~~G~TPLh~Aa~----~~n~eivelLLs~GADIN-------~ 438 (631)
T PHA02792 370 DNIINIMPLFPTLSIHESDVLSILKLCKPYIDDINKIDKHGRSILYYCIE----SHSVSLVEWLIDNGADIN-------I 438 (631)
T ss_pred CCCCChhHHHHHHHhccHhHHHHHHHHHhcCCccccccccCcchHHHHHH----cCCHHHHHHHHHCCCCCC-------C
Confidence 664 699999887766333457899999999999999999999999998 556788999999999998 7
Q ss_pred ccCCCCChhhhhhh
Q 006947 199 TSNSNSPPLSPALE 212 (624)
Q Consensus 199 ~~~~g~TpL~lA~e 212 (624)
.+..|.|||++|..
T Consensus 439 kD~~G~TpL~~A~~ 452 (631)
T PHA02792 439 TTKYGSTCIGICVI 452 (631)
T ss_pred cCCCCCCHHHHHHH
Confidence 88999999999976
No 73
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.49 E-value=6.1e-14 Score=156.94 Aligned_cols=153 Identities=21% Similarity=0.207 Sum_probs=135.8
Q ss_pred HHHHHHHHcCCHHHHHHHHhcCCCCCcccc--cccccccCCccccCCCCchHHHHHhcCCHHHHHHHHHhcCCCccccCC
Q 006947 43 ASLLELAANNDVEGFKRSIVCDPSGVDEVG--LWYGRQKGSKQMVNEQRTPLMVAATYGSIDIIRLILSESGADVNLSCG 120 (624)
Q Consensus 43 TpLh~AA~~Gdle~Vk~LLe~~GadvN~~~--l~~~~~~~~~~~D~~G~TPLhlAA~~G~~eiVklLL~~~GADVN~~~d 120 (624)
+-|..|+..||++.+..||+..+. ..+ +...+....+..|.+|.|+||.||.+|+.+++++|++. .+-++.. +
T Consensus 5 qel~~a~ka~d~~tva~ll~~~~~---r~~~l~~~trsds~n~qd~~gfTalhha~Lng~~~is~llle~-ea~ldl~-d 79 (854)
T KOG0507|consen 5 QELIDACKAGDYDTVALLLSSKKG---RSGLLFFTTRSDSHNLQDYSGFTLLHHAVLNGQNQISKLLLDY-EALLDLC-D 79 (854)
T ss_pred hhHHHhhhcccHHHHHHhccCCCC---CCCCCCCCCCCccccccCccchhHHHHHHhcCchHHHHHHhcc-hhhhhhh-h
Confidence 568999999999999999995444 222 23345556677899999999999999999999999998 7888887 8
Q ss_pred CCCChHHHHHHhCCCCChHHHHHHHHHCCCCCCCcCCCCCcHHHHHhcCCChhhHHHHHHHHHHCCCCCccccccccccc
Q 006947 121 NDKSTALHCAASGGALNAVDVVKLLLAAGADPNFVDAKGHHPVDVIVVPPKFQDVRLTLEELLATDGSVERNLRVSTTTS 200 (624)
Q Consensus 121 ~~G~TPLH~Aa~~G~~~~~eiVklLL~~GAD~n~~D~~G~TPLhlAa~~g~~~~~~~lLe~LL~~gadv~~~~~l~~a~~ 200 (624)
..|.+|||+|++.|+ .|+|++||..+..+|+.+..|.||||.|+. .+..+++++|+++|++.. ..+
T Consensus 80 ~kg~~plhlaaw~g~---~e~vkmll~q~d~~na~~~e~~tplhlaaq----hgh~dvv~~Ll~~~adp~-------i~n 145 (854)
T KOG0507|consen 80 TKGILPLHLAAWNGN---LEIVKMLLLQTDILNAVNIENETPLHLAAQ----HGHLEVVFYLLKKNADPF-------IRN 145 (854)
T ss_pred ccCcceEEehhhcCc---chHHHHHHhcccCCCcccccCcCccchhhh----hcchHHHHHHHhcCCCcc-------ccC
Confidence 999999999999999 999999999999999999999999999999 666778999999999988 888
Q ss_pred CCCCChhhhhhhcC
Q 006947 201 NSNSPPLSPALENG 214 (624)
Q Consensus 201 ~~g~TpL~lA~e~G 214 (624)
+.+.|+|.+|++-|
T Consensus 146 ns~~t~ldlA~qfg 159 (854)
T KOG0507|consen 146 NSKETVLDLASRFG 159 (854)
T ss_pred cccccHHHHHHHhh
Confidence 99999999999988
No 74
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.46 E-value=7.6e-13 Score=116.46 Aligned_cols=115 Identities=37% Similarity=0.554 Sum_probs=103.8
Q ss_pred ccCCCCchHHHHHhcCCHHHHHHHHHhcCCCccccCCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCCCcCCCCCcHH
Q 006947 84 MVNEQRTPLMVAATYGSIDIIRLILSESGADVNLSCGNDKSTALHCAASGGALNAVDVVKLLLAAGADPNFVDAKGHHPV 163 (624)
Q Consensus 84 ~D~~G~TPLhlAA~~G~~eiVklLL~~~GADVN~~~d~~G~TPLH~Aa~~G~~~~~eiVklLL~~GAD~n~~D~~G~TPL 163 (624)
.+.+|.||||+|+..|+.+++++|++. |++++.. +..|.||||+|+..+. .+++++|++.|++++..+..|.||+
T Consensus 3 ~~~~g~t~l~~a~~~~~~~~i~~li~~-~~~~~~~-~~~g~~~l~~a~~~~~---~~~~~~ll~~~~~~~~~~~~~~~~l 77 (126)
T cd00204 3 RDEDGRTPLHLAASNGHLEVVKLLLEN-GADVNAK-DNDGRTPLHLAAKNGH---LEIVKLLLEKGADVNARDKDGNTPL 77 (126)
T ss_pred cCcCCCCHHHHHHHcCcHHHHHHHHHc-CCCCCcc-CCCCCcHHHHHHHcCC---HHHHHHHHHcCCCccccCCCCCCHH
Confidence 357899999999999999999999988 8988877 8899999999999999 9999999999999999999999999
Q ss_pred HHHhcCCChhhHHHHHHHHHHCCCCCcccccccccccCCCCChhhhhhhcC
Q 006947 164 DVIVVPPKFQDVRLTLEELLATDGSVERNLRVSTTTSNSNSPPLSPALENG 214 (624)
Q Consensus 164 hlAa~~g~~~~~~~lLe~LL~~gadv~~~~~l~~a~~~~g~TpL~lA~e~G 214 (624)
|+|+.. +...++++|++.+.+.+ ..+..+.|+++.|...+
T Consensus 78 ~~a~~~----~~~~~~~~L~~~~~~~~-------~~~~~~~~~l~~~~~~~ 117 (126)
T cd00204 78 HLAARN----GNLDVVKLLLKHGADVN-------ARDKDGRTPLHLAAKNG 117 (126)
T ss_pred HHHHHc----CcHHHHHHHHHcCCCCc-------ccCCCCCCHHHHHHhcC
Confidence 999984 45889999999887666 56678889999998875
No 75
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.44 E-value=3.6e-13 Score=152.45 Aligned_cols=137 Identities=21% Similarity=0.201 Sum_probs=115.6
Q ss_pred ccChHHHHHHHHcCCHHHHHHHHhcCCCCCccccccccccc----CC-ccc-----cCCCCchHHHHHhcCCHHHHHHHH
Q 006947 39 DDAFASLLELAANNDVEGFKRSIVCDPSGVDEVGLWYGRQK----GS-KQM-----VNEQRTPLMVAATYGSIDIIRLIL 108 (624)
Q Consensus 39 ~dg~TpLh~AA~~Gdle~Vk~LLe~~GadvN~~~l~~~~~~----~~-~~~-----D~~G~TPLhlAA~~G~~eiVklLL 108 (624)
..|.|+||.|+.+.|.+.|+.||+ .|+||+++...--... .. +.. -..|+.||-+||-.++.|||++|+
T Consensus 182 Y~GqSaLHiAIv~~~~~~V~lLl~-~gADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl 260 (782)
T KOG3676|consen 182 YYGQSALHIAIVNRDAELVRLLLA-AGADVHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLL 260 (782)
T ss_pred hcCcchHHHHHHhccHHHHHHHHH-cCCchhhHhhccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHH
Confidence 469999999999999999999999 9999998762111111 11 111 346889999999999999999999
Q ss_pred HhcCCCccccCCCCCChHHHHHHhCCCCChHHHHHHHHHCCCC--CCCcCCCCCcHHHHHhcCCChhhHHHHHHHHHHC
Q 006947 109 SESGADVNLSCGNDKSTALHCAASGGALNAVDVVKLLLAAGAD--PNFVDAKGHHPVDVIVVPPKFQDVRLTLEELLAT 185 (624)
Q Consensus 109 ~~~GADVN~~~d~~G~TPLH~Aa~~G~~~~~eiVklLL~~GAD--~n~~D~~G~TPLhlAa~~g~~~~~~~lLe~LL~~ 185 (624)
++ |||+|++ |..|+|.||..+..-. .++-.++|++|++ ...+|..|.|||.+|+. .+.+++.+++++.
T Consensus 261 ~~-gAd~~aq-DS~GNTVLH~lVi~~~---~~My~~~L~~ga~~l~~v~N~qgLTPLtLAak----lGk~emf~~ile~ 330 (782)
T KOG3676|consen 261 AH-GADPNAQ-DSNGNTVLHMLVIHFV---TEMYDLALELGANALEHVRNNQGLTPLTLAAK----LGKKEMFQHILER 330 (782)
T ss_pred hc-CCCCCcc-ccCCChHHHHHHHHHH---HHHHHHHHhcCCCccccccccCCCChHHHHHH----hhhHHHHHHHHHh
Confidence 98 9999999 9999999999998755 8999999999999 89999999999999999 5566666666666
No 76
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.40 E-value=1.2e-12 Score=133.15 Aligned_cols=121 Identities=29% Similarity=0.311 Sum_probs=108.6
Q ss_pred ccChHHHHHHHHcCCHHHHHHHHhcCCCCCcccccccccccCCccccCCCCchHHHHHhcCCHHHHHHHHHhcCCCcccc
Q 006947 39 DDAFASLLELAANNDVEGFKRSIVCDPSGVDEVGLWYGRQKGSKQMVNEQRTPLMVAATYGSIDIIRLILSESGADVNLS 118 (624)
Q Consensus 39 ~dg~TpLh~AA~~Gdle~Vk~LLe~~GadvN~~~l~~~~~~~~~~~D~~G~TPLhlAA~~G~~eiVklLL~~~GADVN~~ 118 (624)
.+-..+|++++.+||.+.+..||. .-..+|.+ |..|.|+|+.|+..|+.++|++||+. |||||..
T Consensus 10 d~~~~~Lle~i~Kndt~~a~~LLs-~vr~vn~~-------------D~sGMs~LahAaykGnl~~v~lll~~-gaDvN~~ 74 (396)
T KOG1710|consen 10 DAPKSPLLEAIDKNDTEAALALLS-TVRQVNQR-------------DPSGMSVLAHAAYKGNLTLVELLLEL-GADVNDK 74 (396)
T ss_pred cchhhHHHHHHccCcHHHHHHHHH-Hhhhhhcc-------------CCCcccHHHHHHhcCcHHHHHHHHHh-CCCcCcc
Confidence 345689999999999999999998 44446665 79999999999999999999999999 9999987
Q ss_pred CCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCCCcCCCCCcHHHHHhcCCChhhHHH
Q 006947 119 CGNDKSTALHCAASGGALNAVDVVKLLLAAGADPNFVDAKGHHPVDVIVVPPKFQDVRL 177 (624)
Q Consensus 119 ~d~~G~TPLH~Aa~~G~~~~~eiVklLL~~GAD~n~~D~~G~TPLhlAa~~g~~~~~~~ 177 (624)
.+..+.||||+||..|+ .++.++||+.||.+..+|.-|+|+-.+|+.-|+.+++..
T Consensus 75 qhg~~YTpLmFAALSGn---~dvcrllldaGa~~~~vNsvgrTAaqmAAFVG~H~CV~i 130 (396)
T KOG1710|consen 75 QHGTLYTPLMFAALSGN---QDVCRLLLDAGARMYLVNSVGRTAAQMAAFVGHHECVAI 130 (396)
T ss_pred cccccccHHHHHHHcCC---chHHHHHHhccCccccccchhhhHHHHHHHhcchHHHHH
Confidence 67789999999999999 999999999999999999999999999998777666543
No 77
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.37 E-value=2e-12 Score=149.75 Aligned_cols=106 Identities=29% Similarity=0.365 Sum_probs=98.6
Q ss_pred HHHHHHHHcCCHHHHHHHHhcCCCCCcccccccccccCCccccCCCCchHHHHHhcCCHHHHHHHHHhcCCCccccCCCC
Q 006947 43 ASLLELAANNDVEGFKRSIVCDPSGVDEVGLWYGRQKGSKQMVNEQRTPLMVAATYGSIDIIRLILSESGADVNLSCGND 122 (624)
Q Consensus 43 TpLh~AA~~Gdle~Vk~LLe~~GadvN~~~l~~~~~~~~~~~D~~G~TPLhlAA~~G~~eiVklLL~~~GADVN~~~d~~ 122 (624)
..|+.||..|+.+.|+.||+ .|+++|.. |.+|.||||+||..|+.++|++||+. |+|+|.+ +.+
T Consensus 84 ~~L~~aa~~G~~~~vk~LL~-~Gadin~~-------------d~~G~TpLh~Aa~~g~~eiv~~LL~~-Gadvn~~-d~~ 147 (664)
T PTZ00322 84 VELCQLAASGDAVGARILLT-GGADPNCR-------------DYDGRTPLHIACANGHVQVVRVLLEF-GADPTLL-DKD 147 (664)
T ss_pred HHHHHHHHcCCHHHHHHHHH-CCCCCCCc-------------CCCCCcHHHHHHHCCCHHHHHHHHHC-CCCCCCC-CCC
Confidence 45899999999999999999 99999987 68999999999999999999999998 9999999 999
Q ss_pred CChHHHHHHhCCCCChHHHHHHHHHC-------CCCCCCcCCCCCcHHHHHh
Q 006947 123 KSTALHCAASGGALNAVDVVKLLLAA-------GADPNFVDAKGHHPVDVIV 167 (624)
Q Consensus 123 G~TPLH~Aa~~G~~~~~eiVklLL~~-------GAD~n~~D~~G~TPLhlAa 167 (624)
|.||||+|+..|+ .+++++|+++ |++++..+..|.+|+..+.
T Consensus 148 G~TpLh~A~~~g~---~~iv~~Ll~~~~~~~~~ga~~~~~~~~g~~~~~~~~ 196 (664)
T PTZ00322 148 GKTPLELAEENGF---REVVQLLSRHSQCHFELGANAKPDSFTGKPPSLEDS 196 (664)
T ss_pred CCCHHHHHHHCCc---HHHHHHHHhCCCcccccCCCCCccccCCCCccchhh
Confidence 9999999999999 9999999999 9999999998888876654
No 78
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.37 E-value=1.5e-12 Score=140.58 Aligned_cols=122 Identities=25% Similarity=0.267 Sum_probs=101.7
Q ss_pred HHHHHHHHcCCHHHHHHHHhcCCCCCcccccccccccCCccccCCCCchHHHHHhcCCHHHHHHHHHhcCCCccccCCCC
Q 006947 43 ASLLELAANNDVEGFKRSIVCDPSGVDEVGLWYGRQKGSKQMVNEQRTPLMVAATYGSIDIIRLILSESGADVNLSCGND 122 (624)
Q Consensus 43 TpLh~AA~~Gdle~Vk~LLe~~GadvN~~~l~~~~~~~~~~~D~~G~TPLhlAA~~G~~eiVklLL~~~GADVN~~~d~~ 122 (624)
-.|+.|+..|.+|+|+.+|. .--|+... +.+|.|+||-|+-.||.+||+|||+. |++||.. |.+
T Consensus 552 aLLLDaaLeGEldlVq~~i~-ev~DpSqp-------------NdEGITaLHNAiCaghyeIVkFLi~~-ganVNa~-DSd 615 (752)
T KOG0515|consen 552 ALLLDAALEGELDLVQRIIY-EVTDPSQP-------------NDEGITALHNAICAGHYEIVKFLIEF-GANVNAA-DSD 615 (752)
T ss_pred HHHHhhhhcchHHHHHHHHH-hhcCCCCC-------------CccchhHHhhhhhcchhHHHHHHHhc-CCcccCc-cCC
Confidence 45889999999999999998 44444444 58999999999999999999999998 9999999 999
Q ss_pred CChHHHHHHhCCCCChHHHHHHHHHCCCCCCCcCC-CCCcHHHHHhcCCChhhHHHHHHHHHHC
Q 006947 123 KSTALHCAASGGALNAVDVVKLLLAAGADPNFVDA-KGHHPVDVIVVPPKFQDVRLTLEELLAT 185 (624)
Q Consensus 123 G~TPLH~Aa~~G~~~~~eiVklLL~~GAD~n~~D~-~G~TPLhlAa~~g~~~~~~~lLe~LL~~ 185 (624)
|||||||||..++ +.+++.|++.||-|-+... ++.|+..-.-. ..++...+.++|...
T Consensus 616 GWTPLHCAASCNn---v~~ckqLVe~GaavfAsTlSDmeTa~eKCee--~eeGY~~CsqyL~~v 674 (752)
T KOG0515|consen 616 GWTPLHCAASCNN---VPMCKQLVESGAAVFASTLSDMETAAEKCEE--MEEGYDQCSQYLYGV 674 (752)
T ss_pred CCchhhhhhhcCc---hHHHHHHHhccceEEeeecccccchhhhcch--hhhhHHHHHHHHHHH
Confidence 9999999999888 9999999999998876554 67888765433 346677777777543
No 79
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=99.30 E-value=2.4e-12 Score=147.56 Aligned_cols=150 Identities=27% Similarity=0.348 Sum_probs=126.9
Q ss_pred CccChHHHHHHHHcCCHHHHHHHHhcCCCCCcccccccccccCCccccCCCCchHHHHHhcCCHHHHHHHHHhcCCCccc
Q 006947 38 TDDAFASLLELAANNDVEGFKRSIVCDPSGVDEVGLWYGRQKGSKQMVNEQRTPLMVAATYGSIDIIRLILSESGADVNL 117 (624)
Q Consensus 38 d~dg~TpLh~AA~~Gdle~Vk~LLe~~GadvN~~~l~~~~~~~~~~~D~~G~TPLhlAA~~G~~eiVklLL~~~GADVN~ 117 (624)
..+-.|+|-.||+.|+.|.|.+||. +|+++..+ |+.|.+||.+|+..||..+|+.||.+ .++|+.
T Consensus 754 e~n~~t~LT~acaggh~e~vellv~-rganiehr-------------dkkgf~plImaatagh~tvV~~llk~-ha~vea 818 (2131)
T KOG4369|consen 754 EPNIKTNLTSACAGGHREEVELLVV-RGANIEHR-------------DKKGFVPLIMAATAGHITVVQDLLKA-HADVEA 818 (2131)
T ss_pred CccccccccccccCccHHHHHHHHH-hccccccc-------------ccccchhhhhhcccCchHHHHHHHhh-hhhhhh
Confidence 3445688999999999999999998 88888876 79999999999999999999999988 699999
Q ss_pred cCCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCCCcCCCCCcHHHHHhcCCChhhHHHHHHHHHHCCCCCcccccccc
Q 006947 118 SCGNDKSTALHCAASGGALNAVDVVKLLLAAGADPNFVDAKGHHPVDVIVVPPKFQDVRLTLEELLATDGSVERNLRVST 197 (624)
Q Consensus 118 ~~d~~G~TPLH~Aa~~G~~~~~eiVklLL~~GAD~n~~D~~G~TPLhlAa~~g~~~~~~~lLe~LL~~gadv~~~~~l~~ 197 (624)
+.|..+.|+|.+||.+|. .++|++||.+||+-..++....|||.+|.. .+..++|..|+..|+.++..
T Consensus 819 Qsdrtkdt~lSlacsggr---~~vvelLl~~gankehrnvsDytPlsla~S----ggy~~iI~~llS~GseInSr----- 886 (2131)
T KOG4369|consen 819 QSDRTKDTMLSLACSGGR---TRVVELLLNAGANKEHRNVSDYTPLSLARS----GGYTKIIHALLSSGSEINSR----- 886 (2131)
T ss_pred hcccccCceEEEecCCCc---chHHHHHHHhhccccccchhhcCchhhhcC----cchHHHHHHHhhcccccccc-----
Confidence 888999999999999999 999999999999999999999999999988 67888999999999888722
Q ss_pred cccCCCCChhhhhhhcC
Q 006947 198 TTSNSNSPPLSPALENG 214 (624)
Q Consensus 198 a~~~~g~TpL~lA~e~G 214 (624)
+...-|..||.+|..+|
T Consensus 887 tgSklgisPLmlatmng 903 (2131)
T KOG4369|consen 887 TGSKLGISPLMLATMNG 903 (2131)
T ss_pred cccccCcchhhhhhhcc
Confidence 23334444555444443
No 80
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.28 E-value=1.1e-11 Score=107.30 Aligned_cols=90 Identities=26% Similarity=0.317 Sum_probs=84.5
Q ss_pred hHHHHHhcCCHHHHHHHHHhcCCCccccCCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCCCcCCCCCcHHHHHhcCC
Q 006947 91 PLMVAATYGSIDIIRLILSESGADVNLSCGNDKSTALHCAASGGALNAVDVVKLLLAAGADPNFVDAKGHHPVDVIVVPP 170 (624)
Q Consensus 91 PLhlAA~~G~~eiVklLL~~~GADVN~~~d~~G~TPLH~Aa~~G~~~~~eiVklLL~~GAD~n~~D~~G~TPLhlAa~~g 170 (624)
-++|++.+|.++-|+-.+.. |.+||.. ..|+||||+|+-.|+ .+++++|+..||+++.+|+.|-|||--|+.
T Consensus 5 ~~~W~vkNG~~DeVk~~v~~-g~nVn~~--~ggR~plhyAAD~GQ---l~ilefli~iGA~i~~kDKygITPLLsAvw-- 76 (117)
T KOG4214|consen 5 SVAWNVKNGEIDEVKQSVNE-GLNVNEI--YGGRTPLHYAADYGQ---LSILEFLISIGANIQDKDKYGITPLLSAVW-- 76 (117)
T ss_pred hHhhhhccCcHHHHHHHHHc-cccHHHH--hCCcccchHhhhcch---HHHHHHHHHhccccCCccccCCcHHHHHHH--
Confidence 47899999999999999988 8999976 589999999999999 999999999999999999999999999998
Q ss_pred ChhhHHHHHHHHHHCCCCCc
Q 006947 171 KFQDVRLTLEELLATDGSVE 190 (624)
Q Consensus 171 ~~~~~~~lLe~LL~~gadv~ 190 (624)
+++..++++|++.|++..
T Consensus 77 --EGH~~cVklLL~~GAdrt 94 (117)
T KOG4214|consen 77 --EGHRDCVKLLLQNGADRT 94 (117)
T ss_pred --HhhHHHHHHHHHcCcccc
Confidence 888999999999999887
No 81
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.27 E-value=9.2e-12 Score=97.61 Aligned_cols=54 Identities=48% Similarity=0.779 Sum_probs=45.8
Q ss_pred CCchHHHHHhcCCHHHHHHHHHhcCCCccccCCCCCChHHHHHHhCCCCChHHHHHHHH
Q 006947 88 QRTPLMVAATYGSIDIIRLILSESGADVNLSCGNDKSTALHCAASGGALNAVDVVKLLL 146 (624)
Q Consensus 88 G~TPLhlAA~~G~~eiVklLL~~~GADVN~~~d~~G~TPLH~Aa~~G~~~~~eiVklLL 146 (624)
|+||||+||..|+.+++++|+++ |+|+|.+ |.+|.||||+|+..|+ .+++++||
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~-~~din~~-d~~g~t~lh~A~~~g~---~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEH-GADINAQ-DEDGRTPLHYAAKNGN---IDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHT-TSGTT-B--TTS--HHHHHHHTT----HHHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHC-CCCCCCC-CCCCCCHHHHHHHccC---HHHHHHHC
Confidence 68999999999999999999999 9999999 9999999999999999 99999986
No 82
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.25 E-value=6.6e-11 Score=114.17 Aligned_cols=118 Identities=35% Similarity=0.463 Sum_probs=104.6
Q ss_pred cCCCCchHHHHHhcCCHHHHHHHHHhcCCCccccCCCCCChHHHHHHhCCC--CChHHHHHHHHHCCC---CCCCcCCCC
Q 006947 85 VNEQRTPLMVAATYGSIDIIRLILSESGADVNLSCGNDKSTALHCAASGGA--LNAVDVVKLLLAAGA---DPNFVDAKG 159 (624)
Q Consensus 85 D~~G~TPLhlAA~~G~~eiVklLL~~~GADVN~~~d~~G~TPLH~Aa~~G~--~~~~eiVklLL~~GA---D~n~~D~~G 159 (624)
+..+.+++|.|+..+..+++++|+.. |++++.+ +.+|.||||+|+..|+ ....+++++||+.|+ +.+..|..|
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~-~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~g 147 (235)
T COG0666 70 DLDGRLPLHSAASKGDDKIVKLLLAS-GADVNAK-DADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDEDG 147 (235)
T ss_pred CccccCHHHHHHHcCcHHHHHHHHHc-CCCcccc-cCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccCCCC
Confidence 56789999999999999999999988 9999988 9999999999999886 123699999999999 666679999
Q ss_pred CcHHHHHhcCCChhhHHHHHHHHHHCCCCCcccccccccccCCCCChhhhhhhcCC
Q 006947 160 HHPVDVIVVPPKFQDVRLTLEELLATDGSVERNLRVSTTTSNSNSPPLSPALENGS 215 (624)
Q Consensus 160 ~TPLhlAa~~g~~~~~~~lLe~LL~~gadv~~~~~l~~a~~~~g~TpL~lA~e~Gs 215 (624)
+||||+|+..| ...+++.|++.+++++ ..+..|.|+++++...|.
T Consensus 148 ~tpl~~A~~~~----~~~~~~~ll~~~~~~~-------~~~~~g~t~l~~a~~~~~ 192 (235)
T COG0666 148 NTPLHWAALNG----DADIVELLLEAGADPN-------SRNSYGVTALDPAAKNGR 192 (235)
T ss_pred CchhHHHHHcC----chHHHHHHHhcCCCCc-------ccccCCCcchhhhcccch
Confidence 99999999954 4489999999999988 558899999999999884
No 83
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.25 E-value=4.8e-12 Score=100.40 Aligned_cols=56 Identities=43% Similarity=0.593 Sum_probs=30.2
Q ss_pred HHHhcCCCccccCCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCCCcCCCCCcHHHHH
Q 006947 107 ILSESGADVNLSCGNDKSTALHCAASGGALNAVDVVKLLLAAGADPNFVDAKGHHPVDVI 166 (624)
Q Consensus 107 LL~~~GADVN~~~d~~G~TPLH~Aa~~G~~~~~eiVklLL~~GAD~n~~D~~G~TPLhlA 166 (624)
||+++.+++|.+ |..|.||||+||..|+ .++|++||+.|+|++.+|..|+||||+|
T Consensus 1 LL~~~~~~~n~~-d~~G~T~LH~A~~~g~---~~~v~~Ll~~g~d~~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 1 LLEHGPADVNAQ-DKYGNTPLHWAARYGH---SEVVRLLLQNGADPNAKDKDGQTPLHYA 56 (56)
T ss_dssp -----T--TT----TTS--HHHHHHHHT----HHHHHHHHHCT--TT---TTS--HHHH-
T ss_pred CCccCcCCCcCc-CCCCCcHHHHHHHcCc---HHHHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence 566622888888 8888888888888888 8888888888888888888888888886
No 84
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.24 E-value=2.5e-11 Score=140.72 Aligned_cols=87 Identities=33% Similarity=0.478 Sum_probs=81.5
Q ss_pred chHHHHHhcCCHHHHHHHHHhcCCCccccCCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCCCcCCCCCcHHHHHhcC
Q 006947 90 TPLMVAATYGSIDIIRLILSESGADVNLSCGNDKSTALHCAASGGALNAVDVVKLLLAAGADPNFVDAKGHHPVDVIVVP 169 (624)
Q Consensus 90 TPLhlAA~~G~~eiVklLL~~~GADVN~~~d~~G~TPLH~Aa~~G~~~~~eiVklLL~~GAD~n~~D~~G~TPLhlAa~~ 169 (624)
+.||.||..|+.++|++||+. |+++|.+ +..|.||||+|+..|+ .++|++||++|+|++.+|..|.||||+|+.
T Consensus 84 ~~L~~aa~~G~~~~vk~LL~~-Gadin~~-d~~G~TpLh~Aa~~g~---~eiv~~LL~~Gadvn~~d~~G~TpLh~A~~- 157 (664)
T PTZ00322 84 VELCQLAASGDAVGARILLTG-GADPNCR-DYDGRTPLHIACANGH---VQVVRVLLEFGADPTLLDKDGKTPLELAEE- 157 (664)
T ss_pred HHHHHHHHcCCHHHHHHHHHC-CCCCCCc-CCCCCcHHHHHHHCCC---HHHHHHHHHCCCCCCCCCCCCCCHHHHHHH-
Confidence 458999999999999999998 9999999 9999999999999999 999999999999999999999999999998
Q ss_pred CChhhHHHHHHHHHHC
Q 006947 170 PKFQDVRLTLEELLAT 185 (624)
Q Consensus 170 g~~~~~~~lLe~LL~~ 185 (624)
.+..+++++|+++
T Consensus 158 ---~g~~~iv~~Ll~~ 170 (664)
T PTZ00322 158 ---NGFREVVQLLSRH 170 (664)
T ss_pred ---CCcHHHHHHHHhC
Confidence 5666788888887
No 85
>KOG1677 consensus CCCH-type Zn-finger protein [General function prediction only]
Probab=99.21 E-value=1.1e-11 Score=132.04 Aligned_cols=90 Identities=31% Similarity=0.648 Sum_probs=72.7
Q ss_pred CCCCccCCCCCCCcccc---------cCCCCCCcccccCCCCC-CCCcCCC-CCccccccccceee------c--CCCcc
Q 006947 276 SHDWTECPFVHPGENAR---------RRDPRKFHYSCVPCPDF-RKGACRR-GDMCEYAHGVFECW------L--HPAQY 336 (624)
Q Consensus 276 sh~w~~Cpf~H~~~~~r---------Rr~p~~~~y~~~~C~~~-~~g~C~~-gd~C~~aH~~~E~~------~--hP~~y 336 (624)
+-....|+|.|+....+ +++|. .|++.+|..| ++|.|+| |++|.|+|+++|++ . .|.+|
T Consensus 98 ~~~~s~~~~~~p~~~~~~~~~~~~~~~~~p~--~~kt~lc~~~~~~g~c~y~ge~crfah~~~e~r~~~~~~~~~~~~~~ 175 (332)
T KOG1677|consen 98 CGYGSSCRYNHPDLRLRPRPVRRSRGERKPE--RYKTPLCRSFRKSGTCKYRGEQCRFAHGLEELRLPSSENQVGNPPKY 175 (332)
T ss_pred CCCCCCCCccCcccccccCCccccccccCcc--cccCCcceeeecCccccccCchhhhcCCcccccccccchhhcCCCCC
Confidence 33334899999752222 23333 8999999999 5799999 99999999999998 2 36699
Q ss_pred ccccccCC---CCCCCCc-cCCCCCCCCccCcccC
Q 006947 337 RTRLCKDG---TSCARRV-CFFAHTPEELRPLYVS 367 (624)
Q Consensus 337 kT~~C~~~---~~C~~~~-C~FaH~~~elr~~~~~ 367 (624)
||++|.+| |.|+|+. |.|+|...|.+.....
T Consensus 176 kt~lC~~f~~tG~C~yG~rC~F~H~~~~~~~~~~~ 210 (332)
T KOG1677|consen 176 KTKLCPKFQKTGLCKYGSRCRFIHGEPEDRASNRH 210 (332)
T ss_pred CCcCCCccccCCCCCCCCcCeecCCCccccccccC
Confidence 99999988 8999985 9999999999987653
No 86
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.18 E-value=1.8e-11 Score=97.16 Aligned_cols=45 Identities=42% Similarity=0.595 Sum_probs=31.0
Q ss_pred ccCCCCchHHHHHhcCCHHHHHHHHHhcCCCccccCCCCCChHHHHH
Q 006947 84 MVNEQRTPLMVAATYGSIDIIRLILSESGADVNLSCGNDKSTALHCA 130 (624)
Q Consensus 84 ~D~~G~TPLhlAA~~G~~eiVklLL~~~GADVN~~~d~~G~TPLH~A 130 (624)
.|..|+||||+||.+|+.++|++||+. |+|++.+ +.+|+||||+|
T Consensus 12 ~d~~G~T~LH~A~~~g~~~~v~~Ll~~-g~d~~~~-d~~G~Tpl~~A 56 (56)
T PF13857_consen 12 QDKYGNTPLHWAARYGHSEVVRLLLQN-GADPNAK-DKDGQTPLHYA 56 (56)
T ss_dssp --TTS--HHHHHHHHT-HHHHHHHHHC-T--TT----TTS--HHHH-
T ss_pred cCCCCCcHHHHHHHcCcHHHHHHHHHC-cCCCCCC-cCCCCCHHHhC
Confidence 379999999999999999999999966 9999999 99999999997
No 87
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=99.17 E-value=2.3e-11 Score=139.71 Aligned_cols=126 Identities=20% Similarity=0.277 Sum_probs=87.7
Q ss_pred cCccccCCCCcccCccChHHHHHHHHcCCHHHHHHHHhcCCCCCcccccccccccCCccccCCCCchHHHHHhcCCHHHH
Q 006947 25 RHTNVDMNHLTVETDDAFASLLELAANNDVEGFKRSIVCDPSGVDEVGLWYGRQKGSKQMVNEQRTPLMVAATYGSIDII 104 (624)
Q Consensus 25 ~~~~~d~~~ini~d~dg~TpLh~AA~~Gdle~Vk~LLe~~GadvN~~~l~~~~~~~~~~~D~~G~TPLhlAA~~G~~eiV 104 (624)
+..+++..+|..+|+.|+++|..|+-.|+..+|..|+. ..++|+... |+.+.|+|-+||..|+.++|
T Consensus 774 ellv~rganiehrdkkgf~plImaatagh~tvV~~llk-~ha~veaQs------------drtkdt~lSlacsggr~~vv 840 (2131)
T KOG4369|consen 774 ELLVVRGANIEHRDKKGFVPLIMAATAGHITVVQDLLK-AHADVEAQS------------DRTKDTMLSLACSGGRTRVV 840 (2131)
T ss_pred HHHHHhcccccccccccchhhhhhcccCchHHHHHHHh-hhhhhhhhc------------ccccCceEEEecCCCcchHH
Confidence 34456778899999999999999999999999999999 888888764 55566666666666666666
Q ss_pred HHHHHhcCCCccccCCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCCCcC--CCCCcHHHHHhc
Q 006947 105 RLILSESGADVNLSCGNDKSTALHCAASGGALNAVDVVKLLLAAGADPNFVD--AKGHHPVDVIVV 168 (624)
Q Consensus 105 klLL~~~GADVN~~~d~~G~TPLH~Aa~~G~~~~~eiVklLL~~GAD~n~~D--~~G~TPLhlAa~ 168 (624)
++||.. |++-..+ +....|||-+|..+|. +++|++||..|+.||.+. +.|-.||++|..
T Consensus 841 elLl~~-gankehr-nvsDytPlsla~Sggy---~~iI~~llS~GseInSrtgSklgisPLmlatm 901 (2131)
T KOG4369|consen 841 ELLLNA-GANKEHR-NVSDYTPLSLARSGGY---TKIIHALLSSGSEINSRTGSKLGISPLMLATM 901 (2131)
T ss_pred HHHHHh-hcccccc-chhhcCchhhhcCcch---HHHHHHHhhcccccccccccccCcchhhhhhh
Confidence 666655 5655555 5555566666666666 666666666665555543 245556666655
No 88
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.09 E-value=1.8e-10 Score=90.32 Aligned_cols=54 Identities=28% Similarity=0.367 Sum_probs=45.6
Q ss_pred ChHHHHHHHHcCCHHHHHHHHhcCCCCCcccccccccccCCccccCCCCchHHHHHhcCCHHHHHHHH
Q 006947 41 AFASLLELAANNDVEGFKRSIVCDPSGVDEVGLWYGRQKGSKQMVNEQRTPLMVAATYGSIDIIRLIL 108 (624)
Q Consensus 41 g~TpLh~AA~~Gdle~Vk~LLe~~GadvN~~~l~~~~~~~~~~~D~~G~TPLhlAA~~G~~eiVklLL 108 (624)
|.|+||+||..|+.++++.|++ .|.++|.+ |.+|+||||+|+..|+++++++||
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~-~~~din~~-------------d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLE-HGADINAQ-------------DEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHH-TTSGTT-B--------------TTS--HHHHHHHTT-HHHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHH-CCCCCCCC-------------CCCCCCHHHHHHHccCHHHHHHHC
Confidence 6799999999999999999999 79999987 689999999999999999999997
No 89
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.05 E-value=4.5e-10 Score=114.56 Aligned_cols=99 Identities=23% Similarity=0.262 Sum_probs=90.7
Q ss_pred ccCCCCcccCccChHHHHHHHHcCCHHHHHHHHhcCCCCCcccccccccccCCccccCCCCchHHHHHhcCCHHHHHHHH
Q 006947 29 VDMNHLTVETDDAFASLLELAANNDVEGFKRSIVCDPSGVDEVGLWYGRQKGSKQMVNEQRTPLMVAATYGSIDIIRLIL 108 (624)
Q Consensus 29 ~d~~~ini~d~dg~TpLh~AA~~Gdle~Vk~LLe~~GadvN~~~l~~~~~~~~~~~D~~G~TPLhlAA~~G~~eiVklLL 108 (624)
....+++..|..|+++|..|+.+|+++.|++||+ .|+|||... +..+.||||+||..|+.+|.++||
T Consensus 33 s~vr~vn~~D~sGMs~LahAaykGnl~~v~lll~-~gaDvN~~q------------hg~~YTpLmFAALSGn~dvcrlll 99 (396)
T KOG1710|consen 33 STVRQVNQRDPSGMSVLAHAAYKGNLTLVELLLE-LGADVNDKQ------------HGTLYTPLMFAALSGNQDVCRLLL 99 (396)
T ss_pred HHhhhhhccCCCcccHHHHHHhcCcHHHHHHHHH-hCCCcCccc------------ccccccHHHHHHHcCCchHHHHHH
Confidence 3456789999999999999999999999999999 999999763 678899999999999999999999
Q ss_pred HhcCCCccccCCCCCChHHHHHHhCCCCChHHHHHHH
Q 006947 109 SESGADVNLSCGNDKSTALHCAASGGALNAVDVVKLL 145 (624)
Q Consensus 109 ~~~GADVN~~~d~~G~TPLH~Aa~~G~~~~~eiVklL 145 (624)
+. |+..... +.-|+|+-..||.-|+ .++|..+
T Consensus 100 da-Ga~~~~v-NsvgrTAaqmAAFVG~---H~CV~iI 131 (396)
T KOG1710|consen 100 DA-GARMYLV-NSVGRTAAQMAAFVGH---HECVAII 131 (396)
T ss_pred hc-cCccccc-cchhhhHHHHHHHhcc---hHHHHHH
Confidence 99 9999998 8899999999999999 7777655
No 90
>KOG1595 consensus CCCH-type Zn-finger protein [General function prediction only]
Probab=99.04 E-value=7.6e-10 Score=121.17 Aligned_cols=221 Identities=15% Similarity=0.184 Sum_probs=141.4
Q ss_pred cChHHHHHHHHcCCHHHHHHHHhcCCCCCcccccccccccCCccccCCCCchHHHHHh---cCCHHHHHHHHHhcCCCcc
Q 006947 40 DAFASLLELAANNDVEGFKRSIVCDPSGVDEVGLWYGRQKGSKQMVNEQRTPLMVAAT---YGSIDIIRLILSESGADVN 116 (624)
Q Consensus 40 dg~TpLh~AA~~Gdle~Vk~LLe~~GadvN~~~l~~~~~~~~~~~D~~G~TPLhlAA~---~G~~eiVklLL~~~GADVN 116 (624)
+.+|+|.+|+..|.++.+..++..+-.++|... -+|.. |.|+. .|.++++..|+.. ++..+
T Consensus 57 ~qR~~~~v~~~~Gs~~~~~~i~~~~~~e~~~~C-------------~~~~~--~C~~~g~s~~~~e~~~hL~~~-k~~~~ 120 (528)
T KOG1595|consen 57 NQRRRRPVARRDGSFNYSPDIYCTKYDEVTGIC-------------PDGDE--HCAVLGRSVGDTERTYHLRYY-KTLPC 120 (528)
T ss_pred ccccccchhhhcCccccccceeecchhhccccC-------------CCCcc--cchhcccccCCcceeEecccc-ccccC
Confidence 567899999999999999999886666666553 33444 55544 3567777788866 78888
Q ss_pred ccCCCCCChH---HHHHHhCCCCChHHHHHHHHHCCCCCCCcCCCCCcHHHHHhcCCChhhHHHHHHHHHHCCCCCcccc
Q 006947 117 LSCGNDKSTA---LHCAASGGALNAVDVVKLLLAAGADPNFVDAKGHHPVDVIVVPPKFQDVRLTLEELLATDGSVERNL 193 (624)
Q Consensus 117 ~~~d~~G~TP---LH~Aa~~G~~~~~eiVklLL~~GAD~n~~D~~G~TPLhlAa~~g~~~~~~~lLe~LL~~gadv~~~~ 193 (624)
.. |..|.-+ ||+|...+-.+....|+.|++.+.--...|..+......+. . ..-.|..
T Consensus 121 ~t-da~g~~~~~v~~~~~~~~~~~~r~~~~~l~e~~~~~~~~~~e~~~~~~~~~-----------~----~y~~Dp~--- 181 (528)
T KOG1595|consen 121 VT-DARGNCVKNVLHCAFAHGPNDLRPPVEDLLELQGGSGLPDDEPEVESKLDV-----------T----EYPEDPS--- 181 (528)
T ss_pred cc-ccCCCcccCcccccccCCccccccHHHHHHhcccccCccCCCccccccccc-----------c----cccCCCC---
Confidence 76 7666544 67777665533356777777775200001111110000000 0 0000000
Q ss_pred cccccccCCCCChhhhhhhcCCCCCCCCCCCCccccCCCCccccccccCCCCCCCCcc------ccCcccc-------cc
Q 006947 194 RVSTTTSNSNSPPLSPALENGSPTSASGSPMKSMSVDAPSFSVSEKKEYPIDPSLPDI------KNSIYST-------DE 260 (624)
Q Consensus 194 ~l~~a~~~~g~TpL~lA~e~Gs~~~a~~s~~~~~~~~~a~~s~sekkeyp~D~slpdi------knsiYss-------De 260 (624)
+-.+. ++++.++..+|.....-... ....|.+ -+
T Consensus 182 --------------------------------~pdi~-~~ys~DeFrMy~fKir~C~R~~shDwteCPf~HpgEkARRRD 228 (528)
T KOG1595|consen 182 --------------------------------WPDIN-GIYSSDEFRMYSFKIRRCSRPRSHDWTECPFAHPGEKARRRD 228 (528)
T ss_pred --------------------------------ccccc-ccccccceEEEeeeecccCCccCCCcccCCccCCCcccccCC
Confidence 00000 23444555555444332221 1111211 26
Q ss_pred ccccccccccCC---CccCCCCccCCCCCCCcccccCCCCCCcccccCCCCCCCCcCCCCCccccccccceeecCCC
Q 006947 261 FRMYSFKVRPCS---RAYSHDWTECPFVHPGENARRRDPRKFHYSCVPCPDFRKGACRRGDMCEYAHGVFECWLHPA 334 (624)
Q Consensus 261 Frmy~fKt~pC~---r~~sh~w~~Cpf~H~~~~~rRr~p~~~~y~~~~C~~~~~g~C~~gd~C~~aH~~~E~~~hP~ 334 (624)
-|.|+|.-.+|+ ++.|..++.|.|+| |..+.+-+|. .|+|++|++. |.|++ --|.|||...|++.+|.
T Consensus 229 PRkyhYs~tpCPefrkG~C~rGD~CEyaH-gvfEcwLHPa--~YRT~~CkDg--~~C~R-rvCfFAH~~eqLR~l~~ 299 (528)
T KOG1595|consen 229 PRKYHYSSTPCPEFRKGSCERGDSCEYAH-GVFECWLHPA--RYRTRKCKDG--GYCPR-RVCFFAHSPEQLRPLPP 299 (528)
T ss_pred cccccccCccCcccccCCCCCCCcccccc-ceehhhcCHH--HhccccccCC--CCCcc-ceEeeecChHHhcccCC
Confidence 789999999998 67899999999999 9999999999 9999999988 77999 79999999999998873
No 91
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.01 E-value=5.8e-10 Score=120.95 Aligned_cols=90 Identities=28% Similarity=0.399 Sum_probs=81.1
Q ss_pred HHHHHhcCCHHHHHHHHHhcCCCccccCCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCCCcCCCCCcHHHHHhcCCC
Q 006947 92 LMVAATYGSIDIIRLILSESGADVNLSCGNDKSTALHCAASGGALNAVDVVKLLLAAGADPNFVDAKGHHPVDVIVVPPK 171 (624)
Q Consensus 92 LhlAA~~G~~eiVklLL~~~GADVN~~~d~~G~TPLH~Aa~~G~~~~~eiVklLL~~GAD~n~~D~~G~TPLhlAa~~g~ 171 (624)
|.-|+..|-+|+|+-++.+ --|+... +..|.||||-|+..|| .+||++||+.|+|+|+.|.+||||||+|+.
T Consensus 554 LLDaaLeGEldlVq~~i~e-v~DpSqp-NdEGITaLHNAiCagh---yeIVkFLi~~ganVNa~DSdGWTPLHCAAS--- 625 (752)
T KOG0515|consen 554 LLDAALEGELDLVQRIIYE-VTDPSQP-NDEGITALHNAICAGH---YEIVKFLIEFGANVNAADSDGWTPLHCAAS--- 625 (752)
T ss_pred HHhhhhcchHHHHHHHHHh-hcCCCCC-CccchhHHhhhhhcch---hHHHHHHHhcCCcccCccCCCCchhhhhhh---
Confidence 4558999999999999987 5788777 8899999999999999 999999999999999999999999999998
Q ss_pred hhhHHHHHHHHHHCCCCCc
Q 006947 172 FQDVRLTLEELLATDGSVE 190 (624)
Q Consensus 172 ~~~~~~lLe~LL~~gadv~ 190 (624)
-....+++.|++.|+.+.
T Consensus 626 -CNnv~~ckqLVe~Gaavf 643 (752)
T KOG0515|consen 626 -CNNVPMCKQLVESGAAVF 643 (752)
T ss_pred -cCchHHHHHHHhccceEE
Confidence 455668888999998887
No 92
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=98.89 E-value=2.1e-09 Score=115.56 Aligned_cols=98 Identities=23% Similarity=0.280 Sum_probs=86.9
Q ss_pred CcccCccChHHHHHHHHcCCHHHHHHHHhcCCCCCcccccccccccCCccccCCCCchHHHHHhcCCHHHHHHHHHhcCC
Q 006947 34 LTVETDDAFASLLELAANNDVEGFKRSIVCDPSGVDEVGLWYGRQKGSKQMVNEQRTPLMVAATYGSIDIIRLILSESGA 113 (624)
Q Consensus 34 ini~d~dg~TpLh~AA~~Gdle~Vk~LLe~~GadvN~~~l~~~~~~~~~~~D~~G~TPLhlAA~~G~~eiVklLL~~~GA 113 (624)
.-.++.++...+++||..||+..++.+.- .|.|++.. |.+.+|+||+||..|++++|++||+.+++
T Consensus 499 ~~~~~~~~~i~~~~aa~~GD~~alrRf~l-~g~D~~~~-------------DyD~RTaLHvAAaEG~v~v~kfl~~~~kv 564 (622)
T KOG0506|consen 499 GGPRENDTVINVMYAAKNGDLSALRRFAL-QGMDLETK-------------DYDDRTALHVAAAEGHVEVVKFLLNACKV 564 (622)
T ss_pred cCcccccchhhhhhhhhcCCHHHHHHHHH-hccccccc-------------ccccchhheeecccCceeHHHHHHHHHcC
Confidence 33556677888999999999999999988 88888877 78999999999999999999999999899
Q ss_pred CccccCCCCCChHHHHHHhCCCCChHHHHHHHHHCC
Q 006947 114 DVNLSCGNDKSTALHCAASGGALNAVDVVKLLLAAG 149 (624)
Q Consensus 114 DVN~~~d~~G~TPLH~Aa~~G~~~~~eiVklLL~~G 149 (624)
|++.+ |.+|+|||.-|...+| .+++++|-++-
T Consensus 565 ~~~~k-DRw~rtPlDdA~~F~h---~~v~k~L~~~~ 596 (622)
T KOG0506|consen 565 DPDPK-DRWGRTPLDDAKHFKH---KEVVKLLEEAQ 596 (622)
T ss_pred CCChh-hccCCCcchHhHhcCc---HHHHHHHHHHh
Confidence 99988 9999999999999999 99999998763
No 93
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=98.75 E-value=2.8e-08 Score=107.44 Aligned_cols=95 Identities=27% Similarity=0.306 Sum_probs=84.3
Q ss_pred ccCCCCch------HHHHHhcCCHHHHHHHHHhcCCCccccCCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCCCcCC
Q 006947 84 MVNEQRTP------LMVAATYGSIDIIRLILSESGADVNLSCGNDKSTALHCAASGGALNAVDVVKLLLAAGADPNFVDA 157 (624)
Q Consensus 84 ~D~~G~TP------LhlAA~~G~~eiVklLL~~~GADVN~~~d~~G~TPLH~Aa~~G~~~~~eiVklLL~~GAD~n~~D~ 157 (624)
+|.+|.|. ||-.++.|++++.--||.. ||++|......|.||||.|++.|+ .--+++|+-+|||+++.|.
T Consensus 123 rDdD~~~~~~LsrQLhasvRt~nlet~LRll~l-GA~~N~~hpekg~TpLHvAAk~Gq---~~Q~ElL~vYGAD~~a~d~ 198 (669)
T KOG0818|consen 123 RDDDSVTAKDLSKQLHSSVRTGNLETCLRLLSL-GAQANFFHPEKGNTPLHVAAKAGQ---ILQAELLAVYGADPGAQDS 198 (669)
T ss_pred CCcchhhHHHHHHHHHHHhhcccHHHHHHHHHc-ccccCCCCcccCCchhHHHHhccc---hhhhhHHhhccCCCCCCCC
Confidence 46666665 8999999999999888888 999999856779999999999999 8899999999999999999
Q ss_pred CCCcHHHHHhcCCChhhHHHHHHHH
Q 006947 158 KGHHPVDVIVVPPKFQDVRLTLEEL 182 (624)
Q Consensus 158 ~G~TPLhlAa~~g~~~~~~~lLe~L 182 (624)
+|+||+.+|-..||......++++.
T Consensus 199 ~GmtP~~~AR~~gH~~laeRl~e~~ 223 (669)
T KOG0818|consen 199 SGMTPVDYARQGGHHELAERLVEIQ 223 (669)
T ss_pred CCCcHHHHHHhcCchHHHHHHHHHH
Confidence 9999999999988887777777644
No 94
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=98.69 E-value=1.1e-08 Score=115.88 Aligned_cols=83 Identities=28% Similarity=0.346 Sum_probs=78.0
Q ss_pred ccccCCCCchHHHHHhcCCHHHHHHHHHhcCCCccccCCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCCCcCCCCCc
Q 006947 82 KQMVNEQRTPLMVAATYGSIDIIRLILSESGADVNLSCGNDKSTALHCAASGGALNAVDVVKLLLAAGADPNFVDAKGHH 161 (624)
Q Consensus 82 ~~~D~~G~TPLhlAA~~G~~eiVklLL~~~GADVN~~~d~~G~TPLH~Aa~~G~~~~~eiVklLL~~GAD~n~~D~~G~T 161 (624)
+..|..|+|+||+|+..|..+++++||++ |+|++.+.-..|+||||.|...|+ +|++-+||.+|+...++|++|..
T Consensus 46 nikD~~GR~alH~~~S~~k~~~l~wLlqh-Gidv~vqD~ESG~taLHRaiyyG~---idca~lLL~~g~SL~i~Dkegls 121 (1267)
T KOG0783|consen 46 NIKDRYGRTALHIAVSENKNSFLRWLLQH-GIDVFVQDEESGYTALHRAIYYGN---IDCASLLLSKGRSLRIKDKEGLS 121 (1267)
T ss_pred hHHHhhccceeeeeeccchhHHHHHHHhc-CceeeeccccccchHhhHhhhhch---HHHHHHHHhcCCceEEecccCCC
Confidence 34589999999999999999999999999 999999955579999999999999 99999999999999999999999
Q ss_pred HHHHHhc
Q 006947 162 PVDVIVV 168 (624)
Q Consensus 162 PLhlAa~ 168 (624)
||...++
T Consensus 122 plq~~~r 128 (1267)
T KOG0783|consen 122 PLQFLSR 128 (1267)
T ss_pred HHHHHhh
Confidence 9999887
No 95
>COG5063 CTH1 CCCH-type Zn-finger protein [General function prediction only]
Probab=98.54 E-value=3.7e-08 Score=101.10 Aligned_cols=71 Identities=31% Similarity=0.580 Sum_probs=62.0
Q ss_pred CCcccc--cCCCCC-CCCcCCC---CCccccc---cccceeecC--CCccccccccCC---CCCCCC-ccCCCCCCCCcc
Q 006947 298 KFHYSC--VPCPDF-RKGACRR---GDMCEYA---HGVFECWLH--PAQYRTRLCKDG---TSCARR-VCFFAHTPEELR 362 (624)
Q Consensus 298 ~~~y~~--~~C~~~-~~g~C~~---gd~C~~a---H~~~E~~~h--P~~ykT~~C~~~---~~C~~~-~C~FaH~~~elr 362 (624)
+--|++ ++|..| ++|.|++ |++|+|| ||.-|+... -..|||+.|.+| |+|+|+ .|.|+|+.+++.
T Consensus 223 ~~L~kt~~~lc~~ft~kg~~p~~~sG~~~q~a~~~HGlN~l~~k~k~~~frTePcinwe~sGyc~yg~Rc~F~hgd~~~i 302 (351)
T COG5063 223 KPLYKTNPELCESFTRKGTCPYWISGVKCQFACRGHGLNELKSKKKKQNFRTEPCINWEKSGYCPYGLRCCFKHGDDSDI 302 (351)
T ss_pred chhhcCCHHHhhccCcCCCCccccccccccccccccccccccccccccccccCCccchhhcccCccccccccccCChhhc
Confidence 457888 999999 7899999 9999999 998887654 457999999988 999997 599999999999
Q ss_pred CcccCC
Q 006947 363 PLYVST 368 (624)
Q Consensus 363 ~~~~~~ 368 (624)
-+|.-+
T Consensus 303 e~~~~~ 308 (351)
T COG5063 303 EMYEEA 308 (351)
T ss_pred cccccc
Confidence 888543
No 96
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=98.48 E-value=4.7e-07 Score=98.18 Aligned_cols=96 Identities=24% Similarity=0.271 Sum_probs=84.8
Q ss_pred CcccCccChH------HHHHHHHcCCHHHHHHHHhcCCCCCcccccccccccCCccccCCCCchHHHHHhcCCHHHHHHH
Q 006947 34 LTVETDDAFA------SLLELAANNDVEGFKRSIVCDPSGVDEVGLWYGRQKGSKQMVNEQRTPLMVAATYGSIDIIRLI 107 (624)
Q Consensus 34 ini~d~dg~T------pLh~AA~~Gdle~Vk~LLe~~GadvN~~~l~~~~~~~~~~~D~~G~TPLhlAA~~G~~eiVklL 107 (624)
...+|+||.+ -||-.+..|++++.-.||. -|+++|... -..|.||||+||..|+.--+++|
T Consensus 120 ~~~rDdD~~~~~~LsrQLhasvRt~nlet~LRll~-lGA~~N~~h------------pekg~TpLHvAAk~Gq~~Q~ElL 186 (669)
T KOG0818|consen 120 LPCRDDDSVTAKDLSKQLHSSVRTGNLETCLRLLS-LGAQANFFH------------PEKGNTPLHVAAKAGQILQAELL 186 (669)
T ss_pred CCCCCcchhhHHHHHHHHHHHhhcccHHHHHHHHH-cccccCCCC------------cccCCchhHHHHhccchhhhhHH
Confidence 4456677665 4999999999999999999 999999875 57899999999999999999999
Q ss_pred HHhcCCCccccCCCCCChHHHHHHhCCCCChHHHHHHHHH
Q 006947 108 LSESGADVNLSCGNDKSTALHCAASGGALNAVDVVKLLLA 147 (624)
Q Consensus 108 L~~~GADVN~~~d~~G~TPLH~Aa~~G~~~~~eiVklLL~ 147 (624)
+-. |||++.. |..|.||+.+|-.+|| .++.+.|++
T Consensus 187 ~vY-GAD~~a~-d~~GmtP~~~AR~~gH---~~laeRl~e 221 (669)
T KOG0818|consen 187 AVY-GADPGAQ-DSSGMTPVDYARQGGH---HELAERLVE 221 (669)
T ss_pred hhc-cCCCCCC-CCCCCcHHHHHHhcCc---hHHHHHHHH
Confidence 977 9999999 9999999999999999 888777775
No 97
>PF13606 Ank_3: Ankyrin repeat
Probab=98.44 E-value=2e-07 Score=64.80 Aligned_cols=29 Identities=48% Similarity=0.827 Sum_probs=19.2
Q ss_pred CCCchHHHHHhcCCHHHHHHHHHhcCCCcc
Q 006947 87 EQRTPLMVAATYGSIDIIRLILSESGADVN 116 (624)
Q Consensus 87 ~G~TPLhlAA~~G~~eiVklLL~~~GADVN 116 (624)
+|+||||+||..|+.++|++||++ |+|||
T Consensus 1 ~G~T~Lh~A~~~g~~e~v~~Ll~~-gadvn 29 (30)
T PF13606_consen 1 NGNTPLHLAASNGNIEIVKYLLEH-GADVN 29 (30)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHc-CCCCC
Confidence 356666666666666666666666 66665
No 98
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.40 E-value=6.7e-07 Score=98.53 Aligned_cols=60 Identities=30% Similarity=0.442 Sum_probs=29.1
Q ss_pred CCCCchHHHHHhcCCHHHHHHHHHhcCCCccccCCCCCChHHHHHHhCCCCChHHHHHHHHHCCC
Q 006947 86 NEQRTPLMVAATYGSIDIIRLILSESGADVNLSCGNDKSTALHCAASGGALNAVDVVKLLLAAGA 150 (624)
Q Consensus 86 ~~G~TPLhlAA~~G~~eiVklLL~~~GADVN~~~d~~G~TPLH~Aa~~G~~~~~eiVklLL~~GA 150 (624)
.+|+|+||+||..|++.+.++||-+ |+|+-.+ |..|+|+|.||-..|. .||+.+||.+|.
T Consensus 659 ~~grt~LHLa~~~gnVvl~QLLiWy-g~dv~~r-da~g~t~l~yar~a~s---qec~d~llq~gc 718 (749)
T KOG0705|consen 659 GDGRTALHLAARKGNVVLAQLLIWY-GVDVMAR-DAHGRTALFYARQAGS---QECIDVLLQYGC 718 (749)
T ss_pred CCCcchhhhhhhhcchhHHHHHHHh-Cccceec-ccCCchhhhhHhhccc---HHHHHHHHHcCC
Confidence 3444555555555555444444433 4554444 4445555555544444 445555554443
No 99
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=98.39 E-value=3.2e-07 Score=99.09 Aligned_cols=89 Identities=35% Similarity=0.437 Sum_probs=77.9
Q ss_pred cCCCCchHHHHHhcCCHHHHHHHHHhcCCCccccCCCCCChHHHHHHhCCCCChHHHHHHHHHC-CCCCCCcCCCCCcHH
Q 006947 85 VNEQRTPLMVAATYGSIDIIRLILSESGADVNLSCGNDKSTALHCAASGGALNAVDVVKLLLAA-GADPNFVDAKGHHPV 163 (624)
Q Consensus 85 D~~G~TPLhlAA~~G~~eiVklLL~~~GADVN~~~d~~G~TPLH~Aa~~G~~~~~eiVklLL~~-GAD~n~~D~~G~TPL 163 (624)
+.++.-.+++||..|.+..++-+.-. |.|++.+ |.+.+|+||.||..|+ +++|++||+. +.|++.+|..|+|||
T Consensus 503 ~~~~~i~~~~aa~~GD~~alrRf~l~-g~D~~~~-DyD~RTaLHvAAaEG~---v~v~kfl~~~~kv~~~~kDRw~rtPl 577 (622)
T KOG0506|consen 503 ENDTVINVMYAAKNGDLSALRRFALQ-GMDLETK-DYDDRTALHVAAAEGH---VEVVKFLLNACKVDPDPKDRWGRTPL 577 (622)
T ss_pred cccchhhhhhhhhcCCHHHHHHHHHh-ccccccc-ccccchhheeecccCc---eeHHHHHHHHHcCCCChhhccCCCcc
Confidence 45667789999999999999877656 8999999 9999999999999999 9999999988 899999999999999
Q ss_pred HHHhcCCChhhHHHH
Q 006947 164 DVIVVPPKFQDVRLT 178 (624)
Q Consensus 164 hlAa~~g~~~~~~~l 178 (624)
+-|...+|.+.++.+
T Consensus 578 DdA~~F~h~~v~k~L 592 (622)
T KOG0506|consen 578 DDAKHFKHKEVVKLL 592 (622)
T ss_pred hHhHhcCcHHHHHHH
Confidence 999985554444333
No 100
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=98.36 E-value=1.8e-06 Score=94.73 Aligned_cols=109 Identities=23% Similarity=0.301 Sum_probs=92.2
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCcccccccccccCCccccCCCCchHHHHHhcCCHHHHHHHHHhcCCC-ccccCCCCC
Q 006947 45 LLELAANNDVEGFKRSIVCDPSGVDEVGLWYGRQKGSKQMVNEQRTPLMVAATYGSIDIIRLILSESGAD-VNLSCGNDK 123 (624)
Q Consensus 45 Lh~AA~~Gdle~Vk~LLe~~GadvN~~~l~~~~~~~~~~~D~~G~TPLhlAA~~G~~eiVklLL~~~GAD-VN~~~d~~G 123 (624)
|+.|+..+|+-.++.+-. .|.++-.+ +.+.+|.||+|+..|+-+||+|||+++... .+.. +..|
T Consensus 870 il~av~~~D~~klqE~h~-~gg~ll~~-------------~~~~~sllh~a~~tg~~eivkyildh~p~elld~~-de~g 934 (1004)
T KOG0782|consen 870 ILRAVLSSDLMKLQETHL-NGGSLLIQ-------------GPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMA-DETG 934 (1004)
T ss_pred HHHHHHhccHHHHHHHHh-cCCceEee-------------CcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHH-hhhh
Confidence 889999999877777766 56555544 578899999999999999999999994333 3444 7889
Q ss_pred ChHHHHHHhCCCCChHHHHHHHHHCCCCCCCcCCCCCcHHHHHhcCCC
Q 006947 124 STALHCAASGGALNAVDVVKLLLAAGADPNFVDAKGHHPVDVIVVPPK 171 (624)
Q Consensus 124 ~TPLH~Aa~~G~~~~~eiVklLL~~GAD~n~~D~~G~TPLhlAa~~g~ 171 (624)
.|+||-|+..++ ..++.+|+++||....+|..|.||-.-|-..|+
T Consensus 935 et~lhkaa~~~~---r~vc~~lvdagasl~ktd~kg~tp~eraqqa~d 979 (1004)
T KOG0782|consen 935 ETALHKAACQRN---RAVCQLLVDAGASLRKTDSKGKTPQERAQQAGD 979 (1004)
T ss_pred hHHHHHHHHhcc---hHHHHHHHhcchhheecccCCCChHHHHHhcCC
Confidence 999999999998 899999999999999999999999998887443
No 101
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.36 E-value=5.5e-07 Score=63.53 Aligned_cols=30 Identities=47% Similarity=0.698 Sum_probs=16.5
Q ss_pred CCchHHHHHhcCCHHHHHHHHHhcCCCcccc
Q 006947 88 QRTPLMVAATYGSIDIIRLILSESGADVNLS 118 (624)
Q Consensus 88 G~TPLhlAA~~G~~eiVklLL~~~GADVN~~ 118 (624)
|+||||+||..|+.++|++||++ |++++.+
T Consensus 2 G~TpLh~A~~~~~~~~v~~Ll~~-ga~~~~~ 31 (33)
T PF00023_consen 2 GNTPLHYAAQRGHPDIVKLLLKH-GADINAR 31 (33)
T ss_dssp SBBHHHHHHHTTCHHHHHHHHHT-TSCTTCB
T ss_pred cccHHHHHHHHHHHHHHHHHHHC-cCCCCCC
Confidence 55555555555555555555554 5555544
No 102
>PF13606 Ank_3: Ankyrin repeat
Probab=98.35 E-value=4.8e-07 Score=62.92 Aligned_cols=30 Identities=50% Similarity=0.701 Sum_probs=28.3
Q ss_pred CCChHHHHHHhCCCCChHHHHHHHHHCCCCCCC
Q 006947 122 DKSTALHCAASGGALNAVDVVKLLLAAGADPNF 154 (624)
Q Consensus 122 ~G~TPLH~Aa~~G~~~~~eiVklLL~~GAD~n~ 154 (624)
+|+||||+||..|+ .|+|++||++|+|+|.
T Consensus 1 ~G~T~Lh~A~~~g~---~e~v~~Ll~~gadvn~ 30 (30)
T PF13606_consen 1 NGNTPLHLAASNGN---IEIVKYLLEHGADVNA 30 (30)
T ss_pred CCCCHHHHHHHhCC---HHHHHHHHHcCCCCCC
Confidence 58999999999999 9999999999999984
No 103
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.34 E-value=5.8e-07 Score=63.44 Aligned_cols=33 Identities=55% Similarity=0.657 Sum_probs=31.3
Q ss_pred CCChHHHHHHhCCCCChHHHHHHHHHCCCCCCCcCC
Q 006947 122 DKSTALHCAASGGALNAVDVVKLLLAAGADPNFVDA 157 (624)
Q Consensus 122 ~G~TPLH~Aa~~G~~~~~eiVklLL~~GAD~n~~D~ 157 (624)
+|.||||+|+..|+ .++|++||++|++++.+|+
T Consensus 1 dG~TpLh~A~~~~~---~~~v~~Ll~~ga~~~~~d~ 33 (33)
T PF00023_consen 1 DGNTPLHYAAQRGH---PDIVKLLLKHGADINARDN 33 (33)
T ss_dssp TSBBHHHHHHHTTC---HHHHHHHHHTTSCTTCBCT
T ss_pred CcccHHHHHHHHHH---HHHHHHHHHCcCCCCCCCC
Confidence 58999999999999 9999999999999999874
No 104
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.21 E-value=2.8e-06 Score=93.29 Aligned_cols=90 Identities=26% Similarity=0.315 Sum_probs=74.0
Q ss_pred chHHHHHhcCCHHHHHH-HHHhcCCCccccCCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCCCcCCCCCcHHHHHhc
Q 006947 90 TPLMVAATYGSIDIIRL-ILSESGADVNLSCGNDKSTALHCAASGGALNAVDVVKLLLAAGADPNFVDAKGHHPVDVIVV 168 (624)
Q Consensus 90 TPLhlAA~~G~~eiVkl-LL~~~GADVN~~~d~~G~TPLH~Aa~~G~~~~~eiVklLL~~GAD~n~~D~~G~TPLhlAa~ 168 (624)
-|||+++.....+-+.. |+...+..|+.+ |..|.||||+|+.-|+ .+.+++|+.+|||+..+|++|++|||.|+.
T Consensus 22 ~~lh~~~~~~~~~sl~~el~~~~~~~id~~-D~~g~TpLhlAV~Lg~---~~~a~~Ll~a~Adv~~kN~~gWs~L~EAv~ 97 (560)
T KOG0522|consen 22 KPLHWAVVTTDSDSLEQELLAKVSLVIDRR-DPPGRTPLHLAVRLGH---VEAARILLSAGADVSIKNNEGWSPLHEAVS 97 (560)
T ss_pred cccchhhhccchhhHHHHHhhhhhceeccc-cCCCCccHHHHHHhcC---HHHHHHHHhcCCCccccccccccHHHHHHH
Confidence 45999998877665544 433346678888 9999999999999999 999999999999999999999999999999
Q ss_pred CCChhhHHHHHHHHH
Q 006947 169 PPKFQDVRLTLEELL 183 (624)
Q Consensus 169 ~g~~~~~~~lLe~LL 183 (624)
.|+...+..++..+-
T Consensus 98 ~g~~q~i~~vlr~~~ 112 (560)
T KOG0522|consen 98 TGNEQIITEVLRHLK 112 (560)
T ss_pred cCCHHHHHHHHHHhH
Confidence 777666666655443
No 105
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=98.21 E-value=6.9e-07 Score=101.66 Aligned_cols=86 Identities=19% Similarity=0.185 Sum_probs=80.4
Q ss_pred CCCcccCccChHHHHHHHHcCCHHHHHHHHhcCCCCCcccccccccccCCccccCCCCchHHHHHhcCCHHHHHHHHHhc
Q 006947 32 NHLTVETDDAFASLLELAANNDVEGFKRSIVCDPSGVDEVGLWYGRQKGSKQMVNEQRTPLMVAATYGSIDIIRLILSES 111 (624)
Q Consensus 32 ~~ini~d~dg~TpLh~AA~~Gdle~Vk~LLe~~GadvN~~~l~~~~~~~~~~~D~~G~TPLhlAA~~G~~eiVklLL~~~ 111 (624)
+-.|++|.-|+++||.++..|..+++++||. +|+|++.++ ...|+||||-|..+|++|++-+||.+
T Consensus 43 n~anikD~~GR~alH~~~S~~k~~~l~wLlq-hGidv~vqD------------~ESG~taLHRaiyyG~idca~lLL~~- 108 (1267)
T KOG0783|consen 43 NLANIKDRYGRTALHIAVSENKNSFLRWLLQ-HGIDVFVQD------------EESGYTALHRAIYYGNIDCASLLLSK- 108 (1267)
T ss_pred hhhhHHHhhccceeeeeeccchhHHHHHHHh-cCceeeecc------------ccccchHhhHhhhhchHHHHHHHHhc-
Confidence 4478999999999999999999999999999 899999986 57799999999999999999999998
Q ss_pred CCCccccCCCCCChHHHHHHh
Q 006947 112 GADVNLSCGNDKSTALHCAAS 132 (624)
Q Consensus 112 GADVN~~~d~~G~TPLH~Aa~ 132 (624)
|+...++ |++|..||..-++
T Consensus 109 g~SL~i~-Dkeglsplq~~~r 128 (1267)
T KOG0783|consen 109 GRSLRIK-DKEGLSPLQFLSR 128 (1267)
T ss_pred CCceEEe-cccCCCHHHHHhh
Confidence 9999999 9999999998877
No 106
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.19 E-value=4.7e-06 Score=92.05 Aligned_cols=91 Identities=30% Similarity=0.354 Sum_probs=78.6
Q ss_pred HHHHHhcCCHHHHHHHHHhcCC--CccccC-CCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCCCcCCCCCcHHHHHhc
Q 006947 92 LMVAATYGSIDIIRLILSESGA--DVNLSC-GNDKSTALHCAASGGALNAVDVVKLLLAAGADPNFVDAKGHHPVDVIVV 168 (624)
Q Consensus 92 LhlAA~~G~~eiVklLL~~~GA--DVN~~~-d~~G~TPLH~Aa~~G~~~~~eiVklLL~~GAD~n~~D~~G~TPLhlAa~ 168 (624)
|.-|+....+..+-+||.+ |. .+|-.| +.+|+|+||+||..|+ +.+.++|+=+|+|+.++|.+|+|+|.+|-.
T Consensus 628 Ll~A~~~~Dl~t~~lLLAh-g~~~e~~~t~~~~~grt~LHLa~~~gn---Vvl~QLLiWyg~dv~~rda~g~t~l~yar~ 703 (749)
T KOG0705|consen 628 LLRAVAAEDLQTAILLLAH-GSREEVNETCGEGDGRTALHLAARKGN---VVLAQLLIWYGVDVMARDAHGRTALFYARQ 703 (749)
T ss_pred HHHHHHHHHHHHHHHHHhc-cCchhhhccccCCCCcchhhhhhhhcc---hhHHHHHHHhCccceecccCCchhhhhHhh
Confidence 5667777888889999988 54 455444 4567999999999999 999999999999999999999999999998
Q ss_pred CCChhhHHHHHHHHHHCCCCCc
Q 006947 169 PPKFQDVRLTLEELLATDGSVE 190 (624)
Q Consensus 169 ~g~~~~~~~lLe~LL~~gadv~ 190 (624)
.+.++++.+|+++|....
T Consensus 704 ----a~sqec~d~llq~gcp~e 721 (749)
T KOG0705|consen 704 ----AGSQECIDVLLQYGCPDE 721 (749)
T ss_pred ----cccHHHHHHHHHcCCCcc
Confidence 778899999999997665
No 107
>COG5063 CTH1 CCCH-type Zn-finger protein [General function prediction only]
Probab=98.12 E-value=2.3e-06 Score=88.11 Aligned_cols=101 Identities=21% Similarity=0.391 Sum_probs=77.8
Q ss_pred ccccccccc--ccCC----CccCCC---CccCCCC---CCCcccccCCCCCCcccccCCCCCCC-CcCCCCCcccccccc
Q 006947 260 EFRMYSFKV--RPCS----RAYSHD---WTECPFV---HPGENARRRDPRKFHYSCVPCPDFRK-GACRRGDMCEYAHGV 326 (624)
Q Consensus 260 eFrmy~fKt--~pC~----r~~sh~---w~~Cpf~---H~~~~~rRr~p~~~~y~~~~C~~~~~-g~C~~gd~C~~aH~~ 326 (624)
+-.+-.|++ +.|. ++.|.. +..|.|+ | |-+.-.-.-.+..|+|++|.++++ |.|+||.+|+|+||-
T Consensus 220 e~n~~L~kt~~~lc~~ft~kg~~p~~~sG~~~q~a~~~H-GlN~l~~k~k~~~frTePcinwe~sGyc~yg~Rc~F~hgd 298 (351)
T COG5063 220 EQNKPLYKTNPELCESFTRKGTCPYWISGVKCQFACRGH-GLNELKSKKKKQNFRTEPCINWEKSGYCPYGLRCCFKHGD 298 (351)
T ss_pred hccchhhcCCHHHhhccCcCCCCcccccccccccccccc-ccccccccccccccccCCccchhhcccCccccccccccCC
Confidence 344445555 6664 456666 7789999 9 877777667778999999999965 999999999999998
Q ss_pred cee---ecCC-CccccccccCC---CCCCCC-ccCCCCCCCCc
Q 006947 327 FEC---WLHP-AQYRTRLCKDG---TSCARR-VCFFAHTPEEL 361 (624)
Q Consensus 327 ~E~---~~hP-~~ykT~~C~~~---~~C~~~-~C~FaH~~~el 361 (624)
.|. ..|+ ..|+...|+.+ |.|+++ .|-|.|.+.-+
T Consensus 299 ~~~ie~~~~~~~~y~~~~crt~~~~g~~p~g~~~c~~~dkkn~ 341 (351)
T COG5063 299 DSDIEMYEEASLGYLDGPCRTRAKGGAFPSGGAVCKSFDKKNL 341 (351)
T ss_pred hhhccccccccccccccccccccccCccCCCCchhhccccchh
Confidence 664 3465 47999999865 889995 57688876554
No 108
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=98.10 E-value=1.1e-05 Score=93.17 Aligned_cols=132 Identities=17% Similarity=0.157 Sum_probs=104.1
Q ss_pred CcccCccChHHHHHHHHcCCHHHHHHHHhcCCCCCcccccccccccCCccccCCCCchHHHHHhcCCHHHHHHHHHhcCC
Q 006947 34 LTVETDDAFASLLELAANNDVEGFKRSIVCDPSGVDEVGLWYGRQKGSKQMVNEQRTPLMVAATYGSIDIIRLILSESGA 113 (624)
Q Consensus 34 ini~d~dg~TpLh~AA~~Gdle~Vk~LLe~~GadvN~~~l~~~~~~~~~~~D~~G~TPLhlAA~~G~~eiVklLL~~~GA 113 (624)
.......+....+.|+..||...|++.+++... . ..+++.+|.-|+++|++|..+.+.+++++|+++ +.
T Consensus 18 ~~~~l~~~e~~fL~a~E~gd~~~V~k~l~~~~~--~--------~lninc~d~lGr~al~iai~nenle~~eLLl~~-~~ 86 (822)
T KOG3609|consen 18 VDADLNEGEKGFLLAHENGDVPLVAKALEYKAV--S--------KLNINCRDPLGRLALHIAIDNENLELQELLLDT-SS 86 (822)
T ss_pred cccccchhhHHHHHHHHcCChHHHHHHHHhccc--c--------ccchhccChHhhhceecccccccHHHHHHHhcC-cc
Confidence 444555677789999999999999999995544 1 122345589999999999999999999999987 44
Q ss_pred CccccCCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCC----------CCcCCCCCcHHHHHhcCCChhhHHHHHHHHH
Q 006947 114 DVNLSCGNDKSTALHCAASGGALNAVDVVKLLLAAGADP----------NFVDAKGHHPVDVIVVPPKFQDVRLTLEELL 183 (624)
Q Consensus 114 DVN~~~d~~G~TPLH~Aa~~G~~~~~eiVklLL~~GAD~----------n~~D~~G~TPLhlAa~~g~~~~~~~lLe~LL 183 (624)
.+ .-||.+|+..|. +++|+++|.+-.+. ...-..+.|||.+||. ....+|+++|+
T Consensus 87 ~~--------gdALL~aI~~~~---v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh----~NnyEil~~Ll 151 (822)
T KOG3609|consen 87 EE--------GDALLLAIAVGS---VPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAH----LNNFEILQCLL 151 (822)
T ss_pred cc--------chHHHHHHHHHH---HHHHHHHHhcccccchhccccccCcccCCCCccHHHHHHH----hcchHHHHHHH
Confidence 44 248999999999 99999999873332 1233467899999998 56678999999
Q ss_pred HCCCCCcc
Q 006947 184 ATDGSVER 191 (624)
Q Consensus 184 ~~gadv~~ 191 (624)
++|+.+..
T Consensus 152 ~kg~~i~~ 159 (822)
T KOG3609|consen 152 TRGHCIPI 159 (822)
T ss_pred HcCCCCCC
Confidence 99998873
No 109
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.06 E-value=8e-06 Score=89.85 Aligned_cols=88 Identities=26% Similarity=0.413 Sum_probs=73.3
Q ss_pred HHHHHHHHcCCHHHHHHHHhcC-CCCCcccccccccccCCccccCCCCchHHHHHhcCCHHHHHHHHHhcCCCccccCCC
Q 006947 43 ASLLELAANNDVEGFKRSIVCD-PSGVDEVGLWYGRQKGSKQMVNEQRTPLMVAATYGSIDIIRLILSESGADVNLSCGN 121 (624)
Q Consensus 43 TpLh~AA~~Gdle~Vk~LLe~~-GadvN~~~l~~~~~~~~~~~D~~G~TPLhlAA~~G~~eiVklLL~~~GADVN~~~d~ 121 (624)
-+||.++...+.+.+..++... ...|+.. |..|+||||+|+..|+.+.++.||.. |||+-.+ ++
T Consensus 22 ~~lh~~~~~~~~~sl~~el~~~~~~~id~~-------------D~~g~TpLhlAV~Lg~~~~a~~Ll~a-~Adv~~k-N~ 86 (560)
T KOG0522|consen 22 KPLHWAVVTTDSDSLEQELLAKVSLVIDRR-------------DPPGRTPLHLAVRLGHVEAARILLSA-GADVSIK-NN 86 (560)
T ss_pred cccchhhhccchhhHHHHHhhhhhceeccc-------------cCCCCccHHHHHHhcCHHHHHHHHhc-CCCcccc-cc
Confidence 5699999999998888766522 2334443 78999999999999999999999998 9999999 99
Q ss_pred CCChHHHHHHhCCCCChHHHHHHHHHC
Q 006947 122 DKSTALHCAASGGALNAVDVVKLLLAA 148 (624)
Q Consensus 122 ~G~TPLH~Aa~~G~~~~~eiVklLL~~ 148 (624)
.||++||.|+..|+ .+++..+|.+
T Consensus 87 ~gWs~L~EAv~~g~---~q~i~~vlr~ 110 (560)
T KOG0522|consen 87 EGWSPLHEAVSTGN---EQIITEVLRH 110 (560)
T ss_pred ccccHHHHHHHcCC---HHHHHHHHHH
Confidence 99999999999999 7666655543
No 110
>KOG1677 consensus CCCH-type Zn-finger protein [General function prediction only]
Probab=97.94 E-value=5.7e-06 Score=88.36 Aligned_cols=67 Identities=25% Similarity=0.494 Sum_probs=51.8
Q ss_pred cccccccCC----CccCCC-CccCCCCCCCccccc------CCCCCCcccccCCCCCC-CCcCCCCCccccccccceeec
Q 006947 264 YSFKVRPCS----RAYSHD-WTECPFVHPGENARR------RDPRKFHYSCVPCPDFR-KGACRRGDMCEYAHGVFECWL 331 (624)
Q Consensus 264 y~fKt~pC~----r~~sh~-w~~Cpf~H~~~~~rR------r~p~~~~y~~~~C~~~~-~g~C~~gd~C~~aH~~~E~~~ 331 (624)
-.|++..|. .+.|-. ...|-|.|. .+..| .--.-.+|||++|++|. .|.|+||..|.|+|+..|...
T Consensus 128 ~~~kt~lc~~~~~~g~c~y~ge~crfah~-~~e~r~~~~~~~~~~~~~~kt~lC~~f~~tG~C~yG~rC~F~H~~~~~~~ 206 (332)
T KOG1677|consen 128 ERYKTPLCRSFRKSGTCKYRGEQCRFAHG-LEELRLPSSENQVGNPPKYKTKLCPKFQKTGLCKYGSRCRFIHGEPEDRA 206 (332)
T ss_pred ccccCCcceeeecCccccccCchhhhcCC-cccccccccchhhcCCCCCCCcCCCccccCCCCCCCCcCeecCCCccccc
Confidence 346777786 456776 899999994 44444 22334589999999995 599999999999999988764
No 111
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.93 E-value=4.7e-05 Score=80.89 Aligned_cols=85 Identities=25% Similarity=0.357 Sum_probs=68.9
Q ss_pred hHHHHHHHHcCCHHHHHHHHhcCCCCCcccccccccccCCccccCCCCchHHHHHhcCCHHHHHHHHHhcCCCccccCCC
Q 006947 42 FASLLELAANNDVEGFKRSIVCDPSGVDEVGLWYGRQKGSKQMVNEQRTPLMVAATYGSIDIIRLILSESGADVNLSCGN 121 (624)
Q Consensus 42 ~TpLh~AA~~Gdle~Vk~LLe~~GadvN~~~l~~~~~~~~~~~D~~G~TPLhlAA~~G~~eiVklLL~~~GADVN~~~d~ 121 (624)
+--|.+||+.||++.|+.|++ .|.+||.+ |.....||.+|+..||.++|++||++ ||-...- .-
T Consensus 37 f~elceacR~GD~d~v~~LVe-tgvnVN~v-------------D~fD~spL~lAsLcGHe~vvklLLen-GAiC~rd-tf 100 (516)
T KOG0511|consen 37 FGELCEACRAGDVDRVRYLVE-TGVNVNAV-------------DRFDSSPLYLASLCGHEDVVKLLLEN-GAICSRD-TF 100 (516)
T ss_pred hHHHHHHhhcccHHHHHHHHH-hCCCcchh-------------hcccccHHHHHHHcCcHHHHHHHHHc-CCccccc-cc
Confidence 677999999999999999999 99999988 57778999999999999999999999 8866543 45
Q ss_pred CCChHHHHHHhCCCCChHHHHHHHHHC
Q 006947 122 DKSTALHCAASGGALNAVDVVKLLLAA 148 (624)
Q Consensus 122 ~G~TPLH~Aa~~G~~~~~eiVklLL~~ 148 (624)
+|... |+++.+ ..|-+.||.+
T Consensus 101 ~G~RC-~YgaLn-----d~IR~mllsy 121 (516)
T KOG0511|consen 101 DGDRC-HYGALN-----DRIRRMLLSY 121 (516)
T ss_pred Ccchh-hhhhhh-----HHHHHHHHHH
Confidence 66654 455554 3456677765
No 112
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=97.91 E-value=1.2e-05 Score=94.58 Aligned_cols=132 Identities=20% Similarity=0.123 Sum_probs=100.8
Q ss_pred CCCCcccCccChHHHHHHHHcCCHHHHHHHHhcCCCCCcccccccccccCCccccCCCCchHHHHHhcCCHHHHHHHHHh
Q 006947 31 MNHLTVETDDAFASLLELAANNDVEGFKRSIVCDPSGVDEVGLWYGRQKGSKQMVNEQRTPLMVAATYGSIDIIRLILSE 110 (624)
Q Consensus 31 ~~~ini~d~dg~TpLh~AA~~Gdle~Vk~LLe~~GadvN~~~l~~~~~~~~~~~D~~G~TPLhlAA~~G~~eiVklLL~~ 110 (624)
.+.+....-.|++.||.++..+..-.+..+++..+...++ .|.+|.-.+|+ |..++.+++-+|+..
T Consensus 564 ~~~~~~~~~r~~lllhL~a~~lyawLie~~~e~~~~~~~e-------------ld~d~qgV~hf-ca~lg~ewA~ll~~~ 629 (975)
T KOG0520|consen 564 ENLSSSVNFRDMLLLHLLAELLYAWLIEKVIEWAGSGDLE-------------LDRDGQGVIHF-CAALGYEWAFLPISA 629 (975)
T ss_pred hhccccCCCcchHHHHHHHHHhHHHHHHHHhcccccCchh-------------hcccCCChhhH-hhhcCCceeEEEEee
Confidence 3344455667899999999999999999999842333333 36788888888 555666666666655
Q ss_pred cCCCccccCCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCCCc------CCCCCcHHHHHhcCCChhhHHHHHH
Q 006947 111 SGADVNLSCGNDKSTALHCAASGGALNAVDVVKLLLAAGADPNFV------DAKGHHPVDVIVVPPKFQDVRLTLE 180 (624)
Q Consensus 111 ~GADVN~~~d~~G~TPLH~Aa~~G~~~~~eiVklLL~~GAD~n~~------D~~G~TPLhlAa~~g~~~~~~~lLe 180 (624)
.|..++++ |..||||||+|+..|+ ..++..|++.|++.... +-.|.|+..+|..+|+....-.+-+
T Consensus 630 ~~~ai~i~-D~~G~tpL~wAa~~G~---e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia~~lse 701 (975)
T KOG0520|consen 630 DGVAIDIR-DRNGWTPLHWAAFRGR---EKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHKGIAGYLSE 701 (975)
T ss_pred cccccccc-cCCCCcccchHhhcCH---HHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccccchHHHHhh
Confidence 58999999 9999999999999999 99999999988766543 3469999999998766554444433
No 113
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=97.90 E-value=1.2e-05 Score=94.41 Aligned_cols=79 Identities=35% Similarity=0.502 Sum_probs=75.6
Q ss_pred CCCCchHHHHHhcCCHHHHHHHHHhcCCCccccCCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCCCcCCCCCcHHHH
Q 006947 86 NEQRTPLMVAATYGSIDIIRLILSESGADVNLSCGNDKSTALHCAASGGALNAVDVVKLLLAAGADPNFVDAKGHHPVDV 165 (624)
Q Consensus 86 ~~G~TPLhlAA~~G~~eiVklLL~~~GADVN~~~d~~G~TPLH~Aa~~G~~~~~eiVklLL~~GAD~n~~D~~G~TPLhl 165 (624)
..|.|+||+|+..|..-++++||+. |+++|.. +..|.||||.+...|+ ...+.+|++.||+.++.|..|.++|++
T Consensus 654 ~~~~s~lh~a~~~~~~~~~e~ll~~-ga~vn~~-d~~g~~plh~~~~~g~---~~~~~~ll~~~a~~~a~~~~~~~~l~~ 728 (785)
T KOG0521|consen 654 CIGCSLLHVAVGTGDSGAVELLLQN-GADVNAL-DSKGRTPLHHATASGH---TSIACLLLKRGADPNAFDPDGKLPLDI 728 (785)
T ss_pred hcccchhhhhhccchHHHHHHHHhc-CCcchhh-hccCCCcchhhhhhcc---cchhhhhccccccccccCccCcchhhH
Confidence 4679999999999999999999999 9999999 9999999999999999 999999999999999999999999999
Q ss_pred HhcC
Q 006947 166 IVVP 169 (624)
Q Consensus 166 Aa~~ 169 (624)
|...
T Consensus 729 a~~~ 732 (785)
T KOG0521|consen 729 AMEA 732 (785)
T ss_pred Hhhh
Confidence 9864
No 114
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=97.85 E-value=2e-05 Score=86.82 Aligned_cols=100 Identities=20% Similarity=0.187 Sum_probs=86.3
Q ss_pred CCCcccCccChHHHHHHHHcCCHHHHHHHHhcCCCCCcccccccccccCCccccCCCCchHHHHHhcCCHHHHHHHHHhc
Q 006947 32 NHLTVETDDAFASLLELAANNDVEGFKRSIVCDPSGVDEVGLWYGRQKGSKQMVNEQRTPLMVAATYGSIDIIRLILSES 111 (624)
Q Consensus 32 ~~ini~d~dg~TpLh~AA~~Gdle~Vk~LLe~~GadvN~~~l~~~~~~~~~~~D~~G~TPLhlAA~~G~~eiVklLL~~~ 111 (624)
.++-+++.+..+.||+|+..|+-++|+++|+.....+-.. .|..|.|+||-||..++-.|.++|++.
T Consensus 890 g~ll~~~~~~~sllh~a~~tg~~eivkyildh~p~elld~------------~de~get~lhkaa~~~~r~vc~~lvda- 956 (1004)
T KOG0782|consen 890 GSLLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDM------------ADETGETALHKAACQRNRAVCQLLVDA- 956 (1004)
T ss_pred CceEeeCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHH------------HhhhhhHHHHHHHHhcchHHHHHHHhc-
Confidence 3466788899999999999999999999999555443222 278999999999999999999999998
Q ss_pred CCCccccCCCCCChHHHHHHhCCCCChHHHHHHHHHC
Q 006947 112 GADVNLSCGNDKSTALHCAASGGALNAVDVVKLLLAA 148 (624)
Q Consensus 112 GADVN~~~d~~G~TPLH~Aa~~G~~~~~eiVklLL~~ 148 (624)
||..-.. |..|.||-..|-..|. .++..+|-..
T Consensus 957 gasl~kt-d~kg~tp~eraqqa~d---~dlaayle~r 989 (1004)
T KOG0782|consen 957 GASLRKT-DSKGKTPQERAQQAGD---PDLAAYLESR 989 (1004)
T ss_pred chhheec-ccCCCChHHHHHhcCC---chHHHHHhhh
Confidence 9999887 9999999999999999 8988888654
No 115
>PF00642 zf-CCCH: Zinc finger C-x8-C-x5-C-x3-H type (and similar); InterPro: IPR000571 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule. Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents C-x8-C-x5-C-x3-H (CCCH) type Zinc finger (Znf) domains. Proteins containing CCCH Znf domains include Znf proteins from eukaryotes involved in cell cycle or growth phase-related regulation, e.g. human TIS11B (butyrate response factor 1), a probable regulatory protein involved in regulating the response to growth factors, and the mouse TTP growth factor-inducible nuclear protein, which has the same function. The mouse TTP protein is induced by growth factors. Another protein containing this domain is the human splicing factor U2AF 35kDa subunit, which plays a critical role in both constitutive and enhancer-dependent splicing by mediating essential protein-protein interactions and protein-RNA interactions required for 3' splice site selection. It has been shown that different CCCH-type Znf proteins interact with the 3'-untranslated region of various mRNA [, ]. This type of Znf is very often present in two copies. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0003676 nucleic acid binding, 0008270 zinc ion binding; PDB: 1M9O_A 1RGO_A 2CQE_A 2FC6_A 2D9M_A 2E5S_A 2RHK_C 2D9N_A 3D2S_A 3D2Q_C ....
Probab=97.79 E-value=3.2e-06 Score=57.43 Aligned_cols=26 Identities=46% Similarity=0.972 Sum_probs=20.0
Q ss_pred ccccCCCCC-CCCcCCCCCcccccccc
Q 006947 301 YSCVPCPDF-RKGACRRGDMCEYAHGV 326 (624)
Q Consensus 301 y~~~~C~~~-~~g~C~~gd~C~~aH~~ 326 (624)
|++++|+.| +.|.|++|++|.|+|+.
T Consensus 1 ~k~~~C~~f~~~g~C~~G~~C~f~H~~ 27 (27)
T PF00642_consen 1 YKTKLCRFFMRTGTCPFGDKCRFAHGE 27 (27)
T ss_dssp TTSSB-HHHHHTS--TTGGGSSSBSSG
T ss_pred CccccChhhccCCccCCCCCcCccCCC
Confidence 789999999 45999999999999973
No 116
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.79 E-value=6e-05 Score=80.09 Aligned_cols=73 Identities=30% Similarity=0.284 Sum_probs=65.6
Q ss_pred chHHHHHhcCCHHHHHHHHHhcCCCccccCCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCCCcCCCCCcHHHHHh
Q 006947 90 TPLMVAATYGSIDIIRLILSESGADVNLSCGNDKSTALHCAASGGALNAVDVVKLLLAAGADPNFVDAKGHHPVDVIV 167 (624)
Q Consensus 90 TPLhlAA~~G~~eiVklLL~~~GADVN~~~d~~G~TPLH~Aa~~G~~~~~eiVklLL~~GAD~n~~D~~G~TPLhlAa 167 (624)
--|..||+.|.++.|++|++. |++||.+ |.....||.+|+..|| .++|++||++||-...-..+|...+.-|.
T Consensus 38 ~elceacR~GD~d~v~~LVet-gvnVN~v-D~fD~spL~lAsLcGH---e~vvklLLenGAiC~rdtf~G~RC~YgaL 110 (516)
T KOG0511|consen 38 GELCEACRAGDVDRVRYLVET-GVNVNAV-DRFDSSPLYLASLCGH---EDVVKLLLENGAICSRDTFDGDRCHYGAL 110 (516)
T ss_pred HHHHHHhhcccHHHHHHHHHh-CCCcchh-hcccccHHHHHHHcCc---HHHHHHHHHcCCcccccccCcchhhhhhh
Confidence 348899999999999999997 9999999 9999999999999999 99999999999988776778887765554
No 117
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=97.67 E-value=9.2e-05 Score=72.42 Aligned_cols=73 Identities=25% Similarity=0.239 Sum_probs=55.6
Q ss_pred cCCccccCCCCchHHHHHhcCCHHHHHHHHHhcC-CCccccCCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCCCcC
Q 006947 79 KGSKQMVNEQRTPLMVAATYGSIDIIRLILSESG-ADVNLSCGNDKSTALHCAASGGALNAVDVVKLLLAAGADPNFVD 156 (624)
Q Consensus 79 ~~~~~~D~~G~TPLhlAA~~G~~eiVklLL~~~G-ADVN~~~d~~G~TPLH~Aa~~G~~~~~eiVklLL~~GAD~n~~D 156 (624)
.+++..|..|+|+||.||..|+.+.|.|||.+ | ++|... +..|.+++.+|-.+|+ .++|+.|-+.-.+-...+
T Consensus 3 ~~in~rD~fgWTalmcaa~eg~~eavsyllgr-g~a~vgv~-d~ssldaaqlaek~g~---~~fvh~lfe~~~ets~p~ 76 (223)
T KOG2384|consen 3 GNINARDAFGWTALMCAAMEGSNEAVSYLLGR-GVAFVGVT-DESSLDAAQLAEKGGA---QAFVHSLFENDRETSHPM 76 (223)
T ss_pred CCccchhhhcchHHHHHhhhcchhHHHHHhcc-Cccccccc-ccccchHHHHHHhcCh---HHHHHHHHHHhccCCCcc
Confidence 45677788888888888888888888888887 6 777776 8888888888888888 888888877744443333
No 118
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=97.61 E-value=0.00011 Score=71.79 Aligned_cols=67 Identities=24% Similarity=0.188 Sum_probs=58.7
Q ss_pred CCCccccCCCCCChHHHHHHhCCCCChHHHHHHHHHCC-CCCCCcCCCCCcHHHHHhcCCChhhHHHHHHHH
Q 006947 112 GADVNLSCGNDKSTALHCAASGGALNAVDVVKLLLAAG-ADPNFVDAKGHHPVDVIVVPPKFQDVRLTLEEL 182 (624)
Q Consensus 112 GADVN~~~d~~G~TPLH~Aa~~G~~~~~eiVklLL~~G-AD~n~~D~~G~TPLhlAa~~g~~~~~~~lLe~L 182 (624)
+.+||.+ |..|||||++|+..|. .++|.+|+.+| +++...|..|.+++.+|-+.|+...+..+.+.+
T Consensus 2 e~~in~r-D~fgWTalmcaa~eg~---~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~ 69 (223)
T KOG2384|consen 2 EGNINAR-DAFGWTALMCAAMEGS---NEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFEND 69 (223)
T ss_pred CCCccch-hhhcchHHHHHhhhcc---hhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHHh
Confidence 5789999 9999999999999999 99999999999 999999999999999999966655555555543
No 119
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=97.52 E-value=0.00011 Score=86.64 Aligned_cols=91 Identities=26% Similarity=0.273 Sum_probs=80.3
Q ss_pred ccCccChHHHHHHHHcCCHHHHHHHHhcCCCCCcccccccccccCCccccCCCCchHHHHHhcCCHHHHHHHHHhcCCCc
Q 006947 36 VETDDAFASLLELAANNDVEGFKRSIVCDPSGVDEVGLWYGRQKGSKQMVNEQRTPLMVAATYGSIDIIRLILSESGADV 115 (624)
Q Consensus 36 i~d~dg~TpLh~AA~~Gdle~Vk~LLe~~GadvN~~~l~~~~~~~~~~~D~~G~TPLhlAA~~G~~eiVklLL~~~GADV 115 (624)
..-..|.+.||.|+..|+.-.+..|++ .|+++|.. |..|+||||.+...|+...+.+|+++ ||+.
T Consensus 651 ~~~~~~~s~lh~a~~~~~~~~~e~ll~-~ga~vn~~-------------d~~g~~plh~~~~~g~~~~~~~ll~~-~a~~ 715 (785)
T KOG0521|consen 651 VVLCIGCSLLHVAVGTGDSGAVELLLQ-NGADVNAL-------------DSKGRTPLHHATASGHTSIACLLLKR-GADP 715 (785)
T ss_pred hhhhcccchhhhhhccchHHHHHHHHh-cCCcchhh-------------hccCCCcchhhhhhcccchhhhhccc-cccc
Confidence 345567999999999999999999999 99999987 79999999999999999999999998 9999
Q ss_pred cccCCCCCChHHHHHHhCCCCChHHHHHHH
Q 006947 116 NLSCGNDKSTALHCAASGGALNAVDVVKLL 145 (624)
Q Consensus 116 N~~~d~~G~TPLH~Aa~~G~~~~~eiVklL 145 (624)
++. +.+|.++|++|....+ .+++-+|
T Consensus 716 ~a~-~~~~~~~l~~a~~~~~---~d~~~l~ 741 (785)
T KOG0521|consen 716 NAF-DPDGKLPLDIAMEAAN---ADIVLLL 741 (785)
T ss_pred ccc-CccCcchhhHHhhhcc---ccHHHHH
Confidence 999 9999999999987755 4444443
No 120
>KOG2494 consensus C3H1-type Zn-finger protein [Transcription]
Probab=97.48 E-value=2.4e-05 Score=81.84 Aligned_cols=65 Identities=29% Similarity=0.607 Sum_probs=53.1
Q ss_pred ccCCCCCCCCcCCCCCc-cccccccceeecCCCccccccccCC--CCCCCCccCCCCCCCCccCcccCCC
Q 006947 303 CVPCPDFRKGACRRGDM-CEYAHGVFECWLHPAQYRTRLCKDG--TSCARRVCFFAHTPEELRPLYVSTG 369 (624)
Q Consensus 303 ~~~C~~~~~g~C~~gd~-C~~aH~~~E~~~hP~~ykT~~C~~~--~~C~~~~C~FaH~~~elr~~~~~~~ 369 (624)
-+.|++|.+|+|.+||. |.|+|.-. ..+-..-|-..|-|+ |.|.|..|.|+|.+.+++.-+-.+|
T Consensus 37 ~eVCReF~rn~C~R~d~~CkfaHP~~--~~~V~~g~v~aC~Ds~kgrCsR~nCkylHpp~hlkdql~ing 104 (331)
T KOG2494|consen 37 LEVCREFLRNTCSRGDRECKFAHPPK--NCQVSNGRVIACFDSQKGRCSRENCKYLHPPQHLKDQLKING 104 (331)
T ss_pred HHHHHHHHhccccCCCccccccCCCC--CCCccCCeEEEEeccccCccCcccceecCCChhhhhhhhhcc
Confidence 35699999999999999 99999865 334445666789988 8899999999999999997664443
No 121
>smart00356 ZnF_C3H1 zinc finger.
Probab=97.44 E-value=8.4e-05 Score=49.82 Aligned_cols=26 Identities=38% Similarity=0.897 Sum_probs=23.8
Q ss_pred cccccCCCCCCCCcCCCCCccccccc
Q 006947 300 HYSCVPCPDFRKGACRRGDMCEYAHG 325 (624)
Q Consensus 300 ~y~~~~C~~~~~g~C~~gd~C~~aH~ 325 (624)
.|++.+|+.|++|.|.+|+.|.|+|.
T Consensus 1 ~~k~~~C~~~~~g~C~~g~~C~~~H~ 26 (27)
T smart00356 1 KYKTELCKFFKRGYCPYGDRCKFAHP 26 (27)
T ss_pred CCCCCcCcCccCCCCCCCCCcCCCCc
Confidence 47888999999999999999999997
No 122
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=97.30 E-value=0.00022 Score=84.21 Aligned_cols=125 Identities=14% Similarity=0.104 Sum_probs=90.4
Q ss_pred ccccCCCCchHHHHHhcCCHHHHHHHHHhcCCCccccCCCCCChHHHHHHhCCCCChHHHHHHHH-HCCCCCCCcCCCCC
Q 006947 82 KQMVNEQRTPLMVAATYGSIDIIRLILSESGADVNLSCGNDKSTALHCAASGGALNAVDVVKLLL-AAGADPNFVDAKGH 160 (624)
Q Consensus 82 ~~~D~~G~TPLhlAA~~G~~eiVklLL~~~GADVN~~~d~~G~TPLH~Aa~~G~~~~~eiVklLL-~~GAD~n~~D~~G~ 160 (624)
......|.|-||+++..+...+++.+++..|...+.. +.+|.-.+|+++..|. +..-+|+ -.|..++.+|..|+
T Consensus 568 ~~~~~r~~lllhL~a~~lyawLie~~~e~~~~~~~el-d~d~qgV~hfca~lg~----ewA~ll~~~~~~ai~i~D~~G~ 642 (975)
T KOG0520|consen 568 SSVNFRDMLLLHLLAELLYAWLIEKVIEWAGSGDLEL-DRDGQGVIHFCAALGY----EWAFLPISADGVAIDIRDRNGW 642 (975)
T ss_pred ccCCCcchHHHHHHHHHhHHHHHHHHhcccccCchhh-cccCCChhhHhhhcCC----ceeEEEEeecccccccccCCCC
Confidence 3445788999999999999999999997533333444 7788888888665554 5555554 55899999999999
Q ss_pred cHHHHHhcCCChhhHHHHHHHHHHCCCCCcccccccccccCCCCChhhhhhhcCCC
Q 006947 161 HPVDVIVVPPKFQDVRLTLEELLATDGSVERNLRVSTTTSNSNSPPLSPALENGSP 216 (624)
Q Consensus 161 TPLhlAa~~g~~~~~~~lLe~LL~~gadv~~~~~l~~a~~~~g~TpL~lA~e~Gs~ 216 (624)
||||||+. .+.+.++..|+..|++....+.. ....-.|.|+..+|-.+|+.
T Consensus 643 tpL~wAa~----~G~e~l~a~l~~lga~~~~~tdp-s~~~p~g~ta~~la~s~g~~ 693 (975)
T KOG0520|consen 643 TPLHWAAF----RGREKLVASLIELGADPGAVTDP-SPETPGGKTAADLARANGHK 693 (975)
T ss_pred cccchHhh----cCHHHHHHHHHHhccccccccCC-CCCCCCCCchhhhhhccccc
Confidence 99999998 56667777777777665522221 23344578888888777743
No 123
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=97.04 E-value=0.00096 Score=77.48 Aligned_cols=101 Identities=19% Similarity=0.147 Sum_probs=81.2
Q ss_pred cCCCCcccCccChHHHHHHHHcCCHHHHHHHHhcCCCCCcccccccccccCCccccCCCCchHHHHHhcCCHHHHHHHHH
Q 006947 30 DMNHLTVETDDAFASLLELAANNDVEGFKRSIVCDPSGVDEVGLWYGRQKGSKQMVNEQRTPLMVAATYGSIDIIRLILS 109 (624)
Q Consensus 30 d~~~ini~d~dg~TpLh~AA~~Gdle~Vk~LLe~~GadvN~~~l~~~~~~~~~~~D~~G~TPLhlAA~~G~~eiVklLL~ 109 (624)
..-++|..|.-|.++|+.|+.+.+++++..|++ .+..+ ..+|.+|+..|.+++|+++|.
T Consensus 51 ~~lninc~d~lGr~al~iai~nenle~~eLLl~-~~~~~--------------------gdALL~aI~~~~v~~VE~ll~ 109 (822)
T KOG3609|consen 51 SKLNINCRDPLGRLALHIAIDNENLELQELLLD-TSSEE--------------------GDALLLAIAVGSVPLVELLLV 109 (822)
T ss_pred cccchhccChHhhhceecccccccHHHHHHHhc-Ccccc--------------------chHHHHHHHHHHHHHHHHHHh
Confidence 345677888889999999999999999999998 54433 257999999999999999998
Q ss_pred hcCCCc---------cccCCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCCCc
Q 006947 110 ESGADV---------NLSCGNDKSTALHCAASGGALNAVDVVKLLLAAGADPNFV 155 (624)
Q Consensus 110 ~~GADV---------N~~~d~~G~TPLH~Aa~~G~~~~~eiVklLL~~GAD~n~~ 155 (624)
+. .+. +...-.-+-|||.+||..++ .||+++||+.|+++...
T Consensus 110 ~~-~~~~~~~~~~d~~~~~ft~ditPliLAAh~Nn---yEil~~Ll~kg~~i~~P 160 (822)
T KOG3609|consen 110 HF-VDAPYLERSGDANSPHFTPDITPLMLAAHLNN---FEILQCLLTRGHCIPIP 160 (822)
T ss_pred cc-cccchhccccccCcccCCCCccHHHHHHHhcc---hHHHHHHHHcCCCCCCC
Confidence 73 221 11113457899999999988 99999999999988653
No 124
>PF00642 zf-CCCH: Zinc finger C-x8-C-x5-C-x3-H type (and similar); InterPro: IPR000571 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule. Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents C-x8-C-x5-C-x3-H (CCCH) type Zinc finger (Znf) domains. Proteins containing CCCH Znf domains include Znf proteins from eukaryotes involved in cell cycle or growth phase-related regulation, e.g. human TIS11B (butyrate response factor 1), a probable regulatory protein involved in regulating the response to growth factors, and the mouse TTP growth factor-inducible nuclear protein, which has the same function. The mouse TTP protein is induced by growth factors. Another protein containing this domain is the human splicing factor U2AF 35kDa subunit, which plays a critical role in both constitutive and enhancer-dependent splicing by mediating essential protein-protein interactions and protein-RNA interactions required for 3' splice site selection. It has been shown that different CCCH-type Znf proteins interact with the 3'-untranslated region of various mRNA [, ]. This type of Znf is very often present in two copies. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0003676 nucleic acid binding, 0008270 zinc ion binding; PDB: 1M9O_A 1RGO_A 2CQE_A 2FC6_A 2D9M_A 2E5S_A 2RHK_C 2D9N_A 3D2S_A 3D2Q_C ....
Probab=96.75 E-value=0.00035 Score=47.45 Aligned_cols=23 Identities=39% Similarity=0.745 Sum_probs=17.5
Q ss_pred cccccccCC---CCCCCCc-cCCCCCC
Q 006947 336 YRTRLCKDG---TSCARRV-CFFAHTP 358 (624)
Q Consensus 336 ykT~~C~~~---~~C~~~~-C~FaH~~ 358 (624)
|||++|+.| |.|+++. |.|+|++
T Consensus 1 ~k~~~C~~f~~~g~C~~G~~C~f~H~~ 27 (27)
T PF00642_consen 1 YKTKLCRFFMRTGTCPFGDKCRFAHGE 27 (27)
T ss_dssp TTSSB-HHHHHTS--TTGGGSSSBSSG
T ss_pred CccccChhhccCCccCCCCCcCccCCC
Confidence 799999976 8999985 9999974
No 125
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=96.49 E-value=0.0052 Score=67.77 Aligned_cols=64 Identities=31% Similarity=0.355 Sum_probs=55.3
Q ss_pred HHHHHHHHHhcCCCccccC-----CCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCCCcCCCCCcHHHHHhc
Q 006947 101 IDIIRLILSESGADVNLSC-----GNDKSTALHCAASGGALNAVDVVKLLLAAGADPNFVDAKGHHPVDVIVV 168 (624)
Q Consensus 101 ~eiVklLL~~~GADVN~~~-----d~~G~TPLH~Aa~~G~~~~~eiVklLL~~GAD~n~~D~~G~TPLhlAa~ 168 (624)
.+.|++|.++ +++.|... +..-.|+||+|+..|. .++|.+||+.|+|+.++|..|+||..++..
T Consensus 404 p~~ie~lken-~lsgnf~~~pe~~~~ltsT~LH~aa~qg~---~k~v~~~Leeg~Dp~~kd~~Grtpy~ls~n 472 (591)
T KOG2505|consen 404 PDSIEALKEN-LLSGNFDVTPEANDYLTSTFLHYAAAQGA---RKCVKYFLEEGCDPSTKDGAGRTPYSLSAN 472 (591)
T ss_pred hhHHHHHHhc-CCcccccccccccccccchHHHHHHhcch---HHHHHHHHHhcCCchhcccCCCCccccccc
Confidence 5678888888 78876542 3346799999999999 999999999999999999999999999885
No 126
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=96.24 E-value=0.0067 Score=38.50 Aligned_cols=27 Identities=44% Similarity=0.898 Sum_probs=16.8
Q ss_pred CCchHHHHHhcCCHHHHHHHHHhcCCCc
Q 006947 88 QRTPLMVAATYGSIDIIRLILSESGADV 115 (624)
Q Consensus 88 G~TPLhlAA~~G~~eiVklLL~~~GADV 115 (624)
|.||||+|+..|+.+++++|++. |.++
T Consensus 2 ~~~~l~~~~~~~~~~~~~~ll~~-~~~~ 28 (30)
T smart00248 2 GRTPLHLAAENGNLEVVKLLLDK-GADI 28 (30)
T ss_pred CCCHHHHHHHcCCHHHHHHHHHc-CCCC
Confidence 45666666666666666666655 4544
No 127
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=95.94 E-value=0.013 Score=37.13 Aligned_cols=29 Identities=59% Similarity=0.771 Sum_probs=25.9
Q ss_pred CCChHHHHHHhCCCCChHHHHHHHHHCCCCCC
Q 006947 122 DKSTALHCAASGGALNAVDVVKLLLAAGADPN 153 (624)
Q Consensus 122 ~G~TPLH~Aa~~G~~~~~eiVklLL~~GAD~n 153 (624)
.|.|+||+|+..++ .+++++|++.|.+++
T Consensus 1 ~~~~~l~~~~~~~~---~~~~~~ll~~~~~~~ 29 (30)
T smart00248 1 DGRTPLHLAAENGN---LEVVKLLLDKGADIN 29 (30)
T ss_pred CCCCHHHHHHHcCC---HHHHHHHHHcCCCCC
Confidence 47899999999999 999999999988765
No 128
>KOG1040 consensus Polyadenylation factor I complex, subunit, Yth1 (CPSF subunit) [RNA processing and modification]
Probab=95.62 E-value=0.0081 Score=64.15 Aligned_cols=64 Identities=28% Similarity=0.597 Sum_probs=43.0
Q ss_pred ccCCCCCCCcccccCCCCCCcccccCCCCCCCCcCCCCCccccccccceeecCCCccccccccCC---CCCCC-CccCCC
Q 006947 280 TECPFVHPGENARRRDPRKFHYSCVPCPDFRKGACRRGDMCEYAHGVFECWLHPAQYRTRLCKDG---TSCAR-RVCFFA 355 (624)
Q Consensus 280 ~~Cpf~H~~~~~rRr~p~~~~y~~~~C~~~~~g~C~~gd~C~~aH~~~E~~~hP~~ykT~~C~~~---~~C~~-~~C~Fa 355 (624)
-.|+..|+.. + -.++.+.|++|..|.|..||.|.|.|-. ++ -|-+.|..| +.|.+ ..|.|.
T Consensus 62 ~~~~~~~~~~---~-----~~~~~~vcK~~l~glC~kgD~C~Flhe~-~~------~k~rec~ff~~~g~c~~~~~c~y~ 126 (325)
T KOG1040|consen 62 PICPKSHNDV---S-----DSRGKVVCKHWLRGLCKKGDQCEFLHEY-DL------TKMRECKFFSLFGECTNGKDCPYL 126 (325)
T ss_pred CCCccccCCc---c-----ccCCceeehhhhhhhhhccCcCcchhhh-hh------cccccccccccccccccccCCccc
Confidence 4578888432 1 3678889999999999999999999964 22 222334433 66666 346666
Q ss_pred CCC
Q 006947 356 HTP 358 (624)
Q Consensus 356 H~~ 358 (624)
|+.
T Consensus 127 h~d 129 (325)
T KOG1040|consen 127 HGD 129 (325)
T ss_pred CCC
Confidence 665
No 129
>smart00356 ZnF_C3H1 zinc finger.
Probab=95.30 E-value=0.013 Score=39.12 Aligned_cols=24 Identities=42% Similarity=0.672 Sum_probs=20.5
Q ss_pred ccccccccCC--CCCCCCc-cCCCCCC
Q 006947 335 QYRTRLCKDG--TSCARRV-CFFAHTP 358 (624)
Q Consensus 335 ~ykT~~C~~~--~~C~~~~-C~FaH~~ 358 (624)
.||+.+|+.| |.|.++. |.|.|..
T Consensus 1 ~~k~~~C~~~~~g~C~~g~~C~~~H~~ 27 (27)
T smart00356 1 KYKTELCKFFKRGYCPYGDRCKFAHPL 27 (27)
T ss_pred CCCCCcCcCccCCCCCCCCCcCCCCcC
Confidence 4799999987 8899985 9999974
No 130
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=94.41 E-value=0.051 Score=60.25 Aligned_cols=68 Identities=16% Similarity=0.065 Sum_probs=53.0
Q ss_pred HHHHHHHHhcCCCCCcccccccccccCCccccCCCCchHHHHHhcCCHHHHHHHHHhcCCCccccCCCCCChHHHHHH
Q 006947 54 VEGFKRSIVCDPSGVDEVGLWYGRQKGSKQMVNEQRTPLMVAATYGSIDIIRLILSESGADVNLSCGNDKSTALHCAA 131 (624)
Q Consensus 54 le~Vk~LLe~~GadvN~~~l~~~~~~~~~~~D~~G~TPLhlAA~~G~~eiVklLL~~~GADVN~~~d~~G~TPLH~Aa 131 (624)
...|..|.+ ++.++|.. ......+..--|+||+|+..|..++|.+||+. |+|+... |..|.||..+++
T Consensus 404 p~~ie~lke-n~lsgnf~-------~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Lee-g~Dp~~k-d~~Grtpy~ls~ 471 (591)
T KOG2505|consen 404 PDSIEALKE-NLLSGNFD-------VTPEANDYLTSTFLHYAAAQGARKCVKYFLEE-GCDPSTK-DGAGRTPYSLSA 471 (591)
T ss_pred hhHHHHHHh-cCCccccc-------ccccccccccchHHHHHHhcchHHHHHHHHHh-cCCchhc-ccCCCCcccccc
Confidence 334555555 77766653 22333455677999999999999999999999 8999999 999999999887
No 131
>KOG3702 consensus Nuclear polyadenylated RNA binding protein [RNA processing and modification]
Probab=93.99 E-value=0.062 Score=61.35 Aligned_cols=89 Identities=24% Similarity=0.422 Sum_probs=57.5
Q ss_pred cccCCCccCCCCccCCCCCCCcc-cccC-----CCCCCcccccCCCCCCCCcCCCCCcccccccccee----ecCCCccc
Q 006947 268 VRPCSRAYSHDWTECPFVHPGEN-ARRR-----DPRKFHYSCVPCPDFRKGACRRGDMCEYAHGVFEC----WLHPAQYR 337 (624)
Q Consensus 268 t~pC~r~~sh~w~~Cpf~H~~~~-~rRr-----~p~~~~y~~~~C~~~~~g~C~~gd~C~~aH~~~E~----~~hP~~yk 337 (624)
+.+|....-....+|.|+||..- ...- .+.+-.|.-..|..-.+ |..- .|.|+|+..-. -.-|..+.
T Consensus 544 l~~Cky~~~Ct~a~Ce~~HPtaa~~~~s~p~k~fa~~~~ks~p~Ck~~~k--Ctas-DC~~sH~~~~~pvq~t~ip~~~~ 620 (681)
T KOG3702|consen 544 LTRCKYGPACTSAECEFAHPTAAENAKSLPNKKFASKCLKSHPGCKFGKK--CTAS-DCNYSHAGRRIPVQPTRIPPPFP 620 (681)
T ss_pred eccccCCCcCCchhhhhcCCcchhhhhccccccccccceecccccccccc--cccc-cCcccccCCCCCCccccCCCCCC
Confidence 34566555445889999997542 0112 23344566666766555 7776 49999985432 11233343
Q ss_pred ----cccccCCCCCCCCccCCCCCCC
Q 006947 338 ----TRLCKDGTSCARRVCFFAHTPE 359 (624)
Q Consensus 338 ----T~~C~~~~~C~~~~C~FaH~~~ 359 (624)
+.+|+.+++|....|.|.|-..
T Consensus 621 ~~ti~~~CrY~pnCrnm~C~F~HPk~ 646 (681)
T KOG3702|consen 621 GGTIRGLCRYRPNCRNMQCKFYHPKT 646 (681)
T ss_pred CCCccccceeccCcCCccccccCCcc
Confidence 5789999999999999999644
No 132
>KOG1492 consensus C3H1-type Zn-finger protein [General function prediction only]
Probab=93.94 E-value=0.025 Score=56.51 Aligned_cols=66 Identities=24% Similarity=0.542 Sum_probs=48.7
Q ss_pred CccCCCCccCCCCCCCcccccCCCCCCcccccCCCCCCCCcCCCCCccccccccceeecCCCccccccccCC--CCCCCC
Q 006947 273 RAYSHDWTECPFVHPGENARRRDPRKFHYSCVPCPDFRKGACRRGDMCEYAHGVFECWLHPAQYRTRLCKDG--TSCARR 350 (624)
Q Consensus 273 r~~sh~w~~Cpf~H~~~~~rRr~p~~~~y~~~~C~~~~~g~C~~gd~C~~aH~~~E~~~hP~~ykT~~C~~~--~~C~~~ 350 (624)
.+.|-.+..|-|+| | .. .-.+||.|-+|.|...+.|.+.|-....+ ---|+.| |.|..+
T Consensus 215 ngicgkgaacrfvh--e--pt--------rkticpkflngrcnkaedcnlsheldprr-------ipacryfllgkcnnp 275 (377)
T KOG1492|consen 215 NGICGKGAACRFVH--E--PT--------RKTICPKFLNGRCNKAEDCNLSHELDPRR-------IPACRYFLLGKCNNP 275 (377)
T ss_pred CCcccCCceeeeec--c--cc--------ccccChHHhcCccCchhcCCcccccCccc-------cchhhhhhhccCCCC
Confidence 34566667899999 2 11 23589999999999999999999654332 2347776 888888
Q ss_pred ccCCCCC
Q 006947 351 VCFFAHT 357 (624)
Q Consensus 351 ~C~FaH~ 357 (624)
.|.|.|-
T Consensus 276 ncryvhi 282 (377)
T KOG1492|consen 276 NCRYVHI 282 (377)
T ss_pred CceEEEE
Confidence 8888875
No 133
>PF14608 zf-CCCH_2: Zinc finger C-x8-C-x5-C-x3-H type
Probab=93.48 E-value=0.053 Score=33.84 Aligned_cols=19 Identities=37% Similarity=0.894 Sum_probs=11.9
Q ss_pred CCCCCCCCcCCCCCccccccc
Q 006947 305 PCPDFRKGACRRGDMCEYAHG 325 (624)
Q Consensus 305 ~C~~~~~g~C~~gd~C~~aH~ 325 (624)
+|+.+.. |++|+.|.|+|.
T Consensus 1 ~Ck~~~~--C~~~~~C~f~HP 19 (19)
T PF14608_consen 1 PCKFGPN--CTNGDNCPFSHP 19 (19)
T ss_pred CCcCcCC--CCCCCcCccCCc
Confidence 3565555 777777777763
No 134
>KOG2333 consensus Uncharacterized conserved protein [General function prediction only]
Probab=92.92 E-value=0.041 Score=60.83 Aligned_cols=60 Identities=25% Similarity=0.458 Sum_probs=42.1
Q ss_pred ccccCCCCCCCC---cCCCCCccccccccceeecC--CCcccccccc---CCCCCCCCc-cCCC--CCCCCcc
Q 006947 301 YSCVPCPDFRKG---ACRRGDMCEYAHGVFECWLH--PAQYRTRLCK---DGTSCARRV-CFFA--HTPEELR 362 (624)
Q Consensus 301 y~~~~C~~~~~g---~C~~gd~C~~aH~~~E~~~h--P~~ykT~~C~---~~~~C~~~~-C~Fa--H~~~elr 362 (624)
-+-.+||....| .|.+||+|.|-|.+.-.... |++= -.|- .+|.|+|++ |.|+ |-..|=+
T Consensus 74 ~~n~LCPsli~g~~~~C~f~d~Crf~HDi~ayLatK~~Dig--~~Cp~f~s~G~Cp~G~~CRFl~aHld~~g~ 144 (614)
T KOG2333|consen 74 VQNRLCPSLIQGDISKCSFGDNCRFVHDIEAYLATKAPDIG--PSCPVFESLGFCPYGFKCRFLGAHLDIEGN 144 (614)
T ss_pred hhhccChHhhcCCCccCcccccccccccHHHHHhccCcccC--CccceeeccccCCccceeehhhcccCcccc
Confidence 367899999654 89999999999998654432 2221 2354 469999997 9996 5444433
No 135
>COG5252 Uncharacterized conserved protein, contains CCCH-type Zn-finger protein [General function prediction only]
Probab=92.85 E-value=0.019 Score=57.85 Aligned_cols=61 Identities=30% Similarity=0.557 Sum_probs=45.3
Q ss_pred cccccCCCCCCCCcCCCCCccccccccceeec--C-------------------CCccccccccCC------------CC
Q 006947 300 HYSCVPCPDFRKGACRRGDMCEYAHGVFECWL--H-------------------PAQYRTRLCKDG------------TS 346 (624)
Q Consensus 300 ~y~~~~C~~~~~g~C~~gd~C~~aH~~~E~~~--h-------------------P~~ykT~~C~~~------------~~ 346 (624)
-=|++.|-.|..+.|..|+.|.|+|+..|-+- . |++---+.|+.| =.
T Consensus 82 dpK~~vcalF~~~~c~kg~~ckF~h~~ee~r~~eK~DLYsDvRd~~ed~pl~krP~intd~VCkffieA~e~GkYgw~W~ 161 (299)
T COG5252 82 DPKTVVCALFLNKTCAKGDACKFAHGKEEARKTEKPDLYSDVRDKEEDVPLGKRPWINTDRVCKFFIEAMESGKYGWGWT 161 (299)
T ss_pred CchhHHHHHhccCccccCchhhhhcchHHHhhhcccchhhhhhhhhccCCcccCCCCChhHHHHHHHHHHhcCCccceee
Confidence 35688999999999999999999999877542 1 333334567643 12
Q ss_pred CCCC--ccCCCCCCCC
Q 006947 347 CARR--VCFFAHTPEE 360 (624)
Q Consensus 347 C~~~--~C~FaH~~~e 360 (624)
|+++ .|-|.|..-+
T Consensus 162 CPng~~~C~y~H~Lp~ 177 (299)
T COG5252 162 CPNGNMRCSYIHKLPD 177 (299)
T ss_pred CCCCCceeeeeeccCc
Confidence 9997 5999998655
No 136
>KOG1763 consensus Uncharacterized conserved protein, contains CCCH-type Zn-finger [General function prediction only]
Probab=92.23 E-value=0.02 Score=59.37 Aligned_cols=29 Identities=31% Similarity=0.780 Sum_probs=25.6
Q ss_pred ccccCCCCCCCCcCCCCCcccccccccee
Q 006947 301 YSCVPCPDFRKGACRRGDMCEYAHGVFEC 329 (624)
Q Consensus 301 y~~~~C~~~~~g~C~~gd~C~~aH~~~E~ 329 (624)
=|+..|-.|..|.|..|++|.|+|+..+.
T Consensus 90 PKSvvCafFk~g~C~KG~kCKFsHdl~~~ 118 (343)
T KOG1763|consen 90 PKSVVCAFFKQGTCTKGDKCKFSHDLAVE 118 (343)
T ss_pred chHHHHHHHhccCCCCCCcccccchHHHh
Confidence 35889999999999999999999997553
No 137
>KOG1040 consensus Polyadenylation factor I complex, subunit, Yth1 (CPSF subunit) [RNA processing and modification]
Probab=91.66 E-value=0.12 Score=55.26 Aligned_cols=77 Identities=29% Similarity=0.467 Sum_probs=52.4
Q ss_pred CccCCCCccCCCCCCCcccccCCCCCCcccccCCCCC-CCCcCCCCCccccccccceeecCCCccccccccCC--CCCCC
Q 006947 273 RAYSHDWTECPFVHPGENARRRDPRKFHYSCVPCPDF-RKGACRRGDMCEYAHGVFECWLHPAQYRTRLCKDG--TSCAR 349 (624)
Q Consensus 273 r~~sh~w~~Cpf~H~~~~~rRr~p~~~~y~~~~C~~~-~~g~C~~gd~C~~aH~~~E~~~hP~~ykT~~C~~~--~~C~~ 349 (624)
++.|-..++|.|.|-.. -.+- -.|.+| ..|.|..|+.|.|-|+.. .-+-+.|+-+ |.|+.
T Consensus 85 ~glC~kgD~C~Flhe~~--~~k~--------rec~ff~~~g~c~~~~~c~y~h~dp-------qt~~k~c~~~~~g~c~~ 147 (325)
T KOG1040|consen 85 RGLCKKGDQCEFLHEYD--LTKM--------RECKFFSLFGECTNGKDCPYLHGDP-------QTAIKKCKWYKEGFCRG 147 (325)
T ss_pred hhhhhccCcCcchhhhh--hccc--------ccccccccccccccccCCcccCCCh-------hhhhhccchhhhccCCC
Confidence 56677778999999321 1111 146666 568899999999999975 3445567644 77777
Q ss_pred C-ccCCCCCCCCccCccc
Q 006947 350 R-VCFFAHTPEELRPLYV 366 (624)
Q Consensus 350 ~-~C~FaH~~~elr~~~~ 366 (624)
+ .|.+.|....+.+.|.
T Consensus 148 g~~c~~~h~~~~~c~~y~ 165 (325)
T KOG1040|consen 148 GPSCKKRHERKVLCPPYN 165 (325)
T ss_pred cchhhhhhhcccCCCchh
Confidence 5 5888888876655553
No 138
>KOG2494 consensus C3H1-type Zn-finger protein [Transcription]
Probab=89.91 E-value=0.19 Score=53.31 Aligned_cols=69 Identities=32% Similarity=0.543 Sum_probs=45.3
Q ss_pred cccCccccccccccccccccCCCccCCCCccCCCCCCCcccccCCCCCCcccccCCCCCCCCcCCCCCccccccccceee
Q 006947 251 IKNSIYSTDEFRMYSFKVRPCSRAYSHDWTECPFVHPGENARRRDPRKFHYSCVPCPDFRKGACRRGDMCEYAHGVFECW 330 (624)
Q Consensus 251 iknsiYssDeFrmy~fKt~pC~r~~sh~w~~Cpf~H~~~~~rRr~p~~~~y~~~~C~~~~~g~C~~gd~C~~aH~~~E~~ 330 (624)
+|..-|.+++.. .+|....|.|+ ..||.|+||.++ .... +=+-..|=++.||.|.+ |+|.|.|...++.
T Consensus 29 ~kd~~wl~~eVC-ReF~rn~C~R~----d~~CkfaHP~~~---~~V~--~g~v~aC~Ds~kgrCsR-~nCkylHpp~hlk 97 (331)
T KOG2494|consen 29 VKDTKWLTLEVC-REFLRNTCSRG----DRECKFAHPPKN---CQVS--NGRVIACFDSQKGRCSR-ENCKYLHPPQHLK 97 (331)
T ss_pred ccccchhHHHHH-HHHHhccccCC----CccccccCCCCC---CCcc--CCeEEEEeccccCccCc-ccceecCCChhhh
Confidence 444455555443 34555666655 245999998763 2223 33345699999999998 5799999986653
No 139
>COG5084 YTH1 Cleavage and polyadenylation specificity factor (CPSF) Clipper subunit and related makorin family Zn-finger proteins [General function prediction only]
Probab=89.33 E-value=0.39 Score=50.58 Aligned_cols=64 Identities=28% Similarity=0.507 Sum_probs=48.3
Q ss_pred cCCCCCCCcccccCCCCCCcccccCCCCCCCCcCCCCCccccccccceeecCCCccccccccCC---CCCCCC-ccCCCC
Q 006947 281 ECPFVHPGENARRRDPRKFHYSCVPCPDFRKGACRRGDMCEYAHGVFECWLHPAQYRTRLCKDG---TSCARR-VCFFAH 356 (624)
Q Consensus 281 ~Cpf~H~~~~~rRr~p~~~~y~~~~C~~~~~g~C~~gd~C~~aH~~~E~~~hP~~ykT~~C~~~---~~C~~~-~C~FaH 356 (624)
.|++.|- +|+ .|..+.|+.|..|.|+.|+.|+|.|+..=. |+ -+-.|+.| |.|..+ .|.+.|
T Consensus 91 s~~~~~~-------~~~--~~s~V~c~~~~~g~c~s~~~c~~lh~~d~~--~s---~~~~c~~Fs~~G~cs~g~~c~~~h 156 (285)
T COG5084 91 STPNNHV-------NPV--LSSSVVCKFFLRGLCKSGFSCEFLHEYDLR--SS---QGPPCRSFSLKGSCSSGPSCGYSH 156 (285)
T ss_pred cCCcccc-------Ccc--ccCCcccchhccccCcCCCccccccCCCcc--cc---cCCCcccccccceeccCCCCCccc
Confidence 6777772 122 788999999999999999999999984211 11 25568876 889995 599999
Q ss_pred CC
Q 006947 357 TP 358 (624)
Q Consensus 357 ~~ 358 (624)
..
T Consensus 157 ~d 158 (285)
T COG5084 157 ID 158 (285)
T ss_pred cC
Confidence 85
No 140
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=88.68 E-value=2.1 Score=43.66 Aligned_cols=118 Identities=13% Similarity=0.124 Sum_probs=83.5
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCCCcccccccccccCCccccCCCCchHHHHHhcCCHHHHHHHHHhcCCCccccCC---
Q 006947 44 SLLELAANNDVEGFKRSIVCDPSGVDEVGLWYGRQKGSKQMVNEQRTPLMVAATYGSIDIIRLILSESGADVNLSCG--- 120 (624)
Q Consensus 44 pLh~AA~~Gdle~Vk~LLe~~GadvN~~~l~~~~~~~~~~~D~~G~TPLhlAA~~G~~eiVklLL~~~GADVN~~~d--- 120 (624)
.|-.|+..-+++.+-.++..+ .+-.++|-+|..++..+|+.+||.+. ....+ |
T Consensus 156 sledAV~AsN~~~i~~~VtdK---------------------kdA~~Am~~si~~~K~dva~~lls~f--~ft~~-dv~~ 211 (284)
T PF06128_consen 156 SLEDAVKASNYEEISNLVTDK---------------------KDAHQAMWLSIGNAKEDVALYLLSKF--NFTKQ-DVAS 211 (284)
T ss_pred cHHHHHhhcCHHHHHHHhcch---------------------HHHHHHHHHHhcccHHHHHHHHHhhc--ceecc-hhhh
Confidence 377888888888888887711 23357899999999999999999763 22222 1
Q ss_pred -CCCChHHHHHHhCCCCChHHHHHHHHHCC-CCCCCc---CCCCCcHHHHHhcCCChhhHHHHHHHHHHCCCCCc
Q 006947 121 -NDKSTALHCAASGGALNAVDVVKLLLAAG-ADPNFV---DAKGHHPVDVIVVPPKFQDVRLTLEELLATDGSVE 190 (624)
Q Consensus 121 -~~G~TPLH~Aa~~G~~~~~eiVklLL~~G-AD~n~~---D~~G~TPLhlAa~~g~~~~~~~lLe~LL~~gadv~ 190 (624)
..+.--+-++...-. .+..++++.|.+| +++|.. -+.|.|-|+-|+. ...++++..|+++||...
T Consensus 212 ~~~~~ydieY~LS~h~-a~~kvL~~Fi~~Glv~vN~~F~~~NSGdtMLDNA~K----y~~~emi~~Llk~GA~~~ 281 (284)
T PF06128_consen 212 MEKELYDIEYLLSEHS-ASYKVLEYFINRGLVDVNKKFQKVNSGDTMLDNAMK----YKNSEMIAFLLKYGAISG 281 (284)
T ss_pred cCcchhhHHHHHhhcC-CcHHHHHHHHhccccccchhhhccCCcchHHHhHHh----cCcHHHHHHHHHcCcccc
Confidence 122223444433211 2378999999998 678763 4589999999998 677899999999998543
No 141
>PF14608 zf-CCCH_2: Zinc finger C-x8-C-x5-C-x3-H type
Probab=88.39 E-value=0.33 Score=30.31 Aligned_cols=18 Identities=39% Similarity=0.862 Sum_probs=15.7
Q ss_pred cccCCCCCCCC-ccCCCCC
Q 006947 340 LCKDGTSCARR-VCFFAHT 357 (624)
Q Consensus 340 ~C~~~~~C~~~-~C~FaH~ 357 (624)
.|+.|.+|.++ .|.|+|-
T Consensus 1 ~Ck~~~~C~~~~~C~f~HP 19 (19)
T PF14608_consen 1 PCKFGPNCTNGDNCPFSHP 19 (19)
T ss_pred CCcCcCCCCCCCcCccCCc
Confidence 48988999998 7999993
No 142
>COG5152 Uncharacterized conserved protein, contains RING and CCCH-type Zn-fingers [General function prediction only]
Probab=86.79 E-value=0.26 Score=48.74 Aligned_cols=31 Identities=26% Similarity=0.592 Sum_probs=27.3
Q ss_pred CCcccccCCCCC-CCCcCCCCCccccccccce
Q 006947 298 KFHYSCVPCPDF-RKGACRRGDMCEYAHGVFE 328 (624)
Q Consensus 298 ~~~y~~~~C~~~-~~g~C~~gd~C~~aH~~~E 328 (624)
-.-|.+..|.+| .+|.|-|||.|.|.|.+..
T Consensus 136 viD~qpdVCKdyk~TGYCGYGDsCKflH~R~D 167 (259)
T COG5152 136 VIDTQPDVCKDYKETGYCGYGDSCKFLHDRSD 167 (259)
T ss_pred eeecCcccccchhhcccccCCchhhhhhhhhh
Confidence 357889999999 5799999999999999873
No 143
>KOG3702 consensus Nuclear polyadenylated RNA binding protein [RNA processing and modification]
Probab=82.29 E-value=1.8 Score=49.90 Aligned_cols=77 Identities=27% Similarity=0.538 Sum_probs=54.1
Q ss_pred ccCCCccCCCCccCCCCCCCcccccCCCCCCcccccCCCCC---CCCcCCCCCccccccccceeecCCCccccccccCCC
Q 006947 269 RPCSRAYSHDWTECPFVHPGENARRRDPRKFHYSCVPCPDF---RKGACRRGDMCEYAHGVFECWLHPAQYRTRLCKDGT 345 (624)
Q Consensus 269 ~pC~r~~sh~w~~Cpf~H~~~~~rRr~p~~~~y~~~~C~~~---~~g~C~~gd~C~~aH~~~E~~~hP~~ykT~~C~~~~ 345 (624)
..|.-+.-.--..|.|.| .+|+.|-. |++.+|+.- ..+-|+|+-.|. ......+|| +.|+.+.
T Consensus 586 p~Ck~~~kCtasDC~~sH----~~~~~pvq--~t~ip~~~~~~ti~~~CrY~pnCr---nm~C~F~HP-----k~cRf~~ 651 (681)
T KOG3702|consen 586 PGCKFGKKCTASDCNYSH----AGRRIPVQ--PTRIPPPFPGGTIRGLCRYRPNCR---NMQCKFYHP-----KTCRFNT 651 (681)
T ss_pred cccccccccccccCcccc----cCCCCCCc--cccCCCCCCCCCccccceeccCcC---CccccccCC-----ccccccc
Confidence 334444444456799999 34666774 888888866 357899888775 333445788 6799889
Q ss_pred CCC-CCccCCCCCCC
Q 006947 346 SCA-RRVCFFAHTPE 359 (624)
Q Consensus 346 ~C~-~~~C~FaH~~~ 359 (624)
+|+ +..|-|.|-.-
T Consensus 652 ~c~~~~sc~fYh~r~ 666 (681)
T KOG3702|consen 652 NCPNNPSCTFYHERP 666 (681)
T ss_pred cCCCCcccccccCCc
Confidence 999 46799999743
No 144
>KOG2185 consensus Predicted RNA-processing protein, contains G-patch domain [RNA processing and modification]
Probab=82.00 E-value=0.8 Score=49.89 Aligned_cols=56 Identities=30% Similarity=0.592 Sum_probs=38.0
Q ss_pred ccCCCccCCCCccCCCCCCCcc----cccCCCCCC----cccccCCCCCCCCcCCCCCcccccccc
Q 006947 269 RPCSRAYSHDWTECPFVHPGEN----ARRRDPRKF----HYSCVPCPDFRKGACRRGDMCEYAHGV 326 (624)
Q Consensus 269 ~pC~r~~sh~w~~Cpf~H~~~~----~rRr~p~~~----~y~~~~C~~~~~g~C~~gd~C~~aH~~ 326 (624)
..|.-.+.+.|- -|+||+-- ...|.-.-| +-.-.+|++|-.|.|+.|.+|.|+||.
T Consensus 100 sKcsaph~ss~g--l~yHna~I~g~E~sarvRVlfl~PTh~sMkpC~ffLeg~CRF~enCRfSHG~ 163 (486)
T KOG2185|consen 100 SKCSAPHTSSRG--LYYHNARIIGFEGSARVRVLFLTPTHESMKPCKFFLEGRCRFGENCRFSHGL 163 (486)
T ss_pred CcccccccCCcc--ceecceeEEeeccccceEEEeecCcchhhccchHhhccccccCcccccccCc
Confidence 457777777776 67786421 111211223 334468999999999999999999997
No 145
>KOG1492 consensus C3H1-type Zn-finger protein [General function prediction only]
Probab=81.31 E-value=1.5 Score=44.07 Aligned_cols=74 Identities=28% Similarity=0.532 Sum_probs=46.8
Q ss_pred ccCCCCccCCCCCCCcccccCCCCCCcccccCCCCCCCCcCCCCCccccccccceee----cCCCcc---------cc--
Q 006947 274 AYSHDWTECPFVHPGENARRRDPRKFHYSCVPCPDFRKGACRRGDMCEYAHGVFECW----LHPAQY---------RT-- 338 (624)
Q Consensus 274 ~~sh~w~~Cpf~H~~~~~rRr~p~~~~y~~~~C~~~~~g~C~~gd~C~~aH~~~E~~----~hP~~y---------kT-- 338 (624)
++|..-..|-..| |-+.||-|. |+.|--|+|..- .|.|-|-...-. +.=.+| |.
T Consensus 242 grcnkaedcnlsh--eldprripa--------cryfllgkcnnp-ncryvhihysenapicfefakygfcelgtscknqh 310 (377)
T KOG1492|consen 242 GRCNKAEDCNLSH--ELDPRRIPA--------CRYFLLGKCNNP-NCRYVHIHYSENAPICFEFAKYGFCELGTSCKNQH 310 (377)
T ss_pred CccCchhcCCccc--ccCccccch--------hhhhhhccCCCC-CceEEEEeecCCCceeeeehhcceeccccccccce
Confidence 4566677788888 567777665 888888888764 788877531110 000011 11
Q ss_pred -ccccCC---CCCCCCccCCCCCC
Q 006947 339 -RLCKDG---TSCARRVCFFAHTP 358 (624)
Q Consensus 339 -~~C~~~---~~C~~~~C~FaH~~ 358 (624)
-.|.++ |.|..+.|...|+.
T Consensus 311 ilqctdyamfgscnnpqcslyhga 334 (377)
T KOG1492|consen 311 ILQCTDYAMFGSCNNPQCSLYHGA 334 (377)
T ss_pred eeeecchhhhcCCCCCcceeecce
Confidence 125553 88999999999884
No 146
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=80.80 E-value=4.1 Score=41.69 Aligned_cols=99 Identities=16% Similarity=0.091 Sum_probs=68.9
Q ss_pred ccChHHHHHHHHcCCHHHHHHHHhcCCCCCcccccccccccCCccccCCCCchHHHH--HhcCCHHHHHHHHHhcCCCcc
Q 006947 39 DDAFASLLELAANNDVEGFKRSIVCDPSGVDEVGLWYGRQKGSKQMVNEQRTPLMVA--ATYGSIDIIRLILSESGADVN 116 (624)
Q Consensus 39 ~dg~TpLh~AA~~Gdle~Vk~LLe~~GadvN~~~l~~~~~~~~~~~D~~G~TPLhlA--A~~G~~eiVklLL~~~GADVN 116 (624)
++..++|..+..++..+++-+||.... ....+ ...+. .+.--+-++ ....+..|++++|+++-++||
T Consensus 177 kdA~~Am~~si~~~K~dva~~lls~f~--ft~~d--------v~~~~-~~~ydieY~LS~h~a~~kvL~~Fi~~Glv~vN 245 (284)
T PF06128_consen 177 KDAHQAMWLSIGNAKEDVALYLLSKFN--FTKQD--------VASME-KELYDIEYLLSEHSASYKVLEYFINRGLVDVN 245 (284)
T ss_pred HHHHHHHHHHhcccHHHHHHHHHhhcc--eecch--------hhhcC-cchhhHHHHHhhcCCcHHHHHHHHhccccccc
Confidence 456788999998888888888887322 21111 00111 111123333 334568899999999668888
Q ss_pred ccC--CCCCChHHHHHHhCCCCChHHHHHHHHHCCCC
Q 006947 117 LSC--GNDKSTALHCAASGGALNAVDVVKLLLAAGAD 151 (624)
Q Consensus 117 ~~~--d~~G~TPLH~Aa~~G~~~~~eiVklLL~~GAD 151 (624)
..- .+.|.|-|.-|...+. .+++.+||++||-
T Consensus 246 ~~F~~~NSGdtMLDNA~Ky~~---~emi~~Llk~GA~ 279 (284)
T PF06128_consen 246 KKFQKVNSGDTMLDNAMKYKN---SEMIAFLLKYGAI 279 (284)
T ss_pred hhhhccCCcchHHHhHHhcCc---HHHHHHHHHcCcc
Confidence 542 4679999999999999 9999999999984
No 147
>COG5084 YTH1 Cleavage and polyadenylation specificity factor (CPSF) Clipper subunit and related makorin family Zn-finger proteins [General function prediction only]
Probab=80.31 E-value=11 Score=39.98 Aligned_cols=73 Identities=29% Similarity=0.567 Sum_probs=50.4
Q ss_pred ccCCCCccCCCCCCCcccccCCCCCCcccccCCCCC-CCCcCCCCCccccccccceeecCCCcccccccc-----CCCCC
Q 006947 274 AYSHDWTECPFVHPGENARRRDPRKFHYSCVPCPDF-RKGACRRGDMCEYAHGVFECWLHPAQYRTRLCK-----DGTSC 347 (624)
Q Consensus 274 ~~sh~w~~Cpf~H~~~~~rRr~p~~~~y~~~~C~~~-~~g~C~~gd~C~~aH~~~E~~~hP~~ykT~~C~-----~~~~C 347 (624)
+.|-....|+|.| +- ++++ . ....|+.| ..|.|..|..|.|.|.. |+. +-..|. ..+.|
T Consensus 113 g~c~s~~~c~~lh-~~-d~~~-----s-~~~~c~~Fs~~G~cs~g~~c~~~h~d------p~~-~~~~~~~~~~~~~~f~ 177 (285)
T COG5084 113 GLCKSGFSCEFLH-EY-DLRS-----S-QGPPCRSFSLKGSCSSGPSCGYSHID------PDS-FAGNCDQYSGATYGFC 177 (285)
T ss_pred ccCcCCCcccccc-CC-Cccc-----c-cCCCcccccccceeccCCCCCccccC------ccc-ccccccccCccccccc
Confidence 3444456799999 22 2332 2 57789999 88999999999999985 322 112243 24679
Q ss_pred CCCc-cCCCCCCCCc
Q 006947 348 ARRV-CFFAHTPEEL 361 (624)
Q Consensus 348 ~~~~-C~FaH~~~el 361 (624)
+.+. |.|-|+..-+
T Consensus 178 p~g~~c~~~H~~~~~ 192 (285)
T COG5084 178 PLGASCKFSHTLKRV 192 (285)
T ss_pred CCCCccccccccccc
Confidence 9975 9999997643
No 148
>KOG1813 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=79.36 E-value=0.8 Score=48.10 Aligned_cols=55 Identities=25% Similarity=0.725 Sum_probs=41.2
Q ss_pred CCcccccCCCCC-CCCcCCCCCcccccccccee---ec-C------------------CCccccccccCC------CCCC
Q 006947 298 KFHYSCVPCPDF-RKGACRRGDMCEYAHGVFEC---WL-H------------------PAQYRTRLCKDG------TSCA 348 (624)
Q Consensus 298 ~~~y~~~~C~~~-~~g~C~~gd~C~~aH~~~E~---~~-h------------------P~~ykT~~C~~~------~~C~ 348 (624)
..-|.+.+|++| ++|.|-|||.|.|-|.+... |+ | +.-+++-+|+.. +.|.
T Consensus 181 ~~d~qpDicKdykeTgycg~gdSckFlh~r~DyK~GWqi~~e~d~~ke~~~~~~~D~~~~Pf~c~icr~~f~~pVvt~c~ 260 (313)
T KOG1813|consen 181 RIDYQPDICKDYKETGYCGYGDSCKFLHDRSDYKAGWQIEFEWDSAKEKKRVKIEDIELLPFKCFICRKYFYRPVVTKCG 260 (313)
T ss_pred eeecCchhhhhhHhhCcccccchhhhhhhhhhccccceeehhhhccccccceecCCcccCCccccccccccccchhhcCC
Confidence 457999999999 67999999999999998744 22 1 223778888754 5687
Q ss_pred CCcc
Q 006947 349 RRVC 352 (624)
Q Consensus 349 ~~~C 352 (624)
-.+|
T Consensus 261 h~fc 264 (313)
T KOG1813|consen 261 HYFC 264 (313)
T ss_pred ceee
Confidence 6653
No 149
>KOG4791 consensus Uncharacterized conserved protein [Function unknown]
Probab=78.79 E-value=0.84 Score=50.55 Aligned_cols=68 Identities=28% Similarity=0.522 Sum_probs=46.8
Q ss_pred CCCCccCCCCCCCcccccCCCCCCcccccCCCCCCCCcCCCCCccccccccceeecCCCccccccccCC---CCCCCCcc
Q 006947 276 SHDWTECPFVHPGENARRRDPRKFHYSCVPCPDFRKGACRRGDMCEYAHGVFECWLHPAQYRTRLCKDG---TSCARRVC 352 (624)
Q Consensus 276 sh~w~~Cpf~H~~~~~rRr~p~~~~y~~~~C~~~~~g~C~~gd~C~~aH~~~E~~~hP~~ykT~~C~~~---~~C~~~~C 352 (624)
|--.++|+|.| .|.++.- -..|..|..+.|... .|.|-|+.+-.. ..-+.|..+ .+|....|
T Consensus 14 cKk~d~c~~rh-~E~al~n--------~t~C~~w~~~~~C~k-~C~YRHSe~~~k-----r~e~~CYwe~~p~gC~k~~C 78 (667)
T KOG4791|consen 14 CKKGDSCPFRH-CEAALGN--------ETVCTLWQEGRCCRK-VCRYRHSEIDKK-----RSEIPCYWENQPTGCQKLNC 78 (667)
T ss_pred hhccCcCcchh-hHHHhcC--------cchhhhhhhcCcccc-cccchhhHHhhh-----cCcccceeecCCCccCCCcc
Confidence 33457899999 5533322 135999976655443 899999966554 344678744 56999999
Q ss_pred CCCCCC
Q 006947 353 FFAHTP 358 (624)
Q Consensus 353 ~FaH~~ 358 (624)
-|-|+-
T Consensus 79 gfRH~~ 84 (667)
T KOG4791|consen 79 GFRHNR 84 (667)
T ss_pred ccccCC
Confidence 999964
No 150
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=71.61 E-value=6.5 Score=32.94 Aligned_cols=47 Identities=19% Similarity=0.297 Sum_probs=38.9
Q ss_pred chHHHHHhcCCHHHHHHHHHhcCCCccccCCCCCChHHHHHHhCCCCChHHHHHHHHHC
Q 006947 90 TPLMVAATYGSIDIIRLILSESGADVNLSCGNDKSTALHCAASGGALNAVDVVKLLLAA 148 (624)
Q Consensus 90 TPLhlAA~~G~~eiVklLL~~~GADVN~~~d~~G~TPLH~Aa~~G~~~~~eiVklLL~~ 148 (624)
..|..|+..|+.||++.+++. + .++ ...|..|+..-+ .+++++|++.
T Consensus 8 ~tl~~Ai~GGN~eII~~c~~~-~-~~~-------~~~l~~AI~~H~---n~i~~~l~~~ 54 (76)
T PF11929_consen 8 KTLEYAIIGGNFEIINICLKK-N-KPD-------NDCLEYAIKSHN---NEIADWLIEN 54 (76)
T ss_pred HHHHHHHhCCCHHHHHHHHHH-h-ccH-------HHHHHHHHHHhh---HHHHHHHHHh
Confidence 458999999999999999976 2 333 247999999888 9999999986
No 151
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=69.76 E-value=9.7 Score=31.87 Aligned_cols=51 Identities=12% Similarity=0.010 Sum_probs=41.0
Q ss_pred hHHHHHHHHcCCHHHHHHHHhcCCCCCcccccccccccCCccccCCCCchHHHHHhcCCHHHHHHHHHhcCC
Q 006947 42 FASLLELAANNDVEGFKRSIVCDPSGVDEVGLWYGRQKGSKQMVNEQRTPLMVAATYGSIDIIRLILSESGA 113 (624)
Q Consensus 42 ~TpLh~AA~~Gdle~Vk~LLe~~GadvN~~~l~~~~~~~~~~~D~~G~TPLhlAA~~G~~eiVklLL~~~GA 113 (624)
...|..|+..|+.|+++.+++ .+ .++ ...|..|+...+.+++++|+++...
T Consensus 7 ~~tl~~Ai~GGN~eII~~c~~-~~-~~~-------------------~~~l~~AI~~H~n~i~~~l~~~y~~ 57 (76)
T PF11929_consen 7 KKTLEYAIIGGNFEIINICLK-KN-KPD-------------------NDCLEYAIKSHNNEIADWLIENYNL 57 (76)
T ss_pred HHHHHHHHhCCCHHHHHHHHH-Hh-ccH-------------------HHHHHHHHHHhhHHHHHHHHHhcCC
Confidence 356899999999999999997 32 222 2469999999999999999988533
No 152
>KOG1039 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=57.95 E-value=4 Score=44.31 Aligned_cols=24 Identities=33% Similarity=0.890 Sum_probs=22.7
Q ss_pred cCCCCCCCCcCCCCCccccccccc
Q 006947 304 VPCPDFRKGACRRGDMCEYAHGVF 327 (624)
Q Consensus 304 ~~C~~~~~g~C~~gd~C~~aH~~~ 327 (624)
.+|+.|.+|.|.+|+.|.|.|...
T Consensus 9 tic~~~~~g~c~~g~~cr~~h~~~ 32 (344)
T KOG1039|consen 9 TICKYYQKGNCKFGDLCRLSHSLP 32 (344)
T ss_pred hhhhhcccccccccceeeeeccCc
Confidence 789999999999999999999975
No 153
>KOG0153 consensus Predicted RNA-binding protein (RRM superfamily) [General function prediction only]
Probab=57.22 E-value=5.9 Score=42.64 Aligned_cols=36 Identities=33% Similarity=0.565 Sum_probs=29.6
Q ss_pred ccCCCCCCcccccCCCCCCCCcCCCCCccccccccc
Q 006947 292 RRRDPRKFHYSCVPCPDFRKGACRRGDMCEYAHGVF 327 (624)
Q Consensus 292 rRr~p~~~~y~~~~C~~~~~g~C~~gd~C~~aH~~~ 327 (624)
.||.|..-+=.+.+|..|.+|.|++|+.|.|-|-+-
T Consensus 150 ~rt~p~ykrn~p~Icsf~v~geckRG~ec~yrhEkp 185 (377)
T KOG0153|consen 150 QRTTPYYKRNRPHICSFFVKGECKRGAECPYRHEKP 185 (377)
T ss_pred hccCccccCCCCccccceeeccccccccccccccCC
Confidence 466666556677889999999999999999999754
No 154
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=53.61 E-value=65 Score=32.15 Aligned_cols=44 Identities=23% Similarity=0.224 Sum_probs=30.3
Q ss_pred HHHHHhCCCCChHHHHHHHHHCCCCCCCcCCCCCcHHHHHhcCCChhhHHHHHHHHH
Q 006947 127 LHCAASGGALNAVDVVKLLLAAGADPNFVDAKGHHPVDVIVVPPKFQDVRLTLEELL 183 (624)
Q Consensus 127 LH~Aa~~G~~~~~eiVklLL~~GAD~n~~D~~G~TPLhlAa~~g~~~~~~~lLe~LL 183 (624)
|..|+..|- ...|.-.|++|.+++. +.|..|+. ...++++.+++
T Consensus 147 l~~a~~kgl---l~F~letlkygg~~~~------~vls~Av~----ynhRkIL~yfi 190 (192)
T PF03158_consen 147 LEKAAAKGL---LPFVLETLKYGGNVDI------IVLSQAVK----YNHRKILDYFI 190 (192)
T ss_pred HHHHHHCCC---HHHHHHHHHcCCcccH------HHHHHHHH----hhHHHHHHHhh
Confidence 556777777 7777777777776653 56777776 56667776665
No 155
>KOG1763 consensus Uncharacterized conserved protein, contains CCCH-type Zn-finger [General function prediction only]
Probab=52.33 E-value=3.3 Score=43.52 Aligned_cols=27 Identities=19% Similarity=0.321 Sum_probs=17.7
Q ss_pred ccCCCCccCCCCCCCcccccCCCCCCcc
Q 006947 274 AYSHDWTECPFVHPGENARRRDPRKFHY 301 (624)
Q Consensus 274 ~~sh~w~~Cpf~H~~~~~rRr~p~~~~y 301 (624)
+.|..++.|-|+| ...-.|+.+..--|
T Consensus 101 g~C~KG~kCKFsH-dl~~~~k~eK~dly 127 (343)
T KOG1763|consen 101 GTCTKGDKCKFSH-DLAVERKKEKIDLY 127 (343)
T ss_pred cCCCCCCcccccc-hHHHhhhccchhcc
Confidence 4555668899999 66666665553333
No 156
>KOG4791 consensus Uncharacterized conserved protein [Function unknown]
Probab=44.84 E-value=6.1 Score=44.10 Aligned_cols=53 Identities=25% Similarity=0.533 Sum_probs=36.0
Q ss_pred cCCCCCCCCcCCCCCccccccccceeecCCCccccccccCC--CCCCCCccCCCCCCCCcc
Q 006947 304 VPCPDFRKGACRRGDMCEYAHGVFECWLHPAQYRTRLCKDG--TSCARRVCFFAHTPEELR 362 (624)
Q Consensus 304 ~~C~~~~~g~C~~gd~C~~aH~~~E~~~hP~~ykT~~C~~~--~~C~~~~C~FaH~~~elr 362 (624)
.-|-.|....|+.+|.|.|.|...-+.. -..|..| +-|-+.+|.|-|++-.+.
T Consensus 4 ~dcyff~ys~cKk~d~c~~rh~E~al~n------~t~C~~w~~~~~C~k~C~YRHSe~~~k 58 (667)
T KOG4791|consen 4 EDCYFFFYSTCKKGDSCPFRHCEAALGN------ETVCTLWQEGRCCRKVCRYRHSEIDKK 58 (667)
T ss_pred ccchhhhhhhhhccCcCcchhhHHHhcC------cchhhhhhhcCcccccccchhhHHhhh
Confidence 3477777778999999999998543321 1246666 445556888888865543
No 157
>COG5152 Uncharacterized conserved protein, contains RING and CCCH-type Zn-fingers [General function prediction only]
Probab=40.30 E-value=12 Score=37.42 Aligned_cols=24 Identities=29% Similarity=0.652 Sum_probs=20.2
Q ss_pred ccccCC---CCCCCCc-cCCCCCCCCcc
Q 006947 339 RLCKDG---TSCARRV-CFFAHTPEELR 362 (624)
Q Consensus 339 ~~C~~~---~~C~~~~-C~FaH~~~elr 362 (624)
-.|++| |+|-|+. |.|.|..++..
T Consensus 142 dVCKdyk~TGYCGYGDsCKflH~R~D~K 169 (259)
T COG5152 142 DVCKDYKETGYCGYGDSCKFLHDRSDFK 169 (259)
T ss_pred ccccchhhcccccCCchhhhhhhhhhhh
Confidence 458887 9999997 99999988655
No 158
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=39.95 E-value=41 Score=33.50 Aligned_cols=45 Identities=20% Similarity=0.261 Sum_probs=38.9
Q ss_pred HHHHHhcCCHHHHHHHHHhcCCCccccCCCCCChHHHHHHhCCCCChHHHHHHHHH
Q 006947 92 LMVAATYGSIDIIRLILSESGADVNLSCGNDKSTALHCAASGGALNAVDVVKLLLA 147 (624)
Q Consensus 92 LhlAA~~G~~eiVklLL~~~GADVN~~~d~~G~TPLH~Aa~~G~~~~~eiVklLL~ 147 (624)
|.+|+..|-++.|...|+. |.+++. ++|..|+...| ..++.+++.
T Consensus 147 l~~a~~kgll~F~letlky-gg~~~~-------~vls~Av~ynh---RkIL~yfi~ 191 (192)
T PF03158_consen 147 LEKAAAKGLLPFVLETLKY-GGNVDI-------IVLSQAVKYNH---RKILDYFIR 191 (192)
T ss_pred HHHHHHCCCHHHHHHHHHc-CCcccH-------HHHHHHHHhhH---HHHHHHhhc
Confidence 6789999999999999988 777764 59999999999 899888864
No 159
>KOG2333 consensus Uncharacterized conserved protein [General function prediction only]
Probab=39.32 E-value=19 Score=40.62 Aligned_cols=59 Identities=29% Similarity=0.401 Sum_probs=35.6
Q ss_pred ccccCCC------ccCCCCccCCCCCCCcccccCCCCCCcccccCCCCCC-CCcCCCCCccccc--cccce
Q 006947 267 KVRPCSR------AYSHDWTECPFVHPGENARRRDPRKFHYSCVPCPDFR-KGACRRGDMCEYA--HGVFE 328 (624)
Q Consensus 267 Kt~pC~r------~~sh~w~~Cpf~H~~~~~rRr~p~~~~y~~~~C~~~~-~g~C~~gd~C~~a--H~~~E 328 (624)
+.+.|+. ..|.-.+.|-|.|.-+--.-. |--=....||-|. .|.|++|-+|.|+ |-..|
T Consensus 75 ~n~LCPsli~g~~~~C~f~d~Crf~HDi~ayLat---K~~Dig~~Cp~f~s~G~Cp~G~~CRFl~aHld~~ 142 (614)
T KOG2333|consen 75 QNRLCPSLIQGDISKCSFGDNCRFVHDIEAYLAT---KAPDIGPSCPVFESLGFCPYGFKCRFLGAHLDIE 142 (614)
T ss_pred hhccChHhhcCCCccCcccccccccccHHHHHhc---cCcccCCccceeeccccCCccceeehhhcccCcc
Confidence 4567873 235566667777733211111 1112335699995 5999999999995 55544
No 160
>KOG2202 consensus U2 snRNP splicing factor, small subunit, and related proteins [RNA processing and modification]
Probab=33.32 E-value=19 Score=37.46 Aligned_cols=27 Identities=26% Similarity=0.733 Sum_probs=23.8
Q ss_pred cccccCCCCCCCCcCCCCCcccccccc
Q 006947 300 HYSCVPCPDFRKGACRRGDMCEYAHGV 326 (624)
Q Consensus 300 ~y~~~~C~~~~~g~C~~gd~C~~aH~~ 326 (624)
.++-..|..|..+.|.+|..|.|-|-.
T Consensus 149 ~~rea~C~~~e~~~C~rG~~CnFmH~k 175 (260)
T KOG2202|consen 149 DFREAICGQFERTECSRGGACNFMHVK 175 (260)
T ss_pred chhhhhhcccccccCCCCCcCcchhhh
Confidence 556678999999999999999999986
No 161
>COG5252 Uncharacterized conserved protein, contains CCCH-type Zn-finger protein [General function prediction only]
Probab=23.77 E-value=18 Score=37.10 Aligned_cols=29 Identities=38% Similarity=0.561 Sum_probs=24.0
Q ss_pred cccccccCC--CCCCCCc-cCCCCCCCCccCc
Q 006947 336 YRTRLCKDG--TSCARRV-CFFAHTPEELRPL 364 (624)
Q Consensus 336 ykT~~C~~~--~~C~~~~-C~FaH~~~elr~~ 364 (624)
-||..|--| +.|..+. |.|+|+.+|-|..
T Consensus 83 pK~~vcalF~~~~c~kg~~ckF~h~~ee~r~~ 114 (299)
T COG5252 83 PKTVVCALFLNKTCAKGDACKFAHGKEEARKT 114 (299)
T ss_pred chhHHHHHhccCccccCchhhhhcchHHHhhh
Confidence 488889877 7898886 9999999888743
No 162
>PF10650 zf-C3H1: Putative zinc-finger domain; InterPro: IPR019607 This domain is conserved in fungi and might be a zinc-finger domain as it contains three conserved Cs and an H in the C-x8-C-x5-C-x3-H conformation typical of a zinc-finger.
Probab=21.89 E-value=58 Score=21.58 Aligned_cols=19 Identities=37% Similarity=0.835 Sum_probs=10.5
Q ss_pred CCCCCCCC-cCCCCCcccccc
Q 006947 305 PCPDFRKG-ACRRGDMCEYAH 324 (624)
Q Consensus 305 ~C~~~~~g-~C~~gd~C~~aH 324 (624)
+|+..-.| .|... .|.|-|
T Consensus 2 lC~yEl~Gg~Cnd~-~C~~QH 21 (23)
T PF10650_consen 2 LCPYELTGGVCNDP-DCEFQH 21 (23)
T ss_pred CCccccCCCeeCCC-CCCccc
Confidence 45555444 66553 566666
Done!