Query 006949
Match_columns 624
No_of_seqs 387 out of 1521
Neff 5.7
Searched_HMMs 13730
Date Mon Mar 25 13:13:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006949.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/006949hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d3d7ca1 a.29.2.1 (A:731-832) G 99.9 3.4E-27 2.5E-31 207.0 11.6 100 204-305 2-101 (102)
2 d3dwya1 a.29.2.1 (A:1084-1197) 99.9 4E-27 2.9E-31 210.5 12.0 109 202-310 4-113 (114)
3 d1e6ia_ a.29.2.1 (A:) GCN5 {Ba 99.9 3.8E-27 2.7E-31 209.7 10.1 101 205-307 4-104 (111)
4 d1wuma1 a.29.2.1 (A:715-832) P 99.9 2E-26 1.4E-30 207.2 12.0 104 201-306 10-113 (118)
5 d1eqfa1 a.29.2.1 (A:1359-1497) 99.9 4.3E-26 3.1E-30 210.6 13.6 106 203-310 25-130 (139)
6 d1eqfa2 a.29.2.1 (A:1498-1625) 99.9 3.2E-25 2.3E-29 202.0 9.7 95 214-310 20-114 (128)
7 d2jb0b1 d.4.1.1 (B:449-572) DN 9.0 98 0.0071 25.7 3.1 29 250-278 30-58 (124)
8 d2gykb1 d.4.1.1 (B:4-133) DNas 8.3 1.1E+02 0.0078 25.7 3.1 31 250-280 33-63 (130)
9 d2p8ta2 d.74.4.2 (A:83-199) Hy 7.8 37 0.0027 27.9 -0.2 32 224-255 1-32 (117)
10 d1cg2a2 d.58.19.1 (A:214-326) 7.5 1.1E+02 0.0079 23.7 2.7 30 394-423 65-94 (113)
No 1
>d3d7ca1 a.29.2.1 (A:731-832) GCN5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.94 E-value=3.4e-27 Score=207.01 Aligned_cols=100 Identities=34% Similarity=0.610 Sum_probs=96.4
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCcCCCCccccCCCCcccccCCCCCHHHHHHHHhCCCCCCHHHHHHHHHHHhhhhhhcCC
Q 006949 204 MLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNP 283 (624)
Q Consensus 204 ~l~k~c~~IL~~L~~~~~a~~F~~PVd~~k~~~PdYy~iIk~PMDL~tIkkKL~~~~Y~s~~eF~~DvrLIf~NA~~YN~ 283 (624)
++...|..||..|++|+.+++|..||++. .+||||++|++||||+||++||++|.|.++.+|.+||+|||.||++||+
T Consensus 2 ~L~~~l~~il~~l~~~~~s~~F~~pv~~~--~~pdY~~~I~~PmdL~tI~~kl~~~~Y~s~~~f~~D~~li~~Na~~yN~ 79 (102)
T d3d7ca1 2 QLYTTLKNLLAQIKSHPSAWPFMEPVKKS--EAPDYYEVIRFPIDLKTMTERLRSRYYVTRKLFVADLQRVIANCREYNP 79 (102)
T ss_dssp HHHHHHHHHHHHHHHSGGGGGGSSCCCTT--TSTTHHHHCSSCCCHHHHHHHHHTTCCCSHHHHHHHHHHHHHHHHHHSC
T ss_pred hHHHHHHHHHHHHHhCCCCCccCCCCChh--hCcCHHHHcCCccCHHHHHHHhccCccCCHHHHHHHHHHHHHHHHHHCC
Confidence 67899999999999999999999999965 8999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHHHH
Q 006949 284 PQNDVHIMADTLRKYFEVRWKA 305 (624)
Q Consensus 284 ~~S~V~~~A~~L~~~Fe~~~k~ 305 (624)
++|.+|.+|..|+++|+++|++
T Consensus 80 ~~s~~~~~A~~l~~~f~~~~ke 101 (102)
T d3d7ca1 80 PDSEYCRCASALEKFFYFKLKE 101 (102)
T ss_dssp TTSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999998864
No 2
>d3dwya1 a.29.2.1 (A:1084-1197) CREB-binding protein, CBP {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.94 E-value=4e-27 Score=210.52 Aligned_cols=109 Identities=36% Similarity=0.556 Sum_probs=103.4
Q ss_pred hHHHHHHHHHHHHHHHcC-CCCCCCcCCCCccccCCCCcccccCCCCCHHHHHHHHhCCCCCCHHHHHHHHHHHhhhhhh
Q 006949 202 NAMLMKQCENLLTRLMSH-QFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMT 280 (624)
Q Consensus 202 ~~~l~k~c~~IL~~L~~~-~~a~~F~~PVd~~k~~~PdYy~iIk~PMDL~tIkkKL~~~~Y~s~~eF~~DvrLIf~NA~~ 280 (624)
..++.+.|..+|+.|+++ +.+++|..|||+...++||||++|++||||+||++||++|.|.++.+|.+||+|||+||++
T Consensus 4 p~el~~~l~~~l~~l~~~~p~a~pF~~pvd~~~~~~pdY~~iI~~PmdL~tI~~kl~~~~Y~s~~ef~~Dv~li~~Na~~ 83 (114)
T d3dwya1 4 PEELRQALMPTLEALYRQDPESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVDDVWLMFNNAWL 83 (114)
T ss_dssp HHHHHHHHHHHHHHHHTCTTTTGGGSSCCCHHHHTCTTHHHHCSSCCCHHHHHHHHHTTCCSSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCcCCCccCCCCChhhccCCCHHHHcCCCCCHHHHHHHHHcCccccHHHHHHHHHHHHHHHHH
Confidence 467899999999999987 5899999999998889999999999999999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHHHhhC
Q 006949 281 YNPPQNDVHIMADTLRKYFEVRWKAIEKKL 310 (624)
Q Consensus 281 YN~~~S~V~~~A~~L~~~Fe~~~k~i~~~~ 310 (624)
||+++|.+|.+|..|++.|++.+..+...+
T Consensus 84 yN~~~s~~~~~A~~L~~~f~~~~~~i~~~~ 113 (114)
T d3dwya1 84 YNRKTSRVYKFCSKLAEVFEQEIDPVMQSL 113 (114)
T ss_dssp HSCTTSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HCCCCCHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999886543
No 3
>d1e6ia_ a.29.2.1 (A:) GCN5 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.94 E-value=3.8e-27 Score=209.71 Aligned_cols=101 Identities=36% Similarity=0.598 Sum_probs=97.2
Q ss_pred HHHHHHHHHHHHHcCCCCCCCcCCCCccccCCCCcccccCCCCCHHHHHHHHhCCCCCCHHHHHHHHHHHhhhhhhcCCC
Q 006949 205 LMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPP 284 (624)
Q Consensus 205 l~k~c~~IL~~L~~~~~a~~F~~PVd~~k~~~PdYy~iIk~PMDL~tIkkKL~~~~Y~s~~eF~~DvrLIf~NA~~YN~~ 284 (624)
+.+.|..||+.|++|+.+|+|..|||+. .+|+||++|++||||+||++||.+|.|.++.+|.+||+|||.||++||++
T Consensus 4 ~~~~l~~il~~l~~~~~a~pF~~pvd~~--~~pdY~~vI~~PmdL~tI~~kl~~~~Y~s~~~f~~Dv~li~~Na~~yN~~ 81 (111)
T d1e6ia_ 4 HDAAIQNILTELQNHAAAWPFLQPVNKE--EVPDYYDFIKEPMDLSTMEIKLESNKYQKMEDFIYDARLVFNNCRMYNGE 81 (111)
T ss_dssp THHHHHHHHHHHHHSTTCGGGSSCCCTT--TSTTHHHHCSSCCCHHHHHHHHHTTCCSSHHHHHHHHHHHHHHHHHHSCT
T ss_pred HHHHHHHHHHHHHhCCCChhhcCCCCch--hCcCHHHHcCCchhHHHHHHHHHccccchHHHHHHHHHHHHHHHHHHCCC
Confidence 4789999999999999999999999976 79999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHH
Q 006949 285 QNDVHIMADTLRKYFEVRWKAIE 307 (624)
Q Consensus 285 ~S~V~~~A~~L~~~Fe~~~k~i~ 307 (624)
+|.++.+|..|++.|+++|++|.
T Consensus 82 ~s~i~~~A~~l~~~f~~~~~~ip 104 (111)
T d1e6ia_ 82 NTSYYKYANRLEKFFNNKVKEIP 104 (111)
T ss_dssp TSHHHHHHHHHHHHHHHHHHTSG
T ss_pred CCHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999998764
No 4
>d1wuma1 a.29.2.1 (A:715-832) P300/CAF histone acetyltransferase bromodomain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.93 E-value=2e-26 Score=207.21 Aligned_cols=104 Identities=32% Similarity=0.575 Sum_probs=99.8
Q ss_pred chHHHHHHHHHHHHHHHcCCCCCCCcCCCCccccCCCCcccccCCCCCHHHHHHHHhCCCCCCHHHHHHHHHHHhhhhhh
Q 006949 201 SNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMT 280 (624)
Q Consensus 201 ~~~~l~k~c~~IL~~L~~~~~a~~F~~PVd~~k~~~PdYy~iIk~PMDL~tIkkKL~~~~Y~s~~eF~~DvrLIf~NA~~ 280 (624)
....+...|..||..|++|+.+++|..||++. .+||||++|++||||+||++||.+|.|.++.+|.+||+|||+||++
T Consensus 10 ~~~~l~~~l~~il~~l~~~~~a~~F~~pv~~~--~~pdY~~iI~~PmdL~~I~~kl~~~~Y~s~~ef~~Dv~li~~Na~~ 87 (118)
T d1wuma1 10 DPDQLYSTLKSILQQVKSHQSAWPFMEPVKRT--EAPGYYEVIRFPMDLKTMSERLKNRYYVSKKLFMADLQRVFTNCKE 87 (118)
T ss_dssp SHHHHHHHHHHHHHHHHHSSSCHHHHSCCCSS--SSSSCTTTCSSCCCHHHHHHHHTTTCCCSSHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHhCCCcCcccCCCChh--hCcCHHHHcCChhhHHHHHHHhcccccCchHHHHHHHHHHHHHHHH
Confidence 45778999999999999999999999999965 8999999999999999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHH
Q 006949 281 YNPPQNDVHIMADTLRKYFEVRWKAI 306 (624)
Q Consensus 281 YN~~~S~V~~~A~~L~~~Fe~~~k~i 306 (624)
||+++|.+|.+|..|+++|++.|+++
T Consensus 88 yn~~~s~~~~~A~~l~~~f~~~~~e~ 113 (118)
T d1wuma1 88 YNPPESEYYKCANILEKFFFSKIKEA 113 (118)
T ss_dssp HSCTTSSHHHHHHHHHHHHHHHHHHH
T ss_pred HCCCCCHHHHHHHHHHHHHHHHHHHc
Confidence 99999999999999999999999875
No 5
>d1eqfa1 a.29.2.1 (A:1359-1497) TAFII250 double bromodomain module {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.93 E-value=4.3e-26 Score=210.58 Aligned_cols=106 Identities=25% Similarity=0.464 Sum_probs=101.0
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCcCCCCccccCCCCcccccCCCCCHHHHHHHHhCCCCCCHHHHHHHHHHHhhhhhhcC
Q 006949 203 AMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYN 282 (624)
Q Consensus 203 ~~l~k~c~~IL~~L~~~~~a~~F~~PVd~~k~~~PdYy~iIk~PMDL~tIkkKL~~~~Y~s~~eF~~DvrLIf~NA~~YN 282 (624)
..+...|..||+.|..++.+|+|..|||+. .+||||++|++||||.||++||+++.|.++.+|.+||+|||.||++||
T Consensus 25 ~~l~~~l~~il~~l~~~~~s~pF~~Pvd~~--~~pdY~~iI~~PmdL~tI~~kl~~~~Y~s~~~f~~D~~li~~Na~~yN 102 (139)
T d1eqfa1 25 VTLSSILESIINDMRDLPNTYPFHTPVNAK--VVKDYYKIITRPMDLQTLRENVRKRLYPSREEFREHLELIVKNSATYN 102 (139)
T ss_dssp HHHHHHHHHHHHHHHTSTTCGGGTSCCCTT--TSTTHHHHCSSCCCHHHHHHHHHTTCCSSHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCchhhhCCCChh--hccCHHHHcCChhhHHHHHHHHHcCCcCCHHHHHHHHHHHHHHHHHHC
Confidence 457788999999999999999999999976 799999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHhhC
Q 006949 283 PPQNDVHIMADTLRKYFEVRWKAIEKKL 310 (624)
Q Consensus 283 ~~~S~V~~~A~~L~~~Fe~~~k~i~~~~ 310 (624)
++++.+|.+|..|++.|++.|+++..++
T Consensus 103 ~~~s~i~~~A~~L~~~~~~~~~~~~~~~ 130 (139)
T d1eqfa1 103 GPKHSLTQISQSMLDLCDEKLKEKEDKL 130 (139)
T ss_dssp CTTSHHHHHHHHHHHHHHHHHHHTHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999887654
No 6
>d1eqfa2 a.29.2.1 (A:1498-1625) TAFII250 double bromodomain module {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.91 E-value=3.2e-25 Score=202.03 Aligned_cols=95 Identities=29% Similarity=0.546 Sum_probs=88.0
Q ss_pred HHHHcCCCCCCCcCCCCccccCCCCcccccCCCCCHHHHHHHHhCCCCCCHHHHHHHHHHHhhhhhhcCCCCCHHHHHHH
Q 006949 214 TRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMAD 293 (624)
Q Consensus 214 ~~L~~~~~a~~F~~PVd~~k~~~PdYy~iIk~PMDL~tIkkKL~~~~Y~s~~eF~~DvrLIf~NA~~YN~~~S~V~~~A~ 293 (624)
..|++++.+|||..||++. .+||||++|++||||+||++||.+|.|.++.+|.+||+|||+||+.||+++|.+|.+|.
T Consensus 20 ~~~~~~p~a~pF~~pVd~~--~~PdY~~vIk~PmDL~tI~~kl~~~~Y~s~~ef~~Dv~li~~Na~~yN~~~s~i~~~A~ 97 (128)
T d1eqfa2 20 QKMMAVPDSWPFHHPVNKK--FVPDYYKVIVNPMDLETIRKNISKHKYQSRESFLDDVNLILANSVKYNGPESQYTKTAQ 97 (128)
T ss_dssp HTTTTSTTCGGGTSCCCTT--TSTTHHHHCSSCCCHHHHHHHHHTTCCSSHHHHHHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHcCCCCChhcCCCCcc--cCcCHHHHcCCcccHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
Confidence 4455668899999999965 89999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhC
Q 006949 294 TLRKYFEVRWKAIEKKL 310 (624)
Q Consensus 294 ~L~~~Fe~~~k~i~~~~ 310 (624)
.|++.|++.|.++...+
T Consensus 98 ~L~~~~~~~l~~~~~~~ 114 (128)
T d1eqfa2 98 EIVNVCYQTLTEYDEHL 114 (128)
T ss_dssp HHHHHHHHHHHHTHHHH
T ss_pred HHHHHHHHHHHHhHHHH
Confidence 99999999998876543
No 7
>d2jb0b1 d.4.1.1 (B:449-572) DNase domain of colicin E7 {Escherichia coli [TaxId: 562]}
Probab=8.98 E-value=98 Score=25.74 Aligned_cols=29 Identities=14% Similarity=0.130 Sum_probs=25.8
Q ss_pred HHHHHHHhCCCCCCHHHHHHHHHHHhhhh
Q 006949 250 GTIKCKITSGQYSDPLAFAADVRLTFSNA 278 (624)
Q Consensus 250 ~tIkkKL~~~~Y~s~~eF~~DvrLIf~NA 278 (624)
..|..||+.+.|.++++|...|++-..|-
T Consensus 30 ~qIadkLrGr~F~sFd~FR~afW~~Va~D 58 (124)
T d2jb0b1 30 DRIANKLRDKEFKSFDDFRKKFWEEVSKD 58 (124)
T ss_dssp HHHHHHHTTCEESSHHHHHHHHHHHHHHC
T ss_pred HHHHHHhcCCcCCCHHHHHHHHHHHHhcC
Confidence 37999999999999999999999887664
No 8
>d2gykb1 d.4.1.1 (B:4-133) DNase domain of colicin E9 {Escherichia coli [TaxId: 562]}
Probab=8.33 E-value=1.1e+02 Score=25.68 Aligned_cols=31 Identities=16% Similarity=0.107 Sum_probs=26.7
Q ss_pred HHHHHHHhCCCCCCHHHHHHHHHHHhhhhhh
Q 006949 250 GTIKCKITSGQYSDPLAFAADVRLTFSNAMT 280 (624)
Q Consensus 250 ~tIkkKL~~~~Y~s~~eF~~DvrLIf~NA~~ 280 (624)
..|..||+.+.|.++++|...|++-..|--.
T Consensus 33 ~qIadkLrGr~F~sFd~FR~afW~~Va~Dpe 63 (130)
T d2gykb1 33 DRIADKLRDKEFKSFDDFRKAVWEEVSKDPE 63 (130)
T ss_dssp HHHHHHHTTCEESSHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHhcCCccCCHHHHHHHHHHHHhcCHH
Confidence 3799999999999999999999888776433
No 9
>d2p8ta2 d.74.4.2 (A:83-199) Hypothetical protein PH0730 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=7.78 E-value=37 Score=27.94 Aligned_cols=32 Identities=25% Similarity=0.500 Sum_probs=24.8
Q ss_pred CCcCCCCccccCCCCcccccCCCCCHHHHHHH
Q 006949 224 VFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCK 255 (624)
Q Consensus 224 ~F~~PVd~~k~~~PdYy~iIk~PMDL~tIkkK 255 (624)
.|.+|+-..-.++|.|.-|||+|=.|..|.-|
T Consensus 1 ~fse~~~v~v~g~p~~a~vVK~pp~fksi~LR 32 (117)
T d2p8ta2 1 MFSEPIGVSVDGYPGIAIVVKNPPEFKSIELR 32 (117)
T ss_dssp TBCCCEEEEETTEEEEEEEESSCCCCCHHHHH
T ss_pred CCCcceEeeecCCCceeEEeeCCcccccchhh
Confidence 37777666666999999999999877766644
No 10
>d1cg2a2 d.58.19.1 (A:214-326) Carboxypeptidase G2 {Pseudomonas sp., strain rs-16 [TaxId: 306]}
Probab=7.47 E-value=1.1e+02 Score=23.67 Aligned_cols=30 Identities=17% Similarity=0.191 Sum_probs=25.9
Q ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHHHHHH
Q 006949 394 TGEDELEIDIDALSDDTLFALRKLLDDYLL 423 (624)
Q Consensus 394 ~~~dEIEIDId~L~~~TL~eL~ryV~~~L~ 423 (624)
.+.-++++||-.++.+++-++.+.+.+++.
T Consensus 65 P~~~~~~~diR~~~~e~~~~v~~~i~~~~~ 94 (113)
T d1cg2a2 65 PASATLNADVRYARNEDFDAAMKTLEERAQ 94 (113)
T ss_dssp CSEEEEEEEEEESSHHHHHHHHHHHHHHHT
T ss_pred CCEEEEEEEEecCCHHHHHHHHHHHHHHHH
Confidence 455789999999999999999998888764
Done!